BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048179
(589 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/556 (66%), Positives = 456/556 (82%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI T + +GNS ++I Y I SAR++F++ P GVD +N++IIAYSR+ + FE
Sbjct: 30 MILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEA 89
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L LY++M E VRPDSST+TV LKAC +DL+ GEE WR+AV+ GYG+DVFVG+++LNL
Sbjct: 90 LSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNL 149
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCGKM+EAM F+KM R+DLVCW++MI GL NGQ REAVD Y++M K+ ++ D VVM
Sbjct: 150 YAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVM 209
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+GLIQAC LG S+ GLS+HGY IR+ + +DV VQTSLVDMYAK GHL+LAS VF+ M
Sbjct: 210 LGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLY 269
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+++W ALISGFAQNG AG+ L+L+++MQS G++PDSVSLVS LLAC+Q+GFLKLGKS+
Sbjct: 270 KNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSV 329
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
HGY VRR F+ V T+VIDMYSKCG S AR +FDQ+ RD ISWN IIASYGIHG GE
Sbjct: 330 HGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGE 389
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EALSLFLQM ET VKPDH+TFASLLSA SHSGLVE+GRYWF +MV++YKIQP+EKHYACM
Sbjct: 390 EALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACM 449
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL+RAG VEEA ++++SM TEPG+A+WVALLSGC NH KF IGE AKKVL+LNPDD
Sbjct: 450 VDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDP 509
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYE 540
GI++LVSNFFA ++W+EVA VRK M+K+GMKKVPGYSV+EVNG+LHAF+MEDKSH+QYE
Sbjct: 510 GIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYE 569
Query: 541 DIVYVLKKLYLEMRAI 556
+I+ VL KL EM+A+
Sbjct: 570 EIMQVLGKLDYEMKAM 585
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/547 (61%), Positives = 438/547 (80%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
NS+ ++IA YG N+I+ AR +FE++P R ++ +NS+IIAYSR P EVL LY +MI
Sbjct: 18 ANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMIS 77
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
E ++PDSSTFTV LKAC SLMDL MGE IW +AV+ GYG DVFV SS+LNLY K GKM++
Sbjct: 78 EGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDK 137
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F+KM ++D+V W++MI G +G+P +A+D Y+ M+KE + D VVM+GLIQAC
Sbjct: 138 AKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTS 197
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LGDS+FGLSVHG+ +RR +N+D +QTSL+DMYAK G L+LAS VF+ + ++++WGAL
Sbjct: 198 LGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGAL 257
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
ISGFAQNG A TL L+EMQ+ GF+PD VSL+S+L ACAQ+G LK+GKS+HG+ V+R
Sbjct: 258 ISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLY 317
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ V GT++IDMY+KCG + ARALFDQ++ RDLI WN +I+SYGIHG G EALSLFL+M
Sbjct: 318 LDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKM 377
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
ET + PDH+TFASLLSA SHSGLVEEG+YWF +++ K KIQP+EKHYACMVDLL+RAG+
Sbjct: 378 KETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQ 437
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
VEEA ++++SM +PGLA+WVALLSGC NHK IGE VAKK+L+ NPDDLGI+ LVSNF
Sbjct: 438 VEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESNPDDLGIYVLVSNF 497
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
F+M +KW++ A RK M+ +GM+KVPGYS VEVNG+L AF+MEDK+HNQY+DI+ +L L
Sbjct: 498 FSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFLMEDKNHNQYQDILQILDIL 557
Query: 550 YLEMRAI 556
EMR+I
Sbjct: 558 DNEMRSI 564
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 121/246 (49%), Gaps = 3/246 (1%)
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D L+ Y + ++ A +VF+ M + +I W ++I +++ L L M
Sbjct: 17 DANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMI 76
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
S G +PDS + L AC+ + L +G+ I V + F++ + +SV+++Y+K G
Sbjct: 77 SEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMD 136
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A+ +FD+M RD++SW +I + G +A+ ++ M + + D L+ A +
Sbjct: 137 KAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACT 196
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
G + G MV + ++ ++D+ A+ G++E A ++ + + + ++ W
Sbjct: 197 SLGDSKFGLSVHGHMVRR-EMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVIS-W 254
Query: 450 VALLSG 455
AL+SG
Sbjct: 255 GALISG 260
>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/550 (62%), Positives = 442/550 (80%), Gaps = 1/550 (0%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A N G +IA Y I SAR LF++LP RGVD +N++I+AYSR+ EVL LY+QM
Sbjct: 38 ANSNFNGLVIASYARIGGITSARHLFDKLPQRGVDAWNAMIVAYSRRYHLTEVLNLYHQM 97
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ E +PDSSTFTVA+KA SL DL+ GE IWR+AV+ GYG DVFVGSS+LNLYVKCGK+
Sbjct: 98 VNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAVDFGYGCDVFVGSSVLNLYVKCGKI 157
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+EA + F+KM ++D+VCW++MI GLV NG EAVD ++RM+KEGI+ D V+M+GL+QAC
Sbjct: 158 DEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRKEGIEGDGVLMLGLVQAC 217
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
A+LG+ + GLSVHG+++RR + +D V +QTSLVDMYAK G L+LAS VF+ M R N V+W
Sbjct: 218 ANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSW 277
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
GALISGFAQNG A L+LL+EMQS F+PD+ LVSALLAC+Q+G LKLGKSIHGY VR
Sbjct: 278 GALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVR 337
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
R F LVLGT++IDMY+KCG SCA A+FD++ SRD+I WN +IASYGIHG G+E LSLF
Sbjct: 338 RLGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLF 397
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
L+M E + PDH+TFASLLSALSHSG V+ G+YWF+ MV++ KI P+EKHYACMVDL +R
Sbjct: 398 LKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVNECKIPPSEKHYACMVDLFSR 457
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG VEEA ++++SM+TEPGLA+WVALLSGCHN++ GE AKK+L LNPDDLGI+ALV
Sbjct: 458 AGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLFGEVAAKKILDLNPDDLGIYALV 517
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SNFF++ + W+ V+ +RK M+++GMKKVPGYS VEVNG+ AF++EDK+H+QYE+I+ +L
Sbjct: 518 SNFFSLARMWDRVSILRKIMKETGMKKVPGYSAVEVNGKHEAFLVEDKNHHQYEEILQML 577
Query: 547 KKLYLEMRAI 556
L EMR I
Sbjct: 578 DSLDNEMRVI 587
>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial; Flags: Precursor
gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 601
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/553 (54%), Positives = 415/553 (75%), Gaps = 1/553 (0%)
Query: 10 GNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
G+S+ R +IA G +I ARK+F+ELP RGV YNS+I+ YSR ++P EVL LY+QMI
Sbjct: 49 GSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI 108
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
E ++PDSSTFT+ +KAC+S + L+ GE +W KAV+ GY NDVFV SS+LNLY+KCGKM+
Sbjct: 109 AEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMD 168
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
EA V F KM ++D++CW++M+ G G+ +AV+ Y+ M+ EG D VVM+GL+QA
Sbjct: 169 EAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASG 228
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
DLGD++ G SVHGY R L ++V V+TSLVDMYAK G +++AS VF M V+WG+
Sbjct: 229 DLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LISGFAQNGLA E ++EMQS GF+PD V+LV L+AC+Q+G LK G+ +H Y ++R
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ V T+++DMYSKCG S +R +F+ + +DL+ WN +I+ YGIHG+G+E +SLFL+
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M E+ ++PDH+TFASLLSALSHSGLVE+G++WF +M++KYKIQP+EKHY C++DLLARAG
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
VEEAL +++S + L +WVALLSGC NH+ S+G+ A K+L+LNPD +GI LVSN
Sbjct: 469 RVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSN 528
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
FFA KW+EVA VRK MR M+KVPGYS +EVNGEL F+MED SH+++ ++ VL+
Sbjct: 529 FFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRN 588
Query: 549 LYLEMRAISSWLQ 561
L E+R + S ++
Sbjct: 589 LKTEIRDVCSGVE 601
>gi|297791795|ref|XP_002863782.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309617|gb|EFH40041.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 590
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/548 (52%), Positives = 395/548 (72%), Gaps = 11/548 (2%)
Query: 10 GNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
G+S+ R ++ALYG +I ARK+F++LP R V YNS+I+ YSR +P EVL LY+QMI
Sbjct: 41 GSSISRDLVALYGRIGEISYARKVFDQLPQRSVSVYNSMIVVYSRGNNPNEVLKLYDQMI 100
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
E V+PDSSTFT+ +KAC+S M L+ GE +W KAVE GY NDVFV SS+LNLY+KCGKMN
Sbjct: 101 SERVKPDSSTFTITIKACLSGMALEKGEAVWSKAVEFGYKNDVFVCSSVLNLYMKCGKMN 160
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
EA V F KM ++D++CW++M+ G G+ +AV+ Y+ M+ EG D VVM+GL+QA
Sbjct: 161 EAEVLFRKMTKRDVICWTTMVTGFAQGGKSMKAVEFYREMQNEGFGRDRVVMLGLLQASG 220
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
DLGD + G SVHGY IR L ++ V+TSLVDMYAK G +++A +F M VTWG+
Sbjct: 221 DLGDPKMGRSVHGYLIRTGLPMNTVVETSLVDMYAKVGFIEVAFRMFSRMMFKTAVTWGS 280
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LISGFAQNGLA E ++EMQS GF+ D +LV L+AC+Q+G L G S+H Y ++R
Sbjct: 281 LISGFAQNGLANYAFEAVLEMQSLGFQLDLATLVGVLVACSQVGSLTTGISVHCYILKRH 340
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + T+++DMYSKCG S +R +F+ + +DL+ WN +I+ +S+FL+
Sbjct: 341 VLDRITATALMDMYSKCGALSSSRVIFEHVGRKDLVCWNTMIS----------FVSMFLK 390
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M ET ++PDH+TFASLLSALSHSGLVE+G++WF +M++KY IQP+EKHY C++DLLARAG
Sbjct: 391 MTETNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYNIQPSEKHYVCLIDLLARAG 450
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
VEEAL +++S + L +WVALLSGC NH+ S+G+ A K+L+LNPD GI LV N
Sbjct: 451 RVEEALDMINSAKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSTGIQTLVCN 510
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
FFA +KW EVA VRK MR M+KVPG SV+E+NG+L F+MED +H+++ I+ VL+
Sbjct: 511 FFATARKWTEVAKVRKLMRNGAMEKVPGQSVIEMNGQLRTFLMEDLNHHEHAHILQVLRN 570
Query: 549 LYLEMRAI 556
L EM+ +
Sbjct: 571 LNSEMKNV 578
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 1/290 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
N + ++ LY + G+++ A F+++ ++ + ++SMI P E + Y +M
Sbjct: 40 NGSSISRDLVALYGRIGEISYARKVFDQLPQRSVSVYNSMIVVYSRGNNPNEVLKLYDQM 99
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
E + D I+AC G +V ++ DV V +S++++Y K G +
Sbjct: 100 ISERVKPDSSTFTITIKACLSGMALEKGEAVWSKAVEFGYKNDVFVCSSVLNLYMKCGKM 159
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A +F+ M++ +++ W +++GFAQ G + +E EMQ+ GF D V ++ L A
Sbjct: 160 NEAEVLFRKMTKRDVICWTTMVTGFAQGGKSMKAVEFYREMQNEGFGRDRVVMLGLLQAS 219
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+G K+G+S+HGY +R N V+ TS++DMY+K G A +F +M + ++W
Sbjct: 220 GDLGDPKMGRSVHGYLIRTGLPMNTVVETSLVDMYAKVGFIEVAFRMFSRMMFKTAVTWG 279
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+I+ + +G A L+M + D +T +L A S G + G
Sbjct: 280 SLISGFAQNGLANYAFEAVLEMQSLGFQLDLATLVGVLVACSQVGSLTTG 329
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/514 (54%), Positives = 378/514 (73%), Gaps = 1/514 (0%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+ +N+++ A SR SP L ++ + + RPDS+TFT+AL AC L DL E +
Sbjct: 77 IPAWNALLAARSRAGSPGAALRVF-RALPSSARPDSTTFTLALTACARLGDLDAAEAVRV 135
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A GYG DVFV S++L++Y +CG M +A+ F+ M RKD V WS+M+ G V G+P E
Sbjct: 136 RAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVE 195
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ Y RM++ G+ DEVVM+G+IQAC G++R G SVHG +R + +DV + TSLVD
Sbjct: 196 ALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVD 255
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MYAK GH D+A VF+ M N V+W ALISGFAQNG A L+L EM + G +PDS +
Sbjct: 256 MYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGA 315
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
LVSALLACA +GFLKLGKSIHG+ +RR +F +LGT+V+DMYSKCG AR LF+++ S
Sbjct: 316 LVSALLACADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSS 375
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RDL+ WN +IA G HG G +AL+LF ++ ET +KPDH+TFASLLSALSHSGLVEEG++W
Sbjct: 376 RDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 435
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
FD M++++ I+PTEKH C+VDLLAR+G VEEA +++ SM TEP + +WVALLSGC N+K
Sbjct: 436 FDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNK 495
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
K +GE +AKK+L+ P+D+G+ ALVSN +A +KW++V +RK M+ SG KKVPGYS++
Sbjct: 496 KLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 555
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
EV+G HAF+MED+SH Q+++I+ ++ KL EMR
Sbjct: 556 EVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMR 589
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 172/356 (48%), Gaps = 7/356 (1%)
Query: 2 IKTNLSAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
++ + YG V ++ +Y + A ++F+ +P + +++++ + P
Sbjct: 135 VRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPV 194
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E LG+Y++M + V D ++AC + +MG + + + G DV + +S++
Sbjct: 195 EALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLV 254
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y K G + A F M ++ V W+++I+G NG EA+D ++ M G+ D
Sbjct: 255 DMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSG 314
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ + ACAD+G + G S+HG+ +RR L + T+++DMY+K G L+ A +F +
Sbjct: 315 ALVSALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKL 373
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
S ++V W A+I+ +G L L E+ G +PD + S L A + G ++ GK
Sbjct: 374 SSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 433
Query: 299 SIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIA 351
+ F V+D+ ++ G+ A + M + I W +++
Sbjct: 434 FWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLS 489
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/513 (54%), Positives = 374/513 (72%), Gaps = 1/513 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N ++ A+SR +P L ++ + + RP+S+TFT+ L AC L DL E + +A
Sbjct: 76 WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
GYG+DVFV S++L+LY +CG M EA+ F+ M RKD V WS+M+ G V G+P EA+
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y RM++ G+ DEVVM+G+IQAC G++R G SVHG +R + +DV TSLV MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K GHLD+A VF+ M N VTW ALISGFAQNG A L+L E+Q+ G +P S +LVS
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
ALLACA +GFLKLGKSIHG+ +RR ++ +LGT+V+DMYSKCG AR LF+++ SRDL
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 374
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+ WN IIA G HG G +AL+LF ++ ET +KPDH+TFASLLSALSHSGLVEEG++WFD
Sbjct: 375 VLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDR 434
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
M+ ++ I+P EKHY C+VDLLAR+G VEEA ++ SM TEP +A+WV LLSGC N+KK
Sbjct: 435 MIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLE 494
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+GE +AKK+L+L P+D+G+ ALVSN +A +KW++V +RK M+ SG KKVPGYS++EV
Sbjct: 495 LGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVK 554
Query: 524 GELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
G HAF+MED+SH Q+ +I+ ++ KL EMR +
Sbjct: 555 GTRHAFVMEDQSHPQHREILKMVAKLNSEMRKL 587
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 177/356 (49%), Gaps = 6/356 (1%)
Query: 2 IKTNLSAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
++ + YG+ V ++ LY + A ++F+ +P + +++++ + P
Sbjct: 131 VRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPV 190
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L +Y++M + V D ++AC+S + ++G + + + DV +S++
Sbjct: 191 EALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLV 250
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y K G ++ A F M ++ V WS++I+G NG+ EA+D ++ ++ +G+
Sbjct: 251 SMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSW 310
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ + ACA +G + G S+HG+ +RR L + T+++DMY+K G L+ A +F +
Sbjct: 311 ALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKL 369
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
S ++V W A+I+ +G L L E+ G +PD + S L A + G ++ GK
Sbjct: 370 SSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 429
Query: 299 SIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
++ F ++D+ ++ G+ A + MQ+ I+ VI+ S
Sbjct: 430 FWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLS 485
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/504 (54%), Positives = 366/504 (72%), Gaps = 1/504 (0%)
Query: 51 YSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
+SR+ SP L ++ + + RPDS+TFT+AL AC L DL+ GE + +A + GY +D
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
VFV SS+L+LY + G M +A+ F++M R+D V WS+M+ G V GQP +A+ Y+RM++
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
+G+ DEVVM+G+IQAC + R G SVHG+ +R + +DV TSLVDMYAK G LD+
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF M N V+W A+ISGFAQNG + L L MQ+ G +PDS +LVSALLAC+
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
IGFLKLG+S+HG+ VRRFDFN +LGT+ IDMYSKCG + A+ LF+ + RDLI WN +I
Sbjct: 323 IGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A G HG G++AL+LF +M ET ++PDH+TFASLLSALSHSGLVEEG+ WF MV+ +KI
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKI 442
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P EKHY C+VDLLAR+G VEEA ++ SM EP +A+WVALLSGC N+KK +GE +A
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
+L+L PDD+G+ ALVSN +A +KW++V VRK M+ SG KK+PG S +E+ G HAF+
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFL 562
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMR 554
MED+SH Q E+IV + KL LEMR
Sbjct: 563 MEDQSHPQREEIVSKVAKLDLEMR 586
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/504 (54%), Positives = 364/504 (72%), Gaps = 1/504 (0%)
Query: 51 YSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
+SR+ SP L ++ + + RPDS+TFT+AL AC L DL+ GE + +A + GY +D
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
VFV SS+L+LY + G M +A+ F +M R+D V WS+M+ G V GQP +A+ Y+RM++
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
+G+ DEVVM+G+IQAC + R G SVHG+ +R + +DV TSLVDMYAK G LD+
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF M N V+W A+ISGFAQNG + L L MQ+ G +PDS +LVSALLAC+
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
IGFLKLG+S+HG+ VRRFDFN +LGT+ IDMYSKCG + A+ LF+ + RDLI WN +I
Sbjct: 323 IGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A G HG G++AL+LF +M ET ++PDH+TFASLLSALSHSGLVEEG+ WF MV+ +KI
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P EKHY C+VDLLAR+G VEEA ++ SM EP +A+WVALLSGC N+KK +GE +A
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
+L+L PDD+G+ ALVSN +A +KW++V VRK M+ SG KK+PG S +E+ G H F+
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFV 562
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMR 554
MED+SH Q E+IV + KL LEMR
Sbjct: 563 MEDQSHPQREEIVSKVAKLDLEMR 586
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/504 (54%), Positives = 364/504 (72%), Gaps = 1/504 (0%)
Query: 51 YSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
+SR+ SP L ++ + + RPDS+TFT+AL AC L DL+ GE + +A + GY +D
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
VFV SS+L+LY + G M +A+ F +M R+D V WS+M+ G V GQP +A+ Y+RM++
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
+G+ DEVVM+G+IQAC + R G SVHG+ +R + +DV TSLVDMYAK G LD+
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF M N V+W A+ISGFAQNG + L L MQ+ G +PDS +LVSALLAC+
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
IGFLKLG+S+HG+ VRRFDFN +LGT+ IDMYSKCG + A+ LF+ + RDLI WN +I
Sbjct: 323 IGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A G HG G++AL+LF +M ET ++PDH+TFASLLSALSHSGLVEEG+ WF MV+ +KI
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P EKHY C+VDLLAR+G VEEA ++ SM EP +A+WVALLSGC N+KK +GE +A
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
+L+L PDD+G+ ALVSN +A +KW++V VRK M+ SG KK+PG S +E+ G H F+
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFV 562
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMR 554
MED+SH Q E+IV + KL LEMR
Sbjct: 563 MEDQSHPQREEIVSKVAKLDLEMR 586
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/537 (50%), Positives = 373/537 (69%), Gaps = 3/537 (0%)
Query: 20 YGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSS 77
Y D+ +A P + +N+++ A+SR SP E L ++ + + RPDS+
Sbjct: 46 YARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-RALPPAARPDST 104
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TFT+AL AC L DL GE + +A GYGND+FV SS+LNLY KCG M++A+ F++M
Sbjct: 105 TFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRM 164
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+++D V WS+M+ G V GQP +A++ Y RM+++G++ADEVV++G++QACA GD+R G
Sbjct: 165 RKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGA 224
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
SVHGY +R + +DV + TSLVDMYAK G D A VF+ M N V+W ALIS AQ G
Sbjct: 225 SVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYG 284
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS 317
A L L MQ G P+S +V ALLAC+ +G LKLGKSIHG+ +R + + ++GT+
Sbjct: 285 NADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMVGTA 344
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
VIDMYSKCG S A+ LFD++ SRDLISWNV+IA G HG G +ALSLF +M V+PD
Sbjct: 345 VIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPD 404
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
H+TFASLLSALSHSGLVEEG++WF+ MV++Y I+P EKH C+VDLLAR+G VEEA +V
Sbjct: 405 HATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLV 464
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
S+ ++P +++ VALLSGC N+ K +GE A+K+L+L P D+G+ ALVSN +A + W
Sbjct: 465 ASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWY 524
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+V VRK M+ G KK PG S +E+ G LH F+MED+SH Q+ I+ ++ KL EMR
Sbjct: 525 KVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMR 581
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 176/354 (49%), Gaps = 12/354 (3%)
Query: 7 SAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
+ YGN + ++ LY + A K+F+ + R T+++++ + P + + +
Sbjct: 132 AGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEM 191
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
Y +M ++ + D ++AC + D +MG + + DV + +S++++Y K
Sbjct: 192 YMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAK 251
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
G ++A FE M ++ V WS++I+ L G EA+ ++ M+ G+ + ++G
Sbjct: 252 NGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGA 311
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ AC+DLG + G S+HG+ I R L LD V T+++DMY+K G L A +F + ++
Sbjct: 312 LLACSDLGLLKLGKSIHGF-ILRTLELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDL 370
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK----- 298
++W +I+ +G L L EM+ PD + S L A + G ++ GK
Sbjct: 371 ISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNC 430
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
++ Y + + +LV ++D+ ++ G+ A L + S+ IS V + S
Sbjct: 431 MVNEYGIEPGEKHLV---CIVDLLARSGLVEEANGLVASLHSKPTISILVALLS 481
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/544 (41%), Positives = 352/544 (64%), Gaps = 2/544 (0%)
Query: 13 VGRIIA-LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
VG +A +Y + +AR++F+ +P R V ++N+II YS+ P+E L L+++M
Sbjct: 157 VGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNG 216
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
++P+SST + C L+ L+ G++I A+ G +DV V + ++N+Y KCG +N A
Sbjct: 217 IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAH 276
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE+M +D+ W+++I G N Q EA+ + RM+ GI + + M+ ++ ACA L
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLF 336
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HGY+IR + V +LV+MYAK G+++ A +F+ M + N+V W A+IS
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS 396
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G++Q+G L L +EMQ+ G +PDS ++VS L ACA L+ GK IHGYT+R F+
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+V+GT ++D+Y+KCG + A+ LF++M +D++SW +I +YGIHGHGE+AL+LF +M
Sbjct: 457 NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ 516
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
ET K DH F ++L+A SH+GLV++G +F M S Y + P +HYAC+VDLL RAG +
Sbjct: 517 ETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHL 576
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA I+ +MS EP VW ALL C H +GE+ AK + +L+PD+ G + L+SN +
Sbjct: 577 DEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIY 636
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A Q+WE+VA +RK M++ G+KK PG SVV V+ ++ F++ D++H Q E I +L+ LY
Sbjct: 637 AEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILY 696
Query: 551 LEMR 554
+MR
Sbjct: 697 EQMR 700
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 234/423 (55%), Gaps = 13/423 (3%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+ II Y + + L LY QM + + PD F +KAC S DL+ G ++ +
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G+ +DV VG+++ ++Y KCG + A F++M ++D+V W+++I G NGQP EA+
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ M+ GI + ++ ++ CA L G +H Y+IR + DV V LV+MYA
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA 267
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G+++ A +F+ M ++ +W A+I G++ N L MQ G +P+S+++VS
Sbjct: 268 KCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVS 327
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L ACA + L+ G+ IHGY +R F+ N V+G ++++MY+KCG + A LF++M ++
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKN 387
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+++WN II+ Y HGH EAL+LF++M +KPD S+L A +H +E+G+
Sbjct: 388 VVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK---- 443
Query: 403 LMVSKYKIQPTEKHYAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGC 456
+ Y I+ + +VD+ A+ G V A K+ + M E + W ++ G
Sbjct: 444 -QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGI 501
Query: 457 HNH 459
H H
Sbjct: 502 HGH 504
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 196/362 (54%), Gaps = 8/362 (2%)
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
R + V W I G V NG +A+ Y +M++ GI+ D++V + +I+AC D + G
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH I R DV V T+L MY K G L+ A VF M + ++V+W A+I+G++QNG
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L L EMQ G +P+S +LVS + CA + L+ GK IH Y +R + ++++
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+++MY+KCG + A LF++M RD+ SWN II Y ++ EAL+ F +M +KP+
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T S+L A +H +E+G+ + + + + +V++ A+ G V A K+
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAI-RSGFESNDVVGNALVNMYAKCGNVNSAYKLF 380
Query: 438 DSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALV---SNFFAM 492
+ M + + W A++SG H H ++ + + + PD I +++ ++F A+
Sbjct: 381 ERMPKK-NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 493 EQ 494
EQ
Sbjct: 440 EQ 441
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 333/556 (59%), Gaps = 1/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I + +A ++ ++ +Y I A K+F+ +P R + ++N+II +S+ +
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L +M E RPDS T L A + L +G+ I A+ G+ V + +++ ++
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A + F+ M +K +V W+SM++G V NG+P +A+ +++M +EGID V +
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
M + ACADLGD G VH + + +L D+ V SL+ MY+K +D+AS +F N++
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
V+W A+I G+AQNG L EM+S G +PDS ++VS + A A++ + K I
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG +R D N+ + T+++DMYSKCG AR LFD + R +I+WN +I YG HG G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
AL LF +M + V+P+ T+ S++SA SHSGLV+EG F M Y ++P+ HY
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG ++EA +++M PG+ V+ A+L C HK +GEK AKK+ +LNPD+
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDE 652
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G H L++N +A KW +VA VRKTM K G+KK PG SVVE+ E+H+F +H Q
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712
Query: 540 EDIVYVLKKLYLEMRA 555
+ I L++L E++A
Sbjct: 713 KRIYAFLEELVYEIKA 728
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 237/446 (53%), Gaps = 3/446 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++L+ I A ++FE + + Y++++ Y++ S L +M +DV+P
Sbjct: 86 KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT LK C DLK G+EI + + + +VF + ++N+Y KC ++++A F
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DLV W+++I G NG ++A++ RM+ EG D + ++ ++ A AD+G
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G S+HGY+IR V + T+L DMY+K G ++ A +F M + +V+W +++ G+
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QNG + + +M G +P V+++ AL ACA +G L+ GK +H + + ++
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MYSKC A +F+ + R +SWN +I Y +G EAL+ F +M
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD T S++ AL+ + + W ++ + + +VD+ ++ G + A
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAK-WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
K+ D M ++ + W A++ G H
Sbjct: 505 RKLFD-MISDRHVITWNAMIDGYGTH 529
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 4/320 (1%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
V L+ C S+ +L +I ++ G N+ + +++L+ K G +NEA FE + K
Sbjct: 54 VLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ +M+ G N A+ RM+ + + L++ C D D + G +H
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G I +V T +V+MYAK +D A +F M ++V+W +I+GF+QNG A
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVI 319
LEL++ MQ G PDS++LV+ L A A +G L +GKSIHGY +R LV + T++
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMYSKCG AR +FD M + ++SWN ++ Y +G E+A+++F +M+E + P
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 380 TFASLLSALSHSGLVEEGRY 399
T L A + G +E G++
Sbjct: 351 TIMEALHACADLGDLERGKF 370
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 314/541 (58%), Gaps = 1/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY I A K+FE +P R + ++N+++ Y++ + + QM + +PD
Sbjct: 183 VVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPD 242
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A L L++G I A G+ V V ++ML+ Y KCG + A + F+
Sbjct: 243 SITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFK 302
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +++V W++MI+G NG+ EA + +M EG++ V MMG + ACA+LGD
Sbjct: 303 GMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLER 362
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + + DV V SL+ MY+K +D+A+ VF N+ +VTW A+I G+AQ
Sbjct: 363 GRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQ 422
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVL 314
NG L L EMQS +PDS +LVS + A A + + K IHG +R D N+ +
Sbjct: 423 NGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFV 482
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T++ID ++KCG AR LFD MQ R +I+WN +I YG +GHG EAL LF +M V
Sbjct: 483 CTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSV 542
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF S+++A SHSGLVEEG Y+F+ M Y ++PT HY MVDLL RAG +++A
Sbjct: 543 KPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAW 602
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K + M +PG+ V A+L C HK +GEK A ++ L+PDD G H L++N +A
Sbjct: 603 KFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASAS 662
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W++VA VR M K G++K PG S+VE+ E+H F +H Q + I L+ L EM+
Sbjct: 663 MWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMK 722
Query: 555 A 555
A
Sbjct: 723 A 723
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 244/444 (54%), Gaps = 7/444 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I+L+ N I A ++FE + + Y++++ Y++ + + + Y +M ++V P
Sbjct: 81 KLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMP 140
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT L+ +DL+ G EI + G+ +++F ++++NLY KC ++ +A F
Sbjct: 141 VVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMF 200
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+M ++DLV W++++ G NG R AV +M++ G D + ++ ++ A ADL R
Sbjct: 201 ERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALR 260
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G S+HGY+ R V V T+++D Y K G + A VFK MS N+V+W +I G+A
Sbjct: 261 IGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYA 320
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLV 313
QNG + ++M G EP +VS++ AL ACA +G L+ G+ +H ++ F++
Sbjct: 321 QNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS 380
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MYSKC A ++F ++ + +++WN +I Y +G EAL+LF +M
Sbjct: 381 VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHD 440
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVE 431
+KPD T S+++AL+ + + ++ L + + + + C ++D A+ G ++
Sbjct: 441 IKPDSFTLVSVITALADLSVTRQAKWIHGLAI---RTLMDKNVFVCTALIDTHAKCGAIQ 497
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A K+ D M E + W A++ G
Sbjct: 498 TARKLFDLMQ-ERHVITWNAMIDG 520
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 226/439 (51%), Gaps = 18/439 (4%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
+ L+ C SL +L +I ++ G+ N+ + +++L+ K + EA FE ++ K
Sbjct: 49 ILLELCTSLKEL---HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHK 105
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
V + +M+ G N R+AV Y+RM+ + + L+Q + D R G +H
Sbjct: 106 LDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G I ++ T++V++YAK ++ A +F+ M + ++V+W +++G+AQNG A
Sbjct: 166 GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
++++++MQ G +PDS++LVS L A A + L++G+SIHGY R F++ + + T+++
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
D Y KCG AR +F M SR+++SWN +I Y +G EEA + FL+M++ V+P +
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
+ L A ++ G +E GRY L+ K KI ++ + ++ V+ A + +
Sbjct: 346 SMMGALHACANLGDLERGRYVHRLLDEK-KIGFDVSVMNSLISMYSKCKRVDIAASVFGN 404
Query: 440 MSTEPGLAVWVALL-----SGCHNHKKFSIGEKVAKKVLKLNPDDLG----IHALVSNFF 490
+ + + W A++ +GC N E + + PD I AL
Sbjct: 405 LKHKT-VVTWNAMILGYAQNGCVNEALNLFCEMQSHDI---KPDSFTLVSVITALADLSV 460
Query: 491 AMEQKWEEVAGVRKTMRKS 509
+ KW +R M K+
Sbjct: 461 TRQAKWIHGLAIRTLMDKN 479
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 331/556 (59%), Gaps = 1/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I + +A ++ ++ +Y I A K+F+ +P R + ++N+II +S+ +
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L +M E RPDS T L A + L +G+ I A+ G+ V + +++ ++
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A + F+ M +K +V W+SM++G V NG+P +A+ +++M +EGID V +
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
M + ACADLGD G VH + + +L D+ V SL+ MY+K +D+AS +F N++
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
V+W A+I G+AQNG L EM+S G +PDS ++VS + A A++ + K I
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG +R D N+ + T+++DMYSKCG AR LFD + R +I+WN +I YG HG G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
AL LF +M + V+P+ T+ S++SA SHSGLV+EG F M Y ++P+ HY
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG ++EA +++M PG+ V+ A C HK +GEK AKK+ +LNPD+
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDE 652
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G H L++N +A KW +VA VRKTM K G+KK PG SVVE+ E+H+F +H Q
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712
Query: 540 EDIVYVLKKLYLEMRA 555
+ I L++L E++A
Sbjct: 713 KRIYAFLEELVYEIKA 728
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 237/446 (53%), Gaps = 3/446 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++L+ I A ++FE + + Y++++ Y++ S L +M +DV+P
Sbjct: 86 KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT LK C DLK G+EI + + + +VF + ++N+Y KC ++++A F
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DLV W+++I G NG ++A++ RM+ EG D + ++ ++ A AD+G
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G S+HGY+IR V + T+L DMY+K G ++ A +F M + +V+W +++ G+
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QNG + + +M G +P V+++ AL ACA +G L+ GK +H + + ++
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MYSKC A +F+ + R +SWN +I Y +G EAL+ F +M
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD T S++ AL+ + + W ++ + + +VD+ ++ G + A
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAK-WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
K+ D M ++ + W A++ G H
Sbjct: 505 RKLFD-MISDRHVITWNAMIDGYGTH 529
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 4/320 (1%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
V L+ C S+ +L +I ++ G N+ + +++L+ K G +NEA FE + K
Sbjct: 54 VLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ +M+ G N A+ RM+ + + L++ C D D + G +H
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G I +V T +V+MYAK +D A +F M ++V+W +I+GF+QNG A
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVI 319
LEL++ MQ G PDS++LV+ L A A +G L +GKSIHGY +R LV + T++
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMYSKCG AR +FD M + ++SWN ++ Y +G E+A+++F +M+E + P
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 380 TFASLLSALSHSGLVEEGRY 399
T L A + G +E G++
Sbjct: 351 TIMEALHACADLGDLERGKF 370
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 328/530 (61%), Gaps = 3/530 (0%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
+ +Y N A KLF+E+P R V ++N++I Y + P + L L+ +M +PDS
Sbjct: 340 VGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDS 399
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
T T + +C L+DL+ G+EI + V G+ D FV S+++++Y KCG + A FE+
Sbjct: 400 VTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQ 459
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+QRK++V W+SMI G G + ++ ++RM +EGI + ++ AC+ + + G
Sbjct: 460 IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLG 519
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+HGY IR + D+ V +SL+D+Y K G++ A +VF+NM + N+V+W +ISG+ +
Sbjct: 520 KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKV 579
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLG 315
G L + +M+ G +PD+++ S L AC+Q+ L+ GK IH + + + + N V+
Sbjct: 580 GSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVM 639
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++DMY+KCG A +F+Q+ RD +SW +IA+YG HG EAL LF +M ++ K
Sbjct: 640 GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 699
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD TF ++LSA SH+GLV+EG Y+F+ M+++Y +P +HY+C++DLL R G + EA +
Sbjct: 700 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 759
Query: 436 IVD-SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
I+ + + + L S CH HKK +GE++ + +++ +PDD + ++SN +A +
Sbjct: 760 ILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVK 819
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
KW+EV VR +++ G+KK PG S +EV +H F++EDKSH Q D++Y
Sbjct: 820 KWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQ-ADMIY 868
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 266/478 (55%), Gaps = 9/478 (1%)
Query: 16 IIALYGGKNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDV 72
+I LY + SA+ +F+ E PL + +N ++ A ++ E L ++++++ +
Sbjct: 236 LINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYL 294
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ T+ LKAC L + G+ + ++ G+ DV V SS + +Y KC +A+
Sbjct: 295 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIK 354
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +D+ W+++I+ +GQP +A++ ++ MK G D V + +I +CA L D
Sbjct: 355 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H +R LD V ++LVDMY K G L++A VF+ + R N+V+W ++I+G
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 474
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
++ G + S +EL M G P +L S L+AC++ L+LGK IHGY +R R + +
Sbjct: 475 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 534
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + +S+ID+Y KCG A +F M +++SWNV+I+ Y G EAL +F M +
Sbjct: 535 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 594
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKPD TF S+L A S ++E+G+ + ++ K++ E ++D+ A+ G V+
Sbjct: 595 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIES-KLEINEVVMGALLDMYAKCGAVD 653
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
EAL I + + E W ++++ +H + K+ +K+ + + PD + A++S
Sbjct: 654 EALHIFNQLP-ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILS 710
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 172/328 (52%), Gaps = 2/328 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++++ + G ++ +YG + A+++FE++ + V ++NS+I YS K
Sbjct: 425 LVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSC 484
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M +E +RP +T + L AC ++L++G+ I + D+FV SS+++L
Sbjct: 485 IELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDL 544
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F+ M + ++V W+ MI+G V G EA+ + M+K G+ D +
Sbjct: 545 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 604
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ AC+ L G +H + I L ++ V +L+DMYAK G +D A H+F +
Sbjct: 605 TSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE 664
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V+W ++I+ + +G A L+L +MQ +PD V+ ++ L AC+ G + G
Sbjct: 665 RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYY 724
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCG 326
+ + F + + +ID+ + G
Sbjct: 725 FNQMIAEYGFKPAVEHYSCLIDLLGRVG 752
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 328/530 (61%), Gaps = 3/530 (0%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
+ +Y N A KLF+E+P R V ++N++I Y + P + L L+ +M +PDS
Sbjct: 148 VGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDS 207
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
T T + +C L+DL+ G+EI + V G+ D FV S+++++Y KCG + A FE+
Sbjct: 208 VTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQ 267
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+QRK++V W+SMI G G + ++ ++RM +EGI + ++ AC+ + + G
Sbjct: 268 IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLG 327
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+HGY IR + D+ V +SL+D+Y K G++ A +VF+NM + N+V+W +ISG+ +
Sbjct: 328 KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKV 387
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLG 315
G L + +M+ G +PD+++ S L AC+Q+ L+ GK IH + + + + N V+
Sbjct: 388 GSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVM 447
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++DMY+KCG A +F+Q+ RD +SW +IA+YG HG EAL LF +M ++ K
Sbjct: 448 GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 507
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD TF ++LSA SH+GLV+EG Y+F+ M+++Y +P +HY+C++DLL R G + EA +
Sbjct: 508 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 567
Query: 436 IVD-SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
I+ + + + L S CH HKK +GE++ + +++ +PDD + ++SN +A +
Sbjct: 568 ILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVK 627
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
KW+EV VR +++ G+KK PG S +EV +H F++EDKSH Q D++Y
Sbjct: 628 KWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQ-ADMIY 676
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 266/478 (55%), Gaps = 9/478 (1%)
Query: 16 IIALYGGKNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDV 72
+I LY + SA+ +F+ E PL + +N ++ A ++ E L ++++++ +
Sbjct: 44 LINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYL 102
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ T+ LKAC L + G+ + ++ G+ DV V SS + +Y KC +A+
Sbjct: 103 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIK 162
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +D+ W+++I+ +GQP +A++ ++ MK G D V + +I +CA L D
Sbjct: 163 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H +R LD V ++LVDMY K G L++A VF+ + R N+V+W ++I+G
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 282
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
++ G + S +EL M G P +L S L+AC++ L+LGK IHGY +R R + +
Sbjct: 283 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 342
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + +S+ID+Y KCG A +F M +++SWNV+I+ Y G EAL +F M +
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKPD TF S+L A S ++E+G+ + ++ K++ E ++D+ A+ G V+
Sbjct: 403 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIES-KLEINEVVMGALLDMYAKCGAVD 461
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
EAL I + + E W ++++ +H + K+ +K+ + + PD + A++S
Sbjct: 462 EALHIFNQLP-ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILS 518
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 204/384 (53%), Gaps = 5/384 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D++ LK C+ LK G+ I +K V LG N++ + S++NLY C A + F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGD 192
+ ++ D+ W+ ++ N E ++ + R+ + D +++AC+ LG
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G VH + I+ +DV V +S V MYAK + A +F M ++ +W +IS
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISC 181
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ Q+G LEL EM+ GF+PDSV+L + + +CA++ L+ GK IH VR F +
Sbjct: 182 YYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALD 241
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY KCG A+ +F+Q+Q ++++SWN +IA Y + G + + LF +M E
Sbjct: 242 GFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDE 301
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++P +T +S+L A S S ++ G++ ++ + +++ + ++DL + G +
Sbjct: 302 EGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII-RNRVEADIFVNSSLIDLYFKCGNIG 360
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A + +M + + W ++SG
Sbjct: 361 SAENVFQNMP-KTNVVSWNVMISG 383
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 172/328 (52%), Gaps = 2/328 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++++ + G ++ +YG + A+++FE++ + V ++NS+I YS K
Sbjct: 233 LVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSC 292
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M +E +RP +T + L AC ++L++G+ I + D+FV SS+++L
Sbjct: 293 IELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDL 352
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F+ M + ++V W+ MI+G V G EA+ + M+K G+ D +
Sbjct: 353 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 412
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ AC+ L G +H + I L ++ V +L+DMYAK G +D A H+F +
Sbjct: 413 TSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE 472
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V+W ++I+ + +G A L+L +MQ +PD V+ ++ L AC+ G + G
Sbjct: 473 RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYY 532
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCG 326
+ + F + + +ID+ + G
Sbjct: 533 FNQMIAEYGFKPAVEHYSCLIDLLGRVG 560
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 317/541 (58%), Gaps = 1/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A +F+ +P R + +N++I Y++ L L +M +E RPD
Sbjct: 71 VVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPD 130
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A L++G + + G+ + V V ++++++Y KCG ++ A V F+
Sbjct: 131 SITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFD 190
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + +V W+SMI+G V +G A+ +++M EG+ V +MG + ACADLGD
Sbjct: 191 GMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLER 250
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + L+ DV V SL+ MY+K +D+A+ +FKN+ +V+W A+I G+AQ
Sbjct: 251 GKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQ 310
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVL 314
NG L EMQS +PDS ++VS + A A++ + K IHG +RRF D N+ +
Sbjct: 311 NGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFV 370
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY+KCG AR LFD M +R +I+WN +I YG HG G+ ++ LF +M + +
Sbjct: 371 MTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTI 430
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF LSA SHSGLVEEG +F+ M Y I+PT HY MVDLL RAG + +A
Sbjct: 431 KPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAW 490
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M +PG+ V+ A+L C HK +GEK A ++ KLNPDD G H L++N +A
Sbjct: 491 DFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATAS 550
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W +VA VR M KSG++K PG S+VE+ E+H+F SH Q + I L+ L E+R
Sbjct: 551 MWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIR 610
Query: 555 A 555
A
Sbjct: 611 A 611
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 236/434 (54%), Gaps = 5/434 (1%)
Query: 50 AYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN 109
Y++ S L +++M + VRP FT LK C DLK G+EI + G+
Sbjct: 4 GYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSW 63
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
++F + ++N+Y KC ++N+A F++M +DLVCW++MI+G NG + A+ RM
Sbjct: 64 NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMS 123
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+EG D + ++ ++ A AD R G++VHGY +R V V T+LVDMY+K G +
Sbjct: 124 EEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVS 183
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+A +F M +V+W ++I G+ Q+G A + + +M G +P +V+++ AL ACA
Sbjct: 184 IARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACA 243
Query: 290 QIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+G L+ GK +H + + D ++ + S+I MYSKC A +F ++++ L+SWN
Sbjct: 244 DLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNA 303
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I Y +G EAL+ F +M +KPD T S++ AL+ + + ++ L++ ++
Sbjct: 304 MILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF 363
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ +VD+ A+ G + A K+ D M+ + W A++ G H ++
Sbjct: 364 -LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARH-VITWNAMIDGYGTHGLGKTSVEL 421
Query: 469 AKKVLK--LNPDDL 480
K++ K + P+D+
Sbjct: 422 FKEMKKGTIKPNDI 435
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
++ G+A++ S L M+ P + L C LK GK IHG +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F +NL T V++MY+KC + A +FD+M RDL+ WN +I+ Y +G + AL L L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY----ACMVDL 423
+M E +PD T S+L A++ + L+ G + V Y ++ + +VD+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIG-----MAVHGYVLRAGFESLVNVSTALVDM 175
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ G V A I D M + W +++ G
Sbjct: 176 YSKCGSVSIARVIFDGMDHRT-VVSWNSMIDG 206
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 315/541 (58%), Gaps = 1/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A K+F+ +P R + +N+II Y++ L L +M +E RPD
Sbjct: 216 VVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPD 275
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A + L++G I ++ G+ + V V ++++++Y KCG + A + F+
Sbjct: 276 SITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFD 335
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K +V W+SMI+G V NG P A++ +++M E ++ V +MG + ACADLGD
Sbjct: 336 RMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQ 395
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + L DV V SL+ MY+K +D+A+ +F+N+ +V+W A+I G+AQ
Sbjct: 396 GRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQ 455
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG ++ +MQ +PDS ++VS + A A++ L K IHG +R D N+ +
Sbjct: 456 NGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFV 515
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY+KCG AR LFD M R + +WN +I YG HG G+ AL LF +M + ++
Sbjct: 516 ATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVI 575
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF +LSA SHSGLVEEG +F M Y ++P HY MVDLL RA + EA
Sbjct: 576 KPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAW 635
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M EP ++V+ A+L C HK +GEK A ++ L+PDD G H L++N +A
Sbjct: 636 DFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATAS 695
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W++VA VR TM K G++K PG+SVVE+ E+H F SH Q + I L+ L ++
Sbjct: 696 MWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK 755
Query: 555 A 555
A
Sbjct: 756 A 756
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 255/467 (54%), Gaps = 7/467 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++L+ + A ++F+ + + + Y++++ Y+R S + + + +M + VRP
Sbjct: 114 KLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRP 173
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT LK C DL+ G+EI + + G+ ++VF + ++N+Y KC + EA F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DLVCW+++I+G NG + A++ RM++EG D + ++ ++ A AD+G R
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G S+HGYS+R V V T+LVDMY+K G + A +F M+ +V+W ++I G+
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYV 353
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QNG G+ +E+ +M E +V+++ AL ACA +G ++ G+ +H + ++
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVS 413
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MYSKC A +F+ +Q + L+SWN +I Y +G EA+ F +M
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN 473
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD T S++ AL+ ++ + + W +V + + +VD+ A+ G V A
Sbjct: 474 IKPDSFTMVSVIPALAELSVLPQAK-WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLN 476
K+ D M E + W A++ G H + EK+ K+V+K N
Sbjct: 533 RKLFDMMD-ERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPN 578
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 202/376 (53%), Gaps = 6/376 (1%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
+ L+ C S+ +L + ++ G ++ + +++L+ K G ++EA F+ ++ K
Sbjct: 82 ILLELCTSMKEL---HQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDK 138
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ +M+ G N +AV + RM+ +G+ L++ C D D R G +H
Sbjct: 139 IDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
I +V T +V+MYAK ++ A +F M ++V W +ISG+AQNG
Sbjct: 199 CQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGK 258
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
+ LEL++ MQ G PDS+++VS L A A +G L++G+SIHGY++R F+ + + T+++
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMYSKCG AR +FD+M + ++SWN +I Y +G A+ +F +M++ V+ +
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNV 378
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T L A + G VE+GR+ L+ + ++ ++ + ++ V+ A +I ++
Sbjct: 379 TVMGALHACADLGDVEQGRFVHKLL-DQLELGSDVSVMNSLISMYSKCKRVDIAAEIFEN 437
Query: 440 MSTEPGLAVWVALLSG 455
+ + L W A++ G
Sbjct: 438 LQHKT-LVSWNAMILG 452
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 162/296 (54%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
++ ++ N ++ +Y + +AR +F+ + + V ++NS+I Y + P +
Sbjct: 303 MRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAM 362
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M+ E V + T AL AC L D++ G + + +L G+DV V +S++++Y
Sbjct: 363 EIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMY 422
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC +++ A FE +Q K LV W++MI G NG+ EA+D + +M+ + I D M+
Sbjct: 423 SKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMV 482
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I A A+L +HG IR L+ +V V T+LVDMYAK G + A +F M
Sbjct: 483 SVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDER 542
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
++ TW A+I G+ +GL + LEL +M+ +P+ V+ + L AC+ G ++ G
Sbjct: 543 HVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEG 598
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 331/529 (62%), Gaps = 13/529 (2%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NSII ++R + L ++ M K + P+ STF +K+C SL DL G++I +
Sbjct: 51 VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQ 110
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A GYG+D+FV S+++++Y KCG +N+A F+++ +++V W+SMI+G V N + RE
Sbjct: 111 QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170
Query: 161 AVDAYKR-MKKEGIDADEV---------VMMG-LIQACADLGDSRFGLSVHGYSIRRHLN 209
AV +K + + D DE+ V++G +I ACA + VHG ++++
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
+ V +L+D YAK G + ++ VF M ++ +W +LI+ +AQNGL+ L +M
Sbjct: 231 GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDM 290
Query: 270 QSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
G ++V+L + LLACA G L++GK IH V+ + NLV+GTS++DMY KCG
Sbjct: 291 VKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGR 350
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR FD+++ +++ SW V++A YG+HGHG+EA+ +F +MI +KP++ TF S+L+A
Sbjct: 351 VEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAA 410
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+GL++EG +WF+ M ++ ++P +HY+CMVDLL RAG ++EA ++ M +P
Sbjct: 411 CSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFI 470
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW +LL C HK +GE A+K+ KL+P + G + L+SN +A +W++V +R M+
Sbjct: 471 VWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMK 530
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
G+ K PGYS+VE G +H F++ DK H Q+E I L +L ++++ +
Sbjct: 531 NHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEV 579
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 185/373 (49%), Gaps = 22/373 (5%)
Query: 8 AYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY 64
YG+ + +I +Y + ARKLF+E+P R V ++ S+I Y + E E + L+
Sbjct: 116 GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLF 175
Query: 65 NQMIKED-----------VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFV 113
+ + D V DS + AC + + E + AV+ G+ + V
Sbjct: 176 KEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAV 235
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG- 172
G+++++ Y KCG+++ + F+ M+ D+ W+S+I NG EA + M K G
Sbjct: 236 GNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGE 295
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ + V + ++ ACA G + G +H ++ L ++ V TS+VDMY K G +++A
Sbjct: 296 VRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMAR 355
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
F + R N+ +W +++G+ +G +++ EM CG +P+ ++ VS L AC+ G
Sbjct: 356 KAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAG 415
Query: 293 FLKLGKSIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWN 347
LK G H + + +F++ G + ++D+ + G A L +M+ + D I W
Sbjct: 416 LLKEG--WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWG 473
Query: 348 VIIASYGIHGHGE 360
++ + IH + E
Sbjct: 474 SLLGACRIHKNVE 486
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 14/238 (5%)
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+L S K + + ++ +W ++I+ FA++G + L M+ P+ + + +C
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC 96
Query: 289 AQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ + L GK IH V + ++ + +++IDMYSKCG + AR LFD++ R+++SW
Sbjct: 97 SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWT 156
Query: 348 VIIASYGIHGHGEEALSLFLQMI---ET--------MVKPDHSTFASLLSALSHSGLVEE 396
+I+ Y + EA+ LF + + ET V D ++SA + +
Sbjct: 157 SMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
L V K + ++D A+ GE+ + K+ D M E + W +L++
Sbjct: 217 TECVHGLAVKK-GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIA 272
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 41/309 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + ARK F+ L + V ++ ++ Y E + ++ +MI+ ++P+
Sbjct: 341 IVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPN 400
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG----SSMLNLYVKCGKMNEAM 131
TF L AC LK G W ++ DV G S M++L + G + EA
Sbjct: 401 YITFVSVLAACSHAGLLKEG---WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457
Query: 132 VAFEKMQRK-DLVCWSSMINGL-VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA- 188
++M+ K D + W S++ + + A K K + + V++ I A A
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517
Query: 189 ---DLGDSRFGLSVHG------YSI-----RRHLNL--------DVKVQTSLVDMYAKTG 226
D+ R + HG YSI R H+ L K+ L ++ K
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQ 577
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQ---------NGLAGSTLELLMEMQSCGFEPD 277
+ +V + +++ G ++ ++ N + GS ++++ ++ CG
Sbjct: 578 EVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHF 637
Query: 278 SVSLVSALL 286
++ L+S ++
Sbjct: 638 AIKLISKIV 646
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 326/526 (61%), Gaps = 10/526 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K ++P+ STF A+K+C +L+DL G + +
Sbjct: 117 VFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQ 176
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A+ G+ D+FV S+++++Y KCG++ +A F+++ +++V W+SMI G V N
Sbjct: 177 QALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHR 236
Query: 161 AVDAYKRM-----KKEG---IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
A+ +K EG + D + M+ ++ AC+ + + VHG+ I+R D+
Sbjct: 237 ALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDL 296
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
V+ +L+D YAK G L ++ VF M+ ++++W ++I+ +AQNG++ ++E+ M
Sbjct: 297 GVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 356
Query: 273 G-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC 330
G ++V+L + LLACA G +LGK IH ++ + N+ +GTS+IDMY KCG
Sbjct: 357 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 416
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR FD+M+ +++ SW+ ++A YG+HGH +EAL +F +M VKP++ TF S+L+A SH
Sbjct: 417 ARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 476
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+EEG +WF M ++ ++P +HY CMVDLL RAG ++EA ++ M P VW
Sbjct: 477 AGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWG 536
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
ALL C HK +GE A+K+ +L+P + G + L+SN +A +WE+V +R M+ SG
Sbjct: 537 ALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSG 596
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ K PG+S+V++ G +H F++ D+ H Q+E I L+KL ++++ +
Sbjct: 597 LVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEV 642
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 180/337 (53%), Gaps = 14/337 (4%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + ++ W+S+I L +G EA+ A+ M+K + + I++C+ L D G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
H ++ D+ V ++LVDMY+K G L A +F +S NIV+W ++I+G+ QN
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 257 GLAGSTLELLME--MQSCGFEPDS------VSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
A L L E ++ G E D +++VS L AC+++ + + +HG+ ++R
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F+ +L + +++D Y+KCG +R +FD M RD+ISWN IIA Y +G E++ +F
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 368 QMI-ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M+ + + + T +++L A +HSG G+ D ++ K ++ ++D+ +
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI-KMGLESNVFVGTSIIDMYCK 410
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKK 461
G+VE A K D M E + W A+++ G H H K
Sbjct: 411 CGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGHAK 446
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 133/239 (55%), Gaps = 13/239 (5%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y ++ +R++F+ + R V ++NSII Y++ E + ++++M+K+ ++ ++ T
Sbjct: 306 YAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVT 365
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+ L AC ++G+ I + +++G ++VFVG+S++++Y KCGK+ A AF++M+
Sbjct: 366 LSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR 425
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
K++ WS+M+ G +G +EA++ + M G+ + + + ++ AC S GL
Sbjct: 426 EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC-----SHAGLL 480
Query: 199 VHGYSIRRHLNLDVKVQT------SLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G+ + ++ + V+ +VD+ + G+L A + K M R + V WGAL+
Sbjct: 481 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
II +Y + ARK F+ + + V ++++++ Y E L ++ +M V+P+
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG----SSMLNLYVKCGKMNEAM 131
TF L AC L EE W + + DV G M++L + G + EA
Sbjct: 464 YITFVSVLAACSHAGLL---EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAF 520
Query: 132 VAFEKMQ-RKDLVCWSSMI 149
+ M+ R D V W +++
Sbjct: 521 DLIKGMKLRPDFVVWGALL 539
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 320/544 (58%), Gaps = 1/544 (0%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N ++++YG +I +RKLF+ + R + ++NS++ AY++ EVL L M +
Sbjct: 203 NLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQ 262
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD TF L S +LK+G + + + + D V +S++ +Y+K G ++ A
Sbjct: 263 GFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIA 322
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
FE+ KD+V W++MI+GLV NG +A+ +++M K G+ + M +I ACA L
Sbjct: 323 FRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQL 382
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G G SVHGY R L +D+ Q SLV M+AK GHLD +S VF M++ N+V+W A+I
Sbjct: 383 GSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMI 442
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+G+AQNG L L EM+S PDS+++VS L CA G L LGK IH + +R
Sbjct: 443 TGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLR 502
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+++ TS++DMY KCG A+ F+QM S DL+SW+ II YG HG GE AL + +
Sbjct: 503 PCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKF 562
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+E+ +KP+H F S+LS+ SH+GLVE+G ++ M + I P +H+AC+VDLL+RAG
Sbjct: 563 LESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGR 622
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
VEEA + ++P L V +L C + +G+ +A +L L P D G +++
Sbjct: 623 VEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHC 682
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A KWEEV MR G+KK+PG+S ++++G + F + SH Q+++IV LK L
Sbjct: 683 YASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKFL 742
Query: 550 YLEM 553
EM
Sbjct: 743 RKEM 746
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 231/447 (51%), Gaps = 6/447 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARK+F+ +P R V + SII YSR E L+++M ++ ++P S T L
Sbjct: 123 ARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTM---LSLLFG 179
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ +L + + A+ G+ +D+ + +SML++Y KC + + F+ M ++DLV W+S+
Sbjct: 180 VSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSL 239
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++ G E + K M+ +G + D ++ A G+ + G +HG +R
Sbjct: 240 VSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCF 299
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+LD V+TSL+ MY K G++D+A +F+ ++V W A+ISG QNG A L + +
Sbjct: 300 DLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQ 359
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M G + + ++ S + ACAQ+G LG S+HGY R ++ S++ M++KCG
Sbjct: 360 MLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGH 419
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ +FD+M R+L+SWN +I Y +G+ +AL LF +M PD T SLL
Sbjct: 420 LDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQG 479
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ +G + G+ W V + ++P +VD+ + G+++ A + + M + L
Sbjct: 480 CASTGQLHLGK-WIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSH-DLV 537
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLK 474
W A++ G H K + K L+
Sbjct: 538 SWSAIIVGYGYHGKGETALRFYSKFLE 564
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 240/480 (50%), Gaps = 24/480 (5%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
++++N+II +S + + +VL Y M+K V D+ TF LKAC SL +G + +
Sbjct: 34 INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+ + G D ++ SS++N Y K G + A F+ M +++V W+S+I G+ E
Sbjct: 94 RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A + M+++GI V M+ L+ ++L + +HG +I D+ + S++
Sbjct: 154 AFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQ---CLHGSAILYGFMSDINLSNSMLS 210
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY K +++ + +F M + ++V+W +L+S +AQ G L LL M+ GFEPD +
Sbjct: 211 MYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQT 270
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
S L A G LKLG+ +HG +R FD + + TS+I MY K G A +F++
Sbjct: 271 FGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSL 330
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+D++ W +I+ +G ++AL++F QM++ VK +T AS+++A + G G
Sbjct: 331 DKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTS 390
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
M ++++ +V + A+ G ++++ + D M+ L W A+++G
Sbjct: 391 VHGYMF-RHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKR-NLVSWNAMITG---- 444
Query: 460 KKFSIGEKVAKKVLKLN--------PDDLGIHALVSNFFAMEQ----KWEEVAGVRKTMR 507
++ V K + N PD + I +L+ + Q KW +R +R
Sbjct: 445 --YAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLR 502
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 321/542 (59%), Gaps = 2/542 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++ A Y G + A +F+ + L+ +N +I Y+ P + L LY +M+ R
Sbjct: 100 KLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRA 159
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T+ LKAC L+ +++G + + V G +D++VG+S+L +Y K G M A + F
Sbjct: 160 DNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVF 219
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DL W++MI+G N A + M K G+ AD ++GL+ ACADL +
Sbjct: 220 DRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVK 279
Query: 195 FGLSVHGYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HGY++R + N + SL++MY + A +F+ + + V+W ++I G+
Sbjct: 280 EGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGY 339
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
A+NG A +L L M G PD V+ ++ L AC QI L+ G SIH Y V++ FD N
Sbjct: 340 ARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANT 399
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++GT+++DMYSKCG +C+R +FD+M + L+SW+ ++A YG+HG G EA+S+ M
Sbjct: 400 IVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKAN 459
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD+ F S+LSA SH+GLV EG+ F M +Y ++P HY+CMVDLL RAG ++E
Sbjct: 460 SVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDE 519
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A I+ +M +P +W ALL+ HK + E A+KV +NP + + +SN +A
Sbjct: 520 AYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAA 579
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E++W++V VR +R+ G+KK PG S +E++ +H F++ DKSH Q EDI L +L +
Sbjct: 580 EKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQ 639
Query: 553 MR 554
++
Sbjct: 640 LK 641
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 4/349 (1%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
N+ ++ + + Y CG M++A V F+ + K+ W+ MI G NG P +++ Y+ M
Sbjct: 93 NNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREM 152
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
G AD +++AC DL G VH + L D+ V SL+ MYAK G +
Sbjct: 153 LCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDM 212
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
A VF M+ ++ +W +ISG+A+N +G+ + M G D +L+ L AC
Sbjct: 213 GTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSAC 272
Query: 289 AQIGFLKLGKSIHGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
A + +K GK IHGY VR ++N S+I+MY C AR LF++++ +D +SW
Sbjct: 273 ADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSW 332
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N +I Y +G E+L LF +M PD TF ++L A + G +V
Sbjct: 333 NSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVK 392
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K T A +VD+ ++ G + + ++ D M + L W A+++G
Sbjct: 393 KGFDANTIVGTA-LVDMYSKCGSLACSRRVFDEMP-DKSLVSWSAMVAG 439
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 314/547 (57%), Gaps = 33/547 (6%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRK 101
++N I + E+P E + LY ++++ D +PD+ T+ + KAC L ++MG EI
Sbjct: 73 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 132
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
+ LG+ +D+FV +++++L V CG ++ A F+K +DLV W+SMING V G EA
Sbjct: 133 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEA 192
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
++ Y+ MK EGI DEV M+G++ +CA L D G H Y L L V + +L+DM
Sbjct: 193 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDM 252
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL----------------------- 258
Y K G+L+ A +F +M+ +V+W ++ G+AQ+GL
Sbjct: 253 YMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMI 312
Query: 259 --------AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
L L EMQ+ PD V++VS L AC+Q+G L +G IH Y +
Sbjct: 313 GGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS 372
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N+ LGT++IDMY+KCG + A +F ++ R+ ++W II+ +HG+ A++ F +M
Sbjct: 373 LNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEM 432
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
I+ V PD TF LLSA H GLVEEGR +F M SK+ + P KHY+CMVDLL RAG
Sbjct: 433 IDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGL 492
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+EEA +++ SM E VW AL C H +GE+ A K+L+++P D GI+ L++N
Sbjct: 493 LEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANM 552
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ + W+E RK MR+ G++K PG S +EVNG ++ FI+ DKSH Q E I L +L
Sbjct: 553 YGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQL 612
Query: 550 YLEMRAI 556
++ +
Sbjct: 613 TRQLELV 619
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 191/391 (48%), Gaps = 37/391 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I L D+ ARK+F++ +R + ++NS+I Y R+ +E L Y +M E ++PD
Sbjct: 148 VIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPD 207
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM-------- 127
T + +C L DL +G E E G V + ++++++Y+KCG +
Sbjct: 208 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 267
Query: 128 ---NEAMVA--------------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
N+ MV+ F++M KD+V W++MI G V + +EA+
Sbjct: 268 SMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 327
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ M+ I+ DEV M+ + AC+ LG G+ +H Y + L+L+V + T+L+DMYAK
Sbjct: 328 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 387
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G + A VF+ + N +TW A+ISG A +G A + EM PD V+ +
Sbjct: 388 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 447
Query: 285 LLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SR 341
L AC G ++ G+ +F+ + L + ++D+ + G+ A L M
Sbjct: 448 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 507
Query: 342 DLISWNVIIASYGIHGH---GEEALSLFLQM 369
D + W + + IHG+ GE A S LQM
Sbjct: 508 DAVVWGALFFACRIHGNVLMGERAASKLLQM 538
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 4/230 (1%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALL 286
LD +++ N N +W I GF + + L + C G +PD+ +
Sbjct: 56 LDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFK 115
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
ACA++ +++G I G+ + FD ++ + +VI + CG AR +FD+ RDL+S
Sbjct: 116 ACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVS 175
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y G EAL+ + +M +KPD T ++S+ + ++ GR +
Sbjct: 176 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRE-SHCYI 234
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++ T ++D+ + G +E A K+ DSM T + W ++ G
Sbjct: 235 EENGLKLTVPLANALMDMYMKCGNLESARKLFDSM-TNKTMVSWTTMVVG 283
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/532 (38%), Positives = 310/532 (58%), Gaps = 18/532 (3%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRK 101
++N I + E+P E + LY ++++ D +PD+ T+ + KAC L ++MG EI
Sbjct: 45 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 104
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
+ LG+ +D+FV +++++L V CG ++ A F+K +DLV W+SMING V G EA
Sbjct: 105 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEA 164
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
++ Y+ MK EGI DEV M+G++ +CA L D G H Y L L V + +L+DM
Sbjct: 165 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDM 224
Query: 222 YAKTGHLDLASHVFKNMSRI----------------NIVTWGALISGFAQNGLAGSTLEL 265
Y K G+L+ A +F +M+ ++V W A+I G+ L L
Sbjct: 225 YMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 284
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
EMQ+ PD V++VS L AC+Q+G L +G IH Y + N+ LGT++IDMY+K
Sbjct: 285 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 344
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG + A +F ++ R+ ++W II+ +HG+ A++ F +MI+ V PD TF L
Sbjct: 345 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 404
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA H GLVEEGR +F M SK+ + P KHY+CMVDLL RAG +EEA +++ SM E
Sbjct: 405 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 464
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW AL C H +GE+ A K+L+++P D GI+ L++N + + W+E RK
Sbjct: 465 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRK 524
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
MR+ G++K PG S +EVNG ++ FI+ DKSH Q E I L +L ++ +
Sbjct: 525 LMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELV 576
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 191/376 (50%), Gaps = 22/376 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I L D+ ARK+F++ +R + ++NS+I Y R+ +E L Y +M E ++PD
Sbjct: 120 VIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPD 179
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM-------- 127
T + +C L DL +G E E G V + ++++++Y+KCG +
Sbjct: 180 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 239
Query: 128 ---NEAMVA-----FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
N+ MV+ F++M KD+V W++MI G V + +EA+ + M+ I+ DEV
Sbjct: 240 SMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVT 299
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
M+ + AC+ LG G+ +H Y + L+L+V + T+L+DMYAK G + A VF+ +
Sbjct: 300 MVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP 359
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N +TW A+ISG A +G A + EM PD V+ + L AC G ++ G+
Sbjct: 360 GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 419
Query: 300 IHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+F+ + L + ++D+ + G+ A L M D + W + + IH
Sbjct: 420 YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH 479
Query: 357 GH---GEEALSLFLQM 369
G+ GE A S LQM
Sbjct: 480 GNVLMGERAASKLLQM 495
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALL 286
LD +++ N N +W I GF + + L + C G +PD+ +
Sbjct: 28 LDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFK 87
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
ACA++ +++G I G+ + FD ++ + +VI + CG AR +FD+ RDL+S
Sbjct: 88 ACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVS 147
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y G EAL+ + +M +KPD T ++S+ + ++ GR +
Sbjct: 148 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRE-SHCYI 206
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ ++ T ++D+ + G +E A K+ DSM T + W +L
Sbjct: 207 EENGLKLTVPLANALMDMYMKCGNLESARKLFDSM-TNKTMVSWTTML 253
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 322/544 (59%), Gaps = 4/544 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++ A Y + A+ +F+++ L+ +NS+I Y+ SP L LY +M+ +P
Sbjct: 63 KLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKP 122
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T+ LKAC L+ +MG ++ V G DV+VG+S+L++Y K G + A V F
Sbjct: 123 DNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVF 182
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DL W++M++G V NG+ R A + + M+++G D ++ L+ AC D+ D +
Sbjct: 183 DRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLK 242
Query: 195 FGLSVHGYSIRRHLNLDVK---VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HGY +R + V + S++DMY + A +F+ + ++V+W +LIS
Sbjct: 243 VGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLIS 302
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+ + G A LEL M G PD V+++S L AC QI L+LG ++ Y V+R +
Sbjct: 303 GYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV 362
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+V+GT++I MY+ CG CA +FD+M ++L + V++ +GIHG G EA+S+F +M+
Sbjct: 363 NVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
V PD F ++LSA SHSGLV+EG+ F M Y ++P HY+C+VDLL RAG +
Sbjct: 423 GKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYL 482
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++++M +P VW ALLS C H+ + A+K+ +LNPD + + +SN +
Sbjct: 483 DEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIY 542
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A E++WE+V VR + K ++K P YS VE+N +H F + D SH Q +DI LK L
Sbjct: 543 AAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLN 602
Query: 551 LEMR 554
+++
Sbjct: 603 EQLK 606
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+ ++ + + Y CG M A F+++ K+ W+SMI G N P A+ Y +M
Sbjct: 57 NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
G D +++AC DL G VH + L DV V S++ MY K G ++
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVE 176
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF M ++ +W ++SGF +NG A E+ +M+ GF D +L++ L AC
Sbjct: 177 AARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACG 236
Query: 290 QIGFLKLGKSIHGYTVRRFD----FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+ LK+GK IHGY VR + N L S+IDMY C SCAR LF+ ++ +D++S
Sbjct: 237 DVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVS 296
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I+ Y G +AL LF +M+ PD T S+L+A + + G +V
Sbjct: 297 WNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVV 356
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ + A ++ + A G + A ++ D M E L +++G H +
Sbjct: 357 KRGYVVNVVVGTA-LIGMYANCGSLVCACRVFDEMP-EKNLPACTVMVTGFGIHGR 410
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G ++RR+ L T L YA GH+ A H+F + N W ++I G+A N
Sbjct: 51 GGTLRRNTYL----ATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPS 106
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVI 319
L L ++M G +PD+ + L AC + ++G+ +H V + ++ +G S++
Sbjct: 107 RALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSIL 166
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
MY K G AR +FD+M RDL SWN +++ + +G A +F M D +
Sbjct: 167 SMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRT 226
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSK----YKIQPTEKHYAC-------MVDLLARAG 428
T +LLSA DL V K Y ++ E C ++D+
Sbjct: 227 TLLALLSACGDV---------MDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCE 277
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
V A K+ + + + + W +L+SG
Sbjct: 278 SVSCARKLFEGLRVKD-VVSWNSLISG 303
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 319/544 (58%), Gaps = 1/544 (0%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N ++ +YG +I +RKLF+ + R + ++NS+I AY++ + EVL L M +
Sbjct: 195 NLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQ 254
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
TF L S +LK+G + + + G+ D V +S++ +Y+K GK++ A
Sbjct: 255 GFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIA 314
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
FE+ KD+V W++MI+GLV NG +A+ +++M K G+ M +I ACA L
Sbjct: 315 FRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQL 374
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G G S+ GY +R+ L LDV Q SLV MYAK GHLD +S VF M+R ++V+W A++
Sbjct: 375 GSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMV 434
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+G+AQNG L L EM+S PDS+++VS L CA G L LGK IH + +R
Sbjct: 435 TGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLR 494
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+++ TS++DMY KCG A+ F+QM S DL+SW+ II YG HG GE AL + +
Sbjct: 495 PCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKF 554
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+E+ +KP+H F S+LS+ SH+GLVE+G ++ M + I P +H+AC+VDLL+RAG
Sbjct: 555 LESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGR 614
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
VEEA + +P L V +L C + +G+ +A +L L P D G +++
Sbjct: 615 VEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHC 674
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A KWEEV MR G+KK+PG+S ++++G + F + SH Q+++IV LK L
Sbjct: 675 YASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKIL 734
Query: 550 YLEM 553
EM
Sbjct: 735 RKEM 738
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 231/447 (51%), Gaps = 6/447 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARK+F+ +P R V + +II YSR E L+++M ++ ++P S T L
Sbjct: 115 ARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFG 171
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ +L + + A+ G+ +D+ + +SMLN+Y KCG + + F+ M +DLV W+S+
Sbjct: 172 VSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSL 231
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+ G E + K M+ +G +A ++ A G+ + G +HG +R
Sbjct: 232 ISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGF 291
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
LD V+TSL+ +Y K G +D+A +F+ S ++V W A+ISG QNG A L + +
Sbjct: 292 YLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQ 351
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M G +P + ++ S + ACAQ+G LG SI GY +R+ ++ S++ MY+KCG
Sbjct: 352 MLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGH 411
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ +FD M RDL+SWN ++ Y +G+ EAL LF +M PD T SLL
Sbjct: 412 LDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQG 471
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ +G + G+ W V + ++P +VD+ + G+++ A + + M + L
Sbjct: 472 CASTGQLHLGK-WIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSH-DLV 529
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLK 474
W A++ G H K + K L+
Sbjct: 530 SWSAIIVGYGYHGKGEAALRFYSKFLE 556
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 213/416 (51%), Gaps = 6/416 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
++ N+ I +S + + +VL Y M+K V D+ TF LKAC L +G + +
Sbjct: 26 TNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQ 85
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+ + G D ++ SS++N Y K G + A F+ M +++V W+++I G+ E
Sbjct: 86 RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPE 145
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A + M+++GI V ++ L+ ++L + +HG +I D+ + S+++
Sbjct: 146 AFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQ---CLHGCAILYGFMSDINLSNSMLN 202
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+Y K G+++ + +F M ++V+W +LIS +AQ G L LL M+ GFE +
Sbjct: 203 VYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQT 262
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
S L A G LKLG+ +HG +R F + + TS+I +Y K G A +F++
Sbjct: 263 FGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSS 322
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+D++ W +I+ +G ++AL++F QM++ VKP +T AS+++A + G G
Sbjct: 323 DKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTS 382
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + ++ +V + A+ G ++++ IV M L W A+++G
Sbjct: 383 ILGYIL-RQELPLDVATQNSLVTMYAKCGHLDQS-SIVFDMMNRRDLVSWNAMVTG 436
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 194/443 (43%), Gaps = 42/443 (9%)
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++ IN G + + Y M K + +D L++AC+ L GL++H +
Sbjct: 30 NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L+LD + +SL++ YAK G D+A VF M N+V W +I +++ G L
Sbjct: 90 SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EM+ G +P SV+++S L +++ + + +HG + F ++ L S++++Y K
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHGCAILYGFMSDINLSNSMLNVYGK 206
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG +R LFD M RDL+SWN +I++Y G+ E L L M + TF S+
Sbjct: 207 CGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSV 266
Query: 385 LSALSHSGLVEEGR----------YWFDLMVSKYKI-----------------QPTEKH- 416
LS + G ++ GR ++ D V I + ++K
Sbjct: 267 LSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDV 326
Query: 417 --YACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
+ M+ L + G ++AL + M +P A ++++ C +++G +
Sbjct: 327 VLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGY 386
Query: 472 VLKLN-PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM----KKVPGYSVVEVNGEL 526
+L+ P D+ + +A ++ + V M + + V GY+ E
Sbjct: 387 ILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEA 446
Query: 527 HAFIMEDKSHNQYEDIVYVLKKL 549
E +S NQ D + ++ L
Sbjct: 447 LFLFNEMRSDNQTPDSITIVSLL 469
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 314/537 (58%), Gaps = 1/537 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + ARK+F+ +P R + ++N+I+ YS+ L + N M +E+++P T
Sbjct: 179 MYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFIT 238
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L A +L +++G+EI A+ G+ + V + ++++++Y KCG + A + F+ M
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGML 298
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+++V W+SMI+ V N P+EA+ +++M EG+ +V +MG + ACADLGD G
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H S+ L+ +V V SL+ MY K +D A+ +F + IV+W A+I GFAQNG
Sbjct: 359 IHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGR 418
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L +MQ+ +PD+ + VS + A A++ K IHG +R D N+ + T+
Sbjct: 419 PIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTA 478
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMY+KCG AR +FD M R + +WN +I YG HG G+ AL LF +M + ++P+
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPN 538
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
TF S++SA SHSGLVE G F +M Y I+P+ HY MVDLL RAG + EA +
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
M +P + V+ A+L C HK + EKVA+++ +LNP+D G H L++N + WE
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWE 658
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+V VR +M + G++K PG S+VE+ E+H+F +H + I L+KL +++
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIK 715
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 236/446 (52%), Gaps = 3/446 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++L+ + A ++FE + + Y +++ +++ + L + +M ++V P
Sbjct: 74 KLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEP 133
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT LK C +L++G+EI V+ G+ D+F + + N+Y KC +++EA F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVF 193
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DLV W++++ G NG R A++ M +E + + ++ ++ A + L R
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY++R + V + T+LVDMYAK G L A +F M N+V+W ++I +
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QN + + +M G +P VS++ AL ACA +G L+ G+ IH +V D N+
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MY KC A ++F ++QSR ++SWN +I + +G EAL+ F QM
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
VKPD T+ S+++A++ + + W +V + + +VD+ A+ G + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAK-WIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
I D MS E + W A++ G H
Sbjct: 493 RLIFDMMS-ERHVTTWNAMIDGYGTH 517
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 167/292 (57%), Gaps = 1/292 (0%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N ++ +Y + +AR LF+ + R V ++NS+I AY + E+P E + ++ +M+ E
Sbjct: 272 NIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDE 331
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V+P + AL AC L DL+ G I + +VEL +V V +S++++Y KC +++ A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTA 391
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F K+Q + +V W++MI G NG+P EA++ + +M+ + D + +I A A+L
Sbjct: 392 ASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAEL 451
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ +HG +R L+ +V V T+LVDMYAK G + +A +F MS ++ TW A+I
Sbjct: 452 SITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-KSIH 301
G+ +G+ + LEL EMQ P+ V+ +S + AC+ G ++ G K H
Sbjct: 512 DGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFH 563
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 196/374 (52%), Gaps = 6/374 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C SL +L+ I + G + + +++L+ + G ++EA FE + +K
Sbjct: 44 LERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLN 100
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V + +M+ G +A+ + RM+ + ++ L++ C D + R G +HG
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
++ +LD+ T L +MYAK + A VF M ++V+W +++G++QNG+A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
LE++ M +P +++VS L A + + +++GK IHGY +R FD + + T+++DM
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG AR LFD M R+++SWN +I +Y + + +EA+ +F +M++ VKP +
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
L A + G +E GR+ L V + ++ ++ + + EV+ A + +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSV-ELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 442 TEPGLAVWVALLSG 455
+ + W A++ G
Sbjct: 400 SRT-IVSWNAMILG 412
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/526 (38%), Positives = 319/526 (60%), Gaps = 3/526 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I A+++F+ +P + V +NSII Y + L+ +M ++P T T ++A
Sbjct: 181 IGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQA 240
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C + +LK+G+ + + LG GND+ V +S +++Y K G + A F KM ++LV W
Sbjct: 241 CGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSW 300
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++MI+G V NG E+ D + R+ + D ++ L+Q C+ G +HG +IR
Sbjct: 301 NAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR 360
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
++ + T++VD+Y+K G L A+ VF M N++TW A++ G AQNG A L L
Sbjct: 361 S-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRL 419
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
+MQ G +SV+ VS + +CA +G LK G+SIHG+ R F F++V T+++DMY+K
Sbjct: 420 FAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAK 479
Query: 325 CGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
CG + A +F S+D++ WN +I YG+HGHG +A+ ++ +MIE +KP+ +TF S
Sbjct: 480 CGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLS 539
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHS LVE+G F+ M + I+P EKHYAC+VDLL+RAG EEA +++ M +
Sbjct: 540 LLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQ 599
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
PG AV ALLSGC HK ++G + + K+L L+ + GI+ ++SN +A ++W++V +R
Sbjct: 600 PGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIR 659
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
MR G+KK PGYS+VE +H F D SH +E+I + L+ L
Sbjct: 660 GLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESL 705
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 260/486 (53%), Gaps = 17/486 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I +LS +++ Y + +AR +F++ N+++ Y + E
Sbjct: 55 IITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRET 114
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ M ++ DS + T ALKAC S +D +MG EI AVE G + FVGSSM++
Sbjct: 115 LELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISF 174
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
VK GK+ EA F+ M KD+VCW+S+I G V G A + M GI + M
Sbjct: 175 LVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITM 234
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
LIQAC +G+ + G +HGY + L D+ V TS VDMY+K G ++ A VF M
Sbjct: 235 TSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPT 294
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+V+W A+ISG +NGL G + +L + S GF D ++VS L C+Q L GK
Sbjct: 295 RNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF--DLTTIVSLLQGCSQTASLATGK 352
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG +R F+ NL+L T+++D+YSKCG A +F++M+ R++I+W ++ +GH
Sbjct: 353 ILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGH 412
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTE 414
E+AL LF QM E + + TF SL+ + +H G ++ GR + F L + + T
Sbjct: 413 AEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTA 472
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CHNHKKFSIGEKVAK 470
+VD+ A+ G++ A +I S + +W ++++G H ++ I K+ +
Sbjct: 473 -----LVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIE 527
Query: 471 KVLKLN 476
+ LK N
Sbjct: 528 EGLKPN 533
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 11/264 (4%)
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
S H I L+ D V T LV Y+ L+ A +VF + + A++ G+ Q+G
Sbjct: 50 STHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSG 109
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
TLEL M+S E DS S AL ACA ++G I V + + N +G+
Sbjct: 110 RYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S+I K G A+ +FD M ++D++ WN II Y G + A LF +M + +KP
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229
Query: 377 DHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
T SL+ A G ++ G+ Y L + + T VD+ ++ G++E
Sbjct: 230 SPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTS-----FVDMYSKMGDIES 284
Query: 433 ALKIVDSMSTEPGLAVWVALLSGC 456
A + M T L W A++SGC
Sbjct: 285 ARWVFYKMPTR-NLVSWNAMISGC 307
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/525 (36%), Positives = 325/525 (61%), Gaps = 11/525 (2%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K D++P+ STF A+K+C +L DL G++ +
Sbjct: 47 VYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQ 106
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A+ G+ +D+FV S+++++Y KCGK++ A V F+++ R+++V W+S+I G V N E
Sbjct: 107 QALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHE 166
Query: 161 AVDAYKRMKKE---------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
A+ +K E G D V M+ ++ AC+ + + VHG +I+ L+
Sbjct: 167 ALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKV 226
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-Q 270
+ V+ +L+D YAK G + L+ VF +M+ ++V+W ++I+ +AQNGL+ E+ M +
Sbjct: 227 MGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLK 286
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
+ G + + V+L + LLACA G L++G +H ++ + N+++ TS+IDMY KCG
Sbjct: 287 AGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAE 346
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR FD M+ +++ SW +IA YG+HG EAL +F QMI VKP++ TF S+L+A S
Sbjct: 347 MARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACS 406
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H+G +EEG WF+ M +Y ++P +HY CMVDLL RAG ++EA ++ SM +W
Sbjct: 407 HAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLW 466
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
+LL+ C HK + E A+++ KL+P + G + L++N +A +W++V +R ++
Sbjct: 467 GSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDR 526
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+ K PGYS+VE+ G +H F++ DK H Q+E I L++L ++++
Sbjct: 527 GLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQ 571
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 178/356 (50%), Gaps = 17/356 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED---- 71
+I +Y + +AR LF+E+P R + T+ S+I Y + + E L ++ + + E
Sbjct: 123 LIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGN 182
Query: 72 -----VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
DS L AC + + + E + A+++G + V +++L+ Y KCG+
Sbjct: 183 GEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGE 242
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQ 185
++ + F+ M KD+V W+SMI NG +A + + M K G +EV + L+
Sbjct: 243 VSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLL 302
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
ACA G R G+ +H I+ +V + TS++DMY K G ++A + F M N+ +
Sbjct: 303 ACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRS 362
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W A+I+G+ +G A L++ +M G +P+ ++ +S L AC+ GFL+ G +
Sbjct: 363 WTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG--WRWFNA 420
Query: 306 RRFDFNLVLGT----SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
++N+ G ++D+ + G A L M+ RD + W ++A+ IH
Sbjct: 421 MSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 166/331 (50%), Gaps = 15/331 (4%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
R D+ W+S+I L G E++ A+ M+K I + I++C+ L D G
Sbjct: 42 FDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSG 101
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
H ++ D+ V ++L+DMY+K G L A +F + R NIVTW +LI+G+ QN
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQN 161
Query: 257 GLAGSTLELLMEM---------QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A L + E + G DSV+++S L AC+++ + + +HG + +
Sbjct: 162 DDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI-K 220
Query: 308 FDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ V+G +++D Y+KCG S +R +FD M +D++SWN +IA Y +G +A +
Sbjct: 221 VGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEV 280
Query: 366 FLQMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
F M++ K + T ++LL A +H G + G D ++ + + ++D+
Sbjct: 281 FHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS-IIDMY 339
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G+ E A D M E + W A+++G
Sbjct: 340 CKCGQAEMARNAFDGMK-EKNVRSWTAMIAG 369
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 134/258 (51%), Gaps = 11/258 (4%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L ++ Y ++ +RK+F+++ + V ++NS+I Y++ +
Sbjct: 219 IKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAF 278
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+++ M+K + + T + L AC L++G + + +++GY N+V + +S++++
Sbjct: 279 EVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDM 338
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG+ A AF+ M+ K++ W++MI G +G REA+D + +M G+ + +
Sbjct: 339 YCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITF 398
Query: 181 MGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ ++ AC+ + G F H Y++ V+ +VD+ + G++ A ++
Sbjct: 399 ISVLAACSHAGFLEEGWRWFNAMSHEYNVEP----GVEHYGCMVDLLGRAGYIKEAYNLI 454
Query: 236 KNMS-RINIVTWGALISG 252
K+M R + V WG+L++
Sbjct: 455 KSMKVRRDFVLWGSLLAA 472
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 16/259 (6%)
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L + K+ + A + +L + K R ++ +W +LI+ A+ G + +L
Sbjct: 12 LTISFKIHKNHFSTTAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFS 71
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCG 326
M+ +P+ + A+ +C+ + L GK H V F+ +L + +++IDMYSKCG
Sbjct: 72 WMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCG 131
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI---------ETMVKPD 377
S AR LFD++ R++++W +I Y + EAL +F + + E D
Sbjct: 132 KLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVD 191
Query: 378 HSTFASLLSALSH--SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
S+LSA S + V EG + + V K+ E ++D A+ GEV + K
Sbjct: 192 SVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVEN---TLLDAYAKCGEVSLSRK 248
Query: 436 IVDSMSTEPGLAVWVALLS 454
+ D M+ E + W ++++
Sbjct: 249 VFDDMA-EKDVVSWNSMIA 266
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 317/542 (58%), Gaps = 1/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A+ LFE + R V ++NS++ Y++ + EVL L +M + + PD
Sbjct: 187 MLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPD 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + A L +G+ + + G D + +S++ +Y+KCG +N A FE
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFE 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD++ W++MI+GLV N AV ++RM K + + ++ ACA+LG
Sbjct: 307 GMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPL 366
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHGY +R+ + LD+ Q SLV MYAK GHL+ + VF MSR +IV+W A++SG AQ
Sbjct: 367 GTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQ 426
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG L L EM+ PDS+++VS L ACA IG L GK IH + + +++
Sbjct: 427 NGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILI 486
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMYSKCG A+ FD+M +DL+SW+ IIA YG HG GE AL ++ + T +
Sbjct: 487 DTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGI 546
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+H + S+LSA SH+GLV++G +F M + I+P +H AC+VDLL+RAG VEEA
Sbjct: 547 QPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAY 606
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
M +P + V LL C +G+ VA++++ L P + G + +++ +A +
Sbjct: 607 SFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMK 666
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V V M+ +KK+PG+S +E++G + F + SH Q+E+I+ VLK L EMR
Sbjct: 667 RWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMR 726
Query: 555 AI 556
+
Sbjct: 727 KV 728
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 238/435 (54%), Gaps = 6/435 (1%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SARK+F+ + R V + ++I Y+R +YN M ++ ++P S T L +
Sbjct: 101 SARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVL 160
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L+ L+ + ++ G+G+DV + +SMLN+Y KCG++ +A FE M +D++ W+S
Sbjct: 161 ELVHLQC---LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNS 217
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+++G G RE + RMK +GI+ D+ L+ A A G VHG+ +R
Sbjct: 218 LVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG 277
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L D ++TSL+ MY K G+++ A +F+ M ++++W A+ISG QN A + +
Sbjct: 278 LEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFR 337
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
M P + ++ S L ACA++G LG S+HGY +R R ++ S++ MY+KCG
Sbjct: 338 RMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCG 397
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ ++FD+M RD++SWN I++ + +GH +AL LF +M + +PD T SLL
Sbjct: 398 HLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQ 457
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + G + +G+ W V+K + P +VD+ ++ G++ A K D M + L
Sbjct: 458 ACASIGALHQGK-WIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQ-DL 515
Query: 447 AVWVALLSGCHNHKK 461
W ++++G +H K
Sbjct: 516 VSWSSIIAGYGSHGK 530
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 219/414 (52%), Gaps = 6/414 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
+YN+II S + +VL Y+ M+ D PD+ TF +KAC SL G ++
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
+ GY +D ++ +S++N Y K G A F+ M +++V W++MI G+ A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
Y M+++GI V M+GL+ +L + +H I+ DV + S++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVY 191
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
K G ++ A +F+ M ++++W +L+SG+AQ G L+LL+ M++ G EPD +
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S + A A L +GK +HG+ +R + + + TS+I MY KCG + A +F+ M +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
D+ISW +I+ + + A+++F +M+++ V P +T AS+L+A + G G
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + +I+ +V + A+ G +E++ + D MS + W A++SG
Sbjct: 372 GYIL-RQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR-DIVSWNAIVSG 423
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/537 (36%), Positives = 321/537 (59%), Gaps = 6/537 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G + ++I DI AR++F++LP + +N+II YSR + L +Y+ M
Sbjct: 53 GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V PDS TF LKAC L L+MG + + LG+ DVFV + ++ LY KC ++
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 130 AMVAFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE + + +V W+++++ NG+P EA++ + M+K + D V ++ ++ A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAF 232
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L D + G S+H ++ L ++ + SL MYAK G + A +F M N++ W
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+ISG+A+NG A +++ EM + PD++S+ SA+ ACAQ+G L+ +S++ Y V R
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY-VGR 351
Query: 308 FDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D+ ++ + +++IDM++KCG AR +FD+ RD++ W+ +I YG+HG EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ M V P+ TF LL A +HSG+V EG ++F+LM + +KI P ++HYAC++DLL
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHYACVIDLLG 470
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG +++A +++ M +PG+ VW ALLS C H+ +GE A+++ ++P + G +
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+SN +A + W+ VA VR M++ G+ K G S VEV G L AF + DKSH +YE+I
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 201/396 (50%), Gaps = 7/396 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++I + + LG F+ + +++ G + A F+ + R + W+++I G N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
++A+ Y M+ + D L++AC+ L + G VH R + DV VQ
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 216 TSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
L+ +YAK L A VF+ + IV+W A++S +AQNG LE+ M+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+PD V+LVS L A + LK G+SIH V+ + L S+ MY+KCG + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
LFD+M+S +LI WN +I+ Y +G+ EA+ +F +MI V+PD + S +SA + G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E+ R ++ V + + + ++D+ A+ G VE A ++V + + + VW A+
Sbjct: 338 SLEQARSMYE-YVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAM 395
Query: 453 LS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ G H + +I A + ++P+D+ L+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 310/541 (57%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY I +A K+FE + + + ++ +++ Y++ L L QM + +PD
Sbjct: 186 VMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPD 245
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A + L++G I A G+ + V V +++L++Y KCG A + F+
Sbjct: 246 SVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFK 305
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ K +V W++MI+G NG+ EA + +M EG V MMG++ ACA+LGD
Sbjct: 306 GMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLER 365
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + L+ +V V SL+ MY+K +D+A+ +F N+ + N VTW A+I G+AQ
Sbjct: 366 GWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQ 424
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG L L MQS G + D +LV + A A + K IHG VR D N+ +
Sbjct: 425 NGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFV 484
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY+KCG AR LFD MQ R +I+WN +I YG HG G+E L LF +M + V
Sbjct: 485 STALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAV 544
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF S++SA SHSG VEEG F M Y ++PT HY+ MVDLL RAG++++A
Sbjct: 545 KPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAW 604
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M +PG++V A+L C HK +GEK A+K+ KL+PD+ G H L++N +A
Sbjct: 605 NFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNS 664
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W++VA VR M G+ K PG S VE+ E+H F +H + + I L+ L E++
Sbjct: 665 MWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIK 724
Query: 555 A 555
A
Sbjct: 725 A 725
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 250/478 (52%), Gaps = 10/478 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I+L+ A ++FE + L+ Y+ ++ Y++ S + L + +M+ ++VR
Sbjct: 84 KVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRL 143
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ L+ C +DLK G EI + G+ +++FV +++++LY KC +++ A F
Sbjct: 144 VVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMF 203
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+MQ KDLV W++++ G NG + A+ +M++ G D V ++ ++ A AD+ R
Sbjct: 204 ERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALR 263
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G S+HGY+ R V V +L+DMY K G +A VFK M +V+W +I G A
Sbjct: 264 IGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCA 323
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QNG + ++M G P V+++ LLACA +G L+ G +H + + D N+
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVS 383
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MYSKC A ++F+ ++ + ++WN +I Y +G +EAL+LF M
Sbjct: 384 VMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQG 442
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+K D T +++AL+ + + + W + + + +VD+ A+ G ++ A
Sbjct: 443 IKLDCFTLVGVITALADFSVNRQAK-WIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTA 501
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALVS 487
K+ D M E + W A++ G H + + ++ K +K P+D+ +++S
Sbjct: 502 RKLFDMMQ-ERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVK--PNDITFLSVIS 556
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 132/303 (43%), Gaps = 44/303 (14%)
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
QT ++ ++ K G A+ VF+++ V + ++ G+A+N G L + M
Sbjct: 82 QTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMC--- 138
Query: 275 EPDSVSLVSA-----LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVP 328
D V LV L C + LK G+ IHG + F+ NL + T+V+ +Y+KC
Sbjct: 139 --DEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQI 196
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A +F++MQ +DL+SW ++A Y +GH + AL L LQM E KPD T S+L A+
Sbjct: 197 DNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAV 256
Query: 389 SHSGLVEEGR----YWF---------------DL-----------MVSKYKIQPTEKHYA 418
+ + GR Y F D+ +V K T +
Sbjct: 257 ADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWN 316
Query: 419 CMVDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
M+D A+ GE EEA M E P + +L C N G V K + KL
Sbjct: 317 TMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKL 376
Query: 476 NPD 478
D
Sbjct: 377 KLD 379
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 321/532 (60%), Gaps = 2/532 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A+K+F+ +P + V +NSII Y +K +E + ++ +MI +RP T LKA
Sbjct: 196 LADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKA 255
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C K+G + LG GNDVFV +S++++Y G A + F+ M + L+ W
Sbjct: 256 CGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISW 315
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++MI+G V NG E+ ++R+ + G D ++ LI+ C+ D G +H IR
Sbjct: 316 NAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIR 375
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ L + + T++VDMY+K G + A+ VF M + N++TW A++ G +QNG A L+L
Sbjct: 376 KELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKL 435
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
+MQ +SV+LVS + CA +G L G+++H + +R + F+ V+ +++IDMY+K
Sbjct: 436 FCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAK 495
Query: 325 CGVPSCARALFD-QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
CG A LF+ + +D+I N +I YG+HGHG AL ++ +MIE +KP+ +TF S
Sbjct: 496 CGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVS 555
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LL+A SHSGLVEEG+ F M + ++P KHYAC+VDL +RAG +EEA ++V M +
Sbjct: 556 LLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQ 615
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P V ALLSGC HK ++G ++A +++ L+ + GI+ ++SN +A +KWE V +R
Sbjct: 616 PSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIR 675
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
MR GMKK+PGYS++EV +++ F D SH + DI +L+ L LE+ A
Sbjct: 676 GLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEA 727
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 250/478 (52%), Gaps = 24/478 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK +S ++I +Y + AR +F++ L N++I + R + EV
Sbjct: 70 IIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEV 129
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ M D+ +S T ALKAC L+D ++G EI R AV G+ ++VGSSM+N
Sbjct: 130 PRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNF 189
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
VK G + +A F+ M KD+VCW+S+I G V G E++ + M G+ V M
Sbjct: 190 LVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTM 249
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L++AC G + G+ H Y + + DV V TSLVDMY+ G A+ VF +M
Sbjct: 250 ANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCS 309
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++++W A+ISG+ QNG+ + L + G DS +LVS + C+Q L+ G+ +
Sbjct: 310 RSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRIL 369
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H +R+ + +LVL T+++DMYSKCG A +F +M +++I+W ++ +G+
Sbjct: 370 HSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYA 429
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYK 409
E+AL LF QM E V + T SL+ +H G + +GR Y FD +++
Sbjct: 430 EDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT--- 486
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIG 465
+ ++D+ A+ G++ A K+ ++ + + +++ G H H ++++G
Sbjct: 487 --------SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALG 536
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
S+H I+ ++ + + L+ +Y+ G L A +VF S A+I+GF +N
Sbjct: 65 SIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQ 124
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L M SC E +S + + AL AC + ++G I VRR F +L +G+
Sbjct: 125 QHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S+++ K G + A+ +FD M +D++ WN II Y G E++ +FL+MI ++P
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244
Query: 377 DHSTFASLLSALSHSGLVEEG----RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
T A+LL A SGL + G Y L + T +VD+ + G+
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTS-----LVDMYSNLGDTGS 299
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + DSM + L W A++SG
Sbjct: 300 AALVFDSMCSR-SLISWNAMISG 321
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 323/553 (58%), Gaps = 4/553 (0%)
Query: 6 LSAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+ YG++V ++ LY + +V ARK+F+ +P R +N++I + + +
Sbjct: 136 IDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQ 195
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +M+ + VR DSST T L A L +LK+G I A+++G+G +V + +++LY
Sbjct: 196 LFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYS 255
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG +N A + F ++ R DL+ +++MI+G NG +V ++ + G ++G
Sbjct: 256 KCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVG 315
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
LI + G S+HG+ ++ + L+ V T+ +Y K +DLA H+F
Sbjct: 316 LIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKT 375
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V W A+ISG+ QNG + + L EM F P++V++ + L ACAQ+G L GK +H
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHH 435
Query: 303 YT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ N+ + T+++DMY+KCG S A LFD M ++ ++WN +I YG+HG+G E
Sbjct: 436 LIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHE 495
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL L+ +M+ P TF S+L A SH+GLV EG F MV+KY+I+P +HYACMV
Sbjct: 496 ALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMV 555
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
D+L R+G++E+AL+ + M EPG AVW LL C HK I ++++ +L+P +G
Sbjct: 556 DILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVG 615
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L+SN +++E+ + + A +R+ ++K + K PG +++EVNG H F+ D+SH+ D
Sbjct: 616 YYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATD 675
Query: 542 IVYVLKKLYLEMR 554
I L+KL +MR
Sbjct: 676 IYAKLEKLTGKMR 688
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 229/429 (53%), Gaps = 7/429 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
AR LF +P + +N ++ +S +SP + LY + + ++ PD+ T+ A+ AC
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L + + ++ GYG++VFVGS++++LY K ++ A F+ M +D V W++
Sbjct: 123 NDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MINGLV N +++ ++ M +G+ D + ++ A A+L + + G+ + +++
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
V T L+ +Y+K G ++ A +F+ ++R +++ + A+ISGF NG +++L
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
E+ G S ++V + + G L L SIHG+ V+ N + T+ +Y+K
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN 359
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD+ + +++WN +I+ Y +G E A+SLF +M++T P+ T ++LS
Sbjct: 360 EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + G + G+ W ++ ++P +VD+ A+ G + EA ++ DSMS E
Sbjct: 420 ACAQLGSLSFGK-WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNT 477
Query: 447 AVWVALLSG 455
W ++ G
Sbjct: 478 VTWNTMIFG 486
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 174/396 (43%), Gaps = 29/396 (7%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
GY D+ + + A F + + D+ ++ ++ G N P ++ Y
Sbjct: 39 GYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLY 98
Query: 166 KRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+++ + D + AC++ D L +H +SI +V V ++LVD+Y K
Sbjct: 99 THLRRNTNLSPDNFTYAFAVAACSN--DKHLML-LHAHSIIDGYGSNVFVGSALVDLYCK 155
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
+ A VF M + V W +I+G +N +++L EM + G DS ++ +
Sbjct: 156 FSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAV 215
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L A A++ LK+G I ++ F F + T +I +YSKCG + AR LF ++ DL
Sbjct: 216 LPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDL 275
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMI--------ETMVK--PDHSTFASLLSALSHSGL 393
I++N +I+ + +G E ++ LF +++ T+V P HS F L A S G
Sbjct: 276 IAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGF 335
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ + VS + + E++ A + D S E + W A++
Sbjct: 336 CVKSGIILNPTVS-----------TAFTAIYNKLNEIDLARHLFDE-SPEKTVVAWNAMI 383
Query: 454 SGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
SG + + K+++K P+ + I ++S
Sbjct: 384 SGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 320/537 (59%), Gaps = 6/537 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G + ++I DI AR++F++LP + +N+II YSR + L +Y+ M
Sbjct: 53 GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V PDS TF LKAC L L+MG + + LG+ DVFV + ++ LY KC ++
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 130 AMVAFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE + + +V W+++++ NG+P EA++ + +M+K + D V ++ ++ A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L D + G S+H ++ L ++ + SL MYAK G + A +F M N++ W
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+ISG+A+NG A +++ EM + PD++S+ SA+ ACAQ+G L+ +S++ Y V R
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY-VGR 351
Query: 308 FDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D+ ++ + +++IDM++KCG AR +FD+ RD++ W+ +I YG+HG EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ M V P+ TF LL A +HSG+V EG +WF ++ +KI P ++HYAC++DLL
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREG-WWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG +++A +++ M +PG+ VW ALLS C H+ +GE A+++ ++P + G +
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+SN +A + W+ VA VR M++ G+ K G S VEV G L AF + DKSH +YE+I
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 202/396 (51%), Gaps = 7/396 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++I + + LG F+ + +++ G + A F+ + R + W+++I G N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
++A+ Y M+ + D L++AC+ L + G VH R + DV VQ
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 216 TSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
L+ +YAK L A VF+ + IV+W A++S +AQNG LE+ +M+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+PD V+LVS L A + LK G+SIH V+ + L S+ MY+KCG + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
LFD+M+S +LI WN +I+ Y +G+ EA+ +F +MI V+PD + S +SA + G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E+ R ++ V + + + ++D+ A+ G VE A ++V + + + VW A+
Sbjct: 338 SLEQARSMYEY-VGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAM 395
Query: 453 LS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ G H + +I A + ++P+D+ L+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 323/542 (59%), Gaps = 4/542 (0%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
+I ARK+F+E P V +N+II YS + + +Y++M V PD T LK
Sbjct: 118 EIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLK 177
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC + L++G+ + + LG+ +DVFV + ++ LY KCG++ +A + FE + +++V
Sbjct: 178 ACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVS 237
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+SMI+G NG P EA+ + +M++ + D + ++ +++A D+ D G S+HG +
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ L + + SL MYAK G + +A F M N++ W A+ISG+A+NG +
Sbjct: 298 KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVG 357
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
L EM S DS+++ SA+LACAQ+G L L K + Y + + ++ + T++IDM++
Sbjct: 358 LFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFA 417
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG AR +FD+ +D++ W+ +I YG+HG G++A+ LF M + V P+ TF
Sbjct: 418 KCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVG 477
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LL+A +HSGLVEEG F M Y I+ +HYAC+VDLL R+G + EA + +M E
Sbjct: 478 LLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIE 536
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
PG++VW ALL C ++ ++GE A+++ L+P + G + +SN +A + W+ VA VR
Sbjct: 537 PGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVR 596
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGH 563
MR+ G+ K GYS++E+NG+L AF + DKSH ++++I L+ LE R + H
Sbjct: 597 ILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELES--LERRLKEAGFIPH 654
Query: 564 ME 565
+E
Sbjct: 655 IE 656
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 203/392 (51%), Gaps = 8/392 (2%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ + +N G++ A F++ + W+++I G + +A++ Y RM+
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G++ D + +++AC+ + G VHG R DV VQ LV +YAK G ++ A
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VF+ + NIV+W ++ISG+ QNGL L + +M+ +PD ++LVS L A +
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
L+ GKSIHG V+ +F L S+ MY+KCG AR+ FDQM+ +++ WN +I
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMI 343
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ Y +G+ EA+ LF +MI ++ D T S + A + G ++ + W ++K +
Sbjct: 344 SGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAK-WMGDYINKTEY 402
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKV 468
+ ++D+ A+ G V+ A ++ D + + + VW A++ G H + +I
Sbjct: 403 RNDVFVNTALIDMFAKCGSVDLAREVFDR-TLDKDVVVWSAMIVGYGLHGRGQDAIDLFY 461
Query: 469 AKKVLKLNPDD---LGIHALVSNFFAMEQKWE 497
A K + P+D +G+ ++ +E+ WE
Sbjct: 462 AMKQAGVCPNDVTFVGLLTACNHSGLVEEGWE 493
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 321/543 (59%), Gaps = 2/543 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++ T L G + +++ ++ ARKLF++ P V +N+I+ YSR
Sbjct: 98 LLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHA 157
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +Y +M V PD +F LKAC +L L+MG + + G+ +DVFV + ++ L
Sbjct: 158 IEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVAL 217
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG++ A F ++ + +V W+S+I+G NGQP EA+ + M+K + D + +
Sbjct: 218 YAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIAL 277
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ +++A D+ D G S+HG I+ L + + SL +YAK GH+ +A F +
Sbjct: 278 VSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVEN 337
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W A+ISG+ +NG A +EL M+S PDS+++ S++ ACAQIG L+L + +
Sbjct: 338 PSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWM 397
Query: 301 HGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
Y ++ F ++++ TS+ID Y+KCG AR +FD++ +D++ W+ ++ YG+HG G
Sbjct: 398 DEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQG 457
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
E++ LF M + V P+ TF LL+A +SGLVEEG F M Y I+P +HYAC
Sbjct: 458 RESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYAC 516
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL RAG ++ A V +M EPG++VW ALLS C H+ ++GE A+++ L+P +
Sbjct: 517 VVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYN 576
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G + +SN +A W+ VA VR MR+ G+ K GYSV+E+NG+L AF DK+H +
Sbjct: 577 TGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRS 636
Query: 540 EDI 542
++I
Sbjct: 637 KEI 639
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 206/409 (50%), Gaps = 12/409 (2%)
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG 156
+I+ K + G F+ + ++N G+++ A F+K D+ W++++ +G
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
A++ Y RM+ + D +++AC+ L G VHG R DV VQ
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
LV +YAK G + A+ VF + IV+W ++ISG+AQNG L + EM+ P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARA 333
D ++LVS L A + L+ GKSIHG ++ +F+L++ S+ +Y+KCG AR
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLI--SLTSLYAKCGHVMVARL 330
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
F+Q+++ LI WN +I+ Y +G+ EEA+ LF M ++PD T S ++A + G
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+E R W D +S + + ++D A+ G V+ A + D + + + VW A++
Sbjct: 391 LELAR-WMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMM 448
Query: 454 S--GCHNHKKFSIGEKVAKKVLKLNPDD---LGIHALVSNFFAMEQKWE 497
G H + SI A + ++P+D +G+ N +E+ W+
Sbjct: 449 VGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWD 497
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 315/526 (59%), Gaps = 10/526 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ + K + P S+F +K+C +L DL G +
Sbjct: 1107 VHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQ 1166
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A G+ D+FV S+++++Y KCG++ +A F+++ +++V W+SMI G V N Q
Sbjct: 1167 QAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADN 1226
Query: 161 AVDAYKRMKKE--------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
A+ +K +E + D VVM+ ++ AC+ + VHG+ +++ + +
Sbjct: 1227 ALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSI 1286
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QS 271
V +L+D YAK G ++ VF M + ++W ++I+ +AQ+GL+G LE+ M +
Sbjct: 1287 GVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRH 1346
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
G ++V+L + LLACA G L+ GK IH ++ ++N+ +GTS+IDMY KCG
Sbjct: 1347 VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 1406
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A+ FD+M+ +++ SW ++A YG+HG +EAL +F +M+ VKP++ TF S+L+A SH
Sbjct: 1407 AKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSH 1466
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GLVEEG +WF+ M KY I+P +HY CMVDL RAG + EA ++ M +P VW
Sbjct: 1467 AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWG 1526
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
+LL C HK +GE A+K+ +L+PD+ G + L+SN +A +W +V +R M+
Sbjct: 1527 SLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQ 1586
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ K PG+S+VE+ G +H F++ DK H +E I L+KL LE++ I
Sbjct: 1587 LVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKI 1632
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 202/400 (50%), Gaps = 38/400 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C + L+ +I K + G ND + +++LY G++ A++ F ++Q
Sbjct: 34 LQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+ +I NG +A+ YK M +GI AD+ +I+AC + G VHG
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS----------------------- 239
I+ + DV VQ +L+D Y K GH A VF+ M
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 240 -RI-------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
RI N+V+W A+I+G+ +N LEL MQ+ P+ ++VS + AC ++
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
G L LG+ IH Y ++ + + LGT++IDMYSKCG A +F+ M + L +WN +I
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
S G+HG G+EAL+LF +M VKPD TF +L A H V+EG +F M Y I
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 411 QPTEKHYACMVDLLARAGEVEEALKI---VDSMSTEPGLA 447
P +HY CM +L AR+ ++EA K V S++ P +
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSIC 430
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 166/328 (50%), Gaps = 31/328 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I++ LS ++I LY I A LF ++ T+N II A + +
Sbjct: 50 IIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQA 109
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L LY M+ + + D TF +KAC + + + +G+ + ++ G+ DVFV +++++
Sbjct: 110 LMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDF 169
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSM-------------------------------I 149
Y KCG A+ FEKM+ +++V W+++ I
Sbjct: 170 YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMI 229
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
NG + N QP EA++ +KRM+ E I +E M+ LI+AC ++G G +H Y+I+ +
Sbjct: 230 NGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIE 289
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
+ V + T+L+DMY+K G + A VF+ M R ++ TW ++I+ +GL L L EM
Sbjct: 290 IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ +PD+++ + L AC I +K G
Sbjct: 350 ERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 205/420 (48%), Gaps = 35/420 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE----- 70
+I +Y + AR LF+E+PLR V ++ S+I Y + E L L+ ++E
Sbjct: 1183 LIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVE 1242
Query: 71 ---DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+V DS L AC + + E + V+ G+ + VG+++++ Y KCG+
Sbjct: 1243 DGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQP 1302
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQA 186
+ F+ M+ KD + W+SMI +G EA++ + M + G+ + V + ++ A
Sbjct: 1303 LVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 1362
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA G R G +H I+ L +V V TS++DMY K G +++A F M N+ +W
Sbjct: 1363 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 1422
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+++G+ +G A L++ +M G +P+ ++ VS L AC+ G ++ G H +
Sbjct: 1423 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG--WHWFNAM 1480
Query: 307 RFDFNLVLGT----SVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGH--- 358
+ +++ G ++D++ + G + A L +M+ + D + W ++ + IH +
Sbjct: 1481 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 1540
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD------LMVSKYKIQP 412
GE A ++ PD+ + LLS L + GR W D LM ++ ++P
Sbjct: 1541 GEIAAQKLFEL-----DPDNCGYYVLLSNL----YADAGR-WADVERMRMLMKNRQLVKP 1590
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 181/344 (52%), Gaps = 12/344 (3%)
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
N A ++ + + ++ W+S+I L G EA+ A+ ++K G+ I++C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ L D G H + D+ V ++L+DMY+K G L A +F + N+V+W
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 248 ALISGFAQNGLAGSTLELL-------MEMQSCGFEP-DSVSLVSALLACAQIGFLKLGKS 299
++I+G+ QN A + L L E++ P DSV +VS L AC+++ + +
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG+ V++ FD ++ +G +++D Y+KCG P ++ +FD M+ +D ISWN +IA Y G
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 359 GEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EAL +F M+ + V+ + T +++L A +H+G + G+ D ++ K ++
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVI-KMDLEYNVCVG 1391
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++D+ + G VE A K D M E + W A+++G H +
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGR 1434
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 118/209 (56%), Gaps = 3/209 (1%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ AR++F+E+P + V ++ ++I Y R + P E L L+ +M E++ P+ T +K
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC + L +G I A++ V++G++++++Y KCG + +A+ FE M RK L
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+SMI L +G +EA++ + M++ + D + +G++ AC + + + G + + +
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCA-YFTRM 384
Query: 205 RRHLNLDVKVQ--TSLVDMYAKTGHLDLA 231
+H + + + ++YA++ +LD A
Sbjct: 385 TQHYGIAPIPEHYECMTELYARSNNLDEA 413
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 318/537 (59%), Gaps = 6/537 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G + ++I DI AR++F++LP V +N+II YSR + L +Y++M
Sbjct: 53 GFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQL 112
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V PDS TF LKAC L L+MG + + LG+ DVFV + ++ LY KC ++
Sbjct: 113 ARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGC 172
Query: 130 AMVAFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE + + +V W+++++ NG+P EA++ + +M+K + D V ++ ++ A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAF 232
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L D G S+H ++ L + + SL MYAK G + A +F M N++ W
Sbjct: 233 TCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+ISG+A+NG A ++L EM + PD++S+ SA+ ACAQ+G L+ + + Y V R
Sbjct: 293 AMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEY-VSR 351
Query: 308 FDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D+ ++ + +++IDM++KCG CAR++FD+ RD++ W+ +I YG+HG EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISL 411
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ M V P+ TF LL A +HSG+V EG +WF ++ +KI P ++HYAC++DLL
Sbjct: 412 YRAMERDGVHPNDVTFLGLLIACNHSGMVREG-WWFFNRMADHKINPQQQHYACIIDLLG 470
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG +++A +++ M +PG+ VW ALLS C H+ +G+ A+++ ++P + G +
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQ 530
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+SN +A + W+ VA VR M++ G+ K G S VEV G L F + DKSH +YE+I
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEI 587
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 200/396 (50%), Gaps = 7/396 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+I + + LG F+ + +++ G + A F+ + R + W+++I G N
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
++A+ Y +M+ + D L++AC L + G VH R DV VQ
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 216 TSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
L+ +YAK L A VF+ + IV+W A++S +AQNG LE+ +M+
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+PD V+LVS L A + L+ G+SIH ++ + L S+ MY+KCG + A+
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
LFD+M+S +LI WN +I+ Y +G ++A+ LF +MI V+PD + S +SA + G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E+ R W D VS+ + + ++D+ A+ G VE A + D + + + VW A+
Sbjct: 338 SLEQAR-WMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDR-TLDRDVVVWSAM 395
Query: 453 LS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ G H + +I A + ++P+D+ L+
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 315/527 (59%), Gaps = 10/527 (1%)
Query: 40 GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW 99
V ++NS+I +R E L ++ + K + P S+F +K+C +L DL G
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
++A G+ D+FV S+++++Y KCG++ +A F+++ +++V W+SMI G V N Q
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 160 EAVDAYKRMKKE--------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
A+ +K +E + D VVM+ ++ AC+ + VHG+ +++ +
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-Q 270
+ V +L+D YAK G ++ VF M + ++W ++I+ +AQ+GL+G LE+ M +
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
G ++V+L + LLACA G L+ GK IH ++ ++N+ +GTS+IDMY KCG
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 2278
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A+ FD+M+ +++ SW ++A YG+HG +EAL +F +M+ VKP++ TF S+L+A S
Sbjct: 2279 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H+GLVEEG +WF+ M KY I+P +HY CMVDL RAG + EA ++ M +P VW
Sbjct: 2339 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 2398
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
+LL C HK +GE A+K+ +L+PD+ G + L+SN +A +W +V +R M+
Sbjct: 2399 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 2458
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ K PG+S+VE+ G +H F++ DK H +E I L+KL LE++ I
Sbjct: 2459 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKI 2505
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 205/414 (49%), Gaps = 46/414 (11%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C + L+ +I K + G ND + +++LY G++ A++ F ++Q
Sbjct: 34 LQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+ +I NG +A+ YK M +GI AD+ +I+AC + G VHG
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS----------------------- 239
I+ + DV VQ +L+D Y K GH A VF+ M
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 240 -RI-------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
RI N+V+W A+I+G+ +N LEL MQ+ P+ ++VS + AC ++
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
G L LG+ IH Y ++ + + LGT++IDMYSKCG A +F+ M + L +WN +I
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
S G+HG G+EAL+LF +M VKPD TF +L A H V+EG +F M Y I
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 411 QPTEKHYACMVDLLARAGEVEEALKI---VDSMSTEPGLA--------VWVALL 453
P +HY CM +L AR+ ++EA K V S++ P + W LL
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVAWTQLL 444
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 166/328 (50%), Gaps = 31/328 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I++ LS ++I LY I A LF ++ T+N II A + +
Sbjct: 50 IIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQA 109
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L LY M+ + + D TF +KAC + + + +G+ + ++ G+ DVFV +++++
Sbjct: 110 LMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDF 169
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSM-------------------------------I 149
Y KCG A+ FEKM+ +++V W+++ I
Sbjct: 170 YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMI 229
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
NG + N QP EA++ +KRM+ E I +E M+ LI+AC ++G G +H Y+I+ +
Sbjct: 230 NGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIE 289
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
+ V + T+L+DMY+K G + A VF+ M R ++ TW ++I+ +GL L L EM
Sbjct: 290 IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ +PD+++ + L AC I +K G
Sbjct: 350 ERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 205/420 (48%), Gaps = 35/420 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE----- 70
+I +Y + AR LF+E+PLR V ++ S+I Y + E L L+ ++E
Sbjct: 2056 LIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVE 2115
Query: 71 ---DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+V DS L AC + + E + V+ G+ + VG+++++ Y KCG+
Sbjct: 2116 DGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQP 2175
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQA 186
+ F+ M+ KD + W+SMI +G EA++ + M + G+ + V + ++ A
Sbjct: 2176 LVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 2235
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA G R G +H I+ L +V V TS++DMY K G +++A F M N+ +W
Sbjct: 2236 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 2295
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+++G+ +G A L++ +M G +P+ ++ VS L AC+ G ++ G H +
Sbjct: 2296 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG--WHWFNAM 2353
Query: 307 RFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGH--- 358
+ +++ G ++D++ + G + A L +M+ + D + W ++ + IH +
Sbjct: 2354 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 2413
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD------LMVSKYKIQP 412
GE A ++ PD+ + LLS L + GR W D LM ++ ++P
Sbjct: 2414 GEIAAQKLFEL-----DPDNCGYYVLLSNL----YADAGR-WADVERMRMLMKNRQLVKP 2463
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 179/338 (52%), Gaps = 12/338 (3%)
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
N A ++ + + ++ W+S+I L G EA+ A+ ++K G+ I++C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ L D G H + D+ V ++L+DMY+K G L A +F + N+V+W
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 248 ALISGFAQNGLAGSTLELL-------MEMQSCGFEP-DSVSLVSALLACAQIGFLKLGKS 299
++I+G+ QN A + L L E++ P DSV +VS L AC+++ + +
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG+ V++ FD ++ +G +++D Y+KCG P ++ +FD M+ +D ISWN +IA Y G
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205
Query: 359 GEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EAL +F M+ + V+ + T +++L A +H+G + G+ D ++ K ++
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVI-KMDLEYNVCVG 2264
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ + G VE A K D M E + W A+++G
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAG 2301
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 118/209 (56%), Gaps = 3/209 (1%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ AR++F+E+P + V ++ ++I Y R + P E L L+ +M E++ P+ T +K
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC + L +G I A++ V++G++++++Y KCG + +A+ FE M RK L
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+SMI L +G +EA++ + M++ + D + +G++ AC + + + G + + +
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCA-YFTRM 384
Query: 205 RRHLNLDVKVQ--TSLVDMYAKTGHLDLA 231
+H + + + ++YA++ +LD A
Sbjct: 385 TQHYGIAPIPEHYECMTELYARSNNLDEA 413
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 334/545 (61%), Gaps = 3/545 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVR 73
RII +Y +R +F++L + + +N+I+ AY+R E + + +++++I + +
Sbjct: 146 RIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK 205
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM-V 132
PD+ T +KAC L+DL +G+ I A ++ +DVFVG++++ +Y KCG + EA+
Sbjct: 206 PDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKR 265
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M K + W++++ G N PR+A+D Y +M G+D D + L+ AC+ +
Sbjct: 266 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 325
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G +HG+++R L +D + SL+ +Y G A +F M ++V+W +I+G
Sbjct: 326 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 385
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
++QNGL + L +M S G +P ++++ AC+Q+ L+LGK +H + ++ +
Sbjct: 386 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 445
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + +S+IDMY+K G ++ +FD+++ +D+ SWNVIIA YGIHG G+EAL LF +M+
Sbjct: 446 IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 505
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+KPD TF +L A SH+GLVE+G +F+ M++ + I+P +HY C+VD+L RAG ++
Sbjct: 506 LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 565
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+AL++++ M +P +W +LLS C H +GEKVA K+L+L P+ + L+SN FA
Sbjct: 566 DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW++V VR M+ G++K G S +EV G++H F++ D+ + E++ ++L +
Sbjct: 626 GSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 685
Query: 552 EMRAI 556
++ +I
Sbjct: 686 KISSI 690
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 213/413 (51%), Gaps = 12/413 (2%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRK-AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S V L+AC D+++G + + + ND + + ++ +Y CG +++ + F
Sbjct: 105 SEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVF 164
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDS 193
+K++RK+L W+++++ N +A+ + + D + +I+ACA L D
Sbjct: 165 DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 224
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA-SHVFKNMSRINIVTWGALISG 252
G +HG + + L DV V +L+ MY K G ++ A VF M + +W AL+ G
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+AQN L+L ++M G +PD ++ S LLAC+++ L G+ IHG+ +R +
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G S++ +Y CG P A+ LFD M+ R L+SWNV+IA Y +G +EA++LF QM+
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGE 429
++P + A S + G+ +L K TE + + ++D+ A+ G
Sbjct: 405 DGIQPYEIAIMCVCGACSQLSALRLGK---ELHCFALKAHLTEDIFVSSSIIDMYAKGGC 461
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDL 480
+ + +I D + E +A W +++G H + ++ +K+L+ L PDD
Sbjct: 462 IGLSQRIFDRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDF 513
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 275 EPDSVSLVSA---------LLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYS 323
E D V L SA L AC Q +++G+ +H F + VL T +I MYS
Sbjct: 93 ESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYS 152
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFA 382
CG PS +R +FD+++ ++L WN I+++Y + E+A+S+F ++I T KPD+ T
Sbjct: 153 MCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLP 212
Query: 383 SLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
++ A +GL++ G M +K + ++ + + G VEEA+K V +
Sbjct: 213 CVIKAC--AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLM 270
Query: 442 TEPGLAVWVALLSG 455
++ W ALL G
Sbjct: 271 DTKTVSSWNALLCG 284
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 333/573 (58%), Gaps = 18/573 (3%)
Query: 1 MIKTNLSAYG------NSVGRIIALYGGKNDIVSARKLFEELPL------RGVDTY--NS 46
+I ++LS G + + R+I LY D+ SAR LF+ + +++ N+
Sbjct: 43 LIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNT 102
Query: 47 IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
++ AY+ +E + LY M + V ++ T+ LK C S + GE + + V G
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+G+D+FV ++++++Y KCG++ +A F++M +D+VCW++MI +P +A+ ++
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+M++EG DE+ + + A LGD R +SVHGY++ DV V S+V MYAK G
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCG 282
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+++ A VF M N ++W +++SG+ QNG L L +MQ+ +P+ V+ + +
Sbjct: 283 NVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVS 342
Query: 287 ACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFD--QMQSRDL 343
AC+ +G LG+ +H + + + D + L +++DMY KCG A +F+ ++ RD+
Sbjct: 343 ACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDV 402
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
SWNV+I+ YG+HGHG+EAL LF +M V+P+ TF S+LSA SH+GL++EGR F
Sbjct: 403 SSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFAD 462
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
M +K ++P KHYACMVD+L RAG + EA +++ + + P VW ALL C H
Sbjct: 463 M-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 521
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+GE A + +L P+ G + L+SN +A KW+EV VR+ M+ G+KK +SV+E
Sbjct: 522 LGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFG 581
Query: 524 GELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
E+H F D+S Y ++ ++ L +EM+ +
Sbjct: 582 TEVHGFHTADQSSPYYREVYRKVESLAIEMKMV 614
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 311/525 (59%), Gaps = 3/525 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF+ L + +N+II +S P VL Y+++ V PD TF + LKA L +
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+ + + V+ G D FV +S+++ + CG ++ + F + +KD+V W+++ING
Sbjct: 120 -ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNL 210
+ NG+ EA++ + M+ G++ DEV ++ ++ A A L D FG VHG+ + +
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
DV V ++LVDMY+K G+ D A VF M N+V+WGALI+G+ Q L++ EM
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
G EP+ ++ SAL ACAQ+G L G+ +H Y R + N LGT+++DMYSKCG
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F+++ ++D+ W +I + G +L+LF QMI + V+P+ TF +LSA +
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H GLV+EG F LM+ Y+++P HY CMVDLL RAG +EEA+K ++SM EP VW
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
AL SGC HK F +GE + ++KL P G + L++N ++ QKWE A VR+ M+
Sbjct: 479 GALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGK 538
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+ K PG S +EVNG +H FI DKSH + ++ +L+ + +++
Sbjct: 539 GVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLK 583
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 194/352 (55%), Gaps = 7/352 (1%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G + F S +L K + ++ F+++ + W+++I G + QP+ + AY
Sbjct: 35 GLAHHTFFLSDILRSATK--DLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAY 92
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
R++ G+ D L++A + L + + + ++ L+ D VQ SLV +A
Sbjct: 93 SRLRNHGVIPDRHTFPLLLKAFSKLRNEN-PFQFYAHIVKFGLDFDAFVQNSLVSAFAHC 151
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G++D + +F ++ ++V+W ALI+G +NG A LE +EM+S G E D V++VS L
Sbjct: 152 GYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVL 211
Query: 286 LACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
A A + + G+ +HG+ V R +++ +G++++DMYSKCG A +F++M +R+L
Sbjct: 212 CAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNL 271
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SW +IA Y +EAL +F +MI ++P+ ST S L+A + G +++GR W
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGR-WLHE 330
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
V + K+ K +VD+ ++ G V+EAL + + + + + W A+++G
Sbjct: 331 YVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK-DVYPWTAMING 381
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K+F E+P R + ++ ++I Y + E L ++ +MI E + P+ ST T AL AC
Sbjct: 259 AVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQ 318
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L G + G + +G++++++Y KCG ++EA++ FEK+ KD+ W++M
Sbjct: 319 LGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAM 378
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DLGDSRFGLSVHGYS 203
INGL G +++ + +M + + + V +G++ ACA D G F L + Y
Sbjct: 379 INGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDY- 437
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
L +V +VD+ + G L+ A ++M WGAL SG
Sbjct: 438 ---RLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +FE+LP + V + ++I + + L L++QMI+ V+P+
Sbjct: 347 LVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPN 406
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TF L AC + G E++R + + +V M++L + G++ EA+
Sbjct: 407 GVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFI 466
Query: 135 EKMQRKDLV-CWSSMINGLVFN 155
E M + W ++ +G + +
Sbjct: 467 ESMPMEPTPGVWGALFSGCMIH 488
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/553 (36%), Positives = 318/553 (57%), Gaps = 2/553 (0%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K +Y V +IA Y ++ SA KLF+EL R V ++NS+I L
Sbjct: 581 KLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALE 640
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
+ QM+ V D +T ++ AC ++ L +G + + V+ + +V +++L++Y
Sbjct: 641 FFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYS 700
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG +N+A+ AFEKM +K +V W+S+I V G +A+ + M+ +G+ D M
Sbjct: 701 KCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTS 760
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ ACA G VH Y + ++ L + V +L+DMYAK G ++ A VF + +
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
IV+W +I G+++N L L+L EMQ PD +++ L AC + L++G+ IHG
Sbjct: 821 IVSWNTMIGGYSKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAALEIGRGIHG 879
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+R + L + ++IDMY KCG AR LFD + +DLI+W V+I+ G+HG G E
Sbjct: 880 CILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNE 939
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A++ F +M +KPD TF S+L A SHSGL+ EG +F+ M+S+ ++P +HYACMV
Sbjct: 940 AIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMV 999
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
DLLAR G + +A ++++M +P +W ALL GC H + EKVA+ V +L PD+ G
Sbjct: 1000 DLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAG 1059
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L++N +A +KWEEV +R+ + K G+KK PG S +EV G+ F+ D +H Q +
Sbjct: 1060 YYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKS 1119
Query: 542 IVYVLKKLYLEMR 554
I +L L ++M+
Sbjct: 1120 IFSLLNNLRIKMK 1132
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 244/478 (51%), Gaps = 11/478 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEE-LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ +Y + R++F+ L V +N ++ Y++ E + L+ +M K +
Sbjct: 491 KLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGIT 550
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+S TF+ LK +L + + I +LG+G+ V +S++ Y K G+++ A
Sbjct: 551 GNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKL 610
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ +D+V W+SMI+G V NG A++ + +M + D ++ + ACA++G
Sbjct: 611 FDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSL 670
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G ++HG ++ + +V +L+DMY+K G+L+ A F+ M + +V+W +LI+ +
Sbjct: 671 SLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAY 730
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+ GL + L EM+S G PD S+ S L ACA L G+ +H Y +R+ + L
Sbjct: 731 VREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNY-IRKNNMALC 789
Query: 314 LGTS--VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L S ++DMY+KCG A +F Q+ +D++SWN +I Y + EAL LF +M +
Sbjct: 790 LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-Q 848
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEV 430
+PD T A LL A +E GR ++ +E H A ++D+ + G +
Sbjct: 849 KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNG--YSSELHVANALIDMYVKCGSL 906
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
A + D M E L W ++SGC H +I ++ + PD++ +++
Sbjct: 907 VHARLLFD-MIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSIL 963
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 190/383 (49%), Gaps = 4/383 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D + ++ L+ C L+ G+ + G + +G+ ++ +YV CG + E F
Sbjct: 450 DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIF 509
Query: 135 EKMQRKDLV-CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ + + V W+ M++ G RE++ +K+M+K GI + +++ A LG
Sbjct: 510 DHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRV 569
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+HG + V SL+ Y K+G +D A +F + ++V+W ++ISG
Sbjct: 570 GECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGC 629
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
NG + S LE ++M D +LV+++ ACA +G L LG+++HG V+ F +
Sbjct: 630 VMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREV 689
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +++DMYSKCG + A F++M + ++SW +IA+Y G ++A+ LF +M
Sbjct: 690 MFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESK 749
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD + S+L A + +++GR + + K + ++D+ A+ G +EE
Sbjct: 750 GVSPDVYSMTSVLHACACGNSLDKGRDVHNY-IRKNNMALCLPVSNALMDMYAKCGSMEE 808
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + + + + W ++ G
Sbjct: 809 AYLVFSQIPVKD-IVSWNTMIGG 830
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 304/509 (59%), Gaps = 3/509 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIK-EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
YN++I AYS ++P + +YN+M +++ D T+ KAC S ++ G+E+
Sbjct: 72 YNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVI 131
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
V +GY D F+ SS+LN Y+ CG++ A F++ KD+V W+++I G G ++
Sbjct: 132 VRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSF 191
Query: 163 DAYKRMKK-EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVD 220
+K M + + + +E MMGLI AC + + + G ++HGY ++ L VK++ +L++
Sbjct: 192 GVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN 251
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+Y K G+LD A +F + N V W +LI G+ Q G +ELL EM +PD +
Sbjct: 252 LYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFT 311
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ L ACAQ+G LG +H + ++ +++ +GT++IDMY+KCG AR +FDQM
Sbjct: 312 VSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGTALIDMYAKCGFIGAARKVFDQMNE 371
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
R++ +WN I++ Y HG E A+ LF +M E+ +PD TF ++L A +HSGLVE G+ +
Sbjct: 372 RNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQY 431
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
FDLM+ YKI P +HY CMVDLL RAG ++EA +++ M EP + VW ALLS C H
Sbjct: 432 FDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHG 491
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
IGE A ++KLN D G + +++N +A Q++ V VR+ M + G+ K G S++
Sbjct: 492 NIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMI 551
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
E+ +H F++ DK H + E+I VL +L
Sbjct: 552 EIGDVVHEFVVADKMHPRSEEIYSVLDEL 580
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 189/343 (55%), Gaps = 10/343 (2%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRPDSSTFTVAL 83
+I +A+++F+E + V +N++I Y+R+ + G++ +M++ ++VRP+ T +
Sbjct: 155 EIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLI 214
Query: 84 KACVSLMDLKMGEEI---WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
AC+ +LK+G I K + L G V + ++++NLYVKCG ++ A F+++ K
Sbjct: 215 VACIESKNLKLGRAIHGYMMKDMVLREG--VKLEAALINLYVKCGYLDGARKLFDEIPEK 272
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ V W+S+I G G E ++ + M + D + G++ ACA +G G VH
Sbjct: 273 NTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVH 332
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
++ ++ + DV + T+L+DMYAK G + A VF M+ N+ TW A++SG+A +G A
Sbjct: 333 RFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAE 391
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSV 318
S +EL EM+ G PDS++ ++ L ACA G ++ GK ++ + + +
Sbjct: 392 SAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCM 451
Query: 319 IDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGE 360
+D+ + G+ AR L M +++ W ++++ IHG+ E
Sbjct: 452 VDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIE 494
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + ARKLF+E+P + +NS+I Y + S EV+ L +M +++PD
Sbjct: 249 LINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPD 308
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC + +G + R A + G DVF+G++++++Y KCG + A F+
Sbjct: 309 RFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFD 367
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DL 190
+M +++ W+++++G +GQ A++ + M++ G D + + ++ ACA +
Sbjct: 368 QMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVEN 427
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGAL 249
G F L + Y I V+ +VD+ + G L A + K M N+V WGAL
Sbjct: 428 GKQYFDLMLQYYKIPPR----VEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGAL 483
Query: 250 ISGFAQNG 257
+S + +G
Sbjct: 484 LSACSIHG 491
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/510 (38%), Positives = 300/510 (58%), Gaps = 3/510 (0%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++N+ + +R+ E L LY QM+ P++ TF A K+C SL G ++
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPRE 160
++ G + FV +S++++Y KC + A F++ R VC++++I G N + +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
AV +++M+KEG+ + V M+GLI CA FG S+H S+R L+ D+ V L+
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY + G +D A +F M ++TW A+ISG+AQNGLAG L+L +M+ G PD V+
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 281 LVSALLACAQIGFLKLGKSI-HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
LV L +CA +G G+ + + F FN L ++I+MY++CG ARA+FD M
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+++ISW IIA YG+HG GE A+ LF +MI + PD + F S+LSA SH+GL E+G Y
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+F M Y +QP +HY+C+VDLL RAG +EEA K++ SMS EP AVW ALL C H
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
+ + E +KV++ P ++G + L+SN F+ E + VR MR+ +KK PG S
Sbjct: 443 RNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSY 502
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
VE G +H F+ D++H Q ++I ++L L
Sbjct: 503 VEYQGRIHLFLAGDRTHPQAQEIYHMLDGL 532
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 198/403 (49%), Gaps = 11/403 (2%)
Query: 16 IIALYGGKNDIVSARKLFEE--LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++Y + I SARK+F+E YN++I YS + + L+ QM KE V
Sbjct: 97 LISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVS 156
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ T + C + L G + +V G D+ VG+ +L +YV+CG ++ A
Sbjct: 157 VNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKL 216
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M K L+ W++MI+G NG +D Y++M+ GI D V ++G++ +CA LG
Sbjct: 217 FDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAH 276
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G V + ++ +L++MYA+ G+L A +F M+ N+++W A+I+G+
Sbjct: 277 AAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGY 336
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G ++L EM S PD + VS L AC+ G + K ++ +T D+ L
Sbjct: 337 GMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTE--KGLYYFTAMERDYGLQ 394
Query: 314 LG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
G + V+D+ + G AR L M D W ++ + IH + E A F +
Sbjct: 395 PGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEK 454
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
+IE +P + + LLS + EG +M+ + K++
Sbjct: 455 VIE--FEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLK 495
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 5/243 (2%)
Query: 12 SVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG ++ +Y + ARKLF+ +P +G+ T+N++I Y++ VL LY +M
Sbjct: 195 SVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFT 254
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ PD T L +C L G E+ ++ G+G + F+ ++++N+Y +CG + +A
Sbjct: 255 GIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKA 314
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ M K+++ W+++I G +GQ AV + M D + ++ AC+
Sbjct: 315 RAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA 374
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
G + GL + ++ R L + + +VD+ + G L+ A + +MS + WG
Sbjct: 375 GLTEKGL-YYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 248 ALI 250
AL+
Sbjct: 434 ALL 436
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 316/540 (58%), Gaps = 2/540 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSS 77
+Y AR++F+ +P+R +N+++ Y+R + + +M +E+ RPDS
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
T L AC + L E A+ G V V +++L+ Y KCG + A V F+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
K+ V W++MI+G NG REA+ + RM +EG+D +V ++ +QAC +LG G+
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
VH +R L+ +V V +L+ MY+K +DLASHVF + R V+W A+I G AQNG
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGT 316
+ + L MQ +PDS +LVS + A A I + IHGY++R D ++ + T
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++IDMY+KCG + AR LF+ + R +I+WN +I YG HG G+ A+ LF +M + P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ +TF S+LSA SH+GLV+EGR +F M Y ++P +HY MVDLL RAG+++EA
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKW 496
+ M +PGL+V+ A+L C HK + E+ A+K+ +L P + H L++N +A W
Sbjct: 523 IQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMW 582
Query: 497 EEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
++VA VR M K+G++K PG+S++++ E+H F +H Q ++I L KL E++A+
Sbjct: 583 KDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAV 642
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 184/341 (53%), Gaps = 6/341 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I++ L N I+ Y DI +AR +F+ +P + ++N++I Y++ E L
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+N+M++E V + AL+AC L L G + V +G ++V V ++++ +Y
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC +++ A F+++ R+ V W++MI G NG +AV + RM+ E + D ++
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I A AD+ D +HGYSIR HL+ DV V T+L+DMYAK G +++A +F +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+++TW A+I G+ +G + +EL EM+S G P+ + +S L AC+ G + G+
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREY- 486
Query: 302 GYTVRRFDFNLVLGT----SVIDMYSKCGVPSCARALFDQM 338
+T + D+ L G +++D+ + G A A +M
Sbjct: 487 -FTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 5/420 (1%)
Query: 42 DTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRK 101
D + + + +R + P L + M P TFT LK C + DL G + +
Sbjct: 26 DHHARLRASAARSDLP-AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQ 84
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
G ++ +++ N+Y KC + +A F++M +D V W++++ G NG R A
Sbjct: 85 LAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMA 144
Query: 162 VDAYKRMK-KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
++ RM+ +EG D + ++ ++ ACA+ H ++IR L V V T+++D
Sbjct: 145 MEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILD 204
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
Y K G + A VF M N V+W A+I G+AQNG + L L M G + VS
Sbjct: 205 AYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVS 264
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
+++AL AC ++G L G +H VR D N+ + ++I MYSKC A +FD++
Sbjct: 265 VLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD 324
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
R +SWN +I +G E+A+ LF +M VKPD T S++ AL+ + R
Sbjct: 325 RRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR- 383
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
W + + ++D+ A+ G V A +I+ + + E + W A++ G +H
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSH 442
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ L + + + +I +Y + A +F+EL R ++N++I+ ++ +
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M E+V+PDS T + A + D I ++ L DV+V ++++++
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG++N A + F + + ++ W++MI+G +G + AV+ ++ MK GI +E
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ ++ AC+ G G + S++ L+ ++ ++VD+ + G LD A + M
Sbjct: 468 LSVLSACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 316/540 (58%), Gaps = 2/540 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSS 77
+Y AR++F+ +P+R +N+++ Y+R + + +M +E+ RPDS
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
T L AC + L E A+ G V V +++L+ Y KCG + A V F+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
K+ V W++MI+G NG REA+ + RM +EG+D +V ++ +QAC +LG G+
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
VH +R L+ +V V +L+ MY+K +DLASHVF + R V+W A+I G AQNG
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGT 316
+ + L MQ +PDS +LVS + A A I + IHGY++R D ++ + T
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++IDMY+KCG + AR LF+ + R +I+WN +I YG HG G+ A+ LF +M + P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ +TF S+LSA SH+GLV+EGR +F M Y ++P +HY MVDLL RAG+++EA
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKW 496
+ M +PGL+V+ A+L C HK + E+ A+K+ +L P + H L++N +A W
Sbjct: 523 IQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMW 582
Query: 497 EEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
++VA VR M K+G++K PG+S++++ E+H F +H Q ++I L KL E++A+
Sbjct: 583 KDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAV 642
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 184/341 (53%), Gaps = 6/341 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I++ L N I+ Y DI +AR +F+ +P + ++N++I Y++ E L
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+N+M++E V + AL+AC L L G + V +G ++V V ++++ +Y
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC +++ A F+++ R+ V W++MI G NG +AV + RM+ E + D ++
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I A AD+ D +HGYSIR HL+ DV V T+L+DMYAK G +++A +F +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+++TW A+I G+ +G + +EL EM+S G P+ + +S L AC+ G + G+
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREY- 486
Query: 302 GYTVRRFDFNLVLGT----SVIDMYSKCGVPSCARALFDQM 338
+T + D+ L G +++D+ + G A A +M
Sbjct: 487 -FTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 197/401 (49%), Gaps = 4/401 (0%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + M P TFT LK C + DL G + + G ++ +++ N+
Sbjct: 44 LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEVV 179
Y KC + +A F++M +D V W++++ G NG R A++ RM+ +EG D +
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++ ACA+ H ++IR L V V T+++D Y K G + A VF M
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP 223
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N V+W A+I G+AQNG + L L M G + VS+++AL AC ++G L G
Sbjct: 224 TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMR 283
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H VR D N+ + ++I MYSKC A +FD++ R +SWN +I +G
Sbjct: 284 VHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
E+A+ LF +M VKPD T S++ AL+ + R W + +
Sbjct: 344 SEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-WIHGYSIRLHLDQDVYVLT 402
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++D+ A+ G V A +I+ + + E + W A++ G +H
Sbjct: 403 ALIDMYAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSH 442
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 4/298 (1%)
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ A+ M G L++ CA GD G +VH R ++ + T+L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSV 279
MYAK A VF M + V W AL++G+A+NGLA +E+++ MQ G PDS+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQM 338
+LVS L ACA L + H + +R LV + T+++D Y KCG AR +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+++ +SWN +I Y +G EAL+LF +M+E V + + L A G ++EG
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+L+V + + ++ + ++ V+ A + D + ++ W A++ GC
Sbjct: 283 RVHELLV-RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGC 338
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ L + + + +I +Y + A +F+EL R ++N++I+ ++ +
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M E+V+PDS T + A + D I ++ L DV+V ++++++
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG++N A + F + + ++ W++MI+G +G + AV+ ++ MK GI +E
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ ++ AC+ G G + S++ L+ ++ ++VD+ + G LD A + M
Sbjct: 468 LSVLSACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 308/537 (57%), Gaps = 1/537 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + ARK+F+ +P R + ++N+I+ YS+ L + M +E+++P T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L A +L + +G+EI A+ G+ + V + ++++++Y KCG + A F+ M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+++V W+SMI+ V N P+EA+ +++M EG+ +V +MG + ACADLGD G
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H S+ L+ +V V SL+ MY K +D A+ +F + +V+W A+I GFAQNG
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L +M+S +PD+ + VS + A A++ K IHG +R D N+ + T+
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMY+KCG AR +FD M R + +WN +I YG HG G+ AL LF +M + +KP+
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
TF S++SA SHSGLVE G F +M Y I+ + HY MVDLL RAG + EA +
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
M +P + V+ A+L C HK + EK A+++ +LNPDD G H L++N + WE
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+V VR +M + G++K PG S+VE+ E+H+F +H + I L+KL ++
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 246/467 (52%), Gaps = 7/467 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++L+ + A ++FE + + Y++++ +++ + L + +M +DV P
Sbjct: 74 KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT LK C +L++G+EI V+ G+ D+F + + N+Y KC ++NEA F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DLV W++++ G NG R A++ K M +E + + ++ ++ A + L
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY++R + V + T+LVDMYAK G L+ A +F M N+V+W ++I +
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN + + +M G +P VS++ AL ACA +G L+ G+ IH +V D N+
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MY KC A ++F ++QSR L+SWN +I + +G +AL+ F QM
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
VKPD T+ S+++A++ + + W +V + + +VD+ A+ G + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAK-WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLN 476
I D MS E + W A++ G H + E++ K +K N
Sbjct: 493 RLIFDMMS-ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 166/282 (58%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + +AR+LF+ + R V ++NS+I AY + E+P E + ++ +M+ E V+P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ AL AC L DL+ G I + +VELG +V V +S++++Y KC +++ A F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+Q + LV W++MI G NG+P +A++ + +M+ + D + +I A A+L +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HG +R L+ +V V T+LVDMYAK G + +A +F MS ++ TW A+I G+
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+G + LEL EMQ +P+ V+ +S + AC+ G ++ G
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 196/374 (52%), Gaps = 6/374 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C SL +L+ +I + G + F + +++L+ + G ++EA FE + K
Sbjct: 44 LERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V + +M+ G +A+ + RM+ + ++ L++ C D + R G +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
++ +LD+ T L +MYAK ++ A VF M ++V+W +++G++QNG+A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
LE++ M +P +++VS L A + + + +GK IHGY +R FD + + T+++DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG AR LFD M R+++SWN +I +Y + + +EA+ +F +M++ VKP +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
L A + G +E GR+ L V + + ++ + + EV+ A + +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSV-ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 442 TEPGLAVWVALLSG 455
+ L W A++ G
Sbjct: 400 SRT-LVSWNAMILG 412
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I++Y ++ +A +F +L R + ++N++I+ +++ P + L ++QM V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ T+ + A L + I + +VFV ++++++Y KCG + A +
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M + + W++MI+G +G + A++ ++ M+K I + V + +I AC+ G
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLA 231
GL Y ++ + ++++ + ++VD+ + G L+ A
Sbjct: 555 VEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 318/540 (58%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + + ARK+F+++P R +N++I R + + ++ M+ + VR D
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T L A + ++K+G I A++LG+ D +V + +++++ KC ++ A + F
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFG 263
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ DLV ++++I+G NG+ AV ++ + G M+GLI + G
Sbjct: 264 MIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 323
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ G+ ++ L V T+L +Y++ +DLA +F S + W A+ISG+AQ
Sbjct: 324 ACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQ 383
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
+GL + L EM + F P+ V++ S L ACAQ+G L GKS+H + + N+ +
Sbjct: 384 SGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYV 443
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T++IDMY+KCG S A LFD ++ ++WN +I YG+HG+G+EAL LF +M+
Sbjct: 444 STALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGF 503
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P TF S+L A SH+GLV EG F MV+KY+I+P +HYACMVD+L RAG++E+AL
Sbjct: 504 QPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKAL 563
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M EPG AVW LL C HK ++ ++++ +L+P ++G + L+SN +++E+
Sbjct: 564 EFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVER 623
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ + A VR+ ++K + K PG +++EVNG H F+ D+SH+Q I L++L +MR
Sbjct: 624 NFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMR 683
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 216/429 (50%), Gaps = 8/429 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACV 87
AR LF +P + +N +I +S + Y ++K + PD+ T+ A+ A
Sbjct: 59 ARALFFSVPKPDIFLFNVLIKGFSFSPDASSI-SFYTHLLKNTTLSPDNFTYAFAISASP 117
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
D +G + AV G+ +++FV S++++LY K ++ A F+KM +D V W++
Sbjct: 118 ---DDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNT 174
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI GLV N ++V +K M +G+ D + ++ A A++ + + G+ + +++
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ D V T L+ +++K +D A +F + + ++V++ ALISGF+ NG ++
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFR 294
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDMYSKCG 326
E+ G S ++V + + G L L I G+ V+ + T++ +YS+
Sbjct: 295 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLN 354
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD+ + + +WN +I+ Y G E A+SLF +M+ T P+ T S+LS
Sbjct: 355 EIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILS 414
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + G + G+ L+ SK Q A ++D+ A+ G + EA ++ D +++E
Sbjct: 415 ACAQLGALSFGKSVHQLIKSKNLEQNIYVSTA-LIDMYAKCGNISEASQLFD-LTSEKNT 472
Query: 447 AVWVALLSG 455
W ++ G
Sbjct: 473 VTWNTMIFG 481
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 6/258 (2%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
H IR D+ T L G A +F ++ + +I + LI GF+ +
Sbjct: 27 THAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPD 86
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTS 317
A S +++ PD+ + A+ A LG +H + V FD NL + ++
Sbjct: 87 ASSISFYTHLLKNTTLSPDNFTYAFAISASPDD---NLGMCLHAHAVVDGFDSNLFVASA 143
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++D+Y K + AR +FD+M RD + WN +I + ++++ +F M+ V+ D
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+T A++L A++ V+ G + K + ++ + ++ +V+ A +++
Sbjct: 204 STTVATVLPAVAEMQEVKVG-MGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTA-RLL 261
Query: 438 DSMSTEPGLAVWVALLSG 455
M +P L + AL+SG
Sbjct: 262 FGMIRKPDLVSYNALISG 279
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/532 (37%), Positives = 316/532 (59%), Gaps = 2/532 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I ARKLF+E V +N+II +YSR + + +Y M V PD TF LKA
Sbjct: 104 ICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKA 163
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C L+D + I + ++ G+G+DVFV + ++ LY KCG + A V F+ + + +V W
Sbjct: 164 CTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSW 223
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+S+I+G NG+ EA+ + +M+ G+ D + ++ +++A D+ D G S+HG+ I+
Sbjct: 224 TSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIK 283
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L + + SL YAK G + +A F M N++ W A+ISG+A+NG A + L
Sbjct: 284 MGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNL 343
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
M S +PDSV++ SA+LA AQ+G L+L + + Y + + ++ + TS+IDMY+K
Sbjct: 344 FHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAK 403
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG AR +FD+ +D++ W+ +I YG+HG G EA++L+ M + V P+ TF L
Sbjct: 404 CGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGL 463
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+A +HSGLV+EG F M ++I P +HY+C+VDLL RAG + EA + + EP
Sbjct: 464 LTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEP 522
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
G++VW ALLS C ++ ++GE A K+ L+P + G + +SN +A W+ VA VR
Sbjct: 523 GVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRV 582
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
MR+ G+ K GYSV+E+NG+L AF + DKSH ++I L++L ++ +
Sbjct: 583 LMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEV 634
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 201/363 (55%), Gaps = 7/363 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++I + V G ++ F+ + ++N G++ A F++ D+ W+++I N
Sbjct: 73 DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRN 132
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS--VHGYSIRRHLNLDVK 213
R+ V+ Y+ M+ G+ D +++AC +L D FGLS +HG I+ DV
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLD--FGLSCIIHGQIIKYGFGSDVF 190
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
VQ LV +YAK GH+ +A VF + IV+W ++ISG+AQNG A L + +M++ G
Sbjct: 191 VQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+PD ++LVS L A + L+ G+SIHG+ ++ + L S+ Y+KCG+ + A+
Sbjct: 251 VKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAK 310
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+ FDQM++ ++I WN +I+ Y +GH EEA++LF MI +KPD T S + A + G
Sbjct: 311 SFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG 370
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E + W D VSK ++D+ A+ G VE A ++ D +++ + +W A+
Sbjct: 371 SLELAQ-WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDR-NSDKDVVMWSAM 428
Query: 453 LSG 455
+ G
Sbjct: 429 IMG 431
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 140/282 (49%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ALY I A+ +F+ L R + ++ SII Y++ E L +++QM V+PD
Sbjct: 195 LVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPD 254
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
L+A + DL+ G I +++G ++ + S+ Y KCG + A F+
Sbjct: 255 WIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFD 314
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ +++ W++MI+G NG EAV+ + M I D V + + A A +G
Sbjct: 315 QMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLEL 374
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ Y + + D+ V TSL+DMYAK G ++ A VF S ++V W A+I G+
Sbjct: 375 AQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGL 434
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+G + L M+ G P+ V+ + L AC G +K G
Sbjct: 435 HGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG 476
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 7 SAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S YG+ + +I +Y + AR++F+ + V ++++I+ Y +E + L
Sbjct: 385 SNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINL 444
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVGSSMLNLY 121
Y+ M + V P+ TF L AC +K G E++ K E+ N+ + S +++L
Sbjct: 445 YHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHY--SCVVDLL 502
Query: 122 VKCGKMNEAMVAFEKM 137
+ G + EA K+
Sbjct: 503 GRAGYLGEACAFIMKI 518
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 323/539 (59%), Gaps = 9/539 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I AR LF+++ R + T+ +I Y+ E L L+ +M +E V PD
Sbjct: 71 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 130
Query: 76 SSTFTVALKACVSLMDLK----MGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ AC L + + + I RK +L DV +G++M+++Y KCG + A
Sbjct: 131 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL----DVILGTAMIDMYAKCGCVESAR 186
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++M+ K+++ WS+MI ++GQ R+A+D ++ M G+ D++ + L+ AC+DL
Sbjct: 187 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLK 246
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ + G +H + L+LD V +LVDMY K ++ A +F M ++VTW +I
Sbjct: 247 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIG 306
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+A+ G A +L L +M+ G PD V++V+ + ACA++G + ++I Y R+ F
Sbjct: 307 GYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 366
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+++LGT++IDM++KCG AR +FD+M+ +++ISW+ +IA+YG HG G +AL LF M+
Sbjct: 367 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 426
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + P+ T SLL A SH+GLVEEG +F LM Y ++ KHY C+VDLL RAG +
Sbjct: 427 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRL 486
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EALK+++SM+ E +W A L C HK + EK A +L+L P + G + L+SN +
Sbjct: 487 DEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIY 546
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A +WE+VA R M + +KK+PG++ +EV+ + H F + D +H + ++I +LK L
Sbjct: 547 ANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSL 605
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 228/419 (54%), Gaps = 12/419 (2%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
G + ++I+ RPD+ T ++AC L +L+MG I + G D FV ++++++
Sbjct: 15 FGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDM 74
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVKC ++ +A F+KMQ +DLV W+ MI G G+ E++ +++M++EG+ D+V M
Sbjct: 75 YVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAM 134
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ ACA LG + Y R+ LDV + T+++DMYAK G ++ A +F M
Sbjct: 135 VTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE 194
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+++W A+I+ + +G L+L M S G PD ++L S L AC+ + L++G+ I
Sbjct: 195 KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLI 254
Query: 301 HGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H + V +F D + + +++DMY KC AR LFD+M RDL++W V+I Y G+
Sbjct: 255 H-HIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGN 313
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
E+L LF +M E V PD +++ A + G + + R D + + K Q
Sbjct: 314 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKART-IDDYIQRKKFQLDVILGT 372
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
M+D+ A+ G VE A +I D M E + W A+++ H + +K L L P
Sbjct: 373 AMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ-------GRKALDLFP 423
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 171/311 (54%), Gaps = 7/311 (2%)
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M+ G G ++ + + G D + +I+AC DL + + G +H +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+LD V +LVDMY K ++ A +F M ++VTW +I G+A+ G A +L L
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
+M+ G PD V++V+ + ACA++G + + I Y R +F +++LGT++IDMY+KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR +FD+M+ +++ISW+ +IA+YG HG G +AL LF M+ + + PD T ASLL
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEP 444
A S ++ GR ++ YK H+ C +VD+ + E+E+A + D M E
Sbjct: 241 ACSDLKNLQMGRLIHHIV---YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ER 296
Query: 445 GLAVWVALLSG 455
L W ++ G
Sbjct: 297 DLVTWTVMIGG 307
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 309/529 (58%), Gaps = 1/529 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A+ LFE + R V ++NS++ Y++ + EVL L +M + + PD
Sbjct: 187 MLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPD 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + A L +G+ + + G D + +S++ +Y+KCG +N A FE
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFE 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD++ W++MI+GLV N AV ++RM K + + ++ ACA+LG
Sbjct: 307 GMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPL 366
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHGY +R+ + LD+ Q SLV MYAK GHL+ + VF MSR +IV+W A++SG AQ
Sbjct: 367 GTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQ 426
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG L L EM+ PDS+++VS L ACA IG L GK IH + + +++
Sbjct: 427 NGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILI 486
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMYSKCG A+ FD+M +DL+SW+ IIA YG HG GE AL ++ + T +
Sbjct: 487 DTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGI 546
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+H + S+LSA SH+GLV++G +F M + I+P +H AC+VDLL+RAG VEEA
Sbjct: 547 QPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAY 606
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
M +P + V LL C +G+ VA++++ L P + G + +++ +A +
Sbjct: 607 SFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMK 666
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+W+ V V M+ +KK+PG+S +E++G + F + SH Q+E+I+
Sbjct: 667 RWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEII 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 241/447 (53%), Gaps = 6/447 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y SARK+F+ + R V + ++I Y+R +YN M ++ ++P
Sbjct: 89 LINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPS 148
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L + L+ L+ + ++ G+G+DV + +SMLN+Y KCG++ +A FE
Sbjct: 149 SVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE 205
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D++ W+S+++G G RE + RMK +GI+ D+ L+ A A
Sbjct: 206 LMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGV 265
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHG+ +R L D ++TSL+ MY K G+++ A +F+ M ++++W A+ISG Q
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ 325
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N A + + M P + ++ S L ACA++G LG S+HGY +R R ++
Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPS 385
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++ MY+KCG + ++FD+M RD++SWN I++ + +GH +AL LF +M +
Sbjct: 386 QNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ 445
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD T SLL A + G + +G+ W V+K + P +VD+ ++ G++ A
Sbjct: 446 RPDSITVVSLLQACASIGALHQGK-WIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQ 504
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKK 461
K D M + L W ++++G +H K
Sbjct: 505 KCFDRMPQQ-DLVSWSSIIAGYGSHGK 530
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 219/414 (52%), Gaps = 6/414 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
+YN+II S + +VL Y+ M+ D PD+ TF +KAC SL G ++
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
+ GY +D ++ +S++N Y K G A F+ M +++V W++MI G+ A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
Y M+++GI V M+GL+ +L + +H I+ DV + S++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVY 191
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
K G ++ A +F+ M ++++W +L+SG+AQ G L+LL+ M++ G EPD +
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S + A A L +GK +HG+ +R + + + TS+I MY KCG + A +F+ M +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
D+ISW +I+ + + A+++F +M+++ V P +T AS+L+A + G G
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + +I+ +V + A+ G +E++ + D MS + W A++SG
Sbjct: 372 GYIL-RQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR-DIVSWNAIVSG 423
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 311/525 (59%), Gaps = 5/525 (0%)
Query: 29 ARKLFEELPLRGVDTYNSII--IAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC 86
A L +L + YN+II +A S +S E L +Y QM+ + + PD+ T LKAC
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSNNDS-IEGLVVYKQMLSKGIVPDNYTIPFVLKAC 135
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
++ GEE+ +A+++G +DV+V ++++ +Y C + A F+ ++DLV W+
Sbjct: 136 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWT 195
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI G V G RE V + M E + AD + ++ ++ +CA LGD R G +H Y IR
Sbjct: 196 TMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRN 255
Query: 207 -HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
++NLDV V +LVDMY K G + A VF+ M N+V+W ++ISG AQ G +L +
Sbjct: 256 SNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYM 315
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
+MQ G +PD V+LV+ L +CA +G L+LGK +H Y R + + +G +++DMY+K
Sbjct: 316 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 375
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F M +D+ S+ +I +HG G +AL LF +M + ++PD TF +
Sbjct: 376 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 435
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+A SH GLVEEGR +F+ M + Y ++P +HY CMVDLL RAG + EA + + +M EP
Sbjct: 436 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEP 495
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
V ALL C H K +GE V KK+ K+ P G + L+SN ++ +W + +RK
Sbjct: 496 DAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 555
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
TM++ ++K PG S +E++G +H F DKSH + ++I +L ++
Sbjct: 556 TMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEI 600
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 222/427 (51%), Gaps = 37/427 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + I SARK+F+ P R + ++ ++I Y + E +GL+ +M E+++ D
Sbjct: 166 LMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQAD 225
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAF 134
T + L +C L DL++G ++ R + N DVFVG++++++Y+KCG N A F
Sbjct: 226 GMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVF 285
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M K++V W+SMI+GL GQ +E++ +++M++ G+ D+V ++ ++ +CA+LG
Sbjct: 286 QEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLE 345
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH Y R + D + +LVDMYAK G +D A VF+ M+R ++ ++ A+I G A
Sbjct: 346 LGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLA 405
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G G L+L EM G EPD V+ V L AC+ +G ++ G+ + F+
Sbjct: 406 MHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR-------KYFE----- 453
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
DM S L Q++ + ++ G G EA M +
Sbjct: 454 -----DM-------STIYNLRPQLE-----HYGCMVDLLGRAGLINEAEEFIRNM---PI 493
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYACMVDLLARAGEVEEA 433
+PD +LL A G VE G +M KI+P + Y M ++ + A +A
Sbjct: 494 EPDAFVLGALLGACKIHGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDA 550
Query: 434 LKIVDSM 440
LK+ +M
Sbjct: 551 LKLRKTM 557
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 322/543 (59%), Gaps = 1/543 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ + + + ++ +Y + AR +F+ L + ++N++I Y + +
Sbjct: 54 IIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDA 113
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M E V+P++ T+ + LKAC SL LK G+E+ G +DV VG+++L +
Sbjct: 114 MRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRM 173
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +NEA F+ + D++ W+ MI +G +EA +M++EG + +
Sbjct: 174 YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY 233
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ ACA G ++ VH +++ L LDV+V T+LV MYAK+G +D A VF M
Sbjct: 234 VSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV 293
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V+W +I FA++G +L ++MQ+ G +PD++ +S L ACA G L+ K I
Sbjct: 294 RDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKI 353
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + + + ++ +GT+++ MYSK G AR +FD+M+ R+++SWN +I+ HG G
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLG 413
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++AL +F +M VKPD TF ++LSA SH+GLV+EGR + M Y I+P H C
Sbjct: 414 QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNC 473
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG + EA +D+M+ +P A W ALL C + +GE VAK+ LKL+P +
Sbjct: 474 MVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKN 533
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN +A KW+ V+ VR MR+ G++K PG S +EV+ ++H F++ D SH +
Sbjct: 534 AATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPEC 593
Query: 540 EDI 542
++I
Sbjct: 594 KEI 596
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 213/390 (54%), Gaps = 11/390 (2%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS + LK C+ DL +++ ++ + V +++L++Y++CG++ EA F
Sbjct: 27 DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ + +K W++MI G V + +A+ ++ M EG+ + M +++ACA L +
Sbjct: 87 DALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALK 146
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G VH L DV+V T+L+ MY K G ++ A +F N+ +I++W +I +A
Sbjct: 147 WGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA 206
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
Q+G L+++M+ GF+P++++ VS L ACA G LK K +H + + + ++
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+GT+++ MY+K G AR +FD+M+ RD++SWNV+I ++ HG G EA LFLQM
Sbjct: 267 VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG 326
Query: 374 VKPDHSTFASLLSALSHSGLVEE----GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
KPD F S+L+A + +G +E R+ D ++ + +V + +++G
Sbjct: 327 CKPDAIMFLSILNACASAGALEWVKKIHRHALD-----SGLEVDVRVGTALVHMYSKSGS 381
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+++A + D M + W A++SG H
Sbjct: 382 IDDARVVFDRMKVR-NVVSWNAMISGLAQH 410
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 144/277 (51%), Gaps = 12/277 (4%)
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ D + + +++ C D VH I+ + + V +L+ +Y + G L
Sbjct: 21 QRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQ 80
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF + + + +W A+I+G+ ++ A + L EM G +P++ + + L ACA
Sbjct: 81 EARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACA 140
Query: 290 QIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ LK GK +H +R + ++ +GT+++ MY KCG + AR +FD + + D+ISW
Sbjct: 141 SLSALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWT 199
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
V+I +Y G+G+EA L LQM + KP+ T+ S+L+A + G ++ W V +
Sbjct: 200 VMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK----WVK-RVHR 254
Query: 408 YKIQP----TEKHYACMVDLLARAGEVEEALKIVDSM 440
+ + + +V + A++G +++A + D M
Sbjct: 255 HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 307/530 (57%), Gaps = 2/530 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACV 87
AR++F+ +P R +N+++ Y+R +G+ +M +ED RPD+ T L AC
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L E+ AV G+ V V +++L++Y KCG ++ A F+ MQ ++ V W++
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G NG EA+ +KRM EG+D +V ++ + AC +LG G VH +R
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L +V V +L+ MY K DLA+ VF + V+W A+I G QNG + + L
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
MQ +PDS +LVS + A A I + IHGY++R D ++ + T++IDMY+KCG
Sbjct: 519 RMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCG 578
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
S AR+LF+ + R +I+WN +I YG HG G+ A+ LF +M + P+ +TF S+LS
Sbjct: 579 RVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLS 638
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SH+GLV+EG+ +F M Y ++P +HY MVDLL RAG++ EA + M EPG+
Sbjct: 639 ACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGI 698
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+V+ A+L C HK + E+ A+++ +L P++ H L++N +A W++VA VR M
Sbjct: 699 SVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAM 758
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
K G++K PG+S+V++ E+H F +H Q +DI L KL E++A+
Sbjct: 759 EKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAV 808
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 197/391 (50%), Gaps = 10/391 (2%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P TFT LK C + DL G + + G + +++ N+Y KC + +A
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACAD--- 189
F++M +D V W++++ G NG AV RM++E G D V ++ ++ ACAD
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQA 342
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LG R VH +++R + V V T+++D+Y K G +D A VF M N V+W A+
Sbjct: 343 LGACR---EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAM 399
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
I G+A+NG A L L M G + VS+++AL AC ++GFL G+ +H VR
Sbjct: 400 IKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGL 459
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ N+ + ++I MY KC A +FD++ + +SWN +I +G E+A+ LF +
Sbjct: 460 ESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSR 519
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M VKPD T S++ AL+ + R W + + ++D+ A+ G
Sbjct: 520 MQLENVKPDSFTLVSIIPALADISDPLQAR-WIHGYSIRLHLDQDVYVLTALIDMYAKCG 578
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
V A + +S + + + W A++ G +H
Sbjct: 579 RVSIARSLFNS-ARDRHVITWNAMIHGYGSH 608
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 193/376 (51%), Gaps = 9/376 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + SARK+F+ + R ++N++I Y+ E L L+ +M+ E V
Sbjct: 368 ILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVT 427
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ AL AC L L G + V +G ++V V ++++ +Y KC + + A F+
Sbjct: 428 DVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFD 487
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ K V W++MI G NG +AV + RM+ E + D ++ +I A AD+ D
Sbjct: 488 ELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQ 547
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGYSIR HL+ DV V T+L+DMYAK G + +A +F + +++TW A+I G+
Sbjct: 548 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGS 607
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G +EL EM+S G P+ + +S L AC+ G + G+ ++ + D+ L G
Sbjct: 608 HGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEY--FSSMKEDYGLEPG 665
Query: 316 T----SVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMI 370
+++D+ + G A + +M IS + ++ + +H + E A ++
Sbjct: 666 MEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIF 725
Query: 371 ETMVKPDHSTFASLLS 386
E ++P+ + LL+
Sbjct: 726 E--LEPEEGVYHVLLA 739
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 323/556 (58%), Gaps = 3/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+ K ++Y V +I+ Y + A+KLF+EL R V ++NS+I Y +
Sbjct: 277 ICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRG 336
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLN 119
+ ++ +M+ V D +T AC ++ L +G+ + +++ +V +++L+
Sbjct: 337 IEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLD 396
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG +N A+ FE+M K +V W+SMI G V G A+ + MK G+ D
Sbjct: 397 MYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYA 456
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ ACA G+ + G VH Y +L + V +L DMYAK G + A VF +M
Sbjct: 457 VTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK 516
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ ++++W +I G+ +N L L L EMQ +PD ++ L ACA + L G+
Sbjct: 517 KKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-ESKPDGTTVACILPACASLAALDKGRE 575
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHGY +R + + + +V+DMY KCG+ AR+LFD + ++DL+SW V+IA YG+HG+
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G EA++ F QM T ++PD +F S+L A SHSGL++EG F++M + +I+P +HYA
Sbjct: 636 GSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYA 695
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLLAR G + +A K + +M +P +W ALL GC H + EKVA+++ +L P+
Sbjct: 696 CMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPE 755
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L++N +A +KWEEV +RK + + G+KK PG S +E+ G+++ F+ D S Q
Sbjct: 756 NTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQ 815
Query: 539 YEDIVYVLKKLYLEMR 554
+ I +LK+L +M+
Sbjct: 816 AKKIELLLKRLRSKMK 831
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 254/480 (52%), Gaps = 15/480 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ +Y D+ R +F++L + +N +I YS + E + L+ QM++ ++P
Sbjct: 190 KLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKP 249
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+S TF+ LK ++ ++ G ++ +LG+ + V +S+++ Y K+ A F
Sbjct: 250 NSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLF 309
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ +D++ W+SMI+G V NG ++ + +M G+D D M+ + ACA++G
Sbjct: 310 DELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLL 369
Query: 195 FGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H YSI+ L+ +V+ +L+DMY+K G L+ A VF+ M +V+W ++I+G+
Sbjct: 370 LGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGY 429
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+ GL+ ++L EM+S G PD ++ S L ACA G LK GK +H Y + N
Sbjct: 430 VREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNS 489
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++ DMY+KCG A +F M+ +D+ISWN +I Y + EAL+LF +M +
Sbjct: 490 FVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QR 548
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP--TEKHYA--CMVDLLARAG 428
KPD +T A +L A + +++GR + Y ++ +E Y +VD+ + G
Sbjct: 549 ESKPDGTTVACILPACASLAALDKGRE-----IHGYALRNGYSEDKYVTNAVVDMYVKCG 603
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ A + D M L W +++ G H + +I ++ + PD++ +++
Sbjct: 604 LLVLARSLFD-MIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISIL 662
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 204/426 (47%), Gaps = 9/426 (2%)
Query: 37 PLRGVDTYNSIIIAYSRKESPF-EVLGLYNQM----IKEDVRPDSSTFTVALKACVSLMD 91
P +Y + + SRK F EV L N M ++ D + L+ C
Sbjct: 106 PALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKS 165
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
++ G + G D +G ++ +YVKCG + E + F+K+ + W+ MI+
Sbjct: 166 IRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISE 225
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
+G E+++ +K+M + GI + +++ A + G VHG + N
Sbjct: 226 YSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSY 285
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V SL+ Y + A +F ++ ++++W ++ISG+ +NGL +E+ ++M
Sbjct: 286 NTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLV 345
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPS 329
G + D ++V+ +ACA IG L LGK +H Y+++ D + +++DMYSKCG +
Sbjct: 346 FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLN 405
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F++M + ++SW +I Y G + A+ LF +M V PD S+L+A +
Sbjct: 406 SAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACA 465
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
+G ++ G+ D + + ++ + D+ A+ G +++A + M + ++ W
Sbjct: 466 INGNLKSGKIVHDY-IRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS-W 523
Query: 450 VALLSG 455
++ G
Sbjct: 524 NTMIGG 529
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/553 (36%), Positives = 309/553 (55%), Gaps = 13/553 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N+ A KLF+E+P + V +N++I Y + E L + M + PD
Sbjct: 147 LVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPD 206
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T T A+ +C L+DL G EI ++ V G+ D FV ++++++Y KCG++ A+ FE
Sbjct: 207 SVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFE 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K +V W+SMING F G + +KRM EG+ + + AC+
Sbjct: 267 QMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLE 326
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHGY IR + D+ + +SL+D+Y K G ++ A +FK M + V+W +ISG+
Sbjct: 327 GKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVT 386
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G L L EM EPD+++ S L AC+Q+ L+ G+ IH V R N V+
Sbjct: 387 EGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVV 446
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY+KCG A +F + RDL+SW +I +YG HG EAL LF +M+++ V
Sbjct: 447 MGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNV 506
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF ++LSA SH+GLV++G Y F+ M++ Y I P +HY+C++ LL RAG + EA
Sbjct: 507 KPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAY 566
Query: 435 KIVDS-MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+I+ S + L S C HK +G ++A+ ++ +PDD + ++SN +A
Sbjct: 567 EILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASF 626
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW+EV VR M+ G+KK PG S +E+N ++ F +ED SH E I +L
Sbjct: 627 GKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNIL------- 679
Query: 554 RAISSWLQGHMEE 566
S+L HME+
Sbjct: 680 ----SYLTSHMED 688
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 256/478 (53%), Gaps = 9/478 (1%)
Query: 16 IIALYGGKNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ-MIKEDV 72
+I+LY N A+ +F+ E P + N ++ Y+R E LGL+++ M +
Sbjct: 44 LISLYVSCNLFDYAKNVFDVIENPFE-ISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCL 102
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PDS T+ LKAC L + +G+ I V+ G D+ VGSS++ +Y KC + A+
Sbjct: 103 KPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVK 162
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M KD+ CW+++I+ +G+ EA+ + M++ G + D V + I +CA L D
Sbjct: 163 LFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLD 222
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + +D V +LVDMY K G L++A VF+ M +V W ++I+G
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMING 282
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
+ G S ++L M S G +P +L S L+AC+Q L GK +HGY +R R +
Sbjct: 283 YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPD 342
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ L +S++D+Y KCG A +F M +SWNV+I+ Y G +AL LF +M +
Sbjct: 343 IFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSK 402
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V+PD TF S+L+A S +E+GR +L+V + + E ++D+ A+ G VE
Sbjct: 403 SFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER-NLGNNEVVMGALLDMYAKCGAVE 461
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
EA + + E L W ++++ +H + ++ ++L+ N PD + A++S
Sbjct: 462 EAFGVFKCLP-ERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILS 518
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 194/384 (50%), Gaps = 5/384 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ L+A V+ LK G+ + +K V LG NDV+V ++++LYV C + A F
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAY-KRMKKEGIDADEVVMMGLIQACADLGD 192
+ ++ ++ + ++ G N EA+ + K M + D +++AC L
Sbjct: 62 DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR 121
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H ++ L +D+ V +SLV MYAK + A +F M ++ W +IS
Sbjct: 122 VVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISC 181
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ Q+G L M+ GFEPDSV++ +A+ +CA++ L G+ IH V F +
Sbjct: 182 YYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMD 241
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +++DMY KCG A +F+QM ++ +++WN +I YG G G + LF +M
Sbjct: 242 SFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYS 301
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKP +T S L A S S + EG++ ++ + +IQP + ++DL + G+VE
Sbjct: 302 EGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYII-RNRIQPDIFLNSSLMDLYFKCGKVE 360
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A I M ++ W ++SG
Sbjct: 361 SAETIFKLMPKTTTVS-WNVMISG 383
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ NL +G ++ +Y + A +F+ LP R + ++ S+I AY +E
Sbjct: 435 IVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEA 494
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKAC 86
L L+ +M++ +V+PD TF L AC
Sbjct: 495 LELFAEMLQSNVKPDRVTFLAILSAC 520
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 311/533 (58%), Gaps = 7/533 (1%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF+ L + +N+I+ ++S P VL Y+++ V PD TF + LKA L +
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+ + + V+ G D FV +S+++ + CG ++ + F + +KD+V W+++ING
Sbjct: 120 -ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNL 210
+ NG+ EA++ + M+ G++ DEV ++ ++ A A L D FG VHG+ + +
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
DV V ++LVDMY+K G+ D A VF M N+V+WGALI+G+ Q L++ EM
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
G EP+ ++ SAL ACAQ+G L G+ +H Y R + N LGT+++DMYSKCG
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F+++ ++D+ W +I + G +L+LF QMI + V+P+ TF +LSA +
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H GLV+EG F LM+ Y+++P HY CMVDLL RAG +EEA+K ++SM EP VW
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
AL SGC HK F +GE + ++KL P G + L++N ++ QKWE A VR+ M+
Sbjct: 479 GALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGK 538
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSH----NQYEDIVYVLKKLYLEMRAISS 558
G+ K P S +EVNG +H FI DKSH N Y + V +L L A+ S
Sbjct: 539 GVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATYALDS 591
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 193/352 (54%), Gaps = 7/352 (1%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G + F S +L K + ++ F+++ + W++++ + QP+ + AY
Sbjct: 35 GLAHHTFFLSDLLRSATK--DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAY 92
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
R++ G+ D L++A + L + + + ++ L+ D VQ SLV +A
Sbjct: 93 SRLRNHGVIPDRHTFPLLLKAFSKLRNEN-PFQFYAHIVKFGLDFDAFVQNSLVSAFAHC 151
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G++D + +F ++ ++V+W ALI+G +NG A LE +EM+S G E D V++VS L
Sbjct: 152 GYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVL 211
Query: 286 LACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
A A + + G+ +HG+ V R +++ +G++++DMYSKCG A +F++M +R+L
Sbjct: 212 CAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNL 271
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SW +IA Y +EAL +F +MI ++P+ ST S L+A + G +++GR W
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGR-WLHE 330
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
V + K+ K +VD+ ++ G V+EAL + + + + + W A+++G
Sbjct: 331 YVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK-DVYPWTAMING 381
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K+F E+P R + ++ ++I Y + E L ++ +MI E + P+ ST T AL AC
Sbjct: 259 AVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQ 318
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L G + G + +G++++++Y KCG ++EA++ FEK+ KD+ W++M
Sbjct: 319 LGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAM 378
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DLGDSRFGLSVHGYS 203
INGL G +++ + +M + + + V +G++ ACA D G F L + Y
Sbjct: 379 INGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDY- 437
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
L +V +VD+ + G L+ A ++M WGAL SG
Sbjct: 438 ---RLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +FE+LP + V + ++I + + L L++QMI+ V+P+
Sbjct: 347 LVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPN 406
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TF L AC + G E++R + + +V M++L + G++ EA+
Sbjct: 407 GVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFI 466
Query: 135 EKMQRKDLV-CWSSMING 151
E M + W ++ +G
Sbjct: 467 ESMPMEPTPGVWGALFSG 484
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 317/561 (56%), Gaps = 15/561 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N A LF E+P + V +N++I Y + + E L + M + P+
Sbjct: 147 LVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPN 206
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T T A+ +C L+DL G EI + + G+ D F+ S+++++Y KCG + A+ FE
Sbjct: 207 SVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFE 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +K +V W+SMI+G G + +KRM EG+ + LI C+
Sbjct: 267 QMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLE 326
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHGY+IR + DV + +SL+D+Y K G ++LA ++FK + + +V+W +ISG+
Sbjct: 327 GKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVA 386
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVL 314
G L L EM+ EPD+++ S L AC+Q+ L+ G+ IH + ++ D N V+
Sbjct: 387 EGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVV 446
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY+KCG A ++F + RDL+SW +I +YG HG AL LF +M+++ +
Sbjct: 447 MGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNM 506
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF ++LSA H+GLV+EG Y+F+ MV+ Y I P +HY+C++DLL RAG + EA
Sbjct: 507 KPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAY 566
Query: 435 KIV-DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+I+ + + + L S C H+ +G ++A+ ++ +PDD + L+SN +A
Sbjct: 567 EILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASA 626
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW+EV VR M++ G+KK PG S +E+N ++ F +ED SH E + L
Sbjct: 627 HKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCL------- 679
Query: 554 RAISSWLQGHMEEHEEHDPLS 574
S+L HME +E P +
Sbjct: 680 ----SYLSDHME--DESKPFT 694
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 248/451 (54%), Gaps = 6/451 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIW 99
+ +N ++ Y++ E L L+ +++ ++PDS T+ LKAC L +G+ I
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
V+ G D+ VGSS++ +Y KC +A+ F +M KD+ CW+++I+ +G +
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
EA++ + M++ G + + V + I +CA L D G+ +H I LD + ++LV
Sbjct: 190 EALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMY K GHL++A VF+ M + +V W ++ISG+ G + S ++L M + G +P
Sbjct: 250 DMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLT 309
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L S ++ C++ L GK +HGYT+R R ++ + +S++D+Y KCG A +F +
Sbjct: 310 TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLI 369
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
++SWNV+I+ Y G EAL LF +M ++ V+PD TF S+L+A S +E+G
Sbjct: 370 PKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGE 429
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
+L++ K K+ E ++D+ A+ G V+EA + + L W ++++ +
Sbjct: 430 EIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSMITAYGS 487
Query: 459 HKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
H + + ++ ++L+ N PD + A++S
Sbjct: 488 HGQAYVALELFAEMLQSNMKPDRVTFLAILS 518
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 198/384 (51%), Gaps = 5/384 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ L+AC++ LK G+ I +K V LG ND+F+ +++NLY+ C + A F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGD 192
+ M+ ++ W+ ++ G N EA++ +++ + + D +++AC L
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H ++ L +D+ V +SLV MYAK + A +F M ++ W +IS
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ Q+G LE M+ GFEP+SV++ +A+ +CA++ L G IH + F +
Sbjct: 182 YYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY KCG A +F+QM + +++WN +I+ YG+ G + LF +M
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYN 301
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKP +T +SL+ S S + EG++ + + +IQ + ++DL + G+VE
Sbjct: 302 EGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTI-RNRIQSDVFINSSLMDLYFKCGKVE 360
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A I + + + W ++SG
Sbjct: 361 LAENIF-KLIPKSKVVSWNVMISG 383
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/534 (36%), Positives = 309/534 (57%), Gaps = 2/534 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
G + SARKLF+EL R V ++NS+I Y + L L+ QM+ + D +T
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVS 256
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
+ C + L +G + A++ +G ++ + + +L++Y K G +N A+ FE M +
Sbjct: 257 VVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS 316
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+SMI G G +V + M+KEGI D + ++ ACA G G VH
Sbjct: 317 VVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHN 376
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
Y + D+ V +L+DMYAK G + A VF M +IV+W +I G+++N L
Sbjct: 377 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNE 436
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
L L +EMQ +P+S+++ L ACA + L+ G+ IHG+ +R F + + +++D
Sbjct: 437 ALNLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 495
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY KCG AR LFD + +DL+SW V+IA YG+HG+G EA++ F +M + ++PD +
Sbjct: 496 MYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVS 555
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
F S+L A SHSGL++EG +F++M + I+P +HYAC+VDLLARAG + +A K + M
Sbjct: 556 FISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMM 615
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
EP +W ALL GC + + EKVA+ V +L P++ G + L++N +A +KWEEV
Sbjct: 616 PIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVK 675
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+R+ + + G++K PG S +E+ G++H F+ D SH I +LKK M+
Sbjct: 676 KLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMK 729
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 232/480 (48%), Gaps = 71/480 (14%)
Query: 36 LPLRGVDT----YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LP +D YN I + + + L NQ K D+ + T+ L+ C L
Sbjct: 59 LPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKS 116
Query: 92 LKMGEEIWRKAVELGYGNDVFV----GSSMLNLYVKCGKMNEAMVAFEKMQR-------- 139
++ G R+ + NDV V GS ++ +YV CG + E F+K+
Sbjct: 117 IQDG----RRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNL 172
Query: 140 -----------------------------------------KDLVCWSSMINGLVFNGQP 158
+D++ W+SMI+G V NG
Sbjct: 173 LMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLS 232
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
+ +D +++M GI+ D M+ ++ C++ G G ++HGY+I+ ++ + L
Sbjct: 233 EKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCL 292
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+DMY+K+G+L+ A VF+ M ++V+W ++I+G+A+ GL+ ++ L EM+ G PD
Sbjct: 293 LDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDI 352
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
++ + L ACA G L+ GK +H Y + +L + +++DMY+KCG A ++F +
Sbjct: 353 FTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSE 412
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
MQ +D++SWN +I Y + EAL+LF++M + KP+ T A +L A + +E G
Sbjct: 413 MQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERG 471
Query: 398 RYWF-DLMVSKYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++ + + + ++H A +VD+ + G + A + D M E L W +++G
Sbjct: 472 QEIHGHILRNGFSL---DRHVANALVDMYLKCGALGLARLLFD-MIPEKDLVSWTVMIAG 527
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 323/577 (55%), Gaps = 35/577 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
MI T L G + R+I+ ++ K+ L V ++N++I E+P
Sbjct: 76 MILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQ 135
Query: 59 EVLGLYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ L LY +M+ + RPD+ T++ K C +L+ MG EI + +++G+ D+++ + +
Sbjct: 136 KGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGI 195
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++ V G+ A F++ +DLV W+S+ING V QPREA+ Y++M E + DE
Sbjct: 196 IHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDE 255
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V M+G++ ACA L + G +H Y LNL + + +L+DMY K G L+ +F N
Sbjct: 256 VTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDN 315
Query: 238 MSRINIVTWGALISGFAQNGL---AGS----------------------------TLELL 266
M + +V+W +I G+A+NGL AG LEL
Sbjct: 316 MRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELF 375
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EMQ +PD V+++ L AC+Q+G L G H Y + ++ LGT++IDMY+KC
Sbjct: 376 REMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKC 435
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + A +F++M R+ ++W II ++G+ +A+ F +MI++ + PD TF +L
Sbjct: 436 GNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVL 495
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+A H GLVEEGR +FD M S++ + P KHY+CMV+LL RAG +EEA +++ +M E
Sbjct: 496 TACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEAD 555
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
VW AL C H+ IGE+ A K+L L+P D GI+ L++N + KWEE +RK
Sbjct: 556 AMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKM 615
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
M + G++K PG S +EVNG ++ FI+ DKSH Q E I
Sbjct: 616 MMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQI 652
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/516 (38%), Positives = 305/516 (59%), Gaps = 7/516 (1%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N++I + E + +Y+ M KE + PDS TF LKAC ++D ++G ++ V
Sbjct: 76 FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV 135
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ G D FV S++NLY KCG ++ A F+ + K+ W++ I+G V G+ REA+D
Sbjct: 136 KAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAID 195
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
++R+ + G+ D ++ ++ AC GD R G + Y + +V V T+LVD Y
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG 255
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G+++ A VF M NIV+W ++I G+A NGL L+L +M + G +PD ++V
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315
Query: 284 ALLACAQIGFLKLG----KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
L +CA++G L+LG I+G F N VLGT++IDMY+KCG A +F M+
Sbjct: 316 VLCSCARLGALELGDWASNLING---NEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR 372
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+D + WN I+ + GH ++AL LF QM ++ +KPD +TF LL A +H+GLVEEGR
Sbjct: 373 KKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR 432
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+F+ M + + P +HY CMVDLL RAG ++EA +++ SM E VW ALL GC H
Sbjct: 433 YFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
+ + E V KK++ L P G + L+SN +A KWEE A +R M + G+KK+PGYS
Sbjct: 493 RDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSW 552
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+EV+G +H F++ D SH E I L +L +++A
Sbjct: 553 IEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKA 588
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 186/365 (50%), Gaps = 3/365 (0%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
LK + I + LG D ++ + +L G N + ++ + ++ +++MI G
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
LV N +E+++ Y M+KEG+ D +++ACA + DS G+ +H ++ D
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V+ SL+++Y K G +D A VF ++ N +W A ISG+ G +++ +
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSC 330
G PDS SLV L AC + G L+ G+ I Y T N+ + T+++D Y KCG
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMER 262
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR++FD M ++++SW+ +I Y +G +EAL LF +M+ +KPD +L + +
Sbjct: 263 ARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCAR 322
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G +E G W +++ + ++D+ A+ G ++ A ++ M + + VW
Sbjct: 323 LGALELGD-WASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRV-VWN 380
Query: 451 ALLSG 455
A +SG
Sbjct: 381 AAISG 385
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 185/382 (48%), Gaps = 10/382 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I +A K+F+++P + ++ + I Y E + ++ ++++ +RPD
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + L AC DL+ GE I E G +VFV +++++ Y KCG M A F+
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M K++V WSSMI G NG P+EA+D + +M EG+ D M+G++ +CA LG
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 196 GLSVHGYSIRRHLNLDVKV-QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G I + LD V T+L+DMYAK G +D A VF+ M + + V W A ISG A
Sbjct: 329 GDWASNL-INGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G L L +M+ G +PD + V L AC G ++ G+ F +
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447
Query: 315 G--TSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ + G A L M + I W ++ +H + + ++I
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507
Query: 372 TMVKPDHSTFASLLS---ALSH 390
++P HS LLS A SH
Sbjct: 508 --LEPWHSGNYVLLSNIYAASH 527
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/540 (36%), Positives = 306/540 (56%), Gaps = 34/540 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N +I +Y+++ P L +Y Q+ K D D+ LKAC + ++G+EI +
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ G DVFVG++++ +Y +C + A + F+KM +D+V WS+MI L N + A++
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN--LDVKVQTSLVDM 221
+ M + EV M+ ++ AD + R G ++H Y IR N + V T+L+DM
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISG----------------------------- 252
YAK GHL LA +F +++ +V+W A+I+G
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331
Query: 253 --FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
+AQ L +M++ G P V++VS L CA G L LGK +H Y + R +
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ +L T+++DMY+KCG + A LF + SRD+ WN II + +HG+GEEAL +F +M
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
VKP+ TF LL A SH+GLV EG+ F+ MV + + P +HY CMVDLL RAG
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA +++ SM +P VW AL++ C HK +GE A ++L++ P++ G + L+SN
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 571
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +W + AGVRKTM+ GMKK PG+SV+EVNG +H F+M D+SH Q I +L ++
Sbjct: 572 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 631
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 188/411 (45%), Gaps = 42/411 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + AR +F+++ R V +++++I + SR + L L +M VRP
Sbjct: 165 LMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPS 224
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG----SSMLNLYVKCGKMNEAM 131
+ +++MG+ + A + N+ +G +++L++Y KCG + A
Sbjct: 225 EVAMVSMVNLFADTANMRMGKAM--HAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 282
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREA------------------------------ 161
F + +K +V W++MI G + + + EA
Sbjct: 283 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 342
Query: 162 -VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
+ + +M+ G+ +V ++ L+ CA G G VH Y + + +D + T+LVD
Sbjct: 343 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVD 402
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MYAK G ++ A +F +I W A+I+GFA +G L++ EM+ G +P+ ++
Sbjct: 403 MYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDIT 462
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ L AC+ G + GK + V F + ++D+ + G+ A + M
Sbjct: 463 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM 522
Query: 339 QSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ + I W ++A+ +H + + Q++E ++P++ + L+S +
Sbjct: 523 PIKPNTIVWGALVAACRLHKNPQLGELAATQLLE--IEPENCGYNVLMSNI 571
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 318/568 (55%), Gaps = 13/568 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT L ++ +YG N A LF E+P + V +N++I Y + + +
Sbjct: 132 LIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDA 191
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + M + P+S T T A+ +C L+DL G EI + + G+ D F+ S+++++
Sbjct: 192 LEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDM 251
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A+ FE+M +K +V W+SMI+G G + +KRM EG+ +
Sbjct: 252 YGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTL 311
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
LI C+ G VHGY+IR + DV V +SL+D+Y K G ++LA +FK + +
Sbjct: 312 SSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPK 371
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+V+W +ISG+ G L L EM+ E D+++ S L AC+Q+ L+ GK I
Sbjct: 372 SKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEI 431
Query: 301 HGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + ++ D N V+ +++DMY+KCG A ++F + RDL+SW +I +YG HGH
Sbjct: 432 HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHA 491
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
AL LF +M+++ VKPD F ++LSA H+GLV+EG Y+F+ M++ Y I P +HY+C
Sbjct: 492 YGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSC 551
Query: 420 MVDLLARAGEVEEALKIV-DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
++DLL RAG + EA +I+ + + + L S C H+ +G ++A+ ++ +PD
Sbjct: 552 LIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPD 611
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
D + L+SN +A KW+EV VR M++ G+KK PG S +E+N ++ F +ED SH
Sbjct: 612 DSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLH 671
Query: 539 YEDIVYVLKKLYLEMRAISSWLQGHMEE 566
E + L S+L HME+
Sbjct: 672 LELVFKCL-----------SYLSDHMED 688
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 247/453 (54%), Gaps = 10/453 (2%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIW 99
+ +N ++ Y++ E L L+ +++ ++PDS T+ KAC L +G+ I
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIH 129
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
++ G D+ VGSS++ +Y KC +A+ F +M KD+ CW+++I+ +G +
Sbjct: 130 TCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+A++ + M++ G + + V + I +CA L D G+ +H I LD + ++LV
Sbjct: 190 DALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMY K GHL++A +F+ M + +V W ++ISG+ G S ++L M + G +P
Sbjct: 250 DMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLT 309
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L S ++ C++ L GK +HGYT+R R ++ + +S++D+Y KCG A +F +
Sbjct: 310 TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLI 369
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
++SWNV+I+ Y G EAL LF +M ++ V+ D TF S+L+A S +E+G+
Sbjct: 370 PKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGK 429
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GC 456
+L++ K K+ E ++D+ A+ G V+EA + + L W ++++ G
Sbjct: 430 EIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSMITAYGS 487
Query: 457 HNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
H H ++ ++ ++L+ N PD + A++S
Sbjct: 488 HGHAYGAL--ELFAEMLQSNVKPDRVAFLAILS 518
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 197/384 (51%), Gaps = 5/384 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ L+AC++ LK G+ I +K V LG ND+F+ +++N Y+ C + A F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGD 192
+ M+ ++ W+ ++ G N EA++ +++ + + D + +AC L
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H I+ L +D+ V +SLV MY K + A +F M ++ W +IS
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ Q+G LE M+ GFEP+SV++ +A+ +CA++ L G IH + F +
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY KCG A +F+QM + +++WN +I+ YG+ G + LF +M
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYN 301
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKP +T +SL+ S S + EG++ + + +IQP + ++DL + G+VE
Sbjct: 302 EGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTI-RNRIQPDVFVNSSLMDLYFKCGKVE 360
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A KI + + + W ++SG
Sbjct: 361 LAEKIF-KLIPKSKVVSWNVMISG 383
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/587 (33%), Positives = 331/587 (56%), Gaps = 45/587 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R++ +Y + AR++F+++ R V ++ +I+ Y E + L+ M+ E VRP
Sbjct: 50 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 109
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D F KAC L + ++G++++ + +G+ + V S+L++++KCG+M+ A F
Sbjct: 110 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 169
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+++ KD+ W+ M++G G+ ++A++ +++M EG+ + + + + AC +L R
Sbjct: 170 EEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLR 229
Query: 195 FGLSVHGYSIR-RHLNLDVKVQTSLVDMYAK----------------------------T 225
G +HGY I+ L+ D+ V SLVD YAK T
Sbjct: 230 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVT 289
Query: 226 G---------------HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
G + +A VF +S ++V W ++IS AQ+G + + L+LL EM
Sbjct: 290 GFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
E ++V++VSAL AC+++ L+ GK IH + +R D + S+IDMY +CG
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 409
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+R +FD M RDL+SWNV+I+ YG+HG G +A++LF Q +KP+H TF +LLSA S
Sbjct: 410 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
HSGL+EEG +F +M ++Y + P + YACMVDLL+RAG+ E L+ ++ M EP AVW
Sbjct: 470 HSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
+LL C H + E A+ + +L P G + L++N ++ +WE+ A +R M++
Sbjct: 530 GSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
G+ K PG S +EV +LH+F++ D SH E I ++ LY +++ I
Sbjct: 590 GVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEI 636
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 173/331 (52%), Gaps = 12/331 (3%)
Query: 74 PDSST--FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD + L+ C L +L++G ++ + V G F+GS +L +Y + G + +A
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+KM +++ W++++ G E + + M EG+ D V + +AC++L
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ R G V+ Y + + V+ S++DM+ K G +D+A F+ + ++ W ++S
Sbjct: 126 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 185
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFD 309
G+ G L + +M G +P+S+++ SA+ AC + L+ G+ IHGY ++ D
Sbjct: 186 GYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 245
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI--HGHGEEALSLFL 367
+L++G S++D Y+KC AR F ++ DL+SWN ++A G +G G+ AL F
Sbjct: 246 SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQ 305
Query: 368 QM-IETMVKPDHST-----FASLLSALSHSG 392
+M I V + ST + S++SA + SG
Sbjct: 306 RMHIACSVFSELSTRDVVVWNSIISACAQSG 336
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 174 DADEVVMM--GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
+ DE + + ++Q C L + R G VH + +++ + + L+++Y +TG ++ A
Sbjct: 5 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 64
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
+F MS N+ +W A++ + G T++L M + G PD AC+++
Sbjct: 65 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 124
Query: 292 GFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
++GK ++ Y + F+ N + S++DM+ KCG AR F++++ +D+ WN+++
Sbjct: 125 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 184
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ Y G ++AL++F +M+ VKP+ T AS +SA ++ L+ GR + ++
Sbjct: 185 SGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 244
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+VD A+ VE A + M + L W A+L+
Sbjct: 245 DSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLA 287
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 283 SALLACAQIGFLKLGKSIHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S L C ++ L+LG +H V D LG+ ++++Y + G AR +FD+M R
Sbjct: 15 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
++ SW I+ Y G EE + LF M+ V+PDH F + A S G+ +
Sbjct: 75 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 134
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
D M+S + ++D+ + G ++ A + + + + + +W ++SG + +
Sbjct: 135 DYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD-VFMWNIMVSGYTSKGE 192
Query: 462 FSIGEKVAKKVL--KLNPDDLGIHALVS 487
F V +K++ + P+ + I + VS
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVS 220
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L + +I +YG I +R++F+ +P R + ++N +I Y +
Sbjct: 383 IIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDA 442
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
+ L+ Q ++P+ TFT L AC + EE W+ K ++ Y D V +
Sbjct: 443 VNLFQQFRTMGLKPNHITFTNLLSACSH---SGLIEEGWKYFKMMKTEYAMDPAVEQYAC 499
Query: 117 MLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQP 158
M++L + G+ NE + EKM + W S++ + P
Sbjct: 500 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP 542
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 312/528 (59%), Gaps = 4/528 (0%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ ARKLF ++ N++I Y+R ++P+E + LY M++ V D+ T+ L
Sbjct: 60 DLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLA 119
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC L +K+G + ++ G+G+D+FV ++++ Y CG A F++ +D+V
Sbjct: 120 ACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVT 179
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W+ MIN + G +A D M K + + DEV M+ L+ ACA LG+ G +H YS
Sbjct: 180 WNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYS 239
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
L+ +++V +++DMY K ++ A VF + ++++W +++SG A++G L
Sbjct: 240 KELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEAL 299
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDM 321
L +MQ E D ++LV L ACAQ G L GK IH + +F+ N LVL T+++DM
Sbjct: 300 ALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIH-LLIDKFEINCDLVLETALVDM 358
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG A +F +M+ R++ +WN +I +HGHGE+A+SLF QM + PD TF
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+LL A SH+GLV+EG F M +K++I+P +HY C+VDLL RA +V++AL +++M
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
+ +W LL C + F + EK+ ++V++L PD G + ++SN +A +W+
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 538
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+RK M+ G++K PG S +E+NG +H F+ D+SH Q E I +++++
Sbjct: 539 LRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEM 586
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 6/366 (1%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G +N A F +MQ D ++MI G + P EAV Y M + G+ D ++
Sbjct: 59 GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
ACA LG + G H ++ D+ V +L+ Y G A VF + ++V
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
TW +I+ GL+ +LL EM PD V++VS + ACAQ+G L+ GK +H Y
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSY 238
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ D NL + +++DMY KC A+ +F++++ +D++SW +++ G+ +EA
Sbjct: 239 SKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEA 298
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L+LF +M ++ D T +LSA + +G +++G+Y L++ K++I +VD
Sbjct: 299 LALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY-IHLLIDKFEINCDLVLETALVD 357
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDL 480
+ A+ G ++ AL++ M + W AL+ G H H + +I + KL PDD+
Sbjct: 358 MYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 416
Query: 481 GIHALV 486
AL+
Sbjct: 417 TFIALL 422
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 197/380 (51%), Gaps = 6/380 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
+ +I Y A +F+E +R V T+N +I A+ K + L ++M K ++
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+RPD T + AC L +L+ G+ + + ELG ++ V +++L++Y KC + A
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQ 268
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F +++ KD++ W+SM++GL +G +EA+ +++M+ I+ DE+ ++G++ ACA G
Sbjct: 269 EVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTG 328
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H + +N D+ ++T+LVDMYAK G +DLA VF+ M N+ TW ALI
Sbjct: 329 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIG 388
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G A +G + L +M+ PD V+ ++ L AC+ G + G ++ +F
Sbjct: 389 GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 448
Query: 312 LVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQ 368
+ V+D+ + A A + M + + + W ++ + GH + A + +
Sbjct: 449 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRR 508
Query: 369 MIETMVKPDHSTFASLLSAL 388
+IE ++PD +LS L
Sbjct: 509 VIE--LEPDSCGRYVMLSNL 526
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYA--KTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
H +R HL + + L+ A +G L+ A +F M + +I G+A++
Sbjct: 31 HALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQ 90
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
+ L M G D+ + L ACA++G +KLG+ H ++ F +L +
Sbjct: 91 NPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVIN 150
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVK 375
++I Y CG CA +FD+ RD+++WN++I ++ G E+A L +M + ++
Sbjct: 151 ALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLR 210
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD T SL+ A + G +E G++ + + + ++D+ + ++E A +
Sbjct: 211 PDEVTMVSLVPACAQLGNLERGKFLHS-YSKELGLDENLRVNNAILDMYCKCDDIESAQE 269
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+ + + + L+ W ++LSG
Sbjct: 270 VFNRIREKDVLS-WTSMLSG 288
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 328/594 (55%), Gaps = 39/594 (6%)
Query: 1 MIKTNL--SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M++TN Y S A + + + ARK+F+++P + ++N +I A + P
Sbjct: 162 MLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPI 221
Query: 59 EVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ + ++ +M+ + P+ TF V +KA +G+ + A++ +G+DVFV +S+
Sbjct: 222 QSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSL 281
Query: 118 LNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
++ Y CG ++ A + FE ++ KD+V W+SM+ G V G P +A+D ++RM+ EG+
Sbjct: 282 IHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHP 341
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ V M+ ++ ACA + G V Y R + +++ V + +DM+ K G +++A +F
Sbjct: 342 NAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLF 401
Query: 236 KNMSRINIVTW-------------------------------GALISGFAQNGLAGSTLE 264
NM + ++V+W LISG+ Q+G L
Sbjct: 402 DNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALA 461
Query: 265 LLMEMQ--SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDM 321
+ E+Q G PD V+L+S L ACAQ+G + +G+ IHGY + R N L TS+IDM
Sbjct: 462 IFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDM 521
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSK G A +F + ++D+ W+ +IA +HG GE A+ LFL M ET VKP+ TF
Sbjct: 522 YSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTF 581
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+LL A SHSGLV+EG+ FD M Y + P KHY+CMVD+L RAG +EEALK ++ M
Sbjct: 582 TNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMP 641
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
P +VW ALL C H + EK ++L++ P + G + L+SN +A WE V+
Sbjct: 642 LAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSE 701
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+R+ MR SG+KK G S +E++G +H FI+ D +H DI L ++ +R+
Sbjct: 702 LRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRS 755
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 320/576 (55%), Gaps = 37/576 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y +I A ++F ++ R V ++ +II A ++ E LY QM++ + P+
Sbjct: 198 LITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPN 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF L +C + L G I E G D+ V ++++ +Y KC + EA F+
Sbjct: 258 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFD 317
Query: 136 KMQRKDLVCWSSMINGLVFNG-QPREAVDA----YKRMKKEGIDADEVVMMGLIQACADL 190
+M ++D++ WS+MI G +G + +E++D +RM++EG+ ++V M +++AC
Sbjct: 318 RMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAH 377
Query: 191 GDSRFGLSVH------GYSIRRHL-------------------------NLDVKVQTSLV 219
G G +H G+ + R L N +V TS +
Sbjct: 378 GALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFL 437
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
MY K G L A VF M N+V+W +I+G+AQNG ELL M++ GF+PD V
Sbjct: 438 SMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRV 497
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
++++ L AC + L+ GK +H V+ + + V+ TS+I MYSKCG + AR +FD+M
Sbjct: 498 TVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKM 557
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+RD ++WN ++A YG HG G EA+ LF +M++ V P+ T +++SA S +GLV+EGR
Sbjct: 558 SNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGR 617
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
F +M +K+ P ++HY CMVDLL RAG ++EA + + SM EP ++VW ALL C +
Sbjct: 618 EIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKS 677
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
H + E+ A +L+L P ++ +SN +A +W++ VR+ M G+KK G S
Sbjct: 678 HNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGES 737
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+E++G +H F+ ED +H + + I L+ L EM+
Sbjct: 738 SIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMK 773
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 252/517 (48%), Gaps = 44/517 (8%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS +I Y D+ SA ++F + LR V T++S+I AY+ P + + +M
Sbjct: 94 GNS---LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
++ P+ TF LKAC + L+ G +I +G DV V ++++ +Y KCG+++
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISV 210
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F KM +++V W+++I + + EA + Y++M + GI + V + L+ +C
Sbjct: 211 ACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G +H + R L D+ V +L+ MY K + A +F MS+ ++++W A+
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330
Query: 250 ISGFAQNGLA-----GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH--- 301
I+G+AQ+G +LL M+ G P+ V+ +S L AC G L+ G+ IH
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 302 ---GYTVRR------FDF--------------------NLVLGTSVIDMYSKCGVPSCAR 332
G+ + R F+ N+V TS + MY KCG S A
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAE 450
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+F +M +R+++SWN++IA Y +G + L M +PD T ++L A
Sbjct: 451 KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALA 510
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E G+ V K ++ ++ + ++ G+V EA + D MS +A W A+
Sbjct: 511 GLERGKLVHAEAV-KLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNAM 568
Query: 453 LSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
L+G H + K++LK ++P+++ + A++S
Sbjct: 569 LAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVIS 605
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 212/422 (50%), Gaps = 11/422 (2%)
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF 112
R ++LG+ Q + +S+T+ ++ C + G+ + ++ ELG D++
Sbjct: 36 RLREAIQLLGIIKQ---RGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+S++N Y K + A F +M +D+V WSSMI N P +A D ++RM
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
I+ + + + +++AC + G +H + DV V T+L+ MY+K G + +A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF M+ N+V+W A+I AQ+ EL +M G P++V+ VS L +C
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L G+ IH + R + ++++ ++I MY KC AR +FD+M RD+ISW+ +IA
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 352 SYGIHGHGE-EALSLFLQMIETM----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
Y G+ + E++ Q++E M V P+ TF S+L A + G +E+GR +S
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQ-IHAELS 391
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
K + + ++ A+ G + EA ++ M+ + +A W + LS S E
Sbjct: 392 KVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVA-WTSFLSMYIKCGDLSSAE 450
Query: 467 KV 468
KV
Sbjct: 451 KV 452
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 3/301 (0%)
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G+ REA+ +K+ G+ + +I+ CA G VH + +D+ +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
SL++ Y+K + A VF+ M+ ++VTW ++I+ +A N + M E
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ ++ +S L AC L+ G+ IH + ++ + T++I MYSKCG S A +
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F +M R+++SW II + H EA L+ QM++ + P+ TF SLL++ + +
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
GR +S+ ++ ++ + + V+EA +I D MS ++ W A+++
Sbjct: 275 NRGRR-IHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS-WSAMIA 332
Query: 455 G 455
G
Sbjct: 333 G 333
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 330/601 (54%), Gaps = 40/601 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-PDSSTFTVALKACV 87
A K+F+++P + T+N++I A++ P + L ++ QM+ E R P+S TF +KA
Sbjct: 83 ACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L G+ I ++ +G+D+F+ +S+++ Y G ++ A + F K+ KD+V W+S
Sbjct: 143 EVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNS 202
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI+G V G P EA+ +KRMK E + V M+G++ ACA D FG Y R
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262
Query: 208 LNL-------------------------------DVKVQTSLVDMYAKTGHLDLASHVFK 236
+++ D+ T+++D YAK G D A VF
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLK 295
M R +I W ALIS + QNG L + E+Q + +P+ V+L S L ACAQ+G +
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMD 382
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
LG IH Y ++ N + TS+IDMYSKCG A +F ++ RD+ W+ +IA
Sbjct: 383 LGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLA 442
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HGHG A+ LF +M ET VKP+ TF +LL A SHSGLV+EGR +F+ M Y + P
Sbjct: 443 MHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGS 502
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
KHYACMVD+L RAG +EEA+++++ M P +VW ALL C + + E ++L+
Sbjct: 503 KHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLE 562
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+ ++ G + L+SN +A KW+ V+ +R+ M+ SG++K PG S +EVNG +H F++ D
Sbjct: 563 TDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDN 622
Query: 535 SHNQYEDIVYVLKKLYLEMRAI------SSWLQGHMEEHEEHDPLSTAAQYAPTYYLKIR 588
SH +I L ++ +++ S LQ EE+ + L+ ++ Y IR
Sbjct: 623 SHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIR 682
Query: 589 L 589
+
Sbjct: 683 M 683
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 203/398 (51%), Gaps = 47/398 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y D+ SA +F ++ + + ++NS+I + + SP E L L+ +M E+ RP+
Sbjct: 172 LIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPN 231
Query: 76 SSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
T L AC +DL+ G + I R +++ ++ + ++ML++YVKCG + +A
Sbjct: 232 RVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI----NLILSNAMLDMYVKCGSLEDAR 287
Query: 132 VAFEKMQRKDLVCWSSMINGL-----------VF--------------------NGQPRE 160
F+KM+ KD+V W++MI+G VF NG+P+E
Sbjct: 288 RLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKE 347
Query: 161 AVDAYKRMK-KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
A+ ++ ++ + +EV + + ACA LG G +H Y ++ + L+ + TSL+
Sbjct: 348 ALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLI 407
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMY+K GHL+ A VF ++ R ++ W A+I+G A +G + ++L +MQ +P++V
Sbjct: 408 DMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAV 467
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGT----SVIDMYSKCGVPSCARALF 335
+ + L AC+ G + G+ + R + +V G+ ++D+ + G A L
Sbjct: 468 TFTNLLCACSHSGLVDEGRLF--FNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELI 525
Query: 336 DQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMIET 372
++M S W ++ + I+G+ E A +++ET
Sbjct: 526 EKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLET 563
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/554 (35%), Positives = 322/554 (58%), Gaps = 2/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K +Y V +IA Y ++ SAR LF+EL R V ++NS+I +
Sbjct: 184 VLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNG 243
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + QM+ V DS+T L AC ++ +L +G + V+ G+ V +++L++
Sbjct: 244 LEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDM 303
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +N A F KM +V W+S+I V G EA+ + M+ +G+ D +
Sbjct: 304 YSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ ACA G VH + + ++ ++ V +L++MYAK G ++ A+ +F +
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
NIV+W +I G++QN L L+L ++MQ +PD V++ L ACA + L+ G+ I
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREI 482
Query: 301 HGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ +R+ F +L + +++DMY KCG+ A+ LFD + +D+I W V+IA YG+HG G
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFG 542
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+EA+S F +M ++P+ S+F S+L A +HSGL++EG FD M S+ I+P +HYAC
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL R+G + A K +++M +P A+W ALLSGC H + EKVA+ + +L P++
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPEN 662
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L++N +A +KWEEV +++ + K G+K G S +EV G+ + F D SH Q
Sbjct: 663 TRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQA 722
Query: 540 EDIVYVLKKLYLEM 553
+ I +L+KL ++M
Sbjct: 723 KMIDSLLRKLTMKM 736
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 253/470 (53%), Gaps = 8/470 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ +Y D+V R++F+ + + +N ++ Y++ + E +GL+ +M + +R
Sbjct: 96 AKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIR 155
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
DS TFT LK + ++ + + ++LG+G+ V +S++ Y KCG++ A +
Sbjct: 156 GDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARIL 215
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ +D+V W+SMI+G NG R ++ + +M G+D D ++ ++ ACA++G+
Sbjct: 216 FDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNL 275
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G ++H Y ++ + V +L+DMY+K G+L+ A+ VF M IV+W ++I+
Sbjct: 276 TLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAH 335
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+ GL + L EMQS G PD ++ S + ACA L G+ +H + + NL
Sbjct: 336 VREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNL 395
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++MY+KCG A +F Q+ ++++SWN +I Y + EAL LFL M +
Sbjct: 396 PVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QK 454
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEVE 431
+KPD T A +L A + +E+GR ++ K ++ H AC +VD+ + G +
Sbjct: 455 QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYF--SDLHVACALVDMYVKCGLLV 512
Query: 432 EALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDD 479
A ++ D M + + +W +++ G H K +I +V + P++
Sbjct: 513 LAQQLFD-MIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEE 561
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 220/448 (49%), Gaps = 15/448 (3%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSS-----TFTVALKACVSLMDLKMGEE 97
T+N++ + + K F +G +K R S T+ L+ C L L+ G+
Sbjct: 19 THNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKR 78
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
+ G D +G+ ++ +YV CG + + F+ + + W+ +++ G
Sbjct: 79 VHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGN 138
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
RE+V +++M++ GI D +++ A R VHGY ++ V S
Sbjct: 139 YRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNS 198
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ Y K G ++ A +F +S ++V+W ++ISG NG + + LE ++M + G + D
Sbjct: 199 LIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVD 258
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
S +LV+ L+ACA +G L LG+++H Y V+ F ++ +++DMYSKCG + A +F
Sbjct: 259 SATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFV 318
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+M ++SW IIA++ G EA+ LF +M ++PD S++ A + S +++
Sbjct: 319 KMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDK 378
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
GR + + K + ++++ A+ G +EEA I + + + W ++ G
Sbjct: 379 GREVHN-HIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK-NIVSWNTMIGG- 435
Query: 457 HNHKKFSIGEKVAKKVL----KLNPDDL 480
+ + S+ + + L +L PDD+
Sbjct: 436 --YSQNSLPNEALQLFLDMQKQLKPDDV 461
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 326/592 (55%), Gaps = 36/592 (6%)
Query: 1 MIKTNLSAYGNSVGRII--ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M++T L S R+I A + A+++F+++P + T+N++I AY+ +P
Sbjct: 58 MLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPH 117
Query: 59 EVLGLYNQMIKEDVR-PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ L ++ +M+ + PD TF +KA L +L G+ +++ G+DVF+ +S+
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
++ Y KCG++ F + R+D+V W+SMI V G P EA++ ++ M+ + + +
Sbjct: 178 IHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNG 237
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY--------------- 222
+ M+G++ ACA D FG VH Y R + + + +++DMY
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDK 297
Query: 223 ----------------AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
AK G D A +F M +I W ALIS + Q G LEL
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 357
Query: 267 MEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
E+Q S +PD V+LVS L ACAQ+G + LG IH Y ++ N L TS+IDMY K
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F ++ +D+ W+ +IA +HGHG++A++LF +M E VKP+ TF ++
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNI 477
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L A SH GLVEEGR +F+ M Y + P KHYACMVD+L RAG +EEA+++++ M P
Sbjct: 478 LCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAP 537
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
+VW ALL C H+ + E+ ++++L P + G + L+SN +A KW+ V+G+RK
Sbjct: 538 AASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRK 597
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
MR G+KK PG S +EV+G +H F++ D SH + I L ++ + I
Sbjct: 598 LMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI 649
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 11/280 (3%)
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH--LDLASHVFKNM 238
+ LI C++ + +H +R L D + L+ A + LD A VF +
Sbjct: 39 LSLIDQCSETKQLK---QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKL 296
N+ TW LI +A + +L + + M QS F PD + + A +++ L
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDF-PDKFTFPFLIKAASELEELFT 154
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GK+ HG ++ ++ + S+I Y+KCG +F + RD++SWN +I ++
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
G EEAL LF +M VKP+ T +LSA + E GR W + + +I +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR-WVHSYIERNRIGESLT 273
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
M+D+ + G VE+A ++ D M E + W +L G
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVG 312
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 306/528 (57%), Gaps = 1/528 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F ++ YN +I ++ K+SP E + L+ +M + V+PD TF LK C
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L GE+I ++ G+G+ FV ++++++Y CG++ A F++M +++ W+SM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
G +G E V + M + I DEV ++ ++ AC L D G ++ Y + L
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + TSLVDMYAK G +D A +F M R ++V W A+ISG++Q L+L E
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
MQ +P+ +++VS L +CA +G L+ GK +H + + R + LGT+++D Y+KCG
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ +F +M ++++SW V+I +G G++AL F M+E V+P+ TF +LSA
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+GLV+EGR F M + I+P +HY CMVD+L RAG +EEA + + +M +P
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
+W LL+ C HK IGE+ K+++ L P G + L+SN +A +WE+ VR M+
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+ G+KK PG S++E++G +H F ED H+Q E+I ++ + ++++
Sbjct: 557 EKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKS 604
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 211/394 (53%), Gaps = 11/394 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K ++G +I +Y ++ AR++F+E+ R V T+NS+ Y++ + EV
Sbjct: 150 IMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEV 209
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+++M++ D+R D T L AC L DL++GE I R E G + + +S++++
Sbjct: 210 VKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDM 269
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG+++ A F++M R+D+V WS+MI+G + REA+D + M+K ID +E+ M
Sbjct: 270 YAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITM 329
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ +CA LG G VH + ++ + L V + T+L+D YAK G ++ + VF M
Sbjct: 330 VSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV 389
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+++W LI G A NG LE M EP+ V+ + L AC+ G + G+ +
Sbjct: 390 KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHG 357
R F + ++D+ + G+ A M + + + W ++AS +H
Sbjct: 450 FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHK 509
Query: 358 H---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ GEE+L Q+I +++P HS LLS +
Sbjct: 510 NVEIGEESLK---QLI--ILEPTHSGDYILLSNI 538
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 3/330 (0%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M+ A+ F ++ D ++ MI G P EA+ +K M + + DE +++
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C+ L G +H ++ V+ +L+ MYA G +++A VF MS N+ TW
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++ +G+ ++G ++L EM D V+LVS L AC ++ L+LG+ I+ Y
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ N L TS++DMY+KCG AR LFDQM RD+++W+ +I+ Y EAL L
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDL 313
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M + + P+ T S+LS+ + G +E G+ W + K +++ T ++D A
Sbjct: 314 FHEMQKANIDPNEITMVSILSSCAVLGALETGK-WVHFFIKKKRMKLTVTLGTALMDFYA 372
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G VE ++++ M + L+ W L+ G
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLS-WTVLIQG 401
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 318/535 (59%), Gaps = 2/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A ++F + R ++N+++ + E + L + M +PD
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + A +L G+E+ A+ G +++ +G++++++Y KC + AFE
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KDL+ W+++I G N EA++ +++++ +G+D D +++ +++AC+ L F
Sbjct: 409 CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGY +R L D+ +Q ++V++Y + GH D A F+++ +IV+W ++I+
Sbjct: 469 IREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVH 527
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGL LEL ++ +PDS++++SAL A A + LK GK IHG+ +R+ F +
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI 587
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S++DMY+ CG +R +F ++ RDLI W +I + G+HG G EA++LF +M + V
Sbjct: 588 ASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENV 647
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH TF +LL A SHSGL+ EG+ +F++M Y+++P +HYACMVDLL+R+ +EEA
Sbjct: 648 IPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAY 707
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V SM +P VW ALL CH H +GE AK++L+ + + G +AL+SN FA +
Sbjct: 708 QFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADG 767
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W +V VR M+ +G+KK PG S +EV+ ++H F+ DKSH Q +DI L +
Sbjct: 768 RWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQF 822
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 260/496 (52%), Gaps = 18/496 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K++LSA+ + +++ +Y + A K+F+E+ R + T+N+++ A+ E
Sbjct: 72 LLKSHLSAFLAT--KLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEA 129
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ LY +M V D+ TF LKAC +L + ++G EI AV+ G+G VFV ++++ +
Sbjct: 130 IELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAM 189
Query: 121 YVKCGKMNEAMVAFEK--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y KCG + A V F+ M+++D V W+S+I+ V G+ EA+ ++RM++ G+ ++
Sbjct: 190 YGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTY 249
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ +Q D + G+ +HG +++ + DV V +L+ MYAK G ++ A VF +M
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM 309
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ V+W L+SG QN L L +MQ+ +PD VS+++ + A + G L GK
Sbjct: 310 LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGK 369
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y +R D N+ +G ++IDMY+KC F+ M +DLISW IIA Y +
Sbjct: 370 EVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNE 429
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSAL----SHSGLVEEGRYWFDLMVSKYKIQPT 413
EA++LF ++ + D S+L A S + + E Y F ++ +Q
Sbjct: 430 CHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNA 489
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC-HNHKKFSIGEKV-AKK 471
+V++ G + A + +S+ ++ + W ++++ C HN E + K
Sbjct: 490 ------IVNVYGEVGHRDYARRAFESIRSKD-IVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 472 VLKLNPDDLGIHALVS 487
+ PD + I + +S
Sbjct: 543 QTNIQPDSIAIISALS 558
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 244/452 (53%), Gaps = 13/452 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+IA+YG D+ AR LF+ + + DT +NSII A+ + E L L+ +M + V
Sbjct: 186 LIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVA 245
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ TF AL+ +K+G I A++ + DV+V ++++ +Y KCG+M +A
Sbjct: 246 SNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERV 305
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M +D V W+++++GLV N R+A++ ++ M+ D+V ++ LI A G+
Sbjct: 306 FASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNL 365
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH Y+IR L+ ++++ +L+DMYAK + + F+ M ++++W +I+G+
Sbjct: 366 LNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGY 425
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQN + L ++Q G + D + + S L AC+ + + IHGY +R +++
Sbjct: 426 AQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM 485
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L +++++Y + G AR F+ ++S+D++SW +I +G EAL LF + +T
Sbjct: 486 LQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN 545
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK--YKIQPTEKHYACMVDLLARAGEVE 431
++PD S LSA ++ +++G+ ++ K + P + +VD+ A G VE
Sbjct: 546 IQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVE 602
Query: 432 EALKIVDSMSTEPGLAVWVALLS-----GCHN 458
+ K+ S+ + L +W ++++ GC N
Sbjct: 603 NSRKMFHSVK-QRDLILWTSMINANGMHGCGN 633
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 203/414 (49%), Gaps = 21/414 (5%)
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
++ L CV++ L G+++ + ++ F+ + +L++Y KCG + +A+ F++M
Sbjct: 50 SLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTE 107
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+ + W++M+ V +G+ EA++ YK M+ G+ D +++AC LG+SR G +
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNG 257
HG +++ V V +L+ MY K G L A +F M + + V+W ++IS G
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEG 227
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGT 316
L L MQ G ++ + V+AL F+KLG IHG ++ F ++ +
Sbjct: 228 KCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVAN 287
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++I MY+KCG A +F M RD +SWN +++ + +AL+ F M + KP
Sbjct: 288 ALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKP 347
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ----PTEKHYACMVDLLARAGEVEE 432
D + +L++A SG + G+ V Y I+ + ++D+ A+ V+
Sbjct: 348 DQVSVLNLIAASGRSGNLLNGKE-----VHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKH 402
Query: 433 ALKIVDSMSTEPGLAVWVALLSG-----CHNHKKFSIGEKVAKKVLKLNPDDLG 481
+ M E L W +++G CH + ++ KV K + ++P +G
Sbjct: 403 MGYAFECMH-EKDLISWTTIIAGYAQNECH-LEAINLFRKVQVKGMDVDPMMIG 454
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 322/556 (57%), Gaps = 12/556 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + +AR LF+E+P+R + ++N++I Y + + E L L N + D
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD---- 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC D G I +++ G +++FV + +++LY + G++ + F+
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +DL+ W+S+I N QP A+ ++ M+ I D + ++ L + LGD R
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 196 GLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
SV G+++R+ L D+ + ++V MYAK G +D A VF + ++++W +ISG+A
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 255 QNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG A +E+ M+ G + + VS L AC+Q G L+ G +HG ++ ++
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ TS+ DMY KCG A +LF Q+ + + WN +IA +G HGHGE+A+ LF +M++
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPDH TF +LLSA SHSGLV+EG++ F++M + Y I P+ KHY CMVD+ RAG++E
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
ALK + SMS +P ++W ALLS C H +G+ ++ + ++ P+ +G H L+SN +A
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KWE V +R G++K PG+S +EV+ ++ F +++H YE++ L L +
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAK 726
Query: 553 MRAISSWLQGHMEEHE 568
++ I G++ +H
Sbjct: 727 LKMI-----GYVPDHR 737
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 256/488 (52%), Gaps = 31/488 (6%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ-MIKEDV 72
+++ LY ++ AR F+ + R V +N +I Y R + EV+ ++ M+ +
Sbjct: 90 AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD TF LKAC +++D G +I A++ G+ DV+V +S+++LY + + A +
Sbjct: 150 TPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +D+ W++MI+G +G +EA+ ++ D V ++ L+ AC + GD
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGD 262
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+++H YSI+ L ++ V L+D+YA+ G L VF M ++++W ++I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+ N + L EM+ +PD ++L+S +Q+G ++ +S+ G+T+R+ F
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +G +V+ MY+K G+ ARA+F+ + + D+ISWN II+ Y +G EA+ ++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 371 ET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
E + + T+ S+L A S +G + +G ++ K + + D+ + G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGR 501
Query: 430 VEEALKI---VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVA---KKVLK--LNPDD 479
+E+AL + + +++ P W L++ G H H GEK K++L + PD
Sbjct: 502 LEDALSLFYQIPRVNSVP----WNTLIACHGFHGH-----GEKAVMLFKEMLDEGVKPDH 552
Query: 480 LGIHALVS 487
+ L+S
Sbjct: 553 ITFVTLLS 560
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 189/402 (47%), Gaps = 44/402 (10%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-M 168
+V + + ++NLY G + A F+ +Q +D+ W+ MI+G G E + + M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
G+ D +++AC + D G +H +++ DV V SL+ +Y++ +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
A +F M ++ +W A+ISG+ Q+G A L L +++ DSV++VS L AC
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSAC 257
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ G G +IH Y+++ + L + +ID+Y++ G + +FD+M RDLISWN
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWN 317
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY-------- 399
II +Y ++ A+SLF +M + ++PD T SL S LS G + R
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 400 -WF----------DLMVSKYKIQPTEK------------HYACMVDLLARAGEVEEALKI 436
WF +M +K + + + + ++ A+ G EA+++
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437
Query: 437 VDSMSTEPGLA----VWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ M E +A WV++L C G K+ ++LK
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 158/342 (46%), Gaps = 37/342 (10%)
Query: 161 AVDAYKRMKKEGIDADEVV-MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+ +A + K G ++ E+ + L + C +L ++ +H + +V + LV
Sbjct: 37 SANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLV 93
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDS 278
++Y G++ LA H F ++ ++ W +ISG+ + G + + + M S G PD
Sbjct: 94 NLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDY 153
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+ S L AC + G IH ++ F +++ + S+I +YS+ AR LFD+
Sbjct: 154 RTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M RD+ SWN +I+ Y G+ +EAL+L + D T SLLSA + +G G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 398 RYWFDLMVSKYKIQ---PTEKHYAC-MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ + Y I+ +E + ++DL A G + + K+ D M L W +++
Sbjct: 267 -----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD-LISWNSII 320
Query: 454 SGCHNHKKFSIGEKVAK--------KVLKLNPDDLGIHALVS 487
K + + E+ + ++ ++ PD L + +L S
Sbjct: 321 ------KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 316/543 (58%), Gaps = 2/543 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +IA Y + SA LF+EL V ++NS+I L ++ QM+ V
Sbjct: 233 VNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV 292
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
D +T L AC ++ +L +G + V+ + +V +++L++Y KCG +N A
Sbjct: 293 EVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE 352
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F KM +V W+S+I V G +A+ + M+ +G+ D + ++ ACA
Sbjct: 353 VFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS 412
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH Y I+ + ++ V +L++MYAK G ++ A VF + +IV+W +I G
Sbjct: 413 LDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGG 472
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-N 311
++QN L LEL ++MQ F+PD +++ L ACA + L G+ IHG+ +RR F +
Sbjct: 473 YSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 531
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L + +++DMY+KCG+ A+ LFD + +DLISW V+IA YG+HG G EA+S F +M
Sbjct: 532 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 591
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++PD S+F+++L+A SHSGL+ EG +F+ M ++ ++P +HYAC+VDLLAR G +
Sbjct: 592 AGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 651
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A K ++SM +P +W LLSGC H + EKVA+ + +L PD+ + +++N +A
Sbjct: 652 KAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYA 711
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+KWEEV +RK M+K G K+ PG S +EV G+ + F+ + H Q + I +L KL +
Sbjct: 712 EAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTM 771
Query: 552 EMR 554
+M+
Sbjct: 772 QMQ 774
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 255/478 (53%), Gaps = 8/478 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ +Y D+V RK+F+++ V +N ++ Y++ + E + L+ +M K V
Sbjct: 133 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 192
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ TFT LK +L +K + + ++LG+G++ V +S++ Y K G + A
Sbjct: 193 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 252
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ D+V W+SMING V NG ++ + +M G++ D ++ ++ ACA++G+
Sbjct: 253 FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNL 312
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G ++HG+ ++ + +V +L+DMY+K G+L+ A+ VF M IV+W ++I+ +
Sbjct: 313 SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+ GL + L EMQS G PD ++ S + ACA L G+ +H Y ++ NL
Sbjct: 373 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 432
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I+MY+KCG AR +F ++ +D++SWN +I Y + EAL LFL M +
Sbjct: 433 PVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QK 491
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEVE 431
KPD T A +L A + +++GR ++ + ++ H AC +VD+ A+ G +
Sbjct: 492 QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF--SDLHVACALVDMYAKCGLLV 549
Query: 432 EALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
A + D M + L W +++ G H +I ++ + PD+ A+++
Sbjct: 550 LAQLLFD-MIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILN 606
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 201/380 (52%), Gaps = 3/380 (0%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
+++ L+ C L+ G+ + + G D +G+ ++ +YV CG + + F+K
Sbjct: 95 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + W+ +++ G RE+V +K+M+K G+ + +++ A LG +
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
VHGY ++ + V SL+ Y K G ++ A ++F +S ++V+W ++I+G N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
G +G+ LE+ ++M G E D +LVS L+ACA IG L LG+++HG+ V+ F +V
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++DMYSKCG + A +F +M ++SW IIA+Y G +A+ LF +M V+
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD T S++ A + S +++GR ++ K + ++++ A+ G VEEA +
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVI-KNGMGSNLPVTNALINMYAKCGSVEEA-R 452
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+V S + W ++ G
Sbjct: 453 LVFSKIPVKDIVSWNTMIGG 472
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 306/540 (56%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + A KLF +P V T+N +I + + E L+++MI V PD
Sbjct: 114 LVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPD 173
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L + LK G+EI + G DVF+ S+++++Y KC + A F+
Sbjct: 174 SITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFK 233
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V +++I+G V NG +A++ ++ + +E + + V + ++ ACA L
Sbjct: 234 QSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNL 293
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ L+ V ++++DMYAK G LDLA +F+ M + V W A+I+ +Q
Sbjct: 294 GKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQ 353
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG ++L +M G D VS+ +AL ACA + L GK+IH + ++ FD +
Sbjct: 354 NGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFA 413
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMY KCG S AR +FD M+ ++ +SWN IIA+YG HGH E +L+LF +M+E +
Sbjct: 414 ESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGI 473
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PDH TF ++LSA H+G V++G +F M +Y I +HYAC+VDL RAG + EA
Sbjct: 474 QPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAF 533
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + +M P VW LL C H + E ++ +L L+P++ G + L+SN A
Sbjct: 534 ETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAG 593
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W V +R M+K G++KVPGYS +EVN H F+ D SH + I VL L LE+R
Sbjct: 594 QWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELR 653
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 234/475 (49%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I AR+LF+++P + +N ++ + + P + ++ M +P+
Sbjct: 13 LIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPN 72
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L C S + G ++ + G+ D V ++++ +Y K G++++A+ F
Sbjct: 73 SITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFN 132
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++V W+ MI G V NG EA + M G+ D + + + + +
Sbjct: 133 TMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQ 192
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY +R + LDV ++++L+D+Y K + +A +FK + ++IV A+ISG+
Sbjct: 193 GKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVL 252
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGL LE+ + P++V+L S L ACA + L LGK +H ++ D +
Sbjct: 253 NGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHV 312
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY+KCG A +F +M +D + WN II + +G +EA+ LF QM +
Sbjct: 313 GSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGL 372
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
D + ++ LSA ++ + G+ M+ K + ++D+ + G + A
Sbjct: 373 SYDCVSISAALSACANLPALHHGKAIHSFMI-KGAFDSEVFAESALIDMYGKCGNLSVAR 431
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ D M E W ++++ +H + + K+L+ + PD + ++S
Sbjct: 432 CVFDMMR-EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 182/358 (50%), Gaps = 3/358 (0%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+G+ D FVGSS++ LY + G + +A F+KM KD V W+ M+NG V G+P AV
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
++ M+ + + ++ CA S FG +HG I + D V +LV MY+K
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G L A +F M N+VTW +I+GF QNG L EM S G PDS++ S
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L + + LK GK IHGY +R ++ L +++ID+Y KC A +F Q + D+
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+ II+ Y ++G +AL +F ++E + P+ T AS+L A + + G+
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKE-LHA 299
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ K+ + + ++D+ A+ G ++ A +I M E W A+++ C + K
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRM-PEKDAVCWNAIITNCSQNGK 356
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK + + +I +YG ++ AR +F+ + + ++NSII AY
Sbjct: 402 MIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVS 461
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLN 119
L L+++M+++ ++PD TF L AC + G + +R E G + + +++
Sbjct: 462 LALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVD 521
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQ 157
L+ + G++NEA + M D W +++ +G
Sbjct: 522 LFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGN 560
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 321/576 (55%), Gaps = 37/576 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y +I A ++F+++ R V ++ +II A ++ E LY +M++ + P+
Sbjct: 220 LITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPN 279
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF L +C + L G I E G DV V ++++ +Y KC + +A F+
Sbjct: 280 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFD 339
Query: 136 KMQRKDLVCWSSMINGLVFNG-QPREAVDA----YKRMKKEGIDADEVVMMGLIQACADL 190
+M ++D++ WS+MI G +G Q +E++D +RM++EG+ ++V M +++AC+
Sbjct: 340 RMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVH 399
Query: 191 GDSRFGLSVH------GYSIRRHL-------------------------NLDVKVQTSLV 219
G G +H G+ R L N +V SL+
Sbjct: 400 GALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLL 459
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
MY K G L A VF MS N+V+W +I+G+AQ+G ELL M+ GF+PD V
Sbjct: 460 TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRV 519
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+++S L AC + L+ GK +H V+ + + V+ TS+I MYSKCG + AR +FD++
Sbjct: 520 TIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKI 579
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+RD ++WN ++A YG HG G EA+ LF +M++ V P+ TF +++SA +GLV+EGR
Sbjct: 580 SNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGR 639
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
F +M ++++P ++HY CMVDLL RAG ++EA + + M EP ++VW ALL C +
Sbjct: 640 EIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKS 699
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
H + E A +L+L P + ++ +SN +A +W++ VRK M G+KK G S
Sbjct: 700 HDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGES 759
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+E++G +H F+ ED +H + + I L+ L EM+
Sbjct: 760 SIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMK 795
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 208/408 (50%), Gaps = 11/408 (2%)
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF 112
R + ++LG+ Q + +S+T+ ++ C L + G+ + ++ ELG D++
Sbjct: 58 RLKEAIQLLGIIKQ---RGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+S++N Y K G + F +M +D+V WSSMI N P +A D ++RMK
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
I+ + + + +++AC + +H + DV V T+L+ MY+K G + LA
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
+F+ M N+V+W A+I AQ+ EL +M G P++V+ VS L +C
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L G+ IH + R + ++V+ ++I MY KC AR FD+M RD+ISW+ +IA
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354
Query: 352 SYGIHGHGE-EALSLFLQMIETM----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
Y G+ + E+L Q++E M V P+ TF S+L A S G +E+GR +S
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ-IHAEIS 413
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
K + + ++ A+ G + EA ++ M + + W +LL+
Sbjct: 414 KVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLT 460
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 247/517 (47%), Gaps = 44/517 (8%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS +I Y D+ S ++F + LR V T++S+I AY+ P + + +M
Sbjct: 116 GNS---LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
++ P+ TF LKAC + L+ EI G DV V ++++ +Y KCG+++
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+KM+ +++V W+++I + + EA + Y++M + GI + V + L+ +C
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G +H + R L DV V +L+ MY K + A F MS+ ++++W A+
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352
Query: 250 ISGFAQNGLA-----GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH--- 301
I+G+AQ+G +LL M+ G P+ V+ +S L AC+ G L+ G+ IH
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
Query: 302 ---GYTVRR------FDF--------------------NLVLGTSVIDMYSKCGVPSCAR 332
G+ R F+ N+V S++ MY KCG + A
Sbjct: 413 SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAE 472
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+F +M +R+++SWN++IA Y G + L M +PD T S+L A
Sbjct: 473 KVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALS 532
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E G+ V K ++ ++ + ++ GEV EA + D +S +A W A+
Sbjct: 533 ALERGKLVHAEAV-KLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVA-WNAM 590
Query: 453 LSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
L+G H + K++LK + P+++ A++S
Sbjct: 591 LAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVIS 627
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 148/301 (49%), Gaps = 3/301 (0%)
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G+ +EA+ +K+ G+ + +I+ CA L G VH L +D+ +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
SL++ Y+K G + VF+ M+ ++VTW ++I+ +A N + M+ E
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ ++ +S L AC L+ + IH + ++ + T++I MYSKCG S A +
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F +M+ R+++SW II + H EA L+ +M++ + P+ TF SLL++ + +
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
GR +S+ ++ ++ + + +++A + D MS ++ W A+++
Sbjct: 297 NRGRR-IHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVIS-WSAMIA 354
Query: 455 G 455
G
Sbjct: 355 G 355
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 316/541 (58%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
++ LY + A K+FEE + S++ Y + P E L L++QM+ D V
Sbjct: 145 LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVL 204
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T + AC L+++K G + + + D+ + +S+LNLY K G A F
Sbjct: 205 DPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLF 264
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
KM KD++ WS+MI N EA++ + M ++ + + V ++ +QACA +
Sbjct: 265 SKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLE 324
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ + LD V T+L+DMY K D A +F+ + + ++V+W AL+SG+A
Sbjct: 325 EGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYA 384
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG+A ++ + M S G +PD+V++V L A +++G + +HGY VR F+ N+
Sbjct: 385 QNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVF 444
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-T 372
+G S+I++YSKCG A LF M RD++ W+ +IA+YGIHG G EAL +F QM++ +
Sbjct: 445 VGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNS 504
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P++ TF S+LSA SH+GLVEEG FD MV Y+++P +H+ MVDLL R G++ +
Sbjct: 505 TVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGK 564
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+ I++ M G VW ALL C H +GE AK + L+P G + L+SN +A+
Sbjct: 565 AMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAV 624
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+ KW+ VA +R +++ G+KK+ G S+VEV G +H+F+ D+ H + I +L+KL +
Sbjct: 625 DGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQ 684
Query: 553 M 553
M
Sbjct: 685 M 685
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 270/436 (61%), Gaps = 1/436 (0%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+YV +++ A + FE + W+ MI G +G+ +++ Y +M ++G+ D+
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+++CA L D + G +H + + + D+ V +LVDMYAK G ++ A VF M+
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V+W ++ISG+A NG TL M+S G P+ VS++S LLAC +G L+ G+
Sbjct: 881 VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H Y ++ F+F++++ T+++DMYSKCG AR LFD+ +DL+ W+ +IASYGIHGH
Sbjct: 941 FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G +A+ LF QM++ V+P H TF +LSA SHSGL+EEG+ +F LM ++ I +YA
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL RAG++ EA+ ++++M EP ++W +LL C H + EK+A + L+P
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPV 1120
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
G H L+SN +A + +W EV VRK M + G K+ G+S+VE + ++H F + D+SH Q
Sbjct: 1121 HAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQ 1180
Query: 539 YEDIVYVLKKLYLEMR 554
+E + L++L M+
Sbjct: 1181 WEKLYAKLEELAAPMK 1196
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 254/451 (56%), Gaps = 18/451 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
++ +LY + +ARK+F+E P V +NS + +Y R++ E L L++ MI
Sbjct: 41 KLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEA 100
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD+ T +ALKAC L L++G+ I +K E+G +D+FVGS+++ LY KCG+M EA
Sbjct: 101 PDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG--SDMFVGSALVELYSKCGQMGEA 158
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACAD 189
+ FE+ QR D V W+SM+ G N P EA+ + +M + + D V ++ ++ ACA
Sbjct: 159 LKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQ 218
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + + G VHG IRR + D+ + SL+++YAKTG +A+++F M ++++W +
Sbjct: 219 LLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTM 278
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRF 308
I+ +A N A L L EM FEP+SV++VSAL ACA L+ GK IH V + F
Sbjct: 279 IACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGF 338
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + + T++IDMY KC P A LF ++ +D++SW +++ Y +G +++ +F
Sbjct: 339 ELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRN 398
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY----ACMVDLL 424
M+ ++PD +L+A S G+ ++ L + Y ++ A +++L
Sbjct: 399 MLSDGIQPDAVAVVKILAASSELGIFQQA-----LCLHGYVVRSGFNSNVFVGASLIELY 453
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ G + +A+K+ M + +W ++++
Sbjct: 454 SKCGSLGDAVKLFKGMIVR-DVVIWSSMIAA 483
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 188/371 (50%), Gaps = 5/371 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y N I +A +FE++P +N +I ++ L LY++M+++ ++PD
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F ALK+C L DL+ G+ I + V G ND+FV ++++++Y KCG + A + F+KM
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+DLV W+SMI+G NG E + + M+ G+ + V ++ ++ AC +LG R G
Sbjct: 881 VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
H Y I+ D+ V T+++DMY+K G LDLA +F + ++V W A+I+ + +G
Sbjct: 941 FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGT-- 316
++L +M G P V+ L AC+ G L+ GK F L
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060
Query: 317 SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++D+ + G S A L + M D W ++ + IH + + A + + +
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFH--LD 1118
Query: 376 PDHSTFASLLS 386
P H+ + LLS
Sbjct: 1119 PVHAGYHVLLS 1129
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 174/300 (58%), Gaps = 6/300 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ LY A LF ++P + V +++++I Y+ E+ E L L+++MI++
Sbjct: 244 VNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRF 303
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+S T AL+AC +L+ G++I + AV G+ D V ++++++Y+KC +EA+
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD 363
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ +KD+V W ++++G NG +++ ++ M +GI D V ++ ++ A ++LG
Sbjct: 364 LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 423
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ L +HGY +R N +V V SL+++Y+K G L A +FK M ++V W ++I+
Sbjct: 424 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 483
Query: 253 FAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLG-----KSIHGYTVR 306
+ +G G LE+ +M ++ P++V+ +S L AC+ G ++ G + +H Y +R
Sbjct: 484 YGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLR 543
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 183/364 (50%), Gaps = 8/364 (2%)
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG 156
++ + + G +D F + + +LY KC + A F++ ++ W+S +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 157 QPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNLDVKV 214
Q E + + M G D + ++ACA L G +HG++ + + D+ V
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL--MEMQSC 272
++LV++Y+K G + A VF+ R + V W ++++G+ QN L L M M C
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCA 331
D V+LVS + ACAQ+ +K G +HG +RR FD +L L S++++Y+K G A
Sbjct: 202 -VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIA 260
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
LF +M +D+ISW+ +IA Y + EAL+LF +MIE +P+ T S L A + S
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
+EEG+ + V K + ++D+ + +EA+ + + + + WVA
Sbjct: 321 RNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK-DVVSWVA 378
Query: 452 LLSG 455
LLSG
Sbjct: 379 LLSG 382
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L D ++ T MY +D AS VF+++ W +I GFA +G S+LEL
Sbjct: 748 LQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYS 807
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVIDMYSKCG 326
+M G +PD + AL +CA + L+ GK IH + V N L + +++DMY+KCG
Sbjct: 808 KMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCG 867
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR +FD+M RDL+SW +I+ Y +G+ E L F M + V P+ + S+L
Sbjct: 868 DIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLL 927
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + G + +G WF V + + ++D+ ++ G ++ A + D + + L
Sbjct: 928 ACGNLGALRKGE-WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DL 985
Query: 447 AVWVALLS--GCHNHKKFSI 464
W A+++ G H H + +I
Sbjct: 986 VCWSAMIASYGIHGHGRKAI 1005
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 10/241 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y DI +AR +F+++ +R + ++ S+I Y+ E LG ++ M V P+
Sbjct: 859 LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPN 918
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC +L L+ GE ++ G+ D+ V ++++++Y KCG ++ A F+
Sbjct: 919 RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD 978
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DL 190
+ KDLVCWS+MI +G R+A+D + +M K G+ V ++ AC+ +
Sbjct: 979 ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
G F L + I R L+ +VD+ + G L A + +NM + WG+L
Sbjct: 1039 GKMYFQLMTEEFVIARKLS----NYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094
Query: 250 I 250
+
Sbjct: 1095 L 1095
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 200/571 (35%), Positives = 332/571 (58%), Gaps = 8/571 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + A K+F ++P++ V ++N++I + + + LG+ N+M E V+ D
Sbjct: 162 LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T L C D+ G I ++ G +DVFV ++++N+Y K G++ +A + F+
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD 281
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ +DLV W+S+I N P A+ +K M+ GI D + ++ L + L D R
Sbjct: 282 QMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRI 341
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
S+ G+ IRR L+ DV + +LV+MYAK G+++ A VF + R + ++W L++G+
Sbjct: 342 SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT 401
Query: 255 QNGLAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNGLA ++ M+ C P+ + VS + A + +G L+ G IH ++ ++
Sbjct: 402 QNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV 461
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T +ID+Y KCG A +LF ++ + WN IIAS GIHG GEEAL LF M+
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK DH TF SLLSA SHSGLV+EG+ FD+M +Y I+P+ KHY CMVDLL RAG +E+
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEK 581
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++V +M +P ++W ALLS C + +G + ++L+++ +++G + L+SN +A
Sbjct: 582 AYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+KWE V VR R G++K PG+S V V + F +++H +Y +I LK L +
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAK 701
Query: 553 MRAIS-----SWLQGHMEEHEEHDPLSTAAQ 578
M+++ S++ +EE E+ L++ ++
Sbjct: 702 MKSLGYVPDYSFVYQDIEEDEKEQILNSHSE 732
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 244/464 (52%), Gaps = 32/464 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK----E 70
++I LY DI +R F+ + + + ++NSII AY R E + NQ+
Sbjct: 59 KLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGG 118
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+RPD TF LKACVSL+D G+++ ++G+ +DVFV +S+++LY + G ++ A
Sbjct: 119 HLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVA 175
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M KD+ W++MI+G NG A+ RMK EG+ D + + ++ CA
Sbjct: 176 HKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G+ +H + ++ L+ DV V +L++MY+K G L A VF M ++V+W ++I
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--F 308
+ + QN + L MQ G PD +++VS +Q+ ++ +SI G+ +RR
Sbjct: 296 AAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWL 355
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D ++V+G ++++MY+K G +CA +FDQ+ +D ISWN ++ Y +G EA+ +
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 369 MIETM-VKPDHSTFASLLSALSHSGLVEEG----------RYWFDLMVSKYKIQPTEKHY 417
M E P+ T+ S++ A SH G +++G + D+ V+
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA----------- 464
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
C++DL + G +E+A+ + + + + W A+++ H +
Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGR 507
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 9/356 (2%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
G ++ + + ++NLYV G ++ + F+ + +K++ W+S+I+ V G+ EA++
Sbjct: 48 FGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNC 107
Query: 165 YKRMKKEG----IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
++ + D +++AC L D G VH + DV V SLV
Sbjct: 108 VNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVH 164
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+Y++ G LD+A VF +M ++ +W A+ISGF QNG A L +L M+ G + D+++
Sbjct: 165 LYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTIT 224
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
+ S L CAQ + G IH + ++ D ++ + ++I+MYSK G A+ +FDQM+
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
RDL+SWN IIA+Y + AL F M ++PD T SL S S R
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + + +V++ A+ G + A + D + + ++ W L++G
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS-WNTLVTG 399
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+VL T +I++Y G S +R+ FD + +++ SWN II++Y G EA++ Q+
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLF 112
Query: 371 ETM----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++PD TF +L A LV+ + V K + A +V L +R
Sbjct: 113 SMCGGGHLRPDFYTFPPILKAC--VSLVDGKK--VHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSG-CHN 458
G ++ A K+ M + + W A++SG C N
Sbjct: 169 YGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQN 200
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 317/542 (58%), Gaps = 7/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
I+ +Y + ARK+F+ +P + +N++I Y + E E + ++ +I E R
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D++T L A L +L++G +I A + G + +V + ++LY KCGK+ A F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF 279
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ +R D+V +++MI+G NG+ ++ +K + G ++ L+ L
Sbjct: 280 REFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL---M 336
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
++HGYS++ + V T+L +Y+K ++ A +F ++ +W A+ISG+
Sbjct: 337 LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NL 312
QNGL + L EMQ+ F P+ V++ L ACAQ+G L LGK +H VR DF ++
Sbjct: 397 QNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSI 455
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T++I MY+KCG + AR LFD M ++ ++WN +I+ YG+HGHG+EAL++F +M+ +
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNS 515
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P TF +L A SH+GLV+EG F+ M+ +Y +P+ KHYAC+VD+L RAG ++
Sbjct: 516 GIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQR 575
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL+ +++M +PG +VW LL C HK ++ V++K+ +L+PD++G H L+SN +
Sbjct: 576 ALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ + + A VR+T +K + K PGY+++E+ H F D+SH Q + I L+KL +
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGK 695
Query: 553 MR 554
MR
Sbjct: 696 MR 697
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 232/464 (50%), Gaps = 26/464 (5%)
Query: 17 IALYGGKNDI----------------VSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
I L+G +NDI AR +F + V +N ++ +S ESP
Sbjct: 43 IVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSS 102
Query: 61 LGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L ++ + K D++P+SST+ A+ A D + G I +A+ G +++ +GS+++
Sbjct: 103 LAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVK 162
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEV 178
+Y K ++ +A F++M KD + W++MI+G N E++ ++ + E D
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ ++ A A+L + R G+ +H + + V T + +Y+K G + +AS +F+
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREF 282
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
R +IV + A+I G+ NG +L L E+ G + S +LVS + G L L
Sbjct: 283 RRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVS---GHLMLIY 339
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+IHGY+++ F + + T++ +YSK AR LFD+ + L SWN +I+ Y +G
Sbjct: 340 AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
E+A+SLF +M + P+ T +LSA + G + G++ DL+ S + +
Sbjct: 400 LTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVS 458
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNH 459
++ + A+ G + EA ++ D M + + W ++S G H H
Sbjct: 459 TALIGMYAKCGSIAEARRLFDFMPKKNEV-TWNTMISGYGLHGH 501
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 170/389 (43%), Gaps = 8/389 (2%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
KT ++ + I+LY I A LF E + YN++I Y+ L
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLS 308
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +++ + SST + LM + I +++ + + V +++ +Y
Sbjct: 309 LFKELMLSGAKLKSSTLVSLVPVSGHLM---LIYAIHGYSLKSNFLSHTSVSTALTTVYS 365
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
K ++ A F++ K L W++MI+G NG +A+ ++ M+ + V +
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITC 425
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ ACA LG G VH + V T+L+ MYAK G + A +F M + N
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
VTW +ISG+ +G L + EM + G P V+ + L AC+ G +K G I
Sbjct: 486 EVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 303 YTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHG 359
+ R+ F + V+D+ + G A + M + S W ++ + IH
Sbjct: 546 SMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDT 605
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSAL 388
A ++ ++ E + PD+ + LLS +
Sbjct: 606 NLARTVSEKLFE--LDPDNVGYHVLLSNI 632
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+N ++ + + +Y N+I SARKLF+E P + + ++N++I Y++ + +
Sbjct: 346 LKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M + P+ T T L AC L L +G+ + + + ++V ++++ +Y
Sbjct: 406 SLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + EA F+ M +K+ V W++MI+G +G +EA+ + M GI V +
Sbjct: 466 AKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFL 525
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS- 239
++ AC+ G + G + I R+ VK +VD+ + GHL A + M
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPI 585
Query: 240 RINIVTWGALISG---FAQNGLAGSTLELLMEMQSCGFEPDSV 279
+ W L+ LA + E L E+ +PD+V
Sbjct: 586 QPGPSVWETLLGACRIHKDTNLARTVSEKLFEL-----DPDNV 623
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 301/535 (56%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I R++F E+P+R V ++ +II R E L +++M + V D
Sbjct: 157 LLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYD 216
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF +ALKAC L G EI +A++ G+ FV +++ +Y KCGK+ + FE
Sbjct: 217 SYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFE 276
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM +D+V W+++I LV GQ AV A+ RM++ + +E +I CA+L +
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 336
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + L + V+ S++ MYAK G L +S +F M+R +IV+W +I+G+ Q
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ 396
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G ELL M+ G +P +L S L AC + L+ GK +H Y + + ++
Sbjct: 397 GGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMV 456
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++I+MY KCG A +FD ++ D++SW +I Y HG+ E + LF ++ +
Sbjct: 457 LSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGL 516
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD TF +LSA SH+GLV+ G ++F+ M KY+I P+++HY CM+DLL RAG + +A
Sbjct: 517 RPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAE 576
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++++M VW LL C H G + A+++L+L P+ G H ++N +A +
Sbjct: 577 HMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKG 636
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW E A +RK M+ G+ K PG+S ++V + AF+ D+SH Q EDI +L L
Sbjct: 637 KWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 245/493 (49%), Gaps = 31/493 (6%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALKAC 86
+AR++F+++ + ++ ++I Y E L L+ M ++ +R D ++A KAC
Sbjct: 67 NARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKAC 126
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
D+ GE + AV+ G N VFVGS++L++Y K GK+ E F +M +++V W+
Sbjct: 127 GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 186
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++I GLV G +EA+ + M + ++ D ++ACAD G +G +H ++++
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++ V +L MY K G L+ +F+ MS ++V+W +I+ Q G ++
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+ M+ P+ + + + CA + ++ G+ +H + +L + S++ MY+KC
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + + +F +M RD++SW+ IIA Y GH EA L M KP AS+L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA + ++E G+ ++S ++ T + ++++ + G +EEA +I D+ +
Sbjct: 427 SACGNMAILEHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDD- 484
Query: 446 LAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPD-----------------DLGIHA 484
+ W A+++G H + + EK+ + + L PD DLG H
Sbjct: 485 IVSWTAMINGYAEHGYSREVIDLFEKIPR--VGLRPDSVTFIGVLSACSHAGLVDLGFHY 542
Query: 485 LVSNFFAMEQKWE 497
F AM +K++
Sbjct: 543 ----FNAMSKKYQ 551
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 184/377 (48%), Gaps = 4/377 (1%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
VA C+ L L+ + + + D+ + L VK G + A F+KM +K
Sbjct: 19 VASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQK 78
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSV 199
D + W+++I+G V EA+ +K M+ E G+ D ++ +AC D +G +
Sbjct: 79 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HGY+++ L V V ++L+DMY K G + VF M N+V+W A+I+G + G
Sbjct: 139 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 198
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L EM E DS + AL ACA G L G+ IH +++ FD + + ++
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
MY+KCG LF++M RD++SW II + G E A+ F++M E+ V P+
Sbjct: 259 ATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 318
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TFA+++S ++ +E G L++ + + ++ + A+ G++ + I
Sbjct: 319 YTFAAVISGCANLARIEWGEQLHALIL-HLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 439 SMSTEPGLAVWVALLSG 455
M T + W +++G
Sbjct: 378 EM-TRRDIVSWSTIIAG 393
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 315/540 (58%), Gaps = 3/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y DI +AR LF+++P R ++N++I Y E L L++ M + V PD
Sbjct: 239 LITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPD 298
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T AC L + ++G + V+ +G D+ + +S++ +Y G++ EA F
Sbjct: 299 LITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFS 358
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ KD+V W++MI LV + P +AV+ YK M+ EGI DE+ ++ ++ ACA +G
Sbjct: 359 RMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL 418
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H +I+ L V V SL+DMY+K +D A VF+N+S N+V+W +LI G
Sbjct: 419 GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRI 478
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N + L +M+ +P+SV+L+S L ACA+IG L GK IH + +R F+ L
Sbjct: 479 NNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY +CG A F+ Q +D+ +WN+++ Y G + A+ LF +M+E +
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF SLL A S SG+V EG +F++M +KY + P KHYAC+VD+L RAG++++A
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M P A+W ALL+ C H+ +GE AK+V + + +G + L+ N +A
Sbjct: 657 DFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCG 716
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W++V+ VR MR+ G+ PG S VE+ G++HAF+ D SH+Q ++I VL +M+
Sbjct: 717 NWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 253/484 (52%), Gaps = 18/484 (3%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ + +G +++ A +F ++ R V ++N ++ Y++ E L LY++M+
Sbjct: 135 GNALLSMFVRFG---NLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
++RP+ TF LK C + D+ G+EI + G+ +DV VG++++ +YVKCG ++
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F+KM ++D + W++MI+G NG E ++ + M++ +D D + M + AC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + R G VHGY ++ D+ + SL+ MY+ G L+ A VF M ++V+W A+
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I+ + L +E M+ G PD ++LVS L ACA IG L LG +H ++
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++++ S+IDMYSKC A +F + ++++SW +I I+ EAL F Q
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLL 424
M E+M KP+ T S+LSA + G + G+ + V P ++D+
Sbjct: 492 MKESM-KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA-----ILDMY 545
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGI 482
R G AL +S + + W LL+G + + ++ K+L+L +PD++
Sbjct: 546 VRCGRKVPALNQFNSQKKD--VTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITF 603
Query: 483 HALV 486
+L+
Sbjct: 604 ISLL 607
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 183/354 (51%), Gaps = 4/354 (1%)
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
V +G+++L+++V+ G + +A F KM +D+ W+ ++ G G EA++ Y RM
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
I + +++ CA + D G +H + IR DV V +L+ MY K G +
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A +F M + + ++W A+ISG+ +NG LEL M+ +PD +++ + AC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 291 IGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+ +LG+ +HGY V+ F ++ + S+I MYS G A +F +M+S+D++SW +
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IAS H +A+ + M + PD T S+LSA + G ++ G ++ +
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH-NHKKF 462
+ + ++D+ ++ V+ AL++ ++S + + W +L+ G N++ F
Sbjct: 432 VSHVIVSNS-LIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRSF 483
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 3/310 (0%)
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
L G +A+ + M + I+ +E + L++ C G V+ L
Sbjct: 72 LCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLC 131
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V++ +L+ M+ + G+L A +VF MS ++ +W L+ G+A+ G L L M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
P+ + S L CA + + GK IH + +R F+ ++ +G ++I MY KCG S
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR LFD+M RD ISWN +I+ Y +G G E L LF M E V PD T ++ SA
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
GR +V K + ++ + + G +EEA + M ++ + W
Sbjct: 312 LDNERLGRGVHGYVV-KSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKD-VVSWT 369
Query: 451 ALLSGCHNHK 460
A+++ +HK
Sbjct: 370 AMIASLVSHK 379
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 315/540 (58%), Gaps = 3/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y DI +AR LF+++P R ++N++I Y E L L++ M + V PD
Sbjct: 239 LITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPD 298
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T AC L + ++G + V+ +G D+ + +S++ +Y G++ EA F
Sbjct: 299 LITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFS 358
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ KD+V W++MI LV + P +AV+ YK M+ EGI DE+ ++ ++ ACA +G
Sbjct: 359 RMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL 418
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H +I+ L V V SL+DMY+K +D A VF+N+S N+V+W +LI G
Sbjct: 419 GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRI 478
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N + L +M+ +P+SV+L+S L ACA+IG L GK IH + +R F+ L
Sbjct: 479 NNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY +CG A F+ Q +D+ +WN+++ Y G + A+ LF +M+E +
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF SLL A S SG+V EG +F++M +KY + P KHYAC+VD+L RAG++++A
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M P A+W ALL+ C H+ +GE AK+V + + +G + L+ N +A
Sbjct: 657 DFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCG 716
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W++V+ VR MR+ G+ PG S VE+ G++HAF+ D SH+Q ++I VL +M+
Sbjct: 717 NWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 253/484 (52%), Gaps = 18/484 (3%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ + +G +++ A +F ++ R V ++N ++ Y++ E L LY++M+
Sbjct: 135 GNALLSMFVRFG---NLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
++RP+ TF LK C + D+ G+EI + G+ +DV VG++++ +YVKCG ++
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F+KM ++D + W++MI+G NG E ++ + M++ +D D + M + AC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + R G VHGY ++ D+ + SL+ MY+ G L+ A VF M ++V+W A+
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I+ + L +E M+ G PD ++LVS L ACA IG L LG +H ++
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++++ S+IDMYSKC A +F + ++++SW +I I+ EAL F Q
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLL 424
M E+M KP+ T S+LSA + G + G+ + V P ++D+
Sbjct: 492 MKESM-KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA-----ILDMY 545
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGI 482
R G AL +S + + W LL+G + + ++ K+L+L +PD++
Sbjct: 546 VRCGRKVPALNQFNSQKKD--VTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITF 603
Query: 483 HALV 486
+L+
Sbjct: 604 ISLL 607
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 183/354 (51%), Gaps = 4/354 (1%)
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
V +G+++L+++V+ G + +A F KM +D+ W+ ++ G G EA++ Y RM
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
I + +++ CA + D G +H + IR DV V +L+ MY K G +
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A +F M + + ++W A+ISG+ +NG LEL M+ +PD +++ + AC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 291 IGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+ +LG+ +HGY V+ F ++ + S+I MYS G A +F +M+S+D++SW +
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IAS H +A+ + M + PD T S+LSA + G ++ G ++ +
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH-NHKKF 462
+ + ++D+ ++ V+ AL++ ++S + + W +L+ G N++ F
Sbjct: 432 VSHVIVSNS-LIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRSF 483
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 3/310 (0%)
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
L G +A+ + M + I+ +E + L++ C G V+ L
Sbjct: 72 LCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLC 131
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V++ +L+ M+ + G+L A +VF MS ++ +W L+ G+A+ G L L M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
P+ + S L CA + + GK IH + +R F+ ++ +G ++I MY KCG S
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR LFD+M RD ISWN +I+ Y +G G E L LF M E V PD T ++ SA
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
GR +V K + ++ + + G +EEA + M ++ + W
Sbjct: 312 LDNERLGRGVHGYVV-KSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKD-VVSWT 369
Query: 451 ALLSGCHNHK 460
A+++ +HK
Sbjct: 370 AMIASLVSHK 379
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 317/532 (59%), Gaps = 1/532 (0%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
+D R LF ++ + +N++I + + + Y M E P++ TF L
Sbjct: 60 SDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVL 119
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KAC L+DL++G +I V+ G+ DVFV +S++ LY KCG + +A F+ + K++V
Sbjct: 120 KACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVV 179
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W+++I+G + G+ REA+D ++R+ + + D ++ ++ AC LGD G +H
Sbjct: 180 SWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI 239
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ + +V V TSLVDMYAK G+++ A VF M +IV+WGA+I G+A NGL +
Sbjct: 240 MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAI 299
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
+L ++MQ +PD ++V L ACA++G L+LG+ + G R F +N VLGT++ID+Y
Sbjct: 300 DLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLY 359
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+KCG S A +F M+ +D + WN II+ ++G+ + + LF Q+ + +KPD +TF
Sbjct: 360 AKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFI 419
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
LL +H+GLV+EGR +F+ M + + P+ +HY CMVDLL RAG ++EA +++ +M
Sbjct: 420 GLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPM 479
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
E VW ALL C H+ + E K++++L P + G + L+SN ++ KW+E A V
Sbjct: 480 EANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKV 539
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
R +M + ++K PG S +EV+G +H F++ DK H E I L +L +M+
Sbjct: 540 RLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMK 591
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 197/369 (53%), Gaps = 9/369 (2%)
Query: 117 MLNLYVKCG----KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+LN+ ++C N F ++++ ++ W++MI GLV N +A++ Y M+ EG
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ +++ACA L D + G+ +H ++ + DV V+TSLV +YAK G+L+ A
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH 167
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF ++ N+V+W A+ISG+ G +++ + PDS ++V L AC Q+G
Sbjct: 168 KVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLG 227
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L G+ IH + N+ +GTS++DMY+KCG AR++FD M +D++SW +I
Sbjct: 228 DLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQ 287
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y ++G +EA+ LFLQM VKPD T +LSA + G +E G W +V + +
Sbjct: 288 GYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE-WVSGLVDRNEFL 346
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVA 469
++DL A+ G + A ++ M E VW A++SG + + K S G
Sbjct: 347 YNPVLGTALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKISFGLFGQ 405
Query: 470 KKVLKLNPD 478
+ L + PD
Sbjct: 406 VEKLGIKPD 414
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 193/381 (50%), Gaps = 5/381 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + A K+F+++P + V ++ +II Y E + ++ ++++ ++ PD
Sbjct: 153 LVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC L DL GE I + +E+G +VFVG+S++++Y KCG M +A F+
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 272
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+V W +MI G NG P+EA+D + +M++E + D ++G++ ACA LG
Sbjct: 273 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALEL 332
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G V G R + + T+L+D+YAK G + A VFK M + V W A+ISG A
Sbjct: 333 GEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAM 392
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG + L +++ G +PD + + L C G + G+ R F +
Sbjct: 393 NGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIE 452
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++D+ + G+ A L M + I W ++ + IH + A Q+IE
Sbjct: 453 HYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE- 511
Query: 373 MVKPDHSTFASLLSALSHSGL 393
++P +S LLS + + L
Sbjct: 512 -LEPWNSGNYVLLSNIYSANL 531
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/571 (35%), Positives = 332/571 (58%), Gaps = 8/571 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + A K+F ++P++ V ++N++I + + + LG+ N+M E V+ D
Sbjct: 162 LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T L C D+ G I ++ G +DVFV ++++N+Y K G++ +A + F+
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD 281
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ +DLV W+S+I N P A+ +K M+ GI D + ++ L + L D R
Sbjct: 282 QMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRI 341
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
S+ G+ IRR L+ DV + +LV+MYAK G+++ A VF + R + ++W L++G+
Sbjct: 342 SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT 401
Query: 255 QNGLAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNGLA ++ M+ C P+ + VS + A + +G L+ G IH ++ ++
Sbjct: 402 QNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV 461
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T +ID+Y KCG A +LF ++ + WN IIAS GIHG GEEAL LF M+
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK DH TF SLLSA SHSGLV+EG+ FD+M +Y I+P+ KHY CMVDLL RAG +E+
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEK 581
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++V +M +P ++W ALLS C + +G + ++L+++ +++G + L+SN +A
Sbjct: 582 AYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+KWE V VR R G++K PG+S V V + F +++H +Y +I LK L +
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAK 701
Query: 553 MRAIS-----SWLQGHMEEHEEHDPLSTAAQ 578
M+++ S++ +EE E+ L++ ++
Sbjct: 702 MKSLGYVPDYSFVYQDIEEDEKEQILNSHSE 732
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 244/464 (52%), Gaps = 32/464 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK----E 70
++I LY DI +R F+ + + + ++NSII AY R E + NQ+
Sbjct: 59 KLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGG 118
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+RPD TF LKACVSL+D G+++ ++G+ +DVFV +S+++LY + G ++ A
Sbjct: 119 HLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVA 175
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M KD+ W++MI+G NG A+ RMK EG+ D + + ++ CA
Sbjct: 176 HKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G+ +H + ++ L+ DV V +L++MY+K G L A VF M ++V+W ++I
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--F 308
+ + QN + L MQ G PD +++VS +Q+ ++ +SI G+ +RR
Sbjct: 296 AAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWL 355
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D ++V+G ++++MY+K G +CA +FDQ+ +D ISWN ++ Y +G EA+ +
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 369 MIETM-VKPDHSTFASLLSALSHSGLVEEG----------RYWFDLMVSKYKIQPTEKHY 417
M E P+ T+ S++ A SH G +++G + D+ V+
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA----------- 464
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
C++DL + G +E+A+ + + + + W A+++ H +
Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGR 507
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 9/356 (2%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
G ++ + + ++NLYV G ++ + F+ + +K++ W+S+I+ V G+ EA++
Sbjct: 48 FGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNC 107
Query: 165 YKRMKKEG----IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
++ + D +++AC L D G VH + DV V SLV
Sbjct: 108 VNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVH 164
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+Y++ G LD+A VF +M ++ +W A+ISGF QNG A L +L M+ G + D+++
Sbjct: 165 LYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTIT 224
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
+ S L CAQ + G IH + ++ D ++ + ++I+MYSK G A+ +FDQM+
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
RDL+SWN IIA+Y + AL F M ++PD T SL S S R
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + + +V++ A+ G + A + D + + ++ W L++G
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS-WNTLVTG 399
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+VL T +I++Y G S +R+ FD + +++ SWN II++Y G EA++ Q+
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLF 112
Query: 371 ETM----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++PD TF +L A LV+ + V K + A +V L +R
Sbjct: 113 SMCGGGHLRPDFYTFPPILKAC--VSLVDGKK--VHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSG-CHN 458
G ++ A K+ M + + W A++SG C N
Sbjct: 169 YGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQN 200
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 319/565 (56%), Gaps = 7/565 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y +V A++LF + R V +N++I S + + L QM +E + P+
Sbjct: 150 LVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
SST L L G+ + V + N V VG+ +L++Y KC + A F+
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSR 194
M ++ V WS+MI G V + +EA++ + +M K+ +D V + +++ACA L D
Sbjct: 270 VMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y I+ LD+ + +L+ MYAK G +D A F M+ + V++ A++SG
Sbjct: 330 RGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCV 389
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLV 313
QNG A L + MQ G +PD +++ L AC+ + L+ G HGY VR F + +
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++IDMYSKCG S AR +F++M D++SWN +I YGIHG G EAL LF ++
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD TF LLS+ SHSGLV EGR WFD M + I P +H CMVD+L RAG ++EA
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA 569
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ +M EP + +W ALLS C HK +GE+V+KK+ L P+ G L+SN ++
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAA 629
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W++ A +R T + G+KK+PG S +E+NG +HAF+ D+SH Q I L++L +EM
Sbjct: 630 GRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEM 689
Query: 554 R-----AISSWLQGHMEEHEEHDPL 573
+ A S++ +EE E+ L
Sbjct: 690 KRLGYQAECSFVFQDVEEEEKEQIL 714
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 255/493 (51%), Gaps = 8/493 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE- 59
+K +A + + ++ LY N +V AR+LF+E+P V +N II AY+ PF+
Sbjct: 34 FLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN-GPFDG 92
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ LY+ M+ VRP+ T+ LKAC L+ ++ G EI A G +DVFV +++++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG + EA F M +D+V W++MI G G +AV +M++EGI +
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++G++ + G ++HGY +RR + V V T L+DMYAK L A +F M
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N V+W A+I G+ + LEL +M +P V+L S L ACA++ L G+
Sbjct: 273 VRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y ++ +++LG +++ MY+KCGV A FD M +D +S++ I++ +G
Sbjct: 333 KLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNG 392
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+ ALS+F M + + PD +T +L A SH ++ G ++ + T
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLKL 475
A ++D+ ++ G++ A ++ + M + W A++ G H ++G L L
Sbjct: 453 A-LIDMYSKCGKISFAREVFNRMDRHD-IVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 476 NPDDLGIHALVSN 488
PDD+ L+S+
Sbjct: 511 KPDDITFICLLSS 523
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 215/419 (51%), Gaps = 9/419 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+AC+ L ++I + ++ D V + LY+ C ++ A F+++ +
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+ +I +NG A+D Y M G+ ++ +++AC+ L G+ +H +
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ L DV V T+LVD YAK G L A +F +MS ++V W A+I+G + GL
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
++L+M+MQ G P+S ++V L + L GK++HGY VRR FD +V+GT ++DM
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDM 254
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHST 380
Y+KC AR +FD M R+ +SW+ +I Y +EAL LF QMI + + P T
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVT 314
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+L A + + GR ++ + ++ + A+ G +++A++ D M
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT-LLSMYAKCGVIDDAIRFFDXM 373
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAK--KVLKLNPD---DLGIHALVSNFFAMEQ 494
+ + ++ + A++SGC + ++ + + ++ ++PD LG+ S+ A++
Sbjct: 374 NPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 431
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++AC +H + ++ N D V L +Y + LA +F + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++ W +I +A NG ++L M G P+ + L AC+ + ++ G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 303 YT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ + + ++ + T+++D Y+KCG+ A+ LF M RD+++WN +IA ++G ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A+ L +QM E + P+ ST +L + + + G+ V + ++
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG-LL 252
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
D+ A+ + A KI D M ++ W A++ G
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGG 285
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 326/550 (59%), Gaps = 2/550 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+N A +IA+Y + A ++FE + R ++N+++ + E +
Sbjct: 274 VLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDA 333
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + M +PD + + A +L G+E+ A+ G +++ +G++++++
Sbjct: 334 LNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDM 393
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + AFE M KDL+ W+++I G N EA++ +++++ +G+D D +++
Sbjct: 394 YAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMI 453
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++AC+ L F +HGY +R L D+ +Q ++V++Y + GH+D A F+++
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRS 512
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV+W ++I+ NGL LEL ++ +PDS++++SAL A A + LK GK I
Sbjct: 513 KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ +R+ F + +S++DMY+ CG +R +F ++ RDLI W +I + G+HG G
Sbjct: 573 HGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCG 632
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+A++LF +M + V PDH TF +LL A SHSGL+ EG+ +F++M Y+++P +HYAC
Sbjct: 633 NKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYAC 692
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL+R+ +EEA V +M +P +W ALL CH H +GE AK++L+ + ++
Sbjct: 693 MVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTEN 752
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G +AL+SN FA + +W +V VR M+ +G+KK PG S +EV+ ++H F+ DKSH Q
Sbjct: 753 SGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQT 812
Query: 540 EDIVYVLKKL 549
+DI L +
Sbjct: 813 DDIYLKLAQF 822
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 261/496 (52%), Gaps = 18/496 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K++LSA+ + +++ +YG + A K+F+E+ R + ++N+++ A+ E
Sbjct: 72 LLKSHLSAFLAT--KLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEA 129
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ LY M V D+ TF LKAC +L + ++G EI AV+ GYG VFV ++++ +
Sbjct: 130 IELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAM 189
Query: 121 YVKCGKMNEAMVAFEK--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y KCG + A V F+ M+++D V W+S+I+ V G EA+ ++RM++ G+ ++
Sbjct: 190 YGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTY 249
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ +Q D + G+ +HG ++ + DV V +L+ MYAK G ++ A VF++M
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM 309
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ V+W L+SG QN L L +MQ+ G +PD VS+++ + A + G L GK
Sbjct: 310 LCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGK 369
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y +R D N+ +G +++DMY+KC F+ M +DLISW IIA Y +
Sbjct: 370 EVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNE 429
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSAL----SHSGLVEEGRYWFDLMVSKYKIQPT 413
EA++LF ++ + D S+L A S + + E Y F ++ +Q
Sbjct: 430 FHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNA 489
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC-HNHKKFSIGEKV-AKK 471
+V++ G ++ A + +S+ ++ + W ++++ C HN E + K
Sbjct: 490 ------IVNVYGEVGHIDYARRAFESIRSKD-IVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 472 VLKLNPDDLGIHALVS 487
+ PD + I + +S
Sbjct: 543 QTNIQPDSIAIISALS 558
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 259/480 (53%), Gaps = 16/480 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+IA+YG D+ AR LF+ + + DT +NSII A+ + + E L L+ +M + V
Sbjct: 186 LIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVA 245
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ TF AL+ +K+G I ++ + DV+V ++++ +Y KCG+M +A
Sbjct: 246 SNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRV 305
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE M +D V W+++++GLV N +A++ ++ M+ G D+V ++ LI A G+
Sbjct: 306 FESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNL 365
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH Y+IR L+ ++++ +LVDMYAK + H F+ M ++++W +I+G+
Sbjct: 366 LKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGY 425
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQN + L ++Q G + D + + S L AC+ + + IHGY +R +++
Sbjct: 426 AQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM 485
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L +++++Y + G AR F+ ++S+D++SW +I +G EAL LF + +T
Sbjct: 486 LQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN 545
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK--YKIQPTEKHYACMVDLLARAGEVE 431
++PD S LSA ++ +++G+ ++ K + P + +VD+ A G VE
Sbjct: 546 IQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVE 602
Query: 432 EALKIVDSMSTEPGLAVWVALLS-----GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ K+ S+ + L +W ++++ GC N K ++ +K+ + + PD + AL+
Sbjct: 603 NSRKMFHSVK-QRDLILWTSMINANGMHGCGN-KAIALFKKMTDQ--NVIPDHITFLALL 658
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 167/322 (51%), Gaps = 5/322 (1%)
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
++ L CV+ L G+++ A+ L F+ + ++ +Y KCG + +A+ F++M
Sbjct: 50 SLLLDLCVAAKALPQGQQL--HALLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSE 107
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+ + W++++ V +G+ EA++ YK M+ G+ D +++AC LG+SR G +
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNG 257
HG +++ V V +L+ MY K G L A +F M + + V+W ++IS G
Sbjct: 168 HGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEG 227
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGT 316
L L MQ G ++ + V+AL F+KLG IHG ++ F ++ +
Sbjct: 228 NCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVAN 287
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++I MY+KCG A +F+ M RD +SWN +++ + +AL+ F M + KP
Sbjct: 288 ALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP 347
Query: 377 DHSTFASLLSALSHSGLVEEGR 398
D + +L++A SG + +G+
Sbjct: 348 DQVSVLNLIAASGRSGNLLKGK 369
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 313/578 (54%), Gaps = 8/578 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A++LF L R + +++II A + P E L L+ +M + ++P+
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L LK+G+ I V+ +D+ G++++++Y KCG A+ F
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D+V W+S+ING G P A+D + +++ I+ D M+G++ ACA L D
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFA 254
G +HG ++ D V+ +L+DMYAK G L A +F + VTW +I+ +
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG A + +M+ F P+SV+ VS L A A + + G + H ++ F N +
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL 669
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G S+IDMY+KCG + LF++M +D +SWN +++ Y +HGHG+ A++LF M E+
Sbjct: 670 VGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 729
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+ D +F S+LSA H+GLVEEGR F M KY I+P +HYACMVDLL RAG +E
Sbjct: 730 VQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDET 789
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L + M EP VW ALL C H +GE ++KL P + ++S+ +A
Sbjct: 790 LGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS 849
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W + R M G+KK PG S VE+ ++HAF + DKSH Q E + + L +M
Sbjct: 850 GRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKM 909
Query: 554 RAI------SSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
I S LQ EE +E S + + A T+ L
Sbjct: 910 EKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFAL 947
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 245/450 (54%), Gaps = 13/450 (2%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
+S+ +I LY + AR +F+ P +NS+I AY+R + E L +Y M+++
Sbjct: 64 HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEK 123
Query: 71 DVRPDSSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ PD TFT LKAC ++L+ G EI R+ +E DVF+G+ ++++Y K G
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE----RDVFIGAGLVDMYSKMGD 179
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ A F+KM ++D+V W++MI GL + P EAVD ++ M+ G++ V ++ L
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
L + S+HGY RR + V L+D+Y+K G +D+A VF M + V+W
Sbjct: 240 ICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV- 305
G +++G+A NG LEL +M+ + VS VSA LA A+ L+ GK IHG +
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+R D ++++ T ++ MY+KCG A+ LF +Q RDL++W+ IIA+ G+ EEALSL
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSL 417
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M +KP+ T S+L A + L++ G+ V K + +V + A
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV-KADMDSDLSTGTALVSMYA 476
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G AL + MS+ + W +L++G
Sbjct: 477 KCGFFTAALTTFNRMSSR-DIVTWNSLING 505
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 253/454 (55%), Gaps = 6/454 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY D+ AR++F+++ + ++ +++ Y+ EVL L+++M +VR +
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A A +DL+ G+EI A++ +D+ V + ++ +Y KCG+ +A F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q +DLV WS++I LV G P EA+ ++ M+ + + + V +M ++ ACADL +
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H ++++ ++ D+ T+LV MYAK G A F MS +IVTW +LI+G+AQ
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + +++ +++ PD+ ++V + ACA + L G IHG V+ F+ + +
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
++IDMY+KCG A LF++ ++D ++WNVIIA+Y +GH +EA+S F QM
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
P+ TF S+L A ++ EG + ++ + T + ++D+ A+ G+++ +
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS-LIDMYAKCGQLDYS 687
Query: 434 LKIVDSMSTEPGLAVWVALLSG--CHNHKKFSIG 465
K+ + M + ++ W A+LSG H H +I
Sbjct: 688 EKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRAIA 720
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 217/419 (51%), Gaps = 4/419 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+ AR++F+++P R V +N++I S+ E P E + + M V P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + L ++++ I + + V G +++LY KCG ++ A F+
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFD 287
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D V W +M+ G NG E ++ + +MK + ++V + A A+ D
Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++++ ++ D+ V T L+ MYAK G + A +F + ++V W A+I+ Q
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G L L EMQ+ +P+ V+L+S L ACA + LKLGKSIH +TV+ D +L
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
GT+++ MY+KCG + A F++M SRD+++WN +I Y G A+ +F ++ + +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD T ++ A + +++G L+V K + ++D+ A+ G + A
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPSA 585
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 217/476 (45%), Gaps = 52/476 (10%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K ++ + ++ ++++Y +A F + R + T+NS+I Y++ P+ +
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ ++ + PD+ T + AC L DL G I V+LG+ +D V ++++++Y
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 122 VKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
KCG + A F K KD V W+ +I + NG +EA+ ++ +M+ E + V
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ A A L R G++ H I+ + V SL+DMYAK G LD + +F M
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 696
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V+W A++SG+A +G + L MQ + DSVS VS L AC G ++ G+ I
Sbjct: 697 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 756
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
++ +L ++D+ + G LFD+
Sbjct: 757 FHSMSDKYHIKPDLEHYACMVDLLGRAG-------LFDET-------------------- 789
Query: 359 GEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKH 416
L I+ M V+PD + +LL + V+ G D +V K++P H
Sbjct: 790 --------LGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV---KLEPRNPAH 838
Query: 417 YACMVDLLARAGEVEEALKIVDSMS-----TEPGLAVWVALLSGCHNHKKFSIGEK 467
+ + + A++G +A K M+ PG + WV L + H F +G+K
Sbjct: 839 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS-WVELKNKVH---AFRVGDK 890
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 301/535 (56%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I R++F E+P+R V ++ +II R E L +++M + V D
Sbjct: 157 LLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYD 216
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF +ALKAC L G EI +A++ G+ FV +++ +Y KCGK+ + FE
Sbjct: 217 SYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFE 276
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM +D+V W+++I LV GQ AV A+ RM++ + +E +I CA+L +
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 336
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + L + V+ S++ MYAK G L +S +F M+R +IV+W +I+G++Q
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ 396
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G ELL M+ G +P +L S L AC + L+ GK +H Y + + ++
Sbjct: 397 GGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMV 456
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++I+MY KCG A +FD ++ D++SW +I Y HG+ E + LF ++ +
Sbjct: 457 LSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGL 516
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD TF +LSA SH+GLV+ G +F+ M KY+I P+++HY CM+DLL RAG + +A
Sbjct: 517 RPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAE 576
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++++M VW LL C H G + A+++L+L P+ G H ++N +A +
Sbjct: 577 HMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKG 636
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW E A +RK M+ G+ K PG+S ++V + AF+ D+SH Q EDI +L L
Sbjct: 637 KWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 238/466 (51%), Gaps = 10/466 (2%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALKAC 86
+AR++F+++ + ++ ++I Y E L L+ M ++ +R D ++A KAC
Sbjct: 67 NARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKAC 126
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
D+ GE + AV+ G N VFVGS++L++Y K GK+ E F +M +++V W+
Sbjct: 127 GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 186
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++I GLV G +EA+ + M + ++ D ++ACAD G +G +H ++++
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++ V +L MY K G L+ +F+ MS ++V+W +I+ Q G ++
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+ M+ P+ + + + CA + ++ G+ +H + +L + S++ MY+KC
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + + +F +M RD++SW+ IIA Y GH EA L M KP AS+L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA + ++E G+ ++S ++ T + ++++ + G +EEA +I D+ +
Sbjct: 427 SACGNMAILEHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDD- 484
Query: 446 LAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALVS 487
+ W A+++G H + + EK+ + + L PD + ++S
Sbjct: 485 IVSWTAMINGYAEHGYSREVIDLFEKIPR--VGLRPDSVTFIGVLS 528
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 184/377 (48%), Gaps = 4/377 (1%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
VA C+ L L+ + + + D+ + L VK G + A F+KM +K
Sbjct: 19 VASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQK 78
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSV 199
D + W+++I+G V EA+ +K M+ E G+ D ++ +AC D +G +
Sbjct: 79 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HGY+++ L V V ++L+DMY K G + VF M N+V+W A+I+G + G
Sbjct: 139 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 198
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L EM E DS + AL ACA G L G+ IH +++ FD + + ++
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
MY+KCG LF++M RD++SW II + G E A+ F++M E+ V P+
Sbjct: 259 ATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 318
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TFA+++S ++ +E G L++ + + ++ + A+ G++ + I
Sbjct: 319 YTFAAVISGCANLARIEWGEQLHALIL-HLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 439 SMSTEPGLAVWVALLSG 455
M T + W +++G
Sbjct: 378 EM-TRRDIVSWSTIIAG 393
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 309/542 (57%), Gaps = 2/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+++Y + A ++F+ + R V ++ ++I +++ E +N+MI+ + P+
Sbjct: 353 ILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPN 412
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC S LK G++I +E GYG+D V +++L++Y KCG + +A FE
Sbjct: 413 RVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFE 472
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ ++++V W++MI V + Q A+ ++ + KEGI + ++ C
Sbjct: 473 KISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLEL 532
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH ++ L D+ V +LV M+ G L A ++F +M + ++V+W +I+GF Q
Sbjct: 533 GKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G + MQ G +PD ++ L ACA L G+ +H T FD ++++
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
GT +I MY+KCG A +F ++ +++ SW +IA Y HG G+EAL LF QM + V
Sbjct: 653 GTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGV 712
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF LSA +H+GL+EEG + F M ++ I+P +HY CMVDL RAG + EA+
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAV 771
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M EP VW ALL C H + EK A+K L+L+P+D G+ ++SN +A
Sbjct: 772 EFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAG 831
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W+EVA +RK M G+ K PG S +EV+G++H F +DK+H Q E+I L++L++EMR
Sbjct: 832 MWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR 891
Query: 555 AI 556
+
Sbjct: 892 QL 893
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 256/475 (53%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + +SA+++F+++ + V ++N ++ Y + E L+ QM+++ V+PD
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC ++ G E++ ++ G+ D+FVG++++N+++KCG + +A F+
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +DLV W+SMI GL +G+ ++A + ++RM++EG+ D+V + L++AC
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + ++ V T+++ MY K G ++ A VF + N+V+W A+I+GFAQ
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G +M G EP+ V+ +S L AC+ LK G+ I + + + + +
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++ MY+KCG A +F+++ +++++WN +I +Y H + AL+ F +++ +
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ STF S+L+ S +E G+ W ++ K ++ +V + G++ A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ + M L W +++G H K + K + + + PD + L++
Sbjct: 570 NLFNDMPKRD-LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 226/421 (53%), Gaps = 10/421 (2%)
Query: 62 GLYNQMIKEDVRPDSS-------TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
G +N+ ++ R DSS T++ L+ C+ +L GE I+ + G D+F+
Sbjct: 89 GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMR 148
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
++++N+Y KCG A F+ M+ KD+ W+ ++ G V +G EA +++M ++ +
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D+ + ++ ACAD + G ++ ++ + D+ V T+L++M+ K G + A+ V
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F N+ ++VTW ++I+G A++G L M+ G +PD V+ VS L AC L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK +H +D + +GT+++ MY+KCG A +FD ++ R+++SW +IA +
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
HG +EA F +MIE+ ++P+ TF S+L A S ++ G+ D ++ +
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSD 447
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
++ ++ + A+ G +++A ++ + +S + + W A+++ H+++ + +L
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALL 506
Query: 474 K 474
K
Sbjct: 507 K 507
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 165/324 (50%), Gaps = 5/324 (1%)
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
KD ++++N L GQ EA+ +R+ I L+Q C + G +
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
+ + + + D+ ++ +L++MYAK G+ A +F +M ++ +W L+ G+ Q+GL
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
+L +M +PD + VS L ACA + G+ ++ ++ +D +L +GT++
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
I+M+ KCG A +FD + +RDL++W +I HG ++A +LF +M E V+PD
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIV 437
F SLL A +H +E+G+ M K TE + ++ + + G +E+AL++
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARM--KEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 438 DSMSTEPGLAVWVALLSGCHNHKK 461
D + + W A+++G H +
Sbjct: 371 DLVKGR-NVVSWTAMIAGFAQHGR 393
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 312/578 (53%), Gaps = 8/578 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A++LF L R + +++II A + P E L L+ +M + ++P+
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L LK+G+ I V+ +D+ G++++++Y KCG A+ F
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D+V W+S+ING G P A+D + +++ I+ D M+G++ ACA L D
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFA 254
G +HG ++ D V+ +L+DMYAK G L A +F + VTW +I+ +
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG A + +M+ F P+SV+ VS L A A + + G + H ++ F N +
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL 669
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G S+IDMY+KCG + LF++M +D +SWN +++ Y +HGHG+ A++LF M E+
Sbjct: 670 VGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 729
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+ D +F S+LSA H GLVEEGR F M KY I+P +HYACMVDLL RAG +E
Sbjct: 730 VQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDET 789
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L + M EP VW ALL C H +GE ++KL P + ++S+ +A
Sbjct: 790 LGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS 849
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W + R M G+KK PG S VE+ ++HAF + DKSH Q E + + L +M
Sbjct: 850 GRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKM 909
Query: 554 RAI------SSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
I S LQ EE +E S + + A T+ L
Sbjct: 910 EKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFAL 947
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 245/450 (54%), Gaps = 13/450 (2%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
+S+ +I LY + AR +F+ P +NS+I AY+R + E L +Y M+++
Sbjct: 64 HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEK 123
Query: 71 DVRPDSSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ PD TFT LKAC ++L+ G EI R+ +E DVF+G+ ++++Y K G
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE----RDVFIGAGLVDMYSKMGD 179
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ A F+KM ++D+V W++MI GL + P EAVD ++ M+ G++ V ++ L
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
L + S+HGY RR + V L+D+Y+K G +D+A VF M + V+W
Sbjct: 240 ICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV- 305
G +++G+A NG LEL +M+ + VS VSA LA A+ L+ GK IHG +
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+R D ++++ T ++ MY+KCG A+ LF +Q RDL++W+ IIA+ G+ EEALSL
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSL 417
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M +KP+ T S+L A + L++ G+ V K + +V + A
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV-KADMDSDLSTGTALVSMYA 476
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G AL + MS+ + W +L++G
Sbjct: 477 KCGFFTAALTTFNRMSSR-DIVTWNSLING 505
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 252/454 (55%), Gaps = 6/454 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY D+ AR++F+++ + ++ +++ Y+ EVL L+++M +VR +
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A A +DL+ G+EI A++ +D+ V + ++ +Y KCG+ +A F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q +DLV WS++I LV G P EA+ ++ M+ + + + V +M ++ ACADL +
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H ++++ ++ D+ T+LV MYAK G A F MS +IVTW +LI+G+AQ
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + +++ +++ PD+ ++V + ACA + L G IHG V+ F+ + +
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
++IDMY+KCG A LF++ ++D ++WNVIIA+Y +GH +EA+S F QM
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
P+ TF S+L A ++ EG + ++ + T + ++D+ A+ G++ +
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS-LIDMYAKCGQLXYS 687
Query: 434 LKIVDSMSTEPGLAVWVALLSG--CHNHKKFSIG 465
K+ + M + ++ W A+LSG H H +I
Sbjct: 688 EKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRAIA 720
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 217/419 (51%), Gaps = 4/419 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+ AR++F+++P R V +N++I S+ E P E + + M V P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + L ++++ I + + V G +++LY KCG ++ A F+
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFD 287
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D V W +M+ G NG E ++ + +MK + ++V + A A+ D
Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++++ ++ D+ V T L+ MYAK G + A +F + ++V W A+I+ Q
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G L L EMQ+ +P+ V+L+S L ACA + LKLGKSIH +TV+ D +L
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
GT+++ MY+KCG + A F++M SRD+++WN +I Y G A+ +F ++ + +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD T ++ A + +++G L+V K + ++D+ A+ G + A
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPSA 585
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 216/476 (45%), Gaps = 52/476 (10%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K ++ + ++ ++++Y +A F + R + T+NS+I Y++ P+ +
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ ++ + PD+ T + AC L DL G I V+LG+ +D V ++++++Y
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 122 VKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
KCG + A F K KD V W+ +I + NG +EA+ ++ +M+ E + V
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ A A L R G++ H I+ + V SL+DMYAK G L + +F M
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDH 696
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V+W A++SG+A +G + L MQ + DSVS VS L AC G ++ G+ I
Sbjct: 697 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKI 756
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
++ +L ++D+ + G LFD+
Sbjct: 757 FHSMSDKYHIKPDLEHYACMVDLLGRAG-------LFDET-------------------- 789
Query: 359 GEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKH 416
L I+ M V+PD + +LL + V+ G D +V K++P H
Sbjct: 790 --------LGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV---KLEPRNPAH 838
Query: 417 YACMVDLLARAGEVEEALKIVDSMS-----TEPGLAVWVALLSGCHNHKKFSIGEK 467
+ + + A++G +A K M+ PG + WV L + H F +G+K
Sbjct: 839 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS-WVELKNKVH---AFRVGDK 890
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 308/558 (55%), Gaps = 41/558 (7%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE- 59
+K +A + + ++ LY N +V AR+LF+E+P V +N II AY+ PF+
Sbjct: 34 FLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN-GPFDG 92
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ LY+ M+ VRP+ T+ LKAC L+ ++ G EI A G +DVFV +++++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG + EA F M +D+V W++MI G G +AV +M++EGI +
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++G++ C L +YA+ +F M
Sbjct: 213 IVGVLPTCQCL------------------------------LYARK--------IFDVMG 234
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N V+W A+I G+ + L++ MQ G +PD +++ L AC+ + L+ G
Sbjct: 235 VRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 294
Query: 300 IHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
HGY VR F + ++ ++IDMYSKCG S AR +F++M D++SWN +I YGIHG
Sbjct: 295 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 354
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G EAL LF ++ +KPD TF LLS+ SHSGLV EGR WFD M + I P +H
Sbjct: 355 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 414
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVD+L RAG ++EA + +M EP + +W ALLS C HK +GE+V+KK+ L P+
Sbjct: 415 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 474
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
G L+SN ++ +W++ A +R T + G+KK+PG S +E+NG +HAF+ D+SH Q
Sbjct: 475 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 534
Query: 539 YEDIVYVLKKLYLEMRAI 556
I L++L +EM+ +
Sbjct: 535 LSQINRKLEELLVEMKRL 552
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 183/408 (44%), Gaps = 41/408 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+AC+ L ++I + ++ D V + LY+ C ++ A F+++ +
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+ +I +NG A+D Y M G+ ++ +++AC+ L G+ +H +
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ L DV V T+LVD YAK G L A +F +MS ++V W A+I+G + GL
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMY 322
++L+M+MQ G P+S ++V L C + +
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTCQCLLY----------------------------- 225
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
AR +FD M R+ +SW+ +I Y +EAL +F M + + PD +T
Sbjct: 226 --------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTML 277
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
+L A SH ++ G ++ + T A ++D+ ++ G++ A ++ + M
Sbjct: 278 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNA-LIDMYSKCGKISFAREVFNRMDR 336
Query: 443 EPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+ W A++ G H ++G L L PDD+ L+S+
Sbjct: 337 H-DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 383
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 12/278 (4%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++AC +H + ++ N D V L +Y + LA +F + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++ W +I +A NG ++L M G P+ + L AC+ + ++ G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 303 YT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ + + ++ + T+++D Y+KCG+ A+ LF M RD+++WN +IA ++G ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A+ L +QM E + P+ ST +L + R FD+M + E ++ M+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTCQ---CLLYARKIFDVMGVR-----NEVSWSAMI 245
Query: 422 DLLARAGEVEEALKIVDSMS---TEPGLAVWVALLSGC 456
+ ++EAL I M +P L + +L C
Sbjct: 246 GGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPAC 283
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 319/565 (56%), Gaps = 7/565 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y +V A++LF + R V +N++I S + + L QM +E + P+
Sbjct: 150 LVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
SST L L G+ + V + N V VG+ +L++Y KC + A F+
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSR 194
M ++ V WS+MI G V + +EA++ + +M K+ +D V + +++ACA L D
Sbjct: 270 VMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y I+ LD+ + +L+ MYAK G +D A F M+ + V++ A++SG
Sbjct: 330 RGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCV 389
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLV 313
QNG A L + MQ G +PD +++ L AC+ + L+ G HGY VR F + +
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++IDMYSKCG S AR +F++M D++SWN +I YGIHG G EAL LF ++
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD TF LLS+ SHSGLV EGR WFD M + I P +H CMVD+L RAG ++EA
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA 569
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ +M EP + +W ALLS C HK +GE+V+KK+ L P+ G L+SN ++
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAA 629
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W++ A +R T + G+KK+PG S +E+NG +HAF+ D+SH Q I L++L +EM
Sbjct: 630 GRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEM 689
Query: 554 R-----AISSWLQGHMEEHEEHDPL 573
+ A S++ +EE E+ L
Sbjct: 690 KRLGYQAECSFVFQDVEEEEKEQIL 714
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 256/493 (51%), Gaps = 8/493 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE- 59
+K +A + + ++ LY N +V AR+LF+E+P V +N II AY+ PF+
Sbjct: 34 FLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN-GPFDG 92
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ LY+ M+ VRP+ T+ LKAC L+ ++ G EI A G +DVFV +++++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG + EA F M +D+V W++MI G G +AV +M++EGI +
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++G++ + G ++HGY +RR + V V T L+DMYAK L A +F M
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N V+W A+I G+ + LEL +M +P V+L S L ACA++ L G+
Sbjct: 273 VRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 299 SIHGYTVRRFD-FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y ++ +++LG +++ MY+KCGV A FD+M +D +S++ I++ +G
Sbjct: 333 KLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNG 392
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+ ALS+F M + + PD +T +L A SH ++ G ++ + T
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLKL 475
A ++D+ ++ G++ A ++ + M + W A++ G H ++G L L
Sbjct: 453 A-LIDMYSKCGKISFAREVFNRMDRHD-IVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 476 NPDDLGIHALVSN 488
PDD+ L+S+
Sbjct: 511 KPDDITFICLLSS 523
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 215/419 (51%), Gaps = 9/419 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+AC+ L ++I + ++ D V + LY+ C ++ A F+++ +
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+ +I +NG A+D Y M G+ ++ +++AC+ L G+ +H +
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ L DV V T+LVD YAK G L A +F +MS ++V W A+I+G + GL
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
++L+M+MQ G P+S ++V L + L GK++HGY VRR FD +V+GT ++DM
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDM 254
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHST 380
Y+KC AR +FD M R+ +SW+ +I Y +EAL LF QMI + + P T
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVT 314
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+L A + + GR ++ + ++ + A+ G +++A++ D M
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT-LLSMYAKCGVIDDAIRFFDEM 373
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAK--KVLKLNPD---DLGIHALVSNFFAMEQ 494
+ + ++ + A++SGC + ++ + + ++ ++PD LG+ S+ A++
Sbjct: 374 NPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 431
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++AC +H + ++ N D V L +Y + LA +F + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++ W +I +A NG ++L M G P+ + L AC+ + ++ G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 303 YT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ + + ++ + T+++D Y+KCG+ A+ LF M RD+++WN +IA ++G ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A+ L +QM E + P+ ST +L + + + G+ V + ++
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG-LL 252
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
D+ A+ + A KI D M ++ W A++ G
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGG 285
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 303/511 (59%), Gaps = 1/511 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARK+F+++P R V +N++I Y+ E L LY+ M + PD+ TF +++C
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L+ G+E+ V+ G+ +DVFV SS++ +Y + G+ + F +M +++V W+++
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G V N +E + ++ M G + V ++ ++ ACA L G +HGY I+ +
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ DV + +L+ +Y K G+++ A +F M N+V+W A+I+ + QN + ++L
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
MQ+ + D +++VS + ACA +G L G+ +H R+ + N+ + ++IDMY+KCG
Sbjct: 321 MQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR +F+++ R ++SW +I + HGHGE+AL LF +M + VKP+ TFA++ +A
Sbjct: 381 IDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTA 440
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
HSGLVEEGR F+ M+ Y I P +H ACMVDLL RAG + EA + +D M EP ++
Sbjct: 441 CRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVS 500
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW ALL C H + E VA+K+ L+P + + L+SN +A +WE+ A +RK M
Sbjct: 501 VWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLME 560
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ +KK+PG+S+VEVN H F+ +S +
Sbjct: 561 ERELKKIPGHSLVEVNRRFHTFLSGSRSQSS 591
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 202/387 (52%), Gaps = 9/387 (2%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC--GKMNEAMVA 133
S +F L C SL DL I V G G ++ + S+ L + C M+ A
Sbjct: 29 SRSFNYLLNCCSSLPDLS---RIHALVVTNGCGQNLLL-STKLIITACCLAPTMDYARKM 84
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M ++D+ W+++I G G EA+ Y M G+ D ++++CA L
Sbjct: 85 FDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSAL 144
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R G VH ++ + DV VQ+SLV MY+++G VF M NIV+W A+I+G+
Sbjct: 145 REGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGY 204
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QN L + EM G +P++V+LVS L ACA + FL LGK IHGY ++ D ++
Sbjct: 205 VQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDV 264
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++I +Y KCG AR+LFD M ++L+SWN +IA+Y + G A+ LF +M
Sbjct: 265 SLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAE 324
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V D+ T S++SA + G + GR W +V + ++ ++D+ A+ G ++
Sbjct: 325 KVDFDYITMVSVISACASLGALNTGR-WMHELVKRKGLEINVSITNALIDMYAKCGNIDL 383
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNH 459
A ++ + + + W +++ C +H
Sbjct: 384 AREVFERLPCR-SVVSWTSMIGACASH 409
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 200/389 (51%), Gaps = 13/389 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + + +F E+ +R + ++ ++I Y + E LG++ +M+ +P+
Sbjct: 169 LVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPN 228
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T L AC L L +G+ I ++LG DV + ++++ LY KCG + A F+
Sbjct: 229 AVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFD 288
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++LV W++MI N AV ++RM+ E +D D + M+ +I ACA LG
Sbjct: 289 GMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNT 348
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H R+ L ++V + +L+DMYAK G++DLA VF+ + ++V+W ++I A
Sbjct: 349 GRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACAS 408
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G L+L M+ G +P+S + + AC G ++ G+ H ++ R D++++ G
Sbjct: 409 HGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK-HFESMMR-DYSIMPG 466
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++D+ + G A D+M D+ W ++ S IH + E A + ++
Sbjct: 467 VEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLF 526
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRY 399
++ P TF L+S + E GR+
Sbjct: 527 --LLDPQTVTFYVLMSNI----YAEAGRW 549
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 315/542 (58%), Gaps = 7/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
I+ +Y + ARK+F+ +P + +N++I Y + E E + ++ +I E R
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D++T L A L +L++G +I A + G + +V + ++LY KCGK+ F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ ++ D+V +++MI+G NG+ ++ +K + G ++ L+ L
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL---M 336
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
++HGY ++ + V T+L +Y+K ++ A +F ++ +W A+ISG+
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NL 312
QNGL + L EMQ F P+ V++ L ACAQ+G L LGK +H VR DF ++
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSI 455
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T++I MY+KCG + AR LFD M ++ ++WN +I+ YG+HG G+EAL++F +M+ +
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P TF +L A SH+GLV+EG F+ M+ +Y +P+ KHYACMVD+L RAG ++
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL+ +++MS EPG +VW LL C HK ++ V++K+ +L+PD++G H L+SN +
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ + + A VR+T +K + K PGY+++E+ H F D+SH Q ++I L+KL +
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGK 695
Query: 553 MR 554
MR
Sbjct: 696 MR 697
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 235/471 (49%), Gaps = 25/471 (5%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDI----------------VSARKLFEELPLRGVDTYNSI 47
T++S + +II L+G +NDI AR +F + V +N +
Sbjct: 31 TSISHLAQTHAQII-LHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 48 IIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
+ +S ESP L ++ + K D++P+SST+ A+ A D + G I +AV G
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+++ +GS+++ +Y K ++ +A F++M KD + W++MI+G N E++ ++
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 167 RMKKEGIDA-DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ E D ++ ++ A A+L + R G+ +H + + V T + +Y+K
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G + + S +F+ + +IV + A+I G+ NG +L L E+ G S +LVS +
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 286 LACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
G L L +IHGY ++ F + + T++ +YSK AR LFD+ + L
Sbjct: 330 PVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLP 386
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SWN +I+ Y +G E+A+SLF +M ++ P+ T +LSA + G + G++ DL+
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
S + + ++ + A+ G + EA ++ D M T+ W ++SG
Sbjct: 447 RST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISG 495
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 9/393 (2%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
KT ++ + I+LY I LF E + YN++I Y+ L
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +++ R SST + LM + K+ L + + V +++ +Y
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHAS---VSTALTTVYS 365
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
K ++ A F++ K L W++MI+G NG +A+ ++ M+K + V +
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ ACA LG G VH + V T+L+ MYAK G + A +F M++ N
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
VTW +ISG+ +G L + EM + G P V+ + L AC+ G +K G I
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 303 YTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHG 359
+ R+ F + ++D+ + G A + M S W ++ + IH
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
A ++ ++ E + PD+ + LLS + HS
Sbjct: 606 NLARTVSEKLFE--LDPDNVGYHVLLSNI-HSA 635
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 140/283 (49%), Gaps = 10/283 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+N ++ + + +Y N+I SARKLF+E P + + ++N++I Y++ + +
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M K + P+ T T L AC L L +G+ + + + ++V ++++ +Y
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + EA F+ M +K+ V W++MI+G +GQ +EA++ + M GI V +
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS- 239
++ AC+ G + G + I R+ VK +VD+ + GHL A + MS
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 240 RINIVTWGALISG---FAQNGLAGSTLELLMEMQSCGFEPDSV 279
W L+ LA + E L E+ +PD+V
Sbjct: 586 EPGSSVWETLLGACRIHKDTNLARTVSEKLFEL-----DPDNV 623
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 317/554 (57%), Gaps = 1/554 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L ++A+Y + A +LFE +P + T+N +I + E
Sbjct: 269 VKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAF 328
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
GL+ M + RPDS T L A L LK G+E+ V DVF+ S+++++Y
Sbjct: 329 GLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIY 388
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC + A ++ + D+V S+MI+G V NG EA+ ++ + ++ I + V +
Sbjct: 389 FKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIA 448
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ CA + G +HGY +R V+++L+DMYAK G LDL+ ++F MS+
Sbjct: 449 SVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQK 508
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ VTW ++IS F+QNG L+L +M G + +++++ +AL ACA + + GK IH
Sbjct: 509 DEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIH 568
Query: 302 GYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G T++ ++ +++IDMY+KCG A +F+ M ++ +SWN II++YG HG +
Sbjct: 569 GVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVK 628
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
E++SL M E KPDH TF +L+SA +H+GLVEEG F M KY I P +H+ACM
Sbjct: 629 ESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACM 688
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDL +R+G++++A++ + M +P +W ALL C H+ + + ++++ KL+P +
Sbjct: 689 VDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANS 748
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYE 540
G + L+SN A+ +W+ V+ VR+ M+ + + K+PGYS V+VN H F+ DKSH + E
Sbjct: 749 GYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESE 808
Query: 541 DIVYVLKKLYLEMR 554
DI LK L E+R
Sbjct: 809 DIYTSLKTLLQELR 822
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 248/475 (52%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + +AR F+ +P R +N ++ + + L+ M P+
Sbjct: 182 LVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPN 241
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C + DL G ++ AV+ G +V V +++L +Y KC +++A FE
Sbjct: 242 FATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFE 301
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + DLV W+ MI+G V NG EA + M++ G D + ++ L+ A DL +
Sbjct: 302 LMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQ 361
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHGY +R +N+DV + ++LVD+Y K + +A +++ I++V +ISG+
Sbjct: 362 GKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVL 421
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG++ L++ + +P++V++ S L CA + L LG+ IHGY +R ++ +
Sbjct: 422 NGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYV 481
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY+KCG + +F +M +D ++WN +I+S+ +G +EAL LF QM +
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGI 541
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K ++ T ++ LSA + + G+ + + K I+ + ++D+ A+ G +E AL
Sbjct: 542 KYNNITISAALSACASLPAIYYGKEIHGVTI-KGPIKADIFAESALIDMYAKCGNLELAL 600
Query: 435 KIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
++ + M + ++ W +++S G H K S+ + PD + AL+S
Sbjct: 601 RVFEFMPDKNEVS-WNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALIS 654
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 179/326 (54%), Gaps = 1/326 (0%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T +K+C +L + +G + R A +G NDV+VGS+++ +Y G + A A
Sbjct: 139 PDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDA 198
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + +D V W+ M++G + G AV ++ M+ G + + + + CA D
Sbjct: 199 FDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADL 258
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +++ L +V V +L+ MYAK LD A +F+ M + ++VTW +ISG
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGC 318
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNGL L +MQ G PDS++LVS L A + LK GK +HGY VR + ++
Sbjct: 319 VQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDV 378
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++++D+Y KC A+ L+D ++ D++ + +I+ Y ++G EEAL +F ++E
Sbjct: 379 FLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ 438
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGR 398
+KP+ T AS+L + + G+
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQ 464
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 189/531 (35%), Positives = 308/531 (58%), Gaps = 3/531 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + V A KLF+E P R V +N++I Y + L +++M + P+
Sbjct: 147 LMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPN 206
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TFTV + +C L++L+ G+E+ R+ +E D FV S+++++Y KCG + A FE
Sbjct: 207 SVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFE 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ RK+ + W++MI G G R ++ RM EG + + +I A + R
Sbjct: 267 KIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRH 326
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY +R +++D+ + SL+D Y K G++ A +F+ +S+ +V+W +ISG
Sbjct: 327 GKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVM 386
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G L + M+ +PD+++ S L AC+Q+ L G+ +H + + + N ++
Sbjct: 387 VGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIV 446
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY+KCG AR LF Q+ RDL+SW +I +YG HG EAL LF +M + V
Sbjct: 447 MGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNV 506
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+ D TF ++LSA SH+GLV+EG +F+ MV +Y I+P +HY+C++DLL RAG + EA
Sbjct: 507 RADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAY 566
Query: 435 KIVD-SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+I+ S T + + L S C H F +G ++ K +++++PDD + L+SN +A
Sbjct: 567 EILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASV 626
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
KW+EV VR+ M++ G+KK PG S +E+N +H F EDKS N D VY
Sbjct: 627 NKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKS-NPLADGVY 676
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 262/465 (56%), Gaps = 7/465 (1%)
Query: 16 IIALYGGKNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDV 72
+I Y +D SA +F+ + PL V +N+++ AY+ E L L++Q+ V
Sbjct: 44 LIGFYFSCHDYASAELVFQTNDCPL-DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYV 102
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD T+ V LKAC L + G I ++ G DVFVGSS++N+Y KC + +A+
Sbjct: 103 RPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIK 162
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++ ++D+ CW+++I+ +G+ A+ + +MK+ G + + V ++ +C L +
Sbjct: 163 LFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLN 222
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH I R + LD V ++LVDMY K G L++A VF+ + R N +TW A+I+G
Sbjct: 223 LERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITG 282
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
++ G + S +ELLM M G +P ++L S + A ++ L+ GK IHGY +R R D +
Sbjct: 283 YSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVD 342
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + S+ID Y KCG S A +F + +++SWNV+I+ + + G+ +AL ++ M E
Sbjct: 343 IFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKE 402
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKPD TF+S LSA S +++GR +++ +K++ E ++D+ A+ G+V+
Sbjct: 403 HHVKPDALTFSSTLSACSQLAALDKGRELHYCIIN-HKLEANEIVMGALLDMYAKCGDVD 461
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
EA K+ + L W +++ +H + S ++ ++ KLN
Sbjct: 462 EARKLFHQLPKR-DLVSWTSMIFAYGSHGQASEALRLFDEMQKLN 505
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 189/384 (49%), Gaps = 5/384 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T AL+ C S LK G+ I ++ G+ +++ + S++ Y C A + F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGD 192
+ D+ W+++++ N + EA+ + ++ + D +++AC LG
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G +H + ++ L DV V +SL++MYAK A +F + ++ W A+IS
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFN 311
+ ++G A L+ +M+ GFEP+SV+ + +C ++ L+ GK +H + RR +
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY KCG A+ +F+++ ++ I+WN +I Y + G + L ++M +
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KP T S++ A S S + G++ ++ + +I ++D + G V
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYIL-RNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A I ++S ++ W ++SG
Sbjct: 361 SAETIFRTISKNEVVS-WNVMISG 383
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I L A +G ++ +Y D+ ARKLF +LP R + ++ S+I AY E
Sbjct: 435 IINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEA 494
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKAC--VSLMD---LKMGEEIWRKAVELGYGNDVFVGS 115
L L+++M K +VR DS TF L AC L+D + E + + ++ G + S
Sbjct: 495 LRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEH----YS 550
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQR 139
+++L + G+++E A+E +QR
Sbjct: 551 CLIDLLGRAGRLHE---AYEILQR 571
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 311/530 (58%), Gaps = 2/530 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K F + + ++N+I+ ++S+ + ++VL L+ +M+KE DS A+KAC
Sbjct: 66 ASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFG 125
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L + + A++L D +V +++N+Y + G + EA FE++ K+ V W M
Sbjct: 126 LSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 185
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH- 207
I G + + + + RM++ G + D V+ GLIQAC ++ + G + HG I+++
Sbjct: 186 IKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNF 245
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
++ + +QTSLVDMY K G LD A +F+ +S ++V W A+I+GFA+NG A ++ +
Sbjct: 246 IDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFR 305
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+M + P+SV+ S +LAC+ +G LK G+S+HGY +R + ++ TS IDMY+KCG
Sbjct: 306 QMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCG 365
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
A +F Q+ +++ SW+ +I +G+HG EAL+LF +M P+ TF S+LS
Sbjct: 366 CIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLS 425
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSG +EEG F M Y I P E+HYACMVDLL RAG+++EAL +++M TEPG
Sbjct: 426 ACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGA 485
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+ W ALL C H++ + E+VAKK+L L D G++ ++SN +A WE V R M
Sbjct: 486 SAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKM 545
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ G+ K+ G++ +E+ +L+ F ED+ + I + L MR +
Sbjct: 546 CEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMREL 595
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 17/429 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A K+FEE+PL+ + +I + F V L+++M + D
Sbjct: 154 LMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELD 213
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAF 134
++AC ++ K G+ ++ + ++ F+ +S++++Y+KCG ++ A+ F
Sbjct: 214 PFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLF 273
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E++ +D+V WS++I G NG+ E++ +++M + + + V ++ AC+ LG +
Sbjct: 274 EEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLK 333
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHGY IR + LDVK TS +DMYAK G + A VF + N+ +W +I+GF
Sbjct: 334 QGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFG 393
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+GL L L EM+S P+SV+ VS L AC+ G ++ G S R + V
Sbjct: 394 MHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVE 453
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ + G A + + M + S W ++ + IH E A + +++
Sbjct: 454 EHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLP 513
Query: 372 TMVKPDHSTFASLLSAL-SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
++ D S +LS + + G+ E MV K +++ EK +V + E+
Sbjct: 514 --LESDQSGVYVMLSNIYADVGMWE--------MVKKTRLKMCEKGIHKIVGFTSI--EI 561
Query: 431 EEALKIVDS 439
EE L + S
Sbjct: 562 EEKLYLFSS 570
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 4/351 (1%)
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
+ G + Y++ G ++ A AF + ++L W++++ N + + +KRM K
Sbjct: 47 LLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLK 106
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
EG D ++ ++AC L + H +I+ L D V +L+++Y + G L+
Sbjct: 107 EGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEE 166
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF+ + N V WG +I G EL M+ GFE D + + AC
Sbjct: 167 AHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGN 226
Query: 291 IGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ K GK+ HG +++ D N L TS++DMY KCG A LF+++ RD++ W+
Sbjct: 227 VYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSA 286
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
IIA + +G E++S+F QM+ V P+ TFAS++ A S G +++GR M+ +
Sbjct: 287 IIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI-RN 345
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++ K+Y +D+ A+ G + A ++ + E + W +++G H
Sbjct: 346 GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMH 395
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI+ + + I +Y IV+A ++F ++P + V +++++I + E
Sbjct: 342 MIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEA 401
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
L L+ +M + P+S TF L AC + EE W K++ YG +
Sbjct: 402 LNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI---EEGWSHFKSMSRDYGITPVEEHYAC 458
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKD-LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
M++L + GK++EA+ M + W +++ + + A + K++ D
Sbjct: 459 MVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQ 518
Query: 176 DEVVMMGLIQACADLG 191
V +M L AD+G
Sbjct: 519 SGVYVM-LSNIYADVG 533
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 316/554 (57%), Gaps = 3/554 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
+I LY + A K+F E P V + SII Y + SP L +++M+ E V P
Sbjct: 283 LIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSP 342
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T AC L + K+G + G N + + +S+L+LY K G + A F
Sbjct: 343 DPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLF 402
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+M KD++ WS+M+ NG + +D + M + I + V ++ +++ACA + +
Sbjct: 403 REMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLE 462
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G+ +H ++ ++ V T+L+DMY K + A +F M + +++ W L SG+A
Sbjct: 463 EGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA 522
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
NG+ ++ + M S G PD+++LV L +++G L+ +H + ++ F+ N
Sbjct: 523 DNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQF 582
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-T 372
+G S+I++Y+KC A +F M +D+++W+ IIA+YG HG GEEAL LF QM +
Sbjct: 583 IGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHS 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
KP++ TF S+LSA SHSGL++EG FD+MV+KYK++P +HYA MVDLL R GE++
Sbjct: 643 DTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDM 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL ++++M + G +W ALL C H+ +GE AK + L+P+ G + L+SN +++
Sbjct: 703 ALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSV 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ W +R+ +++ + K+ G SVVE+ E+ +FI D+ H++ + I +L KL+ +
Sbjct: 763 DENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAK 822
Query: 553 MRAISSWLQGHMEE 566
MR ++ Q +EE
Sbjct: 823 MREVAFDPQVQIEE 836
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 254/465 (54%), Gaps = 12/465 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM----- 67
V ++ LY I A KLF+E P R V +N+++ +Y + E L L+ QM
Sbjct: 174 VTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSS 233
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ + RPD+ + ++ALK+C L L +G+ I ++ D+FVGS++++LY KCG+M
Sbjct: 234 VSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQM 293
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQA 186
N+A+ F + + D+V W+S+I+G +G P A+ + RM E + D V ++ + A
Sbjct: 294 NDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASA 353
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA L + + G SVHG+ R+ L+ + + SL+ +Y KTG + AS++F+ MS +I++W
Sbjct: 354 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISW 413
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+++ +A NG L+L EM +P+ V++VS L ACA I L+ G IH V
Sbjct: 414 STMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVN 473
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F+ + T+++DMY KC P A LF++M +D+I+W V+ + Y +G E++ +
Sbjct: 474 YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWV 533
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F M+ + +PD +L+ +S G++++ V K + + A ++++ A
Sbjct: 534 FRNMLSSGTRPDAIALVKILTTISELGILQQA-VCLHAFVIKNGFENNQFIGASLIEVYA 592
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+ +E+A K+ M T + W ++++ H + GE+ K
Sbjct: 593 KCSSIEDANKVFKGM-TYKDVVTWSSIIAAYGFHGQ---GEEALK 633
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 194/382 (50%), Gaps = 16/382 (4%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C S + + ++ + ++ G +D F+ + + LY + ++ A F++ + +
Sbjct: 146 LETCCSKLSI---SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTV 202
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMK-------KEGIDADEVVMMGLIQACADLGDSRF 195
W++++ F G+ E + +++M +E D V + +++CA L
Sbjct: 203 YLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIA--LKSCAGLRKLLL 260
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ + ++ D+ V ++L+D+Y K G ++ A VF + ++V W ++ISG+ Q
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQ 320
Query: 256 NGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+G L M S PD V+LVS ACAQ+ KLG+S+HG+ R+ D L
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L S++ +Y K G A LF +M +D+ISW+ ++A Y +G + L LF +M++
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKR 440
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP+ T S+L A + +EEG +L V+ Y + ++D+ + E+A
Sbjct: 441 IKPNWVTVVSVLRACACISNLEEGMKIHELAVN-YGFEMETTVSTALMDMYMKCFSPEKA 499
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + M + +A W L SG
Sbjct: 500 VDLFNRMPKKDVIA-WAVLFSG 520
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 318/540 (58%), Gaps = 2/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA ++F E+ + ++NS++ Y + E + + +M++ PD
Sbjct: 305 LLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPD 364
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L A L L G E+ AV+ +D+ + ++++++Y+KC + + F+
Sbjct: 365 HACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFD 424
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ KD V W+++I + + EA+ ++ +KEGI D ++M +++AC+ L
Sbjct: 425 RMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISL 484
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH Y+IR L LD+ ++ ++D+Y + G + A ++F+ + + +IVTW ++++ FA+
Sbjct: 485 LKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAE 543
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NGL + L +M + G +PDSV+LV L A A + L GK IHG+ +R +F +
Sbjct: 544 NGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV 603
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S++DMYS CG + A +FD+ + +D++ W +I + G+HGHG++A+ +F +M+ET V
Sbjct: 604 VSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGV 663
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SHS LV+EG+++ D+MVSKYK+QP ++HYAC+VDLL R+G+ EEA
Sbjct: 664 SPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAY 723
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K + SM EP VW ALL C HK + K+L+L PD+ G + LVSN FA
Sbjct: 724 KFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMG 783
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW V +R M + G++K P S +E+ +H F D SH + I L ++ ++R
Sbjct: 784 KWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLR 843
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 225/457 (49%), Gaps = 32/457 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--- 71
+++ +YG + A +LF+ +P R V ++N++I A E +G+Y M +
Sbjct: 98 KLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVA 157
Query: 72 -VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD T LKAC + D + G E+ AV+ G V ++++ +Y KCG ++ A
Sbjct: 158 GAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSA 217
Query: 131 MVAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
+ FE M+ +D+ W+S I+G V NG EA+D ++RM+ +G + +G++Q CA+
Sbjct: 218 LRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAE 277
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L G +H ++ +++ LV MYA+ G +D A VF+ + + ++W ++
Sbjct: 278 LAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSM 336
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
+S + QN L ++ EM GF PD +VS L A +G L G+ +H Y V+ R
Sbjct: 337 LSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRL 396
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D +L + +++DMY KC C+ +FD+M+ +D +SW IIA Y EA+ F
Sbjct: 397 DSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRT 456
Query: 369 MIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+ +K D S+L A S HS + G DL++
Sbjct: 457 AQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNG--LLDLILKNR--------- 505
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++D+ GEV AL I + M + + W ++++
Sbjct: 506 --IIDIYGECGEVCYALNIFE-MLDKKDIVTWTSMVN 539
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 244/477 (51%), Gaps = 12/477 (2%)
Query: 16 IIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++ +Y + SA ++FE + R V ++NS I + E L L+ +M +
Sbjct: 204 LVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSM 263
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+S T L+ C L L G E+ ++ G ++ +++L +Y +CG ++ A+ F
Sbjct: 264 NSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVF 322
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ KD + W+SM++ V N EA+D + M + G + D ++ L+ A LG
Sbjct: 323 REIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLI 382
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH Y++++ L+ D+++ +L+DMY K ++ ++ VF M + V+W +I+ +A
Sbjct: 383 NGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYA 442
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
Q+ + Q G + D + + S L AC+ + + L K +H Y +R +L+L
Sbjct: 443 QSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLIL 502
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ID+Y +CG A +F+ + +D+++W ++ + +G EA++LF +M+ +
Sbjct: 503 KNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGI 562
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEEA 433
+PD +L A++ + +G+ ++ K+ ++ + +VD+ + G + A
Sbjct: 563 QPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSSLVDMYSGCGSMNYA 620
Query: 434 LKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALV 486
LK+ D + + +W A++ +G H H K +I + K++L+ ++PD + AL+
Sbjct: 621 LKVFDEAKCKD-VVLWTAMINATGMHGHGKQAI--YIFKRMLETGVSPDHVSFLALL 674
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 200/387 (51%), Gaps = 13/387 (3%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
LG + F+ + +L +Y KCG++ +A F+ M + + W+++I + +G EAV
Sbjct: 87 LGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 165 YKRMKKE----GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
Y+ M+ G D + +++AC GD R G VHG +++ L+ V +LV
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVG 206
Query: 221 MYAKTGHLDLASHVFKNMSR-INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
MYAK G LD A VF+ M ++ +W + ISG QNG+ L+L MQS GF +S
Sbjct: 207 MYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSY 266
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ V L CA++ L G+ +H ++ +FN+ +++ MY++CG A +F ++
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREI 325
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+D ISWN +++ Y + EA+ F +M++ PDH+ SLLSA+ H G + GR
Sbjct: 326 GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGR 385
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
V K ++ + ++D+ + VE + ++ D M + ++ W +++
Sbjct: 386 EVHAYAV-KQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVS-WTTIIACYAQ 443
Query: 459 HKKFS--IGE--KVAKKVLKLNPDDLG 481
++S IG+ K+ +K++P +G
Sbjct: 444 SSRYSEAIGKFRTAQKEGIKVDPMMMG 470
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 329/568 (57%), Gaps = 11/568 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ Y I A K+F+E+ R V +N+++ R E +GL+ +M+ E V
Sbjct: 107 GSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVA 166
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D+ T + L CV L D + + AV+ G ++FV ++++++Y K G + EA
Sbjct: 167 GDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCV 226
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M+ +DLV W+S+I+G GQ A+ ++ M+ G+ D + ++ L A A GD
Sbjct: 227 FHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDG 286
Query: 194 RFGLSVHGYSIRRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R S+H Y +RR ++D + ++VDMYAK +++ A +F +M + V+W LI+G
Sbjct: 287 RSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITG 346
Query: 253 FAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+ QNGLA +E MQ G + + VS L A + +G L+ G +H +++ +
Sbjct: 347 YMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNV 406
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +GT +ID+Y+KCG + A LF++M R WN II+ G+HGHG EAL+LF +M
Sbjct: 407 DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQ 466
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +KPDH TF SLL+A SH+GLV++GR +FD+M Y I P KHYACM D+L RAG++
Sbjct: 467 QEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQL 526
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA + +M +P AVW ALL C H +G+ ++ + +L+P+++G + L+SN +
Sbjct: 527 DEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMY 586
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS--HNQYEDIVYVLKK 548
A KW+ V VR +R+ ++K PG+S +EV ++ F +++ H Q+E+I L+
Sbjct: 587 AKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRS 646
Query: 549 LYLEMRAI------SSWLQGHMEEHEEH 570
L ++R++ S LQ ++ +EH
Sbjct: 647 LLAKIRSVGYVSDYSFVLQDVEDDEKEH 674
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 226/428 (52%), Gaps = 23/428 (5%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIK--EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
N++I A+SR P L ++ RPD TF ++A S ++ A
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 103 VELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
+ LG VF S+++ Y++ G+++EA F++M +D+ W++M++GL N + EA
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
V + RM EG+ D V + ++ C LGD L +H Y+++ L+ ++ V +L+D+
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y K G L+ A VF M ++VTW ++ISG Q G + L++ M+ G PD ++L
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
VS A AQ G + KS+H Y +RR +D +++ G +++DMY+K A+ +FD M
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMP 333
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGR 398
+D +SWN +I Y +G EA+ + M + +K TF S+L A SH G +++G
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGM 393
Query: 399 YWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALL 453
L + KI Y C++DL A+ G++ EA+ + + M ST P W A++
Sbjct: 394 RMHALSI---KIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGP----WNAII 446
Query: 454 S--GCHNH 459
S G H H
Sbjct: 447 SGLGVHGH 454
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 308/542 (56%), Gaps = 2/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+++Y + A ++F+ + R V ++ ++I +++ E +N+MI+ + P+
Sbjct: 353 ILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPN 412
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC S LK G++I +E GYG+D V +++L++Y KCG + +A FE
Sbjct: 413 RVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFE 472
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ ++++V W++MI V + Q A+ ++ + KEGI + ++ C
Sbjct: 473 KISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLEL 532
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH ++ L D+ V +LV M+ G L A ++F +M + ++V+W +I+GF Q
Sbjct: 533 GKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G + MQ G +PD ++ L ACA L G+ +H T FD ++++
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
GT +I MY+KCG A +F ++ +++ SW +I Y HG G+EAL LF QM + V
Sbjct: 653 GTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGV 712
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF LSA +H+GL+EEG + F M ++ I+P +HY CMVDL RAG + EA+
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAV 771
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M EP VW ALL C H + EK A+K L+L+P+D G+ ++SN +A
Sbjct: 772 EFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAG 831
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W+EVA +RK M G+ K PG S +EV+G++H F +DK+H Q E+I L++L++EMR
Sbjct: 832 MWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR 891
Query: 555 AI 556
+
Sbjct: 892 QL 893
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 256/475 (53%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + +SA+++F+++ + V ++N ++ Y + E L+ QM+++ V+PD
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC ++ G E++ ++ G+ D+FVG++++N+++KCG + +A F+
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +DLV W+SMI GL +G+ ++A + ++RM++EG+ D+V + L++AC
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + ++ V T+++ MY K G ++ A VF + N+V+W A+I+GFAQ
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G +M G EP+ V+ +S L AC+ LK G+ I + + + + +
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++ MY+KCG A +F+++ +++++WN +I +Y H + AL+ F +++ +
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ STF S+L+ S +E G+ W ++ K ++ +V + G++ A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ + M L W +++G H K + K + + + PD + L++
Sbjct: 570 NLFNDMPKRD-LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 226/421 (53%), Gaps = 10/421 (2%)
Query: 62 GLYNQMIKEDVRPDSS-------TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
G +N+ ++ R DSS T++ L+ C+ +L GE I+ + G D+F+
Sbjct: 89 GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMW 148
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
++++N+Y KCG A F+ M+ KD+ W+ ++ G V +G EA +++M ++ +
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D+ + ++ ACAD + G ++ ++ + D+ V T+L++M+ K G + A+ V
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F N+ ++VTW ++I+G A++G L M+ G +PD V+ VS L AC L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK +H +D + +GT+++ MY+KCG A +FD ++ R+++SW +IA +
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
HG +EA F +MIE+ ++P+ TF S+L A S ++ G+ D ++ +
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSD 447
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
++ ++ + A+ G +++A ++ + +S + + W A+++ H+++ + +L
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALL 506
Query: 474 K 474
K
Sbjct: 507 K 507
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
KD ++++N L GQ EA+ +R+ I L+Q C + G +
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
+ + + + D+ + +L++MYAK G+ A +F +M ++ +W L+ G+ Q+GL
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
+L +M +PD + VS L ACA + G+ ++ ++ +D +L +GT++
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
I+M+ KCG A +FD + +RDL++W +I HG ++A +LF +M E V+PD
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIV 437
F SLL A +H +E+G+ M K TE + ++ + + G +E+AL++
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARM--KEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 438 DSMSTEPGLAVWVALLSGCHNHKK 461
D + + W A+++G H +
Sbjct: 371 DLVKGR-NVVSWTAMIAGFAQHGR 393
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 310/577 (53%), Gaps = 37/577 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
+ I +Y D+ AR LF+++P + T+ +I A ++ E + YN K V
Sbjct: 16 KFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD KAC SL D+ + + A+ G+ +DV +G++++++Y KC A +
Sbjct: 76 PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLV 135
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE M +D++ W+SM + V G REA+ A+++M G + V + ++ AC DL D
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR------------- 240
+ G VHG+ +R + +V V ++LV+MYA + A VF +MSR
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255
Query: 241 ----------------------INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+N +W A+I G QNG LE+L MQ+ GF+P+
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQ 337
+++ S L AC + L+ GK IHGY R + F +L T+++ MY+KCG +R +F
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSM 375
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M RD +SWN +I + +HG+GEEAL LF +M+++ V+P+ TF +LS SHS LV+EG
Sbjct: 376 MTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEG 435
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
FD M + ++P H++CMVD+L+RAG +EEA + + M EP W ALL GC
Sbjct: 436 LLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCR 495
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
+K +G A ++ ++ D+ G + L+SN + W E + RK MR G+ K PG
Sbjct: 496 VYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGC 555
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S ++V +H F++ DKS++Q ++I L + +MR
Sbjct: 556 SWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMR 592
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/552 (35%), Positives = 324/552 (58%), Gaps = 10/552 (1%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ A K F E+ + +N+II Y++K + +Y M V P+ TF LK
Sbjct: 34 DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 93
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC +G++I + + G+G++VFV +S++++Y K G+++ A + F+K+ + +V
Sbjct: 94 ACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVS 153
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+S+I+G V NG P EA++ +K M++ + D + ++ ++ A ++ D G S+HG
Sbjct: 154 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVT 213
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ L + + SL MYAK G +++A F M + N++ W A+ISG+A NG ++
Sbjct: 214 KLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIK 273
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
L EM + DS+++ SA+LA AQ+G L+L + + GY + + + + T +IDMY+
Sbjct: 274 LFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 333
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG AR +FD++ +D++ W+V+I YG+HGHG+EA+ L+ +M + V P+ TF
Sbjct: 334 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 393
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LL+A +SGLV+EG F LM + I+P +HY+C+VDLL RAG + +A + SM +
Sbjct: 394 LLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 452
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
PG++VW ALLS C H+K +GE A+++ L+P + G + +SN +A W VA VR
Sbjct: 453 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVR 512
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGH 563
M + G+ K G+S +E+NG L F + D+SH + ++I L + LE R ++ H
Sbjct: 513 LMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDR--LEKRLKAAGYVPH 570
Query: 564 ME------EHEE 569
ME HEE
Sbjct: 571 MESVLHDLNHEE 582
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 196/394 (49%), Gaps = 12/394 (3%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ +N + G +N A AF ++ D++ W+++I G + Y M+
Sbjct: 20 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
+ + + +++AC G +HG + + +V VQ SLV MYAK G + A
Sbjct: 80 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VF + +V+W ++ISG+ QNG L + EM+ C +PD ++LVS + A +
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199
Query: 292 GFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
L GKSIHG + F+ ++V+ S+ MY+K G+ AR F++M+ +LI WN
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 257
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I+ Y +G+GEEA+ LF +MI ++ D T S + A + G +E R W D +SK
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR-WLDGYISKS 316
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGE 466
+ + ++D+ A+ G + A + D ++ + + +W ++ G H H + +I
Sbjct: 317 EYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGHGQEAICL 375
Query: 467 KVAKKVLKLNPDD---LGIHALVSNFFAMEQKWE 497
K + P+D +G+ N +++ WE
Sbjct: 376 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWE 409
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 12/348 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y I AR +F++L R V ++ SII Y + P E L ++ +M + +V+PD
Sbjct: 126 LVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPD 185
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A ++ DL G+ I +LG + + S+ +Y K G + A F
Sbjct: 186 WIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 245
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M++ +L+ W++MI+G NG EA+ ++ M + I D + M + A A +G
Sbjct: 246 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 305
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ GY + D V T L+DMYAK G + LA VF ++ ++V W +I G+
Sbjct: 306 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL 365
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI------HGYTVRRFD 309
+G + L EM+ G P+ + + L AC G +K G + HG
Sbjct: 366 HGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQH 425
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+ + V+D+ + G + A M + +S W ++++ IH
Sbjct: 426 Y-----SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 314/543 (57%), Gaps = 2/543 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +IA Y + SA LF+EL V ++NS+I L ++ QM+ V
Sbjct: 508 VNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV 567
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
D +T L A ++ +L +G + V+ + +V +++L++Y KCG +N A
Sbjct: 568 EVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE 627
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F KM +V W+S I V G +A+ + M+ +G+ D + ++ ACA
Sbjct: 628 VFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS 687
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH Y I+ + ++ V +L++MYAK G ++ A VF + +IV+W +I G
Sbjct: 688 LDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGG 747
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-N 311
++QN L LEL ++MQ F+PD +++ L ACA + L G+ IHG+ +RR F +
Sbjct: 748 YSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 806
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L + +++DMY+KCG+ A+ LFD + +DLISW V+IA YG+HG G EA+S F +M
Sbjct: 807 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 866
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++PD S+F+ +L+A SHSGL+ EG +F+ M ++ ++P +HYAC+VDLLAR G +
Sbjct: 867 AGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 926
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A K ++SM +P +W LLSGC H + EKVA+ + +L PD+ + +++N +A
Sbjct: 927 KAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYA 986
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+KWEEV +RK M+K G K+ PG S +EV G+ + F+ + H Q + I +L+KL +
Sbjct: 987 EAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTM 1046
Query: 552 EMR 554
+M+
Sbjct: 1047 QMQ 1049
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 240/444 (54%), Gaps = 6/444 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ +Y D+V RK+F+++ V +N ++ Y++ + E + L+ +M K V
Sbjct: 408 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 467
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ TFT LK +L +K + + ++LG+G++ V +S++ Y K G + A
Sbjct: 468 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 527
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ D+V W+SMING V NG ++ + +M G++ D ++ ++ A A++G+
Sbjct: 528 FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNL 587
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G ++HG+ ++ + +V +L+DMY+K G+L+ A+ VF M IV+W + I+ +
Sbjct: 588 SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY 647
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+ GL + L EMQS G PD ++ S + ACA L G+ +H Y ++ NL
Sbjct: 648 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 707
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I+MY+KCG AR +F ++ +D++SWN +I Y + EAL LFL M +
Sbjct: 708 PVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QK 766
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEVE 431
KPD T A +L A + +++GR ++ + ++ H AC +VD+ A+ G +
Sbjct: 767 QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF--SDLHVACALVDMYAKCGLLV 824
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A + D M + L W +++G
Sbjct: 825 LAQLLFD-MIPKKDLISWTVMIAG 847
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 199/380 (52%), Gaps = 3/380 (0%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
+++ L+ C L+ G+ + + G D +G+ ++ +YV CG + + F+K
Sbjct: 370 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + W+ +++ G RE+V +K+M+K G+ + +++ A LG +
Sbjct: 430 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
VHGY ++ + V SL+ Y K G ++ A ++F +S ++V+W ++I+G N
Sbjct: 490 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
G +G+ LE+ ++M G E D +LVS L+A A IG L LG+++HG+ V+ F +V
Sbjct: 550 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFS 609
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++DMYSKCG + A +F +M ++SW IA+Y G +A+ LF +M V+
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD T S++ A + S +++GR ++ K + ++++ A+ G VEEA +
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVI-KNGMGSNLPVTNALINMYAKCGSVEEA-R 727
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+V S + W ++ G
Sbjct: 728 LVFSKIPVKDIVSWNTMIGG 747
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 316/550 (57%), Gaps = 6/550 (1%)
Query: 7 SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
+A G ++ ++ A G D R++FE+L R + +N++I + E +YNQ
Sbjct: 262 TAVGTALVKMYAKCGSYKD---CRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M +E V P+ T+ + L ACV+ L G+EI + + G+ +D+ V ++++++Y +CG
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +A + F+KM RKD++ W++MI GL +G EA+ Y+ M++ G++ + V ++ A
Sbjct: 379 IKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNA 438
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C+ +G +H + L D V +LV+MY+ G + A VF M + +IV +
Sbjct: 439 CSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAY 498
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+I G+A + L L+L +Q G +PD V+ ++ L ACA G L+ + IH VR
Sbjct: 499 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTL-VR 557
Query: 307 RFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ F + +G +++ Y+KCG S A +F++M R++ISWN II HG G++AL
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQ 617
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF +M VKPD TF SLLSA SH+GL+EEGR +F M + I PT +HY CMVDLL
Sbjct: 618 LFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLL 677
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG+++EA ++ +M + +W ALL C H + E+ A+ LKL+ D+ ++
Sbjct: 678 GRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYV 737
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
+S+ +A W+ A +RK M + G+ K PG S ++V +LH F+ ED+SH Q E I
Sbjct: 738 ALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYA 797
Query: 545 VLKKLYLEMR 554
L +L M+
Sbjct: 798 ELDRLTHAMK 807
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 239/450 (53%), Gaps = 9/450 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS---RKESPFEVLGLYNQMIKEDV 72
I+ +Y I AR++F+++ + V ++ I Y+ R E+ FE+ + +M +E V
Sbjct: 167 ILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEI---FQKMEQEGV 223
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+ T+ L A S LK G+ + + + G+ +D VG++++ +Y KCG +
Sbjct: 224 VPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQ 283
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
FEK+ +DL+ W++MI GL G EA + Y +M++EG+ +++ + L+ AC +
Sbjct: 284 VFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAA 343
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G +H + D+ VQ +L+ MY++ G + A VF M R ++++W A+I G
Sbjct: 344 LHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGG 403
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
A++G L + EMQ G EP+ V+ S L AC+ L+ G+ IH V +
Sbjct: 404 LAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G ++++MYS CG AR +FD+M RD++++N +I Y H G+EAL LF ++ E
Sbjct: 464 AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+KPD T+ ++L+A ++SG +E R L+ T A +V A+ G
Sbjct: 524 EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA-LVSTYAKCGSFS 582
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+A + + M T+ + W A++ G H +
Sbjct: 583 DASIVFEKM-TKRNVISWNAIIGGSAQHGR 611
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 243/473 (51%), Gaps = 10/473 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
+V +I +Y I AR+++++L R V ++N++++ Y + + L L QM +
Sbjct: 60 TVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQ 119
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ PD +T L +C S L+ G EI +A++ G DV V + +LN+Y KCG + E
Sbjct: 120 HGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEE 179
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+KM++K +V W+ I G G+ A + +++M++EG+ + + + ++ A +
Sbjct: 180 AREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
++G +VH + D V T+LV MYAK G VF+ + +++ W +
Sbjct: 240 PAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 299
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I G A+ G E+ +MQ G P+ ++ V L AC L GK IH + F
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++ + ++I MYS+CG AR +FD+M +D+ISW +I G G EAL+++ +
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARA 427
M + V+P+ T+ S+L+A S +E GR +V T+ H +V++ +
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAG--LATDAHVGNTLVNMYSMC 477
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
G V++A ++ D M + + + A++ G H ++G++ K +L + L
Sbjct: 478 GSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGL 526
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 226/466 (48%), Gaps = 47/466 (10%)
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
++ + +SS + LK C+ + DL G ++ + ++ D + ++++N+Y++CG +
Sbjct: 16 QQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIE 75
Query: 129 EAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
EA ++K+ + + W++M+ G + G +A+ ++M++ G+ D +M + +
Sbjct: 76 EARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSS 135
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C G +G +H +++ L DVKV +++MYAK G ++ A VF M + ++V+W
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
I G+A G + + E+ +M+ G P+ ++ +S L A + LK GK++H +
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN 255
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ + +GT+++ MY+KCG R +F+++ +RDLI+WN +I G+ EEA +
Sbjct: 256 AGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEV 315
Query: 366 FLQMIETMVKPDHSTFASLLSAL-----------------------------------SH 390
+ QM V P+ T+ LL+A S
Sbjct: 316 YNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSR 375
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS---TEPGLA 447
G +++ R FD MV K I + M+ LA++G EAL + M EP
Sbjct: 376 CGSIKDARLVFDKMVRKDVIS-----WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRV 430
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLN-PDDLGIHALVSNFFAM 492
+ ++L+ C + G ++ ++V++ D + + N ++M
Sbjct: 431 TYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSM 476
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 178/372 (47%), Gaps = 48/372 (12%)
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
AVD + ++++G + M +++ C ++ D G VH + I+ D +L++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 221 MYAKTGHLDLASHVFKNMSRI--NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
MY + G ++ A V+K +S + + +W A++ G+ Q G L+LL +MQ G PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+++S L +C G L+ G+ IH ++ F++ + +++MY+KCG AR +FD+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-------- 389
M+ + ++SW + I Y G E A +F +M + V P+ T+ S+L+A S
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 390 ---HSGLVEEG------------------------RYWFDLMVSKYKIQPTEKHYACMVD 422
HS ++ G R F+ +V++ I + M+
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA-----WNTMIG 301
Query: 423 LLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN-PD 478
LA G EEA ++ + M E P +V LL+ C N G+++ +V K
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361
Query: 479 DLGI-HALVSNF 489
D+G+ +AL+S +
Sbjct: 362 DIGVQNALISMY 373
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/552 (35%), Positives = 324/552 (58%), Gaps = 10/552 (1%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ A K F E+ + +N+II Y++K + +Y M V P+ TF LK
Sbjct: 49 DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 108
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC +G++I + + G+G++VFV +S++++Y K G+++ A + F+K+ + +V
Sbjct: 109 ACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVS 168
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+S+I+G V NG P EA++ +K M++ + D + ++ ++ A ++ D G S+HG
Sbjct: 169 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVT 228
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ L + + SL MYAK G +++A F M + N++ W A+ISG+A NG ++
Sbjct: 229 KLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIK 288
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
L EM + DS+++ SA+LA AQ+G L+L + + GY + + + + T +IDMY+
Sbjct: 289 LFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 348
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG AR +FD++ +D++ W+V+I YG+HGHG+EA+ L+ +M + V P+ TF
Sbjct: 349 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 408
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LL+A +SGLV+EG F LM + I+P +HY+C+VDLL RAG + +A + SM +
Sbjct: 409 LLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 467
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
PG++VW ALLS C H+K +GE A+++ L+P + G + +SN +A W VA VR
Sbjct: 468 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVR 527
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGH 563
M + G+ K G+S +E+NG L F + D+SH + ++I L + LE R ++ H
Sbjct: 528 LMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDR--LEKRLKAAGYVPH 585
Query: 564 ME------EHEE 569
ME HEE
Sbjct: 586 MESVLHDLNHEE 597
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 206/417 (49%), Gaps = 12/417 (2%)
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
M LK ++++ + + G F+ +N + G +N A AF ++ D++ W+++
Sbjct: 12 FMLLKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAI 71
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G + Y M+ + + + +++AC G +HG + +
Sbjct: 72 IKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGF 131
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V VQ SLV MYAK G + A VF + +V+W ++ISG+ QNG L + E
Sbjct: 132 GSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKE 191
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKC 325
M+ C +PD ++LVS + A + L GKSIHG + F+ ++V+ S+ MY+K
Sbjct: 192 MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKR 249
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G+ AR F++M+ +LI WN +I+ Y +G+GEEA+ LF +MI ++ D T S +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
A + G +E R W D +SK + + ++D+ A+ G + A + D ++ +
Sbjct: 310 LASAQVGSLELAR-WLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVA-DKD 367
Query: 446 LAVWVALL--SGCHNHKKFSIGEKVAKKVLKLNPDD---LGIHALVSNFFAMEQKWE 497
+ +W ++ G H H + +I K + P+D +G+ N +++ WE
Sbjct: 368 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWE 424
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 12/348 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y I AR +F++L R V ++ SII Y + P E L ++ +M + +V+PD
Sbjct: 141 LVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPD 200
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A ++ DL G+ I +LG + + S+ +Y K G + A F
Sbjct: 201 WIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 260
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M++ +L+ W++MI+G NG EA+ ++ M + I D + M + A A +G
Sbjct: 261 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 320
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ GY + D V T L+DMYAK G + LA VF ++ ++V W +I G+
Sbjct: 321 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL 380
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI------HGYTVRRFD 309
+G + L EM+ G P+ + + L AC G +K G + HG
Sbjct: 381 HGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQH 440
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+ + V+D+ + G + A M + +S W ++++ IH
Sbjct: 441 Y-----SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 314/553 (56%), Gaps = 15/553 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTY--NSIIIAYSRKESPFEVLGLYNQMIK 69
S+ +I +Y N + A +F + P ++ + N+II + P E Y +M
Sbjct: 74 SITSLINMYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN 132
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
E V PD TF A+KAC+ ++++K +I + G DVF+GS+++N Y+K G M
Sbjct: 133 EGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEH 189
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A VAFE++ +D+V W++M+NG GQ ++ ++RM E + + G++ A
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAV 249
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+GD G +HG++++ + V V SL+DMY K ++ A +F+ M +I +W ++
Sbjct: 250 MGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSI 309
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV---- 305
+S Q G TL LL M G +PD V++ + L AC+ + L G+ IHGY +
Sbjct: 310 VSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGL 369
Query: 306 ----RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ D +++L +VIDMY+KCG A +F++M ++D+ SWN++I YG+HG+G E
Sbjct: 370 GKDGKDID-DVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNE 428
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL +F +M E +KPD TF +LSA SH+G V +GR + M SKY + PT +HY C++
Sbjct: 429 ALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVI 488
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
D+L RAG+++EA ++ +M E VW ALL+ C HK + E A++V +L P+ G
Sbjct: 489 DMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCG 548
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L+SN + ++EEV VR TMR+ ++K PG S +E+ +H F+ D++H +
Sbjct: 549 SYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHS 608
Query: 542 IVYVLKKLYLEMR 554
I L L +R
Sbjct: 609 IYAGLNSLTARLR 621
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 198/397 (49%), Gaps = 33/397 (8%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF-E 135
+T +L+A +L G+EI + G+ N +S++N+Y KC +MN A+ F +
Sbjct: 38 TTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD 97
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++++I+G + NG P E + Y++M+ EG+ D+ I+AC D+ + +
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK- 156
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HG + L LDV + ++LV+ Y K G ++ A F+ + ++V W A+++G+AQ
Sbjct: 157 --KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G LE M P ++ L A +G L G+ IHG+ ++ +D + +
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY KC A +F+ M+ +D+ SWN I++ + G + L L +M+ +
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 375 KPDHSTFASLLSALSH----------------SGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+PD T ++L A SH SGL ++G+ D+++
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKN----------- 383
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G + +A + + MS + +A W ++ G
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMG 419
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 316/531 (59%), Gaps = 3/531 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+ + +R + T+N++I + E L ++++M + V DS T + L CV
Sbjct: 193 ACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQ 252
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D+ G I A++LG D+FV ++++N+Y K G++ A F +M+ +D+V W+S+
Sbjct: 253 LDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSL 312
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ N +P A+ Y +M G+ D + ++ L A+LG+ S+HG+ RR
Sbjct: 313 LAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCW 372
Query: 209 NL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L D+ + +++DMYAK G +D A VF+ + ++++W +LI+G++QNGLA +++
Sbjct: 373 FLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYS 432
Query: 268 EMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKC 325
M+ G P+ + VS L A +Q+G LK G HG ++ F F++ + T ++DMY KC
Sbjct: 433 SMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKC 492
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + A +LF ++ + +SWN II+ +G+HG+G +A+ LF +M VKPDH TF SLL
Sbjct: 493 GKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLL 552
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA SHSGLV+EG++ F LM Y I+P+ KHY CMVDL RAG +E+A V +M P
Sbjct: 553 SACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPD 612
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
++VW ALL C H+ + V+ +LK+ +++G + L+SN +A WE V VR
Sbjct: 613 VSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSL 672
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
R G+KK PG+S +EV+ ++ F +++H + E+I L+ L +M++I
Sbjct: 673 ARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSI 723
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 270/526 (51%), Gaps = 48/526 (9%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-V 72
++I Y DI AR F+++ + V T+NS+I AY+R + +N+ + +
Sbjct: 79 AKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFL 138
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ D TF ++AC +L D G ++ ++LG+ DV++ +S ++ Y + G ++ A
Sbjct: 139 QSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACN 195
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D+ W++MI+G NG+ EA++ + M+ + + D V + L+ C L D
Sbjct: 196 LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H Y+I+ L D+ V +L++MYAK G L A +F M +IV+W +L++
Sbjct: 256 IISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAA 315
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDF 310
F QN L + +M S G PD ++LVS A++G +SIHG+ RR F
Sbjct: 316 FEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLH 375
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM- 369
++ LG ++IDMY+K G AR +F+ + +D+ISWN +I Y +G EA+ ++ M
Sbjct: 376 DIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMR 435
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYAC 419
+ P+ T+ S+L+A S G +++G +FD+ VS C
Sbjct: 436 YYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS-----------TC 484
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK----- 474
+VD+ + G++ +AL + + + ++ W A++S CH + + A K+ K
Sbjct: 485 LVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIIS-CHGLHGYGLK---AVKLFKEMQSE 539
Query: 475 -LNPDDLGIHALVS----NFFAMEQKW-----EEVAGVRKTMRKSG 510
+ PD + +L+S + E +W +E G+R +++ G
Sbjct: 540 GVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYG 585
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 182/364 (50%), Gaps = 30/364 (8%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G +F+ + ++N Y G + A + F+++Q KD+ W+SMI+ G AVD +
Sbjct: 70 GKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCF 129
Query: 166 KR-MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ + +D +I+AC +L D R VH ++ DV + S + Y++
Sbjct: 130 NEFLSTSFLQSDHYTFPPVIRACGNLDDGR---KVHCLVLKLGFECDVYIAASFIHFYSR 186
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G + LA ++F NM +I TW A+ISGF NG LE+ EM+ DSV++ S
Sbjct: 187 FGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSL 246
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L C Q+ + G IH Y ++ +F+L + ++I+MY+K G A +F+QM+ RD+
Sbjct: 247 LPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDI 306
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL----------LSALSHSGL 393
+SWN ++A++ + AL ++ +M V PD T SL LS+ S G
Sbjct: 307 VSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGF 366
Query: 394 VEEGRYWF--DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
V R WF D+ + ++D+ A+ G ++ A K+ + + + ++ W +
Sbjct: 367 VTR-RCWFLHDIALGN-----------AIIDMYAKLGFIDSARKVFEGLPVKDVIS-WNS 413
Query: 452 LLSG 455
L++G
Sbjct: 414 LITG 417
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ L +I+ Y+ G AR FDQ+Q++D+ +WN +I++Y GH A+ F + +
Sbjct: 74 SIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFL 133
Query: 371 ET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
T ++ DH TF ++ A G +++GR +V K + A + +R G
Sbjct: 134 STSFLQSDHYTFPPVIRA---CGNLDDGRK-VHCLVLKLGFECDVYIAASFIHFYSRFGF 189
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
V A + D+M + W A++SG F + KVA+
Sbjct: 190 VSLACNLFDNMMIR-DIGTWNAMISG------FYLNGKVAE 223
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 314/553 (56%), Gaps = 15/553 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTY--NSIIIAYSRKESPFEVLGLYNQMIK 69
S+ +I +Y N + A +F + P ++ + N+II + P E Y +M
Sbjct: 74 SITSLINMYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN 132
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
E V PD TF A+KAC+ ++++K +I + G DVF+GS+++N Y+K G M
Sbjct: 133 EGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEH 189
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A VAFE++ +D+V W++M+NG GQ ++ ++RM E + + G++ A
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAV 249
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+GD G +HG++++ + V V SL+DMY K ++ A +F+ M +I +W ++
Sbjct: 250 MGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSI 309
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV---- 305
+S Q G TL LL M G +PD V++ + L AC+ + L G+ IHGY +
Sbjct: 310 VSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGL 369
Query: 306 ----RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ D +++L +VIDMY+KCG A +F++M ++D+ SWN++I YG+HG+G E
Sbjct: 370 GKDGKDID-DVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNE 428
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL +F +M E +KPD TF +LSA SH+G V +GR + M SKY + PT +HY C++
Sbjct: 429 ALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVI 488
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
D+L RAG+++EA ++ +M E VW ALL+ C HK + E A++V +L P+ G
Sbjct: 489 DMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCG 548
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L+SN + ++EEV VR TMR+ ++K PG S +E+ +H F+ D++H +
Sbjct: 549 SYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHS 608
Query: 542 IVYVLKKLYLEMR 554
I L L +R
Sbjct: 609 IYAGLNSLTARLR 621
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 198/397 (49%), Gaps = 33/397 (8%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF-E 135
+T +L+A +L G+EI + G+ N +S++N+Y KC +MN A+ F +
Sbjct: 38 TTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD 97
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++++I+G + NG P E + Y++M+ EG+ D+ I+AC D+ + +
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK- 156
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HG + L LDV + ++LV+ Y K G ++ A F+ + ++V W A+++G+AQ
Sbjct: 157 --KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G LE M P ++ L A +G L G+ IHG+ ++ +D + +
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY KC A +F+ M+ +D+ SWN I++ + G + L L +M+ +
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 375 KPDHSTFASLLSALSH----------------SGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+PD T ++L A SH SGL ++G+ D+++
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKN----------- 383
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G + +A + + MS + +A W ++ G
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMG 419
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 308/527 (58%), Gaps = 28/527 (5%)
Query: 56 SPFE-----VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
SPFE L Y M K D+ DS LKAC + +MG+EI +V+ G +D
Sbjct: 84 SPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSD 143
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV--FNGQPREAVDAYK-- 166
VFV ++++ +Y +CG + A + F+KM +D+V WS+MI + F G + ++ ++
Sbjct: 144 VFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203
Query: 167 ------------------RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
RM +E + +++ M+ LI +C +G + G +H Y +R
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF 263
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + + T+LVDMY K G + A +F +M +++TW A+IS +AQ +L ++
Sbjct: 264 GMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQ 323
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G P+ +++VS L CA G L +GK H Y ++ + +++L T++IDMY+KCG
Sbjct: 324 MRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGD 383
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S A+ LF + RD+ +WNV++A YG+HG+GE+AL LF +M VKP+ TF L A
Sbjct: 384 ISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHA 443
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+GLV EG+ F+ M+ + + P +HY CMVDLL RAG ++EA K+++SM P +A
Sbjct: 444 CSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIA 503
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
+W A+L+ C HK ++GE A+++L L P + G L+SN +A +W +VAG+RK ++
Sbjct: 504 IWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVK 563
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+G+KK PG S +EVNG +H F M D +H E I +L ++ +++
Sbjct: 564 DTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLK 610
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 185/371 (49%), Gaps = 29/371 (7%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS-------------------- 52
V ++ +Y +VSAR LF+++ R V +++++I AY
Sbjct: 147 VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAG 206
Query: 53 --RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
R E L+ +MI+E+V P+ T + +C + +++G+ + + G+G
Sbjct: 207 YIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
+ + ++++++Y KCG++ A F+ M+ KD++ W++MI+ A + +M+
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
G+ +E+ M+ L+ CA G G H Y ++ + +DV ++T+L+DMYAK G +
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A +F +I TW +++G+ +G L+L EM++ G +P+ ++ + AL AC+
Sbjct: 387 AQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSH 446
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQ-SRDLIS 345
G + GK + + DF LV ++D+ + G+ A + + M + ++
Sbjct: 447 AGLVVEGKGLFEKMIH--DFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAI 504
Query: 346 WNVIIASYGIH 356
W ++A+ IH
Sbjct: 505 WGAMLAACKIH 515
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 17/272 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG +I SAR +F+ + + V T+ ++I AY++ L+ QM VRP+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L C L MG+ + G DV + ++++++Y KCG ++ A F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+ W+ M+ G +G +A+ + M+ G+ +++ +G + AC S
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHAC-----SHA 447
Query: 196 GLSVHGYSIRRHLNLD------VKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
GL V G + + D V+ +VD+ + G LD A + ++M NI WGA
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGA 507
Query: 249 LISG--FAQNGLAG--STLELL-MEMQSCGFE 275
+++ +N G + ELL +E Q+CG++
Sbjct: 508 MLAACKIHKNSNMGELAARELLALEPQNCGYK 539
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 312/548 (56%), Gaps = 4/548 (0%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A G ++ ++ A G D R++FE+L R + +N++I + + E +Y+QM
Sbjct: 381 AVGTALVKMYAKCGSYKD---CRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM 437
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+E + P+ T+ + L ACV+ L G EI + V+ G+ D+ V ++++++Y +CG +
Sbjct: 438 QREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSI 497
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+A + F KM RKD++ W++MI GL +G EA+ ++ M++ G+ + V ++ AC
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ +G +H I L D V +LV+MY+ G + A VF M++ +IV +
Sbjct: 558 SSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYN 617
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+I G+A + L L+L +Q G +PD V+ ++ L ACA G L+ K IH ++
Sbjct: 618 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD 677
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + LG +++ Y+KCG S A +FD+M R++ISWN II HG G++ L LF
Sbjct: 678 GYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLF 737
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M +KPD TF SLLSA SH+GL+EEGR +F M + I PT +HY CMVDLL R
Sbjct: 738 ERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGR 797
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG+++E ++ +M + +W ALL C H + E+ A+ LKL+PD+ ++ +
Sbjct: 798 AGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVAL 857
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
S+ +A W+ A +RK M + G+ K PG S +EV +LH F+ ED+SH + E I L
Sbjct: 858 SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAEL 917
Query: 547 KKLYLEMR 554
KL M+
Sbjct: 918 DKLTHAMK 925
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 241/455 (52%), Gaps = 9/455 (1%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS---RKESPFEVLGLYNQM 67
N I+ +Y I AR++F+++ + V ++ II Y+ E FE+ + +M
Sbjct: 280 NVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEI---FQKM 336
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+E V P+ T+ L A LK G+ + + G+ +D+ VG++++ +Y KCG
Sbjct: 337 QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSY 396
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+ FEK+ +DL+ W++MI GL G EA + Y +M++EG+ +++ + L+ AC
Sbjct: 397 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ +G +H ++ D+ VQ +L+ MYA+ G + A +F M R +I++W
Sbjct: 457 VNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWT 516
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+I G A++GL L + +MQ G +P+ V+ S L AC+ L G+ IH +
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA 576
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + ++++MYS CG AR +FD+M RD++++N +I Y H G+EAL LF
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLF 636
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++ E +KPD T+ ++L+A ++SG +E + L++ + T A +V A+
Sbjct: 637 DRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNA-LVSTYAK 695
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
G +AL + D M + + W A++ GC H +
Sbjct: 696 CGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHGR 729
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 244/473 (51%), Gaps = 10/473 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEEL--PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
+V +I +Y I AR+++ +L R V ++N++++ Y + E L L +M +
Sbjct: 178 TVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQ 237
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ +T L +C S L+ G EI +A++ DV V + +LN+Y KCG ++E
Sbjct: 238 HGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHE 297
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+KM+ K +V W+ +I G G A + +++M++EG+ + + + ++ A +
Sbjct: 298 AREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSG 357
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
++G +VH + + D+ V T+LV MYAK G VF+ + +++ W +
Sbjct: 358 PAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 417
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I G A+ G E+ +MQ G P+ ++ V L AC L G+ IH V+ F
Sbjct: 418 IGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGF 477
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
F++ + ++I MY++CG AR LF++M +D+ISW +I G G EAL++F
Sbjct: 478 MFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQD 537
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARA 427
M + +KP+ T+ S+L+A S ++ GR ++ T+ H A +V++ +
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAG--LATDAHVANTLVNMYSMC 595
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
G V++A ++ D M T+ + + A++ G H ++G++ K +L + L
Sbjct: 596 GSVKDARQVFDRM-TQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGL 644
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 219/462 (47%), Gaps = 39/462 (8%)
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
++ R +S + LK C+ + DL G E+ ++ D + ++++N+Y++CG +
Sbjct: 134 QQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIE 193
Query: 129 EAMVAFEKMQRKDLVC--WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
EA + K+ + W++M+ G V G EA+ + M++ G+ M L+ +
Sbjct: 194 EARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSS 253
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C G +H +++ L DV V +++MYAK G + A VF M ++V+W
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSW 313
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+I G+A G + E+ +MQ G P+ ++ ++ L A + LK GK++H + +
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILN 373
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ +L +GT+++ MY+KCG R +F+++ +RDLI+WN +I G+ EEA +
Sbjct: 374 AGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEI 433
Query: 366 FLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTE 414
+ QM + P+ T+ LL+A HS +V++G + FD+ V I
Sbjct: 434 YHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDG-FMFDISVQNALISMYA 492
Query: 415 K--------------------HYACMVDLLARAGEVEEALKIVDSMST---EPGLAVWVA 451
+ + M+ LA++G EAL + M +P + +
Sbjct: 493 RCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552
Query: 452 LLSGCHNHKKFSIGEKVAKKVLKLN-PDDLGIHALVSNFFAM 492
+L+ C + G ++ ++V++ D + + N ++M
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSM 594
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 47/363 (12%)
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
G+ R A+D + ++++G + M +++ C ++ D G VH + I+ LD
Sbjct: 118 TITGKDR-AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQ 176
Query: 213 KVQTSLVDMYAKTGHLDLASHVFK--NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+L++MY + G ++ A V+ N + + +W A++ G+ Q G L+LL EMQ
Sbjct: 177 YTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQ 236
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
G + + L +C L+ G+ IH ++ R F++ + +++MY+KCG
Sbjct: 237 QHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIH 296
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR +FD+M+++ ++SW +II Y GH E A +F +M + V P+ T+ ++L+A S
Sbjct: 297 EAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
Query: 390 -----------HSGLVEEG------------------------RYWFDLMVSKYKIQPTE 414
HS ++ G R F+ +V++ I
Sbjct: 357 GPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA--- 413
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKK 471
+ M+ LA G EEA +I M E P +V LL+ C N G ++ +
Sbjct: 414 --WNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSR 471
Query: 472 VLK 474
V+K
Sbjct: 472 VVK 474
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 150/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L+ + ++ +Y + AR++F+ + R + YN++I Y+ E
Sbjct: 573 VIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEA 632
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L++++ +E ++PD T+ L AC + L+ +EI ++ GY +D +G+++++
Sbjct: 633 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVST 692
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++A++ F+KM +++++ W+++I G +G+ ++ + ++RMK EGI D V
Sbjct: 693 YAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTF 752
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ L+ AC+ G G + S+ R + ++ +VD+ + G LD + K M
Sbjct: 753 VSLLSACSHAGLLEEGRR-YFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTM 811
Query: 239 S-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
+ N WGAL+ +G E E S +PD+ ++ AL
Sbjct: 812 PFQANTRIWGALLGACRIHGNV-PVAERAAE-SSLKLDPDNAAVYVAL 857
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 308/542 (56%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
+I LY + A K+F E P + V + SII Y + SP L +++M+ E V P
Sbjct: 146 LIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSP 205
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T A AC L D +G + G+ + + +S+LNLY K G + A F
Sbjct: 206 DPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLF 265
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+M KD++ WSSM+ NG A++ + M + I+ + V ++ ++ACA +
Sbjct: 266 REMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE 325
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ LD+ V T+L+DMY K A +F M + ++V+W L SG+A
Sbjct: 326 EGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYA 385
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+ G+A +L + M S G PD+++LV L A +++G ++ +H + + FD N
Sbjct: 386 EIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEF 445
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-T 372
+G S+I++Y+KC A +F M+ +D+++W+ IIA+YG HG GEEAL LF QM +
Sbjct: 446 IGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHS 505
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF S+LSA SH+GL+EEG F +MV++Y++ P +HY MVDLL R GE+++
Sbjct: 506 DVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDK 565
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL +++ M + G VW ALL C H+ IGE A + L+P+ G + L+SN + +
Sbjct: 566 ALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCV 625
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ W + A +R ++++ KK+ G S+VE+ E+H+FI D+ H + + I +L+KL
Sbjct: 626 DKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLDAR 685
Query: 553 MR 554
M+
Sbjct: 686 MK 687
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 267/497 (53%), Gaps = 16/497 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L+ V ++ LY + A KLFEE P + V +N+++ +Y + E L
Sbjct: 28 LKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETL 87
Query: 62 GLYNQMIKEDV---RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L++QM + + RPD+ T ++ALK+C L L++G+ I + ND+FVGS+++
Sbjct: 88 SLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALI 147
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADE 177
LY KCG+MN+A+ F + ++D+V W+S+I G NG P A+ + RM E + D
Sbjct: 148 ELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDP 207
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V ++ ACA L D G SVHG+ RR + + + S++++Y KTG + A+++F+
Sbjct: 208 VTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFRE 267
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M +I++W ++++ +A NG + L L EM E + V+++SAL ACA L+ G
Sbjct: 268 MPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEG 327
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K IH V F+ ++ + T+++DMY KC P A LF++M +D++SW V+ + Y
Sbjct: 328 KHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEI 387
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G ++L +F M+ +PD +L+A S G+V++ VSK E
Sbjct: 388 GMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQA-LCLHAFVSKSGFDNNEFI 446
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
A +++L A+ ++ A K+ M + + W ++++ H + GE+ K +++
Sbjct: 447 GASLIELYAKCSSIDNANKVFKGMRRK-DVVTWSSIIAAYGFHGQ---GEEALKLFYQMS 502
Query: 477 ------PDDLGIHALVS 487
P+D+ +++S
Sbjct: 503 NHSDVKPNDVTFVSILS 519
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 193/378 (51%), Gaps = 10/378 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C S + + ++ + +++G +D FV + + LY + + A FE+ K +
Sbjct: 11 LETCCSKISIP---QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGID---ADEVVMMGLIQACADLGDSRFGLSV 199
W++++ G+ E + + +M + I D + +++C+ L G +
Sbjct: 68 YLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMI 127
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG+ ++ ++ D+ V ++L+++Y+K G ++ A VF + ++V W ++I+G+ QNG
Sbjct: 128 HGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSP 187
Query: 260 GSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L M PD V+LVSA ACAQ+ LG+S+HG+ RR FD L L S
Sbjct: 188 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 247
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++++Y K G A LF +M +D+ISW+ ++A Y +G AL+LF +MI+ ++ +
Sbjct: 248 ILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 307
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T S L A + S +EEG++ L V+ Y + ++D+ + + A+ +
Sbjct: 308 RVTVISALRACASSSNLEEGKHIHKLAVN-YGFELDITVSTALMDMYMKCFSPKNAIDLF 366
Query: 438 DSMSTEPGLAVWVALLSG 455
+ M + + W L SG
Sbjct: 367 NRMPKK-DVVSWAVLFSG 383
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 315/552 (57%), Gaps = 5/552 (0%)
Query: 7 SAYG--NSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S +G NSVG ++A Y + SARK+F+E+ R V ++NSII Y + L +
Sbjct: 73 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 132
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ QM+ + D +T C + +G + V+ + + +++L++Y K
Sbjct: 133 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 192
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG ++ A F +M + +V ++SMI G G EAV ++ M++EGI D + +
Sbjct: 193 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 252
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CA G VH + L D+ V +L+DMYAK G + A VF M +I
Sbjct: 253 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 312
Query: 244 VTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W +I G+++N A L L + ++ F PD ++ L ACA + G+ IHG
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372
Query: 303 YTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
Y +R F + + S++DMY+KCG A LFD + S+DL+SW V+IA YG+HG G+E
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A++LF QM + ++ D +F SLL A SHSGLV+EG +F++M + KI+PT +HYAC+V
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 492
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
D+LAR G++ +A + +++M P +W ALL GC H + EKVA+KV +L P++ G
Sbjct: 493 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 552
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L++N +A +KWE+V +RK + + G++K PG S +E+ G ++ F+ D S+ + E+
Sbjct: 553 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 612
Query: 542 IVYVLKKLYLEM 553
I L+K+ M
Sbjct: 613 IEAFLRKVRARM 624
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 232/427 (54%), Gaps = 8/427 (1%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
F+E+ + +N ++ ++ +GL+ +M+ V DS TF+ K+ SL +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
GE++ ++ G+G VG+S++ Y+K +++ A F++M +D++ W+S+ING
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
V NG + + + +M GI+ D ++ + CAD G +VH ++ + +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
+ +L+DMY+K G LD A VF+ MS ++V++ ++I+G+A+ GLAG ++L EM+
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCA 331
G PD ++ + L CA+ L GK +H + F++ + +++DMY+KCG A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKPDHSTFASLLSALSH 390
+F +M+ +D+ISWN II Y + + EALSLF L + E PD T A +L A +
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 391 SGLVEEGRYWFD-LMVSKYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
++GR +M + Y +++H A +VD+ A+ G + A + D ++++ L
Sbjct: 361 LSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD-LVS 416
Query: 449 WVALLSG 455
W +++G
Sbjct: 417 WTVMIAG 423
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 5/299 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K S ++ +Y D+ SA+ +F E+ R V +Y S+I Y+R+ E +
Sbjct: 172 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 231
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI--WRKAVELGYGNDVFVGSSMLN 119
L+ +M +E + PD T T L C L G+ + W K +LG+ D+FV +++++
Sbjct: 232 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALMD 289
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEV 178
+Y KCG M EA + F +M+ KD++ W+++I G N EA+ + + +E DE
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 349
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++ ACA L G +HGY +R D V SLVDMYAK G L LA +F ++
Sbjct: 350 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 409
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++V+W +I+G+ +G + L +M+ G E D +S VS L AC+ G + G
Sbjct: 410 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 322/558 (57%), Gaps = 15/558 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP- 74
+I LY +V+AR LF+E+P R + ++N++I Y + + E L L + +R
Sbjct: 191 LIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAM 245
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS T L AC D G I +++ G +++FV + +++LY + G + + F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DL+ W+S+I N QP A+ ++ M+ I D + ++ L + LG+ R
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIR 365
Query: 195 FGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
SV G+++R+ L D+ + ++V MYAK G +D A VF + ++++W +ISG+
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGY 425
Query: 254 AQNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
AQNG A +E+ +ME + + + VS L AC+Q G L+ G +HG ++
Sbjct: 426 AQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 485
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +GTS+ DMY KCG A +LF Q+ + + WN +IA +G HGHGE+A+ LF +M+
Sbjct: 486 DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ VKPDH TF +LLSA SHSGLV+EG + F++M + Y I P+ KHY CMVDL RAG++
Sbjct: 546 DEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQL 605
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
E AL + SM +P ++W ALLS C H +G+ ++ + ++ P+ +G H L+SN +
Sbjct: 606 EIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 665
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A KWE V +R G++K PG+S +EV+ ++ F +++H YE++ L L+
Sbjct: 666 ASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALH 725
Query: 551 LEMRAISSWLQGHMEEHE 568
+++ + G++ +H
Sbjct: 726 EKLKMV-----GYVPDHR 738
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 218/390 (55%), Gaps = 14/390 (3%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ-MIKEDV 72
+++ LY ++ AR F+ + R V +N +I Y R EV+ ++ M+ +
Sbjct: 90 AKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGL 149
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD TF LKAC ++ D G +I A++ G+ DV+V +S+++LY + G + A +
Sbjct: 150 QPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARI 206
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLG 191
F++M +D+ W++MI+G +G +EA+ +G+ A D V ++ L+ AC + G
Sbjct: 207 LFDEMPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAG 261
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D G+++H YSI+ L ++ V L+D+YA+ G L VF M ++++W ++I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIK 321
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF- 310
+ N + L EM+ +PD ++L+S +Q+G ++ +S+ G+T+R+ F
Sbjct: 322 AYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFL 381
Query: 311 -NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++ +G +V+ MY+K G+ ARA+F+ + ++D+ISWN II+ Y +G EA+ ++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 370 IET--MVKPDHSTFASLLSALSHSGLVEEG 397
E + + T+ S+L A S +G + +G
Sbjct: 442 EEEGGEISANQGTWVSVLPACSQAGALRQG 471
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 186/403 (46%), Gaps = 45/403 (11%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-M 168
+V + + ++NLY G + A F+ + +D+ W+ MI+G G E + + M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFM 144
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
G+ D +++AC ++ D G +H +++ DV V SL+ +Y + G +
Sbjct: 145 LSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAV 201
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
A +F M ++ +W A+ISG+ Q+G A L L +++ DSV++VS L AC
Sbjct: 202 VNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRA----MDSVTVVSLLSAC 257
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ G G +IH Y+++ + L + +ID+Y++ G + +FD+M RDLISWN
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWN 317
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY-------- 399
II +Y ++ A+ LF +M + ++PD T SL S LS G + R
Sbjct: 318 SIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRK 377
Query: 400 -WF--DLMVSK------------------YKIQPTEK--HYACMVDLLARAGEVEEALKI 436
WF D+ + + P + + ++ A+ G EA+++
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEM 437
Query: 437 VDSMSTEPG-----LAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ M E G WV++L C G K+ ++LK
Sbjct: 438 YNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLK 480
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 163/342 (47%), Gaps = 37/342 (10%)
Query: 161 AVDAYKRMKKEGIDADEVV-MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+ +A + K G ++ E+ + L + C +L ++ +H + + +V + LV
Sbjct: 37 SANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAK---CLHARLVVSNAIQNVCISAKLV 93
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDS 278
++Y G++ LA + F ++ ++ W +ISG+ + G + + + M S G +PD
Sbjct: 94 NLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDY 153
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+ S L AC + G IH ++ F +++ + S+I +Y + G AR LFD+
Sbjct: 154 RTFPSVLKACRNV---TDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDE 210
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M +RD+ SWN +I+ Y G+ +EAL+L + + D T SLLSA + +G G
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNAKEALTL----SDGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 398 RYWFDLMVSKYKIQ---PTEKHYAC-MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ + Y I+ +E + ++DL A G +++ K+ D M L W +++
Sbjct: 267 -----VTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRD-LISWNSII 320
Query: 454 SGCHNHKKFSIGEKVAKKVL--------KLNPDDLGIHALVS 487
K + + E+ + +L ++ PD L + +L S
Sbjct: 321 ------KAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLAS 356
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 315/552 (57%), Gaps = 5/552 (0%)
Query: 7 SAYG--NSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S +G NSVG ++A Y + SARK+F+E+ R V ++NSII Y + L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ QM+ + D +T C + +G + V+ + + +++L++Y K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG ++ A F +M + +V ++SMI G G EAV ++ M++EGI D + +
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CA G VH + L D+ V +L+DMYAK G + A VF M +I
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 244 VTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W +I G+++N A L L + ++ F PD ++ L ACA + G+ IHG
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 303 YTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
Y +R F + + S++DMY+KCG A LFD + S+DL+SW V+IA YG+HG G+E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A++LF QM + ++ D +F SLL A SHSGLV+EG +F++M + KI+PT +HYAC+V
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
D+LAR G++ +A + +++M P +W ALL GC H + EKVA+KV +L P++ G
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 703
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L++N +A +KWE+V +RK + + G++K PG S +E+ G ++ F+ D S+ + E+
Sbjct: 704 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 763
Query: 542 IVYVLKKLYLEM 553
I L+K+ M
Sbjct: 764 IEAFLRKVRARM 775
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 239/441 (54%), Gaps = 8/441 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y D+ A ++F+E+ + +N ++ ++ +GL+ +M+ V DS T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F+ K+ SL + GE++ ++ G+G VG+S++ Y+K +++ A F++M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D++ W+S+ING V NG + + + +M GI+ D ++ + CAD G +
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH ++ + + + +L+DMY+K G LD A VF+ MS ++V++ ++I+G+A+ GL
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
AG ++L EM+ G PD ++ + L CA+ L GK +H + F++ + +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKP 376
++DMY+KCG A +F +M+ +D+ISWN II Y + + EALSLF L + E P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYA-CMVDLLARAGEVEEAL 434
D T A +L A + ++GR +M + Y +++H A +VD+ A+ G + A
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAH 554
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
+ D ++++ L W +++G
Sbjct: 555 MLFDDIASKD-LVSWTVMIAG 574
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 5/299 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K S ++ +Y D+ SA+ +F E+ R V +Y S+I Y+R+ E +
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI--WRKAVELGYGNDVFVGSSMLN 119
L+ +M +E + PD T T L C L G+ + W K +LG+ D+FV +++++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALMD 440
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEV 178
+Y KCG M EA + F +M+ KD++ W+++I G N EA+ + + +E DE
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++ ACA L G +HGY +R D V SLVDMYAK G L LA +F ++
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++V+W +I+G+ +G + L +M+ G E D +S VS L AC+ G + G
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 204/420 (48%), Gaps = 28/420 (6%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T L+ C LK G+E+ G+ D +GS + +Y CG + EA F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++++ + + W+ ++N L +G ++ +K+M G++ D + ++ + L
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ V SLV Y K +D A VF M+ ++++W ++I+G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
NGLA L + ++M G E D ++VS CA + LG+++H V+ F
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++DMYSKCG A+A+F +M R ++S+ +IA Y G EA+ LF +M E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRY---W-------FDLMVSKYKIQPTEKHYACMVDL 423
+ PD T ++L+ + L++EG+ W FD+ VS ++D+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN-----------ALMDM 441
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CHNHKKFSIGEKVAKKVLKLNPDD 479
A+ G ++EA + M + ++ W ++ G C+ ++ S+ + ++ + +PD+
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSKNCYANEALSLFNLLLEEK-RFSPDE 499
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 153/349 (43%), Gaps = 37/349 (10%)
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D D + ++Q CAD + G V + +D + + L MY G L AS
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF + + W L++ A++G ++ L +M S G E DS + + + +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ G+ +HG+ ++ F +G S++ Y K AR +FD+M RD+ISWN II
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL--------- 403
Y +G E+ LS+F+QM+ + ++ D +T S+ + + S L+ GR +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 404 ---------MVSKYKIQPTEK------------HYACMVDLLARAGEVEEALKIVDSMST 442
M SK + K Y M+ AR G EA+K+ + M
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 443 E---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
E P + A+L+ C ++ G++V + + +DLG VSN
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDLGFDIFVSN 436
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 321/585 (54%), Gaps = 46/585 (7%)
Query: 16 IIALYGGKNDIVSARKLFEEL-------PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
II+ Y A K F E+ P V ++ ++I + FE L ++ +M+
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKP--NVVSWTALIAGSEQNGYDFEALSVFRKMV 354
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKM 127
E V+P+S T A+ AC +L L+ G EI +++ +D+ VG+S+++ Y KC +
Sbjct: 355 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 414
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ-- 185
A F +++ DLV W++M+ G G EA++ MK +GI+ D + GL+
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474
Query: 186 ---------------------------------ACADLGDSRFGLSVHGYSIRRHLNLDV 212
AC + + + G +HGY +R H+ L
Sbjct: 475 TQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELST 534
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
V ++L+ MY+ L++A VF +S ++V W ++IS AQ+G + + L+LL EM
Sbjct: 535 GVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCA 331
E ++V++VSAL AC+++ L+ GK IH + +R D + S+IDMY +CG +
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 654
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
R +FD M RDL+SWNV+I+ YG+HG G +A++LF Q +KP+H TF +LLSA SHS
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHS 714
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
GL+EEG +F +M ++Y + P + YACMVDLL+RAG+ E L+ ++ M EP AVW +
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774
Query: 452 LLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM 511
LL C H + E A+ + +L P G + L++N ++ +WE+ A +R M++ G+
Sbjct: 775 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 834
Query: 512 KKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
K PG S +EV +LH+F++ D SH E I ++ LY +++ I
Sbjct: 835 TKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEI 879
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 42/385 (10%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R++ +Y + AR++F+++ R V ++ +I+ Y E + L+ M+ E VRP
Sbjct: 129 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 188
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D F KAC L + ++G++++ + +G+ + V S+L++++KCG+M+ A F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+++ KD+ W+ M++G G+ ++A+ MK G+ D+V +I
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-------- 300
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-----RINIVTWGAL 249
YA++G + AS F M + N+V+W AL
Sbjct: 301 ---------------------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--R 307
I+G QNG L + +M G +P+S+++ SA+ AC + L+ G+ IHGY ++
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
D +L++G S++D Y+KC AR F ++ DL+SWN ++A Y + G EEA+ L
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 368 QMIETMVKPDHSTFASLLSALSHSG 392
+M ++PD T+ L++ + G
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYG 478
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 163/346 (47%), Gaps = 10/346 (2%)
Query: 174 DADEVVMM--GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
+ DE + + ++Q C L + R G VH + +++ + + L+++Y +TG ++ A
Sbjct: 84 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
+F MS N+ +W A++ + G T++L M + G PD AC+++
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
Query: 292 GFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
++GK ++ Y + F+ N + S++DM+ KCG AR F++++ +D+ WN+++
Sbjct: 204 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 263
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ Y G ++AL M + VKPD T+ +++S + SG EE +F M
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF 323
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEK 467
+P + ++ + G EAL + M E P + +S C N G +
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
+ +K+ ++L LV N ++ + + V RK GM K
Sbjct: 384 IHGYCIKV--EELDSDLLVGN--SLVDYYAKCRSVEVARRKFGMIK 425
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L + +I +YG I +R++F+ +P R + ++N +I Y +
Sbjct: 626 IIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDA 685
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
+ L+ Q ++P+ TFT L AC + EE W+ K ++ Y D V +
Sbjct: 686 VNLFQQFRTMGLKPNHITFTNLLSACSH---SGLIEEGWKYFKMMKTEYAMDPAVEQYAC 742
Query: 117 MLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQP 158
M++L + G+ NE + EKM + W S++ + P
Sbjct: 743 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP 785
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 317/555 (57%), Gaps = 11/555 (1%)
Query: 7 SAYG--NSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S +G NSVG ++A Y + + SARK+F+E+ R V ++NSII Y + L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ QM+ + D +T C + +G + V+ + + +++L++Y K
Sbjct: 284 FVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSK 343
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG ++ A V F +M + +V ++SMI G G EAV ++ M++EGI D + +
Sbjct: 344 CGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CA G VH + + D+ V +L+DMYAK G + A VF M +I
Sbjct: 404 LNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDI 463
Query: 244 VTWGALISGFAQNGLAGSTLEL----LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++W +I G+++N A L L L+E + F PD ++ L ACA + G+
Sbjct: 464 ISWNTVIGGYSKNCYANEALSLFNLLLVEKR---FSPDERTVACVLPACASLSAFDKGRE 520
Query: 300 IHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHGY +R F + + S++DMY+KCG AR LFD + S+DL+SW V+IA YG+HG
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGF 580
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+EA++LF QM + ++PD +F SLL A SHSGLV+EG +F++M + KI+PT +HYA
Sbjct: 581 GKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
C+VD+LAR G + +A + +++M P +W ALL GC H + E+VA+KV +L P+
Sbjct: 641 CIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPE 700
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L++N +A +KWEEV +RK + + G++K PG S +E+ G ++ F+ D S+ +
Sbjct: 701 NTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 539 YEDIVYVLKKLYLEM 553
E I L+ + M
Sbjct: 761 TEKIEAFLRGVRARM 775
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 264/494 (53%), Gaps = 13/494 (2%)
Query: 1 MIKTNLSAYGNSVGRIIAL-YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
I+ N +++G +AL Y D+ A ++F+++ + +N ++ ++
Sbjct: 119 FIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSG 178
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+GL+ +M+ V DS TF+ K+ SL + GE++ ++ G+G VG+S++
Sbjct: 179 SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVA 238
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y+K +++ A F++M +D++ W+S+ING V NG + + + +M GI+ D
Sbjct: 239 FYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLAT 298
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ + CAD G +VH + ++ + + + +L+DMY+K G LD A VF+ MS
Sbjct: 299 IVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMS 358
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V++ ++I+G+A+ GLAG ++L EM+ G PD ++ + L CA+ L GK
Sbjct: 359 GRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKR 418
Query: 300 IHGYTVRRFD--FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + ++ D F++ + +++DMY+KCG A +F +M+ +D+ISWN +I Y +
Sbjct: 419 VHEW-IKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477
Query: 358 HGEEALSLF-LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEK 415
+ EALSLF L ++E PD T A +L A + ++GR +M + Y +++
Sbjct: 478 YANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDR 534
Query: 416 HYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKV 472
H A +VD+ A+ G + A + D + T L W +++ G H K +I +
Sbjct: 535 HVANSLVDMYAKCGALLLARLLFDDI-TSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Query: 473 LKLNPDDLGIHALV 486
+ PD++ +L+
Sbjct: 594 AGIEPDEISFVSLL 607
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 12/363 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K S ++ +Y D+ SA+ +F E+ R V +Y S+I Y+R+ E +
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAV 382
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI--WRKAVELGYGNDVFVGSSMLN 119
L+ +M +E + PD T T L C L G+ + W K ++G+ D+FV +++++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGF--DIFVSNALMD 440
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEV 178
+Y KCG M EA + F +M+ KD++ W+++I G N EA+ + + E DE
Sbjct: 441 MYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDER 500
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++ ACA L G +HGY +R D V SLVDMYAK G L LA +F ++
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDI 560
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ ++V+W +I+G+ +G + L +M+ G EPD +S VS L AC+ G + G
Sbjct: 561 TSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGW 620
Query: 299 SIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASY 353
+ + R + + ++DM ++ G S A + M D W ++
Sbjct: 621 RF--FNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGC 678
Query: 354 GIH 356
IH
Sbjct: 679 RIH 681
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 196/405 (48%), Gaps = 27/405 (6%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T L+ C LK G+E+ G+ D +GS + +Y CG + EA F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++++ + + W+ ++N L +G ++ +K+M G++ D + ++ + L
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY ++ V SLV Y K +D A VF M+ ++++W ++I+G+
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
NGLA L + ++M G E D ++VS CA + LG+++H + V+ F
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++DMYSKCG A+ +F +M R ++S+ +IA Y G EA+ LF +M E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRY---W-------FDLMVSKYKIQPTEKHYACMVDL 423
+ PD T ++L+ + + L++EG+ W FD+ VS ++D+
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN-----------ALMDM 441
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CHNHKKFSI 464
A+ G + EA + M + ++ W ++ G C+ ++ S+
Sbjct: 442 YAKCGSMREAELVFSEMRVKDIIS-WNTVIGGYSKNCYANEALSL 485
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 37/349 (10%)
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D D + ++Q CAD + G V + LD + + L MY G L AS
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF + + W L++ A++G ++ L +M S G E DS + + + +
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ G+ +HGY ++ F +G S++ Y K AR +FD+M RD+ISWN II
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR--YWFDL------- 403
Y +G E+ LS+F+QM+ + ++ D +T S+ + + S L+ GR + F +
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330
Query: 404 ---------MVSKYKIQPTEK------------HYACMVDLLARAGEVEEALKIVDSMST 442
M SK + K Y M+ AR G EA+K+ + M
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 443 E---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
E P + A+L+ C ++ G++V + + +D+G VSN
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI---KENDMGFDIFVSN 436
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/567 (36%), Positives = 315/567 (55%), Gaps = 9/567 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
++ +Y + A+ LF + R + +N++I A+S + + QM + V
Sbjct: 148 LLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVT 207
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+SST L L G+ I + + ++V + +++L++Y KC + A
Sbjct: 208 PNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKI 267
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGD 192
F + +K+ VCWS+MI G V + +A+ Y M G++ + +++ACA L D
Sbjct: 268 FNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTD 327
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G +H + I+ ++LD V SL+ MYAK G +D A M + V++ A+ISG
Sbjct: 328 LKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISG 387
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
QNG A L + +MQS G P ++++ L AC+ + L+ G HGYTV R F +
Sbjct: 388 CVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTND 447
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++IDMYSKCG + +R +FD+MQ+RD+ISWN +I YGIHG EALSLF ++
Sbjct: 448 TSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQA 507
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+KPD T ++LSA SHSGLV EG+YWF M + I+P HY CMVDLLARAG ++
Sbjct: 508 LGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLD 567
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + M P + +W ALL+ C HK +GE+V+KK+ L P+ G L+SN ++
Sbjct: 568 EAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYS 627
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W++ A +R R G KK PG S VE++G +H FI +SH Q I L++L +
Sbjct: 628 SVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLV 687
Query: 552 EM-----RAISSWLQGHMEEHEEHDPL 573
+M RA SS++ +EE E+ L
Sbjct: 688 QMKKLGYRADSSFVLHDVEEEEKEQIL 714
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 247/474 (52%), Gaps = 14/474 (2%)
Query: 23 KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE-VLGLYNQMIKEDVRPDSSTFTV 81
+N+I AR +F+++P V +N +I Y+ PF+ + LY M++ V P + TF
Sbjct: 54 RNEIQLARHVFDQIPKPSVVLWNMMIRTYAW-SGPFQQSIYLYLHMLQLGVTPTNFTFPF 112
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM--QR 139
LKAC SL L++G I A LG D++V +++L++Y KCG + +A F + Q
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+D+V W++MI F+ + + + +M++ G+ + ++ ++ G ++
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H Y IR +V +QT+L+DMYAK L A +F +++ N V W A+I G+ +
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292
Query: 260 GSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L L +M G P +L + L ACAQ+ LK GK +H + ++ D + +G S
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+I MY+KCG+ A D+M ++D +S++ II+ +G+ E+AL +F QM + + P
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T +LL A SH ++ G V + T A ++D+ ++ G++ + +I
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNA-IIDMYSKCGKITISREIF 471
Query: 438 DSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALVS 487
D M ++ W ++ G H + S+ +++ + L L PDD+ + A++S
Sbjct: 472 DRMQNRDIIS-WNTMIIGYGIHGLCVEALSLFQEL--QALGLKPDDVTLIAVLS 522
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 134/261 (51%), Gaps = 16/261 (6%)
Query: 1 MIKTNL---SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIK+ + + GNS +I++Y + +A +E+ + +Y++II +
Sbjct: 338 MIKSGMDLDTTVGNS---LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYA 394
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ L ++ QM + P T L AC L L+ G V G+ ND + +++
Sbjct: 395 EKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAI 454
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++Y KCGK+ + F++MQ +D++ W++MI G +G EA+ ++ ++ G+ D+
Sbjct: 455 IDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDD 514
Query: 178 VVMMGLIQACADLG---DSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLAS 232
V ++ ++ AC+ G + ++ S S+ ++ N+ ++ +VD+ A+ G+LD A
Sbjct: 515 VTLIAVLSACSHSGLVTEGKYWFS----SMSQNFNIKPRMAHYICMVDLLARAGNLDEAY 570
Query: 233 HVFKNMSRI-NIVTWGALISG 252
+ M + N+ WGAL++
Sbjct: 571 TFIQRMPFVPNVRIWGALLAA 591
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 319/556 (57%), Gaps = 3/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ + + V +I +Y DI SAR +F+ +P R ++N++I Y + E
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ M + V PD T T + AC +L D ++G E+ ++ G+ +V V +S++ +
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQM 340
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
+ G +EA + F KM+ KDLV W++MI+G NG P +AV+ Y M+ EG+ DE+ +
Sbjct: 341 HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ ACA LG G+ +H ++ R L V V SL+DMY+K +D A VF +
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+++W ++I G N + L +M +P+SV+LVS L ACA+IG L GK I
Sbjct: 461 KNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + +R F+ L +++DMY +CG A F+ + +D+ SWN+++ Y G G
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKG 578
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
A+ LF +MIE+ V PD TF SLL A S SG+V +G +F+ M K+ I P KHYA
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYAS 638
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL RAG +E+A + + M +P A+W ALL+ C ++ +GE A+ + +++
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKS 698
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+G + L+ N +A KW+EVA VRK MR++ + PG S VEV G++HAF+ D H Q
Sbjct: 699 VGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQI 758
Query: 540 EDIVYVLKKLYLEMRA 555
++I VL+ Y +M A
Sbjct: 759 KEINAVLEGFYEKMEA 774
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 254/482 (52%), Gaps = 14/482 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ + +G D+V A +F ++ R + ++N ++ Y++ E L LY++M+
Sbjct: 132 GNALLSMFVRFG---DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD TF L+ C L DL G E+ + G+ +DV V ++++ +YVKCG +
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F++M R+D + W++MI+G N E + + M++ +D D + M +I AC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LGD R G VHGY I+ +V V SL+ M++ G D A VF M ++V+W A+
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NGL +E M+ G PD +++ S L ACA +G L G +H + R
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ S+IDMYSKC A +F ++ ++++ISW II ++ EAL F Q
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLAR 426
MI ++ KP+ T S+LSA + G + G+ ++ + + ++D+ R
Sbjct: 489 MILSL-KPNSVTLVSVLSACARIGALSCGK---EIHAHALRTGLGFDGFLPNALLDMYVR 544
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHA 484
G +E A + S E +A W LL+G K + ++ K+++ +NPD++ +
Sbjct: 545 CGRMEPAWNQFN--SCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 485 LV 486
L+
Sbjct: 603 LL 604
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 201/383 (52%), Gaps = 12/383 (3%)
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
V +G+++L+++V+ G + EA F KM +DL W+ ++ G G EA++ Y RM
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
GI D +++ C L D G VH + IR DV V +L+ MY K G +
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF M R + ++W A+ISG+ +N + L L M+ +PD +++ S + AC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+G +LG+ +HGY ++ F + + S+I M+S G A +F +M+ +DL+SW +
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I+ Y +G E+A+ + M V PD T AS+LSA + GL+++G +M+ ++
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFA 423
Query: 410 IQPTEKHYA----CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH-NHKKFSI 464
+ Y ++D+ ++ +++AL++ + + ++ W +++ G N++ F
Sbjct: 424 DRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVIS-WTSIILGLRLNYRSFEA 482
Query: 465 GEKVAKKVLKLNPDDLGIHALVS 487
+ +L L P+ + + +++S
Sbjct: 483 LFFFQQMILSLKPNSVTLVSVLS 505
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/553 (35%), Positives = 315/553 (56%), Gaps = 4/553 (0%)
Query: 5 NLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY 64
N + GN+ +I++Y + AR++F+ + R ++ ++ AY+ E L Y
Sbjct: 178 NNATVGNA---LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC 124
+ M++E VRP T+ L AC SL L+ G++I + VE + +DV V +++ +Y+KC
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G + +A FE + +D++ W++MI GLV +GQ EA + RM KE + D V + ++
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
ACA G G +H +++ L DV+ +L++MY+K G + A VF M + ++V
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 414
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W AL+ G+A G + +M G E + ++ + L AC+ LK GK IH
Sbjct: 415 SWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEV 474
Query: 305 VRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
V+ F +L + +++ MY KCG A + + M +RD+++WN +I +G G EAL
Sbjct: 475 VKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEAL 534
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
F M ++P+ +TF +++SA LVEEGR F M Y I PTEKHYACMVD+
Sbjct: 535 QKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDI 594
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
LARAG + EA ++ +M +P A+W ALL+ C H IGE+ A++ LKL P + G +
Sbjct: 595 LARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTY 654
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+S +A W +VA +RK M++ G+KK PG S +EV GE+H+F+ D+SH + E+I
Sbjct: 655 VSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIY 714
Query: 544 YVLKKLYLEMRAI 556
L+ L +++++
Sbjct: 715 SELEALTKQIKSL 727
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 219/444 (49%), Gaps = 3/444 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ ++ LY + AR+LF++ + V ++N +I Y+ + E L+ M +E +
Sbjct: 82 INTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGL 141
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD TF L AC S L G E+ + +E G N+ VG++++++Y KCG + +A
Sbjct: 142 EPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARR 201
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D V W+++ +G +E++ Y M +EG+ + M ++ AC L
Sbjct: 202 VFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAA 261
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + + DV+V T+L MY K G + A VF+ + +++ W +I G
Sbjct: 262 LEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGG 321
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+G + M PD V+ ++ L ACA+ G L GK IH V+ +
Sbjct: 322 LVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSD 381
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ G ++I+MYSK G AR +FD+M RD++SW ++ Y G E+ S F +M++
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ 441
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V+ + T+ +L A S+ ++ G+ V K I ++ + + G VE
Sbjct: 442 QGVEANKITYMCVLKACSNPVALKWGKE-IHAEVVKAGIFADLAVANALMSMYFKCGSVE 500
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
+A+++ + MST + W L+ G
Sbjct: 501 DAIRVSEGMSTRD-VVTWNTLIGG 523
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 209/406 (51%), Gaps = 16/406 (3%)
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGS 115
+P +VL +Q + + DS + L++CV DL +G+++ + G +V++ +
Sbjct: 27 APADVLQYLHQ---KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIIN 83
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
++L LYV CG +NEA F+K K +V W+ MI+G G +EA + + M++EG++
Sbjct: 84 TLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEP 143
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
D+ + ++ AC+ +G VH + L + V +L+ MYAK G + A VF
Sbjct: 144 DKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
M+ + V+W L +A++G A +L+ M G P ++ ++ L AC + L+
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263
Query: 296 LGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
GK IH V ++ + T++ MY KCG AR +F+ + +RD+I+WN +I
Sbjct: 264 KGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLV 323
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG-----RYWFDLMVSKYK 409
G EEA +F +M++ V PD T+ ++LSA + G + G R D +VS +
Sbjct: 324 DSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVR 383
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++++ ++AG +++A ++ D M + W AL+ G
Sbjct: 384 FGNA------LINMYSKAGSMKDARQVFDRMPKRD-VVSWTALVGG 422
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 314/544 (57%), Gaps = 3/544 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y DI SAR +F+ +P R ++N++I Y + E L L+ M + V
Sbjct: 233 VNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFV 292
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T T + AC +L D ++G E+ ++ G+ +V V +S++ ++ G +EA +
Sbjct: 293 DPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEM 352
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F KM+ KDLV W++MI+G NG P +AV+ Y M+ EG+ DE+ + ++ ACA LG
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H ++ R L V V SL+DMY+K +D A VF + N+++W ++I G
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
N + L +M +P+SV+LVS L ACA+IG L GK IH + +R F+
Sbjct: 473 LRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +++DMY +CG A F+ + +D+ SWN+++ Y G G A+ LF +MIE
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIE 590
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V PD TF SLL A S SG+V +G +F+ M K+ I P KHYA +VDLL RAG +E
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A + + M +P A+W ALL+ C ++ +GE A+ + +++ +G + L+ N +A
Sbjct: 651 DAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYA 710
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW+EVA VRK MR++ + PG S VEV G++HAF+ D H Q ++I VL+ Y
Sbjct: 711 DSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYE 770
Query: 552 EMRA 555
+M A
Sbjct: 771 KMEA 774
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 253/490 (51%), Gaps = 30/490 (6%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ + +G D+V A +F ++ R + ++N ++ Y++ E L LY++M+
Sbjct: 132 GNALLSMFVRFG---DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD TF L+ C L DL G E+ + G+ +DV V ++++ +YVKCG +
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F++M R+D + W++MI+G N E + + M++ +D D + M +I AC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LGD R G VHGY I+ +V V SL+ M++ G D A VF M ++V+W A+
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NGL +E M+ G PD +++ S L ACA +G L G +H + R
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ S+IDMYSKC A +F ++ ++++ISW II ++ EAL F Q
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYA 418
MI ++ KP+ T S+LSA + G + G+ FD +
Sbjct: 489 MILSL-KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN----------- 536
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LN 476
++D+ R G +E A + S E +A W LL+G K + ++ K+++ +N
Sbjct: 537 ALLDMYVRCGRMEPAWNQFN--SCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594
Query: 477 PDDLGIHALV 486
PD++ +L+
Sbjct: 595 PDEITFTSLL 604
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 201/383 (52%), Gaps = 12/383 (3%)
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
V +G+++L+++V+ G + EA F KM +DL W+ ++ G G EA++ Y RM
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
GI D +++ C L D G VH + IR DV V +L+ MY K G +
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF M R + ++W A+ISG+ +N + L L M+ +PD +++ S + AC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+G +LG+ +HGY ++ F + + S+I M+S G A +F +M+ +DL+SW +
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I+ Y +G E+A+ + M V PD T AS+LSA + GL+++G +M+ ++
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFA 423
Query: 410 IQPTEKHYA----CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH-NHKKFSI 464
+ Y ++D+ ++ +++AL++ + + ++ W +++ G N++ F
Sbjct: 424 DRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVIS-WTSIILGLRLNYRSFEA 482
Query: 465 GEKVAKKVLKLNPDDLGIHALVS 487
+ +L L P+ + + +++S
Sbjct: 483 LFFFQQMILSLKPNSVTLVSVLS 505
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 162/328 (49%), Gaps = 4/328 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT A + +I ++ A +F ++ + + ++ ++I Y + P +
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ Y M E V PD T L AC L L G + A G + V V +S++++
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDM 441
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC +++A+ F ++ K+++ W+S+I GL N + EA+ +++M + + V +
Sbjct: 442 YSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTL 500
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ ACA +G G +H +++R L D + +L+DMY + G ++ A + F + +
Sbjct: 501 VSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK 560
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++ +W L++G+AQ G G +EL +M PD ++ S L AC++ G + G
Sbjct: 561 -DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCG 326
+F NL SV+D+ + G
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAG 647
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 308/527 (58%), Gaps = 1/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR++F+ + + + ++ ++ Y E E L L+++M +P++ TF LKACV
Sbjct: 199 ARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVG 258
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +G+ + A + Y ++FVG +++LY+K G +++A+ FE+M + D++ WS M
Sbjct: 259 LEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFM 318
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I + Q EA++ + RM++ + ++ + L+QACA L D + G +H + ++ L
Sbjct: 319 IARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGL 378
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+++V V +L+DMYAK G ++ + +F V+W +I G+ Q G L L +
Sbjct: 379 DMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKD 438
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M C + V+ S L ACA I L+ G IH +V+ +D N V+G ++IDMY+KCG
Sbjct: 439 MLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGN 498
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR +FD ++ D +SWN +I+ Y +HG EAL F M+ET KPD TF +LSA
Sbjct: 499 IKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSA 558
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
S++GL++ G+ +F MV +Y I+P +HY CMV LL R+G +++A K+V + EP +
Sbjct: 559 CSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVM 618
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW ALLS C H +G A++VL++ P+D H L+SN +A ++W VA +R +M+
Sbjct: 619 VWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMK 678
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ G++K PG S +E G +H F + D SH + I +L+ L ++ R
Sbjct: 679 RKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKAR 725
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 249/489 (50%), Gaps = 10/489 (2%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN 65
L + N++ ++ Y + + A KLF+E+P R ++ ++I YS+ E +GL++
Sbjct: 77 LDLFANNI--LLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFS 134
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
++ E + F+ LK VS K+G + +LG+ +D FVG+++++ Y CG
Sbjct: 135 RLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCG 194
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
A F+ ++ KD+V W+ M+ V N E++ + RM+ G + +++
Sbjct: 195 YAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLK 254
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
AC L G +VHG + + ++ V L+D+Y K+G +D A VF+ M + +++
Sbjct: 255 ACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIP 314
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +I+ +AQ+ + +E+ M+ P+ +L S L ACA + L+LG IH + V
Sbjct: 315 WSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVV 374
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ D N+ + +++DMY+KCG + LF + + +SWN +I Y G+GE+AL
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF M+E V+ T++S+L A + +E G L V + T A ++D+
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNA-LIDMY 493
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDD--- 479
A+ G +++A ++V M E W A++SG H + K + +L + PD
Sbjct: 494 AKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTF 552
Query: 480 LGIHALVSN 488
+GI + SN
Sbjct: 553 VGILSACSN 561
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 158/294 (53%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY D+ A ++FEE+P V ++ +I Y++ E E + ++ +M + V P+
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPN 346
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L+AC SL+DL++G +I V++G +VFV ++++++Y KCG+M ++ F
Sbjct: 347 QFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFS 406
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V W+++I G V G +A+ +K M + + EV +++ACA +
Sbjct: 407 ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP 466
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H S++ + + V +L+DMYAK G++ A VF + + V+W A+ISG++
Sbjct: 467 GSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSV 526
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
+GL G L+ M +PD V+ V L AC+ G L G++ V +D
Sbjct: 527 HGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYD 580
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 184/366 (50%), Gaps = 4/366 (1%)
Query: 74 PDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
P+ +T+ L++C+ D G+ + + ++ G D+F + +LN YVK + +A
Sbjct: 40 PEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAA 99
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++M ++ V + ++I G + EA+ + R++ EG + + V +++
Sbjct: 100 KLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAE 159
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
++ G SVH + + D V T+L+D Y+ G+ + A VF + ++V+W +++
Sbjct: 160 WAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA 219
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+ +N +L+L M+ GF+P++ + S L AC + +GK++HG + +
Sbjct: 220 CYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE 279
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
L +G +ID+Y K G A +F++M D+I W+ +IA Y EEA+ +F +M
Sbjct: 280 ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+V P+ T ASLL A + ++ G V K + ++D+ A+ G +
Sbjct: 340 RGLVLPNQFTLASLLQACASLVDLQLGNQ-IHCHVVKVGLDMNVFVSNALMDMYAKCGRM 398
Query: 431 EEALKI 436
E +L++
Sbjct: 399 ENSLQL 404
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 10/283 (3%)
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+R + + + L+Q+C GD G +H I++ LD+ L++ Y K
Sbjct: 33 QRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKY 92
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE--PDSVSLVS 283
L A+ +F M N V++ LI G++Q + L +Q G E P S V
Sbjct: 93 DSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
LL A+ + KLG S+H + FD + +GT++ID YS CG CAR +FD ++ +D
Sbjct: 153 KLLVSAE--WAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKD 210
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SW ++A Y + EE+L LF +M KP++ TFAS+L A + G+
Sbjct: 211 MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGK---A 267
Query: 403 LMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTE 443
+ +K E+ + ++DL ++G+V++AL++ + M +
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKD 310
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 214/570 (37%), Positives = 323/570 (56%), Gaps = 13/570 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF-EVLGLYNQMIKEDVRP 74
++ Y + A+++F+++ R V +NS+I +S E + EV L QM + DV P
Sbjct: 160 LVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSP 218
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+SST L A + L+ G+EI V G+ DV VG+ +L++Y KC ++ A F
Sbjct: 219 NSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIF 278
Query: 135 EKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRM---KKEGIDADEVVMMGLIQACADL 190
+ M K+ V WS+M+ V REA++ + ++ K + I V + +I+ CA+L
Sbjct: 279 DMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANL 338
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G +H Y+I+ LD+ V +L+ MYAK G ++ A F M + V++ A+I
Sbjct: 339 TDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAII 398
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFD 309
SG+ QNG + L + +EMQ G P+ +L S L ACA + L G H Y + F
Sbjct: 399 SGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFT 458
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ ++ ++IDMY+KCG AR +FD+M R ++SWN +I +YGIHG G EAL LF M
Sbjct: 459 ADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNM 518
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+KPD TF L+SA SHSGLV EG+YWF+ M + I P +HYACMVDLL+RAG
Sbjct: 519 QSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGL 578
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+E ++ M EP + VW ALLS C +K +GE V+KK+ KL P+ G L+SN
Sbjct: 579 FKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNM 638
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED-KSHNQYEDIVYVLKK 548
++ +W++ A VR T ++ G +K PG S +E++G +H F+ +SH Q I L +
Sbjct: 639 YSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDE 698
Query: 549 LYLEMR-----AISSWLQGHMEEHEEHDPL 573
L +EM+ A SS++ +EE E+ L
Sbjct: 699 LLVEMKRLGYQAESSYVFQDVEEEEKERVL 728
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 240/468 (51%), Gaps = 29/468 (6%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEV 60
+TNL+ + +++ LY +++ AR +F+++P R V +N +I AY+ E
Sbjct: 44 ETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEA 103
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ LY +M+ + P+ TF LKAC +L + G EI L ++V+V +++++
Sbjct: 104 IDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDF 163
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +++A F+KM ++D+V W+SMI+G + + V + + + +
Sbjct: 164 YAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTI 223
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+G++ A A + R G +HG+ +RR DV V T ++D+Y K +D A +F M
Sbjct: 224 VGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGI 283
Query: 241 I-NIVTWGALISGFAQNGLAGSTLEL---LMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+ N VTW A++ + LEL L+ ++ +V+L + + CA + L
Sbjct: 284 VKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLST 343
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G +H Y ++ F +L++G +++ MY+KCG+ + A F++M RD +S+ II+ Y
Sbjct: 344 GTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQ 403
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMV 405
+G+ EE L +FL+M + + P+ +T AS+L A +H + G + D M+
Sbjct: 404 NGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMI 463
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
++D+ A+ G+++ A K+ D M G+ W ++
Sbjct: 464 CN-----------ALIDMYAKCGKIDTARKVFDRMHKR-GIVSWNTMI 499
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 313/550 (56%), Gaps = 6/550 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFE-----ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
V +I +Y DI +A +FE EL R + +N +I+ Y E L L+ +M
Sbjct: 180 VSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEM 239
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
++ + PDSST V L C L+DL +G++I + LG +DV VG++++ +Y KCG
Sbjct: 240 LELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDP 299
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
++ F++ Q +LV W S++ NG P EA++ + + D V+++ ++AC
Sbjct: 300 ETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRAC 359
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ L G+++HG++I+ + DV V +LVD Y K G ++ A VF +S ++V+W
Sbjct: 360 SFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWN 419
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
ALISGFAQN A L+ +MQS +P++V++ L C + + L K +H Y +R
Sbjct: 420 ALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRH 479
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F+ N ++ S+I Y+KCG +R +F+++ R+ ++WN I+ +G+HG +E + F
Sbjct: 480 WFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATF 539
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M E +KPDH TF SLLS+ SHSG V+ G +F+ M+ Y ++P + Y CMVDLL R
Sbjct: 540 EKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGR 599
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG + +A ++ SM P +W +LL+ C NH + E VA + +L+ +G L+
Sbjct: 600 AGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLL 659
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+N + EV VR +++ G+KK PG S +EV+ +H F+ D SH++ DI +
Sbjct: 660 ANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATI 719
Query: 547 KKLYLEMRAI 556
+ L LEM+ +
Sbjct: 720 ESLSLEMKRV 729
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 244/482 (50%), Gaps = 34/482 (7%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DVRPDSSTFTVALKA 85
+A +FE + R ++N++I + + + L ++ +M+KE + AL +
Sbjct: 92 NAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSS 151
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV-- 143
C S+ L G EI V+ G +D F+ S+++ +Y+KCG + A FE+++ +LV
Sbjct: 152 CASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGR 211
Query: 144 ---CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
W+ MI G V N A++ + M + GI D ++ ++ C+ L D G +H
Sbjct: 212 NMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIH 271
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G + L+ DV+V T+L++MY K G + + +FK N+V WG+++ AQNG
Sbjct: 272 GLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPN 331
Query: 261 STLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
LE E M CGF PD V L++AL AC+ + G +IHG+ ++ FD ++ +G ++
Sbjct: 332 EALEFFSEFMLDCGF-PDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGAL 390
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+D Y KCG A+ +F + +RDL+SWN +I+ + + +EAL F M +KP+
Sbjct: 391 VDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNT 450
Query: 379 STFASLLSALSHSG---LVEEG-----RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
T A +LS +H L +E R+WF+ + + + ++ A+ G++
Sbjct: 451 VTMACILSVCTHLSVMILCKEVHCYLLRHWFE---TNALVNNS------LISAYAKCGDI 501
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKK----FSIGEKVAKKVLKLNPDDLGIHALV 486
+ + + + + W ++L G H + F+ EK+ + +K PD +L+
Sbjct: 502 HSSRTVFEKLPVRNEV-TWNSILLGFGMHGRTDEMFATFEKMKEANIK--PDHGTFTSLL 558
Query: 487 SN 488
S+
Sbjct: 559 SS 560
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 10/390 (2%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F +KA L D+ G++I ++ G+ D+FV +S+L +Y KCG A+ FE+M+
Sbjct: 42 FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACADLGDSRFG 196
+D V W++MI+G +G +++ ++RM KE G + V + + +CA + G
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR-----INIVTWGALIS 251
L +HG+ +++ ++ D + ++L++MY K G + A +VF+ + N+ W +I
Sbjct: 162 LEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMIL 221
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDF 310
G+ N LEL +EM G PDS ++V L+ C+Q+ L +GK IHG + D
Sbjct: 222 GYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDD 281
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +GT++++MY KCG P + +F + Q+ +L+ W ++ + +G+ EAL F + +
Sbjct: 282 DVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFM 341
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
PD + L A S L G + K +VD + G++
Sbjct: 342 LDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAI-KMGFDSDVFVGGALVDFYGKCGDM 400
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
E A ++ +ST L W AL+SG +K
Sbjct: 401 EYAQQVFYGLSTRD-LVSWNALISGFAQNK 429
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 319/542 (58%), Gaps = 6/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + A +F L + + T+NS++ + + E L + + D++PD
Sbjct: 201 LVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPD 260
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + A L L G+EI A++ G+ +++ VG++++++Y KC M+ AF+
Sbjct: 261 QVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFD 320
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KDL+ W++ G N +A++ ++++ EG+D D ++ ++ AC L
Sbjct: 321 LMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGK 380
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGY+IR L+ D +Q +++D+Y + G +D A +F+++ ++V+W ++IS +
Sbjct: 381 IKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVH 439
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGLA LE+ M+ G EPD V+LVS L A + LK GK IHG+ +R+ F +
Sbjct: 440 NGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSI 499
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY++CG A +F ++R+LI W +I++YG+HG+GE A+ LF++M + +
Sbjct: 500 SNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKI 559
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH TF +LL A SHSGLV EG+ + ++M +Y+++P +HY C+VDLL R +EEA
Sbjct: 560 IPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAY 619
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+IV SM EP VW ALL C H IGE A+K+L+L+ D+ G + LVSN FA
Sbjct: 620 QIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANG 679
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLY 550
+W++V VR M+ SG+ K PG S +EV ++HAF+ DK H + Y+ + V +KL
Sbjct: 680 RWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLK 739
Query: 551 LE 552
E
Sbjct: 740 RE 741
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 271/488 (55%), Gaps = 5/488 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEV 60
IK ++ V ++ALY NDI ARKLF+ + +R V ++NSII AYS E
Sbjct: 85 IKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEA 144
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+++M+K V ++ TF AL+AC +K+G +I ++ G DV+V ++++ +
Sbjct: 145 LCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAM 204
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YV+ GKM EA V F ++ KD+V W+SM+ G + NG EA++ + ++ + D+V +
Sbjct: 205 YVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSI 264
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ +I A LG G +H Y+I+ + ++ V +L+DMYAK + F M+
Sbjct: 265 ISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAH 324
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++++W +G+AQN LELL ++Q G + D+ + S LLAC + L K I
Sbjct: 325 KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEI 384
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
HGYT+R + VL ++ID+Y +CG+ A +F+ ++ +D++SW +I+ Y +G
Sbjct: 385 HGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLAN 444
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+AL +F M ET ++PD+ T S+LSA+ +++G+ ++ K I +
Sbjct: 445 KALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNT-L 503
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPD 478
VD+ AR G VE+A KI + + L +W A++S G H + + ++ + K K+ PD
Sbjct: 504 VDMYARCGSVEDAYKIF-TCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPD 562
Query: 479 DLGIHALV 486
+ AL+
Sbjct: 563 HITFLALL 570
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 238/451 (52%), Gaps = 14/451 (3%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+YG ++ A +F+++ R + T+N+++ Y L +Y +M V DS T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F V LKAC + DL G EI A++ G + VFV +S++ LY KC +N A F++M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 139 -RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
R D+V W+S+I+ NG EA+ + M K G+ + +QAC D + G+
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+H ++ LDV V +LV MY + G + A+ +F N+ +IVTW ++++GF QNG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L LE ++Q+ +PD VS++S ++A ++G+L GK IH Y ++ FD N+++G
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++IDMY+KC S FD M +DLISW A Y + +AL L Q+ +
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 377 DHSTFASLLSA---LSHSGLVEEGR-YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
D + S+L A L+ G ++E Y +S +Q T ++D+ G ++
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNT------IIDVYGECGIIDY 414
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
A++I +S+ + + W +++S C+ H +
Sbjct: 415 AVRIFESIECKD-VVSWTSMIS-CYVHNGLA 443
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 314/547 (57%), Gaps = 5/547 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ Y + A ++F+E+P R V +N+++ R + + L +M+ E V
Sbjct: 106 GSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVA 165
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D+ T + L CV L D + + AV+ G ++FV ++++++Y K G + EA
Sbjct: 166 GDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWV 225
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M +DLV W+S+I+ G+ AV+ + M + G+ D + ++ L A A GD
Sbjct: 226 FGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDE 285
Query: 194 RFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
SVH Y RR ++ D+ ++VDMYAK +D A VF N+ ++V+W LI+G
Sbjct: 286 LGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITG 345
Query: 253 FAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ QNGLA + + +M + G +P + VS L A + +G L+ G +H +++ +
Sbjct: 346 YMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL 405
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + T +ID+Y+KCG A LF+ M R WN IIA G+HGHG +ALSLF QM
Sbjct: 406 DVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ 465
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +KPDH TF SLL+A SH+GLV++GR +FDLM + Y I P KHY CMVD+L RAG++
Sbjct: 466 QEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQL 525
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA + + SM +P AVW ALL C H +G+ ++ + +L+P+++G + L+SN +
Sbjct: 526 DEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMY 585
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI--MEDKSHNQYEDIVYVLKK 548
A KW+ V VR +R+ ++K PG+S +EV G + F + + H Q+E+I L
Sbjct: 586 AKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHD 645
Query: 549 LYLEMRA 555
L +M++
Sbjct: 646 LLAKMKS 652
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 227/427 (53%), Gaps = 21/427 (4%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEA 130
+RPDS TF ++A ++ A+ LG + +VF S+++ Y++ G++ EA
Sbjct: 65 LRPDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M +D+ W++M++GL N + +AV RM EG+ D V + ++ C L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
GD L +H Y+++ L+ ++ V +L+D+Y K G L A VF M+ ++VTW ++I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
S Q G + +EL M G PD ++LVS A AQ G KS+H Y RR +D
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301
Query: 310 F-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ G +++DMY+K A+ +FD + RD++SWN +I Y +G EA+ ++
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361
Query: 369 M-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M +KP TF S+L A S+ G +++G L + K + C++DL A+
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSI-KTGLNLDVYVTTCLIDLYAKC 420
Query: 428 GEVEEALKIVDSM---STEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVLKLNPDDL 480
G++ EA+ + + M ST P W A+++G H K S+ ++ ++ +K PD +
Sbjct: 421 GKLVEAMFLFEHMPRRSTGP----WNAIIAGLGVHGHGAKALSLFSQMQQEEIK--PDHV 474
Query: 481 GIHALVS 487
+L++
Sbjct: 475 TFVSLLA 481
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 208/437 (47%), Gaps = 50/437 (11%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K LS +I +YG + A +F + LR + T+NSII A + +
Sbjct: 195 VKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAV 254
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE-----IWRKAVELGYGNDVFVGSS 116
L++ M++ V PD T V+L + V+ ++G + + R+ ++G D+ G++
Sbjct: 255 ELFHGMMESGVCPDVLTL-VSLASAVAQCGDELGAKSVHCYVRRRGWDVG---DIIAGNA 310
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDA 175
M+++Y K K++ A F+ + +D+V W+++I G + NG EA+ Y M EG+
Sbjct: 311 MVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKP 370
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ + ++ A + LG + G+ +H SI+ LNLDV V T L+D+YAK G L A +F
Sbjct: 371 IQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLF 430
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
++M R + W A+I+G +G L L +MQ +PD V+ VS L AC+ G +
Sbjct: 431 EHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVD 490
Query: 296 LGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+S FD V G I + C V RA
Sbjct: 491 QGRSF-------FDLMQTVYGIVPIAKHYTCMVDMLGRA--------------------- 522
Query: 355 IHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G +EA + I++M +KPD + + +LL A G VE G+ + +++ P
Sbjct: 523 --GQLDEA----FEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL---FELDPE 573
Query: 414 E-KHYACMVDLLARAGE 429
+Y M ++ A+ G+
Sbjct: 574 NVGYYVLMSNMYAKIGK 590
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 314/541 (58%), Gaps = 6/541 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
++ +F ++ + +N++I K+ + + LY M P++ T LKAC
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+D+++G +I V+ GY +DVFV +S+L+LYVKC ++A+ F+ + K++V W+++
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAI 186
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G + +G REA+ A+K++ + G+ D ++ ++ ACA LGD G + Y +
Sbjct: 187 ITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGM 246
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V TSL+DMY K G+L+ A+ +F M +IV+W +I G+A NGL L+L +
Sbjct: 247 GRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQ 306
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
MQS +PD ++V L ACA +G L LG R F N VLGT++IDMYSKCG
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGS 366
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ A +F M+ +D + WN ++ ++GH + SLF + + ++PD +TF LL
Sbjct: 367 VTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+H G V EGR +F+ M + + P+ +HY CMVDLL RAG + EA +++++M +P
Sbjct: 427 CTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAV 486
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW ALL GC HK + E+V KK+++L P + G + +SN ++ +WEE +R TM+
Sbjct: 487 VWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMK 546
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEH 567
+ ++K+ S +E++G +H F++ DKSH E I L +L E++A+ GH+
Sbjct: 547 EQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAV-----GHVPTT 601
Query: 568 E 568
E
Sbjct: 602 E 602
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 182/359 (50%), Gaps = 3/359 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY ++ A K+F+++P + V ++ +II Y E +G + ++++ ++PD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + L AC L D GE I R + G G +VFV +S+L++YVKCG + A + F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+V WS+MI G FNG P++A+D + +M+ E + D M+G++ ACA LG
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ R + + T+L+DMY+K G + A +F M + + V W A++ G +
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSM 394
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG A + L ++ G PD + + L C GF+ G+ R F +
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIE 454
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ + G+ + A L + M + + + W ++ +H A + ++IE
Sbjct: 455 HYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 190/372 (51%), Gaps = 13/372 (3%)
Query: 117 MLNLYVKC----GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+LNL + C G N + + F +++ ++ W++MI GLV +A+ Y M+ G
Sbjct: 50 LLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGG 109
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ + +++ACA D R GL +H ++ + DV V+TSL+ +Y K + D A
Sbjct: 110 FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDAL 169
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF ++ N+V+W A+I+G+ +G + ++ G +PDS SLV L ACA++G
Sbjct: 170 KVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLG 229
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G+ I Y N+ + TS++DMY KCG A +F M +D++SW+ +I
Sbjct: 230 DCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQ 289
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y +G ++AL LF QM +KPD T +LSA + G ++ G W ++ + +
Sbjct: 290 GYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLG-IWASSLMDRNEFL 348
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC----HNHKKFSIGEK 467
++D+ ++ G V +A +I +M + + VW A++ G H FS+
Sbjct: 349 SNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRV-VWNAMMVGLSMNGHAKAVFSLFSL 407
Query: 468 VAKKVLKLNPDD 479
V K ++ PD+
Sbjct: 408 VEKHGIR--PDE 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H +R HL+ D + ++ G + + VF + NI W +I G
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ L M+ GF P++ ++ L ACA+ ++LG IH V+ +D ++ + TS
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++ +Y KC A +FD + ++++SW II Y GH EA+ F +++E +KPD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+ +L+A + G G W D +S + ++D+ + G +E A I
Sbjct: 215 SFSLVKVLAACARLGDCTSGE-WIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273
Query: 438 DSMSTEPGLAVWVALLSG 455
+M E + W ++ G
Sbjct: 274 SAMP-EKDIVSWSTMIQG 290
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 314/541 (58%), Gaps = 6/541 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
++ +F ++ + +N++I K+ + + LY M P++ T LKAC
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+D+++G +I V+ GY +DVFV +S+L+LYVKC ++A+ F+ + K++V W+++
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAI 186
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G + +G REA+ A+K++ + G+ D ++ ++ ACA LGD G + Y +
Sbjct: 187 ITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGM 246
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V TSL+DMY K G+L+ A+ +F M +IV+W +I G+A NGL L+L +
Sbjct: 247 GRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQ 306
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
MQS +PD ++V L ACA +G L LG R F N VLGT++IDMYSKCG
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGS 366
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ A +F M+ +D + WN ++ ++GH + SLF + + ++PD +TF LL
Sbjct: 367 VTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+H G V EGR +F+ M + + P+ +HY CMVDLL RAG + EA +++++M +P
Sbjct: 427 CTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAV 486
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW ALL GC HK + E+V KK+++L P + G + +SN ++ +WEE +R TM+
Sbjct: 487 VWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMK 546
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEH 567
+ ++K+ S +E++G +H F++ DKSH E I L +L E++A+ GH+
Sbjct: 547 EQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAV-----GHVPTT 601
Query: 568 E 568
E
Sbjct: 602 E 602
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 182/359 (50%), Gaps = 3/359 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY ++ A K+F+++P + V ++ +II Y E +G + ++++ ++PD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + L AC L D GE I R + G G +VFV +S+L++YVKCG + A + F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+V WS+MI G FNG P++A+D + +M+ E + D M+G++ ACA LG
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ R + + T+L+DMY+K G + A +F M R + V W A++ G +
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSM 394
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG A + L ++ G PD + + L C GF+ G+ R F +
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIE 454
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ + G+ + A L + M + + + W ++ +H A + ++IE
Sbjct: 455 HYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 190/372 (51%), Gaps = 13/372 (3%)
Query: 117 MLNLYVKC----GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+LNL + C G N + + F +++ ++ W++MI GLV +A+ Y M+ G
Sbjct: 50 LLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGG 109
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ + +++ACA D R GL +H ++ + DV V+TSL+ +Y K + D A
Sbjct: 110 FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDAL 169
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF ++ N+V+W A+I+G+ +G + ++ G +PDS SLV L ACA++G
Sbjct: 170 KVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLG 229
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G+ I Y N+ + TS++DMY KCG A +F M +D++SW+ +I
Sbjct: 230 DCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQ 289
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y +G ++AL LF QM +KPD T +LSA + G ++ G W ++ + +
Sbjct: 290 GYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLG-IWASSLMDRNEFL 348
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC----HNHKKFSIGEK 467
++D+ ++ G V +A +I +M + + VW A++ G H FS+
Sbjct: 349 SNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRV-VWNAMMVGLSMNGHAKAVFSLFSL 407
Query: 468 VAKKVLKLNPDD 479
V K ++ PD+
Sbjct: 408 VEKHGIR--PDE 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H +R HL+ D + ++ G + + VF + NI W +I G
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ L M+ GF P++ ++ L ACA+ ++LG IH V+ +D ++ + TS
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++ +Y KC A +FD + ++++SW II Y GH EA+ F +++E +KPD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+ +L+A + G G W D +S + ++D+ + G +E A I
Sbjct: 215 SFSLVKVLAACARLGDCTSGE-WIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273
Query: 438 DSMSTEPGLAVWVALLSG 455
+M E + W ++ G
Sbjct: 274 SAMP-EKDIVSWSTMIQG 290
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 306/527 (58%), Gaps = 10/527 (1%)
Query: 40 GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW 99
G YN++I AY+ +P +Y +++ PD TF V LKAC + ++ GE++
Sbjct: 69 GTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVH 128
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
AV++G+ D++V +S+L+ Y CGK A F++M +D+V W+ +I+G V G
Sbjct: 129 GVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFD 188
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
EA++ + +M + + + ++ AC +G G VHG +R + + V +LV
Sbjct: 189 EAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALV 245
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMY K L A +F + +IV+W ++ISG Q +LEL +MQ G EPD +
Sbjct: 246 DMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRI 305
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
L S L ACA +G L G+ + Y R+ ++++ +GT+++DMY+KCG A +F+ +
Sbjct: 306 ILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGI 365
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+R++ +WN ++ +HGHG EAL F MI ++P+ TF ++L+A HSGLV EGR
Sbjct: 366 PNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGR 425
Query: 399 YWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+F M+S+ + P +HY CM+DLL RAG ++EA K + +M P + +W ALLS C
Sbjct: 426 SYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACK 485
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
+ + +++ +L+L D G++ L+SN +A ++W++V VR+ M+ G++K PG
Sbjct: 486 ANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGS 545
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHM 564
SV+EV+GE H F++ D +H++ EDI + L + A +L+GH
Sbjct: 546 SVIEVDGEAHEFLVGDTNHSRNEDI-----HILLNILANQVYLEGHF 587
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 195/364 (53%), Gaps = 9/364 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F+E+ +R V ++ +I Y R E + L+ +K DV P+ +TF L AC
Sbjct: 159 AGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGR 215
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L MG+ + + +G + VG++++++YVKC + EA F+++ +D+V W+S+
Sbjct: 216 MGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSI 275
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+GLV QP+++++ + M+ G++ D +++ ++ ACA LG +G V Y R+ +
Sbjct: 276 ISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGI 335
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D+ + T+LVDMYAK G +++A H+F + NI TW AL+ G A +G L+
Sbjct: 336 EWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFEL 395
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKS-IHGYTVRRFDFNLVLG--TSVIDMYSKC 325
M G P+ V+ ++ L AC G + G+S + + F+F+ L +ID+ +
Sbjct: 396 MIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRA 455
Query: 326 GVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
G+ A M D++ W ++++ +G+ E + + ++E +K S L
Sbjct: 456 GLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLE--LKSQDSGVYVL 513
Query: 385 LSAL 388
LS +
Sbjct: 514 LSNI 517
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 14/256 (5%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ ARKLF+ELP R + ++ SII + + P + L L+ M V PD T L A
Sbjct: 254 LCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSA 313
Query: 86 CVSLMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
C SL L G E I R+ +E D+ +G++++++Y KCG + A+ F + ++
Sbjct: 314 CASLGALDYGRWVQEYIERQGIEW----DIHIGTALVDMYAKCGCIEMALHIFNGIPNRN 369
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+ W++++ GL +G EA+ ++ M GI +EV + ++ AC G G S
Sbjct: 370 IFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFY 429
Query: 202 YSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQNG- 257
I + N +++ ++D+ + G LD A +NM +++ WGAL+S NG
Sbjct: 430 QMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGN 489
Query: 258 --LAGSTLELLMEMQS 271
L+ L L+E++S
Sbjct: 490 VELSQEILSHLLELKS 505
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 328/575 (57%), Gaps = 10/575 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ Y + A + F+E+ R V +N+++ R E +GL+ +M+ E V
Sbjct: 108 GALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVA 167
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D+ T + L CV L D + + AV+ G +++FV ++M+++Y K G + E
Sbjct: 168 GDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKV 227
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +DLV W+S+I+G GQ AV+ + M+ G+ D + ++ L A A GD
Sbjct: 228 FDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDI 287
Query: 194 RFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G SVH Y +RR ++ D+ ++VDMYAK ++ A +F +M + V+W LI+G
Sbjct: 288 CGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITG 347
Query: 253 FAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ QNGLA + + MQ G +P + VS L A + +G L+ G +H +++ +
Sbjct: 348 YMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL 407
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +GT VID+Y+KCG A LF+Q R WN +I+ G+HGHG +ALSLF QM
Sbjct: 408 DVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQ 467
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + PDH TF SLL+A SH+GLV++GR +F++M + Y I+P KHYACMVD+ RAG++
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQL 527
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
++A + +M +P A+W ALL C H +G+ ++ + +L+P ++G + L+SN +
Sbjct: 528 DDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMY 587
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS--HNQYEDIVYVLKK 548
A KW+ V VR +R+ ++K PG+S +EV ++ F ++ H Q+E+I L
Sbjct: 588 AKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLD 647
Query: 549 LYLEMRAIS-----SWLQGHMEEHEEHDPLSTAAQ 578
L ++R++ S++ +EE E+ L+ ++
Sbjct: 648 LLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSE 682
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 223/407 (54%), Gaps = 29/407 (7%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D F ++++ Y++ G++ +A AF++M+ +D+ W++M++GL N + EAV + RM
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
EG+ D V + ++ C LGD L++H Y+++ L+ ++ V +++D+Y K G L+
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
VF MS ++VTW ++ISG Q G S +E+ M+ G PD ++L+S A A
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282
Query: 290 QIGFLKLGKSIHGYTVRR-FDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
Q G + G+S+H Y VRR +D +++ G +++DMY+K A+ +FD M RD +SWN
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWN 342
Query: 348 VIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+I Y +G EA+ ++ M + +KP TF S+L A SH G +++G L +
Sbjct: 343 TLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI- 401
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGC----HNH 459
K + C++DL A+ G+++EA+ + + ST P W A++SG H
Sbjct: 402 KTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP----WNAVISGVGVHGHGA 457
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVS------------NFFAMEQ 494
K S+ ++ ++ ++PD + +L++ NFF M Q
Sbjct: 458 KALSLFSQMQQE--GISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQ 502
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 308/550 (56%), Gaps = 35/550 (6%)
Query: 9 YGNSVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
Y +S+G +++ Y D+ +ARK+F+E+P R V N +I +Y E + ++ M
Sbjct: 73 YNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTM 132
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
V+PD TF LKAC ++ +G++I A ++G + +FVG+ ++++Y KCG +
Sbjct: 133 CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 192
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+EA + ++M R+D+V W+S++ G N + +A++ + M+ I D M L+ A
Sbjct: 193 SEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 252
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
++ T+ MY K +F M + ++V+W
Sbjct: 253 SN-------------------------TTTENVMYVK--------DMFFKMGKKSLVSWN 279
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
+I + +N + +EL M++ GFEPD+VS+ S L AC L LGK IHGY R
Sbjct: 280 VMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 339
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ NL+L ++IDMY+KCG AR +F+ M+SRD++SW +I++YG G G +A++LF
Sbjct: 340 KLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 399
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M ++ + PD F + L+A SH+GL+EEGR F LM YKI P +H ACMVDLL R
Sbjct: 400 SKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 459
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG+V+EA K + M EP VW ALL C H IG A K+ +L P+ G + L+
Sbjct: 460 AGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLL 519
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SN +A +WEEV +R M+ G+KK PG S VEVN +H F++ D+SH Q +I L
Sbjct: 520 SNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYREL 579
Query: 547 KKLYLEMRAI 556
L +M+ +
Sbjct: 580 DVLVKKMKEL 589
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 9/295 (3%)
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+VH I L + + L+ YA + A VF + N++ +I + NG
Sbjct: 61 TVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNG 120
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGT 316
+++ M SC +PD + L AC+ G + +GK IHG + L +G
Sbjct: 121 FYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGN 180
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++ MY KCG S AR + D+M RD++SWN ++A Y + ++AL + +M +
Sbjct: 181 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISH 240
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D T ASLL A+S++ E Y D+ K + + M+ + + EA+++
Sbjct: 241 DAGTMASLLPAVSNT-TTENVMYVKDMFFKMGK--KSLVSWNVMIGVYMKNAMPVEAVEL 297
Query: 437 VDSMST---EPGLAVWVALLSGCHNHKKFSIGEKVAKKV--LKLNPDDLGIHALV 486
M EP ++L C + S+G+K+ + KL P+ L +AL+
Sbjct: 298 YSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 169/403 (41%), Gaps = 52/403 (12%)
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF 112
+K SP E + Q++ D PD T +S DL+ +
Sbjct: 35 QKNSPKETAFMLGQVL--DTYPDLKTLRTVHSRIIS-EDLRYNSSL-------------- 77
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
G ++ Y + A F+++ ++++ + MI V NG RE + + M
Sbjct: 78 -GVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCH 136
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ D +++AC+ G+ G +HG + + L+ + V LV MY K G L A
Sbjct: 137 VKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 196
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
V MSR ++V+W +L++G+AQN LE+ EM+S D+ ++ S L A +
Sbjct: 197 LVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT- 255
Query: 293 FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
T+ MY K +F +M + L+SWNV+I
Sbjct: 256 -----------------------TTENVMYVK--------DMFFKMGKKSLVSWNVMIGV 284
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y + EA+ L+ M +PD + S+L A + + G+ + + K+ P
Sbjct: 285 YMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-IERKKLIP 343
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G ++ A + ++M + + W A++S
Sbjct: 344 NLLLENALIDMYAKCGCLDRARDVFENMKSR-DVVSWTAMISA 385
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 287/509 (56%), Gaps = 4/509 (0%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMG 95
P R +YN +I ++ R P + L L+ +M+ + V PD T +K+C + DL +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+ A + G+ D FV +S++++Y CG + A V F +Q K ++ W++MI G V N
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G +E V+ +K M + DEV ++ + AC LGD+ G + Y+ + + +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
T+LVDMYAK G LD A +F M ++V W A+ISG+ Q+ L + EMQ
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL--VLGTSVIDMYSKCGVPSCARA 333
P+ V++VS L ACA +G L+ GK +H Y +RR D L +LGT+++D Y+KCG A
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSY-IRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
F+ M R+ +W +I +G EAL LF M+E ++P TF +L A SH L
Sbjct: 430 AFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCL 489
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
VEEGR F M Y I P +HY CMVDLL RAG ++EA + + +M EP VW ALL
Sbjct: 490 VEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALL 549
Query: 454 SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
S C HK IGE+ K+++ L+P G + L+SN +A +W+ A VRK M++ G++K
Sbjct: 550 SACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEK 609
Query: 514 VPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+PG S++E+ G + F ED H Q +I
Sbjct: 610 IPGCSLIELEGTIFEFFAEDSEHPQLTEI 638
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 189/379 (49%), Gaps = 15/379 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+V+A LF + ++GV +N++I Y + EV+ ++ M++ D
Sbjct: 212 LIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFD 271
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T AC L D +G+ I A E G + ++++++Y KCG++++A F+
Sbjct: 272 EVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFD 331
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D+V WS+MI+G + + REA+ + M+ ++ ++V M+ ++ ACA LG
Sbjct: 332 RMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALET 391
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y R+ L L V + T+LVD YAK G + A F++M N TW ALI G A
Sbjct: 392 GKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMAS 451
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG + LEL M EP V+ + LLAC+ ++ G+ +T D+ +
Sbjct: 452 NGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGR--RHFTSMTQDYGICPR 509
Query: 316 TS----VIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGH---GEEALSLFL 367
++D+ + G+ A M + + W ++++ +H + GEEAL +
Sbjct: 510 IEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIV 569
Query: 368 QMIETMVKPDHSTFASLLS 386
+ P HS LLS
Sbjct: 570 PL-----DPCHSGNYILLS 583
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 18/252 (7%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N ++ +Y ++ AR+LF+ + R V ++++I Y++ + E L ++N+M
Sbjct: 308 NLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT 367
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGE----EIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+V P+ T L AC L L+ G+ I RK + L V +G+++++ Y KCG
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPL----TVILGTALVDFYAKCGC 423
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +A+ AFE M ++ W+++I G+ NG+ REA++ + M + I+ +V +G++ A
Sbjct: 424 IKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLA 483
Query: 187 CA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-R 240
C+ + G F Y I ++ +VD+ + G +D A +NM
Sbjct: 484 CSHGCLVEEGRRHFTSMTQDYGICPR----IEHYGCMVDLLGRAGLIDEAYQFIRNMPIE 539
Query: 241 INIVTWGALISG 252
N V W AL+S
Sbjct: 540 PNAVVWRALLSA 551
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/610 (34%), Positives = 336/610 (55%), Gaps = 54/610 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMIKE-- 70
I+A+YG + A ++F+E+ R ++ ++NSI+ AY + L + +M
Sbjct: 168 IVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYS 227
Query: 71 -DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD+ T L AC S+ L+ G+++ +V G +DVFVG++++++Y KC KMNE
Sbjct: 228 LKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNE 287
Query: 130 AMVAFEKMQRKDLVCWSSMINGL-----------VFN----------------------- 155
A FE +++KD+V W++M+ G +F
Sbjct: 288 ANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQ 347
Query: 156 -GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL---- 210
G EA+D +++M+ G++ + V + L+ CA +G +G H Y I+ LNL
Sbjct: 348 KGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWND 407
Query: 211 ---DVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNGLAGSTLEL 265
D+ V L+DMYAK +A +F ++ N+VTW +I G+AQ+G A L+L
Sbjct: 408 KEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKL 467
Query: 266 LMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL--GTSVIDM 321
++ Q +P++ +L AL+ACA++G L+LG+ +H Y +R + + VL G +IDM
Sbjct: 468 FAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDM 527
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSK G ARA+FD M+ R+++SW ++ YG+HG GEEAL LF QM + D TF
Sbjct: 528 YSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITF 587
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+L A SHSG+V++G +F MV + I P +HYACMVDLL RAG + EA++++ +MS
Sbjct: 588 LVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMS 647
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
EP VWVALLS H +GE A K+ +L ++ G + L+SN +A ++W++VA
Sbjct: 648 MEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVAR 707
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQ 561
+R M+ +G++K PG S ++ F + D+SH + E I +L L ++ + Q
Sbjct: 708 IRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQ 767
Query: 562 GHMEEHEEHD 571
H+ D
Sbjct: 768 TSFALHDVDD 777
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 231/461 (50%), Gaps = 64/461 (13%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ LG Y QM + PD TF LKAC + L+ G + G G++VF+ +S++
Sbjct: 110 DTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIV 169
Query: 119 NLYVKCGKMNEAMVAF-EKMQRK--DLVCWSSMINGLVFNGQPREAVDAYKRMKKE---G 172
+Y +CG +++A F E ++RK D+V W+S++ V GQ R A+ RM
Sbjct: 170 AMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLK 229
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ D + ++ ++ ACA + + G VHG+S+R L DV V +LV MYAK ++ A+
Sbjct: 230 LRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEAN 289
Query: 233 HVFKNMS-----------------------------------RINIVTWGALISGFAQNG 257
VF+ + +++++TW A+I+G+AQ G
Sbjct: 290 KVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKG 349
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--------D 309
L++ +MQ G EP+ V+L S L CA +G L GK H Y ++ +
Sbjct: 350 HGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKE 409
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD--LISWNVIIASYGIHGHGEEALSLFL 367
+L++ +IDMY+KC AR++FD ++ +D +++W V+I Y HG +AL LF
Sbjct: 410 DDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFA 469
Query: 368 QMI--ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ---PTEKHYA--CM 420
Q+ +T +KP+ T + L A + G + GR + Y ++ +E Y C+
Sbjct: 470 QIFKQKTSLKPNAFTLSCALMACARLGELRLGR-----QLHAYALRNENESEVLYVGNCL 524
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+D+ +++G+++ A + D+M + W +L++G H +
Sbjct: 525 IDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLMTGYGMHGR 564
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 58/422 (13%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P + L+ C +L++ K+ + + G+ ++F S + Y++CG EA+
Sbjct: 28 PPTIPLISLLRQCKTLINAKLAHQ---QIFVHGF-TEMF--SYAVGAYIECGASAEAVSL 81
Query: 134 FEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+++ + W+++I V G + + Y +M++ G D +++AC ++
Sbjct: 82 LQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIP 141
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRI-NIVTWGA 248
R G SVH L +V + S+V MY + G LD A +F + +I +IV+W +
Sbjct: 142 SLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNS 201
Query: 249 LISGFAQNGLAGSTLELLMEM---QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
+++ + Q G + + L + M S PD+++LV+ L ACA + L+ GK +HG++V
Sbjct: 202 ILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSV 261
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R ++ +G +++ MY+KC + A +F+ ++ +D++SWN ++ Y G + ALS
Sbjct: 262 RNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALS 321
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF M E +K D T++++++
Sbjct: 322 LFKMMQEEDIKLDVITWSAVIAG------------------------------------Y 345
Query: 425 ARAGEVEEALKIVDSMS---TEPGLAVWVALLSGCHNHKKFSIGEK----VAKKVLKLNP 477
A+ G EAL + M EP + +LLSGC + G++ V K +L LN
Sbjct: 346 AQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNW 405
Query: 478 DD 479
+D
Sbjct: 406 ND 407
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 316/563 (56%), Gaps = 36/563 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK--EDVRPDSSTFTVALKAC 86
AR LF+++P + T+N++I AY+ PF+ ++ ++ ED+ P+ TF +KA
Sbjct: 78 ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PNKFTFPFVIKAA 136
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L ++G + A++L +G D+++ +S++ Y CG ++ A F+ + KD+V W+
Sbjct: 137 SELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWN 196
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
SMI+ P +A++ + +M++E + + V M+G++ ACA D FG V Y R+
Sbjct: 197 SMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK 256
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN------------------------ 242
+ +D+ + +++DMY K G +D A +F M +
Sbjct: 257 GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVF 316
Query: 243 -------IVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFL 294
I W LIS + QNG L + E+Q +PD V+LVS L ACAQ+G +
Sbjct: 317 NAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAI 376
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LG IH Y R N L +S++DMY+KCG A +F ++ RD+ W+ +IA
Sbjct: 377 DLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGL 436
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G+HG G+ A+ LF +M E VKP+ TF ++L A SH+GLV+EGR +F M Y + P
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPE 496
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
KHYACMVD+L RAG +EEA+++++ MST P +VW ALL C H +GE + ++L
Sbjct: 497 MKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLL 556
Query: 474 KLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
KL P + G L+SN +A +WE+V+ +RK MR + +KK PG S +E NG +H F++ D
Sbjct: 557 KLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGD 616
Query: 534 KSHNQYEDIVYVLKKLYLEMRAI 556
+H +I L+++ +++++
Sbjct: 617 NTHPLSSNIYSKLEEIATKLKSV 639
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 242/538 (44%), Gaps = 106/538 (19%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ ++ YG D+ A +LF+ + + V ++NS+I A+++ P + L L+ +M +E+V
Sbjct: 164 LNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENV 223
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+S T L AC +DL+ G + G D+ + ++ML++Y KCG +++A
Sbjct: 224 MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQK 283
Query: 133 AFEKMQRKDLVCWSSMING-----------LVF--------------------NGQPREA 161
F++M +D+ W+ M++G LVF NG+P+EA
Sbjct: 284 LFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEA 343
Query: 162 VDAYKRMKKEGI-DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
+ + ++ I DEV ++ + ACA LG G +H Y R + L+ + +SLVD
Sbjct: 344 LAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVD 403
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MYAK G L+ A VF ++ ++ W A+I+G +G + ++L EMQ +P+SV+
Sbjct: 404 MYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVT 463
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ L AC+ G + G R F +M+
Sbjct: 464 FTNVLCACSHAGLVDEG----------------------------------RVFFHEMEP 489
Query: 341 -----RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
++ + ++ G G EEA+ L +M T P S + +LL A S VE
Sbjct: 490 VYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTT---PSASVWGALLGACSLHMNVE 546
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMV--DLLARAG---EVEEALKIV--DSMSTEPGLAV 448
G D ++ K++P H A ++ ++ A+ G +V E K++ + EPG +
Sbjct: 547 LGELASDQLL---KLEP-RNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSS 602
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+ N +F +G+ H L SN ++ K EE+A K++
Sbjct: 603 ----IEANGNVHEFLVGDNT--------------HPLSSNIYS---KLEEIATKLKSV 639
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 304/509 (59%), Gaps = 3/509 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+ + +++ + L LY QM++ RP++ TF ALK+C +L +G + +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK--MQRKDLVCWSSMINGLVFNGQPREA 161
++G + FV + ++++Y K ++ A FE+ RK VC++++++G V N + EA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
V +++M +EG+ + V ++GLI AC + G S+H +++ + DV V + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y K G ++ A +F M +++W A++SG+AQNGLA + LEL M G PD V+L
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 282 VSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
V L +CA +G +G + F N L ++I+MY++CG + A+A+FD M
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
R L+SW II YG+HGHGE A+ LF +MI + ++PD + F +LSA SH+GL ++G +
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F +M Y+++P +HY+CMVDLL RAG ++EA +++SM +P AVW ALL C HK
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+ E ++V++L P+++G + L+SN ++ + V +R M++ +KK PG S V
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
E+ G +H FI+ D++H Q ++I VL++L
Sbjct: 497 ELKGRVHPFIVGDRNHLQSDEIYRVLEEL 525
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 208/409 (50%), Gaps = 23/409 (5%)
Query: 16 IIALYGGKNDIVSARKLFEE--LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++Y + + +ARK+FEE + YN+++ Y E + L+ QM +E V
Sbjct: 90 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVP 149
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+S T + ACVS ++L++G + ++ G+ +DV V + + +Y+KCG +N A
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG-- 191
F++M K L+ W++M++G NG ++ Y+ M G+ D V ++G++ +CA+LG
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269
Query: 192 ----DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ F + G++ LN +L++MYA+ G+L A VF M +V+W
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLN------NALINMYARCGNLTKAQAVFDGMPERTLVSWT 323
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+I G+ +G ++L EM G EPD + V L AC+ G G + + + +
Sbjct: 324 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG--LEYFKMMK 381
Query: 308 FDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
++ L G + ++D+ + G A+ L + M + D W ++ + IH + E A
Sbjct: 382 RNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELA 441
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
F ++IE ++P++ + LLS + + +G +M+ + K++
Sbjct: 442 ELAFERVIE--LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK 488
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V I +Y + A+KLF+E+P++G+ ++N+++ Y++ VL LY M V
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T L +C +L +G E+ K G+ ++ F+ ++++N+Y +CG + +A
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M + LV W+++I G +G AV +K M + GI+ D + ++ AC+ G
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
+ GL + ++R+ L+ + + +VD+ + G L A + ++M + + WGAL
Sbjct: 370 TDQGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGAL 428
Query: 250 I 250
+
Sbjct: 429 L 429
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 308/540 (57%), Gaps = 2/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LY ARK+F+ +P R +N++I +SR + + ++ M+ + D
Sbjct: 154 IVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFD 213
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T L A L + ++G I A + G +DV+V + +++LY KCGK + + F+
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFD 273
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + DL+ +++MI+G FN + AV ++ + G + ++GLI +
Sbjct: 274 QIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQL 333
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ S++ + L V T+L +Y + + A +F ++ +W A+ISG+ Q
Sbjct: 334 SRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQ 393
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
NGL + L EM P+ V++ S L ACAQ+G L +GK +HG R + N+ +
Sbjct: 394 NGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY+KCG AR LFD M +++++WN +I YG+HGHG+EAL LF +M+++ +
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P TF S+L A SHSGLV EG F M + Y QP +HYACMVD+L RAG++ AL
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++ M EPG AVW ALL C HK + +K++ +L+P+++G + L+SN ++ ++
Sbjct: 573 EFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDR 632
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ + A VR+ ++K + K PG +++E++ + + F D+SH Q I +L+KL +MR
Sbjct: 633 NFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMR 692
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 224/443 (50%), Gaps = 13/443 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALK 84
+ R+LF ++ + +N +I +S P + LY + K+ ++RPD+ T+ A+
Sbjct: 62 VAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAIS 121
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
A L D ++G + ++ G +++FVGS++++LY K + A F+ M +D V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W++MI+G N +++ + M G+ D + ++ A A+L + R G+ + +
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLAS 241
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
++ L+ DV V T L+ +Y+K G +F + + +++++ A+ISG+ N S +
Sbjct: 242 KKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVT 301
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL----GTSVID 320
L E+ + G +S +LV + L+L + I +++ ++L T++
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLK---IGIILQPSVSTALTT 358
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
+Y + AR LFD+ + L SWN +I+ Y +G + A+SLF +M+ + P+ T
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQL-SPNPVT 417
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+LSA + G + G+ W ++ +++ +VD+ A+ G + EA ++ D M
Sbjct: 418 VTSILSACAQLGALSIGK-WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM 476
Query: 441 STEPGLAVWVALLS--GCHNHKK 461
+ + W A+++ G H H K
Sbjct: 477 -VDKNVVTWNAMITGYGLHGHGK 498
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 135/269 (50%), Gaps = 9/269 (3%)
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
L + I ++ D+ T L + G + +F +S+ ++ + LI GF+ N
Sbjct: 31 LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90
Query: 257 GLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
GL S++ L + + PD+ + A+ A +++ ++G +H ++ V NL +
Sbjct: 91 GLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFV 150
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++D+Y K AR +FD M RD + WN +I+ + + + E+++ +F+ M++ +
Sbjct: 151 GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL 210
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAGEVEE 432
D +T A++L+A++ ++E R + + SK + ++ L ++ G+ +
Sbjct: 211 SFDSTTLATVLTAVAE---LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCK 267
Query: 433 ALKIVDSMSTEPGLAVWVALLSG-CHNHK 460
+ D + +P L + A++SG NH+
Sbjct: 268 GRILFDQID-QPDLISYNAMISGYTFNHE 295
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 304/543 (55%), Gaps = 34/543 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y D+ SARK+F+E+P R V N +I +Y E + ++ M +VRP
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF LKAC + +G +I A ++G + +FVG+ ++++Y KCG ++EA +
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M R+D+V W+S++ G N + +A++ + M+ I D M L+ A ++
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN----- 253
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
T+ MY K +F M + ++V+W +I +
Sbjct: 254 --------------------TTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+N + +EL M++ GFEPD+VS+ S L AC L LGK IHGY R + NL+
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L ++IDMY+KCG AR +F+ M+SRD++SW +I++YG G G +A++LF ++ ++
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ PD F + L+A SH+GL+EEGR F LM YKI P +H ACMVDLL RAG+V+EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + MS EP VW ALL C H IG A K+ +L P+ G + L+SN +A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+WEEV +R M+ G+KK PG S VEVN +H F++ D+SH Q ++I L L +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 554 RAI 556
+ +
Sbjct: 586 KEL 588
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 52/402 (12%)
Query: 54 KESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFV 113
++SP E + L Q++ D PD T + + + L DL+ +
Sbjct: 35 QKSPQETVFLLGQVL--DTYPDIRTLRT-VHSRIILEDLRCNSSL--------------- 76
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
G ++ Y + A F+++ ++++ + MI V NG E V + M +
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV 136
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D +++AC+ G G +HG + + L+ + V LV MY K G L A
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
V MSR ++V+W +L+ G+AQN LE+ EM+S D+ ++ S L A +
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-- 254
Query: 294 LKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
T+ MY K +F +M + L+SWNV+I Y
Sbjct: 255 ----------------------TTENVMYVK--------DMFFKMGKKSLVSWNVMIGVY 284
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+ EA+ L+ +M +PD + S+L A + + G+ + + K+ P
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-IERKKLIPN 343
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G +E+A + ++M + + W A++S
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 304/543 (55%), Gaps = 34/543 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y D+ SARK+F+E+P R V N +I +Y E + ++ M +VRP
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF LKAC + +G +I A ++G + +FVG+ ++++Y KCG ++EA +
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M R+D+V W+S++ G N + +A++ + M+ I D M L+ A ++
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN----- 253
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
T+ MY K +F M + ++V+W +I +
Sbjct: 254 --------------------TTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+N + +EL M++ GFEPD+VS+ S L AC L LGK IHGY R + NL+
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L ++IDMY+KCG AR +F+ M+SRD++SW +I++YG G G +A++LF ++ ++
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ PD F + L+A SH+GL+EEGR F LM YKI P +H ACMVDLL RAG+V+EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + MS EP VW ALL C H IG A K+ +L P+ G + L+SN +A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+WEEV +R M+ G+KK PG S VEVN +H F++ D+SH Q ++I L L +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 554 RAI 556
+ +
Sbjct: 586 KEL 588
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 52/402 (12%)
Query: 54 KESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFV 113
++SP E + L Q++ D PD T + + + L DL+ +
Sbjct: 35 QKSPQETVFLLGQVL--DTYPDIRTLR-TVHSRIILEDLRCNSSL--------------- 76
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
G ++ Y + A F+++ ++++ + MI V NG E V + M +
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV 136
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D +++AC+ G G +HG + + L+ + V LV MY K G L A
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
V MSR ++V+W +L+ G+AQN LE+ EM+S D+ ++ S L A +
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-- 254
Query: 294 LKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
T+ MY K +F +M + L+SWNV+I Y
Sbjct: 255 ----------------------TTENVMYVK--------DMFFKMGKKSLVSWNVMIGVY 284
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+ EA+ L+ +M +PD + S+L A + + G+ + + K+ P
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-IERKKLIPN 343
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G +E+A + ++M + + W A++S
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 308/540 (57%), Gaps = 2/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LY ARK+F+ +P R +N++I +SR + + ++ M+ + D
Sbjct: 154 IVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFD 213
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T L A L + ++G I A + G +DV+V + +++LY KCGK + + F+
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFD 273
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + DL+ +++MI+G FN + AV ++ + G + ++GLI +
Sbjct: 274 QIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQL 333
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ S++ + L V T+L +Y + + A +F ++ +W A+ISG+ Q
Sbjct: 334 SRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQ 393
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
NGL + L EM P+ V++ S L ACAQ+G L +GK +HG R + N+ +
Sbjct: 394 NGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY+KCG AR LFD M +++++WN +I YG+HGHG+EAL LF +M+++ +
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P TF S+L A SHSGLV EG F M + Y QP +HYACMVD+L RAG++ AL
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++ M EPG AVW ALL C HK + +K++ +L+P+++G + L+SN ++ ++
Sbjct: 573 EFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDR 632
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ + A VR+ ++K + K PG +++E++ + + F D+SH Q I +L+KL +MR
Sbjct: 633 NFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMR 692
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 223/443 (50%), Gaps = 13/443 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRPDSSTFTVALK 84
+ R+LF ++ + +N +I +S P + LY + K ++RPD+ T+ A+
Sbjct: 62 VAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAIS 121
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
A L D ++G + ++ G +++FVGS++++LY K + A F+ M +D V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W++MI+G N +++ + M G+ D + ++ A A+L + R G+ + +
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLAS 241
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
++ L+ DV V T L+ +Y+K G +F + + +++++ A+ISG+ N S +
Sbjct: 242 KKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVT 301
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL----GTSVID 320
L E+ + G +S +LV + L+L + I +++ ++L T++
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLK---IGIILQPSVSTALTT 358
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
+Y + AR LFD+ + L SWN +I+ Y +G + A+SLF +M+ + P+ T
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQL-SPNPVT 417
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+LSA + G + G+ W ++ +++ +VD+ A+ G + EA ++ D M
Sbjct: 418 VTSILSACAQLGALSIGK-WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM 476
Query: 441 STEPGLAVWVALLS--GCHNHKK 461
+ + W A+++ G H H K
Sbjct: 477 -VDKNVVTWNAMITGYGLHGHGK 498
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 135/269 (50%), Gaps = 9/269 (3%)
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
L + I ++ D+ T L + G + +F +S+ ++ + LI GF+ N
Sbjct: 31 LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90
Query: 257 GLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
GL S++ L ++ PD+ + A+ A +++ ++G +H ++ V NL +
Sbjct: 91 GLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFV 150
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++D+Y K AR +FD M RD + WN +I+ + + + E+++ +F+ M++ +
Sbjct: 151 GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL 210
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAGEVEE 432
D +T A++L+A++ ++E R + + SK + ++ L ++ G+ +
Sbjct: 211 SFDSTTLATVLTAVAE---LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCK 267
Query: 433 ALKIVDSMSTEPGLAVWVALLSG-CHNHK 460
+ D + +P L + A++SG NH+
Sbjct: 268 GRILFDQID-QPDLISYNAMISGYTFNHE 295
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 308/540 (57%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + AR++F+ + R + ++ ++I A+ E Y M +PD
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L A + L++G+++ + + G + VG+S++ +Y KCG +++A V F+
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ K++V W+ +I G GQ A++ ++M++ + +++ ++Q C
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y I+ ++ V +L+ MY K G L A +F ++ ++VTW A+++G+AQ
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G ++L MQ G +PD ++ SAL +C+ FL+ GKSIH V + ++ L
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYL 436
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++ MY+KCG AR +F+QM R++++W +I HG EAL F QM + +
Sbjct: 437 QSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGI 496
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF S+LSA +H GLVEEGR F M Y I+P +HY+C VDLL RAG +EEA
Sbjct: 497 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 556
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ +M +PG +VW ALLS C H GE+ A+ VLKL+PDD G + +SN +A
Sbjct: 557 NVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAG 616
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
++E+ VR+ M K + K PG S +EV+G++H F +EDKSH + ++I L KL +++
Sbjct: 617 RYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIK 676
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 240/466 (51%), Gaps = 17/466 (3%)
Query: 34 EELP----LRGVDTY-NSIIIAYSRKESPF-EVLGLYNQMIKEDVRPDSSTFTVALKACV 87
++LP R VDT NS ++ K+ E LG+ N MI + R S F L+ C
Sbjct: 48 DQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECA 107
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L L+ G E+ ++ G + ++ +++L++Y KCG + +A F+ ++ +++V W++
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTA 167
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI V Q EA Y+ MK G D+V + L+ A + + G VH +
Sbjct: 168 MIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG 227
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L L+ +V TSLV MYAK G + A +F + N+VTW LI+G+AQ G LELL
Sbjct: 228 LELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLE 287
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+MQ P+ ++ S L C L+ GK +H Y ++ + + + ++I MY KCG
Sbjct: 288 KMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCG 347
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LF + RD+++W ++ Y G +EA+ LF +M + +KPD TF S L+
Sbjct: 348 GLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALT 407
Query: 387 ALSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ S ++EG+ +V + Y + + + +V + A+ G +++A + + MS E
Sbjct: 408 SCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMS-ERN 464
Query: 446 LAVWVALLSGCHNHKK----FSIGEKVAKKVLKLNPDDLGIHALVS 487
+ W A+++GC H + E++ K+ +K PD + +++S
Sbjct: 465 VVAWTAMITGCAQHGRCREALEYFEQMKKQGIK--PDKVTFTSVLS 508
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 143/256 (55%), Gaps = 15/256 (5%)
Query: 7 SAYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S YG V +I +Y + ARKLF +LP R V T+ +++ Y++ E + L
Sbjct: 327 SGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDL 386
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ +M ++ ++PD TFT AL +C S L+ G+ I ++ V GY DV++ S+++++Y K
Sbjct: 387 FRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAK 446
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG M++A + F +M +++V W++MI G +G+ REA++ +++MKK+GI D+V +
Sbjct: 447 CGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSV 506
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVFKN 237
+ AC + GL G R + LD ++ + VD+ + GHL+ A +V
Sbjct: 507 LSAC-----THVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILT 561
Query: 238 MS-RINIVTWGALISG 252
M + WGAL+S
Sbjct: 562 MPFQPGPSVWGALLSA 577
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 317/573 (55%), Gaps = 32/573 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I YG +I R++F+++ R V ++ S+I Y+++ E + L+ +M++ +RP+
Sbjct: 180 LIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPN 239
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + AC L DL++GE++ EL + + ++++++Y+KCG +++A F+
Sbjct: 240 SVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFD 299
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ K+LV ++++++ V G RE + M K G D + M+ + AC++L D
Sbjct: 300 ECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSC 359
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G HGY +R L V ++++MY K G ++A VF M V+W +LI+GF +
Sbjct: 360 GKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVR 419
Query: 256 NG-------------------------------LAGSTLELLMEMQSCGFEPDSVSLVSA 284
NG + +EL MQS G D V++V
Sbjct: 420 NGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGV 479
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
AC +G L L K IHGY ++ F++ LGT+++DM+++CG P A +F++M RD+
Sbjct: 480 ASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDV 539
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+W I + + G+G A+ LF +M++ +KPD F +LL+ALSH GLVE+G + F
Sbjct: 540 SAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRS 599
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
M Y I P HY CMVDLL RAG + EAL +++SM EP +W +LL+ C HK
Sbjct: 600 MKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVD 659
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
I A+++ +L+P+ GIH L+SN +A +W++VA VR +++ G K+PG S +E+N
Sbjct: 660 IAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEIN 719
Query: 524 GELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
G++ F D+SH + I +LK++ +R I
Sbjct: 720 GKIFEFTTGDESHPEMTHIEPMLKEICCRLRDI 752
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 216/442 (48%), Gaps = 34/442 (7%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
++S+I +S ++ + ++ Q++ PD+ TF L AC L G ++ V
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
++G+ D+FV +S+++ Y +CG+++ F+KM +++V W+S+I G G +EAV
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ M + GI + V M+G+I ACA L D + G V L ++ + +LVDMY
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G +D A +F N+V + ++S + + GLA L +L EM G PD ++++S
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
A+ AC+++ + GK HGY +R + + ++I+MY KCG A +FD+M ++
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 343 LISWNVIIASYGIHGHGE-------------------------------EALSLFLQMIE 371
+SWN +IA + +G E EA+ LF M
Sbjct: 407 RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ D T + SA + G ++ + W + K I +VD+ AR G+ +
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAK-WIHGYIKKKDIHFDMHLGTALVDMFARCGDPQ 525
Query: 432 EALKIVDSMSTEPGLAVWVALL 453
A+++ + M + ++ W A +
Sbjct: 526 SAMQVFNKM-VKRDVSAWTAAI 546
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 214/447 (47%), Gaps = 63/447 (14%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ +Y I ARK+F+E + + YN+I+ Y R+ EVL + +M+K
Sbjct: 278 VNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP 337
Query: 73 RPDSSTFTVALKACVSLMDLKMGE----EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
RPD T A+ AC L D+ G+ + R +E G+ N V ++++N+Y+KCGK
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLE-GWDN---VCNAIINMYMKCGKQE 393
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQ-----------P------------------- 158
A F++M K V W+S+I G V NG P
Sbjct: 394 MACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESM 453
Query: 159 -REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
+EA++ ++ M+ EGI AD+V M+G+ AC LG +HGY ++ ++ D+ + T+
Sbjct: 454 FKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTA 513
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
LVDM+A+ G A VF M + ++ W A I A G +EL EM G +PD
Sbjct: 514 LVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPD 573
Query: 278 SVSLVSALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSC 330
V V+ L A + G ++ G K I+G + + ++D+ + G+ S
Sbjct: 574 GVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYG-----CMVDLLGRAGLLSE 628
Query: 331 ARALFD--QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A +L + QM+ D+I W ++A+ +H + + A ++ E + P+ + LLS +
Sbjct: 629 ALSLINSMQMEPNDVI-WGSLLAACRVHKNVDIAAYAAERISE--LDPERTGIHVLLSNI 685
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEK 415
S GR W D V+K ++ EK
Sbjct: 686 YASA----GR-WDD--VAKVRLHLKEK 705
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 308/542 (56%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
+I LY + A K+F E P V + SII Y + SP L +++M+ E V P
Sbjct: 145 LIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSP 204
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T A AC L D +G + G+ + + +S+LNLY K G + A F
Sbjct: 205 DPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLF 264
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+M KD++ WSSM+ NG A++ + M + I+ + V ++ ++ACA +
Sbjct: 265 REMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE 324
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ LD+ V T+L+DMY K + A +F M + ++V+W L SG+A
Sbjct: 325 EGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYA 384
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+ G+A +L + M S G PD+++LV L A +++G ++ +H + + FD N
Sbjct: 385 EIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEF 444
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-T 372
+G S+I++Y+KC A +F ++ D+++W+ IIA+YG HG GEEAL L QM +
Sbjct: 445 IGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHS 504
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF S+LSA SH+GL+EEG F +MV++Y++ P +HY MVDLL R GE+++
Sbjct: 505 DVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDK 564
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL ++++M + G VW ALL C H+ IGE A + L+P+ G + L+SN + +
Sbjct: 565 ALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCV 624
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ W + A +R ++++ +KK+ G S+VE+ E+H+FI D+ H + + I +L+KL
Sbjct: 625 DKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLDAR 684
Query: 553 MR 554
MR
Sbjct: 685 MR 686
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 252/462 (54%), Gaps = 14/462 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L+ V ++ LY + A KLFEE P + V +N+++ +Y + E L
Sbjct: 28 LKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETL 87
Query: 62 GLYNQMIKEDV---RPDSSTFTVALKACVSLMDLKMGEEI---WRKAVELGYGNDVFVGS 115
L++QM + V RPD+ T ++ALK+C L L++G+ I +K ++ +D+FVGS
Sbjct: 88 SLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKID----SDMFVGS 143
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGID 174
+++ LY KCG+MN+A+ F + + D+V W+S+I G NG P A+ + RM E +
Sbjct: 144 ALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVS 203
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D V ++ ACA L D G SVHG+ RR + + + S++++Y KTG + +A+++
Sbjct: 204 PDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANL 263
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F+ M +I++W ++++ +A NG + L L EM E + V+++SAL ACA L
Sbjct: 264 FREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNL 323
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK IH V F+ ++ + T+++DMY KC P A LF++M +D++SW V+ + Y
Sbjct: 324 EEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGY 383
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G ++L +F M+ +PD +L+A S G+V++ V+K
Sbjct: 384 AEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQA-LCLHAFVTKSGFDNN 442
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
E A +++L A+ ++ A K+ + + W ++++
Sbjct: 443 EFIGASLIELYAKCSSIDNANKVFKGLR-HTDVVTWSSIIAA 483
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 193/378 (51%), Gaps = 11/378 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C S + + ++ + +++G D FV + + LY + + A FE+ K +
Sbjct: 11 LETCCSKISIT---QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGID---ADEVVMMGLIQACADLGDSRFGLSV 199
W++++ G+ E + + +M + + D + +++C+ L G +
Sbjct: 68 YLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMI 127
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG+ +++ ++ D+ V ++L+++Y+K G ++ A VF + ++V W ++I+G+ QNG
Sbjct: 128 HGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSP 186
Query: 260 GSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L M PD V+LVSA ACAQ+ LG+S+HG+ RR FD L L S
Sbjct: 187 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 246
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++++Y K G A LF +M +D+ISW+ ++A Y +G AL+LF +MI+ ++ +
Sbjct: 247 ILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 306
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T S L A + S +EEG+ L V+ Y + ++D+ + E A+++
Sbjct: 307 RVTVISALRACASSSNLEEGKQIHKLAVN-YGFELDITVSTALMDMYLKCFSPENAIELF 365
Query: 438 DSMSTEPGLAVWVALLSG 455
+ M + + W L SG
Sbjct: 366 NRMPKK-DVVSWAVLFSG 382
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 9/225 (4%)
Query: 179 VMMGLIQACADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++ L++ C S+ ++ +H ++ L LD V T L +YA+ L A +F+
Sbjct: 6 LLVKLLETCC----SKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEE 61
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF---EPDSVSLVSALLACAQIGFL 294
+ W AL+ + G TL L +M + PD+ ++ AL +C+ + L
Sbjct: 62 TPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKL 121
Query: 295 KLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+LGK IHG+ ++ D ++ +G+++I++YSKCG + A +F + D++ W II Y
Sbjct: 122 ELGKMIHGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYE 181
Query: 355 IHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGR 398
+G E AL+ F +M+ V PD T S SA + GR
Sbjct: 182 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGR 226
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 304/509 (59%), Gaps = 3/509 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+ + +++ + L LY QM++ RP++ TF ALK+C +L +G + +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK--MQRKDLVCWSSMINGLVFNGQPREA 161
++G + FV + ++++Y K ++ A FE+ RK VC++++++G V N + +A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
V +++M +EG+ + V ++GLI AC + G S+H +++ + DV V + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y K G ++ A +F M +++W A++SG+AQNGLA + LEL M G PD V+L
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 282 VSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
V L +CA +G +G + F N L ++I+MY++CG + A+A+FD M
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
R L+SW II YG+HGHGE A+ LF +MI + ++PD + F +LSA SH+GL ++G +
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F +M Y+++P +HY+CMVDLL RAG ++EA +++SM +P AVW ALL C HK
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+ E ++V++L P+++G + L+SN ++ + V +R M++ +KK PG S V
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
E+ G +H FI+ D++H Q ++I VL++L
Sbjct: 488 ELKGRVHPFIVGDRNHLQSDEIYRVLEEL 516
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 208/409 (50%), Gaps = 23/409 (5%)
Query: 16 IIALYGGKNDIVSARKLFEE--LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++Y + + +ARK+FEE + YN+++ Y + + L+ QM +E V
Sbjct: 81 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP 140
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+S T + ACVS ++L++G + ++ G+ +DV V + + +Y+KCG +N A
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG-- 191
F++M K L+ W++M++G NG ++ Y+ M G+ D V ++G++ +CA+LG
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 192 ----DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ F + G++ LN +L++MYA+ G+L A VF M +V+W
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLN------NALINMYARCGNLTKAQAVFDGMPERTLVSWT 314
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+I G+ +G ++L EM G EPD + V L AC+ G G + + + +
Sbjct: 315 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG--LEYFKMMK 372
Query: 308 FDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
++ L G + ++D+ + G A+ L + M + D W ++ + IH + E A
Sbjct: 373 RNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELA 432
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
F ++IE ++P++ + LLS + + +G +M+ + K++
Sbjct: 433 ELAFERVIE--LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK 479
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V I +Y + A+KLF+E+P++G+ ++N+++ Y++ VL LY M V
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T L +C +L +G E+ K G+ ++ F+ ++++N+Y +CG + +A
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQA 300
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M + LV W+++I G +G AV +K M + GI+ D + ++ AC+ G
Sbjct: 301 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 360
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
+ GL + ++R+ L+ + + +VD+ + G L A + ++M + + WGAL
Sbjct: 361 TDQGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGAL 419
Query: 250 I 250
+
Sbjct: 420 L 420
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 313/540 (57%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + A +LFE LP + T+N +I + E LGL+ M++ RPD
Sbjct: 283 LLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPD 342
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A L LK G+E+ + D F+ S+++++Y KC + A ++
Sbjct: 343 SVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYD 402
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V S++I+G V NG +A+ ++ + ++ I + V + ++ ACA +
Sbjct: 403 AARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPL 462
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY +R V+++L+DMYAK G LDL+ ++F MS + VTW ++IS F+Q
Sbjct: 463 GQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQ 522
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG L+L +M G + ++V++ SAL ACA + + GK IHG ++ ++
Sbjct: 523 NGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFA 582
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMY+KCG A +F+ M ++ +SWN II++YG HG +E++S +M E
Sbjct: 583 ESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGY 642
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPDH TF +L+SA +H+GLVEEG F M +Y I P +H+ACMVDL +R+G +++A+
Sbjct: 643 KPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAI 702
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M +P +W ALL C H+ + + ++++ KL+P + G + L+SN A+
Sbjct: 703 QFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAG 762
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V+ VR+ M+ + + K+PGYS V+VN H F+ DKSH + EDI LK L E+R
Sbjct: 763 RWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELR 822
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 249/475 (52%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR F+ +P R +N ++ Y + + L+ M P+
Sbjct: 182 LIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPN 241
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C + DL G ++ AV+ G +V V +++L++Y KC +++A FE
Sbjct: 242 FATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFE 301
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ R DLV W+ MI+G V NG EA+ + M + G D V ++ L+ A DL +
Sbjct: 302 LLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQ 361
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHGY IR +++D + ++LVD+Y K + A +++ I++V +ISG+
Sbjct: 362 GKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVL 421
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG++ L++ + +P++V++ S L ACA I L LG+ IHGY +R ++ +
Sbjct: 422 NGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYV 481
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY+KCG + +F +M +D ++WN +I+S+ +G +EAL LF QM +
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGI 541
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K ++ T +S LSA + + G+ +++ K I+ + ++D+ A+ G +E AL
Sbjct: 542 KYNNVTISSALSACASLPAIYYGKEIHGVII-KGPIKADIFAESALIDMYAKCGNMELAL 600
Query: 435 KIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
++ + M + ++ W +++S G H K S+ + PD + AL+S
Sbjct: 601 RVFEFMPDKNEVS-WNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALIS 654
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 176/317 (55%), Gaps = 1/317 (0%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T +K+C +L + +G + R A G +DV+VGS+++ +Y G + +A A
Sbjct: 139 PDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDA 198
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D V W+ M++G + G AV ++ M+ G + + + + CA D
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADL 258
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G+ +H +++ L +V V +L+ MYAK LD A +F+ + R ++VTW +ISG
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGC 318
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNGL L L +M G PDSV+LVS L A + LK GK +HGY +R +
Sbjct: 319 VQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDA 378
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++++D+Y KC AR L+D ++ D++ + +I+ Y ++G E+AL +F ++E
Sbjct: 379 FLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ 438
Query: 373 MVKPDHSTFASLLSALS 389
+KP+ T AS+L A +
Sbjct: 439 CIKPNAVTVASVLPACA 455
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 174/316 (55%), Gaps = 2/316 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ +Y D+ +AR L++ V +++I Y + L ++ ++++ +
Sbjct: 381 VSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCI 440
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P++ T L AC S+ L +G+EI + Y +V S+++++Y KCG+++ +
Sbjct: 441 KPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHY 500
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F KM KD V W+SMI+ NG+P+EA+D +++M EGI + V + + ACA L
Sbjct: 501 IFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPA 560
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G +HG I+ + D+ +++L+DMYAK G+++LA VF+ M N V+W ++IS
Sbjct: 561 IYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISA 620
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+ +GL ++ L MQ G++PD V+ ++ + ACA G ++ G + + +
Sbjct: 621 YGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAP 680
Query: 313 VLG--TSVIDMYSKCG 326
+ ++D+YS+ G
Sbjct: 681 RMEHFACMVDLYSRSG 696
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 303/540 (56%), Gaps = 21/540 (3%)
Query: 18 ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSS 77
L G+ND +F +N+II + P E Y +M E V PD
Sbjct: 90 TLKAGENDPTHEINVF---------AFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 140
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF A+KAC+ ++++K +I + G DVF+GS+++N Y+K G M A VAFE++
Sbjct: 141 TFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 197
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+D+V W++M+NG GQ ++ ++RM E + + G + A +GD G
Sbjct: 198 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGR 257
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+HG++++ + V V SL+DMY K ++ A +F+ M +I +W +++S Q G
Sbjct: 258 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCG 317
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--------RRFD 309
TL LL M G +PD V++ + L AC+ + L G+ IHGY + + D
Sbjct: 318 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 377
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+++L +VIDMY+KCG A +F++M ++D+ SWN++I YG+HG+G EAL +F +M
Sbjct: 378 -DVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRM 436
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
E +KPD TF +LSA SH+G V +GR + M SKY + PT +HY C++D+L RAG+
Sbjct: 437 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQ 496
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA ++ +M E VW ALL+ C HK + E A++V +L P+ G + L+SN
Sbjct: 497 LDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNV 556
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ ++EEV VR TMR+ ++K PG S +E+ +H F+ D++H + I L L
Sbjct: 557 YGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSL 616
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 14/247 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG I A ++FE + + + ++NSI+ + + L L ++M+ ++PD
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYG------NDVFVGSSMLNLYVKCGKMNE 129
T T L AC L L G EI + G G +DV + ++++++Y KCG M +
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + FE+M KD+ W+ MI G +G EA++ + RM + + DEV +G++ AC+
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQ----TSLVDMYAKTGHLDLASHVFKNMS-RINIV 244
G F + ++ DV T ++DM + G LD A + M N V
Sbjct: 458 AG---FVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPV 514
Query: 245 TWGALIS 251
W AL++
Sbjct: 515 VWRALLA 521
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 307/541 (56%), Gaps = 15/541 (2%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTY--NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
+Y N + A +F + P ++ + N+II + P E Y +M E V PD
Sbjct: 1 MYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDK 59
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
TF A+KAC+ ++++K +I + G DVF+GS+++N Y+K G M A VAFE+
Sbjct: 60 FTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ +D+V W++M+NG GQ ++ ++RM E + + G++ A +GD G
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+HG++++ + V V SL+DMY K ++ A +F+ M +I +W ++ S Q
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQC 236
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--------RRF 308
G TL LL M G +PD V++ + L AC+ + L G+ IHGY + +
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D +++L +VIDMY+KCG A +F++M ++D+ SWN++I YG+HG+G EAL +F +
Sbjct: 297 D-DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSR 355
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M E +KPD TF +LSA SH+G V +GR + M SKY + PT +HY C++D+L RAG
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAG 415
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+++EA ++ +M E VW ALL+ C HK + E A++V +L P+ G + L+SN
Sbjct: 416 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 475
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+ ++EEV VR TMR+ ++K PG S +E+ +H F+ D++H + I L
Sbjct: 476 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNS 535
Query: 549 L 549
L
Sbjct: 536 L 536
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG I A ++FE + + + ++NSI + + L L ++M+ ++PD
Sbjct: 198 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPD 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYG------NDVFVGSSMLNLYVKCGKMNE 129
T T L AC L L G EI + G G +DV + ++++++Y KCG M +
Sbjct: 258 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 317
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + FE+M KD+ W+ MI G +G EA++ + RM + + DEV +G++ AC+
Sbjct: 318 AHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 377
Query: 190 LGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
G G + ++ + ++ T ++DM + G LD A + M N V W
Sbjct: 378 AGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 437
Query: 248 ALISG 252
AL++
Sbjct: 438 ALLAA 442
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 307/565 (54%), Gaps = 39/565 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF +P R T+NS++ +++ + E L + M KE + +F L AC
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSG 164
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D+ G ++ + + +DV++GS+++++Y KCG +N+A F++M +++V W+S+
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSL 224
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-H 207
I NG EA+D ++ M + ++ DEV + +I ACA L + G VHG ++
Sbjct: 225 ITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNM----------------------------- 238
L D+ + + VDMYAK + A +F +M
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344
Query: 239 --SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+ N+V+W ALI+G+ QNG L L ++ P S + L ACA + L L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404
Query: 297 GKSIHGYTVRR-FDF------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
G H + ++ F F ++ +G S+IDMY KCG +F +M RD +SWN +
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I + +G+G EAL LF +M+E+ KPDH T +LSA H+G VEEGR++F M +
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ P HY CMVDLL RAG +EEA +++ M +P +W +LL+ C H+ ++G+ VA
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVA 584
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+L++ P + G + L+SN +A KWE+V VRK+MRK G+ K PG S +++ G H F
Sbjct: 585 EKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVF 644
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMR 554
+++DKSH + + I +L L EMR
Sbjct: 645 MVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 210/451 (46%), Gaps = 71/451 (15%)
Query: 75 DSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
DSS F L +C+ S + + ++ G+ N++F+ + +++ Y KCG + +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 134 FEKMQRKDLVCWSSMINGL-----------VFNGQPR--------------------EAV 162
F+KM ++++ W+S++ GL +F P EA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+ M KEG +E ++ AC+ L D G+ VH + DV + ++LVDMY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+K G+++ A VF M N+V+W +LI+ F QNG A L++ M EPD V+L
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 283 SALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKC-----------GVP- 328
S + ACA + +K+G+ +HG V+ + +++L + +DMY+KC +P
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 329 -------------------SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
AR +F +M R+++SWN +IA Y +G EEALSLF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHY----ACMVDLL 424
V P H +FA++L A + + G + ++ +K Q E+ ++D+
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G VEE + M E W A++ G
Sbjct: 438 VKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 223/489 (45%), Gaps = 84/489 (17%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ A+++F+E+ R V ++NS+I + + E L ++ M++ V PD
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + AC SL +K+G+E+ + V+ ND+ + ++ +++Y KC ++ EA F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 135 E-------------------------------KMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ KM +++V W+++I G NG+ EA+
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV------HGYSIRRHLNLDVKVQTS 217
+ +K+E + +++ACADL + G+ HG+ + D+ V S
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMY K G ++ VF+ M + V+W A+I GFAQNG LEL EM G +PD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
++++ L AC GF++ G+ R F G + + + C V RA
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDF------GVAPLRDHYTCMVDLLGRA---- 542
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEE 396
G EEA S MIE M ++PD + SLL+A +
Sbjct: 543 -------------------GFLEEAKS----MIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 397 GRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGEVEEALKIVDSMSTE-----PGLAVWV 450
G+Y + ++ +++P+ Y + ++ A G+ E+ + + SM E PG + W+
Sbjct: 580 GKYVAEKLL---EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS-WI 635
Query: 451 ALLSGCHNH 459
+ H+H
Sbjct: 636 KIQG--HDH 642
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 316/521 (60%), Gaps = 14/521 (2%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K + P S+F A+KAC SL+D+ G++ +
Sbjct: 41 VFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQ 100
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A GY +D+FV S+++ +Y CGK+ +A F+++ ++++V W+SMI G NG +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 161 AVDAYKRMKKEGIDADEVV------MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
AV +K + E D D + M+ +I AC+ + S+H + I+R + V V
Sbjct: 161 AVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSV 220
Query: 215 QTSLVDMYAKTGH--LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL---LMEM 269
+L+D YAK G + +A +F + + V++ +++S +AQ+G++ ++ L++
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKE 280
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVP 328
+ F + ++L + LLA + G L++GK IH +R + ++++GTS+IDMY KCG
Sbjct: 281 KVVTF--NCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
AR FD+M+++++ SW +IA YG+HGH +AL LF MI++ V+P++ TF S+L+A
Sbjct: 339 ETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
SH+GL + G +WF+ M ++ ++P +HY CMVDLL RAG +++A ++ M EP +
Sbjct: 399 SHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSII 458
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
W +LL+ C HK + E ++ +L+P + G + L+S+ +A +W++V VR TM+
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKN 518
Query: 509 SGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
G+ K PG+S++E+NGE+H F++ D+ H Q E I L +L
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 195/402 (48%), Gaps = 23/402 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + ARK+F+E+P R + ++ S+I Y + + + L+ ++ E+ D
Sbjct: 117 LIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDD 176
Query: 76 SSTF------TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
++ F + AC + + E I ++ G+ V VG+++L+ Y K G+
Sbjct: 177 ATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 130 AMVA--FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQA 186
A+ F+++ KD V ++S+++ +G EA D ++R+ KE + + + + ++ A
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLA 296
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+ G R G +H IR L DV V TS++DMY K G ++ A F M N+ +W
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSW 356
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+I+G+ +G A LEL M G P+ ++ VS L AC+ G +G H +
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVG--WHWFNAM 414
Query: 307 RFDFNLVLGT----SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEE 361
+ F + G ++D+ + G A L +M+ D I W+ ++A+ IH + E
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVEL 474
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
A ++ E + P + + LLS + + GR W D+
Sbjct: 475 AEISVARLFE--LDPSNCGYYMLLSHI----YADSGR-WKDV 509
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 177/353 (50%), Gaps = 23/353 (6%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + D+ W+S+I L +G EA+ A+ M+K + I+AC+ L D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
H + D+ V ++L+ MY+ G L+ A VF + + NIV+W ++I G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 257 GLAGSTLELLMEM------QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G A + L ++ DS+ +VS + AC+++ L +SIH + ++R FD
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215
Query: 310 FNLVLGTSVIDMYSKCGVP--SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ +G +++D Y+K G + AR +FDQ+ +D +S+N I++ Y G EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275
Query: 368 QMI-ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++I E +V + T +++L A+SHSG + G+ D ++ + ++ ++D+ +
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIVGTSIIDMYCK 334
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNP 477
G VE A D M + + W A+++ G H H A K L+L P
Sbjct: 335 CGRVETARLAFDRMKNK-NVRSWTAMIAGYGMHGH---------AAKALELFP 377
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 318/554 (57%), Gaps = 5/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIA--LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M+ T + S+ ++IA L G + A +F V T+NS++ A+ P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60
Query: 59 EVLGLYNQMIKEDVR-PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L Y +M++ PD TF LK C L++ K+G+ + + V+ +D+++ +++
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
LN+Y CG + A FE+M ++ V W+SMI+G + N P EA+ YK+M+++G DE
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V M L+ ACA+L D G+ +H + + + + ++LV+MYAK G L A VF
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKL 296
+S ++ W ALI G+ +N + L+L E+ P+ V++++ + ACAQ+G L+
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ +H Y R + ++ L S+IDM+SKCG A+ +FD M +DLISWN ++ + +
Sbjct: 301 GRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFAL 360
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HG G EAL+ F M T ++PD TF +L+A SH+GLV+EG+ F + + Y ++ +
Sbjct: 361 HGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE 420
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVDLL RAG + EA + + M +P A+W ++L C + +GE+ A+ +LKL
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKL 480
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
P + G++ L+SN +A + W EV VR+ M + G++K PG S V ++ H+F+ D S
Sbjct: 481 EPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCS 540
Query: 536 HNQYEDIVYVLKKL 549
H + +I +L+++
Sbjct: 541 HPEIAEISIMLRQV 554
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/591 (32%), Positives = 315/591 (53%), Gaps = 46/591 (7%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI A LF + + +NS+I S SP L + +MI V P+S TF LK
Sbjct: 78 DISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLK 137
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK-------- 136
+C L G++I ++LG+ +DVF+ +S++N+Y + G+MN A + F++
Sbjct: 138 SCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAIS 197
Query: 137 -----------------------MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
M KD+V W++MI G G+ +EA+ ++ M+K +
Sbjct: 198 FTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANV 257
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
+E ++ ++ ACA G S+ + R L ++K+ +L+DMY+K G L A
Sbjct: 258 PPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARE 317
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
+F +M ++++W +I G+ L L EM + G EP ++ +S L +CA +G
Sbjct: 318 LFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA 377
Query: 294 LKLGKSIHGYTVRRFDFNLVLGTSV-IDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ LGK IH Y + F+ ++ ID+Y+KCG AR +FD M+ + L SWN +I
Sbjct: 378 IDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICG 437
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+HG ++A LF +M ++P+ TF +LSA H+GLV+ G+ +F MV YKI P
Sbjct: 438 LAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISP 497
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+HY CM+DLL RAG EEA ++ +M +P A+W +LL C +H + +GE VA+++
Sbjct: 498 KSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERL 557
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+L PD+ G + L+SN +A KW++VA +R + GMKKVPG + +EV+ +H F++
Sbjct: 558 FELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVG 617
Query: 533 DKSHNQYEDIVYVLKKLYLEMRAI--------------SSWLQGHMEEHEE 569
DK H Q EDI +L+++ +++ W +G + H E
Sbjct: 618 DKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSE 668
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 309/539 (57%), Gaps = 7/539 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + AR +F+++ R V +++++I + SR + L L +M VRP
Sbjct: 135 LMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPS 194
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG----SSMLNLYVKCGKMNEAM 131
+ +++MG+ + A + N+ +G +++L++Y KCG + A
Sbjct: 195 EVAMVSMVNLFADTANMRMGKAM--HAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 252
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F + +K +V W++MI G + + + E + RM++E I +E+ M+ LI C G
Sbjct: 253 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTG 312
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G +H Y +R ++ + + T+LVDMY K + A +F + +++ W A++S
Sbjct: 313 ALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLS 372
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+AQ L +M++ G P V++VS L CA G L LGK +H Y + R +
Sbjct: 373 AYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV 432
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +L T+++DMY+KCG + A LF + SRD+ WN II + +HG+GEEAL +F +M
Sbjct: 433 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME 492
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
VKP+ TF LL A SH+GLV EG+ F+ MV + + P +HY CMVDLL RAG +
Sbjct: 493 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLL 552
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA +++ SM +P VW AL++ C HK +GE A ++L++ P++ G + L+SN +
Sbjct: 553 DEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIY 612
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A +W + AGVRKTM+ GMKK PG+SV+EVNG +H F+M D+SH Q I +L ++
Sbjct: 613 AAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 671
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 216/381 (56%), Gaps = 7/381 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
LKAC + ++G+EI ++ G DVFVG++++ +Y +C + A + F+KM +D+
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 160
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V WS+MI L N + A++ + M + EV M+ ++ AD + R G ++H Y
Sbjct: 161 VSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAY 220
Query: 203 SIRRHLN--LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
IR N + V T+L+DMYAK GHL LA +F +++ +V+W A+I+G ++
Sbjct: 221 VIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 280
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
+L + MQ P+ ++++S ++ C G L+LGK +H Y +R F +L L T+++
Sbjct: 281 EGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALV 340
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMY KC ARALFD Q+RD++ W ++++Y ++A +LF QM + V+P
Sbjct: 341 DMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKV 400
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI-VD 438
T SLLS + +G ++ G+ W + K +++ +VD+ A+ G++ A ++ ++
Sbjct: 401 TIVSLLSLCAVAGALDLGK-WVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 459
Query: 439 SMSTEPGLAVWVALLSGCHNH 459
++S + + +W A+++G H
Sbjct: 460 AISRD--ICMWNAIITGFAMH 478
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 137/276 (49%), Gaps = 5/276 (1%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+++AC + ++ G +HG+ +++ L+ DV V +L+ MY + ++ A VF M +
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W +I ++N LEL+ EM P V++VS + A +++GK++H
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 303 YTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
Y +R + + T+++DMY+KCG AR LF+ + + ++SW +IA
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EE LF++M E + P+ T SL+ +G ++ G+ + + +
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQ-LHAYILRNGFSVSLALATA 338
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ + ++ A + DS + +W A+LS
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRD-VMIWTAMLSA 373
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 316/591 (53%), Gaps = 35/591 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGK--NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
MI T L + G ++ R++A ++ K+ V ++N I Y E+P
Sbjct: 77 MISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPI 136
Query: 59 EVLGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ LY M+++ PD+ T+ + K C EI ++LG+ +D+FV +++
Sbjct: 137 NAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAI 196
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++ V CG++ A F++ +DLV W+S+ING V G EA D Y +M + + DE
Sbjct: 197 IHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDE 256
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V M+G++ A A L + G +H LNL V + +L+DMY K +++ A +F+N
Sbjct: 257 VTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFEN 316
Query: 238 MSRINIVTW-------------------------------GALISGFAQNGLAGSTLELL 266
M++ +V+W ALI GF Q + L L
Sbjct: 317 MTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALF 376
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EMQ+ PD +++V+ L AC+Q+G L +G +H Y + N+ LGT+++DMY+KC
Sbjct: 377 HEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKC 436
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +F++M R+ ++W II +HG A+S F +MI + PD TF +L
Sbjct: 437 GNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVL 496
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA H GLV++GR +F M SKY I P KHY+C+VDLL RAG +EEA +++ SM EP
Sbjct: 497 SACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPD 556
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
VW AL G H +GE+ A K+L+L+P D GI+ L++N + WE+ VRK
Sbjct: 557 AVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKM 616
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
M + G++K PG S +E+NG ++ FI+ DKSH Q E I L +L ++ I
Sbjct: 617 MEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 305/510 (59%), Gaps = 3/510 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y ++ AR++F+ + R + ++N++I Y + E L +++ MI + + PD
Sbjct: 164 LMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPD 223
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C L +L++G + G D+ V +S+L++Y KCG M+EA + F
Sbjct: 224 CATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFY 283
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M ++D+V W++M+NG + NG R A+ + M+ E + + V + ++ ACA L +
Sbjct: 284 EMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKH 343
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG++IR+ L +V V+T+L+DMYAK +++L+ VF S+ W A+ISG
Sbjct: 344 GRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIH 403
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGL+ +EL +M +P+ +L S L A A + L+ +++HGY +R F + +
Sbjct: 404 NGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEV 463
Query: 315 GTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
T +ID+YSKCG A +F+ + + +D+I+W+ IIA YG+HGHGE A+SLF QM+++
Sbjct: 464 ATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS 523
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF S+L A SH+GLV+EG F M+ ++ HY C++DLL RAG +EE
Sbjct: 524 GVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEE 583
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++ +M+ P AVW ALL C H+ +GE AK + +L P + G + L++N ++
Sbjct: 584 AYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSA 643
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W + VR M G++K P +S++EV
Sbjct: 644 VGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 242/441 (54%), Gaps = 6/441 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-PDSSTFTVALKACV 87
ARKLF+EL + ++N++I Y+ ++ LGL+ QM+ R PD+ T+ +KAC
Sbjct: 75 ARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG 134
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ +MG I + V G+ +D FV +S++ +Y+ CG+M A F+ M+ + LV W++
Sbjct: 135 DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNT 194
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MING NG +EA+ + M +GI+ D ++ ++ C+ L + G VH ++
Sbjct: 195 MINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKN 254
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L D+ V SL+DMYAK G++D A +F M + ++V+W +++G+ NG A S L L
Sbjct: 255 LGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQ 314
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
MQ +P+ V+L S L ACA + LK G+ +HG+ +R + + +++ T++IDMY+KC
Sbjct: 315 MMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCN 374
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ + +F + + WN II+ +G +A+ LF QM+ V P+ +T SLL
Sbjct: 375 NVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLP 434
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS-TEPG 445
A + +++ R ++ + E ++D+ ++ G +E A I + + +
Sbjct: 435 AYAFLTDLQQARNMHGYLIRSGFLSRIEVA-TILIDIYSKCGSLESAHNIFNGIPKKDKD 493
Query: 446 LAVWVALLS--GCHNHKKFSI 464
+ W A+++ G H H + +I
Sbjct: 494 IITWSAIIAGYGMHGHGETAI 514
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 204/421 (48%), Gaps = 9/421 (2%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF---VGSSMLNLYVKCGKMNEAMV 132
++ + L+ C S + ++I + LG + + + SS+ Y CG A
Sbjct: 18 TARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARK 77
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLG 191
F++++ L W++MI +G +A+ + +M G D +I+AC D
Sbjct: 78 LFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYL 137
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H ++ + D VQ SL+ MY G +++A VF M +V+W +I+
Sbjct: 138 LPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMIN 197
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDF 310
G+ +NG L + M G EPD ++VS L C+ + L++G+ +H V+
Sbjct: 198 GYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGE 257
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + S++DMY+KCG A+ +F +M RD++SW ++ Y ++G AL L M
Sbjct: 258 DISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQ 317
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
VKP+ T AS+LSA + ++ GR + + K++ ++D+ A+ V
Sbjct: 318 FESVKPNFVTLASVLSACASLYSLKHGRCLHGWAI-RQKLESEVIVETALIDMYAKCNNV 376
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSN 488
+ ++ S + A W A++SGC ++ ++ K++L ++P+D +++L+
Sbjct: 377 NLSFRVFSKXSKQR-TAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435
Query: 489 F 489
+
Sbjct: 436 Y 436
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 305/510 (59%), Gaps = 3/510 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y ++ AR++F+ + R + ++N++I Y + E L +++ MI + + PD
Sbjct: 164 LMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPD 223
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C L +L++G + G D+ V +S+L++Y KCG M+EA + F
Sbjct: 224 CATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFY 283
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M ++D+V W++M+NG + NG R A+ + M+ E + + V + ++ ACA L +
Sbjct: 284 EMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKH 343
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG++IR+ L +V V+T+L+DMYAK +++L+ VF S+ W A+ISG
Sbjct: 344 GRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIH 403
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGL+ +EL +M +P+ +L S L A A + L+ +++HGY +R F + +
Sbjct: 404 NGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEV 463
Query: 315 GTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
T +ID+YSKCG A +F+ + + +D+I+W+ IIA YG+HGHGE A+SLF QM+++
Sbjct: 464 ATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS 523
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF S+L A SH+GLV+EG F M+ ++ HY C++DLL RAG +EE
Sbjct: 524 GVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEE 583
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++ +M+ P AVW ALL C H+ +GE AK + +L P + G + L++N ++
Sbjct: 584 AYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSA 643
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W + VR M G++K P +S++EV
Sbjct: 644 VGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 242/441 (54%), Gaps = 6/441 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-PDSSTFTVALKACV 87
ARKLF+EL + ++N++I Y+ ++ LGL+ QM+ R PD+ T+ +KAC
Sbjct: 75 ARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG 134
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ +MG I + V G+ +D FV +S++ +Y+ CG+M A F+ M+ + LV W++
Sbjct: 135 DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNT 194
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MING NG +EA+ + M +GI+ D ++ ++ C+ L + G VH ++
Sbjct: 195 MINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKN 254
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L D+ V SL+DMYAK G++D A +F M + ++V+W +++G+ NG A S L L
Sbjct: 255 LGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQ 314
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
MQ +P+ V+L S L ACA + LK G+ +HG+ +R + + +++ T++IDMY+KC
Sbjct: 315 MMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCN 374
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ + +F + + WN II+ +G +A+ LF QM+ V P+ +T SLL
Sbjct: 375 NVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLP 434
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS-TEPG 445
A + +++ R ++ + E ++D+ ++ G +E A I + + +
Sbjct: 435 AYAFLTDLQQARNMHGYLIRSGFLSRIEVA-TILIDIYSKCGSLESAHNIFNGIPKKDKD 493
Query: 446 LAVWVALLS--GCHNHKKFSI 464
+ W A+++ G H H + +I
Sbjct: 494 IITWSAIIAGYGMHGHGETAI 514
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+SL YA G A +F + ++ +W A+I + +GL+ L L ++M + G
Sbjct: 60 SSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 276 -PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
PD+ + + AC ++G IH TV FD + + S++ MY CG AR
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+FD M+ R L+SWN +I Y +G +EAL +F MI ++PD +T S+L S+
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+E GR L+ K + + ++D+ A+ G ++EA I M + W ++
Sbjct: 240 LEVGRRVHALVEVK-NLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR-DVVSWTTMM 297
Query: 454 SG 455
+G
Sbjct: 298 NG 299
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 48/229 (20%)
Query: 283 SALLACAQIGFLKLGKSIHGYTVR----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
S L C + K IH +T+ ++ L +S+ Y+ G AR LFD++
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK-PDHSTFA--------------- 382
++ L SWN +I Y G +AL LF+QM+ + + PD+ T+
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
Query: 383 --------------------SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
SL++ + G +E R FDLM + T + M++
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER-----TLVSWNTMIN 197
Query: 423 LLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ G V+EAL + D M EP A V++L C K+ +G +V
Sbjct: 198 GYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 315/535 (58%), Gaps = 2/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A ++F+ + + ++N+++ + + + + + M +PD
Sbjct: 292 LIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPD 351
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + A +L G E+ A++ G +++ +G+S++++Y KC + AFE
Sbjct: 352 QVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFE 411
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KDL+ W+++I G N +A++ ++++ E +D D +++ ++ AC+ L +
Sbjct: 412 YMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKL 471
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGY ++ L D+ +Q ++V++Y + +D A HVF++++ +IV+W ++I+
Sbjct: 472 IKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVH 530
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGLA LEL + EPD ++LVS L A A + LK GK IHG+ +R+ F ++
Sbjct: 531 NGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLI 590
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++DMY++CG AR +F+ ++ RDLI W +I + G+HG G++A+ LF +M + V
Sbjct: 591 ANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENV 650
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH TF +LL A SHSGLV EG+ F++M ++YK++P +HYAC+VDLLAR+ +EEA
Sbjct: 651 LPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAY 710
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
V +M EP VW ALL C H +GE AKK+L+LN ++ G + LVSN FA +
Sbjct: 711 HFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADG 770
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W +V VR M+ + +KK PG S +EV ++H F+ DKSH Q +I L +
Sbjct: 771 RWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQF 825
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 242/443 (54%), Gaps = 6/443 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+IA+Y D+ AR LF+ + D ++NSII A+ + E L L+ +M + V
Sbjct: 189 LIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVE 248
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ TF AL+AC +K+G I ++ + DV+V ++++ +Y CG+M +A
Sbjct: 249 SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M KD V W+++++G+V N +A++ ++ M+ G D+V ++ +I A +
Sbjct: 309 FKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANL 368
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G+ VH Y+I+ ++ ++ + SL+DMY K + F+ M ++++W +I+G+
Sbjct: 369 LAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGY 428
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQN L LL ++Q + D + + S LLAC+ + KL K IHGY ++ +++
Sbjct: 429 AQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADIL 488
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++++Y + + AR +F+ + S+D++SW +I +G EAL LF +IET
Sbjct: 489 IQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETN 548
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEE 432
++PD T S+L A + +++G+ ++ K + ++ + +VD+ AR G +E
Sbjct: 549 IEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMEN 606
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A I + + + L +W ++++
Sbjct: 607 ARNIFNYVK-QRDLILWTSMINA 628
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 5/385 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+ + +YG A K+F+++ R + T+N++I A E + LY +M V
Sbjct: 87 KFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSL 146
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ TF LKAC + + ++G EI AV+ GYG VFV ++++ +Y KCG + A V F
Sbjct: 147 DAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLF 206
Query: 135 EK--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+ M++ D V W+S+I+ V G+ EA+ ++RM++ G++++ + +QAC
Sbjct: 207 DSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTF 266
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G +H ++ + DV V +L+ MYA G ++ A VFK+M + V+W L+SG
Sbjct: 267 IKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSG 326
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
QN + + +MQ G +PD VS+++ + A + L G +H Y ++ D N
Sbjct: 327 MVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSN 386
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +G S+IDMY KC + F+ M +DLISW IIA Y + +AL+L ++
Sbjct: 387 MHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQL 446
Query: 372 TMVKPDHSTFASLLSALSHSGLVEE 396
+ D S+L L+ SGL E
Sbjct: 447 EKMDVDPMMIGSIL--LACSGLKSE 469
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 224/467 (47%), Gaps = 24/467 (5%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P ++ AL+ C S L G+++ ++ Y + VF+ + +++Y KCG +A+
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+KM + + W++MI V G+ EA++ YK M+ G+ D +++AC +
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALI 250
R G +HG +++ V V +L+ MYAK G L A +F + M + + V+W ++I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
S G + L L MQ G E ++ + VSAL AC F+K+G+ IH ++ F
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283
Query: 311 -NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++ + ++I MY+ CG A +F M +D +SWN +++ + +A++ F M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ---PTEKHYA-CMVDLLA 425
++ KPD + ++++A S + G + V Y I+ + H ++D+
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAG-----MEVHAYAIKHGIDSNMHIGNSLIDMYG 398
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG-----CHNHKKFSIGEKVAKKVLKLNPDDL 480
+ V+ + M E L W +++G CH ++ KV + + ++P +
Sbjct: 399 KCCCVKYMGSAFEYMP-EKDLISWTTIIAGYAQNECH-LDALNLLRKVQLEKMDVDPMMI 456
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKV-PGYSVVEVNGEL 526
G L + E+ +E+ G + K G+ + ++V V GEL
Sbjct: 457 GSILLACSGLKSEKLIKEIHGY---VLKGGLADILIQNAIVNVYGEL 500
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 300/540 (55%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + +ARKLF+ LP + ++N II Y + E L+ MI ++PD
Sbjct: 200 LLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPD 259
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L L+ LK +EI + DVF+ S+++++Y KC + A
Sbjct: 260 SITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLC 319
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D V ++MI+G V NG+ +EA++A++ + +E + V + A A L
Sbjct: 320 QSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNL 379
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG I+ L+ V ++++DMYAK G LDLA VF ++ + + W ++I+ +Q
Sbjct: 380 GKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQ 439
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG G + L +M G D VS+ AL ACA + L GK IHG ++ +L
Sbjct: 440 NGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYA 499
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S+IDMY+KCG + +R +FD+MQ ++ +SWN II++YG HG +E L+LF +M+ +
Sbjct: 500 ESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGI 559
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PDH TF ++SA H+G V+EG ++ LM +Y I +HYAC+ D+ RAG + EA
Sbjct: 560 QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAF 619
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++SM P VW LL CH H + E +K + L+P + G + L++N A
Sbjct: 620 ETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAG 679
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +V VR M++ G++KVPGYS +EVN H F+ D SH I VL L LE++
Sbjct: 680 KWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELK 739
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 223/446 (50%), Gaps = 7/446 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + A+ LF L L +N +I ++ L Y +M+ V PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F +KAC L +KMG+ + +G DVFVGSS++ LY + G +++A F+ +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+KD V W+ M+NG V NG A+ + M+ I + V ++ CA G
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+HG ++ L LD V +L+ MY+K L A +F + + ++V+W +ISG+ QNGL
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
G L M S G +PDS++ S L ++ LK K IHGY +R ++ L ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ID+Y KC A+ Q S D + +I+ Y ++G +EAL F +++ +KP
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALK 435
TF+S+ A + + G+ +L S K + EK + + ++D+ A+ G ++ A +
Sbjct: 361 SVTFSSIFPAFAGLAALNLGK---ELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKK 461
+ + + TE W ++++ C + +
Sbjct: 418 VFNRI-TEKDAICWNSMITSCSQNGR 442
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 230/475 (48%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + A+ LF+ +P + +N ++ Y + + ++ +M +++P+
Sbjct: 99 LIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPN 158
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L C S L +G ++ AV G D V +++L +Y KC + A F+
Sbjct: 159 SVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFD 218
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + DLV W+ +I+G V NG EA ++ M GI D + + +L +
Sbjct: 219 TLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH 278
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGY IR + LDV ++++L+D+Y K +++A S + V +ISG+
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVL 338
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG LE + +P SV+ S A A + L LGK +HG ++ + D +
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY+KCG A +F+++ +D I WN +I S +G EA++LF QM
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+ D + + LSA ++ + G+ LM+ K ++ + ++D+ A+ G + +
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSR 517
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
++ D M E W +++S NH + ++L+ + PD + ++S
Sbjct: 518 RVFDRMQ-EKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT L + I+ +Y + A ++F + + +NS+I + S+ P E
Sbjct: 387 IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEA 446
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ QM E R D + + AL AC +L L G+EI ++ +D++ SS++++
Sbjct: 447 INLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDM 506
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +N + F++MQ K+ V W+S+I+ +G +E + + M + GI D V
Sbjct: 507 YAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTF 566
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+G+I AC G G+ + + + + +++ + DM+ + G L A +M
Sbjct: 567 LGIISACGHAGQVDEGIRYY-HLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSM 625
Query: 239 S-RINIVTWGALI 250
+ WG L+
Sbjct: 626 PFPPDAGVWGTLL 638
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 300/540 (55%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + +ARKLF+ P + ++N II Y + E L+ MI ++PD
Sbjct: 200 LLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPD 259
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L L+ LK +EI + DVF+ S+++++Y KC + A
Sbjct: 260 SITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILC 319
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D V ++MI+G V NG+ +EA++A++ + +E + V + A A L
Sbjct: 320 QSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNL 379
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG I+ L+ V ++++DMYAK G LDLA VF ++ + + W ++I+ +Q
Sbjct: 380 GKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQ 439
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG G + L +M G D VS+ AL ACA + L GK IHG ++ +L
Sbjct: 440 NGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYA 499
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S+IDMY+KCG + +R +FD+MQ R+ +SWN II++YG HG +E L+LF +M+ +
Sbjct: 500 ESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGI 559
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PDH TF ++SA H+G V+EG ++ LM +Y I +HYAC+ D+ RAG ++EA
Sbjct: 560 QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAF 619
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++SM P VW LL CH H + E +K + L+P + G + L++N A
Sbjct: 620 ETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAG 679
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +V VR M++ G++KVPGYS +EVN H F+ D SH I VL L LE++
Sbjct: 680 KWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELK 739
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 223/446 (50%), Gaps = 7/446 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + A+ LF L L +N +I ++ L Y +M+ V PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F +KAC L +KMG+ + +G DVFVGSS++ LY + G +++A F+ +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+KD V W+ M+NG V NG A+ + M+ I + V ++ CA G
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+HG ++ L LD V +L+ MY+K L A +F + ++V+W +ISG+ QNGL
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
G L M S G +PDS++ S L ++ LK K IHGY +R ++ L ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ID+Y KC A+ + Q S D + +I+ Y ++G +EAL F +++ +KP
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALK 435
TF+S+ A + + G+ +L S K + EK + + ++D+ A+ G ++ A +
Sbjct: 361 SVTFSSIFPAFAGLAALNLGK---ELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKK 461
+ + + TE W ++++ C + +
Sbjct: 418 VFNRI-TEKDAICWNSMITSCSQNGR 442
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 230/475 (48%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + A+ LF+ +P + +N ++ Y + + ++ +M +++P+
Sbjct: 99 LIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPN 158
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L C S L +G ++ AV G D V +++L +Y KC + A F+
Sbjct: 159 SVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFD 218
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ DLV W+ +I+G V NG EA ++ M GI D + + +L +
Sbjct: 219 TSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH 278
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGY IR + LDV ++++L+D+Y K +++A + S + V +ISG+
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVL 338
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG LE + +P SV+ S A A + L LGK +HG ++ + D +
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY+KCG A +F+++ +D I WN +I S +G EA++LF QM
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+ D + + LSA ++ + G+ LM+ K ++ + ++D+ A+ G + +
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSR 517
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
++ D M E W +++S NH + ++L+ + PD + ++S
Sbjct: 518 RVFDRMQ-ERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 4/253 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT L + I+ +Y + A ++F + + +NS+I + S+ P E
Sbjct: 387 IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEA 446
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ QM E R D + + AL AC +L L G+EI ++ +D++ SS++++
Sbjct: 447 INLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDM 506
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +N + F++MQ ++ V W+S+I+ +G +E + + M + GI D V
Sbjct: 507 YAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTF 566
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+G+I AC G G+ + + + + +++ + DM+ + G LD A +M
Sbjct: 567 LGIISACGHAGQVDEGIRYY-HLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSM 625
Query: 239 S-RINIVTWGALI 250
+ WG L+
Sbjct: 626 PFPPDAGVWGTLL 638
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 306/540 (56%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+A Y + + +ARK+F+ + R +N+++ + E + ++ M+K + D
Sbjct: 147 IVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFD 206
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T L L DL +G I A+++G+ + +V + + LY KCG++ A + F
Sbjct: 207 STTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFG 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + DLV +++MI+G N + +V +K + G + ++GLI G
Sbjct: 267 QIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHL 326
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HG+ + + + V T+L +Y++ ++ A +F S ++ +W A+ISG+AQ
Sbjct: 327 TRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQ 386
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGL + L EMQ C P+ V++ S L ACAQ+G L LGK +H R F+ N+ +
Sbjct: 387 NGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFV 446
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T++IDMY+KCG + A+ LF M ++ ++WN +I+ YG+HG+G EAL+LF +M+ + V
Sbjct: 447 STALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRV 506
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P TF S+L A SH+GLV EG F MV + +P +HYACMVDLL RAG +++AL
Sbjct: 507 SPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKAL 566
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M EPG VW ALL C HK ++ + K+ +L+P ++G + L+SN ++ Q
Sbjct: 567 DFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQ 626
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ E A VR +++ + K PG +++EV LH F D+SH Q I +L+KL +MR
Sbjct: 627 NYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMR 686
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 227/457 (49%), Gaps = 23/457 (5%)
Query: 17 IALYGGKNDIVSARKL----------------FEELPLRGVDTYNSIIIAYSRKESPFEV 60
I L G ND+V+ KL F +P + YN +I A+S SP
Sbjct: 33 IILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSA 92
Query: 61 LGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ LY + K + PD+ T+ + L +G + ++ G+G+D+FVGS+++
Sbjct: 93 VSLYTHLRKSTPLEPDNFTYAFVISG---ASSLGLGLLLHAHSIVAGFGSDLFVGSAIVA 149
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y K ++ A F+ M +D V W++M++GLV N EA+ + M K GI D
Sbjct: 150 CYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTT 209
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ A+L D G+ + +++ + V T L +Y+K G ++ A +F +
Sbjct: 210 VAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIG 269
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ ++V++ A+ISG+ N S++ L E+ G + +S S+V + G L L +
Sbjct: 270 QPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRC 329
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHG+ + N + T++ +YS+ AR LFD+ + L SWN +I+ Y +G
Sbjct: 330 IHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGL 389
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
E+A+SLF +M + V+P+ T S+LSA + G + G++ DL +++ +
Sbjct: 390 TEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDL-INRESFESNIFVST 448
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G + EA ++ SM E W A++SG
Sbjct: 449 ALIDMYAKCGSITEAQRLF-SMMPEKNAVTWNAMISG 484
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K ++ + + LY +I +AR LF ++ + +YN++I Y+ +
Sbjct: 234 MKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSV 293
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +++ + +SS+ + L + I + G ++ V +++ +Y
Sbjct: 294 RLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVY 353
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+ ++ A + F++ K L W++MI+G NG +A+ ++ M+K + + V +
Sbjct: 354 SRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVT 413
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA LG G VH R ++ V T+L+DMYAK G + A +F M
Sbjct: 414 SILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK 473
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N VTW A+ISG+ +G L L EM P V+ +S L AC+ G ++ G I
Sbjct: 474 NAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 294/504 (58%), Gaps = 10/504 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF ++ V +NS+I Y++ +P L LY QM++ PD TF LKAC
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSF 119
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ D G+ + ++ G+ +V+V + +LN+YV+C M + F+K+ + ++V W+ +
Sbjct: 120 IYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCL 179
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH------GY 202
ING V N QPREA++ +K M + G++A+EV M+ + ACA D G VH GY
Sbjct: 180 INGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGY 239
Query: 203 -SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
N +V + T++V+MYAK G L++A +F M NIV W +I+ + Q
Sbjct: 240 DPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNE 299
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVID 320
L L M + GF PD + +S L CA+ L LG+++H Y ++ ++ L T+++D
Sbjct: 300 ALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLD 359
Query: 321 MYSKCGVPSCARALFDQ-MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDH 378
MY+K G A+ +F+ ++ +D++ W +I + IHGHG EALSLF M E + + PDH
Sbjct: 360 MYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDH 419
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
T+ +L A SH GLVEE + F+LM Y I P ++HY+CMVDLL+RAG EA K+++
Sbjct: 420 ITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLME 479
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
+MS P +A+W ALL+GC H+ + +V ++ +L P GI+AL+SN +A KWEE
Sbjct: 480 TMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEE 539
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEV 522
V RK M+ + K G+S VE+
Sbjct: 540 VNRTRKMMKHKRIAKTIGHSSVEM 563
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 175/337 (51%), Gaps = 9/337 (2%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
N A + F ++ ++ ++SMI G + P ++ YK+M + G D +++A
Sbjct: 57 FNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKA 116
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C+ + D G VH ++ +V V T L++MY + +++ VF + + N+V W
Sbjct: 117 CSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAW 176
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH----- 301
LI+G+ N LE+ EM G E + V++V+AL+ACA+ + G+ +H
Sbjct: 177 TCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCK 236
Query: 302 -GYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
GY F + N++L T++++MY+KCG + AR LF++M R++++WN +I +Y +
Sbjct: 237 AGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYER 296
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EAL LF M+ PD +TF S+LS + ++ G ++ + A
Sbjct: 297 YNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATA 356
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ GE+ A KI ++ + + +W ++++
Sbjct: 357 -LLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINA 392
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 189/397 (47%), Gaps = 21/397 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ S K+F+++P V + +I Y + P E L ++ +M + V +
Sbjct: 148 LLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEAN 207
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-------GNDVFVGSSMLNLYVKCGKMN 128
T AL AC D+ G + + + GY ++V + ++++ +Y KCG +N
Sbjct: 208 EVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLN 267
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F KM +++V W+ MIN + EA+ + M G D+ + ++ CA
Sbjct: 268 VARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCA 327
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN-MSRINIVTWG 247
G +VH Y ++ ++ D+ + T+L+DMYAK G L A +F N + + ++V W
Sbjct: 328 RRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWT 387
Query: 248 ALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++I+ A +G L L MQ PD ++ + L AC+ +G ++ + +
Sbjct: 388 SMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTK 447
Query: 307 RFDFNLVLG-----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
+ +L + ++D+ S+ G A L + M R I+ W ++ IH +
Sbjct: 448 SYG---ILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHENIP 504
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSAL-SHSGLVEE 396
A + +++ E ++P S +LLS + ++SG EE
Sbjct: 505 VASQVKVRLAE--LEPIQSGIYALLSNIYANSGKWEE 539
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 45/329 (13%)
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ + A+ +F+ + N+ + ++I G+A++ +L L +M G+ PD + L
Sbjct: 56 YFNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLK 115
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC+ I GK +H ++ F+ N+ + T +++MY +C +FD++ ++++
Sbjct: 116 ACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVA 175
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY------ 399
W +I Y I+ EAL +F +M V+ + T + L A + V+ GR+
Sbjct: 176 WTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVC 235
Query: 400 -----------------------------WFDLMVSKYKIQPTEKHYA--CMVDLLARAG 428
W ++ + P A CM++ +
Sbjct: 236 KAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYE 295
Query: 429 EVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN-PDDLGIHA 484
EAL + M P A ++++LS C ++GE V +LK N D+ A
Sbjct: 296 RYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDI---A 352
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
L + M K E+ +K S KK
Sbjct: 353 LATALLDMYAKNGELGSAQKIFNNSLEKK 381
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 322/561 (57%), Gaps = 5/561 (0%)
Query: 1 MIKTNLSAYGNSVGRIIA--LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M+ T + S+ ++IA L G + A +F + V T+NS++ A+ P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60
Query: 59 EVLGLYNQMIKEDVR-PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L Y +M++ PD TF LK C L++ K+G+ + + V+ +D+++ +++
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
LN+Y CG + A FE+M ++ V W+SMI+G + N P EA+ YK+M+++G DE
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V M L+ ACA+L D G+ +H + + + + ++LV+MYAK G L A VF
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKL 296
+S ++ W ALI G+ +N + L+L E+ P+ V++++ + ACAQ+G L+
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ +H Y R + ++ L S+IDM+SKCG A+ +FD M +DLISWN ++ +
Sbjct: 301 GRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLAL 360
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HG G EAL+ F M T ++PD TF +L+A SH+GLV+EG+ F + + Y ++ +
Sbjct: 361 HGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE 420
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVDLL RAG + EA + + M +P A+W ++L C + +GE+ A+ +L+L
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLEL 480
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
P + G++ L+SN +A + W EV VR+ M + G++K PG S V ++ H+F+ D S
Sbjct: 481 EPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCS 540
Query: 536 HNQYEDIVYVLKKLYLEMRAI 556
H + +I +L+++ +++ +
Sbjct: 541 HPEIAEISIMLRQVREKLKLV 561
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 299/537 (55%), Gaps = 34/537 (6%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L LY +++ RPD TF LKAC L + G + + LG+ DVFV ++ ++
Sbjct: 106 LPLYCSLLRS-ARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHF 164
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVV 179
C M EA F+ +DLV W+++I G V G PREA++ + RM +G + DEV
Sbjct: 165 LAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVT 224
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
M+G++ A L D G +HGY + V++ ++DMY K G L+ A VF+ +
Sbjct: 225 MIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGID 284
Query: 240 RINIVTWGALISGFAQNGL-------------------------------AGSTLELLME 268
+ IV+W +I G+AQ GL L L +
Sbjct: 285 KKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHD 344
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGV 327
MQ EPD +++V+ L AC+Q+G L++G +H Y RR +++LGT+++DMYSKCG
Sbjct: 345 MQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGN 404
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F ++ ++ ++W +I+ HGH + A+ F +MIE ++PD TF +LSA
Sbjct: 405 IEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSA 464
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
H+GLV+EG+ +F LMVSKY ++ KHY+CMVDLL RAG ++EA +V++M EP
Sbjct: 465 CCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAV 524
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW AL C H ++GEK A K+++L+P D GI+ L++N +A ++ VR MR
Sbjct: 525 VWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMR 584
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHM 564
G++KVPG S +E+NG +H FI++DKSH I L ++ L++ ++ + M
Sbjct: 585 HLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEHTANMIDTSM 641
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 38/377 (10%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVA 82
+ + ARKLF+ +R + ++N++I Y R+ P E L ++ +M+ + V PD T
Sbjct: 169 SSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGV 228
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+ L DL++G + G V + + ++++Y+KCG + A FE + +K +
Sbjct: 229 VSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTI 288
Query: 143 VCWSSMINGL-----------VFNGQP--------------------REAVDAYKRMKKE 171
V W++MI G VF+ P +EA+ + M++
Sbjct: 289 VSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA 348
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
++ D++ M+ L+ AC+ LG G+ VH Y RR ++L V + T+LVDMY+K G+++ A
Sbjct: 349 MVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKA 408
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VFK + N +TW A+ISG A +G A ++ M G +PD ++ + L AC
Sbjct: 409 IRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHA 468
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNV 348
G +K G+ V ++ + + ++D+ + G A L + M D + W
Sbjct: 469 GLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGA 528
Query: 349 IIASYGIHGH---GEEA 362
+ + +HG+ GE+A
Sbjct: 529 LFFACRMHGNITLGEKA 545
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I A ++F+E+P + T+ ++I + + + +MI+ ++PD
Sbjct: 395 LVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPD 454
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TF L AC +K G+E + V + + S M++L + G ++EA
Sbjct: 455 EITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLV 514
Query: 135 EKMQ-RKDLVCWSSMINGLVFNGQ 157
M D V W ++ +G
Sbjct: 515 NTMPMEPDAVVWGALFFACRMHGN 538
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 299/530 (56%), Gaps = 4/530 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VRPDSSTFTVALKAC 86
AR++F+ +P R +N+++ Y+R P + +M E+ RPDS T L AC
Sbjct: 70 ARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L E+ A+ G V V +++L+ Y KCG + A F+ M ++ V W+
Sbjct: 130 ADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G NG EA+ + RM +EG+D + ++ +QAC +LG VH +R
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGFAQNGLAGSTLEL 265
L+ +V V +L+ YAK DLA+ VF + ++ ++W A+I GF QN L
Sbjct: 250 GLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERL 309
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
MQ PDS +LVS + A A I + IHGY++R + D ++ + T++IDMYSK
Sbjct: 310 FARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSK 369
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG S AR LFD + R +I+WN +I YG HG G+ A+ LF +M T P+ +TF S+
Sbjct: 370 CGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSV 429
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+A SH+GLV+EG+ +F M Y ++P +HY MVDLL RAG+++EA + +M EP
Sbjct: 430 LAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEP 489
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
G++V+ A+L C HK + E+ A+ + +L P++ H L++N +A W++VA VR
Sbjct: 490 GISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRT 549
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
M K G++K PG+S++++ E+H F +H +DI L KL E++
Sbjct: 550 AMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIK 599
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 196/390 (50%), Gaps = 6/390 (1%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P TFT LK C + DL G + + G ++ +++ N+Y KC + +A
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACADLG 191
F++M +D V W++++ G NG P A++A RM+ E G D V ++ ++ ACAD
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
VH +++R L+ V V T+++D Y K G ++ A VF M N V+W A+I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G+A NG A + L M G + S+++AL AC ++G+L + +H VR
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL-ISWNVIIASYGIHGHGEEALSLFLQM 369
N+ + ++I Y+KC A +F+++ ++ ISWN +I + + E+A LF +M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
V+PD T S++ A++ + R W ++++ ++D+ ++ G
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQAR-WIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
V A ++ DS + + + W A++ G +H
Sbjct: 373 VSIARRLFDS-ARDRHVITWNAMIHGYGSH 401
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 170/330 (51%), Gaps = 7/330 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
++ L N ++ Y + +AR +F+ +P+R ++N++I Y+ + E +
Sbjct: 146 LRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAM 205
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M++E V ++ AL+AC L L + V +G ++V V ++++ Y
Sbjct: 206 ALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTY 265
Query: 122 VKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
KC + + A F ++ +K + W++MI G N P +A + RM+ E + D +
Sbjct: 266 AKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTL 325
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ +I A AD+ D +HGYSIR L+ DV V T+L+DMY+K G + +A +F +
Sbjct: 326 VSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARD 385
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++TW A+I G+ +G + +EL EM+ G P+ + +S L AC+ G + G+
Sbjct: 386 RHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKY 445
Query: 301 HGYTVRRFDFNLVLGT----SVIDMYSKCG 326
+ + D+ L G +++D+ + G
Sbjct: 446 --FASMKKDYGLEPGMEHYGTMVDLLGRAG 473
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 323/594 (54%), Gaps = 44/594 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELP-----LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
II+ Y A K F E+ V ++ ++I + FE L ++ +M+ E
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNE 129
V+P+S T A+ AC +L L+ G EI +++ +D+ VG+S+++ Y KC +
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ---- 185
A F +++ DLV W++M+ G G EA++ MK +GI+ D + GL+
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 186 -------------------------------ACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
AC + + + G +HGY +R H+ L V
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
++L+ MY+ L++A VF +S ++V W ++IS AQ+G + + L+LL EM
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARA 333
E ++V++VSAL AC+++ L+ GK IH + +R D + S+IDMY +CG +R
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSG 392
+FD M RDL+SWNV+I+ YG+HG G +A++LF Q TM +KP+H TF +LLSA SHSG
Sbjct: 657 IFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF-QXFRTMGLKPNHITFTNLLSACSHSG 715
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
L+EEG +F +M ++Y + P + YACMVDLL+RAG+ E L+ ++ M EP AVW +L
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSL 775
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L C H + E A+ + +L P G + L++N ++ +WE+ A +R M++ G+
Sbjct: 776 LGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVT 835
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEE 566
K PG S +EV +LH+F++ D SH E I KL ++ L GH E+
Sbjct: 836 KPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKLDVDEDEKEFSLCGHSEK 889
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 42/385 (10%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R++ +Y + AR++F+++ R V ++ +I+ Y E + L+ M+ E VRP
Sbjct: 129 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 188
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D F KAC L + ++G++++ + +G+ + V S+L++++KCG+M+ A F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+++ KD+ W+ M++G G+ ++A+ MK G+ D+V +I
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-------- 300
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-----RINIVTWGAL 249
YA++G + AS F M + N+V+W AL
Sbjct: 301 ---------------------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--R 307
I+G QNG L + +M G +P+S+++ SA+ AC + L+ G+ IHGY ++
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
D +L++G S++D Y+KC AR F ++ DL+SWN ++A Y + G EEA+ L
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 368 QMIETMVKPDHSTFASLLSALSHSG 392
+M ++PD T+ L++ + G
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYG 478
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 163/346 (47%), Gaps = 10/346 (2%)
Query: 174 DADEVVMM--GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
+ DE + + ++Q C L + R G VH + +++ + + L+++Y +TG ++ A
Sbjct: 84 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
+F MS N+ +W A++ + G T++L M + G PD AC+++
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
Query: 292 GFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
++GK ++ Y + F+ N + S++DM+ KCG AR F++++ +D+ WN+++
Sbjct: 204 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 263
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ Y G ++AL M + VKPD T+ +++S + SG EE +F M
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF 323
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEK 467
+P + ++ + G EAL + M E P + +S C N G +
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
+ +K+ ++L LV N ++ + + V RK GM K
Sbjct: 384 IHGYCIKV--EELDSDLLVGN--SLVDYYAKCRSVEVARRKFGMIK 425
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L + +I +YG I +R++F+ +P R + ++N +I Y +
Sbjct: 626 IIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDA 685
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
+ L+ ++P+ TFT L AC + EE W+ K ++ Y D V +
Sbjct: 686 VNLFQXFRTMGLKPNHITFTNLLSACS---HSGLIEEGWKYFKMMKTEYAMDPAVEQYAC 742
Query: 117 MLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQP 158
M++L + G+ NE + EKM + W S++ + P
Sbjct: 743 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP 785
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 311/559 (55%), Gaps = 36/559 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F +P N + SR E P + L +Y +M + + D +F LKA
Sbjct: 75 ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSR 134
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L G EI A +LG+ +D FV + ++ +Y CG++ EA + F+KM +D+V WS M
Sbjct: 135 VKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIM 194
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G +G +A+ ++ MK ++ DE+++ ++ AC G+ +G +H + + ++
Sbjct: 195 IDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNI 254
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT----------------------- 245
+D +Q++LV MYA G +DLA ++F+ M+ N+V
Sbjct: 255 VVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQ 314
Query: 246 --------WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
W A+ISG+A++ L L EMQS G +PD V+++S + ACA +G L
Sbjct: 315 MVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA 374
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K IH + + F L + ++I+MY+KCG AR +FD+M +++ISW +I+++ +H
Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMH 434
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G AL F QM + ++P+ TF +L A SH+GLVEEGR F M++++ I P H
Sbjct: 435 GDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVH 494
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y CMVDL RA + EAL++V++M P + +W +L++ C H + +GE AK++L+L+
Sbjct: 495 YGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELD 554
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
PD G H +SN +A ++WE+V VRK M+ G+ K G S E+N E+H F++ D+SH
Sbjct: 555 PDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSH 614
Query: 537 NQ----YEDIVYVLKKLYL 551
YE + V+ KL L
Sbjct: 615 KHADEIYEKLYEVVSKLKL 633
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 198/430 (46%), Gaps = 57/430 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I AR +F+++ R V T++ +I Y + + L L+ +M +V PD
Sbjct: 163 LVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPD 222
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC +L G+ I +E D + S+++ +Y CG M+ A+ FE
Sbjct: 223 EMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFE 282
Query: 136 KMQ-------------------------------RKDLVCWSSMINGLVFNGQPREAVDA 164
KM +KDLVCWS+MI+G + P+EA++
Sbjct: 283 KMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNL 342
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ M+ GI D+V M+ +I ACA LG +H + + + + +L++MYAK
Sbjct: 343 FNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAK 402
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G L+ A +F M R N+++W +IS FA +G AGS L +M+ EP+ ++ V
Sbjct: 403 CGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGV 462
Query: 285 LLACAQIGFLKLGKSI-------HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
L AC+ G ++ G+ I H T + + ++D++ + + A L +
Sbjct: 463 LYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG-----CMVDLFGRANLLREALELVEA 517
Query: 338 MQ-SRDLISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
M + ++I W ++A+ +HG GE A L++ PDH L S +
Sbjct: 518 MPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLEL-----DPDHDGAHVFL-----SNI 567
Query: 394 VEEGRYWFDL 403
+ R W D+
Sbjct: 568 YAKARRWEDV 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 172/361 (47%), Gaps = 34/361 (9%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++ A+ F + + + + + L + +P + + Y+RM+ +G+ D L++A
Sbjct: 72 LDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKA 131
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+ + GL +HG + + + D VQT LV MYA G + A +F M ++VTW
Sbjct: 132 LSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTW 191
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+I G+ Q+GL L L EM++ EPD + L + L AC + G L GK IH + +
Sbjct: 192 SIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIME 251
Query: 307 R---------------------FDF-----------NLVLGTSVIDMYSKCGVPSCARAL 334
D NLV T+++ YSK G AR++
Sbjct: 252 NNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSV 311
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F+QM +DL+ W+ +I+ Y +EAL+LF +M +KPD T S+++A +H G +
Sbjct: 312 FNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL 371
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++ + W L V K ++++ A+ G +E A +I D M + ++ W ++S
Sbjct: 372 DQAK-WIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVIS-WTCMIS 429
Query: 455 G 455
Sbjct: 430 A 430
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 296/508 (58%), Gaps = 5/508 (0%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ P++ TF A+K+C +L G+++ + G + FV +S++++Y KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 127 MNEAMVAFEK--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
++ A F++ RK VC++S+++G N + ++ V + M++ G++ + V M+GL+
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
Q C G+ G+ VHG+ ++ L++D V L+ MY K+G +D +F M R ++
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
TW A+I+G+AQNGLA + LEL EM+S GF PD ++LV L +CA +G L +GK +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVE-RK 239
Query: 305 VRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ F F N L ++++MY++CG AR +FD M + ++SW II YG+HG GE A
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVA 299
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
+ LF +MI +KPD + F S+LSA SH+GL +G +F +M KY ++P +HY+CMVD
Sbjct: 300 VGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVD 359
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
LL RAG + EA ++++SM A+W ALL C H+ + E ++V++L P + G
Sbjct: 360 LLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGY 419
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ L+SN + E + VR MRK +KK PG S VE G +H F D++H Q +I
Sbjct: 420 YVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEI 479
Query: 543 VYVLKKLYLEMRAISSWLQGHMEEHEEH 570
L +L ++ + + E EE+
Sbjct: 480 YKKLNELENLVKDLDGCKKNDHERREEY 507
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 204/409 (49%), Gaps = 23/409 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++YG + I +ARKLF+E P T YNS++ Y+ +V+ L+ +M + V
Sbjct: 51 LISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVE 110
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ T ++ C +L +G + V+ G D VG+ +L +YVK G+++
Sbjct: 111 INGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKL 170
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M RK L+ W++MING NG ++ YK M+ +G D + ++G++ +CA LG
Sbjct: 171 FDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGAL 230
Query: 194 RFGLSVH------GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
G V G+S LN +LV+MYA+ G+L A +F M ++V+W
Sbjct: 231 SVGKEVERKMEGFGFSSNPFLN------NALVNMYARCGNLKKARDIFDGMPVKSVVSWT 284
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+I G+ +G + L EM G +PD + VS L AC+ G G G R+
Sbjct: 285 AIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERK 344
Query: 308 FDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
+ L G + ++D+ + G + AR L + MQ R D W ++ + IH + E A
Sbjct: 345 --YGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELA 402
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
F Q+IE ++P ++ + LLS + EG +++ K K++
Sbjct: 403 ELAFEQVIE--LEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLK 449
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 131/243 (53%), Gaps = 3/243 (1%)
Query: 11 NSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
+SVG ++ +Y +I RKLF+E+P +G+ T+N++I Y++ VL LY +M
Sbjct: 148 SSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMES 207
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ PD T L +C L L +G+E+ RK G+ ++ F+ ++++N+Y +CG + +
Sbjct: 208 KGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKK 267
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M K +V W+++I G +GQ AV + M + GI D + ++ AC+
Sbjct: 268 ARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSH 327
Query: 190 LGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
G + GL G R++ L + + +VD+ + G L+ A + ++M R + WG
Sbjct: 328 AGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWG 387
Query: 248 ALI 250
AL+
Sbjct: 388 ALL 390
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 306/545 (56%), Gaps = 3/545 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ A+ + +I++Y N I+ A +F + R + ++ S+I +S+ E
Sbjct: 190 VLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249
Query: 61 LGLYNQMIKEDVR-PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L + +M+ + V P+ F AC SL+ + G ++ +++ G G DVF G S+ +
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCD 309
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG ++ A V F ++ R DLV W+++I G + G +EA+ + +M+ +G+ DE+
Sbjct: 310 MYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEIT 369
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM- 238
+ L+ AC + G+ VHGY + L+LDV V +L+ MYAK L A F+ M
Sbjct: 370 VRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMR 429
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++V+W A+++ ++ A LL M PD ++L + L A A+ +++G
Sbjct: 430 CNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGN 489
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y ++ + + + +ID+Y+KCG A +FD M + D++SW+ +I Y G
Sbjct: 490 QVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFG 549
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+GEEAL LF M VKP+H TF +L+A SH GLVEEG + M ++ I PT +H
Sbjct: 550 YGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHC 609
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+CMVDLLARAG + EA + M+ +P + VW LL+ C H +G++ A+ +LK++P
Sbjct: 610 SCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDP 669
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ H L+ N +A + WE+VA +R M++ G++KVPG S +EV +H F +ED H
Sbjct: 670 SNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHP 729
Query: 538 QYEDI 542
+ I
Sbjct: 730 ERNKI 734
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 246/493 (49%), Gaps = 16/493 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +YG + A+K+F+ +P R V ++ S+I YS+ L Y QM++ V PD
Sbjct: 104 ILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPD 163
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +KAC SL D+ +G ++ ++ +G + ++++++Y K + +A+ F
Sbjct: 164 QFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFS 223
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSR 194
+M +DL+ W SMI G G EA+ +K M +G+ +E + + AC+ L
Sbjct: 224 RMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +HG SI+ L DV SL DMYAK G L A VF + R ++V W A+I+GFA
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFA 343
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
G A + +M+ G PD +++ S L AC L G +HGY + D ++
Sbjct: 344 YGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVP 403
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +++ MY+KC A F++M+ DL+SWN I+ + H EE L M +
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCIS 463
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+PD+ T ++L A + + +E G K + ++DL A+ G ++
Sbjct: 464 QHRPDYITLTNVLGASAETVSIEIGNQ-VHCYALKTGLNCDTSVTNGLIDLYAKCGSLKT 522
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK-----KVLKLNPDD---LGIHA 484
A KI DSM P + W +L+ G + +F GE+ K + L + P+ +G+
Sbjct: 523 AHKIFDSM-INPDVVSWSSLILG---YAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLT 578
Query: 485 LVSNFFAMEQKWE 497
S+ +E+ W+
Sbjct: 579 ACSHVGLVEEGWK 591
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 199/387 (51%), Gaps = 3/387 (0%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
ST+ + AC L L+ G++I ++ D+ + + +LN+Y KC + +A F+
Sbjct: 64 STYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDA 123
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M +++V W+S+I G NGQ A++ Y +M + G+ D+ +I+AC+ LGD G
Sbjct: 124 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 183
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+H + ++ + Q +L+ MY K+ + A VF M+ ++++WG++I+GF+Q
Sbjct: 184 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 243
Query: 257 GLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G L EM G + P+ S AC+ + + G+ +HG +++ ++
Sbjct: 244 GYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFA 303
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G S+ DMY+KCG+ SCAR +F Q+ DL++WN IIA + G +EA++ F QM +
Sbjct: 304 GCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGL 363
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T SLL A + + +G ++K + ++ + A+ E+ +A+
Sbjct: 364 IPDEITVRSLLCACTSPSELYQGMQVHG-YINKMGLDLDVPVCNTLLTMYAKCSELRDAI 422
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ M L W A+L+ C H +
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMRHDQ 449
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 315/591 (53%), Gaps = 35/591 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGK--NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
MI T L + G ++ R++A ++ K+ ++N I Y E+P
Sbjct: 77 MISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPI 136
Query: 59 EVLGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ LY M+++ PD+ T+ + K C EI ++LG+ +D+FV +++
Sbjct: 137 NAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAI 196
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++ V CG++ A F++ +DLV W+S+ING V G EA D Y +M + + DE
Sbjct: 197 IHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDE 256
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V M+G++ A A L + G +H LNL V + +L+DMY K +++ A +F+N
Sbjct: 257 VTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFEN 316
Query: 238 MSRINIVTW-------------------------------GALISGFAQNGLAGSTLELL 266
M++ +V+W ALI GF Q + L L
Sbjct: 317 MTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALF 376
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EMQ+ PD +++V+ L AC+Q+G L +G +H Y + N+ LGT+++DMY+KC
Sbjct: 377 HEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKC 436
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +F++M R+ ++W II +HG A+S F +MI + PD TF +L
Sbjct: 437 GNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVL 496
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA H GLV++GR +F M SKY I P KHY+C+VDLL RAG +EEA +++ SM EP
Sbjct: 497 SACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPD 556
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
VW AL G H +GE+ A K+L+L+P D GI+ L++N + WE+ VRK
Sbjct: 557 AVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKM 616
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
M + G++K PG S +E+NG ++ FI+ DKSH Q E I L +L ++ I
Sbjct: 617 MEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 314/539 (58%), Gaps = 10/539 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG D+ SA +LFE +P R + +I Y++ E L ++ +M + + P+
Sbjct: 242 LIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPN 301
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV-FVGSSMLNLYVKCGKMNEAMVAF 134
T L AC L +K G + + ++ F+G +++ LY G + + F
Sbjct: 302 QVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVF 361
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E ++ K ++ W+++I+ NGQP EA+ + +M+ +G+ D + + AC + S+
Sbjct: 362 ETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQ 421
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY I+ N + VQ +L+DMYAK G + A+ +F+ + ++VTW ++I GF+
Sbjct: 422 LGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFS 480
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG----YTVRRFDF 310
QNG + + L +M + D ++ +S + AC+ +G+L+ GK +H Y +R+ +
Sbjct: 481 QNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY 540
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
L T++ DMYSKCG A +FD+M R ++SW+V+IA YG+HG +SLF QM+
Sbjct: 541 ---LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQML 597
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +KP+ TF +LSA SH+G VEEG+ +F+ M S++ ++P H+ACMVDLL+RAG++
Sbjct: 598 GSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDL 656
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
A +I+ S+ ++W ALL+GC HK+ I + + K +L ++ D G + L+SN +
Sbjct: 657 NGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIY 716
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A E W++ VR M+ G++KVPGYS +E++ +++ F D SH+Q +DI L+
Sbjct: 717 AEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENF 775
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 266/475 (56%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + + A K F+ +P+R V ++SI++ + + E L +++QMI E V PD
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPD 200
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T +AC L L++G + V ++ + +S++ +Y K G + A FE
Sbjct: 201 SVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFE 260
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + W+ MI+ +G +EA++ + +M++ ++ ++V M+G++ ACA LG +
Sbjct: 261 NVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKE 320
Query: 196 GLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHG+ IRR ++ ++ + +L+++YA TG+L VF+ + I++W LIS F
Sbjct: 321 GRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFT 380
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+NG L L ++MQ+ G PDS SL S+L AC I F +LG IHGY ++ +FN +
Sbjct: 381 RNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV 440
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY+KCG A +F++++ + L++WN +I + +G+ EA++LF QM V
Sbjct: 441 QNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCV 500
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K D TF S++ A SH G +E+G+ W + Y ++ + D+ ++ GE++ A
Sbjct: 501 KMDKLTFLSVIQACSHLGYLEKGK-WVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAH 559
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
+ D MS E + W +++G H + + + ++L + P+D+ ++S
Sbjct: 560 GVFDRMS-ERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILS 613
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 240/469 (51%), Gaps = 34/469 (7%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
T L + + ++I Y S++++F+ P + +I Y E + L
Sbjct: 27 TGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSL 86
Query: 64 YNQMIKEDVRPDSS-TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
Y++M+ +D S+ F LKAC DL +G ++ + ++ G+ +D V +S+L +Y
Sbjct: 87 YHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYG 146
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ +++A AF+ M +D+V WSS++ V NGQ E +D + +M E ++ D V M+
Sbjct: 147 EMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLS 206
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+ +AC++LG R G SVHGY +RR + + + SL+ MY K G L A +F+N+
Sbjct: 207 VTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRM 266
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W +IS + Q+G L + +MQ EP+ V++V L ACA++G +K G+S+HG
Sbjct: 267 TAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHG 326
Query: 303 YTVRR-----FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+ +RR DF LG +++++Y+ G +F+ ++ + ++SWN +I+ + +G
Sbjct: 327 FVIRRAMDPELDF---LGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNG 383
Query: 358 HGEEALSLFLQMIETMVKPDHSTFA-----------SLLSALSHSGLVEEGRYWFDLMVS 406
EEAL LF+QM + PD + A S L A H +++ G F+ V
Sbjct: 384 QPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN--FNDFVQ 441
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G V A K+ + + E L W +++ G
Sbjct: 442 N-----------ALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMICG 478
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 14/287 (4%)
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ M L + CA S +H + L+ T L++ YA+ G + + VF
Sbjct: 2 ILYMPLFRRCAT---STTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDT 58
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEM----QSCGFEPDSVSLVSALLACAQIGF 293
+ + WG LI + G + L EM Q+ + + S L AC+ G
Sbjct: 59 FPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQT---QISNFVFPSVLKACSGFGD 115
Query: 294 LKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L +G +HG ++ F+ + V+ TS++ MY + A FD M RD+++W+ I+ +
Sbjct: 116 LSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLN 175
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+ +G E L +F QMI V+PD T S+ A S G + GR +V + +I+
Sbjct: 176 FVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRR-EIES 234
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++ + + G++ A ++ +++ A W ++S C+N
Sbjct: 235 NASLNNSLIVMYGKLGDLYSAERLFENVPCRM-TAPWTPMIS-CYNQ 279
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 310/554 (55%), Gaps = 1/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++++ + + G+ ++ +Y ++ A+ +FE R V ++NS+I +++ S
Sbjct: 457 ILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ +M E++ PD+ TF L C + L++G++I + E G DV +G++++N+
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y++CG + +A F +Q +D++ W++MI G G+ +A++ + +M+ EG +
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTF 636
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++ C G V Y + LD V +L+ Y+K+G + A VF M
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS 696
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV+W +I+G+AQNGL + +E +MQ P+ S VS L AC+ L+ GK +
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRV 756
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H V+R ++ +G ++I MY+KCG A+ +FD + +++++WN +I +Y HG
Sbjct: 757 HAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLA 816
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+AL F M + +KPD STF S+LSA +H+GLV EG F M S+Y + PT +HY C
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGC 876
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+V LL RA +EA +++ M P AVW LL C H ++ E A LKLN +
Sbjct: 877 LVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARN 936
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
++ L+SN +A +W++VA +R+ M G++K PG S +EV+ +H FI D+SH +
Sbjct: 937 PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPET 996
Query: 540 EDIVYVLKKLYLEM 553
+I LK+L +EM
Sbjct: 997 AEIYAELKRLSVEM 1010
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 245/465 (52%), Gaps = 8/465 (1%)
Query: 1 MIKTNLSAYGNS----VGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKE 55
+I +++S G+S +G +I++Y D+ AR+LF +P R + ++N+II Y+R+E
Sbjct: 351 LIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRE 410
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGS 115
E + LY QM E V+P TF L AC + G+ I + G ++ + +
Sbjct: 411 DRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLAN 470
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
+++N+Y +CG + EA FE Q +D++ W+SMI G +G A ++ M+ E ++
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
D + ++ C + G +HG L LDV + +L++MY + G L A +VF
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
++ ++++W A+I G A G +EL +MQ+ GF P + S L C L
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLD 650
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
GK + Y + ++ + +G ++I YSK G + AR +FD+M SRD++SWN IIA Y
Sbjct: 651 EGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYA 710
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+G G+ A+ QM E V P+ +F SLL+A S +EEG+ +V K K+Q
Sbjct: 711 QNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIV-KRKLQGDV 769
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ A ++ + A+ G EA ++ D++ E + W A+++ H
Sbjct: 770 RVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQH 813
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 238/442 (53%), Gaps = 3/442 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++YG D+ AR++F + R V +YN+++ Y++K E LGL+ QM E + PD
Sbjct: 169 LLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPD 228
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L A + L G+ I + VE G +D+ VG++++ + V+CG ++ A AF+
Sbjct: 229 KVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFK 288
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+D+V ++++I L +G EA + Y RM+ +G+ + + ++ AC+
Sbjct: 289 GTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEA 348
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + + DV++ +L+ MYA+ G L A +F M + ++++W A+I+G+A+
Sbjct: 349 GKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYAR 408
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + L +MQS G +P V+ + L ACA GK IH +R N L
Sbjct: 409 REDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHL 468
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++MY +CG A+ +F+ Q+RD+ISWN +IA + HG E A LF +M +
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD+ TFAS+LS + +E G+ +++ +Q ++++ R G +++A
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIRCGSLQDAR 587
Query: 435 KIVDSMSTEPGLAVWVALLSGC 456
+ S+ ++ W A++ GC
Sbjct: 588 NVFHSLQHRDVMS-WTAMIGGC 608
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 243/477 (50%), Gaps = 9/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ A ++F+E+P R V ++NS+I Y+++ + L+ +M P+
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPN 127
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L AC S +L+ G++I + ++ GY D V +S+L++Y KCG + A F
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA 187
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+V +++M+ +E + + +M EGI D+V + L+ A
Sbjct: 188 GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ LN D++V T+LV M + G +D A FK + ++V + ALI+ AQ
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQ 307
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G E M+S G + + +S L AC+ L+ GK IH + ++ +
Sbjct: 308 HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI 367
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I MY++CG AR LF M RDLISWN IIA Y EA+ L+ QM V
Sbjct: 368 GNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGV 427
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQPTEKHYA-CMVDLLARAGEVEE 432
KP TF LLSA ++S +G+ D++ S K + H A ++++ R G + E
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK---SNGHLANALMNMYRRCGSLME 484
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
A + + ++ W ++++G H + K+ +++ +L PD++ +++S
Sbjct: 485 AQNVFEGTQARDVIS-WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 211/449 (46%), Gaps = 43/449 (9%)
Query: 69 KEDV------RP---DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+EDV RP + +T+ L+ C L + I + VE G D+F+ + ++N
Sbjct: 11 REDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLIN 70
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+YVKC + +A F++M R+D++ W+S+I+ G ++A ++ M+ G +++
Sbjct: 71 MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKIT 130
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ AC + G +H I+ D +VQ SL+ MY K G L A VF +S
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V++ ++ +AQ L L +M S G PD V+ ++ L A L GK
Sbjct: 191 PRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH TV + ++ +GT+++ M +CG A+ F RD++ +N +IA+ HGH
Sbjct: 251 IHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGH 310
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKY 408
EA + +M V + +T+ S+L+A S S +E G+ + D+ +
Sbjct: 311 NVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNA 370
Query: 409 KIQ--------PTEKH------------YACMVDLLARAGEVEEALKIVDSMSTE---PG 445
I P + + ++ AR + EA+++ M +E PG
Sbjct: 371 LISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPG 430
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
++ LLS C N ++ G+ + + +L+
Sbjct: 431 RVTFLHLLSACANSSAYADGKMIHEDILR 459
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 295/512 (57%), Gaps = 5/512 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + AR +F+ + R V ++N++I Y R + L +++ M+ E V PD
Sbjct: 158 LLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPD 217
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C L L+MG + + E G+ + V ++++N+Y+KCG+M+EA F
Sbjct: 218 HATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFG 277
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+R+D++ W+ MING + +G A++ + M+ EG+ + V + L+ AC D
Sbjct: 278 RMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLND 337
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG++IR+ + D+ ++TSL+ MYAK H+DL VF SR + W A+I+G Q
Sbjct: 338 GKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQ 397
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L L+L M+ EP+ +L S L A A + L+ +IH Y + F +L
Sbjct: 398 NELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDA 457
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQ----SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
T ++ +YSKCG A +F+ +Q S+D++ W +I+ YG+HG G AL +F++M+
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V P+ TF S L+A SHSGLVEEG F M+ YK HY C+VDLL RAG +
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++ ++ EP +W ALL+ C H+ +GE A K+ +L P++ G + L++N +
Sbjct: 578 DEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
A +W+++ VR M G++K PG+S +E+
Sbjct: 638 AALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 225/437 (51%), Gaps = 9/437 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR--PDSSTFTVAL 83
I ARKLF+E+P + +YN +I Y R + + ++ +M+ E ++ PD T+
Sbjct: 65 IAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVA 124
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KA L + +G I + + +G D +V +++L +Y+ G++ A F+ M+ +D++
Sbjct: 125 KAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVI 184
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W++MI+G NG +A+ + M EG+D D ++ ++ C L G +VH
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLV 244
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ L ++V+ +LV+MY K G +D A VF M R +++TW +I+G+ ++G + L
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENAL 304
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
EL MQ G P++V++ S + AC L GK +HG+ +R + ++++ TS+I MY
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMY 364
Query: 323 SKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
+KC + C R +F W+ IIA + +AL LF +M V+P+ +T
Sbjct: 365 AKCKHIDLCFR-VFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATL 423
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
SLL A + + + ++K + +V + ++ G +E A KI + +
Sbjct: 424 NSLLPAYATLADLRQTMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 442 TE---PGLAVWVALLSG 455
+ + +W AL+SG
Sbjct: 483 EKHKSKDVVLWGALISG 499
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 311/544 (57%), Gaps = 3/544 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y D+VSAR LF+++P R ++N++I Y + E L L+ +M + +
Sbjct: 173 VNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSI 232
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T T + AC L D ++G ++ V Y ++ V +S++ +Y+ G EA
Sbjct: 233 DPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAES 292
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F M+ +D+V W+++I+G V N P +A++ YK M+ G DEV + ++ ACA LG
Sbjct: 293 VFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQ 352
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H + R L V V SL+DMY+K ++ A +F + ++++W ++I+G
Sbjct: 353 LDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVING 412
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
N L +M +P+SV+L+SAL ACA++G L GK IH + ++ F+
Sbjct: 413 LRINNRCFEALIFFRKM-ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFD 471
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +++D+Y +CG A F+ + +D+ +WN+++ Y G G + LF +M+E
Sbjct: 472 GFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVE 530
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ + PD TF SLL A S SG+V EG +F M Y I P KHYAC+VDLL RAG++
Sbjct: 531 SEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLN 590
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + ++ M +P A+W ALL+ C H+ +GE A+ + K + + +G + L+ N +A
Sbjct: 591 EAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYA 650
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW+EVA VR+TM++ G+ PG S VEV G++HAF+ D H Q ++I VL+ Y
Sbjct: 651 DSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYE 710
Query: 552 EMRA 555
+M+
Sbjct: 711 KMKT 714
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 245/482 (50%), Gaps = 14/482 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ + +G D+ +A +F + R + ++N ++ Y++ E L LY++++
Sbjct: 72 GNALLSMFVRFG---DVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD TF L++C MDL G E+ V + DV V ++++ +YVKCG +
Sbjct: 129 AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F+KM +D + W++MI+G N + E ++ + RM++ ID D + M +I AC
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACEL 248
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LGD R G +H Y +R + ++ V SL+ MY GH A VF M ++V+W +
Sbjct: 249 LGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG N L LE M+ G PD V++ S L ACA +G L +G +H R
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ S+IDMYSKC A +F Q+ +D+ISW +I I+ EAL F +
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLAR 426
MI KP+ T S LSA + G + G+ ++ K + ++DL R
Sbjct: 429 MI-LKSKPNSVTLISALSACARVGALMCGK---EIHAHALKAGMGFDGFLPNAILDLYVR 484
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHA 484
G + AL + E + W LL+G K ++ ++ K+++ ++NPDD+ +
Sbjct: 485 CGRMRTALNQFN--LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFIS 542
Query: 485 LV 486
L+
Sbjct: 543 LL 544
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 210/425 (49%), Gaps = 7/425 (1%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKC 124
Q +K V D F ++ C + GE +W+ + L V +G+++L+++V+
Sbjct: 25 QEVKIPVEED--CFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRF 82
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G + A F +M +DL W+ ++ G G EA+ Y R+ GI D ++
Sbjct: 83 GDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVL 142
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
++CA D G VH + +R ++DV V +L+ MY K G + A +F M + +
Sbjct: 143 RSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRI 202
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W A+ISG+ +N LEL M+ +PD +++ S + AC +G +LG +H Y
Sbjct: 203 SWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYV 262
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
VR +D N+ + S+I MY G A ++F M+ RD++SW II+ + ++AL
Sbjct: 263 VRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKAL 322
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+ M T PD T AS+LSA + G ++ G +L I + ++D+
Sbjct: 323 ETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANS-LIDM 381
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH-NHKKFSIGEKVAKKVLKLNPDDLGI 482
++ +E+AL+I + + ++ W ++++G N++ F K +LK P+ + +
Sbjct: 382 YSKCKRIEKALEIFHQIPDKDVIS-WTSVINGLRINNRCFEALIFFRKMILKSKPNSVTL 440
Query: 483 HALVS 487
+ +S
Sbjct: 441 ISALS 445
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 320/586 (54%), Gaps = 42/586 (7%)
Query: 12 SVGRIIALY---GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
S+ R+I+ + G K+ + +R LF ++ + +N++I YSR ++P E + LY MI
Sbjct: 43 SISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMI 102
Query: 69 KEDVRPDSS-TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ + P ++ TF L +C L L+ G E+ ++ G+ +D+FV +++++LY G +
Sbjct: 103 AKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNL 162
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
N A F++ +DLV +++MI G QP A+ + M+ GI DE + L C
Sbjct: 163 NLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVC 222
Query: 188 ADLGDSRFGLSVHG--YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS------ 239
+ L + G +H Y R ++ ++ +++++VDMYAK G +++A VF M
Sbjct: 223 SVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAA 282
Query: 240 -------------RINI-------------VTWGALISGFAQNGLAGSTLELLMEMQSCG 273
IN+ ++W A+ISG++Q G LEL EM++ G
Sbjct: 283 AWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALG 342
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCA 331
+PD V+LV+ L ACA++G LGK ++ + F+ N +L +V+DMY+KCG A
Sbjct: 343 IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSA 402
Query: 332 RALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+F ++ + +N +IA HG GE A+++F ++I T +KPD TF +L A
Sbjct: 403 LEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
HSGL+EEG+ F+ M + Y I+P +HY CMVDLL R G +EEA +V M E +W
Sbjct: 463 HSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIW 522
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
ALLS C H IGE +K+L++ + L+SN A +WEE VRK M
Sbjct: 523 RALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDH 582
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
G++K PG+S +E+ G +H F+ DKSH Q ++I +LK + + +++
Sbjct: 583 GIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKS 628
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 171/368 (46%), Gaps = 20/368 (5%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH---VFKNMS 239
L+++C + GL +H +I L+ + + L+ ++ G D H +F +
Sbjct: 15 LLESCKSF---KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKLGK 298
N+ W +I G++++ + L M M + G P++ + L +CA++ L+ G
Sbjct: 72 CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + ++ F+ +L + ++I +YS G + AR LFD+ RDL+S+N +I Y
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK----IQPT 413
E AL LF +M + + PD TF +L S S ++ E + YK I
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCS---VLNEPNVGKQIHAQVYKNLRSIDSN 248
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
+ +VD+ A+ G + A ++ +M T A W +++ G + ++ K+ +
Sbjct: 249 ILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMH 308
Query: 474 KLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK--KVPGYSVVEVNGELHAFIM 531
+ D + A++S ++ + E + K M G+K +V +V+ L AF +
Sbjct: 309 E--RDVISWTAMISG-YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365
Query: 532 EDKSHNQY 539
+ ++QY
Sbjct: 366 GKRLYHQY 373
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 297/512 (58%), Gaps = 1/512 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
YN++I K+ + LY M K + PDS TF+ LKAC L +G I
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ G+ DVFV ++++ Y KCG + +A F+ M K++V W+ MI G + G+ REAVD
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
++ + + G+ D V++ +++ACA LGD G + L+ +V V TSLVDMY
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G ++ A VF M +IV W A+I G+A NGL +EL EM+ PD ++V
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 284 ALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
AL +CA +G L+LG G F N VLGTS+ID Y+KCG A ++ M+ +D
Sbjct: 312 ALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKD 371
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+ +N +I+ ++G A +F QM + + P+ TF LL +H+GLV++GR++F+
Sbjct: 372 RVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFN 431
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M + + PT +HY CMVDLLARAG ++EA ++ M + + VW +LL GC H++
Sbjct: 432 SMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRET 491
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ E V K++++L P + G + L+SN ++ ++W+E +R T+ + GM+K+PGYS VEV
Sbjct: 492 QLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEV 551
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+G +H F++ D SH + I L+ L+ +++
Sbjct: 552 DGVVHEFLVGDTSHPLSQKIYEKLESLFKDLK 583
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 139/267 (52%), Gaps = 19/267 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR +F+ + + + ++++I Y+ P E + L+ +M K +VRPD
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAV---ELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
AL +C SL L++G W K + E N V +G+S+++ Y KCG M EA+
Sbjct: 306 CYAMVGALSSCASLGALELGN--WAKGLMNYEEFLSNPV-LGTSLIDFYAKCGSMEEALG 362
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG- 191
++ M+ KD V ++++I+GL GQ A + +M K GI +E +GL+ C G
Sbjct: 363 VYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGL 422
Query: 192 --DSR--FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTW 246
D R F H +S+ ++ +VD+ A+ G LD A ++ K M + N++ W
Sbjct: 423 VDDGRHYFNSMSHDFSV----TPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVW 478
Query: 247 GALISG---FAQNGLAGSTLELLMEMQ 270
G+L+ G + LA L+ L+E++
Sbjct: 479 GSLLGGCRLHRETQLAEHVLKQLIELE 505
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
K + N + +I G + + L M PDS + L ACA++
Sbjct: 62 KTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFH 121
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
LG IH + FD ++ + T+V+ YSKCG A +FD M ++++SW +I
Sbjct: 122 LGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCI 181
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
G EA+ LF ++E+ ++PD +L A + G +E GR W D + + +
Sbjct: 182 EFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGR-WIDRCMRECGLSRNV 240
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ + G +EEA + D M E + W A++ G
Sbjct: 241 FVATSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMIQG 280
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 317/565 (56%), Gaps = 44/565 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
R++ LY D+ +R F+++P + V +NS+I AY E +G + Q++ ++R
Sbjct: 56 RLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIR 115
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF LKAC +L+D G +I A +LG+ +VFV +S++++Y + G A
Sbjct: 116 PDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSL 172
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D+ W++MI+GL+ NG +A+D M+ EGI + V ++ ++
Sbjct: 173 FDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV------- 225
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
VDMYAK G LD A VF+ + ++++W LI+G+
Sbjct: 226 ------------------------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 261
Query: 254 AQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
AQNGLA +E+ M+ C P+ + VS L A A +G L+ G IHG ++ +
Sbjct: 262 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 321
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + T +ID+Y KCG A +LF Q+ ++WN II+ +GIHGH E+ L LF +M++
Sbjct: 322 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 381
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKPDH TF SLLSA SHSG VEEG++ F LM +Y I+P+ KHY CMVDLL RAG +E
Sbjct: 382 EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLE 440
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A + M +P ++W ALL C H +G+ + ++ +++ ++G + L+SN +A
Sbjct: 441 MAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYA 500
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KWE V VR R+ G+KK PG+S +EVN ++ F ++SH + ++I L+ L
Sbjct: 501 NVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 560
Query: 552 EMRAI------SSWLQGHMEEHEEH 570
+M+++ S LQ E+ +EH
Sbjct: 561 KMKSLGYIPDYSFVLQDVEEDEKEH 585
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 218/470 (46%), Gaps = 75/470 (15%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LG N+ I + DSST T K +L+ V G +F+ + ++NL
Sbjct: 13 LGNQNEEIDFNFLFDSSTKTPFAKCLHALL------------VVAGKVQSIFISTRLVNL 60
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA-YKRMKKEGIDADEVV 179
Y G ++ + F+++ +KD+ W+SMI+ V NG EA+ Y+ + I D
Sbjct: 61 YANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYT 120
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+++AC L D R +H ++ + +V V SL+ MY++ G +A +F +M
Sbjct: 121 FPPVLKACGTLVDGR---KIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP 177
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++ +W A+ISG QNG A L++L EM+ G + + V++VS L
Sbjct: 178 FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL-------------- 223
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
+DMY+K G+ A +F+ + +D+ISWN +I Y +G
Sbjct: 224 ----------------PVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLA 267
Query: 360 EEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY- 417
EA+ ++ M E + P+ T+ S+L A +H G +++G M ++ T H
Sbjct: 268 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG------MKIHGRVIKTNLHLD 321
Query: 418 ----ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSI---GEKV 468
C++D+ + G + +A+ + + E + W A++S G H H + ++ GE +
Sbjct: 322 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEML 380
Query: 469 AKKVLKLNPDDLGIHALVS----NFFAMEQKW----EEVAGVRKTMRKSG 510
+ V PD + +L+S + F E KW + G++ +++ G
Sbjct: 381 DEGV---KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 427
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 310/540 (57%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + KLF +P + T+N +I + + L L+ M K +RPD
Sbjct: 288 LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPD 347
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A L G+E+ V DVF+ S+++++Y KC + A ++
Sbjct: 348 SVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYD 407
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V S+MI+G V NG +EAV ++ + ++GI + V + ++ ACA + +
Sbjct: 408 SSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+++ V+++L+DMYAK G LDL+ ++F +S + VTW ++IS FAQ
Sbjct: 468 GQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQ 527
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG L L EM G + +V++ S L ACA + + GK IHG ++ +L
Sbjct: 528 NGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFA 587
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMY KCG A +F+ M ++ +SWN IIASYG +G +E++SL M E
Sbjct: 588 ESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGF 647
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K DH TF +L+SA +H+G V+EG F M +Y+I P +H+ACMVDL +RAG++++A+
Sbjct: 648 KADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAM 707
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ M +P +W ALL C H+ + E ++++ KL+P + G + L+SN A+
Sbjct: 708 ELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V+ VR+ M+ + ++K+PGYS V+VN H F+ DKSH EDI LK + LE+R
Sbjct: 768 RWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELR 827
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 232/426 (54%), Gaps = 2/426 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR++F+ + R +N ++ Y + S + L+ M P+
Sbjct: 187 LIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPN 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L + DL G ++ AV+ G ++V V ++++++Y KC +++ F
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M R DLV W+ MI+G V NG +A+ + M+K GI D V ++ L+ A DL
Sbjct: 307 LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQ 366
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY +R +++DV + ++LVD+Y K + +A V+ + I++V +ISG+
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVL 426
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG++ +++ + G P++V++ S L ACA + +KLG+ +H Y ++ ++ +
Sbjct: 427 NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY+KCG + +F ++ ++D ++WN +I+S+ +G EEAL+LF +M V
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K + T +S+LSA + + G+ +++ K I+ + ++D+ + G +E A
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVI-KGPIRADLFAESALIDMYGKCGNLEWAH 605
Query: 435 KIVDSM 440
++ +SM
Sbjct: 606 RVFESM 611
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 218/436 (50%), Gaps = 36/436 (8%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PDS TF +K+C +L + +G + R A LG D+FVGS+++ +Y G + +A
Sbjct: 144 PDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQV 203
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D V W+ M++G V G AV+ + M+ G + + + + A D
Sbjct: 204 FDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDL 263
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
FG+ +H +++ L +V V +LV MYAK LD +F M R ++VTW +ISG
Sbjct: 264 FFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGC 323
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG L L +MQ G PDSV+LVS L A + GK +HGY VR ++
Sbjct: 324 VQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV 383
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++++D+Y KC A++++D ++ D++ + +I+ Y ++G +EA+ +F ++E
Sbjct: 384 FLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ 443
Query: 373 MVKPDHSTFASLLSALS-----------HSGLVE---EGRYWFD------------LMVS 406
++P+ AS+L A + HS ++ EGR + + L +S
Sbjct: 444 GIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS 503
Query: 407 KY---KIQPT-EKHYACMVDLLARAGEVEEALKIVDSMSTEPGL----AVWVALLSGCHN 458
Y KI E + M+ A+ GE EEAL + M E G+ ++LS C +
Sbjct: 504 HYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCME-GVKYSNVTISSVLSACAS 562
Query: 459 HKKFSIGEKVAKKVLK 474
G+++ V+K
Sbjct: 563 LPAIYYGKEIHGVVIK 578
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 11/285 (3%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ +++ C GL VHG ++ L+ D +QT LV MY A VF ++
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 239 SR---INIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGF 293
R + W LI G G S L ++M PDS + + +CA +G
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 294 LKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+ LG+ +H T R D ++ +G+++I MY+ G+ AR +FD M RD + WNV++
Sbjct: 162 IALGRLVH-RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y G A+ LF M + +P+ +T A LS + + G L V KY ++
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV-KYGLE 279
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+V + A+ +++ K+ M + L W ++SGC
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGC 323
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 304/544 (55%), Gaps = 1/544 (0%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
S +I++Y + A +F+ L V + S+I ++ + L + +M
Sbjct: 40 TSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRAS 99
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD + F LK+C +MDL+ GE + V LG D++ G++++N+Y K ++
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSV 159
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
FE M RKD+V ++++I G +G +A+ + M + D + ++ ++
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEY 219
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G +HGY IR+ ++ DV + +SLVDMYAK+ ++ + VF ++ R + ++W +L+
Sbjct: 220 VDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLV 279
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+G+ QNG L L +M S P +V+ S + ACA + L LGK +HGY +R F
Sbjct: 280 AGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 339
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N+ + ++++DMYSKCG AR +FD+M D +SW II + +HGHG EA+SLF +M
Sbjct: 340 RNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEM 399
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
VKP+ F ++L+A SH GLV+E +F+ M Y + +HYA + DLL RAG+
Sbjct: 400 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 459
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+EEA + M EP +VW LLS C HK + EKVA+K+ ++ +++G + L+ N
Sbjct: 460 LEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNM 519
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +W+E+A +R +RK G++K P S +E+ + H F+ D+SH + I LK +
Sbjct: 520 YASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAV 579
Query: 550 YLEM 553
+M
Sbjct: 580 MEQM 583
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 310/540 (57%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + KLF +P + T+N +I + + L L+ M K +RPD
Sbjct: 288 LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPD 347
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A L G+E+ V DVF+ S+++++Y KC + A ++
Sbjct: 348 SVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYD 407
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V S+MI+G V NG +EAV ++ + ++GI + V + ++ ACA + +
Sbjct: 408 SSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+++ V+++L+DMYAK G LDL+ ++F +S + VTW ++IS FAQ
Sbjct: 468 GQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQ 527
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG L L EM G + +V++ S L ACA + + GK IHG ++ +L
Sbjct: 528 NGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFA 587
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMY KCG A +F+ M ++ +SWN IIASYG +G +E++SL M E
Sbjct: 588 ESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGF 647
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K DH TF +L+SA +H+G V+EG F M +Y+I P +H+ACMVDL +RAG++++A+
Sbjct: 648 KADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAM 707
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ M +P +W ALL C H+ + E ++++ KL+P + G + L+SN A+
Sbjct: 708 ELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V+ VR+ M+ + ++K+PGYS V+VN H F+ DKSH EDI LK + LE+R
Sbjct: 768 RWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELR 827
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 232/426 (54%), Gaps = 2/426 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR++F+ + R +N ++ Y + S + L+ M P+
Sbjct: 187 LIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPN 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L + DL G ++ AV+ G ++V V ++++++Y KC +++ F
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M R DLV W+ MI+G V NG +A+ + M+K GI D V ++ L+ A DL
Sbjct: 307 LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQ 366
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY +R +++DV + ++LVD+Y K + +A V+ + I++V +ISG+
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVL 426
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG++ +++ + G P++V++ S L ACA + +KLG+ +H Y ++ ++ +
Sbjct: 427 NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY+KCG + +F ++ ++D ++WN +I+S+ +G EEAL+LF +M V
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K + T +S+LSA + + G+ +++ K I+ + ++D+ + G +E A
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVI-KGPIRADLFAESALIDMYGKCGNLEWAH 605
Query: 435 KIVDSM 440
++ +SM
Sbjct: 606 RVFESM 611
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 218/436 (50%), Gaps = 36/436 (8%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PDS TF +K+C +L + +G + R A LG D+FVGS+++ +Y G + +A
Sbjct: 144 PDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQV 203
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D V W+ M++G V G AV+ + M+ G + + + + A D
Sbjct: 204 FDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDL 263
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
FG+ +H +++ L +V V +LV MYAK LD +F M R ++VTW +ISG
Sbjct: 264 FFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGC 323
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG L L +MQ G PDSV+LVS L A + GK +HGY VR ++
Sbjct: 324 VQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV 383
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++++D+Y KC A++++D ++ D++ + +I+ Y ++G +EA+ +F ++E
Sbjct: 384 FLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ 443
Query: 373 MVKPDHSTFASLLSALS-----------HSGLVE---EGRYWFD------------LMVS 406
++P+ AS+L A + HS ++ EGR + + L +S
Sbjct: 444 GIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS 503
Query: 407 KY---KIQPT-EKHYACMVDLLARAGEVEEALKIVDSMSTEPGL----AVWVALLSGCHN 458
Y KI E + M+ A+ GE EEAL + M E G+ ++LS C +
Sbjct: 504 HYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCME-GVKYSNVTISSVLSACAS 562
Query: 459 HKKFSIGEKVAKKVLK 474
G+++ V+K
Sbjct: 563 LPAIYYGKEIHGVVIK 578
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 11/285 (3%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ +++ C GL VHG ++ L+ D +QT LV MY A VF ++
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 239 SR---INIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGF 293
R + W LI G G S L ++M PDS + + +CA +G
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 294 LKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+ LG+ +H T R D ++ +G+++I MY+ G+ AR +FD M RD + WNV++
Sbjct: 162 IALGRLVH-RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y G A+ LF M + +P+ +T A LS + + G L V KY ++
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV-KYGLE 279
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+V + A+ +++ K+ M + L W ++SGC
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGC 323
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 300/542 (55%), Gaps = 22/542 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--------DVRPDSSTFT 80
AR +F ++P+R V +N+++ Y+ G+Y+ I +RP++ST
Sbjct: 154 ARNVFAKMPMRDVVAWNAMLAGYANH-------GMYHHAIAHLLDMQDHGGLRPNASTLV 206
Query: 81 VALKACVSLMDLKMGEEI----WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
L L G I R +E V +G+++L++Y KC ++ A F
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNE-EQVLIGTALLDMYAKCKQLVYACRVFHG 265
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
M ++ V WS++I G V + EA + +K M EG+ + ++ CA L D
Sbjct: 266 MPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHM 325
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ D+ SL+ MYAK G ++ A+ F ++ + +++GAL+SG Q
Sbjct: 326 GTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ 385
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVL 314
NG A + +MQ+C EPD ++VS + AC+ + L+ GK HG + R +
Sbjct: 386 NGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY+KCG +R +FD+M +RD++SWN +IA YGIHG G+EA +LFL M
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGF 505
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF L++A SHSGLV EG++WFD M KY I P +HY CMVDLLAR G ++EA
Sbjct: 506 APDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAY 565
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM + + VW ALL C HK +G++V++ + KL P+ G L+SN F+
Sbjct: 566 QFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAG 625
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++E A VR + G KK PGYS +E+NG LHAF+ D+SH DI + L + ++++
Sbjct: 626 RFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIK 685
Query: 555 AI 556
+
Sbjct: 686 KL 687
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 228/473 (48%), Gaps = 10/473 (2%)
Query: 23 KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVA 82
+ + AR++F+ +P YN++I AYS + LY M++ V P+ TF
Sbjct: 47 RGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFV 106
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
LKAC +L+DL+ G I A G D+FV +++++LY++C + A F KM +D+
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHG 201
V W++M+ G +G A+ M+ G+ + ++ L+ A G G S+H
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 202 YSIRRHLNLD---VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
Y +R L + V + T+L+DMYAK L A VF M N VTW ALI GF
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 259 AGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L +M G + S+ SAL CA + L +G +H + +L
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S++ MY+K G+ + A FD++ +D IS+ +++ +G EEA +F +M ++P
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D +T SL+ A SH ++ G+ ++ + T + ++D+ A+ G+++ + ++
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS-LIDMYAKCGKIDLSRQV 465
Query: 437 VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
D M + W +++ G H K + + K PDD+ L++
Sbjct: 466 FDKMPAR-DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 49/383 (12%)
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
L ++ G++ A F+++ D ++++I + G A+D Y+ M + + ++
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++AC+ L D R G ++H ++ L+ D+ V T+L+D+Y + A +VF
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKL 296
M ++V W A+++G+A +G+ + L++MQ G P++ +LVS L AQ G L
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 297 GKSIHGYTVR----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G SIH Y +R + + +++GT+++DMY+KC A +F M R+ ++W+ +I
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 353 YGIHGHGEEALSLFLQMI------------------------------------ETMVKP 376
+ + EA +LF M+ ++ +
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D + SLLS + +GL+ E +FD + K I Y ++ + G+ EEA +
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-----YGALLSGCVQNGKAEEAFLV 395
Query: 437 VDSMST---EPGLAVWVALLSGC 456
M EP +A V+L+ C
Sbjct: 396 FKKMQACNMEPDIATMVSLIPAC 418
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K+ + A + ++++Y I A F+E+ ++ +Y +++ + E
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFL 394
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
++ +M ++ PD +T + AC L L+ G+ + G + + +S++++Y
Sbjct: 395 VFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYA 454
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCGK++ + F+KM +D+V W++MI G +G +EA + MK +G D+V +
Sbjct: 455 KCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFIC 514
Query: 183 LIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
LI AC+ G F H Y I + + +VD+ A+ G LD A ++
Sbjct: 515 LIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQS 570
Query: 238 MS-RINIVTWGALI 250
M + ++ WGAL+
Sbjct: 571 MPLKADVRVWGALL 584
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D K ++ + G L LA VF + + + ALI ++ G + ++L M
Sbjct: 33 DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
P+ + L AC+ + L+ G++IH + +L + T++ID+Y +C
Sbjct: 93 RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSAL 388
AR +F +M RD+++WN ++A Y HG A++ L M + ++P+ ST SLL L
Sbjct: 153 PARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLL 212
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+ G + +G + Q E+ ++D+ A+ ++ A ++ M +
Sbjct: 213 AQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV 272
Query: 447 AVWVALLSG 455
W AL+ G
Sbjct: 273 -TWSALIGG 280
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 304/541 (56%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + AR++F+ + R + ++ ++I A+ E Y M +PD
Sbjct: 88 LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L A + L++G+++ + VE G + VG+S++ +Y KCG +++A V F+
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ K++V W+ +I G GQ A++ + M++ + +++ ++Q C
Sbjct: 208 RLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH 267
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y I+ ++ V SL+ MY K G L+ A +F ++ ++VTW A+++G+AQ
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + L MQ G +PD ++ S L +C+ FL+ GK IH V ++ ++ L
Sbjct: 328 LGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYL 387
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA-SYGIHGHGEEALSLFLQMIETM 373
++++ MY+KCG A +F+QM R++++W II HG EAL F QM +
Sbjct: 388 QSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQG 447
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD TF S+LSA +H GLVEEGR F M Y I+P +HY+C VDLL RAG +EEA
Sbjct: 448 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 507
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++ SM PG +VW ALLS C H GE+ A+ VLKL+PDD G + +S+ +A
Sbjct: 508 ENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAA 567
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++E+ VR+ M K + K PG S +EV+G++H F +EDKSH + E I L KL ++
Sbjct: 568 GRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQI 627
Query: 554 R 554
+
Sbjct: 628 K 628
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 211/400 (52%), Gaps = 5/400 (1%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E LG+ N MI + R S F L+ C L L+ G E+ ++ G + ++ +++L
Sbjct: 30 EALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 89
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KCG + +A F+ ++ +++V W++MI V + EA Y+ MK G D+V
Sbjct: 90 SMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKV 149
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ L+ A + + G VH + L L+ +V TSLV MYAK G + A +F +
Sbjct: 150 TFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRL 209
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+VTW LI+G+AQ G LELL MQ P+ ++ S L C L+ GK
Sbjct: 210 PEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGK 269
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y ++ + L + S+I MY KCG AR LF + RD+++W ++ Y G
Sbjct: 270 KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQPTEKH 416
+EA++LF +M + +KPD TF S+L++ S ++EG+ +V + Y + +
Sbjct: 330 FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ- 388
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+ +V + A+ G +++A + + MS E + W A+++GC
Sbjct: 389 -SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 142/257 (55%), Gaps = 16/257 (6%)
Query: 7 SAYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S YG V +I +Y + ARKLF +LP R V T+ +++ Y++ E + L
Sbjct: 278 SGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINL 337
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ +M ++ ++PD TFT L +C S L+ G+ I ++ V GY DV++ S+++++Y K
Sbjct: 338 FRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAK 397
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVF-NGQPREAVDAYKRMKKEGIDADEVVMMG 182
CG M++A + F +M +++V W+++I G +G+ REA++ + +MKK+GI D+V
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTS 457
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVFK 236
++ AC + GL G R + LD ++ + VD+ + GHL+ A +V
Sbjct: 458 VLSAC-----THVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVIL 512
Query: 237 NMSRI-NIVTWGALISG 252
+M I WGAL+S
Sbjct: 513 SMPFIPGPSVWGALLSA 529
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 152/315 (48%), Gaps = 11/315 (3%)
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S ++ L G+ +EA+ M +G V GL+Q CA L G VH ++
Sbjct: 16 SRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILK 75
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ + ++ +L+ MYAK G L A VF ++ NIV+W A+I F +
Sbjct: 76 SGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKC 135
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
M+ G +PD V+ VS L A L+LG+ +H V + +GTS++ MY+K
Sbjct: 136 YETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAK 195
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG S AR +FD++ +++++W ++IA Y G + AL L M + V P+ TFAS+
Sbjct: 196 CGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASI 255
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL----ARAGEVEEALKIVDSM 440
L + +E G+ V +Y IQ +V+ L + G +EEA K+ +
Sbjct: 256 LQGCTTPAALEHGK-----KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL 310
Query: 441 STEPGLAVWVALLSG 455
+ W A+++G
Sbjct: 311 PHR-DVVTWTAMVTG 324
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 300/542 (55%), Gaps = 22/542 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--------DVRPDSSTFT 80
AR +F ++P+R V +N+++ Y+ G+Y+ I +RP++ST
Sbjct: 154 ARNVFAKMPMRDVVAWNAMLAGYANH-------GMYHHAIAHLLDMQDHGGLRPNASTLV 206
Query: 81 VALKACVSLMDLKMGEEI----WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
L L G I R +E V +G+++L++Y KC ++ A F
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNE-EQVLIGTALLDMYAKCKQLVYACRVFHG 265
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
M ++ V WS++I G V + EA + +K M EG+ + ++ CA L D
Sbjct: 266 MPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHM 325
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ D+ SL+ MYAK G ++ A+ F ++ + +++GAL+SG Q
Sbjct: 326 GTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ 385
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVL 314
NG A + +MQ+C EPD ++VS + AC+ + L+ GK HG + R +
Sbjct: 386 NGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY+KCG +R +FD+M +RD++SWN +IA YGIHG G+EA +LFL M
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGF 505
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF L++A SHSGLV EG++WFD M KY I P +HY CMVDLLAR G ++EA
Sbjct: 506 APDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAY 565
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM + + VW ALL C HK +G++V++ + KL P+ G L+SN F+
Sbjct: 566 QFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAG 625
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++E A VR + G KK PGYS +E+NG LHAF+ D+SH DI + L + ++++
Sbjct: 626 RFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIK 685
Query: 555 AI 556
+
Sbjct: 686 KL 687
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 228/473 (48%), Gaps = 10/473 (2%)
Query: 23 KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVA 82
+ + AR++F+ +P YN++I AYS + LY M++ V P+ TF
Sbjct: 47 RGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFV 106
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
LKAC +L+DL+ G I A G D+FV +++++LY++C + A F KM +D+
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHG 201
V W++M+ G +G A+ M+ G+ + ++ L+ A G G S+H
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 202 YSIRRHLNLD---VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
Y +R L + V + T+L+DMYAK L A VF M N VTW ALI GF
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 259 AGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L +M G + S+ SAL CA + L +G +H + +L
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S++ MY+K G+ + A FD++ +D IS+ +++ +G EEA +F +M ++P
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D +T SL+ A SH ++ G+ ++ + T + ++D+ A+ G+++ + ++
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS-LIDMYAKCGKIDLSRQV 465
Query: 437 VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
D M + W +++ G H K + + K PDD+ L++
Sbjct: 466 FDKMPAR-DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 49/383 (12%)
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
L ++ G++ A F+++ D ++++I + G A+D Y+ M + + ++
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++AC+ L D R G ++H ++ L+ D+ V T+L+D+Y + A +VF
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKL 296
M ++V W A+++G+A +G+ + L++MQ G P++ +LVS L AQ G L
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 297 GKSIHGYTVR----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G SIH Y +R + + +++GT+++DMY+KC A +F M R+ ++W+ +I
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 353 YGIHGHGEEALSLFLQMI------------------------------------ETMVKP 376
+ + EA +LF M+ ++ +
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D + SLLS + +GL+ E +FD + K I Y ++ + G+ EEA +
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-----YGALLSGCVQNGKAEEAFLV 395
Query: 437 VDSMST---EPGLAVWVALLSGC 456
M EP +A V+L+ C
Sbjct: 396 FKKMQACNMEPDIATMVSLIPAC 418
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K+ + A + ++++Y I A F+E+ ++ +Y +++ + E
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFL 394
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
++ +M ++ PD +T + AC L L+ G+ + G + + +S++++Y
Sbjct: 395 VFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYA 454
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCGK++ + F+KM +D+V W++MI G +G +EA + MK +G D+V +
Sbjct: 455 KCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFIC 514
Query: 183 LIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
LI AC+ G F H Y I + + +VD+ A+ G LD A ++
Sbjct: 515 LIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQS 570
Query: 238 MS-RINIVTWGALI 250
M + ++ WGAL+
Sbjct: 571 MPLKADVRVWGALL 584
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D K ++ + G L LA VF + + + ALI ++ G + ++L M
Sbjct: 33 DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
P+ + L AC+ + L+ G++IH + +L + T++ID+Y +C
Sbjct: 93 RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSAL 388
AR +F +M RD+++WN ++A Y HG A++ L M + ++P+ ST SLL L
Sbjct: 153 PARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLL 212
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+ G + +G + Q E+ ++D+ A+ ++ A ++ M +
Sbjct: 213 AQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV 272
Query: 447 AVWVALLSG 455
W AL+ G
Sbjct: 273 -TWSALIGG 280
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 307/536 (57%), Gaps = 8/536 (1%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
+F+E+PLR V ++ +II R E L ++ M + V D+ TF+ ALKAC
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L G EI + ++ G+ FV +++ +Y KCGK++ + FE M ++D+V W+++I
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
V GQ AV A++RM++ + +E +I CA LG +G +H + IRR L
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V S++ MY+K LDLAS VF+ +SR +I++W +ISG+AQ G + L M+
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSC 330
G P+ + S L C + L+ GK +H + + + N ++ +++I+MYSKCG
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKE 424
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +FD+ + +++SW +I Y HG+ +EA+ LF ++ + ++PD TF ++L+A SH
Sbjct: 425 ASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSH 484
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GLV+ G ++F+ + ++I P++ HY CM+DLL RAG + +A ++ SM + VW
Sbjct: 485 AGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWS 544
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
LL C H G++ A+K+L+L+P+ H ++N +A + KW+E A VRK M+ G
Sbjct: 545 TLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKG 604
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEE 566
+ K PG+S ++ + AF+ D+SH + E I VL L +S + HM+E
Sbjct: 605 VVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLL-------ASQAEMHMQE 653
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 243/464 (52%), Gaps = 6/464 (1%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALKAC 86
+AR+LF+++ R ++ +II Y + E L L+++M ++ + D ++ALKAC
Sbjct: 19 NARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKAC 78
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
M + GE + +V+ + N VFVGS+++++Y+K GK++E + F++M +++V W+
Sbjct: 79 GLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWT 138
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++I GLV G +EA+ + M + + D ++ACAD G +G +H ++++
Sbjct: 139 AIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKK 198
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
V +L MY K G LD +F++M++ ++V+W +I Q G + ++
Sbjct: 199 GFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAF 258
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
M+ P+ + + + CA +G ++ G+ +H + +RR +L + S++ MYSKC
Sbjct: 259 RRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKC 318
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
A +F + RD+ISW+ +I+ Y G GEEA M +P+ FAS+L
Sbjct: 319 WQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVL 378
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
S + ++E+G+ ++ Q T A ++++ ++ G ++EA KI D +
Sbjct: 379 SVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSA-LINMYSKCGSIKEASKIFDE-AEYNN 436
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ W A+++G H + KK+ K L PD + A+++
Sbjct: 437 IVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLA 480
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 215/460 (46%), Gaps = 37/460 (8%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K +A + +Y + +LFE + R V ++ +II++ + +
Sbjct: 196 LKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAV 255
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ +M + DV P+ TF + C +L ++ GE++ + G + + V +S++ +Y
Sbjct: 256 KAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMY 315
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC +++ A F+ + R+D++ WS+MI+G G EA D M++EG +E
Sbjct: 316 SKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFA 375
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ C ++ G +H + + L + VQ++L++MY+K G + AS +F
Sbjct: 376 SVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYN 435
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG---- 297
NIV+W A+I+G+A++G + ++L ++ G PDSV+ ++ L AC+ G + LG
Sbjct: 436 NIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYF 495
Query: 298 ---KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASY 353
+H + + +ID+ + G + A ++ M RD + W+ ++ +
Sbjct: 496 NSLSKVHQICPSKDHYG-----CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRAC 550
Query: 354 GIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSA-------------LSHSGLVEE- 396
IHG G+ A LQ+ + H T A++ +A + G+V+E
Sbjct: 551 RIHGDVDCGKRAAEKILQL-DPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEP 609
Query: 397 GRYWFDL------MVSKYKIQPTEKHYACMVDLLARAGEV 430
G W VS + P ++ ++DLLA E+
Sbjct: 610 GWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEM 649
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 2/278 (0%)
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVM 180
VK G +N A F+KM ++D + W+++I+G V EA+ + +M E G+ D ++
Sbjct: 12 VKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFIL 71
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++AC FG S+HGYS++ V V ++LVDMY K G +D VFK M
Sbjct: 72 SLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPL 131
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+V+W A+I+G + G L +M D+ + SAL ACA G L G+ I
Sbjct: 132 RNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREI 191
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H T+++ F + ++ MY+KCG LF+ M RD++SW II S G
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQE 251
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
E A+ F +M ET V P+ TFA+++S + G +E G
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWG 289
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ NLVL V K G + AR LFD+M RD ISW II+ Y + EALSLF +
Sbjct: 3 EINLVLKNLV-----KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSK 57
Query: 369 MIETMVKPDHSTFASLLS-ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLA 425
M V+P +LS AL GL + L K + + +VD+
Sbjct: 58 M---WVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYM 114
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G+V+E + M + W A+++G
Sbjct: 115 KIGKVDEGCIVFKEMPLR-NVVSWTAIIAG 143
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/569 (32%), Positives = 307/569 (53%), Gaps = 31/569 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD-TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
I+++Y N + + +F LP + SII Y+ L + QM+ P
Sbjct: 45 ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYP 104
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV-- 132
D + F LK+C + DL+ GE + + LG G D++ ++++N+Y K + E
Sbjct: 105 DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYK 164
Query: 133 ---------------------------AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
FE M ++D+V W+++I+G NG +A+
Sbjct: 165 KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 224
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ M + D + ++ A+ + G +HGY+IR + DV + +SL+DMYAK
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
+D + VF + + + ++W ++I+G QNG+ L+ +M +P+ VS S +
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344
Query: 286 LACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
ACA + L LGK +HGY +R RFD N+ + ++++DMY+KCG AR +FD+M+ D++
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 404
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SW +I Y +HGH +A+SLF +M VKP++ F ++L+A SH+GLV+E +F+ M
Sbjct: 405 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 464
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
Y+I P +HYA + DLL R G +EEA + + M EP +VW LL+ C HK +
Sbjct: 465 TQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIEL 524
Query: 465 GEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
EKV+KK+ ++P ++G + L+SN ++ +W++ +R MR GMKK P S +E+
Sbjct: 525 AEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKN 584
Query: 525 ELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++HAF+ DKSH Y+ I LK L +M
Sbjct: 585 KVHAFVAGDKSHPYYDRINEALKVLLEQM 613
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 288/518 (55%), Gaps = 3/518 (0%)
Query: 27 VSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRPDSSTFTVALKA 85
VS +L PL YN ++ A P + L L+ +M+ V PD T ALK+
Sbjct: 70 VSLFRLGPRPPL-STPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKS 128
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C + L +G I AV+ G D FV SS++++Y C + A + F+ ++ +V W
Sbjct: 129 CSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMW 188
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+++I + NG E V+ +K M + G+ DE+ ++ ++ AC +GD++ G V Y
Sbjct: 189 NAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDE 248
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ L + + T+L+DMYAK G L A +F M ++V W A+ISG+ Q L L
Sbjct: 249 KGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALAL 308
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
EMQ EP+ V++VS L ACA +G L+ GK +H Y R R ++LGT+++D Y+K
Sbjct: 309 FSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAK 368
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A F+ M ++ +W +I +G G EAL LF M + ++P TF +
Sbjct: 369 CGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGV 428
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L A SHS LVEEGR FD M Y I+P +HY C+VDLL RAG ++EA + + +M EP
Sbjct: 429 LMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEP 488
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
+W ALLS C HK IGE+ K+++ LNP G + L+SN +A +W+ A +RK
Sbjct: 489 NAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRK 548
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
M+ G++K PG S++E++G + F ED H Q ++I
Sbjct: 549 EMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEI 586
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 197/396 (49%), Gaps = 21/396 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L A + +I +Y D+ +A+ LF+ + GV +N+II AY + + EV+
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ M++ V D T + AC + D K+G+ + E G + + ++++++Y
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG++ +A F+ MQ +D+V WS+MI+G Q REA+ + M+ ++ ++V M+
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA LG G VH Y R+ L+L + + T+LVD YAK G +D A F++M
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK--- 298
N TW ALI G A NG LEL M+ EP V+ + L+AC+ ++ G+
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445
Query: 299 ----SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASY 353
+G R + V+D+ + G+ A M + + W +++S
Sbjct: 446 DSMTQDYGIKPRAEHYG-----CVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSC 500
Query: 354 GIHGH---GEEALSLFLQMIETMVKPDHSTFASLLS 386
+H + GEEAL + + P HS LLS
Sbjct: 501 AVHKNVEIGEEALKQIVSL-----NPSHSGDYILLS 531
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 308/541 (56%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I AR +F+ + R V ++N++I ++ E ++ +M +E PD
Sbjct: 275 LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPD 334
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T+ L VS + +E+ + AVE+G +D+ VGS+ +++Y++CG +++A + F+
Sbjct: 335 STTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFD 394
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ +++ W++MI G+ REA+ + +M++EG D + ++ A +
Sbjct: 395 KLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW 454
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH Y+I L +D++V +LV MYAK G+ A VF +M N+ TW +ISG AQ
Sbjct: 455 VKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQ 513
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G L ++M G PD+ + VS L ACA G L+ K +H + V +L +
Sbjct: 514 HGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRV 573
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++ MY+KCG AR +FD M RD+ SW V+I HG G +AL LF++M
Sbjct: 574 GNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGF 633
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ +F ++LSA SH+GLV+EGR F + Y I+PT +HY CMVDLL RAG++EEA
Sbjct: 634 KPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAK 693
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ +M EPG A W ALL C + + E AK+ LKL P + L+SN +A
Sbjct: 694 HFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATG 753
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
WE+ VR M++ G++K PG S +EV+ ++H+F++ D SH + ++I LK L ++
Sbjct: 754 NWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLK 813
Query: 555 A 555
A
Sbjct: 814 A 814
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 234/448 (52%), Gaps = 4/448 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I AR +F+ + R + ++ +I ++ E L+ QM + P+
Sbjct: 172 LVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPN 231
Query: 76 SSTFTVALKAC--VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+T+ L A S L+ +E+ + A + G+ +D+ VG++++++Y KCG +++A +
Sbjct: 232 LTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLV 291
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D++ W++MI GL NG EA + +M++EG D + L+ G
Sbjct: 292 FDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAW 351
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ VH +++ L D++V ++ V MY + G +D A +F ++ N+ TW A+I G
Sbjct: 352 EWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGV 411
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQ L L ++M+ GF PD+ + V+ L A L+ K +H Y + +L
Sbjct: 412 AQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLR 471
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G +++ MY+KCG A+ +FD M R++ +W V+I+ HG G EA SLFLQM+
Sbjct: 472 VGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREG 531
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ PD +T+ S+LSA + +G +E + V+ + A +V + A+ G V++A
Sbjct: 532 IVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNA-LVHMYAKCGSVDDA 590
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ D M E + W ++ G H +
Sbjct: 591 RRVFDDM-LERDVYSWTVMIGGLAQHGR 617
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 227/421 (53%), Gaps = 13/421 (3%)
Query: 47 IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
+I Y+ + + +Y+QM +E +P+ T+ LKAC S + LK G++I ++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+ +DV V ++++N+YVKCG +++A + F+KM ++++ W+ MI GL G+ +EA +
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+M++EG + + ++ A A G + VH +++ L LD++V +LV MYAK+G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+D A VF M +I +W +I G AQ+G L ++M+ G P+ + +S L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 287 ACA--QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
A A G L+ K +H + + F +L +G ++I MY+KCG AR +FD M RD+
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
ISWN +I +G G EA ++FL+M + PD +T+ SLL+ +G E W
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE----WVK- 355
Query: 404 MVSKYKIQ----PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
V K+ ++ + + V + R G +++A I D ++ + W A++ G
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQ 414
Query: 460 K 460
K
Sbjct: 415 K 415
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 222/450 (49%), Gaps = 12/450 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A+ +F+++ R V ++ +I + E + QM +E P+
Sbjct: 71 LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPN 130
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T+ L A S L+ +E+ AV G D+ VG++++++Y K G +++A V F+
Sbjct: 131 SYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 190
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA--DLGDS 193
M +D+ W+ MI GL +G+ +EA + +M++ G + + ++ A A G
Sbjct: 191 GMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGAL 250
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ VH ++ + D++V +L+ MYAK G +D A VF M ++++W A+I G
Sbjct: 251 EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGL 310
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
AQNG + ++MQ GF PDS + +S L G + K +H + V +L
Sbjct: 311 AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDL 370
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G++ + MY +CG A+ +FD++ R++ +WN +I G EALSLFLQM
Sbjct: 371 RVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRRE 430
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP---TEKHYACMVDLLARAGE 429
PD +TF ++LSA + EE W V Y I + +V + A+ G
Sbjct: 431 GFFPDATTFVNILSA----NVGEEALEWVK-EVHSYAIDAGLVDLRVGNALVHMYAKCGN 485
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
A ++ D M E + W ++SG H
Sbjct: 486 TMYAKQVFDDM-VERNVTTWTVMISGLAQH 514
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 34/382 (8%)
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G G +A+ Y +M++EG +E+ + +++AC ++G +H + I+
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
DV+V+T+LV+MY K G +D A +F M N+++W +I G A G +
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+MQ GF P+S + VS L A A G L+ K +H + V +L +G +++ MY+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL- 385
AR +FD M RD+ SW V+I HG G+EA SLFLQM P+ +T+ S+L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 386 -SALSHSGLVE--------EGRYWF--DLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
SA++ +G +E G+ F DL V ++ + A+ G +++A
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGN-----------ALIHMYAKCGSIDDAR 289
Query: 435 KIVDSMSTEPGLAVWVALL-----SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ D M ++ W A++ +GC H+ F+I K+ ++ PD +L+ N
Sbjct: 290 LVFDGMCDRDVIS-WNAMIGGLAQNGC-GHEAFTIFLKMQQE--GFVPDSTTYLSLL-NT 344
Query: 490 FAMEQKWEEVAGVRKTMRKSGM 511
WE V V K + G+
Sbjct: 345 HVSTGAWEWVKEVHKHAVEVGL 366
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 308/554 (55%), Gaps = 1/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK N ++ +Y + A+K+F+++ + V+ N++I A+ ++
Sbjct: 270 VIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDA 329
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LGLYN+M + DS T + L C + G + + ++ ++V + S++L +
Sbjct: 330 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTM 389
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +A F M+ +D+V W SMI G N + ++A+D ++ M+KEG+ AD VM
Sbjct: 390 YYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVM 449
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+I A L + G +HG++I+R L DV V SLVDMY+K G + A VF +M
Sbjct: 450 TSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN 509
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+V W ++IS ++ NGL ++ LL ++ GF DSVS+ + L+A + + L GK++
Sbjct: 510 KNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTL 569
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y +R + +L + ++IDMY KCG A+ +F+ M R+L++WN +IA YG HG+
Sbjct: 570 HAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNC 629
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EEA+ LF +M + PD TF +L+++ SHSG+VEEG F LM +Y ++P +HYA
Sbjct: 630 EEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYAS 689
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL RAG +++A + M + +VW+ LL C H+ +GE VA +LK+ P
Sbjct: 690 VVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPAR 749
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ + N + + W+ A +R +M+ G+KK PG S +EV + F D S +
Sbjct: 750 GSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRR 809
Query: 540 EDIVYVLKKLYLEM 553
+I L L M
Sbjct: 810 IEIYKTLSSLKSNM 823
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 249/479 (51%), Gaps = 10/479 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR-GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I +Y + + A LF +L R + +N +I + + L LY+ E+ +
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 242
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S++FT A AC L G ++ +++ + +D +V +S+L +Y K G + +A F
Sbjct: 243 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 302
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ K++ ++MI+ + NG+ +A+ Y +MK D + L+ C+ +G
Sbjct: 303 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 362
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +VH I+R + +V +Q++L+ MY K G + A VF M ++V WG++I+GF
Sbjct: 363 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 422
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN L+L M+ G + DS + S + A + ++LG IHG+ ++R + ++
Sbjct: 423 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVF 482
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++DMYSK G A +F M +++L++WN +I+ Y +G E +++L Q+++
Sbjct: 483 VACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG 542
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ-PTEKHYA-CMVDLLARAGEVE 431
D + ++L A+S + +G+ L + ++Q P++ ++D+ + G ++
Sbjct: 543 FYLDSVSITTVLVAVSSVAALLKGK---TLHAYQIRLQIPSDLQVENALIDMYVKCGCLK 599
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
A I ++M L W ++++G +H ++ K++ + PD++ AL+++
Sbjct: 600 YAQLIFENMPRR-NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITS 657
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 205/443 (46%), Gaps = 32/443 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
+RK + + NS I A ++ + L L+++ + TF LK C S
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK-----DLV 143
L +L G I V +G +D ++ +S++N+YVKCG + A+ F+KM D+
Sbjct: 68 LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W+ +I+G G E + + RM+ +L G +HGY
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQ-------------------ELSWYMAGRQIHGYI 168
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGFAQNGLAGST 262
IR D ++T+L+ MY+ A +F + +R NIV W +I GF +NG+ +
Sbjct: 169 IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS 228
Query: 263 LEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVI 319
LEL L + ++C S S A AC+ L G+ +H ++ F + + TS++
Sbjct: 229 LELYSLAKNENCKLV--SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLL 286
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
MY+K G A+ +FDQ+ +++ N +I+++ +G +AL L+ +M D
Sbjct: 287 TMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSF 346
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T +SLLS S G + GR V K +Q + ++ + + G E+A + +
Sbjct: 347 TISSLLSGCSVVGSYDFGRT-VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 405
Query: 440 MSTEPGLAVWVALLSGCHNHKKF 462
M E + W ++++G +++F
Sbjct: 406 MK-ERDVVAWGSMIAGFCQNRRF 427
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/551 (35%), Positives = 315/551 (57%), Gaps = 10/551 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR LF+++P R + ++N++I + + + L + ++M E ++ + T L C
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D+ I ++ G D+FV ++++N+Y K G + +A AF++M D+V W+S+
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH- 207
I N P A + +M+ G D + ++ L A D + SVHG+ +RR
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L DV + ++VDMYAK G LD A VF+ + ++++W LI+G+AQNGLA +E+
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 268 EMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
M+ C P+ + VS L A A +G L+ G IHG ++ ++ + T +ID+Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +LF Q+ ++WN II+ +GIHGH E+ L LF +M++ VKPDH TF SLL
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA SHSG VEEG++ F LM +Y I+P+ KHY CMVDLL RAG +E A + M +P
Sbjct: 629 SACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD 687
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
++W ALL C H +G+ + ++ +++ ++G + L+SN +A KWE V VR
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI------SSW 559
R+ G+KK PG+S +EVN ++ F ++SH + ++I L+ L +M+++ S
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFV 807
Query: 560 LQGHMEEHEEH 570
LQ E+ +EH
Sbjct: 808 LQDVEEDEKEH 818
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 279/518 (53%), Gaps = 35/518 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
R++ LY D+ +R F+++P + V +NS+I AY E +G + Q++ ++R
Sbjct: 156 RLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIR 215
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF LKAC +L+D G +I A +LG+ +VFV +S++++Y + G A
Sbjct: 216 PDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSL 272
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D+ W++MI+GL+ NG +A+D M+ EGI + V ++ ++ C LGD
Sbjct: 273 FDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDI 332
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ +H Y I+ L D+ V +L++MYAK G+L+ A F+ M ++V+W ++I+ +
Sbjct: 333 STAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAY 392
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFN 311
QN + ++MQ GF+PD ++LVS AQ K +S+HG+ +RR +
Sbjct: 393 EQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMED 452
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+V+G +V+DMY+K G+ A +F+ + +D+ISWN +I Y +G EA+ ++ M E
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 512
Query: 372 TM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-----ACMVDLLA 425
+ P+ T+ S+L A +H G +++G M ++ T H C++D+
Sbjct: 513 CKEIIPNQGTWVSILPAYAHVGALQQG------MKIHGRVIKTNLHLDVFVATCLIDVYG 566
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSI---GEKVAKKVLKLNPDDL 480
+ G + +A+ + + E + W A++S G H H + ++ GE + + V PD +
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEMLDEGV---KPDHV 622
Query: 481 GIHALVS----NFFAMEQKW----EEVAGVRKTMRKSG 510
+L+S + F E KW + G++ +++ G
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 660
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 203/412 (49%), Gaps = 20/412 (4%)
Query: 48 IIAYSRKESPFEVLGLYNQM--IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL 105
+ + +R F GL NQ I + DSST T K +L+ V
Sbjct: 98 LFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALL------------VVA 145
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA- 164
G +F+ + ++NLY G ++ + F+++ +KD+ W+SMI+ V NG EA+
Sbjct: 146 GKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCF 205
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
Y+ + I D +++AC L D R +H ++ + +V V SL+ MY++
Sbjct: 206 YQLLLVSEIRPDFYTFPPVLKACGTLVDGR---KIHCWAFKLGFQWNVFVAASLIHMYSR 262
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G +A +F +M ++ +W A+ISG QNG A L++L EM+ G + + V++VS
Sbjct: 263 FGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSI 322
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L C Q+G + IH Y ++ +F+L + ++I+MY+K G AR F QM D+
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDV 382
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SWN IIA+Y + A F++M +PD T SL S ++ S + R
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + + +VD+ A+ G ++ A K+ + + + ++ W L++G
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVIS-WNTLITG 493
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKTNL +I +YG +V A LF ++P T+N+II + +
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT 605
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M+ E V+PD TF L AC ++ G+ +R E G + M++L
Sbjct: 606 LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDL 665
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQ 157
+ G + A + M + D W +++ +G
Sbjct: 666 LGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 703
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 308/554 (55%), Gaps = 1/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK N ++ +Y + A+K+F+++ + V+ N++I A+ ++
Sbjct: 675 VIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDA 734
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LGLYN+M + DS T + L C + G + + ++ ++V + S++L +
Sbjct: 735 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTM 794
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +A F M+ +D+V W SMI G N + ++A+D ++ M+KEG+ AD VM
Sbjct: 795 YYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVM 854
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+I A L + G +HG++I+R L DV V SLVDMY+K G + A VF +M
Sbjct: 855 TSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN 914
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+V W ++IS ++ NGL ++ LL ++ GF DSVS+ + L+A + + L GK++
Sbjct: 915 KNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTL 974
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y +R + +L + ++IDMY KCG A+ +F+ M R+L++WN +IA YG HG+
Sbjct: 975 HAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNC 1034
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EEA+ LF +M + PD TF +L+++ SHSG+VEEG F LM +Y ++P +HYA
Sbjct: 1035 EEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYAS 1094
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL RAG +++A + M + +VW+ LL C H+ +GE VA +LK+ P
Sbjct: 1095 VVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPAR 1154
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ + N + + W+ A +R +M+ G+KK PG S +EV + F D S +
Sbjct: 1155 GSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRR 1214
Query: 540 EDIVYVLKKLYLEM 553
+I L L M
Sbjct: 1215 IEIYKTLSSLKSNM 1228
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 246/477 (51%), Gaps = 6/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR-GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I +Y + + A LF +L R + +N +I + + L LY+ E+ +
Sbjct: 588 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 647
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S++FT A AC L G ++ +++ + +D +V +S+L +Y K G + +A F
Sbjct: 648 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 707
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ K++ ++MI+ + NG+ +A+ Y +MK D + L+ C+ +G
Sbjct: 708 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 767
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +VH I+R + +V +Q++L+ MY K G + A VF M ++V WG++I+GF
Sbjct: 768 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 827
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN L+L M+ G + DS + S + A + ++LG IHG+ ++R + ++
Sbjct: 828 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVF 887
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++DMYSK G A +F M +++L++WN +I+ Y +G E +++L Q+++
Sbjct: 888 VACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG 947
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D + ++L A+S + +G+ + + +I + ++D+ + G ++ A
Sbjct: 948 FYLDSVSITTVLVAVSSVAALLKGKTLHAYQI-RLQIPSDLQVENALIDMYVKCGCLKYA 1006
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
I ++M L W ++++G +H ++ K++ + PD++ AL+++
Sbjct: 1007 QLIFENMPRR-NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITS 1062
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 221/461 (47%), Gaps = 22/461 (4%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
+V RII N++ + + E + L V+ +++ ++ + L L+++
Sbjct: 385 TAVARII-----DNELTPKKAVLELMNLPQVEEIKALV----QQGKYSQALELHSKTPHS 435
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ TF LK C SL +L G I V +G +D ++ +S++N+YVKCG + A
Sbjct: 436 ALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSA 495
Query: 131 MVAFEKMQRK-----DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
+ F+KM D+ W+ +I+G G E + + RM++ GI D + ++
Sbjct: 496 LQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLG 555
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIV 244
C L G +HGY IR D ++T+L+ MY+ A +F + +R NIV
Sbjct: 556 ICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIV 615
Query: 245 TWGALISGFAQNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W +I GF +NG+ +LEL L + ++C S S A AC+ L G+ +H
Sbjct: 616 AWNVMIGGFVENGMWEKSLELYSLAKNENCKLV--SASFTGAFTACSHGEVLDFGRQVHC 673
Query: 303 YTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
++ F + + TS++ MY+K G A+ +FDQ+ +++ N +I+++ +G +
Sbjct: 674 DVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYD 733
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL L+ +M D T +SLLS S G + GR V K +Q + ++
Sbjct: 734 ALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT-VHAEVIKRSMQSNVAIQSALL 792
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
+ + G E+A + +M E + W ++++G +++F
Sbjct: 793 TMYYKCGSTEDADSVFYTMK-ERDVVAWGSMIAGFCQNRRF 832
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 301/514 (58%), Gaps = 1/514 (0%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A G + ++ +Y D+ ARK+FE +P R V ++ S++ + + L L+N+M
Sbjct: 165 ADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKM 224
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+++V P T + AC +L+ L G + ++ G ++ F+ +++L++YVKCG++
Sbjct: 225 RQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGEL 284
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+A F+++ DLV W++MI G NG P +A+ + K I + V + ++ A
Sbjct: 285 EDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSAS 344
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A L D G S+HG +++ L V +LVDMYAK + A+ +F ++S ++V W
Sbjct: 345 AQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWN 404
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+++SG+A+N + L L +M G PD++S+V AL A +G L +GKS HGY V+
Sbjct: 405 SMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKH 464
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F N+ + T+++++Y+KCG AR +FD+M R+ ++W +I YG+ G ++ LF
Sbjct: 465 AFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLF 524
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M++ V P+ F S+LS SH+G+V + +FD M + I P+ KHYACMVD+LAR
Sbjct: 525 GEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLAR 584
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG +EEAL+ +D+M + +VW A L GC H + GE+ K+++ L+P+ ++ L+
Sbjct: 585 AGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLI 644
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
SN + WE+ +R+ M++ G+ K+PGYS +
Sbjct: 645 SNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 231/446 (51%), Gaps = 9/446 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++ Y D+ SAR +F+ P +Y ++ + E E + L+ M + P
Sbjct: 69 KLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCP 128
Query: 75 ---DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D ++ALKAC+ D G + AV++G G D FV +S++++Y K G + A
Sbjct: 129 EAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECAR 187
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE++ +++V W+SM++G V NG + + + +M+++ + E + +I AC+ L
Sbjct: 188 KVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALI 247
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HG I++ L + + +L+DMY K G L+ A VF +S I++V W +I
Sbjct: 248 GLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIV 307
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFD 309
G+ QNG L L ++ + P+SV++ + L A AQ+ L LG+SIHG V+ +
Sbjct: 308 GYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVE 367
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ +V+ +++DMY+KC S A +F + ++D+++WN +++ Y + +AL LF QM
Sbjct: 368 YTVVV-NALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQM 426
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
PD + LSA G + G+ + V K+ +++L + G+
Sbjct: 427 SLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAV-KHAFLSNIYVSTALLNLYNKCGD 485
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
+ A ++ D M+ + W A++ G
Sbjct: 486 LPSARRVFDEMNDRNSV-TWCAMIGG 510
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 327/571 (57%), Gaps = 8/571 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + A K+F ++P+R V ++N++I + + + E L + ++M E+V+ D
Sbjct: 188 LIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMD 247
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + L C D+ G + ++ G +DVFV ++++N+Y K G++ +A F+
Sbjct: 248 TVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFD 307
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ +DLV W+S+I N P A+ +K M G+ D + ++ L L D R
Sbjct: 308 GMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRI 367
Query: 196 GLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +VHG+ +R R L +D+ + +LV+MYAK G +D A VF+ + ++++W LI+G+A
Sbjct: 368 GRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYA 427
Query: 255 QNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NL 312
QNGLA ++ M+ P+ + VS L A + +G L+ G IHG ++ F ++
Sbjct: 428 QNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDV 487
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T +IDMY KCG A +LF ++ + WN II+S GIHGHGE+AL LF M
Sbjct: 488 FVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRAD 547
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK DH TF SLLSA SHSGLV+E ++ FD M +Y+I+P KHY CMVDL RAG +E+
Sbjct: 548 GVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEK 607
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +V +M + ++W LL+ C H +G + ++L+++ +++G + L+SN +A
Sbjct: 608 AYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYAN 667
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KWE VR R G++K PG+S V V + F ++SH Q +I L+ L +
Sbjct: 668 VGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAK 727
Query: 553 MRAIS-----SWLQGHMEEHEEHDPLSTAAQ 578
M+++ S++ +EE E+ + L++ ++
Sbjct: 728 MKSLGYVPDYSFVLQDVEEDEKEEILTSHSE 758
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 250/469 (53%), Gaps = 36/469 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVR 73
+++ LY D+ + F+ + + + ++NS++ AY R+ + + +++ VR
Sbjct: 88 QLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVR 147
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF LKAC+SL D GE++ +++G+ +DV+V +S+++LY + G + A
Sbjct: 148 PDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKV 204
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M +D+ W++MI+G NG EA+ RMK E + D V + ++ CA D
Sbjct: 205 FVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDV 264
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G+ VH Y I+ L DV V +L++MY+K G L A VF M ++V+W ++I+ +
Sbjct: 265 VGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAY 324
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFN 311
QN + L EM G PD +++VS Q+ ++G+++HG+ V R + +
Sbjct: 325 EQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVD 384
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+V+G ++++MY+K G CARA+F+Q+ SRD+ISWN +I Y +G EA+ + M E
Sbjct: 385 IVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEE 444
Query: 372 -TMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYACM 420
+ P+ T+ S+L A SH G +++G + D+ V+ C+
Sbjct: 445 GRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVA-----------TCL 493
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEK 467
+D+ + G +E+A+ + + E + W A++S G H H GEK
Sbjct: 494 IDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSLGIHGH-----GEK 536
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 195/379 (51%), Gaps = 9/379 (2%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F + ++C ++ + +++ + LG DV + + ++ LY G ++ + F+ +Q
Sbjct: 54 FNLVFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGDSRFGL 197
RK++ W+SM++ V G+ R+++D + G+ D +++AC L D G
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GE 167
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+H + ++ DV V SL+ +Y++ G +++A VF +M ++ +W A+ISGF QNG
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L +L M++ + D+V++ S L CAQ + G +H Y ++ + ++ +
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++I+MYSK G A+ +FD M+ RDL+SWN IIA+Y + AL F +M+ ++P
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D T SL S GR +V ++ +V++ A+ G ++ A +
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 437 VDSMSTEPGLAVWVALLSG 455
+ + + ++ W L++G
Sbjct: 408 FEQLPSRDVIS-WNTLITG 425
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 9/283 (3%)
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
DV + T LV +YA G L L+S FK++ R NI +W +++S + + G +++ + E+
Sbjct: 82 DVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELL 141
Query: 271 S-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVP 328
S G PD + L AC L G+ +H + ++ F+ ++ + S+I +YS+ G
Sbjct: 142 SLSGVRPDFYTFPPVLKACLS---LADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAV 198
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A +F M RD+ SWN +I+ + +G+ EAL + +M VK D T +S+L
Sbjct: 199 EVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPIC 258
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
+ S V G L V K+ ++ ++++ ++ G +++A ++ D M L
Sbjct: 259 AQSNDVVGG-VLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR-DLVS 316
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSNF 489
W ++++ + K++L + PD L + +L S F
Sbjct: 317 WNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIF 359
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 321/583 (55%), Gaps = 44/583 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+ +P R ++N+++ +++++ E L M ED + +F AL AC
Sbjct: 104 ALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAG 163
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
LMDL +G +I + Y DV++GS+++++Y KC + A AF+ M +++V W+S+
Sbjct: 164 LMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSL 223
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG------- 201
I NG +A++ + RM GI+ DE+ + + ACA L R GL +H
Sbjct: 224 ITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDK 283
Query: 202 --------------YSIRRHLN-----------LDVKVQTSLVDMYAKTGHLDLASHVFK 236
Y+ R +N DV +TS+V YAK + A +F
Sbjct: 284 YRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFS 343
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
NM N+V+W ALI+G+ QNG + L + ++ P + + L ACA + LKL
Sbjct: 344 NMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKL 403
Query: 297 GKSIHGYTVRRF-------DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
G+ H + ++ D ++ +G S+IDMY KCG+ R +F++M RD +SWN +
Sbjct: 404 GRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAM 463
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I Y +G+G EAL +F +M+ + +PDH T +LSA SH+GLVEEGR +F M ++
Sbjct: 464 IVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHG 523
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ P + HY CMVDLL RAG ++EA ++ +M EP VW +LL+ C H ++G+ VA
Sbjct: 524 LVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVA 583
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+++L+++P + G + L+SN +A +W++V VRK MR+ G+ K PG S + + LH F
Sbjct: 584 ERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVF 643
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEHEEHDP 572
+++DK H +DI +LK L +M+ + G++ E ++ +P
Sbjct: 644 MVKDKRHPHKKDIYLILKILTEQMKRV-----GYVPEADDDEP 681
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 220/474 (46%), Gaps = 92/474 (19%)
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
GL +++ + DSS F L CV + + + ++ + +++F+ + ++++Y
Sbjct: 5 GLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVY 64
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + +A F+ MQ+++ W++++ L G EA++ +K M + + ++
Sbjct: 65 GKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVS 124
Query: 182 GLIQ-------------------------------ACADLGDSRFGLSVHGYSIRRHLNL 210
G Q ACA L D G+ +HG + +L
Sbjct: 125 GFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSL 184
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
DV + ++LVDMY+K + A F +M NIV+W +LI+ + QNG AG LE+ + M
Sbjct: 185 DVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMM 244
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVP 328
+CG EPD ++L S ACA + ++ G IH ++ ++ +LVLG +++DMY+KC
Sbjct: 245 NCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRV 304
Query: 329 SCARALFDQMQSRD-------------------------------LISWNVIIASYGIHG 357
+ AR +FD+M RD ++SWN +IA Y +G
Sbjct: 305 NEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNG 364
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWF------ 401
EEA+ LFL + + P H TF +LL+A ++ ++ GR +WF
Sbjct: 365 ENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDS 424
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
D+ V ++D+ + G VE+ + + M ++ W A++ G
Sbjct: 425 DIFVGN-----------SLIDMYMKCGLVEDGRLVFERMLERDNVS-WNAMIVG 466
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 185/389 (47%), Gaps = 51/389 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA++ F+++ +R + ++NS+I Y + + L ++ +M+ + PD
Sbjct: 192 LVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPD 251
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T AC SL ++ G +I + ++ Y ND+ +G++++++Y KC ++NEA + F
Sbjct: 252 EITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 135 EKMQRKD-------------------------------LVCWSSMINGLVFNGQPREAVD 163
++M +D +V W+++I G NG+ EAV
Sbjct: 312 DRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVR 371
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV------HGYSIRRHLNLDVKVQTS 217
+ +K+E I L+ ACA+L D + G HG+ + + D+ V S
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNS 431
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMY K G ++ VF+ M + V+W A+I G+AQNG LE+ EM G PD
Sbjct: 432 LIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPD 491
Query: 278 SVSLVSALLACAQIGFLKLGKSI-------HGYTVRRFDFNLVLGTSVIDMYSKCGVPSC 330
V+++ L AC+ G ++ G+ HG + + T ++D+ + G
Sbjct: 492 HVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY-----TCMVDLLGRAGCLDE 546
Query: 331 ARALFDQM-QSRDLISWNVIIASYGIHGH 358
A L M D + W ++A+ +HG+
Sbjct: 547 ANNLIQTMPMEPDAVVWGSLLAACKVHGN 575
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 17/275 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ Y + + +AR +F + R V ++N++I Y++ E + L+ + +E + P
Sbjct: 325 MVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 76 SSTFTVALKACVSLMDLKMGEE---------IWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
TF L AC +L DLK+G + W K+ G +D+FVG+S++++Y+KCG
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS---GEDSDIFVGNSLIDMYMKCGL 441
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ + + FE+M +D V W++MI G NG EA++ ++ M G D V M+G++ A
Sbjct: 442 VEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSA 501
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQ-TSLVDMYAKTGHLDLASHVFKNMS-RINIV 244
C+ G G H + VK T +VD+ + G LD A+++ + M + V
Sbjct: 502 CSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAV 561
Query: 245 TWGALISGFAQNG---LAGSTLELLMEMQSCGFEP 276
WG+L++ +G L E L+E+ P
Sbjct: 562 VWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGP 596
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 322/564 (57%), Gaps = 10/564 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR LF+++P R + ++N++I + + + L + ++M E + D
Sbjct: 213 LIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMD 272
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L C L D+ I ++ G ++FV ++++N+Y K G + +A F+
Sbjct: 273 SVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQ 332
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D+V W+S+I N P A + +M+ G++ D + ++ L A D +
Sbjct: 333 QMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKN 392
Query: 196 GLSVHGYSIRRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
SVHG+ +RR ++ V + +++DMYAK G +D A VF + ++V+W LISG+
Sbjct: 393 SRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYT 452
Query: 255 QNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNGLA +E+ M+ C + + + VS L A A +G L+ G IHG+ ++ ++
Sbjct: 453 QNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDV 512
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+GT +ID+Y KCG A LF Q+ + WN II+ +GIHGHGE+AL LF +M +
Sbjct: 513 FVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDE 572
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPDH TF SLLSA SHSGLV+EG+++F LM +Y I+P+ KHY CMVDLL RAG +E
Sbjct: 573 GVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEM 631
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + M P ++W ALL C H +G+ + ++ +++ +++G + L+SN +A
Sbjct: 632 AYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYAN 691
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KWE V VR R+ G+KK PG+S +EVN + F ++SH + ++I L+ L +
Sbjct: 692 VGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAK 751
Query: 553 MRAI------SSWLQGHMEEHEEH 570
M+++ S LQ E+ +EH
Sbjct: 752 MKSLGYIPDYSFVLQDVEEDEKEH 775
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 262/489 (53%), Gaps = 31/489 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
R++ LY D+ +R F+++ + V T+NS+I AY R E + + Q++ +
Sbjct: 113 RLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQ 172
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D TF LKAC +L+D G +I +LG+ DVFV +S++++Y + G + A
Sbjct: 173 ADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSL 229
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D+ W++MI+GL+ NG +A+D M+ EGI+ D V + ++ CA LGD
Sbjct: 230 FDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDI 289
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+H Y I+ L ++ V +L++MYAK G+L A VF+ M ++V+W ++I+ +
Sbjct: 290 STATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAY 349
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFN 311
QN + +MQ G EPD ++LVS AQ K +S+HG+ +RR
Sbjct: 350 EQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA 409
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+V+G +V+DMY+K GV A +F+ + +D++SWN +I+ Y +G EA+ ++ M E
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 372 TM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-----ACMVDLLA 425
+K + T+ S+L+A +H G +++G + + + I+ T H C++DL
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQG-----MRIHGHLIK-TNLHLDVFVGTCLIDLYG 523
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLN-----PD 478
+ G + +A+ + + E + W A++S G H H GEK K ++ PD
Sbjct: 524 KCGRLVDAMCLFYQVPRESSVP-WNAIISCHGIHGH-----GEKALKLFREMQDEGVKPD 577
Query: 479 DLGIHALVS 487
+ +L+S
Sbjct: 578 HVTFISLLS 586
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 181/346 (52%), Gaps = 6/346 (1%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA-YKRMKK 170
F+ ++NLY G ++ + F+++QRKD+ W+SMI+ V NG REA+D Y+ +
Sbjct: 109 FISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLV 168
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
AD +++AC L D R +H + + DV V SL+ MY++ G + +
Sbjct: 169 TKFQADFYTFPPVLKACQTLVDGR---KIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGI 225
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A +F +M ++ +W A+ISG QNG A L++L EM+ G DSV++ S L CAQ
Sbjct: 226 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQ 285
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+G + IH Y ++ +F L + ++I+MY+K G A+ +F QM RD++SWN I
Sbjct: 286 LGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSI 345
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA+Y + A F +M ++PD T SL S + S + R ++ +
Sbjct: 346 IAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGW 405
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++D+ A+ G ++ A K+ + + + + W L+SG
Sbjct: 406 LMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISG 450
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 319/544 (58%), Gaps = 3/544 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A+ LF++ + + ++NS+I Y+R+E L +M ED +
Sbjct: 245 LIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMK 304
Query: 76 SSTFTV--ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ FT+ L C+ +L+ +E+ + G ++ V ++ + Y +CG + +
Sbjct: 305 ADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERV 364
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M K + W++++ G N PR+A+D Y +M G+D D + L+ AC+ +
Sbjct: 365 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSL 424
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+G +HG+++R L +D + SL+ +Y G A +F M ++V+W +I+G+
Sbjct: 425 HYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGY 484
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+QNGL + L +M S G +P ++++ AC+Q+ L+LGK +H + ++ ++
Sbjct: 485 SQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDI 544
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +S+IDMY+K G ++ +FD+++ +D+ SWNVIIA YGIHG G+EAL LF +M+
Sbjct: 545 FVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 604
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD TF +L A SH+GLVE+G +F+ M++ + I+P +HY C+VD+L RAG +++
Sbjct: 605 GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDD 664
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL++++ M +P +W +LLS C H +GEKVA K+L+L P+ + L+SN FA
Sbjct: 665 ALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAG 724
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KW++V VR M+ G++K G S +EV G++H F++ D+ + E++ ++L ++
Sbjct: 725 SGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVK 784
Query: 553 MRAI 556
+ +I
Sbjct: 785 ISSI 788
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 213/382 (55%), Gaps = 6/382 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVR 73
RII +Y +R +F++L + + +N+I+ AY+R E + + +++++I + +
Sbjct: 39 RIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK 98
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T +KAC L+DL +G+ I A ++ +DVFVG++++ +Y KCG + EA+
Sbjct: 99 PDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKV 158
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM--KKEGIDADEVVMMGLIQACADLG 191
FE M ++LV W+S+I G NG +E+ +A++ M +E D ++ ++ CA
Sbjct: 159 FEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEE 218
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D G++VHG +++ LN ++ V SL+DMY+K L A +F + NIV+W ++I
Sbjct: 219 DIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIG 278
Query: 252 GFAQNGLAGSTLELLMEMQS--CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
G+A+ T LL +MQ+ + D ++++ L C + L+ K +HGY+ R
Sbjct: 279 GYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGL 338
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N ++ + I Y++CG + +FD M ++ + SWN ++ Y + +AL L+LQ
Sbjct: 339 QSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQ 398
Query: 369 MIETMVKPDHSTFASLLSALSH 390
M ++ + PD T SLL A S
Sbjct: 399 MTDSGLDPDWFTIGSLLLACSR 420
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 190/390 (48%), Gaps = 25/390 (6%)
Query: 81 VALKACVSLMDLKMGEEIWRK-AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
V L+AC D+++G + + + ND + + ++ +Y CG +++ + F+K++R
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLS 198
K+L W+++++ N +A+ + + D + +I+ACA L D G
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+HG + + L DV V +L+ MY K G ++ A VF++M N+V+W ++I GF++NG
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 259 AGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLG 315
+ EM F PD +LV+ L CA ++ G ++HG V+ + L++
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-----LQMI 370
S+IDMYSKC S A+ LFD+ ++++SWN +I Y E+ F +Q
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGY---AREEDVCRTFYLLQKMQTE 299
Query: 371 ETMVKPDHSTFASLLS-ALSHSGLVE----EGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ +K D T ++L L S L G W ++ +Q E +
Sbjct: 300 DAKMKADEFTILNVLPVCLERSELQSLKELHGYSW------RHGLQSNELVANAFIAAYT 353
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
R G + + ++ D M T+ ++ W ALL G
Sbjct: 354 RCGALCSSERVFDLMDTKT-VSSWNALLCG 382
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 310/529 (58%), Gaps = 23/529 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SA +LF++L R V ++NS+I Y LG+Y QM+ + D +T L C
Sbjct: 203 SAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L +G+ + A++ + + +++L++Y KCG ++ A+ FEKM +++V W+S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G +G+ A+ ++M+KEG+ D V + ++ ACA G G VH Y +
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ ++ V +L+DMYAK G ++ A+ VF M +I++W +I
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL-------------- 428
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+PDS ++ L ACA + L+ GK IHGY +R + + + +++D+Y KCG
Sbjct: 429 -------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
V AR LFD + S+DL+SW V+IA YG+HG+G EA++ F +M + ++PD +F S+L
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSGL+E+G +F +M + + I+P +HYACMVDLL+R G + +A + ++++ P
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL GC N+ + EKVA++V +L P++ G + L++N +A +KWEEV +R+ +
Sbjct: 602 TIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKI 661
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIM-EDKSHNQYEDIVYVLKKLYLEMR 554
K G++K PG S +E+ G+++ F+ + SH ++I +LKK+ +M+
Sbjct: 662 GKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 229/522 (43%), Gaps = 88/522 (16%)
Query: 37 PLRGVD----TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
P R +D YN+ I+ + + + L K ++ ++ T++ L+ C L
Sbjct: 58 PTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSEL--ETKTYSSVLQLCAGLKSF 115
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK------------ 140
G+++ G D +G +++ Y CG + E F+ M++K
Sbjct: 116 TDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEY 175
Query: 141 ---------------------------------------DLVCWSSMINGLVFNGQPREA 161
D++ W+SMI+G V NG
Sbjct: 176 AKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERG 235
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
+ YK+M GID D ++ ++ CA+ G G +VH +I+ + +L+DM
Sbjct: 236 LGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM 295
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y+K G LD A VF+ M N+V+W ++I+G+ ++G + ++LL +M+ G + D V++
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAI 355
Query: 282 VSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
S L ACA+ G L GK +H Y + NL + +++DMY+KCG A ++F M
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV 415
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+D+ISWN +I GE +KPD T A +L A + +E G+
Sbjct: 416 KDIISWNTMI--------GE-------------LKPDSRTMACVLPACASLSALERGKEI 454
Query: 401 FDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCH 457
++ +++H A +VDL + G + A + D M L W +++ G H
Sbjct: 455 HGYILRNG--YSSDRHVANALVDLYVKCGVLGLARLLFD-MIPSKDLVSWTVMIAGYGMH 511
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQKW 496
+ +I + + PD++ +++ S+ +EQ W
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 37/425 (8%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK++ N ++ +Y D+ A ++FE++ R V ++ S+I Y+R +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L QM KE V+ D T L AC L G+++ +++FV ++++++Y
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M A F M KD++ W++MI L +P D M
Sbjct: 398 AKCGSMEAANSVFSTMVVKDIISWNTMIGEL----KP-----------------DSRTMA 436
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA L G +HGY +R + D V +LVD+Y K G L LA +F +
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W +I+G+ +G + EM+ G EPD VS +S L AC+ G L+ G
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF- 555
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ + + DFN+ ++D+ S+ G S A + + + D W ++ +
Sbjct: 556 -FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNY 614
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI--QPTE 414
E A + ++ E ++P++S + LL + + E W ++ + KI Q
Sbjct: 615 HDIELAEKVAERVFE--LEPENSGYYVLL-----ANIYAEAEKWEEVKRLREKIGKQGLR 667
Query: 415 KHYAC 419
K+ C
Sbjct: 668 KNPGC 672
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 303/543 (55%), Gaps = 1/543 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I++ + II +Y ++ ARK+F+ +P T+N +I Y + E
Sbjct: 304 VIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEA 363
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ M+ V+ DS TF L + + LK +E+ V G DV++ S+++++
Sbjct: 364 VALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDI 423
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G + A F++ D+ ++MI+G V NG EA++ ++ + +EG+ + + M
Sbjct: 424 YFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTM 483
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ ACA L + G +H +++ L +V +S+ MYAK+G LDLA F+ M
Sbjct: 484 ASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV 543
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V W +I F+QNG ++L +M + G + DSVSL + L ACA L GK +
Sbjct: 544 KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + VR F + + +++IDMYSKCG + AR++FD M ++ +SWN IIA+YG HG
Sbjct: 604 HCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
E L LF +M+E ++PDH TF ++SA H+GLV+EG Y+F M +Y I +H+AC
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFAC 723
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDL RAG + EA + SM P W +LL C H + + +K +++L+P++
Sbjct: 724 MVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNN 783
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G + L+SN A +WE V VR M++ G++K+PGYS ++VNG H F D H Q
Sbjct: 784 SGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQS 843
Query: 540 EDI 542
+I
Sbjct: 844 VEI 846
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 229/447 (51%), Gaps = 3/447 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I A+ LF+ELP+R +N ++ Y + LG + +M V+P+
Sbjct: 218 LIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPN 277
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S +F L C + ++ G ++ + G+ +D V ++++ +Y KCG + +A F+
Sbjct: 278 SVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFD 337
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + D V W+ +I G V NG EAV +K M G+ D + + + G ++
Sbjct: 338 IMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKY 397
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH Y +R + DV ++++LVD+Y K G +++A F+ + +++ A+ISG+
Sbjct: 398 CKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVL 457
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-L 314
NGL L L + G P+ +++ S L ACA + LKLGK +H +++ N+ +
Sbjct: 458 NGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQV 517
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+S+ MY+K G A F +M +D + WN++I S+ +G E A+ LF QM +
Sbjct: 518 GSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGT 577
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K D + ++ LSA ++ + G+ +V I T + ++D+ ++ G++ A
Sbjct: 578 KFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGKLALAR 636
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ D M + ++ W ++++ NH +
Sbjct: 637 SVFDMMDWKNEVS-WNSIIAAYGNHGR 662
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 195/385 (50%), Gaps = 1/385 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R++ +Y LF L L +N +I +S L + +M+ +V P
Sbjct: 116 RMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAP 175
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF +KAC L ++ + + + A +G+ D+F+GSS++ LY G +++A F
Sbjct: 176 DKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLF 235
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ +D + W+ M+NG V NG A+ ++ M+ + + V + L+ CA G R
Sbjct: 236 DELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVR 295
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G+ +HG IR D V +++ MY+K G+L A +F M + + VTW LI+G+
Sbjct: 296 AGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV 355
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG + L M + G + DS++ S L + + G LK K +H Y VR F++
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVY 415
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L ++++D+Y K G A F Q D+ +I+ Y ++G EAL+LF +I+
Sbjct: 416 LKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEG 475
Query: 374 VKPDHSTFASLLSALSHSGLVEEGR 398
+ P+ T AS+L A + ++ G+
Sbjct: 476 MVPNCLTMASVLPACAALASLKLGK 500
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 182/361 (50%), Gaps = 3/361 (0%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+I K + G + +GS ML +YV C + F ++Q + W+ +I G
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G A+ + RM + D+ +I+AC L + VH + ++D+ +
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+SL+ +Y G++ A ++F + + + W +++G+ +NG S L EM++ +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+SVS V L CA G ++ G +HG +R F+ + + ++I MYSKCG AR +
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
FD M D ++WN +IA Y +G +EA++LF M+ + VK D TFAS L ++ SG +
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ + +V ++ + + +VD+ + G+VE A K +T +AV A++S
Sbjct: 396 KYCKEVHSYIV-RHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ-NTLVDVAVCTAMIS 453
Query: 455 G 455
G
Sbjct: 454 G 454
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 326/609 (53%), Gaps = 53/609 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
++++YG + A +F++L RG+ ++NS++ AY L L+++M +
Sbjct: 300 VVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHL 359
Query: 73 -RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD + L AC SL G ++ ++ G +DVFVG++++++Y KCGKM EA
Sbjct: 360 MSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEAN 419
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV------------ 179
F++M+ KD+V W++M+ G G+ A+ ++RM +E I+ D V
Sbjct: 420 KVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRG 479
Query: 180 -----------------------MMGLIQACADLGDSRFGLSVHGYSIRRHLNLD----- 211
++ L+ AC +G G H Y+I+ LNLD
Sbjct: 480 QGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPG 539
Query: 212 ---VKVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGALISGFAQNGLAGSTLELL 266
+KV L+DMYAK ++A +F ++S + +VTW +I G+AQ+G A + L+L
Sbjct: 540 ADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLF 599
Query: 267 MEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--DFNLVLGTSVIDMY 322
M +P+ +L AL+ACA++ L+ G+ +H Y +R F L + +IDMY
Sbjct: 600 SGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMY 659
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SK G A+ +FD M R+ +SW ++ YG+HG GE+AL +F +M + + PD TF
Sbjct: 660 SKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFL 719
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
+L A SHSG+V+ G +F+ M + + P +HYACMVDL RAG + EA+K+++ M
Sbjct: 720 VVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPM 779
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
EP VWVALLS C H +GE A ++L+L + G + L+SN +A ++W++VA +
Sbjct: 780 EPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARI 839
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQG 562
R TM+++G+KK PG S ++ + F + D+SH Q + I L L ++AI Q
Sbjct: 840 RYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQT 899
Query: 563 HMEEHEEHD 571
H+ D
Sbjct: 900 SFALHDVDD 908
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 250/528 (47%), Gaps = 61/528 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I Y N A L E LP V +N +I SP +V LY QM
Sbjct: 197 LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT 256
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF KAC +L L +G + G+ ++VFV ++++++Y KCG + A
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNM 316
Query: 134 FEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV-MMGLIQACAD 189
F+ + + DLV W+S+++ ++ A+ + +M + + +V+ ++ ++ ACA
Sbjct: 317 FDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACAS 376
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS---------- 239
L S G VHG+SIR L DV V ++VDMYAK G ++ A+ VF+ M
Sbjct: 377 LAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAM 436
Query: 240 -------------------------RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
+++VTW A+I+G+AQ G L++ +M CG
Sbjct: 437 VTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGS 496
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN----------LVLGTSVIDMYSK 324
P+ V+LVS L AC +G L GK H Y + +F N L + +IDMY+K
Sbjct: 497 RPNVVTLVSLLSACVSVGALLHGKETHCYAI-KFILNLDGPDPGADDLKVINGLIDMYAK 555
Query: 325 CGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQM--IETMVKPDHST 380
C AR +FD + + RD+++W V+I Y HG AL LF M ++ +KP+ T
Sbjct: 556 CQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFT 615
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+ L A + + GR ++ + C++D+ +++G+V+ A + D+M
Sbjct: 616 LSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNM 675
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALV 486
++ W +L++G H + +V ++ K L PD GI LV
Sbjct: 676 PQRNAVS-WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPD--GITFLV 720
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 12/319 (3%)
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM--Q 138
ALK C SL K+ + + G + ++++ Y+ A++ E++
Sbjct: 166 TALKECNSLAHAKLLHQ-----QSIMQGLLFHLATNLIGTYIASNSTAYAILLLERLPPS 220
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ W+ +I + G PR+ Y++MK G D + +ACA+L G S
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI---VTWGALISGFAQ 255
+H R +V V ++V MY K G L A ++F ++ I V+W +++S +
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340
Query: 256 NGLAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
A + L L +M + PD +SLV+ L ACA + G+ +HG+++R ++
Sbjct: 341 ASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVF 400
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G +V+DMY+KCG A +F +M+ +D++SWN ++ Y G E ALSLF +M E
Sbjct: 401 VGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEEN 460
Query: 374 VKPDHSTFASLLSALSHSG 392
++ D T+ ++++ + G
Sbjct: 461 IELDVVTWTAVITGYAQRG 479
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/519 (36%), Positives = 287/519 (55%), Gaps = 4/519 (0%)
Query: 27 VSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI--KEDVRPDSSTFTVALK 84
VS +L PL YN ++ A+ P + L L+ +M+ D T ALK
Sbjct: 70 VSLFRLGPRPPL-STPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALK 128
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+C + L +G + AV+ G D FV SS++++Y CG + A + F+ + +V
Sbjct: 129 SCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVM 188
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W++++ + NG E V+ +K M + G+ DEV ++ ++ AC +GD++ G V G+
Sbjct: 189 WNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVD 248
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
L + K+ T+L+DMYAK G + A +F M ++V W A+ISG+ Q L
Sbjct: 249 EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALG 308
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
L EMQ EP+ V++VS L ACA +G L+ GK +H Y R R +LGT+++D Y+
Sbjct: 309 LFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYA 368
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A F+ M ++ +W +I +G G EAL LF M E ++P TF
Sbjct: 369 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIG 428
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A SHS LVEEGR FD M Y I+P +HY CMVDLL RAG V+EA + + +M E
Sbjct: 429 VLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIE 488
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W ALLS C H+ IGE+ K+++ LNP G + L+SN +A +W++ A VR
Sbjct: 489 PNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVR 548
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
K M+ G++K PG S++E++G + F ED H + +I
Sbjct: 549 KEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREI 587
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 207/425 (48%), Gaps = 16/425 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L A + +I +Y D+ +AR +F+ GV +N+I+ AY + EV+
Sbjct: 147 VKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVV 206
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ M++ V D T + AC + D K+G+ + E G + + ++++++Y
Sbjct: 207 EMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY 266
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG++ +A F+ MQ +D+V WS+MI+G Q REA+ + M+ ++ ++V M+
Sbjct: 267 AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMV 326
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA LG G VH Y R+ L+L + T+LVD YAK G +D A F++M
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N TW ALI G A NG LEL M+ G EP V+ + L+AC+ ++ G+
Sbjct: 387 NSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHF 446
Query: 302 GYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH-- 356
R + + ++D+ + G+ A M + + W +++S +H
Sbjct: 447 DSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRN 506
Query: 357 -GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTE 414
G GEEAL + + P HS LLS + S G++ MV K K + E
Sbjct: 507 VGIGEEALKQIISL-----NPSHSGDYVLLSNIYASA----GQWKDAAMVRKEMKDRGIE 557
Query: 415 KHYAC 419
K C
Sbjct: 558 KTPGC 562
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 312/529 (58%), Gaps = 23/529 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SA +LF++L R V ++NS+I Y LG+Y QM+ + D +T L C
Sbjct: 203 SAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L +G+ + A++ + + +++L++Y KCG ++ A+ FEKM +++V W+S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G +G+ A+ ++M+KEG+ D V + ++ ACA G G VH Y +
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ ++ V +L+DMYAK G ++ A+ VF M +I++W +I EL
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------------EL-- 428
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+PDS ++ L ACA + L+ GK IHGY +R + + + +++D+Y KCG
Sbjct: 429 -------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
V AR LFD + S+DL+SW V+IA YG+HG+G EA++ F +M + ++PD +F S+L
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSGL+E+G +F +M + + I+P +HYACMVDLL+R G + +A + ++++ P
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDA 601
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL GC N+ + EKVA++V +L P++ G + L++N +A +KWEEV +R+ +
Sbjct: 602 TIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKI 661
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIM-EDKSHNQYEDIVYVLKKLYLEMR 554
K G++K PG S +E+ G+++ F+ + SH ++I +LKK+ +M+
Sbjct: 662 GKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 228/522 (43%), Gaps = 88/522 (16%)
Query: 37 PLRGVD----TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
P R +D YN+ I+ + + + L K ++ ++ T+ L+ C L
Sbjct: 58 PTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSEL--ETKTYGSVLQLCAGLKSF 115
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK------------ 140
G+++ G D +G +++ Y CG + E F+ M++K
Sbjct: 116 TDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEY 175
Query: 141 ---------------------------------------DLVCWSSMINGLVFNGQPREA 161
D++ W+SMI+G V NG
Sbjct: 176 AKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERG 235
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
+ YK+M GID D ++ ++ CA+ G G +VH +I+ + +L+DM
Sbjct: 236 LGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM 295
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y+K G LD A VF+ M N+V+W ++I+G+ ++G + ++LL +M+ G + D V++
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAI 355
Query: 282 VSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
S L ACA+ G L GK +H Y + NL + +++DMY+KCG A ++F M
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV 415
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+D+ISWN +I GE +KPD T A +L A + +E G+
Sbjct: 416 KDIISWNTMI--------GE-------------LKPDSRTMACVLPACASLSALERGKEI 454
Query: 401 FDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCH 457
++ +++H A +VDL + G + A + D M L W +++ G H
Sbjct: 455 HGYILRNG--YSSDRHVANALVDLYVKCGVLGLARLLFD-MIPSKDLVSWTVMIAGYGMH 511
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQKW 496
+ +I + + PD++ +++ S+ +EQ W
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 193/425 (45%), Gaps = 37/425 (8%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK++ N ++ +Y D+ A ++FE++ R V ++ S+I Y+R +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L QM KE V+ D T L AC L G+++ +++FV ++++++Y
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M A F M KD++ W++MI L +P D M
Sbjct: 398 AKCGSMEAANSVFSTMVVKDIISWNTMIGEL----KP-----------------DSRTMA 436
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA L G +HGY +R + D V +LVD+Y K G L LA +F +
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W +I+G+ +G + EM+ G EPD VS +S L AC+ G L+ G
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF- 555
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ + + DFN+ ++D+ S+ G S A + + + D W ++ +
Sbjct: 556 -FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNY 614
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI--QPTE 414
E A + ++ E ++P+++ + LL + + E W ++ + KI Q
Sbjct: 615 HDIELAEKVAERVFE--LEPENTGYYVLL-----ANIYAEAEKWEEVKRLREKIGKQGLR 667
Query: 415 KHYAC 419
K+ C
Sbjct: 668 KNPGC 672
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 309/541 (57%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y N + AR+ F LP V+T N++++ R E +GL+ MI+ +R D
Sbjct: 291 IVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFD 350
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + AC G+++ A++ G+ D+ V +++L+LY KC + EA + F+
Sbjct: 351 VVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQ 410
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M++KD V W+++I L NG + + + M + G+ D+ +++ACA L +
Sbjct: 411 GMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY 470
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VH I+ L D V +++VDMY K G +D A + + +V+W A++SGF+
Sbjct: 471 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSL 530
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
N + + EM G +PD + + L CA + ++LGK IHG +++ D +
Sbjct: 531 NKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD-DEY 589
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++++DMY+KCG + +F++++ RD +SWN +I Y +HG G EAL +F +M +
Sbjct: 590 ISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKEN 649
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V P+H+TF ++L A SH GL ++G +F LM + YK++P +H+ACMVD+L R+ +EA
Sbjct: 650 VVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEA 709
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+K ++SM + +W LLS C + I E A VL L+PDD ++ L+SN +A
Sbjct: 710 VKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAES 769
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW +V+ R+ +++ +KK PG S +EV E+H F++ DK+H + ++ +L L EM
Sbjct: 770 GKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 829
Query: 554 R 554
+
Sbjct: 830 K 830
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 235/466 (50%), Gaps = 5/466 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y DI +A LF+ +P V ++N+++ Y ++ E + L+ +M + V PD
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF V LK+C +L +L +G ++ AV+ G DV GS+++++Y KC +++A+ F
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V W + I G V N Q ++ + M++ G+ + ++CA +
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++I+ + D V T++VD+YAK L A F + + T A++ G +
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
GL + L M D VSL ACA+ G+ +H ++ FD ++ +
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+D+Y KC A +F M+ +D +SWN IIA+ +GH ++ + F +M+ +
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD T+ S+L A + +E G D ++ K + + +VD+ + G ++EA
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVI-KSGLGSDAFVASTVVDMYCKCGIIDEAQ 507
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
K+ D + + + W A+LSG +K+ +K ++L L PD
Sbjct: 508 KLHDRIGGQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 232/455 (50%), Gaps = 3/455 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + ++ +YG + A F +P R ++ + I + E L
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M + + ++ A ++C ++ L G ++ A++ + +D VG++++++Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K + +A AF + + ++M+ GLV G EA+ ++ M + I D V +
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 355
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G+ ACA+ G VH +I+ ++D+ V +++D+Y K L A +F+ M +
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V+W A+I+ QNG T+ EM G +PD + S L ACA + L+ G +H
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ + + ++V+DMY KCG+ A+ L D++ + ++SWN I++ + ++ E
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EA F +M++ +KPDH TFA++L ++ +E G+ ++ K ++ E + +
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQII-KQEMLDDEYISSTL 594
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
VD+ A+ G++ ++L + + + ++ W A++ G
Sbjct: 595 VDMYAKCGDMPDSLLVFEKVEKRDFVS-WNAMICG 628
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 186/375 (49%), Gaps = 7/375 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ML Y G ++ A+ F+ M D+V W+++++G G +E+VD + M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ D L+++C+ L + G+ VH +++ L +DV+ ++LVDMY K LD
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A F M N V+WGA I+G QN LEL +EMQ G S SA +CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 290 QIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L G+ +H + ++ +F + V+GT+++D+Y+K + AR F + + + + N
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SK 407
++ G G EA+ LF MI + ++ D + + + SA + + +G+ L + S
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ + + ++DL + + EA I M + ++ W A+++ + +
Sbjct: 382 FDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQNGHYDDTIL 438
Query: 468 VAKKVLK--LNPDDL 480
++L+ + PDD
Sbjct: 439 HFNEMLRFGMKPDDF 453
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 137/254 (53%), Gaps = 4/254 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ L + ++ +Y I A+KL + + + V ++N+I+ +S + E
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+++M+ ++PD TF L C +L +++G++I + ++ +D ++ S+++++
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M ++++ FEK++++D V W++MI G +G EA+ ++RM+KE + +
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 657
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ +++AC+ +G G + + + H L+ +++ +VD+ ++ A +M
Sbjct: 658 VAVLRACSHVGLFDDGCR-YFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSM 716
Query: 239 S-RINIVTWGALIS 251
+ + V W L+S
Sbjct: 717 PFQADAVIWKTLLS 730
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 36/232 (15%)
Query: 268 EMQSCGFEPDSVSLVSALLACAQIG---FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSK 324
+ Q P V+ +CAQ G + V F N + ++ MY++
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYAR 64
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYG------------------------------ 354
C +CAR +FD M RD +SWN ++ +Y
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 124
Query: 355 -IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G +E++ LF++M V PD +TFA LL + S + G L V K ++
Sbjct: 125 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV-KTGLEID 183
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ + +VD+ + +++AL M E W A ++GC ++++ G
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQNEQYVRG 234
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/509 (35%), Positives = 301/509 (59%), Gaps = 4/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y ++ ARK+F+ + + V ++N++I Y + L ++NQM+ V D
Sbjct: 163 LLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEID 222
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++ L AC L +L++G + E G + V ++++++Y KCG M+EA + F+
Sbjct: 223 GASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFD 281
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D+V W+SMING + NG + A+ +K M+ EG+ + V + ++ ACA L + +
Sbjct: 282 NMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKD 341
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ +++ L +V V+TSL+DMYAK L L+ VF SR V W AL+SG
Sbjct: 342 GRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVH 401
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N LA + L +M G E ++ + S L A + L+ +I+ Y +R F N+ +
Sbjct: 402 NKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQV 461
Query: 315 GTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
TS+ID+YSKCG A +F+ + +D+ W++IIA YG+HGHGE A+SLF QM+++
Sbjct: 462 ATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQS 521
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF S+L + SH+G+V++G Y F M+ ++ P + HY CMVDLL RAG ++E
Sbjct: 522 GVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDE 581
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++ +M PG AVW ALL C H+ +GE A+ + +L P + G + L++ +A
Sbjct: 582 AYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAA 641
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+WE+ VR+ M G++K P +S++E
Sbjct: 642 LGRWEDAENVRQRMDDIGLRKAPAHSLIE 670
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 254/481 (52%), Gaps = 29/481 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
++A Y + +ARKLF+EL RG YN +I Y K FE + ++ +M+ +D P
Sbjct: 61 LVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCP 120
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T+ +KAC L+ ++ G + + +G+ +FV +S+L +Y+ CG++ EA F
Sbjct: 121 DNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVF 180
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M+ K +V W++MING NG A+ + +M G++ D ++ ++ AC L +
Sbjct: 181 DAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELE 240
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VHG + L + V +LVDMYAK G +D A VF NM ++V+W ++I+G+
Sbjct: 241 VGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYI 299
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
NG A S L L MQ G P+SV++ LLACA + LK G+ +HG+ ++ R +
Sbjct: 300 LNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVA 359
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ TS+IDMY+KC + ++F + + + WN +++ + EA+ LF +M+
Sbjct: 360 VETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEG 419
Query: 374 VKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
V+ + +T SLL A +S L+ G VS ++ + ++D
Sbjct: 420 VEINAATCNSLLPAYGILADLQPVNNINSYLMRSG------FVSNIQVATS------LID 467
Query: 423 LLARAGEVEEALKIVDSMSTE-PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDD 479
+ ++ G +E A KI +++ + + VW +++G H + K++++ + P+D
Sbjct: 468 IYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPND 527
Query: 480 L 480
+
Sbjct: 528 V 528
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 184/365 (50%), Gaps = 9/365 (2%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKE 171
+ S ++ Y CG ++ A F++++++ + ++ MI + G EA+ + M +
Sbjct: 57 IRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSK 116
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
D +I+AC++L +G +HG ++ + V SL+ MY G ++ A
Sbjct: 117 DCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEA 176
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VF M ++V+W +I+G+ +NG A + L + +M G E D S+VS L AC +
Sbjct: 177 RKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYL 236
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L++G+ +HG + ++ +++DMY+KCG AR +FD M RD++SW +I
Sbjct: 237 KELEVGRRVHGLVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMIN 296
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---WFDLMVSKY 408
Y ++G + ALSLF M ++P+ T A +L A + +++GR W V K
Sbjct: 297 GYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGW----VMKQ 352
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
++ ++D+ A+ + + + S + + W ALLSGC ++K + +
Sbjct: 353 RLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVP-WNALLSGCVHNKLATEAIGL 411
Query: 469 AKKVL 473
KK+L
Sbjct: 412 FKKML 416
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Query: 298 KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
K +H + + ++ + + ++ Y+ CG AR LFD+++ R + +N +I Y G
Sbjct: 41 KQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKG 100
Query: 358 HGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDL-MVSKYKIQPTEK 415
EA+ +FL+M+ + PD+ T+ ++ A S LVE GR L +VSK+
Sbjct: 101 DYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFG-----S 155
Query: 416 HYACMVDLLA---RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
H + LLA GEVEEA K+ D+M E + W +++G
Sbjct: 156 HLFVLNSLLAMYMNCGEVEEARKVFDAMK-EKSVVSWNTMING 197
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 309/541 (57%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y N + AR+ F LP V+T N++++ R E +GL+ MI+ +R D
Sbjct: 291 IVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFD 350
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + AC G+++ A++ G+ D+ V +++L+LY KC + EA + F+
Sbjct: 351 VVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQ 410
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M++KD V W+++I L NG + + + M + G+ D+ +++ACA L +
Sbjct: 411 GMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY 470
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VH I+ L D V +++VDMY K G +D A + + +V+W A++SGF+
Sbjct: 471 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSL 530
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
N + + EM G +PD + + L CA + ++LGK IHG +++ D +
Sbjct: 531 NKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD-DEY 589
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++++DMY+KCG + +F++++ RD +SWN +I Y +HG G EAL +F +M +
Sbjct: 590 ISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKEN 649
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V P+H+TF ++L A SH GL ++G +F LM + YK++P +H+ACMVD+L R+ +EA
Sbjct: 650 VVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEA 709
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+K ++SM + +W LLS C + I E A VL L+PDD ++ L+SN +A
Sbjct: 710 VKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAES 769
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW +V+ R+ +++ +KK PG S +EV E+H F++ DK+H + ++ +L L EM
Sbjct: 770 GKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 829
Query: 554 R 554
+
Sbjct: 830 K 830
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 235/466 (50%), Gaps = 5/466 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y DI +A LF+ +P V ++N+++ Y ++ E + L+ +M + V PD
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF V LK+C +L +L +G ++ AV+ G DV GS+++++Y KC +++A+ F
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V W + I G V N Q ++ + M++ G+ + ++CA +
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++I+ + D V T++VD+YAK L A F + + T A++ G +
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
GL + L M D VSL ACA+ G+ +H ++ FD ++ +
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+D+Y KC A +F M+ +D +SWN IIA+ +GH ++ + F +M+ +
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD T+ S+L A + +E G D ++ K + + +VD+ + G ++EA
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVI-KSGLGSDAFVASTVVDMYCKCGIIDEAQ 507
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
K+ D + + + W A+LSG +K+ +K ++L L PD
Sbjct: 508 KLHDRIGGQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 232/455 (50%), Gaps = 3/455 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + ++ +YG + A F +P R ++ + I + E L
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M + + ++ A ++C ++ L G ++ A++ + +D VG++++++Y
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K + +A AF + + ++M+ GLV G EA+ ++ M + I D V +
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 355
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G+ ACA+ G VH +I+ ++D+ V +++D+Y K L A +F+ M +
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V+W A+I+ QNG T+ EM G +PD + S L ACA + L+ G +H
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ + + ++V+DMY KCG+ A+ L D++ + ++SWN I++ + ++ E
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EA F +M++ +KPDH TFA++L ++ +E G+ ++ K ++ E + +
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQII-KQEMLDDEYISSTL 594
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
VD+ A+ G++ ++L + + + ++ W A++ G
Sbjct: 595 VDMYAKCGDMPDSLLVFEKVEKRDFVS-WNAMICG 628
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 186/375 (49%), Gaps = 7/375 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ML Y G ++ A+ F+ M D+V W+++++G G +E+VD + M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ D L+++C+ L + G+ VH +++ L +DV+ ++LVDMY K LD
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A F M N V+WGA I+G QN LEL +EMQ G S SA +CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 290 QIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L G+ +H + ++ +F + V+GT+++D+Y+K + AR F + + + + N
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SK 407
++ G G EA+ LF MI + ++ D + + + SA + + +G+ L + S
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ + + ++DL + + EA I M + ++ W A+++ + +
Sbjct: 382 FDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQNGHYDDTIL 438
Query: 468 VAKKVLK--LNPDDL 480
++L+ + PDD
Sbjct: 439 HFNEMLRFGMKPDDF 453
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 137/254 (53%), Gaps = 4/254 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ L + ++ +Y I A+KL + + + V ++N+I+ +S + E
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+++M+ ++PD TF L C +L +++G++I + ++ +D ++ S+++++
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M ++++ FEK++++D V W++MI G +G EA+ ++RM+KE + +
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 657
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ +++AC+ +G G + + + H L+ +++ +VD+ ++ A +M
Sbjct: 658 VAVLRACSHVGLFDDGCR-YFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSM 716
Query: 239 S-RINIVTWGALIS 251
+ + V W L+S
Sbjct: 717 PFQADAVIWKTLLS 730
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 36/232 (15%)
Query: 268 EMQSCGFEPDSVSLVSALLACAQIG---FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSK 324
+ Q P V+ +CAQ G + V F + ++ MY++
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 64
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYG------------------------------ 354
C +CAR +FD M RD +SWN ++ +Y
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 124
Query: 355 -IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G +E++ LF++M V PD +TFA LL + S + G L V K ++
Sbjct: 125 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV-KTGLEID 183
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ + +VD+ + +++AL M E W A ++GC ++++ G
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGCVQNEQYVRG 234
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 317/597 (53%), Gaps = 37/597 (6%)
Query: 1 MIKTNLSAYGNSVGRIIAL--YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M T + + V R+IA D+ A +F + +N++I Y P
Sbjct: 180 MTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPI 239
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ M + V DS +F ALKAC + GE ++ ++G+ ++ V + ++
Sbjct: 240 FAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLI 299
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+ Y + G + A F++ KD+V W++MI+G + EA++ ++ M ++ +EV
Sbjct: 300 HFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEV 359
Query: 179 VMMGLIQACADLGDSRFGLSVHGY----SIRRHLNL------------------------ 210
++ ++ AC+D+G+ G VH ++R L+L
Sbjct: 360 TLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRM 419
Query: 211 ---DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
DV TS+V+ YAK G L+ A F R N V W A+I+G++QN +L+L
Sbjct: 420 ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 479
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYSKC 325
EM G P +LVS L AC Q+ L LG IH Y V + ++ L +++DMY+KC
Sbjct: 480 EMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKC 539
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +F M R+LISWN +IA Y +G ++A+++F QM +P++ TF SLL
Sbjct: 540 GSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLL 599
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+A SH GL+ EGR +FD M KY I+P HYACMVDLL R G +EEA K++ +M +P
Sbjct: 600 TACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPC 659
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
A W ALL+ C H + A +L+L+P+D GI+ L++N A ++KW +V VR
Sbjct: 660 EAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSL 719
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQG 562
M+ G+KK+PGYS++E++G F++ D+SH Q E+I Y L+ L + + +W+ G
Sbjct: 720 MKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEI-YKLECDNLSSKKL-TWVSG 774
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 310/554 (55%), Gaps = 1/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++++ + + G+ ++ +Y I+ A+ +FE R + ++NS+I +++ S
Sbjct: 512 ILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAA 571
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ +M KE + PD TF L C + L++G +I +E G DV +G++++N+
Sbjct: 572 YKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINM 631
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y++CG + +A F ++ ++++ W++MI G G+ R+A + + +M+ +G +
Sbjct: 632 YIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTF 691
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++AC G V + + LD V +L+ Y+K+G + A VF M
Sbjct: 692 SSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPN 751
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I++W +I+G+AQNGL G+ L+ +MQ G + S VS L AC+ L+ GK +
Sbjct: 752 RDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRV 811
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H V+R ++ +G ++I MY+KCG A+ +FD +++++WN +I +Y HG
Sbjct: 812 HAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLA 871
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+AL F M + +KPD STF S+LSA +HSGLV EG F + S++ + PT +HY C
Sbjct: 872 SKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+V LL RAG +EA +++ M P AVW LL C H ++ E A LKLN +
Sbjct: 932 LVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARN 991
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
++ L+SN +A +W++VA +R+ M G++K PG S +EV+ +H FI D+SH +
Sbjct: 992 PAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPET 1051
Query: 540 EDIVYVLKKLYLEM 553
+I LK+L LEM
Sbjct: 1052 AEIYEELKRLSLEM 1065
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 240/451 (53%), Gaps = 6/451 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS +I++Y D+ AR+LF +P R + ++N+II Y+R+E E + LY QM
Sbjct: 423 GNS---LISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS 479
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
E V+P TF L AC + G+ I + G ++ + ++++N+Y +CG + E
Sbjct: 480 EGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIME 539
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A FE + +D++ W+SMI G +G A + MKKEG++ D++ ++ C +
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN 599
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G +H I L LDV + +L++MY + G L A VF ++ N+++W A+
Sbjct: 600 PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAM 659
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I GFA G EL +MQ+ GF+P + S L AC L GK + + + +
Sbjct: 660 IGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGY 719
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + +G ++I YSK G + AR +FD+M +RD++SWN +IA Y +G G AL Q
Sbjct: 720 ELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQ 779
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M E V + +F S+L+A S +EEG+ +V K K+Q + A ++ + A+ G
Sbjct: 780 MQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIV-KRKMQGDVRVGAALISMYAKCG 838
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+EEA ++ D+ TE + W A+++ H
Sbjct: 839 SLEEAQEVFDNF-TEKNVVTWNAMINAYAQH 868
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 237/441 (53%), Gaps = 3/441 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG D+ SAR++F + R V +YN+++ Y++K E +GL+ QM E + PD
Sbjct: 224 LLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPD 283
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L A + L G+ I + AV G +D+ VG+++ ++V+CG + A A E
Sbjct: 284 KVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALE 343
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+D+V ++++I L +G EA + Y +M+ +G+ + + ++ AC+
Sbjct: 344 AFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGA 403
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + + DV++ SL+ MYA+ G L A +F M + ++++W A+I+G+A+
Sbjct: 404 GELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYAR 463
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G ++L +MQS G +P V+ + L AC GK IH +R N L
Sbjct: 464 REDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHL 523
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++MY +CG A+ +F+ ++RD+ISWN +IA + HG E A LFL+M + +
Sbjct: 524 ANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGL 583
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD TFAS+L + +E GR +++ + +Q ++++ R G +++A
Sbjct: 584 EPDKITFASVLVGCKNPEALELGRQ-IHMLIIESGLQLDVNLGNALINMYIRCGSLQDAY 642
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
++ S+ ++ W A++ G
Sbjct: 643 EVFHSLRHRNVMS-WTAMIGG 662
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 231/470 (49%), Gaps = 9/470 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A ++F ++P R V ++NS+I Y+++ + L+ +M P
Sbjct: 123 LINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L AC S +L+ G++I K +E GY D V +S+LN+Y KC + A F
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFS 242
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ R+D+V +++M+ E + + +M EGI D+V + L+ A
Sbjct: 243 GIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ LN D++V T+L M+ + G + A + + ++V + ALI+ AQ
Sbjct: 303 GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ 362
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
+G E +M+S G + + +S L AC+ L G+ IH + ++ +
Sbjct: 363 HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQI 422
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G S+I MY++CG AR LF+ M RDLISWN IIA Y EA+ L+ QM V
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGV 482
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQPTEKHYA-CMVDLLARAGEVEE 432
KP TF LLSA ++S +G+ D++ S K + H A ++++ R G + E
Sbjct: 483 KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIK---SNGHLANALMNMYRRCGSIME 539
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDL 480
A + + + W ++++G H + K+ ++ K L PD +
Sbjct: 540 AQNVFEGTRARD-IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKI 588
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 44/451 (9%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L N + + + ++ C L + I + VE G G D+F+ + ++N+YV
Sbjct: 69 LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KC +++A F KM R+D++ W+S+I+ G ++A ++ M+ G ++ +
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYIS 188
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ AC + +G +H I D +VQ SL++MY K L A VF + R +
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRD 248
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V++ ++ +AQ + L +M S G PD V+ ++ L A L GK IH
Sbjct: 249 VVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK 308
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
V + ++ +GT++ M+ +CG + A+ + RD++ +N +IA+ HGH EE
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEE 368
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEG------------- 397
A + QM V + +T+ S+L+A S HS + E G
Sbjct: 369 AFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLIS 428
Query: 398 -----------RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE--- 443
R F+ M + I + ++ AR + EA+K+ M +E
Sbjct: 429 MYARCGDLPRARELFNTMPKRDLIS-----WNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
PG ++ LLS C N +S G+ + + +L+
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILR 514
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/545 (35%), Positives = 314/545 (57%), Gaps = 4/545 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y D+ SAR LF+ +P R + ++N++I Y E L L+ M V
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T T + AC L D ++G +I + G+ D+ V +S+ +Y+ G EA
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M+RKD+V W++MI+G +N P +A+D Y+ M ++ + DE+ + ++ ACA LGD
Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD 413
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H +I+ L V V +L++MY+K +D A +F N+ R N+++W ++I+G
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
N L L +M+ +P++++L +AL ACA+IG L GK IH + +R +
Sbjct: 474 LRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +++DMY +CG + A + F+ Q +D+ SWN+++ Y G G + LF +M++
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V+PD TF SLL S S +V +G +F M Y + P KHYAC+VDLL RAGE++
Sbjct: 592 SRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQ 650
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA K + M P AVW ALL+ C H K +GE A+ + +L+ +G + L+ N +A
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYA 710
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW EVA VR+ M+++G+ G S VEV G++HAF+ +DK H Q ++I VL+ Y
Sbjct: 711 DCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYE 770
Query: 552 EMRAI 556
+M +
Sbjct: 771 KMSEV 775
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 253/488 (51%), Gaps = 9/488 (1%)
Query: 4 TNLSAYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+++S+ G +G +A++ ++V A +F ++ R + ++N ++ Y+++ E +
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 63 LYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
LY++M+ V+PD TF L+ C + DL G+E+ V GY D+ V ++++ +Y
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
VKCG + A + F++M R+D++ W++MI+G NG E ++ + M+ +D D + +
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I AC LGD R G +H Y I +D+ V SL MY G A +F M R
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+IV+W +ISG+ N L ++ M +PD +++ + L ACA +G L G +H
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 302 GYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ R +++ ++I+MYSKC A +F + +++ISW IIA ++
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL +FL+ ++ ++P+ T + L+A + G + G+ V + + + +
Sbjct: 482 EAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKE-IHAHVLRTGVGLDDFLPNAL 539
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
+D+ R G + A +S + + W LL+G + S+ ++ +++K + PD
Sbjct: 540 LDMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 479 DLGIHALV 486
++ +L+
Sbjct: 598 EITFISLL 605
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 201/403 (49%), Gaps = 12/403 (2%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + L N M + V D F ++ C + G +++ A+ V +G++ L
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADE 177
++V+ G + +A F KM ++L W+ ++ G G EA+ Y RM G+ D
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++ C + D G VH + +R LD+ V +L+ MY K G + A +F
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M R +I++W A+ISG+ +NG+ LEL M+ +PD ++L S + AC +G +LG
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IH Y + F ++ + S+ MY G A LF +M+ +D++SW +I+ Y +
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
++A+ + M + VKPD T A++LSA + G ++ G + + K I+
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG-----VELHKLAIKARLIS 431
Query: 417 YAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
Y ++++ ++ +++AL I ++ + ++ W ++++G
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAG 473
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 145/311 (46%), Gaps = 8/311 (2%)
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++GL NG+ EA+ M++ + DE V + L++ C G V+ ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+L V++ + + M+ + G+L A +VF MS N+ +W L+ G+A+ G + L
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 269 MQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M G +PD + L C I L GK +H + VR ++ ++ + ++I MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD+M RD+ISWN +I+ Y +G E L LF M V PD T S++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEP 444
A G GR D+ C + + AG EA K+ M +
Sbjct: 306 ACELLGDRRLGR---DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 445 GLAVWVALLSG 455
+ W ++SG
Sbjct: 363 -IVSWTTMISG 372
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L +Y +I +Y I A +F +P + V ++ SII FE L
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
QM K ++P++ T T AL AC + L G+EI + G G D F+ +++L++Y
Sbjct: 485 IFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
V+CG+MN A F Q+KD+ W+ ++ G GQ V+ + RM K + DE+ +
Sbjct: 544 VRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 602
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+ C+ R GL + ++K +VD+ + G L A + M
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 242 -NIVTWGALISG 252
+ WGAL++
Sbjct: 663 PDPAVWGALLNA 674
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 300/522 (57%), Gaps = 1/522 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + SAR+ F+ + + + ++ ++ Y+ + + L L+ +M P+
Sbjct: 82 LIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPN 141
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKAC+ L +G+ + ++ Y D++VG +L+LY K G N+ + FE
Sbjct: 142 HFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFE 201
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + D++ WS MI+ + Q REAV+ + +M++ + ++ ++Q+CA + + +
Sbjct: 202 EMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQL 261
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + ++ L+ +V V +L+D+YAK G LD + +F + N VTW +I G+ Q
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQ 321
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G L L M C + V+ S L ACA + ++LG IH +++ +D ++V+
Sbjct: 322 SGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVV 381
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++IDMY+KCG AR +FD + RD ISWN +I+ Y +HG EAL F M ET
Sbjct: 382 GNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETEC 441
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ TF S+LSA S++GL++ G+ +F MV Y I+P +HY CMV LL R+G +++A+
Sbjct: 442 VPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAV 501
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+++ + EP + VW ALL C H +G A+++L+++P D H L+SN +A +
Sbjct: 502 KLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTR 561
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+W VA VRK M+ G+KK PG S +E G +H F + D SH
Sbjct: 562 RWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSH 603
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 224/425 (52%), Gaps = 3/425 (0%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
+P R ++ ++I Y + EV+ L++++ +E + FT LK VS+ ++
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+ +LG+ ++ FVG+++++ Y CG +N A AF+ + KD+V W+ M+ N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
+ ++++ + M+ G + + G+++AC L G SVHG ++ +D+ V
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
L+D+Y K G + VF+ M + +++ W +IS +AQ+ + +EL +M+
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ + S L +CA I L+LGK +H + ++ D N+ + +++D+Y+KCG + L
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F ++ +R+ ++WN +I Y G G++ALSL+ M+E V+ T++S+L A + +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
E G L + + A ++D+ A+ G ++ A + D +S ++ W A++S
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNA-LIDMYAKCGSIKNARLVFDMLSERDEIS-WNAMIS 418
Query: 455 GCHNH 459
G H
Sbjct: 419 GYSMH 423
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 309/541 (57%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y N + AR+ F LP V+T N++++ R E +GL+ MI+ +R D
Sbjct: 333 IVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFD 392
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + AC G+++ A++ G+ D+ V +++L+LY KC + EA + F+
Sbjct: 393 VVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQ 452
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M++KD V W+++I L NG + + + M + G+ D+ +++ACA L +
Sbjct: 453 GMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY 512
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VH I+ L D V +++VDMY K G +D A + + +V+W A++SGF+
Sbjct: 513 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSL 572
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
N + + EM G +PD + + L CA + ++LGK IHG +++ D +
Sbjct: 573 NKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD-DEY 631
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++++DMY+KCG + +F++++ RD +SWN +I Y +HG G EAL +F +M +
Sbjct: 632 ISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKEN 691
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V P+H+TF ++L A SH GL ++G +F LM + YK++P +H+ACMVD+L R+ +EA
Sbjct: 692 VVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEA 751
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+K ++SM + +W LLS C + I E A VL L+PDD ++ L+SN +A
Sbjct: 752 VKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAES 811
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW +V+ R+ +++ +KK PG S +EV E+H F++ DK+H + ++ +L L EM
Sbjct: 812 GKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 871
Query: 554 R 554
+
Sbjct: 872 K 872
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 235/466 (50%), Gaps = 5/466 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y DI +A LF+ +P V ++N+++ Y ++ E + L+ +M + V PD
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF V LK+C +L +L +G ++ AV+ G DV GS+++++Y KC +++A+ F
Sbjct: 191 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 250
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V W + I G V N Q ++ + M++ G+ + ++CA +
Sbjct: 251 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++I+ + D V T++VD+YAK L A F + + T A++ G +
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
GL + L M D VSL ACA+ G+ +H ++ FD ++ +
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+D+Y KC A +F M+ +D +SWN IIA+ +GH ++ + F +M+ +
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD T+ S+L A + +E G D ++ K + + +VD+ + G ++EA
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVI-KSGLGSDAFVASTVVDMYCKCGIIDEAQ 549
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
K+ D + + + W A+LSG +K+ +K ++L L PD
Sbjct: 550 KLHDRIGGQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 594
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 232/455 (50%), Gaps = 3/455 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + ++ +YG + A F +P R ++ + I + E L
Sbjct: 218 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 277
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M + + ++ A ++C ++ L G ++ A++ + +D VG++++++Y
Sbjct: 278 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 337
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K + +A AF + + ++M+ GLV G EA+ ++ M + I D V +
Sbjct: 338 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 397
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G+ ACA+ G VH +I+ ++D+ V +++D+Y K L A +F+ M +
Sbjct: 398 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 457
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V+W A+I+ QNG T+ EM G +PD + S L ACA + L+ G +H
Sbjct: 458 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 517
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ + + ++V+DMY KCG+ A+ L D++ + ++SWN I++ + ++ E
Sbjct: 518 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 577
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EA F +M++ +KPDH TFA++L ++ +E G+ ++ K ++ E + +
Sbjct: 578 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQII-KQEMLDDEYISSTL 636
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
VD+ A+ G++ ++L + + + ++ W A++ G
Sbjct: 637 VDMYAKCGDMPDSLLVFEKVEKRDFVS-WNAMICG 670
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 149/283 (52%), Gaps = 1/283 (0%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ML Y G ++ A+ F+ M D+V W+++++G G +E+VD + M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ D L+++C+ L + G+ VH +++ L +DV+ ++LVDMY K LD
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A F M N V+WGA I+G QN LEL +EMQ G S SA +CA
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 290 QIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L G+ +H + ++ +F + V+GT+++D+Y+K + AR F + + + + N
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
++ G G EA+ LF MI + ++ D + + + SA + +
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET 406
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 137/254 (53%), Gaps = 4/254 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ L + ++ +Y I A+KL + + + V ++N+I+ +S + E
Sbjct: 520 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 579
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+++M+ ++PD TF L C +L +++G++I + ++ +D ++ S+++++
Sbjct: 580 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 639
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M ++++ FEK++++D V W++MI G +G EA+ ++RM+KE + +
Sbjct: 640 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 699
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ +++AC+ +G G + + + H L+ +++ +VD+ ++ A +M
Sbjct: 700 VAVLRACSHVGLFDDGCR-YFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSM 758
Query: 239 S-RINIVTWGALIS 251
+ + V W L+S
Sbjct: 759 PFQADAVIWKTLLS 772
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 36/232 (15%)
Query: 268 EMQSCGFEPDSVSLVSALLACAQIG---FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSK 324
+ Q P V+ +CAQ G + V F + ++ MY++
Sbjct: 47 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 106
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYG------------------------------ 354
C +CAR +FD M RD +SWN ++ +Y
Sbjct: 107 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 166
Query: 355 -IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G +E++ LF++M V PD +TFA LL + S + G L V K ++
Sbjct: 167 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV-KTGLEID 225
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ + +VD+ + +++AL M E W A ++GC ++++ G
Sbjct: 226 VRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQNEQYVRG 276
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/551 (35%), Positives = 315/551 (57%), Gaps = 10/551 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR LF+++P R + ++N++I + + + L + ++M E ++ + T L C
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D+ I ++ G D+FV ++++N+Y K G + +A AF++M D+V W+S+
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH- 207
I N P A + +M+ G D + ++ L A D + SVHG+ +RR
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L DV + ++VDMYAK G LD A VF+ + ++++W LI+G+AQNGLA +E+
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 268 EMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
M+ C P+ + VS L A A +G L+ G IHG ++ ++ + T +ID+Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +LF Q+ ++WN II+ +GIHGH E+ L LF +M++ VKPDH TF SLL
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA SHSG VEEG++ F LM +Y I+P+ KHY CMVDLL RAG +E A + M +P
Sbjct: 629 SACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPD 687
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
++W ALL C H +G+ + ++ +++ ++G + L+SN +A KWE V VR
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI------SSW 559
R+ G+KK PG+S +EVN ++ F ++SH + ++I L+ L +M+++ S
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFV 807
Query: 560 LQGHMEEHEEH 570
LQ E+ +EH
Sbjct: 808 LQDVEEDEKEH 818
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 271/500 (54%), Gaps = 31/500 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
R++ LY D+ +R F+++P + V T+NS+I AY E +G + Q++ ++R
Sbjct: 156 RLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIR 215
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF LKAC +L+D G I A +LG+ +VFV +S++++Y + G A
Sbjct: 216 PDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSL 272
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D+ W++MI+GL+ NG +A+D M+ EGI + V ++ ++ C LGD
Sbjct: 273 FDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDI 332
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ +H Y I+ L D+ V +L++MYAK G+L+ A F+ M ++V+W ++I+ +
Sbjct: 333 STAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAY 392
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFN 311
QN + ++MQ GF+PD ++LVS AQ K +S+HG+ +RR +
Sbjct: 393 EQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMED 452
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+V+G +V+DMY+K G+ A +F+ + +D+ISWN +I Y +G EA+ ++ M E
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 512
Query: 372 TM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-----ACMVDLLA 425
+ P+ T+ S+L A +H G +++G M ++ T H C++D+
Sbjct: 513 CKEIIPNQGTWVSILPAYAHVGALQQG------MRIHGRVIKTNLHLDVFVATCLIDVYG 566
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSI---GEKVAKKVLKLNPDDL 480
+ G + +A+ + + E + W A++S G H H + ++ GE + + V PD +
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEMLDEGV---KPDHV 622
Query: 481 GIHALVS----NFFAMEQKW 496
+L+S + F E KW
Sbjct: 623 TFVSLLSACSHSGFVEEGKW 642
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 203/412 (49%), Gaps = 20/412 (4%)
Query: 48 IIAYSRKESPFEVLGLYNQM--IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL 105
+ + +R F GL NQ I + DSST T K +L+ V
Sbjct: 98 LFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALL------------VVA 145
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA- 164
G +F+ + ++NLY G ++ + F+++ +KD+ W+SMI+ V NG EA+
Sbjct: 146 GKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCF 205
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
Y+ + I D +++AC L D R +H ++ + +V V SL+ MY++
Sbjct: 206 YQLLLVSEIRPDFYTFPPVLKACGTLVDGR---RIHCWAFKLGFQWNVFVAASLIHMYSR 262
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G +A +F +M ++ +W A+ISG QNG A L++L EM+ G + + V++VS
Sbjct: 263 FGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSI 322
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L C Q+G + IH Y ++ +F+L + ++I+MY+K G AR F QM D+
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDV 382
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SWN IIA+Y + A F++M +PD T SL S ++ S + R
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + + +VD+ A+ G ++ A K+ + + + ++ W L++G
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVIS-WNTLITG 493
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKTNL +I +YG +V A LF ++P T+N+II + +
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT 605
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M+ E V+PD TF L AC ++ G+ +R E G + M++L
Sbjct: 606 LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDL 665
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQ 157
+ G + A + M + D W +++ +G
Sbjct: 666 LGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGN 703
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 315/541 (58%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y DIV+ARK+F+ + + ++N++I + L L+ M++ +V+P+
Sbjct: 238 LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T A L ++ +E+ AV+ G+ DV +S++ +Y G+M +A F
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS 357
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ KD + W++MI+G NG P +A++ Y M+ + D+V + + ACA LG
Sbjct: 358 RMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDV 417
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H + + V V +L++MYAK+ H+D A VFK M+ ++V+W ++I+GF
Sbjct: 418 GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N + L M +P+SV+ ++AL ACA G L+ GK IH Y +R +
Sbjct: 478 NHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 536
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++D+Y KCG S A A F +D++SWN++++ + HG G+ ALSLF QM+E
Sbjct: 537 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LL A S +G+V +G F +M K+ I P KHYACMVDLL+R G++ EA
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ M +P AVW ALL+GC H+ +GE AK +L+L P+D+ H L+ + +
Sbjct: 657 NLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAG 716
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +VA VRKTMR+ G+++ G S VEV G HAF+ +D+SH Q ++I VL +Y M+
Sbjct: 717 KWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 776
Query: 555 A 555
A
Sbjct: 777 A 777
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 246/498 (49%), Gaps = 20/498 (4%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ ++ +G +I A ++F ++P R V ++N ++ Y + E L LY +M+
Sbjct: 134 GNAMLSMLVRFG---EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD TF L+ C + D +MG E+ + G+G++V V ++++ +Y KCG +
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M D + W++MI G N + ++ + M + + + + + + A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + F +HG++++R +DV SL+ MY G + A +F M + ++W A+
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NG LE+ M+ PD V++ SAL ACA +G L +G +H + F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ ++++MY+K A +F M +D++SW+ +IA + + EAL F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLL 424
M+ VKP+ TF + LSA + +G + G+ Y + P ++DL
Sbjct: 491 ML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLDLY 544
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGI 482
+ G+ A S+ +E + W +LSG H I + +++++ +PD++
Sbjct: 545 VKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF 603
Query: 483 HALV---SNFFAMEQKWE 497
AL+ S + Q WE
Sbjct: 604 VALLCACSRAGMVIQGWE 621
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 202/404 (50%), Gaps = 30/404 (7%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-------------YGNDVFVGSSMLNL 120
PD + + C WR+AV+ G +G + +G++ML++
Sbjct: 94 PDEGAYVALFRLCE-----------WRRAVDAGMRACARADAEHPSFG--LRLGNAMLSM 140
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
V+ G++ A F KM +D+ W+ M+ G G EA+D Y RM G+ D
Sbjct: 141 LVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTF 200
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++ C + D R G VH + +R +V V +LV MYAK G + A VF M+
Sbjct: 201 PCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV 260
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ ++W A+I+G +N + LEL + M +P+ +++ S +A + + K +
Sbjct: 261 TDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM 320
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ V+R F ++ S+I MY+ G A +F +M+++D +SW +I+ Y +G
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++AL ++ M V PD T AS L+A + G ++ G +L +K I+ A
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA- 439
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKF 462
++++ A++ +++A+++ M+ E + W ++++G C NH+ F
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSF 482
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 299/544 (54%), Gaps = 7/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y A +F +P R V +N+++ Y+ + + ++++D P+
Sbjct: 170 LVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPN 228
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND----VFVGSSMLNLYVKCGKMNEAM 131
+ST L L G + +V +D V VG+++L++Y KCG + A
Sbjct: 229 ASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYAS 288
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADL 190
FE M ++ V WS+++ G V G+ EA +K M +G+ + ++ACA+L
Sbjct: 289 RVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANL 348
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G +H + L+ D+ SL+ MYAK G +D A+ +F M + V++ AL+
Sbjct: 349 SDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALV 408
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFD 309
SG+ QNG A + +MQ+C +PD ++VS + AC+ + L+ GK HG VR
Sbjct: 409 SGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIA 468
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ ++IDMY+KCG +R +FD M +RD++SWN +IA YGIHG G+EA +LFL M
Sbjct: 469 SETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDM 528
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+PD TF L+SA SHSGLV EG+ WF +M KY I P +HY MVDLLAR G
Sbjct: 529 KHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGF 588
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA + + M + + VW ALL C HK +G++V+ + +L P+ G L+SN
Sbjct: 589 LDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNI 648
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
F+ +++E A VR ++ G KK PG S +E+NG LHAFI D+SH Q +I L +
Sbjct: 649 FSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNI 708
Query: 550 YLEM 553
+++
Sbjct: 709 LVDI 712
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 240/473 (50%), Gaps = 15/473 (3%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ AR LF+++P G+ YN++I AYS + + + + +P++ TF LK
Sbjct: 78 DLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLK 137
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC +L+DL+ + A G D+FV ++++++Y KC A F +M +D+V
Sbjct: 138 ACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVA 197
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W++M+ G +G+ + + M+ + + ++ L+ A G G +VH YS+
Sbjct: 198 WNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAYSV 256
Query: 205 RR---HLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
R H + D V V T+L+DMYAK GHL AS VF+ M+ N VTW AL+ GF G
Sbjct: 257 RACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML 316
Query: 261 STLELLMEMQS---CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L +M + C P SV+ SAL ACA + L LGK +H + +L G
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S++ MY+K G+ A LFDQM +D +S++ +++ Y +G +EA +F +M V+P
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQP 434
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D +T SL+ A SH ++ G+ ++ + T A ++D+ A+ G ++ + +I
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNA-LIDMYAKCGRIDLSRQI 493
Query: 437 VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
D M + W +++ G H K + + K PDD+ L+S
Sbjct: 494 FDVMPAR-DIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLIS 545
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 130/255 (50%), Gaps = 14/255 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ T+L+A GNS ++++Y I A LF+++ ++ +Y++++ Y + E
Sbjct: 366 LHTDLTA-GNS---LLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAF 421
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M +V+PD +T + AC L L+ G+ + G ++ + ++++++Y
Sbjct: 422 RVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMY 481
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG+++ + F+ M +D+V W++MI G +G +EA + MK + + D+V +
Sbjct: 482 AKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFI 541
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
LI AC+ G F + H Y I + + +VD+ A+ G LD A +
Sbjct: 542 CLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI----GMVDLLARGGFLDEAYQFIQ 597
Query: 237 NMS-RINIVTWGALI 250
M + ++ WGAL+
Sbjct: 598 GMPLKADVRVWGALL 612
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G L LA H+F + I + ALI ++ G A + + +P++ +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L AC+ + L+ +++H + R +L + T+++D+Y+KC A +F +M +RD+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
++WN ++A Y +HG + ++ L M + P+ ST +LL L+ G + +GR
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGR----- 249
Query: 404 MVSKYKIQPTEKH--------YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
V Y ++ H ++D+ A+ G + A ++ ++M+ + W AL+ G
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEV-TWSALVGG 308
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 24/150 (16%)
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG S AR LFDQ+ + + +N +I +Y + G + +P++ TF +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 385 LSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
L A S H G + DL VS +VD+ A+ A
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHA-DLFVS-----------TALVDVYAKCASFRHA 183
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
+ M +A W A+L+G H K+S
Sbjct: 184 ATVFRRMPARDVVA-WNAMLAGYALHGKYS 212
>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 314/545 (57%), Gaps = 4/545 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + + A+ LF+++ R + ++N++I Y+ + E+L L +M + +RPD
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +L ++ DL+MG + + V+ G+ D+ + ++++ +Y+KCGK + E
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD+VCW+ MI+GL+ G+ +A+ + M + G D + ++ +CA LG
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHGY +R LD SL+ MYAK GHLD + +F+ M+ ++V+W A+ISG+AQ
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQ 424
Query: 256 NGLAGSTLELLMEMQSCGFEP-DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
N L L EM+ + DS ++VS L AC+ G L +GK IH +R F L
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
T+++DMYSKCG A+ FD + +D++SW ++IA YG HG G+ AL ++ + + +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+H F ++LS+ SH+G+V++G F MV + ++P +H AC+VDLL RA +E+A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
K T P + V +L C + K + + + + +++L P D G + + + FA
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++W++V+ MR G+KK+PG+S +E+NG+ F M SH+ +D V +LK L EM
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREM 722
Query: 554 RAISS 558
S
Sbjct: 723 MQFGS 727
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 246/477 (51%), Gaps = 9/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARK+FEE+ R V + ++I YSR E L N+M + ++P
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L + + L+ + AV G+ D+ V +SMLNLY KC + +A F+
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDF---AVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+++D+V W++MI+G G E + RM+ +G+ D+ + + D
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ ++D+ ++T+L+ MY K G + + V + + ++V W +ISG +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G A L + EM G + S ++ S + +CAQ+G LG S+HGY +R + +
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETM 373
S+I MY+KCG + +F++M RDL+SWN II+ Y + +AL LF +M +T+
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ D T SLL A S +G + G+ +++ + I+P +VD+ ++ G +E A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAA 502
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
+ DS+S + + W L++G H K I ++ + L + P+ + A++S+
Sbjct: 503 QRCFDSISWKD-VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 213/419 (50%), Gaps = 6/419 (1%)
Query: 38 LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
L +NS I S +VL ++ M+ + PD+ TF LKAC SL L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I ++ + G+ +D ++ SS++NLY K G + A FE+M+ +D+V W++MI G
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA M+ +GI V ++ ++ ++ + +H +++ + D+ V S
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNS 184
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
++++Y K H+ A +F M + ++V+W +ISG+A G L+LL M+ G PD
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
+ ++L + L++G+ +H V+ FD ++ L T++I MY KCG + + +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+ ++D++ W V+I+ G E+AL +F +M+++ AS++++ + G +
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
G ++ ++ ++ + A+ G ++++L I + M+ E L W A++SG
Sbjct: 365 GASVHGYVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 315/541 (58%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y DIV+ARK+F+ + + ++N++I + L L+ M++ +V+P+
Sbjct: 238 LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T A L ++ +E+ AV+ G+ DV +S++ +Y G+M +A F
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS 357
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ KD + W++MI+G NG P +A++ Y M+ + D+V + + ACA LG
Sbjct: 358 RMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDV 417
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H + + V V +L++MYAK+ H+D A VFK M+ ++V+W ++I+GF
Sbjct: 418 GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N + L M +P+SV+ ++AL ACA G L+ GK IH Y +R +
Sbjct: 478 NHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 536
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++D+Y KCG S A A F +D++SWN++++ + HG G+ ALSLF QM+E
Sbjct: 537 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LL A S +G+V +G F +M K+ I P KHYACMVDLL+R G++ EA
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ M +P AVW ALL+GC H+ +GE AK +L+L P+D+ H L+ + +
Sbjct: 657 NLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAG 716
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +VA VRKTMR+ G+++ G S VEV G HAF+ +D+SH Q ++I VL +Y M+
Sbjct: 717 KWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 776
Query: 555 A 555
A
Sbjct: 777 A 777
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 246/498 (49%), Gaps = 20/498 (4%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ ++ +G +I A ++F ++P R V ++N ++ Y + E L LY +M+
Sbjct: 134 GNAMLSMLVRFG---EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD TF L+ C + D +MG E+ + G+G++V V ++++ +Y KCG +
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M D + W++MI G N + ++ + M + + + + + + A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + F +HG++++R +DV SL+ MY G + A +F M + ++W A+
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NG LE+ M+ PD V++ SAL ACA +G L +G +H + F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ ++++MY+K A +F M +D++SW+ +IA + + EAL F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLL 424
M+ VKP+ TF + LSA + +G + G+ Y + P ++DL
Sbjct: 491 ML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPN-----ALLDLY 544
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGI 482
+ G+ A S+ +E + W +LSG H I + +++++ +PD++
Sbjct: 545 VKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF 603
Query: 483 HALV---SNFFAMEQKWE 497
AL+ S + Q WE
Sbjct: 604 VALLCACSRAGMVIQGWE 621
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 200/402 (49%), Gaps = 26/402 (6%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-----------GNDVFVGSSMLNLYV 122
PD + + C WR+AV+ G + +G++ML++ V
Sbjct: 94 PDEGAYVALFRLCE-----------WRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLV 142
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ G++ A F KM +D+ W+ M+ G G EA+D Y RM G+ D
Sbjct: 143 RFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPC 202
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+++ C + D R G VH + +R +V V +LV MYAK G + A VF M+ +
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W A+I+G +N + LEL + M +P+ +++ S +A + + K +HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ V+R F ++ S+I MY+ G A +F +M+++D +SW +I+ Y +G ++
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL ++ M V PD T AS L+A + G ++ G +L +K I+ A ++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA-LL 441
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKF 462
++ A++ +++A+++ M+ E + W ++++G C NH+ F
Sbjct: 442 EMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSF 482
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 296/510 (58%), Gaps = 6/510 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I S+ K+FE++ LR V + S+I Y + + E L L+N+M + V +
Sbjct: 194 LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGN 253
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ + AC L L G+ ++ G + +S+L++YVKCG ++ A F
Sbjct: 254 EYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 313
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ DLV W++MI G NG EA+ +++M GI + V + ++ C +G+
Sbjct: 314 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLEL 373
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+HG SI+ + D V +LV MYAK A +VF+ S +IV W ++ISGF+Q
Sbjct: 374 GRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 432
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF----N 311
NG L L M + P+ V++ S ACA +G L +G S+H Y+V+ F +
Sbjct: 433 NGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVK-LGFLASSS 491
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +GT+++D Y+KCG AR +FD ++ ++ I+W+ +I YG G + +L LF +M++
Sbjct: 492 VHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLK 551
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KP+ STF S+LSA SH+G+V EG+ +F M Y P+ KHY CMVD+LARAGE+E
Sbjct: 552 KQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 611
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+AL I++ M +P + + A L GC H +F +GE V KK+L L+PDD + LVSN +A
Sbjct: 612 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 671
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+ +W + VR M++ G+ K+ G+S++E
Sbjct: 672 SDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 5/443 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++LYG AR +F+++P + I+ Y FEV+ Y+ ++K
Sbjct: 93 KLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGY 152
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D F+ ALKAC + DL G++I + V++ + N V G +L++Y KCG++ +
Sbjct: 153 DDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG--LLDMYAKCGEIKSSYKV 210
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE + +++VCW+SMI G V N E + + RM++ + +E L+ AC L
Sbjct: 211 FEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRAL 270
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G HG I+ + L + TSL+DMY K G + A VF S +++V W A+I G+
Sbjct: 271 HQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 330
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
NG L L +M G +P+ V++ S L C +G L+LG+SIHG +++ ++
Sbjct: 331 THNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN 390
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++ MY+KC A+ +F+ +D+++WN II+ + +G EAL LF +M
Sbjct: 391 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTES 450
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEE 432
V P+ T ASL SA + G + G V + + H ++D A+ G+ E
Sbjct: 451 VMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAES 510
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A I D++ E W A++ G
Sbjct: 511 ARLIFDTIE-EKNTITWSAMIGG 532
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 200/404 (49%), Gaps = 12/404 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ + V ++ +Y DI +AR++F E + + ++I+ Y+ S E
Sbjct: 280 LIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 339
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M ++P+ T L C + +L++G I ++++G D V ++++++
Sbjct: 340 LSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHM 398
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + +A FE KD+V W+S+I+G NG EA+ + RM E + + V +
Sbjct: 399 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTV 458
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
L ACA LG G S+H YS++ + V V T+L+D YAK G + A +F +
Sbjct: 459 ASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTI 518
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N +TW A+I G+ + G +LEL EM +P+ + S L AC+ G + GK
Sbjct: 519 EEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGK 578
Query: 299 SIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGI 355
+ ++F T ++DM ++ G A + ++M + D+ + + G+
Sbjct: 579 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 638
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
H + + +M++ + PD +++ L+S L S +GR+
Sbjct: 639 HSRFDLGEIVIKKMLD--LHPDDASYYVLVSNLYAS----DGRW 676
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 191/386 (49%), Gaps = 9/386 (2%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN----DVFVGSSMLNLYVKCGKMNEA 130
+SS A + C L+ + R+A + GN D+ + + +++LY G +A
Sbjct: 48 ESSLNYAASRPCFLLLSKCTNIDSLRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDA 107
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
+ F+++ D W ++ N + E + Y + K G D++V ++AC ++
Sbjct: 108 RLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEV 167
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G +H I + + D V T L+DMYAK G + + VF++++ N+V W ++I
Sbjct: 168 QDLDNGKKIHC-QIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMI 226
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+G+ +N L L L M+ + + + ++AC ++ L GK HG ++ +
Sbjct: 227 AGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIE 286
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ L TS++DMY KCG S AR +F++ DL+ W +I Y +G EALSLF +M
Sbjct: 287 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 346
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+KP+ T AS+LS G +E GR L + K I T A +V + A+ +
Sbjct: 347 SGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSI-KVGIWDTNVANA-LVHMYAKCYQ 404
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
+A K V M +E + W +++SG
Sbjct: 405 NRDA-KYVFEMESEKDIVAWNSIISG 429
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 9/298 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ C ++ R HG L D+ + T LV +Y G+ A VF + +
Sbjct: 62 LLSKCTNIDSLR---QAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W ++ + N + ++ + GF D + AL AC ++ L GK IH
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 303 YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
V+ F+ V+ T ++DMY+KCG + +F+ + R+++ W +IA Y + EE
Sbjct: 179 QIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEG 238
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L LF +M E V + T+ +L+ A + + +G+ WF + K I+ + ++D
Sbjct: 239 LVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGK-WFHGCLIKSGIELSSCLVTSLLD 297
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHN---HKKFSIGEKVAKKVLKLN 476
+ + G++ A ++ + S L +W A++ G HN ++ S+ +K++ +K N
Sbjct: 298 MYVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPN 354
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 302/543 (55%), Gaps = 24/543 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI--------KEDVRPDSSTFT 80
A +F ++P+R V +N+++ Y+ G+Y+ I + +RP++ST
Sbjct: 153 AANVFAKMPMRDVVAWNAMLAGYANH-------GMYHHAIAHLLDMQDRGGLRPNASTLV 205
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGND---VFVGSSMLNLYVKCGKMNEAMVAFEKM 137
L L G + + + V +G+++L++Y KC + A F M
Sbjct: 206 SLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGM 265
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG---IDADEVVMMGLIQACADLGDSR 194
++ V WS++I G V + EA + +K M EG + A V ++ CA L D R
Sbjct: 266 TVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVA--SALRVCASLADLR 323
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H + ++ D+ SL+ MYAK G ++ A+ +F ++ + +++GAL+SG+
Sbjct: 324 MGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYV 383
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLV 313
QNG A + +MQ+C +PD ++VS + AC+ + L+ G+ HG + R
Sbjct: 384 QNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETS 443
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+IDMY+KCG +R +FD+M +RD++SWN +IA YGIHG G+EA +LFL M
Sbjct: 444 ICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQG 503
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+PD TF L++A SHSGLV EG++WFD M KY I P +HY CMVDLLAR G ++EA
Sbjct: 504 FEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEA 563
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + SM + + VW ALL C HK +G++V++ + KL P+ G L+SN F+
Sbjct: 564 YQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAA 623
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+++E A VR + G KK PG S +E+NG LHAF+ D+SH DI + L + +++
Sbjct: 624 GRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDI 683
Query: 554 RAI 556
+ +
Sbjct: 684 KKL 686
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 236/474 (49%), Gaps = 10/474 (2%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
+ + AR++F+ +P YN++I AYS + + LY M+ V P+ TF
Sbjct: 45 ARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPF 104
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
LKAC +L DL G I A +G D+FV +++++LY++C + A F KM +D
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+V W++M+ G +G A+ M+ + G+ + ++ L+ A G G SVH
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224
Query: 201 GYSIRRHLNLD---VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
Y +R +L+ + V + T+L+DMYAK HL A VF M+ N VTW ALI GF
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCD 284
Query: 258 LAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
L +M G + S+ SAL CA + L++G +H + +L G
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
S++ MY+K G+ + A LFD++ +D IS+ +++ Y +G EEA +F +M V+
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD +T SL+ A SH ++ GR ++ + T + ++D+ A+ G ++ + +
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNS-LIDMYAKCGRIDLSRQ 463
Query: 436 IVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
+ D M + W +++ G H K + ++ K PDD+ L++
Sbjct: 464 VFDKMPAR-DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIA 516
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 180/383 (46%), Gaps = 49/383 (12%)
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
L ++ G++ A F+++ D ++++I + G A+D Y+ M + ++
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++AC+ L D G ++H ++ L+ D+ V T+L+D+Y + A++VF
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKL 296
M ++V W A+++G+A +G+ + L++MQ G P++ +LVS L AQ G L
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 297 GKSIHGYTVRRF-DFN---LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G S+H Y +R + D N +++GT+++DMY+KC A +F M R+ ++W+ +I
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279
Query: 353 YGIHGHGEEALSLFLQMI------------------------------------ETMVKP 376
+ + EA +LF M+ ++ +
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA 339
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D + SLLS + +GL+ E FD + K I Y ++ + G+ EEA +
Sbjct: 340 DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-----YGALLSGYVQNGKAEEAFLV 394
Query: 437 VDSM---STEPGLAVWVALLSGC 456
M + +P +A V+L+ C
Sbjct: 395 FKKMQACNVQPDIATMVSLIPAC 417
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 14/255 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I +L+A GNS ++++Y I A LF+E+ ++ +Y +++ Y + E
Sbjct: 337 IHADLTA-GNS---LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAF 392
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M +V+PD +T + AC L L+ G + G + + +S++++Y
Sbjct: 393 LVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMY 452
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG+++ + F+KM +D+V W++MI G +G +EA + MK +G + D+V +
Sbjct: 453 AKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFI 512
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
LI AC+ G F H Y I + + +VD+ A+ G LD A +
Sbjct: 513 CLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGFLDEAYQFIQ 568
Query: 237 NMS-RINIVTWGALI 250
+M + ++ WGAL+
Sbjct: 569 SMPLKADVRVWGALL 583
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 322/612 (52%), Gaps = 71/612 (11%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIII------------------------- 49
R+I +YG + + ARKLF+ +P R T+NS+I
Sbjct: 55 RLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCS 114
Query: 50 ------AYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+++ + E L + +M +ED + +F AL AC LMDL MG ++
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ Y DV++GS+++++Y KCG + A F M ++LV W+S+I NG EA++
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMY 222
+ RM G++ DEV + ++ ACA L + GL +H ++ + D+ + +LVDMY
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 223 AKTGHLDLASHVFKNMS-------------------------------RINIVTWGALIS 251
AK ++ A VF MS + N+V+W ALI+
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA 354
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+ QNG L L ++ P + + L ACA + L LG+ H + +++ F+F
Sbjct: 355 GYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEF 414
Query: 311 ------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
++ +G S+IDMY KCG +F++M+ RD +SWN II Y +G+G EAL
Sbjct: 415 QSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQ 474
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
+F +M+ KPDH T +L A SH+GLVEEGR++F + ++ + P + HY CMVDLL
Sbjct: 475 IFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYF-FSMEEHGLIPLKDHYTCMVDLL 533
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG + EA ++++M P VW +LL+ C H +G+ A+K+L+++P + G +
Sbjct: 534 GRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYV 593
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L+SN +A +W +V VRK MR+ G+ K PG S +EV +H F+++DKSH + I
Sbjct: 594 LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYS 653
Query: 545 VLKKLYLEMRAI 556
VLK L +M+ +
Sbjct: 654 VLKMLTEQMKRV 665
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 299/509 (58%), Gaps = 4/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SAR+ FE++ + V + S++ AY + E L LY +M E V D
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ AL AC SL LK G+ I + E G+ + V +++L +Y KCG+++ A F
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAKCGELDAARAVFN 402
Query: 136 KM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ Q++++ CW++MI+ G +EA++ Y +M EG +E ++ AC+ GD
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G+ +HG+ L +V VQ +LV MYAK G L+LA F+ R ++V+W A+I +A
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 522
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NL 312
Q+GL L+L M S G PD V++ S+L ACA G L+LG+ IH ++ F +L
Sbjct: 523 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSL 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ T++++MY +CG AR++F+ M RD++SW + ++Y GH ++ L L+L+M+
Sbjct: 583 MVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLH 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++P+ TF S+L SH+GL+ G F M S++++ P +H+ CMVDLL R+G + +
Sbjct: 643 GIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRD 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +V+SM +P W+ +L C H ++ A++V +L+P++ +++L+S+ F
Sbjct: 703 AEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTA 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+E V+ +M++ G+KK PG S++E
Sbjct: 763 AGLPQEALEVQLSMKEMGLKKPPGQSLIE 791
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 242/457 (52%), Gaps = 12/457 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ NLS ++ +YG + ARK+F+ + R ++ S+I +Y+ E
Sbjct: 176 IIRDNLSLQNA----LVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEA 231
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L LY QM + ++PDS TFT AL AC L+D G+ I + V +D FVGS+++N+
Sbjct: 232 LDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESD-FVGSALINM 287
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y +CG ++ A AFEK+Q K +VCW+S++ V REA+D Y RM EG+ AD V
Sbjct: 288 YARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTY 347
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-S 239
+ + ACA LG + G ++H + V T+L+ MYAK G LD A VF +
Sbjct: 348 VTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRVRQ 406
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ N+ W A+IS +AQ G LEL +M + G P+ + + L AC+ G L+ G
Sbjct: 407 KRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMK 466
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHG+ N+ + +++ MY+KCG A++ F+ +DL+SWN +I +Y HG
Sbjct: 467 IHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGL 526
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G EAL L+ M V PD T AS LSA + SG ++ GR ++ + +
Sbjct: 527 GREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQT 586
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+V++ R G +E A + + M L+ W A+ S
Sbjct: 587 ALVNMYGRCGRLETARSMFEDMGQRDVLS-WTAMTSA 622
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 213/386 (55%), Gaps = 8/386 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELP-LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I +YG +I AR F+ ++ V YN ++ AY + L LY++M +E P
Sbjct: 83 LIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEP 142
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGY--GNDVFVGSSMLNLYVKCGKMNEAMV 132
D T+ + L +C ++ L+ EI +E +++ + ++++N+Y KCG + EA
Sbjct: 143 DKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARK 202
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ ++ +D V W+SMI+ NG EA+D Y++M +GI D + + AC L D
Sbjct: 203 VFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD 262
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G ++H + ++ D V ++L++MYA+ G + A F+ + ++V W +L++
Sbjct: 263 ---GKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTA 318
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+ Q L+L M G D V+ V+AL ACA +G LK GK+IH +L
Sbjct: 319 YVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSL 378
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V+ T+++ MY+KCG ARA+F+++ Q R++ W +I++Y GH +EAL L+ QM+
Sbjct: 379 VVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVA 438
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEG 397
+P+ TF+++L+A S SG +E G
Sbjct: 439 EGTRPNEYTFSNVLAACSSSGDLEAG 464
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 215/408 (52%), Gaps = 10/408 (2%)
Query: 53 RKESPFEVLGLYNQMIKEDVRPDS--STFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
+K++P + + + + + D R + L+ C L L G+ + R + G+G +
Sbjct: 17 KKKAPVARISVSDALEQLDQRRHGYVELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRN 76
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
F+G+ ++ +Y CG+++ A AF+ K + C++ M++ NG A++ Y RM
Sbjct: 77 QFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMC 136
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR--RHLNLDVKVQTSLVDMYAKTGH 227
+EG + D++ ++ +C+ +G R +H I + + ++ +Q +LV+MY K G
Sbjct: 137 EEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGS 196
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
++ A VF + + V+W ++IS +A NG L+L +M + G +PDS++ SALLA
Sbjct: 197 VEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLA 256
Query: 288 CAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
C + L GK+IH V + +G+++I+MY++CG S AR F+++Q++ ++ W
Sbjct: 257 CTK---LVDGKAIHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWT 313
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
++ +Y H EAL L+ +M V D T+ + L A + G ++EG+ V +
Sbjct: 314 SLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHS-RVFE 372
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
Q H A ++ + A+ GE++ A + + + + + W A++S
Sbjct: 373 CGFQSLVVHTA-LLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISA 419
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 143/285 (50%), Gaps = 18/285 (6%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+Q C LG G VH + +R + + L+ MY G + LA F+N + I
Sbjct: 48 LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107
Query: 243 IVT-WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
V + ++S + +NGL LEL M G EPD ++ L +C+ +G L+ + IH
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167
Query: 302 GYTVRRFDF---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+ NL L ++++MY KCG AR +FD +++RD +SW +I+SY +G
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY- 417
+EAL L+ QM ++PD TF S L L+ + LV +G+ +VS E +
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSAL--LACTKLV-DGKAIHARIVSS----NMESDFV 280
Query: 418 -ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CH 457
+ ++++ AR G+V A + + + + + W +L++ CH
Sbjct: 281 GSALINMYARCGDVSSARQAFEKIQNKH-VVCWTSLMTAYVQTCH 324
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 302/554 (54%), Gaps = 33/554 (5%)
Query: 38 LRGVD-----TYNSIIIAYSRKESPFEVLGLYNQMIKE---DVRPDSSTFTVALKACVSL 89
L+G++ ++N I +S E+P + + Y QM++ + RPD T+ V K C L
Sbjct: 35 LKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADL 94
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
+G I +L V ++ ++++ CG+M A F++ +DLV W+ +I
Sbjct: 95 RLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLI 154
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
NG G+ +A++ YK M+ EG+ D+V M+GL+ +CA LGD G + Y L
Sbjct: 155 NGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLR 214
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT-------------WGALISGFAQN 256
+ + + +L+DM++K G + A +F N+ + IV+ W A+I G Q
Sbjct: 215 MTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQA 274
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
+ L L EMQ+ +PD ++++ L AC+Q+G L +G IH Y + N+ LG
Sbjct: 275 KRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALG 334
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
TS++DMY+KCG S A +F +Q+R+ +++ II +HG A+S F +MI+ +
Sbjct: 335 TSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 394
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD TF LLSA H G+++ GR +F M S++ + P KHY+ MVDLL RAG +EEA K
Sbjct: 395 PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADK 454
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQK 495
+++SM E AVW ALL GC H +GEK AKK+L+L+P D GI+ L+ +
Sbjct: 455 LMESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANM 514
Query: 496 WEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV---------- 545
WE+ R+ M + G++K+PG S +EVNG + FI+ DKS + E I
Sbjct: 515 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCLGTHMGR 574
Query: 546 -LKKLYLEMRAISS 558
L LY EMR + S
Sbjct: 575 SLSVLYSEMRLLRS 588
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 197/405 (48%), Gaps = 29/405 (7%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I ++ ++ +ARK+F+E P+R + ++N +I Y + + + +Y M E V+PD
Sbjct: 123 IHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDD 182
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
T + +C L DL G+E + G + + +++++++ KCG ++EA F+
Sbjct: 183 VTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDN 242
Query: 137 -------------MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
M+ KD+V W++MI G V + ++A+ ++ M+ D DE+ M+
Sbjct: 243 LEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHC 302
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ AC+ LG G+ +H Y + L+L+V + TSLVDMYAK G++ A VF + N
Sbjct: 303 LSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNS 362
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
+T+ A+I G A +G A + + EM G PD ++ + L AC G ++ G+
Sbjct: 363 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 422
Query: 304 TVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGH-- 358
RF+ N L + ++D+ + G+ A L + M D W ++ +HG+
Sbjct: 423 MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHGNVK 482
Query: 359 -GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
GE+A L++ P S LL G+ E W D
Sbjct: 483 LGEKAAKKLLEL-----DPSDSGIYVLL-----DGMYGEANMWED 517
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 174/380 (45%), Gaps = 21/380 (5%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI---DADEVVMMGL 183
+N + + ++ + W+ I G + P++AV AYK+M + G D L
Sbjct: 28 LNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVL 87
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CADL + G + G+ + L L V + + M+A G ++ A VF ++
Sbjct: 88 FKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDL 147
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
V+W LI+G+ + G +E+ M+S G +PD V+++ + +CA +G L GK + Y
Sbjct: 148 VSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEY 207
Query: 304 T-VRRFDFNLVLGTSVIDMYSKCGVPSCAR-------------ALFDQMQSRDLISWNVI 349
+ L +++DM+SKCG AR LFD M+ +D++ WN +
Sbjct: 208 VKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAM 267
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I ++AL+LF +M + PD T LSA S G ++ G W + K+
Sbjct: 268 IGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVG-IWIHRYIEKHS 326
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ +VD+ A+ G + EAL + + T L + A++ G H S
Sbjct: 327 LSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSL-TYTAIIGGLALHGDASTAISYF 385
Query: 470 KKVLK--LNPDDLGIHALVS 487
+++ + PD++ L+S
Sbjct: 386 NEMIDAGIAPDEITFIGLLS 405
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 20/282 (7%)
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL---ELLMEMQSCGFEPDSV 279
+++ +L+ + K + N +W I GF+++ + + ++ C PD
Sbjct: 23 SESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHF 82
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ CA + LG I G+ + R + + + I M++ CG AR +FD+
Sbjct: 83 TYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDES 142
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
RDL+SWN +I Y G GE+A+ ++ M VKPD T L+S+ + G + G+
Sbjct: 143 PVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGK 202
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST------------EPGL 446
+++ V ++ T ++D+ ++ G++ EA +I D++ E +
Sbjct: 203 EFYEY-VKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDV 261
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLG-IHAL 485
+W A++ G K+ + +++ N PD++ IH L
Sbjct: 262 VMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCL 303
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 2/155 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I A +F + R TY +II + + +N+MI + PD
Sbjct: 337 LVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 396
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRK-AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TF L AC ++ G + + + + S M++L + G + EA
Sbjct: 397 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLM 456
Query: 135 EKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
E M D W +++ G +G + A K++
Sbjct: 457 ESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKL 491
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 312/519 (60%), Gaps = 10/519 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K + P S+F A+KAC SL D+ G++ +
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A GY +D+FV S+++ +Y CGK+ +A F+++ ++D+V W+SMI G NG +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALD 160
Query: 161 AVDAYKRMKKEGIDADEVVM---MGL---IQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
AV +K + + D D+ + MGL I AC+ + S+H + I+R + V V
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 215 QTSLVDMYAKTGH--LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QS 271
+L+D YAK G + +A +F + + V++ +++S +AQ+G++ E+ + ++
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC 330
++++L + LLA + G L++GK IH +R + ++++GTS+IDMY KCG
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR FD+M+++++ SW +IA YG+HGH +AL LF MI++ V+P++ TF S+L+A SH
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL EG WF+ M ++ ++P +HY CMVDLL RAG +++A ++ M +P +W
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
+LL+ C HK + E ++ +L+ + G + L+S+ +A +W++V VR M+ G
Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRG 520
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ K PG+S++E+NGE+H F++ D+ H Q E I L +L
Sbjct: 521 LVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 178/353 (50%), Gaps = 23/353 (6%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + D+ W+S+I L +G EA+ A+ M+K + I+AC+ L D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
H + D+ V ++L+ MY+ G L+ A VF + + +IV+W ++I G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155
Query: 257 GLAGSTLELLMEM------QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G A + L ++ DS+ LVS + AC+++ L +SIH + ++R FD
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 310 FNLVLGTSVIDMYSKCGVP--SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ +G +++D Y+K G + AR +FDQ+ +D +S+N I++ Y G EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 368 QMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++++ +V + T +++L A+SHSG + G+ D ++ + ++ ++D+ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIVGTSIIDMYCK 334
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNP 477
G VE A K D M + + W A+++ G H H A K L+L P
Sbjct: 335 CGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGH---------AAKALELFP 377
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 12/359 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + ARK+F+E+P R + ++ S+I Y + + + L+ ++ ++ D
Sbjct: 117 LIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDD 176
Query: 76 SSTF------TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ F + AC + + E I ++ G+ V VG+++L+ Y K G+
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 130 AMVA--FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQA 186
A+ F+++ KD V ++S+++ +G EA + ++R+ K + + + + + ++ A
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+ G R G +H IR L DV V TS++DMY K G ++ A F M N+ +W
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+I+G+ +G A LEL M G P+ ++ VS L AC+ G G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 307 RFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
RF L ++D+ + G A L +M+ + D I W+ ++A+ IH + E A
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 316/535 (59%), Gaps = 2/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A +F + ++NS++ + + E L Y++M +PD
Sbjct: 323 LIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 382
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A + G +I A++ G +D+ VG+S++++Y K M F+
Sbjct: 383 LVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 442
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM KD+V W+++I G NG A++ ++ ++ EGID D +++ ++ AC+ L
Sbjct: 443 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 502
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H Y IR+ L+ D+ +Q +VD+Y + G++D A+ +F+ + ++V+W ++IS +
Sbjct: 503 VKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVH 561
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGLA LEL M+ G EPDS+SLVS L A A + LK GK IHG+ +R+ F L
Sbjct: 562 NGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSL 621
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY++CG +R +F+ ++++DL+ W +I +YG+HG G A+ LF +M + +
Sbjct: 622 ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 681
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH F ++L A SHSGL+ EGR + + M +Y+++P +HYAC+VDLL RA +EEA
Sbjct: 682 APDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAY 741
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M EP VW ALL C H +GE A+K+L+++P++ G + LVSN ++ E+
Sbjct: 742 QFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAER 801
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W++V VR M+ SG+KK PG S +EV ++H F+ DKSH Q +I L ++
Sbjct: 802 RWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQI 856
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 248/442 (56%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR-GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
I+ +Y ND+ AR+LF+ +P + V ++NS+I AYS E L L+ +M K + P
Sbjct: 221 IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP 280
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
++ TF AL+AC +K G I ++ Y +VFV ++++ +Y + GKM EA F
Sbjct: 281 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 340
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M D + W+SM++G V NG EA+ Y M+ G D V ++ +I A A G++
Sbjct: 341 YNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 400
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G+ +H Y+++ L+ D++V SLVDMYAK + +F M ++V+W +I+G A
Sbjct: 401 HGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHA 460
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QNG LEL E+Q G + D + + S LLAC+ + + K IH Y +R+ +LVL
Sbjct: 461 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVL 520
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++D+Y +CG A +F+ ++ +D++SW +I+ Y +G EAL LF M ET V
Sbjct: 521 QNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGV 580
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEA 433
+PD + S+LSA + +++G+ ++ K + ++ + + +VD+ AR G +E++
Sbjct: 581 EPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKS 638
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + + L +W ++++
Sbjct: 639 RNVFNFIRNK-DLVLWTSMINA 659
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 248/464 (53%), Gaps = 11/464 (2%)
Query: 1 MIKTNLSAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MI +N A NSV R++ +YG +V A KLF+ +P + + T+N++I AY P
Sbjct: 104 MITSN--ALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEP 161
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY +M + D+ TF LKAC L D + G E+ A++ GY + VFV +S+
Sbjct: 162 LGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSI 221
Query: 118 LNLYVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+ +Y KC +N A F++M +++D+V W+SMI+ NGQ EA+ + M+K + +
Sbjct: 222 VGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPN 281
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ +QAC D + G+ +H ++ ++V V +L+ MYA+ G + A+++F
Sbjct: 282 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 341
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
NM + ++W +++SGF QNGL L+ EM+ G +PD V+++S + A A+ G
Sbjct: 342 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLH 401
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G IH Y ++ D +L +G S++DMY+K +FD+M +D++SW IIA +
Sbjct: 402 GMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQ 461
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G AL LF ++ + D +S+L A S L+ + ++ K +
Sbjct: 462 NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQ 521
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ +VD+ G V+ A ++ + + + + W +++S C+ H
Sbjct: 522 N--GIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVH 561
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 165/318 (51%), Gaps = 3/318 (0%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
++ L+ C S L G+++ + N VF+ + ++ +Y KCG + +A F+
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M K + W++MI V NG+P +++ Y+ M+ GI D +++AC L D R+G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQ 255
VHG +I+ V V S+V MY K L+ A +F M + ++V+W ++IS ++
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG + L L EMQ P++ + V+AL AC F+K G IH ++ + N+ +
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++I MY++ G A +F M D ISWN +++ + +G EAL + +M +
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 375 KPDHSTFASLLSALSHSG 392
KPD S+++A + SG
Sbjct: 380 KPDLVAVISIIAASARSG 397
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 320/580 (55%), Gaps = 49/580 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
++A+Y + ARK+F+E+ + V ++NSII +Y++ P L ++++M E RP
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP 227
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T L C SL +G+++ AV ++FVG+ ++++Y KCG M+EA F
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE----------------------- 171
M KD+V W++M+ G G+ +AV +++M++E
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 172 ------------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-------DV 212
GI +EV ++ ++ CA +G G +H Y+I+ ++L +
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLELLMEM- 269
V L+DMYAK +D A +F ++S ++VTW +I G++Q+G A LELL EM
Sbjct: 408 MVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 270 -QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCG 326
+ C P++ ++ AL+ACA + L++GK IH Y +R + L + +IDMY+KCG
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
S AR +FD M +++ ++W ++ YG+HG+GEEAL +F +M K D T +L
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSG++++G +F+ M + + + P +HYAC+VDLL RAG + AL++++ M EP
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VWVA LS C H K +GE A+K+ +L + G + L+SN +A +W++V +R M
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
R G+KK PG S VE F + DK+H ++I VL
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 247/515 (47%), Gaps = 67/515 (13%)
Query: 1 MIKTNLSAYG----NSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRK 54
+I L ++G N +I+ Y + A L P GV +NS+I +Y
Sbjct: 46 LIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
+ L L+ M PD+ TF KAC + ++ GE ++ G+ ++VFVG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GI 173
++++ +Y +C +++A F++M D+V W+S+I G+P+ A++ + RM E G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D + ++ ++ CA LG G +H +++ + ++ V LVDMYAK G +D A+
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 234 VFKNMS-----------------------------------RINIVTWGALISGFAQNGL 258
VF NMS ++++VTW A ISG+AQ GL
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---------RFD 309
L + +M S G +P+ V+L+S L CA +G L GK IH Y ++ D
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+V+ +IDMY+KC ARA+FD + + RD+++W V+I Y HG +AL L
Sbjct: 406 ENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 368 QMIE--TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-----CM 420
+M E +P+ T + L A + + G+ + Y ++ + C+
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGK-----QIHAYALRNQQNAVPLFVSNCL 519
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+D+ A+ G + +A + D+M + + W +L++G
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTG 553
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 9/309 (2%)
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNGLAGSTLELLM 267
L + + + L+ Y G L A + + S + W +LI + NG A L L
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCG 326
M S + PD+ + AC +I ++ G+S H + V F N+ +G +++ MYS+C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFASLL 385
S AR +FD+M D++SWN II SY G + AL +F +M E +PD+ T ++L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ G G+ V+ IQ C+VD+ A+ G ++EA + +MS +
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-D 294
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
+ W A+++G +F ++ +K+ K+ D + A +S +A E GV
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG-YAQRGLGYEALGVC 353
Query: 504 KTMRKSGMK 512
+ M SG+K
Sbjct: 354 RQMLSSGIK 362
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 307/535 (57%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I ++FE++ R V ++ +II E L +++M + V D
Sbjct: 165 LIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYD 224
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF +ALKA L G+ I + ++ G+ FV +++ +Y KCGK + M FE
Sbjct: 225 SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFE 284
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ D+V W+++I+ V G+ AV+A+KRM+K + ++ +I +CA+L +++
Sbjct: 285 KMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKW 344
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ +R L + V S++ +Y+K G L AS VF ++R +I++W +IS ++Q
Sbjct: 345 GEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQ 404
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G A + L M+ G +P+ +L S L C + L+ GK +H + + D ++
Sbjct: 405 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMV 464
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++I MYSKCG A +F+ M+ D+ISW +I Y HG+ +EA++LF ++ +
Sbjct: 465 HSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGL 524
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD+ F +L+A +H+G+V+ G Y+F LM + Y+I P+++HY C++DLL RAG + EA
Sbjct: 525 KPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAE 584
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
I+ SM VW LL C H G A+++L+L+P+ G H ++N +A +
Sbjct: 585 HIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKG 644
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W+E A +RK M+ G+ K G+S V VN +L+AF+ D++H Q E I VLK L
Sbjct: 645 RWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLL 699
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 230/462 (49%), Gaps = 10/462 (2%)
Query: 23 KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTV 81
+ + AR +F+++ R ++ ++I Y +E L L++ M + + D +V
Sbjct: 70 QGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISV 129
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
ALKAC +++ GE + +V+ G + VFV S+++++Y+K GK+ + FEKM ++
Sbjct: 130 ALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRN 189
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+++I GLV G E + + M + + D ++A AD G ++H
Sbjct: 190 VVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHT 249
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+I++ + V +L MY K G D +F+ M ++V+W LIS + Q G
Sbjct: 250 QTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEH 309
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVID 320
+E M+ P+ + + + +CA + K G+ IHG+ +R N L + S+I
Sbjct: 310 AVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIIT 369
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
+YSKCG+ A +F + +D+ISW+ II+ Y G+ +EA M KP+
Sbjct: 370 LYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFA 429
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+LS L+E+G+ ++ I ++ ++ + ++ G V+EA KI + M
Sbjct: 430 LSSVLSVCGSMALLEQGKQVHAHLLC-IGIDHEAMVHSAIISMYSKCGSVQEASKIFNGM 488
Query: 441 STEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPD 478
++ W A+++G H + ++ EK++ + L PD
Sbjct: 489 KINDIIS-WTAMINGYAEHGYSQEAINLFEKISS--VGLKPD 527
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 149/278 (53%), Gaps = 2/278 (0%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGI 173
+S L VK G++ +A F+KM +D + W+++I G V EA+ + M G
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D+ ++ ++ACA + FG +HG+S++ L V V ++L+DMY K G ++
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF+ M N+V+W A+I+G G L EM DS + AL A A
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L GK+IH T+++ FD + + ++ MY+KCG P LF++M+ D++SW +I++
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLIST 300
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
Y G E A+ F +M ++ V P+ TFA+++S+ ++
Sbjct: 301 YVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCAN 338
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 304/558 (54%), Gaps = 40/558 (7%)
Query: 38 LRGVD-----TYNSIIIAYSRKESPFEVLGLYNQMIKE---DVRPDSSTFTVALKACVSL 89
L+G++ ++N I +S E+P E LY QM++ + RPD T+ V K C L
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
+G I ++L V ++ ++++ CG M A F++ +DLV W+ +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
NG G+ +A+ YK M+ EG+ D+V M+GL+ +C+ LGD G + Y L
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL----------- 258
+ + + +L+DM++K G + A +F N+ + IV+W +ISG+A+ GL
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 259 ------------AGS--------TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
GS L L EMQ+ +PD ++++ L AC+Q+G L +G
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH Y + N+ LGTS++DMY+KCG S A ++F +Q+R+ +++ II +HG
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
A+S F +MI+ + PD TF LLSA H G+++ GR +F M S++ + P KHY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+ MVDLL RAG +EEA ++++SM E AVW ALL GC H +GEK AKK+L+L+P
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
D GI+ L+ + WE+ R+ M + G++K+PG S +EVNG + FI+ DKS
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 538 QYEDIVYVLKKLYLEMRA 555
+ E I L L MR+
Sbjct: 650 ESEKIYDRLHCLGRHMRS 667
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 200/423 (47%), Gaps = 47/423 (11%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I ++ D+ +ARK+F+E P+R + ++N +I Y + + + +Y M E V+PD
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA------ 130
T + +C L DL G+E + E G + + +++++++ KCG ++EA
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 131 -----------MVA--------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
M++ F+ M+ KD+V W++MI G V + ++A+ +
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ M+ DE+ M+ + AC+ LG G+ +H Y + L+L+V + TSLVDMYAK
Sbjct: 378 QEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKC 437
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G++ A VF + N +T+ A+I G A +G A + + EM G PD ++ + L
Sbjct: 438 GNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Query: 286 LACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRD 342
AC G ++ G+ RF+ N L + ++D+ + G+ A L + M D
Sbjct: 498 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEAD 557
Query: 343 LISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
W ++ +HG+ GE+A L++ P S LL G+ E
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLEL-----DPSDSGIYVLL-----DGMYGEANM 607
Query: 400 WFD 402
W D
Sbjct: 608 WED 610
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 332/644 (51%), Gaps = 73/644 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT L + ++++ Y A + + +P V +++++I A+S+
Sbjct: 39 ILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHA 98
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++QM+ + PD+ A+KAC L LK ++ A G+ +D FV SS++++
Sbjct: 99 LSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHM 158
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMI------------------------------- 149
Y+KC ++ +A F++M D+V WS+++
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 150 NGLV--FN--GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
NG++ FN G EAV + M G + D + ++ A DL D G+ +HGY I+
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-------------------------- 239
+ L D V ++L+DMY K S VF M
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 240 ---------RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+N+V+W ++I+ +QNG LEL EMQ G +P+SV++ L AC
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
I L GK+ H +++RR ++ +G+++IDMY+KCG +R FD + +++L+ WN +
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA Y +HG +EA+ +F M + KPD +F +LSA S SGL EEG Y+F+ M SKY
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
I+ +HYACMV LL+RAG++E+A ++ M P VW ALLS C H S+GE A
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+ +L P + G + L+SN +A + W EV VR M+ G++K PG S +EV ++H
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHML 638
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGH--MEEHEEHD 571
+ DKSH Q I+ L KL +EM+ + + + + +++ EE D
Sbjct: 639 LAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQD 682
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A L +R H + ++ L D + T L+ YA A+ V + N+ ++
Sbjct: 27 ASLSQTR---QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVR 306
LI F++ L +M + G PD+ L SA+ ACA + LK + +HG +V
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
FD + + +S++ MY KC A +FD+M D++SW+ ++A+Y G +EA LF
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
+M ++ V+P+ ++ +++ +HSGL E F
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 219/693 (31%), Positives = 341/693 (49%), Gaps = 115/693 (16%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELP----------------------- 37
MI + G+ + R++ +Y +++V AR+LFEE+P
Sbjct: 39 MIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELG 98
Query: 38 ----------LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA-- 85
+R YN++I Y+ L L+ M ++D RPD TFT L A
Sbjct: 99 REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158
Query: 86 ----------------------CVSLMDLKMGEEIW-RKAVELGYG-------------- 108
CVS L ++ ++A ELG
Sbjct: 159 LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEM 218
Query: 109 --NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
D ++M+ YV+ +N A FE M W++MI+G V G +EA+ +
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD----VKVQTSLVDMY 222
+M+ GI D++ +I ACA++G + G VH Y ++ LN + + V +L+ +Y
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGA-------------------------------LIS 251
K +D A +F M NI+TW A +IS
Sbjct: 339 CKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G AQNG L+L +M+ GFEP + AL AC+ +G L+ G+ +H V ++
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L +G ++I MY+KCGV A ++F M S DL+SWN +IA+ G HGHG +A+ LF QM+
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V PD TF ++L+A SH+GLVE+GR++F+ M+ Y I P E HYA MVDL RAG
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
A ++DSM ++PG VW ALL+GC H +G + A+++ KL P + G + L+SN +
Sbjct: 579 SYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIY 638
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A +W EVA VRK MR ++K P S +EV ++H F+++D H + + L++L
Sbjct: 639 ADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLG 698
Query: 551 LEMRAI-----SSWLQGHMEEHEEHDPLSTAAQ 578
LEM+ + + ++ ME ++ LST ++
Sbjct: 699 LEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSE 731
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/510 (36%), Positives = 293/510 (57%), Gaps = 6/510 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I SA K+F ++ LR V + S+I Y + + E L L+N+M + +V +
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ + AC L L G+ V+ G + +S+L++YVKCG ++ A F
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ DLV W++MI G NG EA+ +++MK I + V + ++ C + +
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHG SI+ + D V +LV MYAK A +VF+ S +IV W ++ISGF+Q
Sbjct: 362 GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF----N 311
NG L L M S P+ V++ S ACA +G L +G S+H Y+V+ F +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK-LGFLASSS 479
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +GT+++D Y+KCG P AR +FD ++ ++ I+W+ +I YG G +L LF +M++
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KP+ STF S+LSA H+G+V EG+ +F M Y P+ KHY CMVD+LARAGE+E
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+AL I++ M +P + + A L GC H +F +GE V KK+L L+PDD + LVSN +A
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+ +W + VR M++ G+ K+ G+S +E
Sbjct: 660 SDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 227/443 (51%), Gaps = 5/443 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++LYG AR +F+++P + ++ Y + EV+ LY+ ++K R
Sbjct: 81 KLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY 140
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D F+ ALKAC L DL G++I + V++ + N V G +L++Y KCG++ A
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKV 198
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F + +++VCW+SMI G V N E + + RM++ + +E LI AC L
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G HG ++ + L + TSL+DMY K G + A VF S +++V W A+I G+
Sbjct: 259 HQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 318
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
NG L L +M+ +P+ V++ S L C I L+LG+S+HG +++ ++
Sbjct: 319 THNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN 378
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++ MY+KC A+ +F+ +D+++WN II+ + +G EAL LF +M
Sbjct: 379 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES 438
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEE 432
V P+ T ASL SA + G + G V + + H ++D A+ G+ +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A I D++ E W A++ G
Sbjct: 499 ARLIFDTIE-EKNTITWSAMIGG 520
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 199/404 (49%), Gaps = 12/404 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ + V ++ +Y DI +AR++F E + + ++I+ Y+ S E
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M +++P+ T L C + +L++G + ++++G D V ++++++
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHM 386
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + +A FE KD+V W+S+I+G NG EA+ + RM E + + V +
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
L ACA LG G S+H YS++ + V V T+L+D YAK G A +F +
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N +TW A+I G+ + G +LEL EM +P+ + S L AC G + GK
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 299 SIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGI 355
+ ++F T ++DM ++ G A + ++M + D+ + + G+
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 626
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
H + + +M++ + PD +++ L+S L S +GR+
Sbjct: 627 HSRFDLGEIVIKKMLD--LHPDDASYYVLVSNLYAS----DGRW 664
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 186/381 (48%), Gaps = 8/381 (2%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
SS + L C ++ L+ + +G D+ + + +++LY G +A + F+
Sbjct: 44 SSPCFLLLSKCTNIDSLRQSHGVLTGNGLMG---DISIATKLVSLYGFFGYTKDARLVFD 100
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ D W M+ N + E V Y + K G D++V ++AC +L D
Sbjct: 101 QIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDN 160
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ + D V T L+DMYAK G + A VF +++ N+V W ++I+G+ +
Sbjct: 161 GKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L L L M+ + + + ++AC ++ L GK HG V+ + + L
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
TS++DMY KCG S AR +F++ DL+ W +I Y +G EALSLF +M +
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ T AS+LS +E GR L + K I T A +V + A+ + +A
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSI-KVGIWDTNVANA-LVHMYAKCYQNRDA- 396
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
K V M +E + W +++SG
Sbjct: 397 KYVFEMESEKDIVAWNSIISG 417
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 149/309 (48%), Gaps = 11/309 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ C ++ R HG L D+ + T LV +Y G+ A VF + +
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W ++ + N + ++L + GF D + AL AC ++ L GK IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 303 YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
V+ F+ V+ T ++DMY+KCG A +F+ + R+++ W +IA Y + EE
Sbjct: 167 QLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L LF +M E V + T+ +L+ A + + +G+ WF + K I+ + ++D
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK-WFHGCLVKSGIELSSCLVTSLLD 285
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHN---HKKFSIGEKVAKKVLKLNPD 478
+ + G++ A ++ + S L +W A++ G HN ++ S+ +K+ K +++ P+
Sbjct: 286 MYVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKM--KGVEIKPN 342
Query: 479 DLGIHALVS 487
+ I +++S
Sbjct: 343 CVTIASVLS 351
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 289/495 (58%), Gaps = 5/495 (1%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + LY M++ PD+ +F LK+C SL G+++ + G + FV ++++
Sbjct: 33 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALI 92
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDL--VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++Y KCG + +A FE+ VC++++I+G N + +A ++RMK+ G+ D
Sbjct: 93 SMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVD 152
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
V ++GL+ C G S+HG ++ +V V S + MY K G ++ +F
Sbjct: 153 SVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFD 212
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M ++TW A+ISG++QNGLA LEL +M+S G PD +LVS L +CA +G K+
Sbjct: 213 EMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 272
Query: 297 GKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+ + G V F N+ L ++I MY++CG + ARA+FD M + L+SW +I YG
Sbjct: 273 GQEV-GELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 331
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG GE L+LF MI+ ++PD + F +LSA SHSGL ++G F M +YK++P
Sbjct: 332 MHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 391
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY+C+VDLL RAG ++EA++ +DSM EP AVW ALL C HK + E KV++
Sbjct: 392 EHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 451
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
P ++G + L+SN ++ + E + +R MR+ +K PGYS VE G++H F+ D+
Sbjct: 452 FEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDR 511
Query: 535 SHNQYEDIVYVLKKL 549
SH Q E++ +L +L
Sbjct: 512 SHEQTEEVHRMLDEL 526
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 8/317 (2%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ + L + E++ Y+ M + G D ++++CA L G +H + I
Sbjct: 18 WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK---NMSRINIVTWGALISGFAQNGLAGS 261
R + V T+L+ MY K G ++ A VF+ + S++ V + ALISG+ N
Sbjct: 78 RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLG-VCYNALISGYTANSKVSD 136
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVID 320
+ M+ G DSV+++ + C +L LG+S+HG V+ ++ V + S I
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY KCG R LFD+M + LI+WN +I+ Y +G + L LF QM + V PD T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+LS+ +H G + G+ +L V P ++ + AR G + +A + D M
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGEL-VEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 441 STEPGLAVWVALLSGCH 457
+ L W A++ GC+
Sbjct: 316 PVK-SLVSWTAMI-GCY 330
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 192/407 (47%), Gaps = 15/407 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR---GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+I++Y + ARK+FEE P GV YN++I Y+ + ++ +M + V
Sbjct: 91 LISMYCKCGLVEDARKVFEENPHSSQLGV-CYNALISGYTANSKVSDAAFMFRRMKETGV 149
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
DS T + C L +G + + V+ G ++V V +S + +Y+KCG +
Sbjct: 150 SVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRR 209
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M K L+ W+++I+G NG + ++ +++MK G+ D ++ ++ +CA LG
Sbjct: 210 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGA 269
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G V +V + +L+ MYA+ G+L A VF M ++V+W A+I
Sbjct: 270 KKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 329
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+ +G+ + L L +M G PD V L AC+ G K + + + ++ L
Sbjct: 330 YGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD--KGLELFRAMKREYKL 387
Query: 313 VLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFL 367
G + ++D+ + G A D M D W ++ + IH + + A F
Sbjct: 388 EPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFA 447
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK--YKIQP 412
++IE +P + + L+S + +EG + +M+ + ++ +P
Sbjct: 448 KVIE--FEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 492
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 27/235 (11%)
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F S + +W + A L ++ L M G PD+ S L +CA +
Sbjct: 7 FVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 66
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIA 351
G+ +H + +R + + T++I MY KCG+ AR +F++ S+ + +N +I+
Sbjct: 67 VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYW 400
Y + +A +F +M ET V D T L+ + H V+ G Y
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+++ + + + + G VE ++ D M + GL W A++SG
Sbjct: 187 EVAVLNSF------------ITMYMKCGSVESGRRLFDEMPVK-GLITWNAVISG 228
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 307/543 (56%), Gaps = 3/543 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y D+ +AR +F+++P R ++N++I Y E L L+ MIK V
Sbjct: 245 VNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPV 304
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T T + AC L D ++G +I + +G D + +S++ +Y G + EA
Sbjct: 305 DPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAET 364
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F + + +DLV W++MI+G P++A++ YK M+ EGI DE+ + ++ AC+ L +
Sbjct: 365 VFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCN 424
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+++H + ++ L V SL+DMYAK +D A +F + NIV+W ++I G
Sbjct: 425 LDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILG 484
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
N L EM +P+SV+LV L ACA+IG L GK IH + +R F+
Sbjct: 485 LRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFD 543
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +++DMY +CG A F + ++ SWN+++ Y G G A LF +M+E
Sbjct: 544 GFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVE 602
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V P+ TF S+L A S SG+V EG +F+ M KY I P KHYAC+VDLL R+G++E
Sbjct: 603 SNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLE 662
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + + M +P AVW ALL+ C H +GE A+ + + + +G + L+SN +A
Sbjct: 663 EAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYA 722
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW++VA VRK MR++G+ PG S VEV G +HAF+ D H Q ++I +L++ Y
Sbjct: 723 DNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYK 782
Query: 552 EMR 554
+M+
Sbjct: 783 KMK 785
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 229/452 (50%), Gaps = 18/452 (3%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ + +G ++V A +F + R + ++N ++ Y++ E L LY++M+
Sbjct: 144 GNALLSMFVRFG---NLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLW 200
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V+PD TF L+ C + +L G EI + G+ +DV V ++++ +YVKCG +N
Sbjct: 201 VGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNT 260
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F+KM +D + W++MI+G NG E + + M K +D D + M +I AC
Sbjct: 261 ARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACEL 320
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LGD R G +HGY +R D + SL+ MY+ G ++ A VF ++V+W A+
Sbjct: 321 LGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAM 380
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-- 307
ISG+ + LE M++ G PD +++ L AC+ + L +G ++H ++
Sbjct: 381 ISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGL 440
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+++V S+IDMY+KC A +F ++++SW II I+ EAL F
Sbjct: 441 VSYSIV-ANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFR 499
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDL 423
+MI + KP+ T +LSA + G + G+ + VS P ++D+
Sbjct: 500 EMIRRL-KPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNA-----ILDM 553
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
R G +E A K S+ E + W LL+G
Sbjct: 554 YVRCGRMEYAWKQFFSVDHE--VTSWNILLTG 583
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 193/381 (50%), Gaps = 12/381 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+++L+++V+ G + +A F +M++++L W+ ++ G G EA+D Y RM G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ D +++ C + + G +H + IR DV V +L+ MY K G ++ A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF M + ++W A+ISG+ +NG+ L L M +PD +++ S + AC +G
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 293 FLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+LG+ IHGY +R F + + S+I MYS G+ A +F + + RDL+SW +I+
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK---- 407
Y ++AL + M + PD T A +LSA S ++ G ++ K
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVS 442
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH-NHKKFSIGE 466
Y I ++D+ A+ +++AL+I S + E + W +++ G N++ F
Sbjct: 443 YSIVANS-----LIDMYAKCKCIDKALEIFHS-TLEKNIVSWTSIILGLRINNRCFEALF 496
Query: 467 KVAKKVLKLNPDDLGIHALVS 487
+ + +L P+ + + ++S
Sbjct: 497 FFREMIRRLKPNSVTLVCVLS 517
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 5/315 (1%)
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+S I L G A+ M + I ++ + LI+ C + G V+ Y
Sbjct: 75 NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+L +++ +L+ M+ + G+L A +VF M + N+ +W L+ G+A+ GL L+L
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
M G +PD + L C + L G+ IH + +R F+ ++ + ++I MY K
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG + AR +FD+M +RD ISWN +I+ Y +G E L LF MI+ V PD T S+
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314
Query: 385 LSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
++A G GR ++ +++ P+ + ++ + + G +EEA + V S +
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEA-ETVFSRTEC 371
Query: 444 PGLAVWVALLSGCHN 458
L W A++SG N
Sbjct: 372 RDLVSWTAMISGYEN 386
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 12/255 (4%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+ L +Y +I +Y I A ++F + + ++ SII+ FE L
Sbjct: 437 QKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALF 496
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
+ +MI+ ++P+S T L AC + L G+EI A+ G D F+ +++L++YV
Sbjct: 497 FFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYV 555
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+CG+M A F + ++ W+ ++ G G+ A + ++RM + + +EV +
Sbjct: 556 RCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFIS 614
Query: 183 LIQACADLGDSRFGLSV-----HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ AC+ G GL + YSI +L K +VD+ ++G L+ A +
Sbjct: 615 ILCACSRSGMVAEGLEYFNSMKYKYSIMPNL----KHYACVVDLLGRSGKLEEAYEFIQK 670
Query: 238 MS-RINIVTWGALIS 251
M + + WGAL++
Sbjct: 671 MPMKPDPAVWGALLN 685
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/553 (33%), Positives = 307/553 (55%), Gaps = 4/553 (0%)
Query: 5 NLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY 64
N + GN+ +I++Y + AR++F+ + R ++ ++ AY+ E L Y
Sbjct: 162 NDTTVGNA---LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTY 218
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC 124
+ M++E VRP T+ L AC SL L+ G++I VE Y +DV V +++ +Y+KC
Sbjct: 219 HAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC 278
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G +A FE + +D++ W++MI G V +GQ EA + RM +EG+ D ++
Sbjct: 279 GAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
ACA G G +H + + L DV+ +L++MY+K G + A VF M + ++V
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 398
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W L+ +A + +M G + + ++ + L AC+ LK GK IH
Sbjct: 399 SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV 458
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
V+ +L + +++ MY KCG A +F+ M RD+++WN +I G +G G EAL
Sbjct: 459 VKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEAL 518
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+ M ++P+ +TF ++LSA LVEEGR F M Y I PTEKHYACMVD+
Sbjct: 519 QRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDI 578
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
LARAG + EA ++ ++ +P A+W ALL+ C H IGE+ A+ LKL P + G++
Sbjct: 579 LARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLY 638
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+S +A W +VA +RK M++ G+KK PG S +E+ GE+H+F+ D+SH + ++I
Sbjct: 639 VSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIY 698
Query: 544 YVLKKLYLEMRAI 556
L+ L +M+++
Sbjct: 699 AELETLKKQMKSL 711
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 213/441 (48%), Gaps = 3/441 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + AR+LF++ + V ++N +I Y+ + E L+ M +E + PD
Sbjct: 69 LLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC S L G EI + +E G ND VG++++++Y KCG + +A F+
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFD 188
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V W+++ +G E++ Y M +E + + M ++ AC L
Sbjct: 189 AMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEK 248
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + + + DV+V T+L MY K G A VF+ +S +++ W +I GF
Sbjct: 249 GKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVD 308
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G M G PD + + L ACA+ G L GK IH + ++
Sbjct: 309 SGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF 368
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSK G AR +FD+M RD++SW ++ Y E+ + F QM++ V
Sbjct: 369 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGV 428
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K + T+ +L A S+ ++ G+ +V + A M + + G VE+A+
Sbjct: 429 KANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALM-SMYFKCGSVEDAI 487
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
++ + MS + W L+ G
Sbjct: 488 RVFEGMSMR-DVVTWNTLIGG 507
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 196/385 (50%), Gaps = 13/385 (3%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS + L++CV DL +G+++ + G +V++ +++L LY CG +NEA F
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+K K +V W+ MI+G G +EA + + M++E ++ D+ + ++ AC+
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +H + L D V +L+ MYAK G + A VF M+ + V+W L +A
Sbjct: 147 WGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 206
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
++G +L+ M P ++ ++ L AC + L+ GK IH + V + ++
Sbjct: 207 ESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVR 266
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ T++ MY KCG AR +F+ + RD+I+WN +I + G EEA F +M+E
Sbjct: 267 VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326
Query: 374 VKPDHSTFASLLSALSHSGLVEEG-----RYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
V PD +T+ ++LSA + G + G R D +VS + ++++ ++AG
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNA------LINMYSKAG 380
Query: 429 EVEEALKIVDSMSTEPGLAVWVALL 453
+++A ++ D M + W LL
Sbjct: 381 SMKDARQVFDRMPKR-DVVSWTTLL 404
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 40/349 (11%)
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
D + + ++G D + L+Q+C D G VH + +R + +V + +L+ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
A G ++ A +F S ++V+W +ISG+A GLA L MQ EPD + V
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDFNL----VLGTSVIDMYSKCGVPSCARALFDQM 338
S L AC+ L G+ IH VR + L +G ++I MY+KCG AR +FD M
Sbjct: 134 SILSACSSPAVLNWGREIH---VRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAM 190
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
SRD +SW + +Y G+GEE+L + M++ V+P T+ ++LSA +E+G+
Sbjct: 191 ASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250
Query: 399 ----------YWFDLMVSKY---------KIQPTEKHYAC-----------MVDLLARAG 428
Y D+ VS + + + C M+ +G
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSG 310
Query: 429 EVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
++EEA M E P A + +LS C + G+++ + K
Sbjct: 311 QLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L A ++++Y + A ++FE + +R V T+N++I + E
Sbjct: 458 VVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEA 517
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKAC 86
L Y M E +RP+++TF L AC
Sbjct: 518 LQRYEVMKSEGMRPNAATFVNVLSAC 543
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 301/509 (59%), Gaps = 3/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ +R++F+E+ R V + S+I+ Y + + E L L+N+M + V +
Sbjct: 178 LVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGN 237
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + AC L L G+ + ++ G+ + F+ + +L+LY KCG + +A F+
Sbjct: 238 QYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFD 297
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ DLV W++MI G G PREA+ + + + + + V ++ ACA G
Sbjct: 298 ELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNM 357
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVH I+ + D + +LVDMYAK + A +VF+ + +++ W ++ISG+ Q
Sbjct: 358 GRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQ 416
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
NG A LEL +M+S PD+++LVS L ACA +G ++G S+HGY ++ ++
Sbjct: 417 NGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVY 476
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+GT++++ Y+KCG AR +FD+M ++ I+W+ +I YGI G +L LF M++
Sbjct: 477 VGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEK 536
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+ F ++LSA SHSG++ EG +F+ M Y P+ KHYACMVDLLARAG +EEA
Sbjct: 537 LEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEA 596
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L ++ + +P +++ A L GC H +F +GE +++L+L+PD + L+SN +A E
Sbjct: 597 LDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASE 656
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W + V + M++ G+ K+PG+S+V++
Sbjct: 657 GRWSQANQVMELMKQRGLAKLPGWSLVDI 685
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 237/442 (53%), Gaps = 3/442 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++LYG + AR +F+ + + ++ +I Y +S E++ YN +++ +
Sbjct: 76 KLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNE 135
Query: 75 -DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D+ F++ LKAC L + G ++ + V++G D FV + ++++Y KC ++ ++
Sbjct: 136 YDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRV 194
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ +++VCW+SMI G V N +E + + RM++ ++ ++ + L+ AC LG
Sbjct: 195 FDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGAL 254
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VHGY I+ +L+ + T L+D+Y K G + A VF +S I++V+W A+I G+
Sbjct: 255 HQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGY 314
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQ G L+L + + P++V+ S L ACAQ G L +G+S+H ++ +
Sbjct: 315 AQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDAT 374
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++DMY+KC + AR +F+ + +D+I+WN II+ Y +G+ EAL LF QM
Sbjct: 375 FENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS 434
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V PD T S+LSA + G G + + + +++ A+ G+ E A
Sbjct: 435 VYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESA 494
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
I D M E W A++ G
Sbjct: 495 RVIFDEMG-EKNTITWSAMIGG 515
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 25/410 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ V ++ LY DI A +F+EL + ++ ++I+ Y+++ P E
Sbjct: 264 VIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREA 323
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +D+ P++ T + L AC L MG + ++LG D ++++++
Sbjct: 324 LKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDM 382
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + +A FE + KD++ W+S+I+G NG EA++ + +M+ + + D + +
Sbjct: 383 YAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITL 442
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ ACA +G R G S+HGY+I+ L+ V V T+L++ YAK G + A +F M
Sbjct: 443 VSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMG 502
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N +TW A+I G+ G +LEL +M EP+ V + L AC+ G L G
Sbjct: 503 EKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWR 562
Query: 300 IHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+ ++F ++ ++D+ ++ G A +++ I +V + +HG
Sbjct: 563 YFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIP----IQPDVSLLGAFLHG 618
Query: 358 H--------GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
GE A+ L++ PD + + L+S L S EGR+
Sbjct: 619 CRLHSRFDLGEVAVRRMLEL-----HPDKACYYVLMSNLYAS----EGRW 659
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 133/277 (48%), Gaps = 9/277 (3%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++G+ + + L L VHG L+ D+ +T LV +Y GH++ A +F +
Sbjct: 45 LLGICKTVSSLRKIHALLVVHG------LSEDLLCETKLVSLYGSFGHVECARLMFDRIR 98
Query: 240 RINIVTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++ +W +I + N ++ ++ C E D+V L AC+++ G+
Sbjct: 99 NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGR 158
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H V+ + + T ++DMY+KC +R +FD++ R+++ W +I Y +
Sbjct: 159 KLHCQIVKVGSPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDC 218
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+E L LF +M E +V+ + T SL++A + G + +G+ W V K
Sbjct: 219 LKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGK-WVHGYVIKSGFDLNSFLVT 277
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++DL + G++ +A + D +ST L W A++ G
Sbjct: 278 PLLDLYFKCGDIRDAFSVFDELST-IDLVSWTAMIVG 313
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 332/644 (51%), Gaps = 73/644 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT L + ++++ Y A + + +P V +++++I A+S+
Sbjct: 39 ILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHA 98
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++QM+ + PD+ A+KAC L LK ++ A G+ +D FV SS++++
Sbjct: 99 LSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHM 158
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMI------------------------------- 149
Y+KC ++ +A F++M D+V WS+++
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 150 NGLV--FN--GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
NG++ FN G EAV + M G + D + ++ A DL D G+ +HGY I+
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-------------------------- 239
+ L D V ++L+DMY K S VF M
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 240 ---------RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+N+V+W ++I+ +QNG LEL EMQ G +P+SV++ L AC
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
I L GK+ H +++RR ++ +G+++IDMY+KCG +R FD + +++L+ WN +
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA Y +HG +EA+ +F M + KPD +F +LSA S SGL EEG Y+F+ M SKY
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
I+ +HYACMV LL+RAG++E+A ++ M P VW ALLS C H S+GE A
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+ +L P + G + L+SN +A + W EV VR M+ G++K PG S +EV ++H
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHML 638
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGH--MEEHEEHD 571
+ DKSH Q I+ L KL +EM+ + + + + +++ EE D
Sbjct: 639 LAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQD 682
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A L +R H + ++ L D + T L+ YA A+ V + N+ ++
Sbjct: 27 ASLSQTR---QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVR 306
LI F++ L +M + G PD+ L SA+ ACA + LK + +HG +V
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
FD + + +S++ MY KC A +FD+M D++SW+ ++A+Y G +EA LF
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
+M ++ V+P+ ++ +++ +HSGL E F
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 300/542 (55%), Gaps = 1/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG I AR+LFE + R + ++NS++ AYS+ + E+L L M ED++PD
Sbjct: 188 MVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPD 247
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF AL A DL++G+ + ++ G D V S+++ LY++C ++ A F+
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFK 307
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KD+V W++MI+GLV N +A+ + +M + + + + ACA LG
Sbjct: 308 STTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+HGY +R+ + LD+ Q SLV MYAK L + +F M ++V+W A+++G A+
Sbjct: 368 GASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAK 427
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG + EM+ PDS+++ S L AC G L GK IH + +R ++
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMT 487
Query: 316 -TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY KCG A+ FD M RDL++W+ +I YG +G GE AL + + + T +
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGM 547
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+H F S+LSA SH GL+ +G ++ M +++ P +H AC+VDLL+RAG+V+EA
Sbjct: 548 EPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAY 607
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
M EP + V LL C + + +G+ +A+ + +L P D G ++N +A
Sbjct: 608 SFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMS 667
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V MR G+KK PG+S +EV+G F SH + E I+ +K L +R
Sbjct: 668 RWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVKALSKNIR 727
Query: 555 AI 556
+
Sbjct: 728 NL 729
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 229/441 (51%), Gaps = 6/441 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y I RK+F+ + R V + +II +YSR+ ++ QM + ++P
Sbjct: 90 LISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPT 149
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L + L + + + G+ +D+ + +SM+N+Y KCG++ +A FE
Sbjct: 150 SVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFE 206
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+V W+S+++ G E + + MK E I D+ + A A GD R
Sbjct: 207 SIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRL 266
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHG ++ LN+D V+++LV +Y + LD A VFK+ + ++V W A+ISG Q
Sbjct: 267 GKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQ 326
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N A L + +M +P + +L S L ACAQ+G +G SIHGY +R+ ++
Sbjct: 327 NDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPA 386
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++ MY+KC + ++F++M +DL+SWN I+A + +G+ + + F +M ++ +
Sbjct: 387 QNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFL 446
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD T SLL A +G + +G+ W V + + P +VD+ + G +E A
Sbjct: 447 RPDSITVTSLLQACGSAGALCQGK-WIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQ 505
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
K D M + L W L+ G
Sbjct: 506 KCFDCM-LQRDLVAWSTLIVG 525
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 223/447 (49%), Gaps = 8/447 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++NS++ S + + +VL Y M K + D+ TF KAC +L G + +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
V G +D ++GSS+++ Y K G ++ F+ M ++++V W+++I G A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+K+M++ GI V ++ L+ + L +H I D+ + S+V+MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLL---CLHCLIILHGFESDLALSNSMVNMY 192
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
K G + A +F+++ +IV+W +L+S +++ G L+LL M+ +PD +
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
SAL A A G L+LGK +HG ++ + + + ++++ +Y +C A +F +
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
D++ W +I+ + ++AL +F QMIE+ VKP +T AS L+A + G + G
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ + + + +V + A+ +++++ I + M E L W A+++G +
Sbjct: 373 GYVLRQGIMLDIPAQNS-LVTMYAKCNKLQQSCSIFNKM-VEKDLVSWNAIVAGHAKNGY 430
Query: 462 FSIGEKVAKKVLK--LNPDDLGIHALV 486
S G ++ K L PD + + +L+
Sbjct: 431 LSKGIFFFNEMRKSFLRPDSITVTSLL 457
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 163/340 (47%), Gaps = 2/340 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M+K L+ + ++ LY + A K+F+ + V + ++I + + +
Sbjct: 274 MLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKA 333
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LG++ QMI+ +V+P ++T L AC L +G I + G D+ +S++ +
Sbjct: 334 LGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTM 393
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC K+ ++ F KM KDLV W++++ G NG + + + M+K + D + +
Sbjct: 394 YAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITV 453
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+QAC G G +H + +R L + +T+LVDMY K G+L+ A F M +
Sbjct: 454 TSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQ 513
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V W LI G+ NG L E G EP+ V +S L AC+ G + G SI
Sbjct: 514 RDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSI 573
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ + F NL V+D+ S+ G A + + M
Sbjct: 574 YESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMM 613
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 289/495 (58%), Gaps = 5/495 (1%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + LY M++ PD+ +F LK+C SL G+++ + G + FV ++++
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDL--VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++Y KCG + +A FE+ + VC++++I+G N + +A ++RMK+ G+ D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
V M+GL+ C G S+HG ++ L+ +V V S + MY K G ++ +F
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M ++TW A+ISG++QNGLA LEL +M+S G PD +LVS L +CA +G K+
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 297 GKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G + G V F N+ + + I MY++CG + ARA+FD M + L+SW +I YG
Sbjct: 276 GHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG GE L LF MI+ ++PD + F +LSA SHSGL ++G F M +YK++P
Sbjct: 335 MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY+C+VDLL RAG ++EA++ ++SM EP AVW ALL C HK + E KV++
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
P+++G + L+SN ++ + E + +R MR+ +K PGYS VE G +H F+ D+
Sbjct: 455 FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDR 514
Query: 535 SHNQYEDIVYVLKKL 549
SH Q E++ +L +L
Sbjct: 515 SHEQTEEVHRMLDEL 529
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 29/350 (8%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ + L + E++ Y+ M + G D ++++CA L G +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGALISGFAQNGLAGST 262
+ + V T+L+ MY K G + A VF+ + + V + ALISG+ N
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDM 321
+ M+ G DSV+++ + C +L LG+S+HG V+ D + + S I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y KCG R LFD+M + LI+WN +I+ Y +G + L L+ QM + V PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 382 ASLLSALSHSG----------LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
S+LS+ +H G LVE + ++ VS I + AR G +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS-----------MYARCGNLA 309
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHN-HKKFSIGEKVAKKVLK--LNPD 478
+A + D M + L W A++ GC+ H IG + ++K + PD
Sbjct: 310 KARAVFDIMPVK-SLVSWTAMI-GCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 185/397 (46%), Gaps = 11/397 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++Y + ARK+FEE P + YN++I Y+ + ++ +M + V
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
DS T + C L +G + + V+ G ++V V +S + +Y+KCG +
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M K L+ W+++I+G NG + ++ Y++MK G+ D ++ ++ +CA LG
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G V +V V + + MYA+ G+L A VF M ++V+W A+I +
Sbjct: 274 KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G+ L L +M G PD V L AC+ G K + + + ++ L
Sbjct: 334 GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD--KGLELFRAMKREYKLE 391
Query: 314 LG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
G + ++D+ + G A + M D W ++ + IH + + A F +
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK 451
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
+IE +P++ + L+S + +EG + +M+
Sbjct: 452 VIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 12/256 (4%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L + + I +Y + + R+LF+E+P++G+ T+N++I YS+ ++VL
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
LY QM V PD T L +C L K+G E+ + G+ +VFV ++ +++Y
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+CG + +A F+ M K LV W++MI +G + + M K GI D V +
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVF 235
++ AC S GL+ G + R + + K++ + LVD+ + G LD A
Sbjct: 363 MVLSAC-----SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 236 KNMS-RINIVTWGALI 250
++M + WGAL+
Sbjct: 418 ESMPVEPDGAVWGALL 433
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 315/535 (58%), Gaps = 2/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A +F + ++NS++ + + E L Y++M +PD
Sbjct: 359 LIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 418
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A + G +I A++ G +D+ VG+S++++Y K M F+
Sbjct: 419 LVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM KD+V W+++I G NG A++ ++ ++ EGID D +++ ++ AC+ L
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 538
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H Y IR+ L+ D+ +Q +VD+Y + G++D A+ +F+ + ++V+W ++IS +
Sbjct: 539 VKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVH 597
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGLA LEL M+ G EPDS+SLVS L A A + LK GK IHG+ +R+ F L
Sbjct: 598 NGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSL 657
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY++CG +R +F+ ++++DL+ W +I +YG+HG G A+ LF +M + +
Sbjct: 658 ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 717
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH F ++L A SHSGL+ EGR + + M +Y+++P +HY C+VDLL RA +EEA
Sbjct: 718 APDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAY 777
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M EP VW ALL C H +GE A+K+L+++P++ G + LVSN +A E+
Sbjct: 778 QFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAER 837
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W++V VR M+ SG+KK PG S +EV ++H F+ DKSH Q +I L ++
Sbjct: 838 RWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQI 892
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 248/442 (56%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR-GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
I+ +Y ND+ AR+LF+ +P + V ++NS+I AYS E L L+ +M K + P
Sbjct: 257 IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP 316
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
++ TF AL+AC +K G I ++ Y +VFV ++++ +Y + GKM EA F
Sbjct: 317 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 376
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M D + W+SM++G V NG EA+ Y M+ G D V ++ +I A A G++
Sbjct: 377 YNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 436
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G+ +H Y+++ L+ D++V SLVDMYAK + +F M ++V+W +I+G A
Sbjct: 437 NGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHA 496
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QNG LEL E+Q G + D + + S LLAC+ + + K IH Y +R+ +LVL
Sbjct: 497 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVL 556
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++D+Y +CG A +F+ ++ +D++SW +I+ Y +G EAL LF M ET V
Sbjct: 557 QNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGV 616
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEA 433
+PD + S+LSA + +++G+ ++ K + ++ + + +VD+ AR G +E++
Sbjct: 617 EPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKS 674
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + + L +W ++++
Sbjct: 675 RNVFNFIRNK-DLVLWTSMINA 695
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 248/464 (53%), Gaps = 11/464 (2%)
Query: 1 MIKTNLSAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MI +N A NSV R++ +YG +V A KLF+ +P + + T+N++I AY P
Sbjct: 140 MITSN--ALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEP 197
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY +M + D+ TF LKAC L D + G E+ A++ GY + VFV +S+
Sbjct: 198 LGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSI 257
Query: 118 LNLYVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+ +Y KC +N A F++M +++D+V W+SMI+ NGQ EA+ + M+K + +
Sbjct: 258 VGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPN 317
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ +QAC D + G+ +H ++ ++V V +L+ MYA+ G + A+++F
Sbjct: 318 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 377
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
NM + ++W +++SGF QNGL L+ EM+ G +PD V+++S + A A+ G
Sbjct: 378 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLN 437
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G IH Y ++ D +L +G S++DMY+K +FD+M +D++SW IIA +
Sbjct: 438 GMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQ 497
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G AL LF ++ + D +S+L A S L+ + ++ K +
Sbjct: 498 NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQ 557
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ +VD+ G V+ A ++ + + + + W +++S C+ H
Sbjct: 558 N--GIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVH 597
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 3/318 (0%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
++ L+ C S L G+++ + N VF+ + ++ +Y KCG + +A F+
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M K + W++MI V NG+P +++ Y+ M+ GI D +++AC L D R G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGFAQ 255
VHG +I+ V V S+V MY K L+ A +F M + ++V+W ++IS ++
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG + L L EMQ P++ + V+AL AC F+K G IH ++ + N+ +
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++I MY++ G A +F M D ISWN +++ + +G EAL + +M +
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415
Query: 375 KPDHSTFASLLSALSHSG 392
KPD S+++A + SG
Sbjct: 416 KPDLVAVISIIAASARSG 433
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 313/588 (53%), Gaps = 32/588 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I L+A ++G++++L + D+ A LF+++P YN +I YS P +
Sbjct: 62 IILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKS 121
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ QM+ P+ TF LKAC + + +A++LG G V +++L
Sbjct: 122 LLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTA 181
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YV C + A F+ + + +V W+SMI G G EA+ ++ M + G++AD +
Sbjct: 182 YVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTL 241
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ L+ A + + G VH Y + + +D V +L+DMYAK GHL A HVF M
Sbjct: 242 VSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLD 301
Query: 241 INIVTWGALISGFAQNGLAGSTL-------------------------------ELLMEM 269
++V+W ++++ +A GL + + EL M
Sbjct: 302 KDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRM 361
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVP 328
G PD +LVS L C+ G L LGK H Y ++ L S+IDMY+KCG
Sbjct: 362 CISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGAL 421
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A +F M ++++SWNVII + +HG GEEA+ +F M + + PD TF LLSA
Sbjct: 422 QTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSAC 481
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
SHSGLV+ GRY+FD+M+S ++I P +HYACMVDLL R G + EA+ ++ M +P + V
Sbjct: 482 SHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVV 541
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
W ALL C + I +++ K++L+L + G++ L+SN ++ Q+W+++ +RK M
Sbjct: 542 WGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDD 601
Query: 509 SGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
SG+KK S +E++G + F+++DK H I +L +L ++++
Sbjct: 602 SGIKKCRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSV 649
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH I L V L+ + + G L A +F + + N + LI G++ +
Sbjct: 58 VHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSND 117
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+L L +M S G P+ + L ACA F +H ++ + + +
Sbjct: 118 PMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNA 177
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++ Y C + AR +FD + R ++SWN +IA Y G +EA+ LF +M++ V+ D
Sbjct: 178 ILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEAD 237
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T SLLSA S ++ GR+ L + ++ ++D+ A+ G ++ A +
Sbjct: 238 VFTLVSLLSASSKHCNLDLGRF-VHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVF 296
Query: 438 DSMSTEPGLAVWVALLSGCHNH 459
D M + + W ++++ N
Sbjct: 297 DQM-LDKDVVSWTSMVNAYANQ 317
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 308/535 (57%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I ++F+++ R V ++ +II E L +++M V D
Sbjct: 198 LIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYD 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF +ALKA L G+ I + ++ G+ FV +++ +Y KCGK + M FE
Sbjct: 258 SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFE 317
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ D+V W+++I V G+ AV+A+KRM+K + ++ +I ACA+L +++
Sbjct: 318 KMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKW 377
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ +R L + V S+V +Y+K+G L AS VF ++R +I++W +I+ ++Q
Sbjct: 378 GEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQ 437
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G A + L M+ G +P+ +L S L C + L+ GK +H + + D ++
Sbjct: 438 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMV 497
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++I MYSKCG A +F+ M+ ++ISW +I Y HG+ +EA++LF ++ +
Sbjct: 498 HSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGL 557
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD+ TF +L+A SH+G+V+ G Y+F LM ++Y+I P+++HY C++DLL RAG + EA
Sbjct: 558 KPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAE 617
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ SM VW LL C H G A+++L+L+P+ G H ++N +A +
Sbjct: 618 HMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKG 677
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W+E A +RK M+ G+ K G+S V VN +L+AF+ D++H Q E I VL+ L
Sbjct: 678 RWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELL 732
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 230/462 (49%), Gaps = 10/462 (2%)
Query: 23 KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTV 81
+ + +R +F+++ R ++ ++I Y +E L L++ M ++ ++ D +V
Sbjct: 103 QGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISV 162
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
ALKAC +++ GE + +V+ G N VFV S+++++Y+K GK+ + F+KM +++
Sbjct: 163 ALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRN 222
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+++I GLV G EA+ + M + D ++A AD G ++H
Sbjct: 223 VVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHT 282
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+I++ + V +L MY K G D +F+ M ++V+W LI+ + Q G
Sbjct: 283 QTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEH 342
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVID 320
+E M+ P+ + + + ACA + K G+ IHG+ +R + L + S++
Sbjct: 343 AVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVT 402
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
+YSK G+ A +F + +D+ISW+ IIA Y G+ +EA M KP+
Sbjct: 403 LYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFA 462
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+LS L+E+G+ V I ++ ++ + ++ G VEEA KI + M
Sbjct: 463 LSSVLSVCGSMALLEQGKQ-VHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGM 521
Query: 441 STEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPD 478
+ W A+++G H + ++ EK++ + L PD
Sbjct: 522 KIN-NIISWTAMINGYAEHGYSQEAINLFEKISS--VGLKPD 560
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 153/285 (53%), Gaps = 2/285 (0%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGI 173
+S L VK G++ ++ F+KM +D + W+++I G V EA+ + M + G+
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D+ ++ ++AC + FG +HG+S++ L V V ++L+DMY K G ++
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VFK M++ N+V+W A+I+G G L EM DS + AL A A
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L GK+IH T+++ FD + + ++ MY+KCG LF++M+ D++SW +I +
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITT 333
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
Y G E A+ F +M ++ V P+ TFA+++SA ++ + + G
Sbjct: 334 YVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWG 378
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 316/582 (54%), Gaps = 11/582 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M++T L S +I+A + AR +F ++P T NSII Y+ K P
Sbjct: 63 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 122
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ + Y M+ + + PD TF K+C L + G+++ + +LG+ +D ++ ++++
Sbjct: 123 QAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLM 179
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
N+Y CG + A F+KM K +V W++MI P EA+ ++RM+ + +E+
Sbjct: 180 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEI 239
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ ++ ACA D VH Y + + ++L+D+Y K G LA +F M
Sbjct: 240 TLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKM 299
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+ W +I+G ++ L L EMQ G + D V++ S L+AC +G L+LGK
Sbjct: 300 PEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK 359
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y + + + ++ LGT+++DMY+KCG A +F +M +D+++W +I + G
Sbjct: 360 WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCG 419
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
G +AL LF +M + VKPD TF +L+A SH+GLV EG +F+ M +KY IQP+ +HY
Sbjct: 420 QGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHY 479
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CMVD+L RAG + EA ++ +M P V V LLS C H + E+ A+++++L+P
Sbjct: 480 GCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDP 539
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ G + L+SN ++ + WE +R+ M + +KK PG S +EV G +H F+ D SH
Sbjct: 540 KNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHP 599
Query: 538 QYEDIVYVLKKLYLEMRAI-----SSWLQGHMEEHEEHDPLS 574
Q +I L + +++ S + M+E E+ + LS
Sbjct: 600 QSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELS 641
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 310/540 (57%), Gaps = 2/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA ++F ++ + ++NS++ Y + E + + +M++ +PD
Sbjct: 307 LLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPD 366
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A L L G E A++ D+ VG++++++Y+KCG + + FE
Sbjct: 367 HACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFE 426
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D + W++++ + + EA++ ++KEGI D +++ +++ C L
Sbjct: 427 SMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISL 486
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH Y+IR L LD+ ++ L+D+Y + G D + ++F+ + + +IV+W ++I+
Sbjct: 487 LKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTN 545
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG + L EMQ +PDSV+LVS L+A A + L GK +HG+ +RR F +
Sbjct: 546 NGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV 605
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S++DMYS CG + A +F++ + +D++ W +I + G+HGHG++A+ LF +M++T +
Sbjct: 606 VSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGL 665
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SHS LVEEG+++ D+MVSKY+++P ++HYAC+VD+L R+G+ EEA
Sbjct: 666 TPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAY 725
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + +M +P AVW ALL C H+ + + A K+L+L PD+ G + LVSN FA
Sbjct: 726 EFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMG 785
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW R M + G++K P S +E+ +H F D H E I L ++ +R
Sbjct: 786 KWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLR 845
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 240/497 (48%), Gaps = 37/497 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM---IKED 71
+++ +YG + AR+LF +P R V ++N+++ AY S E + +Y M
Sbjct: 100 KLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPG 159
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD T LKAC + D + G E+ AV++G V ++++ +Y KCG ++ A+
Sbjct: 160 SAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSAL 219
Query: 132 VAFEKMQR--KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
FE +Q+ +D+ W+S+++G V NG+ EA+ ++ M+ G + + ++Q CA+
Sbjct: 220 RVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAE 279
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LG G +H ++ L+++ LV MYAK G +D A VF ++ + ++W ++
Sbjct: 280 LGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISWNSM 338
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
+S + QN ++ EM GF+PD +VS A + L G+ H Y ++ R
Sbjct: 339 LSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRL 398
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+L +G +++DMY KCG C+ +F+ M RD ISW I+A + EAL + L+
Sbjct: 399 HTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILE 458
Query: 369 MIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+ + + D S+L H + G DL++
Sbjct: 459 LQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG--LLDLILENR--------- 507
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN- 476
++D+ GE + +L + + + + W ++++ C N+ + + + ++ K N
Sbjct: 508 --LIDIYGECGEFDHSLNLFQRVEKKD-IVSWTSMINCCTNNGRLNGAVFLFTEMQKANI 564
Query: 477 -PDDLGIHALVSNFFAM 492
PD + ALVS A+
Sbjct: 565 QPDSV---ALVSILVAI 578
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 248/480 (51%), Gaps = 17/480 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I +Y + SA ++FE L R V ++NS++ + E L L+ M
Sbjct: 205 LIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFP 264
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFV-GSSMLNLYVKCGKMNEAMV 132
+S T L+ C L L +G E+ A L G+++ + +++L +Y K G+++ A+
Sbjct: 265 MNSYTSVAVLQVCAELGLLSLGREL--HAALLKCGSELNIQCNALLVMYAKYGRVDSALR 322
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F ++ KD + W+SM++ V N EA+D + M + G D ++ L A L
Sbjct: 323 VFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSR 382
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G H Y+I++ L+ D++V +L+DMY K G ++ ++ VF++M + ++W +++
Sbjct: 383 LNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILAC 442
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
FAQ+ LE+++E+Q G DS+ + S L C + + L K +H Y +R +L
Sbjct: 443 FAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDL 502
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L +ID+Y +CG + LF +++ +D++SW +I +G A+ LF +M +
Sbjct: 503 ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKA 562
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQ-PTEKHYACMVDLLARAGEV 430
++PD S+L A++ + +G+ ++ + + I+ P + +VD+ + G +
Sbjct: 563 NIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV---VSSLVDMYSGCGSM 619
Query: 431 EEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALV 486
A+++ + + + +W A++ +G H H K +I + K++L+ L PD + AL+
Sbjct: 620 NYAIRVFERAKCKD-VVLWTAMINATGMHGHGKQAI--DLFKRMLQTGLTPDHVSFLALL 676
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 188/368 (51%), Gaps = 10/368 (2%)
Query: 95 GEEIWRKAVELGYGN---DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
G ++ AV G N D F+ + ++ +Y +CG++++A F M + + W++++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 152 LVFNGQPREAVDAYKRMKKE---GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ +G EA+ Y M+ G D + +++AC GD R G VHG +++ L
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR--INIVTWGALISGFAQNGLAGSTLELL 266
+ V +L+ MYAK G LD A VF+ + + ++ +W +++SG QNG L L
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCG 326
MQS GF +S + V+ L CA++G L LG+ +H ++ + +++ MY+K G
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYG 315
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
A +F Q+ +D ISWN +++ Y + EA+ F +M++ +PDH+ SL S
Sbjct: 316 RVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSS 375
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
AL H + GR F K ++ + ++D+ + G +E + K+ +SM +
Sbjct: 376 ALGHLSRLNNGRE-FHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434
Query: 447 AVWVALLS 454
+ W +L+
Sbjct: 435 S-WTTILA 441
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 297 GKSIHGYTVRRFDFNL----VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G+ +H + V N L T ++ MY +CG AR LF+ M +R + SWN ++ +
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 353 YGIHGHGEEALSLFLQMIETMVK---PDHSTFASLLSALSHSGLVEEGRYWFDL--MVSK 407
Y G EA+ ++ M + PD T AS+L A G +GR ++ + K
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEG---DGRCGGEVHGLAVK 192
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP-GLAVWVALLSGC 456
+ + ++ + A+ G ++ AL++ + + + +A W +++SGC
Sbjct: 193 VGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 314/542 (57%), Gaps = 7/542 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y N++ A+KLF LP + +YN+II+ Y+R + E LG++ + K + D +
Sbjct: 319 MYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVS 378
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+ A +AC + G ++ +++ +++ V +++L++Y KCG + EA + FE+M
Sbjct: 379 LSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV 438
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D V W+++I NG + + + M + G++ DE +++ACA G+
Sbjct: 439 SRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGME 498
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA---Q 255
+H I+ L LD V +L+DMY+K G ++ A + ++ +V+W A+ISGF+ Q
Sbjct: 499 IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQ 558
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ A T ++EM G +PD+ + + L CA + ++LGK IH +++ + +
Sbjct: 559 SEEAQKTFSKMLEM---GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYI 615
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMYSKCG + +F++ +RD ++WN ++ Y HG GEEAL +F M V
Sbjct: 616 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 675
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+H+TF ++L A H GLVE+G ++F M+S Y + P +HY+C+VD++ R+G+V +AL
Sbjct: 676 KPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKAL 735
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++++ M E +W LLS C H + EK A +L+L P+D + L+SN +A
Sbjct: 736 ELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAG 795
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W EV +RK MR +G+KK PG S +E+ E+HAF++ DK+H + ++I L L EM+
Sbjct: 796 MWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK 855
Query: 555 AI 556
+
Sbjct: 856 WV 857
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 257/464 (55%), Gaps = 5/464 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y G+ DI A+KLF+ +P R V ++NS+I Y +V+ ++ QM + D +TF
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
V LK+C SL D G +I AV++G+ DV GS++L++Y KC K++ ++ F M
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
K+ V WS++I G V N R ++ +K M+K G+ + + ++CA L R G +
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQL 297
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG++++ DV + T+ +DMY K +L A +F ++ N+ ++ A+I G+A++
Sbjct: 298 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG 357
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSV 318
L + +Q G D VSL A ACA I G +HG +++ N+ + ++
Sbjct: 358 IEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAI 417
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+DMY KCG A +F++M SRD +SWN IIA++ +G+ E+ LSLF+ M+++ ++PD
Sbjct: 418 LDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDE 477
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
T+ S+L A + + G + ++ K ++ ++D+ ++ G +E+A K+ D
Sbjct: 478 FTYGSVLKACAGWQALNCGMEIHNRII-KSRLGLDSFVGIALIDMYSKCGMMEKAEKLHD 536
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDL 480
++ E + W A++SG K+ +K K+L++ +PD+
Sbjct: 537 RLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 579
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 237/456 (51%), Gaps = 6/456 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + + + F +P + ++++II + + L L+ +M K V
Sbjct: 215 LLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS 274
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
STF ++C L L++G ++ A++ +G DV +G++ L++Y+KC +++A F
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +L ++++I G + + EA+ ++ ++K G+ DEV + G +ACA +
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VHG S++ ++ V +++DMY K G L A VF+ M + V+W A+I+ Q
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG TL L + M G EPD + S L ACA L G IH ++ R + +
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFV 514
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++IDMYSKCG+ A L D++ + ++SWN II+ + + EEA F +M+E V
Sbjct: 515 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 574
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD+ T+A++L ++ VE G+ ++ K ++Q + +VD+ ++ G +++
Sbjct: 575 DPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQD-F 632
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+++ + W A++ G H +GE+ K
Sbjct: 633 QLIFEKAPNRDFVTWNAMVCGYAQH---GLGEEALK 665
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 6/385 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +YG +V A +FEE+ R ++N+II A+ + + + L L+ M++ + PD
Sbjct: 417 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 476
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ LKAC L G EI + ++ G D FVG +++++Y KCG M +A +
Sbjct: 477 EFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHD 536
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + +V W+++I+G Q EA + +M + G+D D ++ CA+L
Sbjct: 537 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 596
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I++ L D + ++LVDMY+K G++ +F+ + VTW A++ G+AQ
Sbjct: 597 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 656
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--DFNLV 313
+GL L++ MQ +P+ + ++ L AC +G ++ G + + D L
Sbjct: 657 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 716
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ V+D+ + G S A L + M D + W +++ IHG+ E A +++
Sbjct: 717 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQ- 775
Query: 373 MVKPDHSTFASLLSAL-SHSGLVEE 396
++P+ S LLS + +++G+ E
Sbjct: 776 -LEPEDSAAYVLLSNIYANAGMWNE 799
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 212/464 (45%), Gaps = 53/464 (11%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
++R LF P+R + S +SPF+ L + + TF+ + C
Sbjct: 5 TSRHLF---PIRFFFNFQS--------KSPFKTLPISPFSSYQATPTKKKTFSHIFQECS 53
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC----------------------- 124
L G++ + + + VFV + ++ +Y+KC
Sbjct: 54 DRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNA 113
Query: 125 --------GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
G + A F+ M +D+V W+S+I+G + NG R+ +D + +M + G D
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFD 173
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++++C+ L D G+ +HG +++ + DV ++L+DMYAK LD + F
Sbjct: 174 RTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFH 233
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+M N V+W A+I+G QN LEL EMQ G + S +CA + L+L
Sbjct: 234 SMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRL 293
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G +HG+ ++ F ++V+GT+ +DMY KC S A+ LF+ + + +L S+N II Y
Sbjct: 294 GSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR 353
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
G EAL +F + ++ + D + + A + EG L V ++ +
Sbjct: 354 SDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG-----LQVHGLSMKSLCQ 408
Query: 416 HYAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
C ++D+ + G + EA + + M + ++ W A+++
Sbjct: 409 SNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS-WNAIIAA 451
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++ +Y ++ + +FE+ P R T+N+++ Y++ E
Sbjct: 604 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 663
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
L ++ M E+V+P+ +TF L+AC + ++ G + + YG D + S ++
Sbjct: 664 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLS-NYGLDPQLEHYSCVV 722
Query: 119 NLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVD-AYKRMKKEGIDAD 176
++ + G++++A+ E M D V W ++++ +G A AY ++ E D+
Sbjct: 723 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSA 782
Query: 177 EVVMMGLIQACADL 190
V++ I A A +
Sbjct: 783 AYVLLSNIYANAGM 796
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 312/519 (60%), Gaps = 10/519 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K + P S+F A+KAC SL D+ G++ +
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A GY +D+FV S+++ +Y CGK+ +A F+++ ++++V W+SMI G NG +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 161 AVDAYKRMKKEGIDADEVVM---MGL---IQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
AV +K + + D D+ + MGL I AC+ + S+H + I+R + V V
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 215 QTSLVDMYAKTGH--LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QS 271
+L+D YAK G + +A +F + + V++ +++S +AQ+G++ E+ + ++
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC 330
++++L + LLA + G L++GK IH +R + ++++GTS+IDMY KCG
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR FD+M+++++ SW +IA YG+HGH +AL LF MI++ V+P++ TF S+L+A SH
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL EG WF+ M ++ ++P +HY CMVDLL RAG +++A ++ M +P +W
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
+LL+ C HK + E ++ +L+ + G + L+S+ +A +W++V VR M+ G
Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRG 520
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ K PG+S++E+NGE+H F++ D+ H Q E I L +L
Sbjct: 521 LVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 178/353 (50%), Gaps = 23/353 (6%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + D+ W+S+I L +G EA+ A+ M+K + I+AC+ L D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
H + D+ V ++L+ MY+ G L+ A VF + + NIV+W ++I G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 257 GLAGSTLELLMEM------QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G A + L ++ DS+ LVS + AC+++ L +SIH + ++R FD
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 310 FNLVLGTSVIDMYSKCGVP--SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ +G +++D Y+K G + AR +FDQ+ +D +S+N I++ Y G EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 368 QMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++++ +V + T +++L A+SHSG + G+ D ++ + ++ ++D+ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIVGTSIIDMYCK 334
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNP 477
G VE A K D M + + W A+++ G H H A K L+L P
Sbjct: 335 CGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGH---------AAKALELFP 377
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 12/359 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + ARK+F+E+P R + ++ S+I Y + + + L+ ++ ++ D
Sbjct: 117 LIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDD 176
Query: 76 SSTF------TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ F + AC + + E I ++ G+ V VG+++L+ Y K G+
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 130 AMVA--FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQA 186
A+ F+++ KD V ++S+++ +G EA + ++R+ K + + + + + ++ A
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+ G R G +H IR L DV V TS++DMY K G ++ A F M N+ +W
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+I+G+ +G A LEL M G P+ ++ VS L AC+ G G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 307 RFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
RF L ++D+ + G A L +M+ + D I W+ ++A+ IH + E A
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 316/557 (56%), Gaps = 37/557 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F + + G+ YN +I A+++ S + + L+ Q+ +E + PD+ T+ KA
Sbjct: 85 AERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGC 144
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +++ GE+++ V+ G D +V +S++++Y + G++ FE+M ++D+V W+ +
Sbjct: 145 LGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVL 204
Query: 149 INGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I+G V + +AVD ++RM+++ + +E ++ + AC L G +H Y +R
Sbjct: 205 ISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY-VREQ 263
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL- 266
L +K+ +LVDMY K GHL +A +F +M ++ W +++SG+ G EL
Sbjct: 264 LGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFE 323
Query: 267 ------------------------------MEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
EMQ PD +LV+ L CAQ+G L+
Sbjct: 324 RSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQ 383
Query: 297 GKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GK IHGY + + V+GT++I+MY+KCG + +F+ ++ +D SW II +
Sbjct: 384 GKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAM 443
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G +AL LF +M++T VKPD TF +LSA SH GLVEEGR F M + Y+I+P +
Sbjct: 444 NGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLE 503
Query: 416 HYACMVDLLARAGEVEEALKIVD---SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
HY C++DLL RAG+++EA ++++ +++ E + ++ ALLS C H +GE+VAK++
Sbjct: 504 HYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRL 563
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+ + D +H L++N +A +WE+V VR+ M+ G+KKVPG S VEVNG +H F++
Sbjct: 564 VGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVG 623
Query: 533 DKSHNQYEDIVYVLKKL 549
D SH + +I +L +
Sbjct: 624 DASHPEMREIYSMLDSI 640
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 209/444 (47%), Gaps = 47/444 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC-----GKMNEAMVAFEKM 137
LK C S+ LK +I + + G+ G ++ V C G ++ A F +
Sbjct: 39 LKNCKSMQHLK---QIQTQILRTGFHQS---GDTLNKFMVCCTDPSIGNLHYAERIFNYI 92
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
L ++ +I NG R+AV ++++++EG+ D + +A LG+ R G
Sbjct: 93 DIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGE 152
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
V+G+ ++ L D V SL+DMYA+ G + VF+ M + ++V+W LISG+ +
Sbjct: 153 KVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCR 212
Query: 258 LAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGT 316
+++ M Q P+ ++VS L AC + L+LGK IH Y + F + +G
Sbjct: 213 RYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGN 272
Query: 317 SVIDMYSKCGVPSCARALFDQM-------------------------------QSRDLIS 345
+++DMY KCG S AR +F+ M RD++
Sbjct: 273 ALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVL 332
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I Y ++A++LF +M V PD T +LL+ + G +E+G+ W +
Sbjct: 333 WTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGK-WIHGYI 391
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ KI ++++ A+ G +E++L+I + + E A W +++ G + K S
Sbjct: 392 DENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLK-EKDTASWTSIICGLAMNGKTSKA 450
Query: 466 EKVAKKVLK--LNPDDLGIHALVS 487
++ ++++ + PDD+ ++S
Sbjct: 451 LELFAEMVQTGVKPDDITFIGVLS 474
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 167/329 (50%), Gaps = 31/329 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L ++ +Y + + R++FEE+P R V ++N +I Y + +
Sbjct: 158 VVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDA 217
Query: 61 LGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGY----GN----- 109
+ ++ +M ++ +RP+ +T L AC++L L++G+EI R E LG+ GN
Sbjct: 218 VDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDM 277
Query: 110 --------------------DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
V +SM++ YV CG+++EA FE+ +D+V W++MI
Sbjct: 278 YCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMI 337
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
NG V + +AV ++ M+ + + D ++ L+ CA LG G +HGY +
Sbjct: 338 NGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIM 397
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
+D V T+L++MYAK G ++ + +F + + +W ++I G A NG LEL EM
Sbjct: 398 IDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEM 457
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGK 298
G +PD ++ + L AC+ G ++ G+
Sbjct: 458 VQTGVKPDDITFIGVLSACSHGGLVEEGR 486
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 292/512 (57%), Gaps = 5/512 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + AR +F+ + R V ++N++I Y R + L +++ M+ E V D
Sbjct: 158 LLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLD 217
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C L DL+MG + + E G+ + V ++++N+Y+KCG+M+EA F+
Sbjct: 218 HATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFD 277
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+R+D++ W+ MING +G A++ + M+ EG+ + V + L+ C D
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+++R+ + D+ ++TSL+ MYAK +DL VF S+ + W A+I+G Q
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ 397
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L L L M+ EP+ +L S L A A + L+ +IH Y + F +L
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQ----SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
T ++ +YSKCG A +F+ +Q S+D++ W +I+ YG+HG G AL +F++M+
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V P+ TF S L+A SHSGLVEEG F M+ YK HY C+VDLL RAG +
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++ ++ EP VW ALL+ C H+ +GE A K+ +L P++ G + L++N +
Sbjct: 578 DEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
A +W+++ VR M G++K PG+S +E+
Sbjct: 638 AALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 227/437 (51%), Gaps = 9/437 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR--PDSSTFTVAL 83
I ARKLFEE+P + +YN +I Y R+ + + ++ +M+ E V+ PD T+
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KA L +K+G + + + +G D +V +++L +Y+ GK+ A F+ M+ +D++
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W++MI+G NG +A+ + M E +D D ++ ++ C L D G +VH
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ L ++V+ +LV+MY K G +D A VF M R +++TW +I+G+ ++G + L
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMY 322
EL MQ G P++V++ S + C + GK +HG+ VR+ + ++++ TS+I MY
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 323 SKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
+KC V C R +F W+ IIA + +AL LF +M V+P+ +T
Sbjct: 365 AKCKRVDLCFR-VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
SLL A + + + ++K + +V + ++ G +E A KI + +
Sbjct: 424 NSLLPAYAALADLRQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 442 TE---PGLAVWVALLSG 455
+ + +W AL+SG
Sbjct: 483 EKHKSKDVVLWGALISG 499
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 299/551 (54%), Gaps = 33/551 (5%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LFE + +N++I S SP + Y +M+ V P+S TF LK+C +
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM------------------------ 127
+ G++I ++LG +D FV +S++N+Y + G++
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207
Query: 128 -------NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
++A FE++ +D V W++MI G +G+ EA+ ++ MK+ + +E M
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ ACA G G V + L ++++ +L+DMY+K G LD A +F+ +
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I++W +I G++ L L +MQ EP+ V+ VS L ACA +G L LGK I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 301 HGYTVRRFD--FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H Y ++F N L TS+IDMY+KCG A+ +F M+ + L SWN +I+ +HGH
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
AL LF QM + +PD TF +LSA SH+GLVE GR F MV Y I P +HY
Sbjct: 448 ANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYG 507
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CM+DLL RAG +EA ++ +M +P A+W +LL C H +GE AK + +L P+
Sbjct: 508 CMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPE 567
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L+SN +A +W++VA +R + GMKKVPG S +EV+ +H F++ DK H Q
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQ 627
Query: 539 YEDIVYVLKKL 549
+DI +L ++
Sbjct: 628 SQDIYKMLDEI 638
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 194/353 (54%), Gaps = 4/353 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y + + AR+LFEE+P+R ++N++I Y++ E L + +M + +
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P+ ST L AC L++G + + G G+++ + ++++++Y KCG +++A
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE + KD++ W+ MI G +EA+ +++M++ ++ ++V + ++ ACA LG
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 192 DSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G +H Y ++ L L + + TSL+DMYAK G+++ A VF M ++ +W A+I
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
SG A +G A LEL +M+ GFEPD ++ V L AC+ G ++LG+ V +D
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 311 NLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGE 360
+ L +ID+ + G+ A AL M+ + D W ++ + +HG+ E
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 219/441 (49%), Gaps = 40/441 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV--KCGKMNEAMVAFEKMQRK 140
L C S +LK +I + ++ G N F S ++ G ++ A++ FE +++
Sbjct: 39 LSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ W++MI G + P A+D Y RM G++ + L+++CA +G ++ G +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGH-------------------------------LD 229
G+ ++ L D V TSL++MYA+ G LD
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A +F+ + + V+W A+I+G+AQ+G L EM+ P+ ++V+ L ACA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
Q G L+LG + + NL L ++IDMYSKCG AR LF+ + +D+ISWNV
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I Y +EAL+LF +M ++ V+P+ TF S+L A ++ G ++ G++ + K+
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ ++D+ A+ G +E A ++ M + L W A++SG H ++ ++
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALEL 454
Query: 469 AKKVLK--LNPDDLGIHALVS 487
+++ PDD+ ++S
Sbjct: 455 FRQMRDEGFEPDDITFVGVLS 475
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 318/580 (54%), Gaps = 49/580 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
++A+Y + ARK+F+E+P+ V ++NSII +Y++ P L ++++M E RP
Sbjct: 168 LVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRP 227
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T L C S+ +G++ AV ++FVG+ ++++Y K G M+EA F
Sbjct: 228 DDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVF 287
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE----------------------- 171
M KD+V W++M+ G G+ +AV +++M++E
Sbjct: 288 SNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 172 ------------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-------DV 212
GI +EV ++ ++ CA +G G +H Y+I+ ++L +
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDEN 407
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLELLMEM- 269
V L+DMYAK +D+A +F ++S ++VTW +I G++Q+G A LELL EM
Sbjct: 408 MVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 270 -QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCG 326
+ C P++ ++ AL+ACA + L +GK IH Y +R + L + +IDMY+KCG
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR +FD M ++ ++W ++ YG+HG+GEEAL +F +M K D T +L
Sbjct: 528 DIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLY 587
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSG++++G +F+ M + + + P +HYAC+VDLL RAG + AL++++ M EP
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VWVALLS C H K +GE AKK+ +L ++ G + L+SN +A +W++V +R M
Sbjct: 648 VVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLM 707
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
R G+KK PG S VE F + DK+H ++I VL
Sbjct: 708 RHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 246/515 (47%), Gaps = 67/515 (13%)
Query: 1 MIKTNLSAYG----NSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRK 54
+I L ++G N +I+ Y + A L P GV +NS+I +Y
Sbjct: 46 LIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNN 105
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
+ L + M PD+ TF KAC + ++ G+ + G+ ++VFVG
Sbjct: 106 GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVG 165
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GI 173
++++ +Y +CG +++A F++M D+V W+S+I G+P+ A++ + +M E G
Sbjct: 166 NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D++ ++ ++ CA +G G HG+++ + ++ V LVDMYAK G +D A+
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANT 285
Query: 234 VFKNMS-----------------------------------RINIVTWGALISGFAQNGL 258
VF NM ++++VTW A ISG+AQ GL
Sbjct: 286 VFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---------RFD 309
L + +M S G +P+ V+L+S L CA +G L GK IH Y ++ D
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGD 405
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+V+ +IDMY+KC ARA+FD + + RD+++W V+I Y HG +AL L
Sbjct: 406 ENMVI-NQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 368 QMIE--TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-----CM 420
+M E +P+ T + L A + + G+ + Y ++ + C+
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALSIGK-----QIHAYALRNQQNAVPLFVSNCL 519
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+D+ A+ G++ +A + D+M E W +L++G
Sbjct: 520 IDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTG 553
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 146/309 (47%), Gaps = 9/309 (2%)
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNGLAGSTLELLM 267
L + + + L+ Y G L A + + S + W +LI + NG A L
Sbjct: 57 LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFC 116
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCG 326
M S + PD+ + AC +I ++ G S H + V F N+ +G +++ MYS+CG
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCG 176
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFASLL 385
S AR +FD+M D++SWN II SY G + AL +F +M E +PD T ++L
Sbjct: 177 SLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVL 236
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ G G+ + V+ IQ C+VD+ A+ G ++EA + +M +
Sbjct: 237 PPCASVGTRSLGKQFHGFAVTSEMIQNMFVG-NCLVDMYAKFGMMDEANTVFSNMPVK-D 294
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
+ W A+++G +F ++ +++ K+ D + A +S +A E GV
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISG-YAQRGLGYEALGVC 353
Query: 504 KTMRKSGMK 512
+ M SG+K
Sbjct: 354 RQMLSSGIK 362
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 326/602 (54%), Gaps = 50/602 (8%)
Query: 6 LSAYGNS--VGRIIALYGGKNDIVSARKLFEEL--------PLRGVDTYNSIIIAYSRKE 55
LS++ S + R++A + +D S R L L P YN+ A S
Sbjct: 37 LSSHSTSPFIDRLVAAFA-HSDPASPRPLLHALAILASLPSPPDSAFPYNAAFRALSLCP 95
Query: 56 SPFEV----LGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND 110
V L LY ++ RPD TF +KAC L G + +LG+ D
Sbjct: 96 HQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSAD 155
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
VFV ++ ++ + G M A F++ +D+V W+++I G V +G PREA++ + R+ +
Sbjct: 156 VFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAE 215
Query: 171 EG--IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+G + DEV ++G + CA +GD G +H + + + V++ +++DMY K G L
Sbjct: 216 DGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSL 275
Query: 229 DLASHVFKNMSRINIVTW-------------------------------GALISGFAQNG 257
+LA+ VF+ +S V+W AL++G+ QN
Sbjct: 276 ELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNK 335
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGT 316
+ L EMQ +P+ +++V+ L AC+Q+G L++G +H Y R + ++ LGT
Sbjct: 336 QGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGT 395
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S++DMY+KCG A +F+++ ++ ++W +I HGH +EA+ F +MI+ ++P
Sbjct: 396 SLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQP 455
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D TF +LSA H+GLVE GR +F LM +KY ++ KHY+CM+DLL RAG ++EA ++
Sbjct: 456 DEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQL 515
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKW 496
V++M +P VW AL C H ++GEK A K+++L+P D GI+ L++N +A
Sbjct: 516 VNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMR 575
Query: 497 EEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
++ VR MR G++KVPG S +E+NG +H FI++DKSH I L ++ L+MR I
Sbjct: 576 KKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRHI 635
Query: 557 SS 558
++
Sbjct: 636 AN 637
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 192/399 (48%), Gaps = 39/399 (9%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K SA V + + + + AR+LF+E P+R V ++N++I Y R P E L
Sbjct: 149 KLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALE 208
Query: 63 LYNQMIKED--VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ ++ ++ VRPD T A+ C + DL++G+ + G V + ++++++
Sbjct: 209 LFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDM 268
Query: 121 YVKCGK-------------------------------MNEAMVAFEKMQRKDLVCWSSMI 149
YVKCG M +A + F++M +D+ W++++
Sbjct: 269 YVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALM 328
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
G V N Q +EA+ + M+K +D +E+ M+ L+ AC+ LG G+ VH Y R L+
Sbjct: 329 AGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLH 388
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
L V + TSLVDMYAK G++ A VF + N +TW ++I G A +G A +E M
Sbjct: 389 LSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRM 448
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGV 327
G +PD ++ + L AC G ++ G+ ++ + + +ID+ + G
Sbjct: 449 IDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGH 508
Query: 328 PSCARALFDQMQ-SRDLISWNVIIASYGIHGH---GEEA 362
A L + M D + W + + +HG+ GE+A
Sbjct: 509 LDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKA 547
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 308/554 (55%), Gaps = 1/554 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK SA I+ +Y + +V AR+ F LP V N++++ R E L
Sbjct: 264 IKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEAL 323
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M + + D + + AC + G ++ A++ G+ DV V +++L+LY
Sbjct: 324 QLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLY 383
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC + EA + F++M+++D V W+++I L N + + M + G++ D+
Sbjct: 384 GKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYG 443
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+++ACA L +G VHG +I+ L LD V +++VDMY K G + A + +
Sbjct: 444 SVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQ 503
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+V+W ++ISGF+ N + + EM G +PD + + L CA + ++LGK IH
Sbjct: 504 ELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIH 563
Query: 302 GYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G +++ + + ++++DMY+KCG + +F++ Q D +SWN +I Y +HG G
Sbjct: 564 GQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGF 623
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL +F +M + V P+H+TF ++L A SH GL+++G +F LM S+YK++P +H+ACM
Sbjct: 624 EALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACM 683
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VD+L R+ +EALK + SM E +W LLS C + + E A VL+L+PDD
Sbjct: 684 VDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDS 743
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYE 540
++ L+SN +A KW +V+ R+ MR+ +KK PG S +EV E+H F+ DK H +
Sbjct: 744 SVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSR 803
Query: 541 DIVYVLKKLYLEMR 554
++ +L L +EM+
Sbjct: 804 EVYEMLNNLIVEMK 817
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 233/455 (51%), Gaps = 3/455 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + ++ +YG + A + F + R ++ + I + E L
Sbjct: 163 VKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGL 222
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ QM + + + ++C ++ L ++ A++ + D VG++++++Y
Sbjct: 223 ELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVY 282
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K + +A AF + + ++M+ GLV G EA+ ++ M + GI D V +
Sbjct: 283 AKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLS 342
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G+ ACA++ GL VH +I+ ++DV V+ +++D+Y K L A VF+ M +
Sbjct: 343 GVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 402
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V+W A+I+ QN T+ L EM G EPD + S L ACA + L+ G +H
Sbjct: 403 DSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVH 462
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G ++ + + ++V+DMY KCG+ + A+ L D++ ++L+SWN II+ + ++ E
Sbjct: 463 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSE 522
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EA F +M++ VKPDH T+A++L ++ +E G+ ++ K ++ E + +
Sbjct: 523 EAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQII-KQEMLGDEYISSTL 581
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
VD+ A+ G + ++L + + + + W A++ G
Sbjct: 582 VDMYAKCGNMPDSLLMFEK-AQKLDFVSWNAMICG 615
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 233/467 (49%), Gaps = 7/467 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y D +A LF +P V ++N+++ Y ++ + +GL +M + V PD
Sbjct: 76 MLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPD 135
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T V LKAC L DL +G +I AV+ G DV GS+++++Y KC + +A+ F
Sbjct: 136 RTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFH 195
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V W + I G V N Q ++ + +M++ G+ + + ++CA +
Sbjct: 196 GMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLST 255
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H ++I+ + D V T++VD+YAK L A F ++ + A++ G +
Sbjct: 256 ARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVR 315
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVRR-FDFNLV 313
GL L+L M G D VSL ACA++ G+L+ G +H ++ FD ++
Sbjct: 316 TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQ-GLQVHCLAIKSGFDVDVC 374
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++D+Y KC A +F +M+ RD +SWN IIA+ + E+ ++ +M+
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYG 434
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD T+ S+L A + +E G + K + + +VD+ + G + EA
Sbjct: 435 MEPDDFTYGSVLKACAGLQSLEYGSVVHGKAI-KSGLGLDAFVSSTVVDMYCKCGMITEA 493
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPD 478
K+ D + + L W +++SG +K+ +K ++L + PD
Sbjct: 494 QKLHDRIGGQE-LVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPD 539
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 172/378 (45%), Gaps = 13/378 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ML Y G A F M D+V W+++++G G R++V M
Sbjct: 69 DTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMA 128
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ D + L++AC L D G+ +H +++ L +DV+ ++LVDMY K L+
Sbjct: 129 RRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLE 188
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A F M N V+WGA I+G QN LEL ++MQ G + S +CA
Sbjct: 189 DALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCA 248
Query: 290 QIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
I L + +H + ++ +F + V+GT+++D+Y+K AR F + + + + N
Sbjct: 249 AITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNA 308
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
++ G G EAL LF M + + D + + + SA + E Y L V
Sbjct: 309 MMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACA-----EVKGYLQGLQVHCL 363
Query: 409 KIQPTEKHYAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
I+ C ++DL + + EA + M ++ W A+++ ++ +
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS-WNAIIAALEQNECYED 422
Query: 465 GEKVAKKVLK--LNPDDL 480
++L+ + PDD
Sbjct: 423 TIAYLNEMLRYGMEPDDF 440
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 36/212 (16%)
Query: 288 CAQIG--FLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
CA G L G++ H V F + ++ MY++CG + AR +FD M RD +
Sbjct: 12 CAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTV 71
Query: 345 SWNVIIASYGIHGHGEEALSLF-------------------------------LQMIETM 373
SWN ++ +Y G A SLF ++M
Sbjct: 72 SWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRG 131
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V PD +T A LL A + G + V K ++ + + +VD+ + +E+A
Sbjct: 132 VAPDRTTLAVLLKACGGLEDLALGVQIHAVAV-KTGLEMDVRAGSALVDMYGKCRSLEDA 190
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
L+ M ++ W A ++GC +++++ G
Sbjct: 191 LRFFHGMGERNSVS-WGAAIAGCVQNEQYTRG 221
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 300/542 (55%), Gaps = 1/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG I AR+LF+ + R + ++NS++ AYS+ + E+L L M ED++PD
Sbjct: 188 MVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPD 247
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF AL A DL++G+ + ++ G D V S+++ LY++C ++ A F+
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFK 307
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KD+V W++MI+GLV N +A+ + +M + + + + ACA LG
Sbjct: 308 STTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+HGY +R+ + LD+ Q SLV MYAK L + +F M ++V+W A+++G A+
Sbjct: 368 GASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAK 427
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG + EM+ PDS+++ S L AC G L GK IH + +R ++
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMT 487
Query: 316 -TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++DMY KCG A+ FD M RDL++W+ +I YG +G GE AL + + + T +
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGM 547
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+H F S+LSA SH GL+ +G ++ M +++ P +H AC+VDLL+RAG+V+EA
Sbjct: 548 EPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAY 607
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
M EP + V LL C + + +G+ +A+ + +L P D G ++N +A
Sbjct: 608 SFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMS 667
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V MR G+KK PG+S +EV+G F SH + E I+ +K L +R
Sbjct: 668 RWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVKALSKNIR 727
Query: 555 AI 556
+
Sbjct: 728 NL 729
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 229/441 (51%), Gaps = 6/441 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y I RK+F+ + R V + +II +YSR+ ++ QM + ++P
Sbjct: 90 LISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPT 149
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L + L + + + G+ +D+ + +SM+N+Y KCG++ +A F+
Sbjct: 150 SVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQ 206
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+V W+S+++ G E + + MK E I D+ + A A GD R
Sbjct: 207 SIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRL 266
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHG ++ LN+D V+++LV +Y + LD A VFK+ + ++V W A+ISG Q
Sbjct: 267 GKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQ 326
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N A L + +M +P + +L S L ACAQ+G +G SIHGY +R+ ++
Sbjct: 327 NDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPA 386
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++ MY+KC + ++F++M +DL+SWN I+A + +G+ + + F +M ++ +
Sbjct: 387 QNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFL 446
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD T SLL A +G + +G+ W V + + P +VD+ + G +E A
Sbjct: 447 RPDSITVTSLLQACGSAGALCQGK-WIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQ 505
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
K D M + L W L+ G
Sbjct: 506 KCFDCM-LQRDLVAWSTLIVG 525
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 223/447 (49%), Gaps = 8/447 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++NS++ S + + +VL Y M K + D+ TF KAC +L G + +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
V G +D ++GSS+++ Y K G ++ F+ M ++++V W+++I G A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+K+M++ GI V ++ L+ + L +H I D+ + S+V+MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLL---CLHCLIILHGFESDLALSNSMVNMY 192
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
K G + A +F+++ +IV+W +L+S +++ G L+LL M+ +PD +
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
SAL A A G L+LGK +HG ++ + + + ++++ +Y +C A +F +
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
D++ W +I+ + ++AL +F QMIE+ VKP +T AS L+A + G + G
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ + + + +V + A+ +++++ I + M E L W A+++G +
Sbjct: 373 GYVLRQGIMLDIPAQNS-LVTMYAKCNKLQQSCSIFNKM-VEKDLVSWNAIVAGHAKNGY 430
Query: 462 FSIGEKVAKKVLK--LNPDDLGIHALV 486
S G ++ K L PD + + +L+
Sbjct: 431 LSKGIFFFNEMRKSFLRPDSITVTSLL 457
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 163/340 (47%), Gaps = 2/340 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M+K L+ + ++ LY + A K+F+ + V + ++I + + +
Sbjct: 274 MLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKA 333
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LG++ QMI+ +V+P ++T L AC L +G I + G D+ +S++ +
Sbjct: 334 LGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTM 393
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC K+ ++ F KM KDLV W++++ G NG + + + M+K + D + +
Sbjct: 394 YAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITV 453
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+QAC G G +H + +R L + +T+LVDMY K G+L+ A F M +
Sbjct: 454 TSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQ 513
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V W LI G+ NG L E G EP+ V +S L AC+ G + G SI
Sbjct: 514 RDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSI 573
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ + F NL V+D+ S+ G A + + M
Sbjct: 574 YESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMM 613
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 316/546 (57%), Gaps = 10/546 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
+I +Y ++ A ++F+EL + T++S++ + + SP++ + + +M+ DV P
Sbjct: 83 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 142
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T + AC L + ++G + + G+ ND+ + +S+LN Y K EA+ F
Sbjct: 143 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 202
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ + KD++ WS++I V NG EA+ + M +G + + ++ ++QACA D
Sbjct: 203 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 262
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G H +IR+ L +VKV T+LVDMY K + A VF + R ++V+W ALISGF
Sbjct: 263 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 322
Query: 255 QNGLAGSTLE----LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
NG+A ++E +L+E + PD++ +V L +C+++GFL+ K H Y ++ FD
Sbjct: 323 LNGMAHRSIEEFSIMLLENNT---RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 379
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N +G S++++YS+CG A +F+ + +D + W +I YGIHG G +AL F M
Sbjct: 380 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 439
Query: 370 IETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+++ VKP+ TF S+LSA SH+GL+ EG F LMV+ Y++ P +HYA +VDLL R G
Sbjct: 440 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVG 499
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+++ A++I M P + LL C H+ + E VAKK+ +L + G + L+SN
Sbjct: 500 DLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSN 559
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+ ++ +WE V +R ++++ G+KK S++E+ ++H F+ +D+ H + E + +LK+
Sbjct: 560 VYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 619
Query: 549 LYLEMR 554
L L M+
Sbjct: 620 LDLHMK 625
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 248/429 (57%), Gaps = 10/429 (2%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R + +N+++ + SR++ EVL ++ M +++ +PD+ T VALKAC L ++ GE I
Sbjct: 4 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 63
Query: 99 W---RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+K V LG +D++VGSS++ +Y+KCG+M EA+ F+++++ D+V WSSM++G N
Sbjct: 64 HGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 121
Query: 156 GQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
G P +AV+ ++RM + D V ++ L+ AC L +SR G VHG+ IRR + D+ +
Sbjct: 122 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 181
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
SL++ YAK+ A ++FK ++ ++++W +I+ + QNG A L + +M G
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
EP+ +++ L ACA L+ G+ H +R+ + + + T+++DMY KC P A A
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 301
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKPDHSTFASLLSALSHSG 392
+F ++ +D++SW +I+ + ++G ++ F + ++E +PD +L + S G
Sbjct: 302 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 361
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E+ + F V KY A +V+L +R G + A K+ + ++ + + VW +L
Sbjct: 362 FLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV-VWTSL 419
Query: 453 LSGCHNHKK 461
++G H K
Sbjct: 420 ITGYGIHGK 428
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 172/323 (53%), Gaps = 7/323 (2%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M ++ L W++++ L Q E + + M ++ D + ++AC +L + +G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 197 LSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+HG+ +++ + L D+ V +SL+ MY K G + A +F + + +IVTW +++SGF
Sbjct: 61 EMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 119
Query: 255 QNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+NG +E M + PD V+L++ + AC ++ +LG+ +HG+ +RR F +L
Sbjct: 120 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L S+++ Y+K A LF + +D+ISW+ +IA Y +G EAL +F M++
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+P+ +T +L A + + +E+GR +L + K ++ K +VD+ + EE
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEE 298
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + + + + WVAL+SG
Sbjct: 299 AYAVFSRIPRK-DVVSWVALISG 320
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 187/379 (49%), Gaps = 7/379 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ Y A LF+ + + V +++++I Y + + E L ++N M+ +
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+ +T L+AC + DL+ G + A+ G +V V ++++++Y+KC EA
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 301
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLG 191
F ++ RKD+V W ++I+G NG +++ + M E D ++M+ ++ +C++LG
Sbjct: 302 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 361
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
H Y I+ + + + SLV++Y++ G L AS VF ++ + V W +LI+
Sbjct: 362 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 421
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RF 308
G+ +G LE M +S +P+ V+ +S L AC+ G + G I V R
Sbjct: 422 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRL 481
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFL 367
NL ++D+ + G A + +M S ++ + IH +GE A ++
Sbjct: 482 APNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAK 541
Query: 368 QMIETMVKPDHSTFASLLS 386
++ E ++ +H+ + L+S
Sbjct: 542 KLFE--LESNHAGYYMLMS 558
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 312/543 (57%), Gaps = 35/543 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR + ++ P ++NS+I AY+ SP L LY +M++ +P + TF LKAC +
Sbjct: 46 ARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACST 105
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L + GE+I + LG+G+D+FV +S++++Y KC +++ A ++ M +D V W+S+
Sbjct: 106 LGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSI 165
Query: 149 INGLVFNGQPREAVDAYKRMK----------------KEG-------------IDADEV- 178
I+G V GQ +A D ++ M KEG + ADEV
Sbjct: 166 ISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQ 225
Query: 179 ----VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
M+ L+ AC+ L + G + + + L+ + T+L+DMY+K G ++ A +
Sbjct: 226 PNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRI 285
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F +S N+ +W A+I+G Q GL ++L M++ +P+ ++LV+ L ACA +G L
Sbjct: 286 FDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGAL 345
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+LG+ +H Y R D N++L T+++DMY+KCG A +F + +D+ WN +I
Sbjct: 346 ELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGL 405
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
HG G ++L++F QM+ V+P+ TF +LSA +HSGLVEEGR F M K+ + P
Sbjct: 406 AYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPK 465
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
+HYACMVDLL RAG ++EA ++V +M P +W ALLS C H+ + +K+++ ++
Sbjct: 466 LEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIM 525
Query: 474 KLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
++G L+SN +A +W++VA VR+ +++ +KK G S VEV+G +H F++ED
Sbjct: 526 ASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVED 585
Query: 534 KSH 536
+H
Sbjct: 586 TTH 588
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 189/364 (51%), Gaps = 20/364 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPL-RGVDTYNSIIIAYSRKESPFEVLGLYNQMI-- 68
S II+ Y + AR LFEE+P+ R V + ++I Y ++ E+L L+ QM+
Sbjct: 161 SWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVS 220
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
++V+P+++T L AC +L + ++G ++ ++ N + V ++++++Y KCG
Sbjct: 221 ADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPL-NTILV-TALIDMYSKCGD 278
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +A F+ + K+L W+++I G V G EA+D Y+ MK + + +E+ ++ ++ A
Sbjct: 279 VEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSA 338
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA LG G VH Y R L+L+V + T+LVDMYAK G +D A +F S ++ W
Sbjct: 339 CAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALW 398
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK-------S 299
A+I G A +G +L + +M G +P+ V+ + L AC G ++ G+
Sbjct: 399 NAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMAD 458
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGH 358
HG + + + ++D+ + G A L M D I W ++++ IH +
Sbjct: 459 KHGLSPKLEHY-----ACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRN 513
Query: 359 GEEA 362
E A
Sbjct: 514 LELA 517
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H ++ L L + L+D+++ +D A V +W +LI + +G
Sbjct: 18 IHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHGS 73
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
++L L ++M +P + + L AC+ +G + G+ IH + +R F +L + S
Sbjct: 74 PQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNS 133
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY------------------------ 353
+IDMY KC AR +D M RD +SWN II+ Y
Sbjct: 134 LIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVC 193
Query: 354 ---GIHGHGEEA-----LSLFLQMIETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
I+G+G+E LSLF QM+ + V+P+ +T LLSA S E GR+ +
Sbjct: 194 WTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRF-LSV 252
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+ KI ++D+ ++ G+VE+A +I D +S + L W A+++GC
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK-NLPSWNAIITGC 304
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 298/528 (56%), Gaps = 1/528 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + AR+LF+ +P + T+N +I Y + E L+++MI ++PD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF+ L L+ G+EI + G DVF+ S+++++Y KC + A F+
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V ++MI+G V NG A++ ++ + +E + A+ V + ++ ACA L
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ ++ V ++++DMYAK G LDLA F +S + V W ++I+ +Q
Sbjct: 469 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ 528
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG ++L +M G + D VS+ +AL ACA + L GK IH + +R F +L
Sbjct: 529 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 588
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMYSKCG A +FD M+ ++ +SWN IIA+YG HG +++L+LF M+ +
Sbjct: 589 ESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 648
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PDH TF +++SA H+G V+EG ++F M + I +HYACMVDL RAG + EA
Sbjct: 649 QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAF 708
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++SM P VW LL C H + E ++ + L+P + G + L+SN A
Sbjct: 709 GMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAG 768
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+WE V +R M++ G++KVPG S ++VN H F+ D+SH Q I
Sbjct: 769 QWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQI 816
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 223/450 (49%), Gaps = 7/450 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ +Y + A+ +F +L L + +N +I ++ L Y +M+ P
Sbjct: 86 KLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLP 145
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF +KAC L + +G + K +G+ DVFVGSS++ Y + G +++A F
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLF 205
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD V W+ M+NG V NG A + M++ + + V ++ CA
Sbjct: 206 DRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMIN 265
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +HG + L +D V +L+ MYAK GHL A +F M + ++VTW +ISG+
Sbjct: 266 FGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYV 325
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG L EM S +PDS++ S L ++ L+ GK IH Y +R ++
Sbjct: 326 QNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVF 385
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L +++ID+Y KC AR +FDQ D++ +I+ Y ++G AL +F +++
Sbjct: 386 LKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 445
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVE 431
++ + T AS+L A + + G+ +L K Y + ++D+ A+ G ++
Sbjct: 446 MRANSVTLASVLPACAGLAALTLGK---ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLD 502
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
A + +S + + W ++++ C + K
Sbjct: 503 LAHQTFIGISDKDAVC-WNSMITSCSQNGK 531
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 177/374 (47%), Gaps = 3/374 (0%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C L G + + + G G + +G+ +L +YV CG +A F +++
Sbjct: 53 LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCS 112
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+ MI G GQ A+ Y +M G D+ +I+AC L G VH
Sbjct: 113 EPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDK 172
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
LDV V +SL+ Y++ G + A ++F M + V W +++G+ +NG +
Sbjct: 173 IQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNA 232
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
+ MEM+ P+SV+ L CA + G +HG V + + + +++ M
Sbjct: 233 TGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAM 292
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG AR LFD M DL++WN +I+ Y +G +EA LF +MI +KPD TF
Sbjct: 293 YAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITF 352
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+S L LS + +G+ + + + + ++D+ + +VE A KI D
Sbjct: 353 SSFLPLLSEGATLRQGKE-IHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQ-R 410
Query: 442 TEPGLAVWVALLSG 455
T + V A++SG
Sbjct: 411 TPVDIVVCTAMISG 424
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++Q C D G H + + + + T L+ MY G A ++F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
W +I GF G L +M CG PD + + AC + + LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 300 IHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H F+ ++ +G+S+I YS+ G AR LFD+M S+D + WNV++ Y +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+ A +F++M T P+ TFA +LS + ++ G L+VS ++
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS-GLEMDSPVAN 287
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + A+ G + +A ++ D M + L W ++SG
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMP-KTDLVTWNGMISG 323
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 316/546 (57%), Gaps = 10/546 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
+I +Y ++ A ++F+EL + T++S++ + + SP++ + + +M+ DV P
Sbjct: 102 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T + AC L + ++G + + G+ ND+ + +S+LN Y K EA+ F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ + KD++ WS++I V NG EA+ + M +G + + ++ ++QACA D
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G H +IR+ L +VKV T+LVDMY K + A VF + R ++V+W ALISGF
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 255 QNGLAGSTLE----LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
NG+A ++E +L+E + PD++ +V L +C+++GFL+ K H Y ++ FD
Sbjct: 342 LNGMAHRSIEEFSIMLLENNT---RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 398
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N +G S++++YS+CG A +F+ + +D + W +I YGIHG G +AL F M
Sbjct: 399 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 458
Query: 370 IETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+++ VKP+ TF S+LSA SH+GL+ EG F LMV+ Y++ P +HYA +VDLL R G
Sbjct: 459 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVG 518
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+++ A++I M P + LL C H+ + E VAKK+ +L + G + L+SN
Sbjct: 519 DLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSN 578
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+ ++ +WE V +R ++++ G+KK S++E+ ++H F+ +D+ H + E + +LK+
Sbjct: 579 VYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 638
Query: 549 LYLEMR 554
L L M+
Sbjct: 639 LDLHMK 644
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 256/441 (58%), Gaps = 10/441 (2%)
Query: 27 VSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC 86
V AR++F E+ R + +N+++ + SR++ EVL ++ M +++ +PD+ T VALKAC
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 87 VSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
L ++ GE I +K V LG +D++VGSS++ +Y+KCG+M EA+ F+++++ D+V
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 144 CWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
WSSM++G NG P +AV+ ++RM + D V ++ L+ AC L +SR G VHG+
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
IRR + D+ + SL++ YAK+ A ++FK ++ ++++W +I+ + QNG A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L + +M G EP+ +++ L ACA L+ G+ H +R+ + + + T+++DM
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKPDHST 380
Y KC P A A+F ++ +D++SW +I+ + ++G ++ F + ++E +PD
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+L + S G +E+ + F V KY A +V+L +R G + A K+ + +
Sbjct: 369 MVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 441 STEPGLAVWVALLSGCHNHKK 461
+ + + VW +L++G H K
Sbjct: 428 ALKDTV-VWTSLITGYGIHGK 447
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 187/379 (49%), Gaps = 7/379 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ Y A LF+ + + V +++++I Y + + E L ++N M+ +
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+ +T L+AC + DL+ G + A+ G +V V ++++++Y+KC EA
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 320
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLG 191
F ++ RKD+V W ++I+G NG +++ + M E D ++M+ ++ +C++LG
Sbjct: 321 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 380
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
H Y I+ + + + SLV++Y++ G L AS VF ++ + V W +LI+
Sbjct: 381 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 440
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RF 308
G+ +G LE M +S +P+ V+ +S L AC+ G + G I V R
Sbjct: 441 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRL 500
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFL 367
NL ++D+ + G A + +M S ++ + IH +GE A ++
Sbjct: 501 APNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAK 560
Query: 368 QMIETMVKPDHSTFASLLS 386
++ E ++ +H+ + L+S
Sbjct: 561 KLFE--LESNHAGYYMLMS 577
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 296/535 (55%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + AR++F+ L R V T+N +I Y++ + L+ +M +E +P+
Sbjct: 203 LVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPN 262
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+F L C + L G+ + + + G +DV V ++++ +Y+ CG + A F+
Sbjct: 263 RISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFD 322
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ +D+V W+ MI G N +A + M++EGI D + + +I ACA D
Sbjct: 323 KMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSL 382
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H +R D+ V T+LV MYAK G + A VF MSR ++V+W A+I + +
Sbjct: 383 AREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVE 442
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG E M+ EPD V+ ++ L AC +G L LG I+ ++ ++ +
Sbjct: 443 NGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPV 502
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+M K G AR +F+ M RD+++WNV+I Y +HG+ EAL LF +M++
Sbjct: 503 GNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERF 562
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF +LSA S +G VEEGR +F ++ I PT + Y CMVDLL RAGE++EA
Sbjct: 563 RPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAE 622
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ M +P ++W LL+ C + + E+ A++ L P D ++ +S+ +A
Sbjct: 623 LLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAG 682
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
WE VA VRK M G++K G + +EV G+LH F++ED+SH Q +I L +L
Sbjct: 683 MWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARL 737
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 238/480 (49%), Gaps = 44/480 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I L+ +++ AR+ F+ + + V T+N+II Y++ E L+ QM+ E + P
Sbjct: 102 LIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + L AC S LK+G+E + +++G+ +D +G++++++YVK G M+ A F+
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD 221
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++D+ ++ MI G +G +A + RM++EG + + + ++ C+ +
Sbjct: 222 GLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAW 281
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +VH + L DV+V T+L+ MY G ++ A VF M ++V+W +I G+A+
Sbjct: 282 GKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L MQ G +PD ++ + + ACA L L + IH VR F +L++
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++ MY+KCG AR +FD M RD++SW+ +I +Y +G GEEA F M V
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461
Query: 375 KPDHSTFASLLSALSH-----------------------------------SGLVEEGRY 399
+PD T+ +LL+A H G +E RY
Sbjct: 462 EPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARY 521
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGC 456
F+ MV + + + M+ + G EAL + D M E P +V +LS C
Sbjct: 522 IFENMVQRDVVT-----WNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSAC 576
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 203/399 (50%), Gaps = 30/399 (7%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS T+ + C+ L D +G+++ ++ G +++ ++++ L+ CG M EA F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ ++ K +V W+++I G G +EA +++M E ++ + + ++ AC+ +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G H I+ D ++ T+LV MY K G +D A VF + + ++ T+ +I G+A
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV- 313
++G +L MQ GF+P+ +S +S L C+ L GK++H + + V
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ T++I MY CG AR +FD+M+ RD++SW V+I Y + + E+A LF M E
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG 359
Query: 374 VKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
++PD T+ +++A + HS +V G + DL+V +V
Sbjct: 360 IQPDRITYIHIINACASSADLSLAREIHSQVVRAG-FGTDLLVD-----------TALVH 407
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALL-----SGC 456
+ A+ G +++A ++ D+MS + W A++ +GC
Sbjct: 408 MYAKCGAIKDARQVFDAMSRRD-VVSWSAMIGAYVENGC 445
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 37/357 (10%)
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
+F GQ A D R+ + D + L Q C L D+ G V + I+ L++
Sbjct: 38 IFTGQV-GANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNI 96
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
+L+ +++ G++ A F ++ +VTW A+I+G+AQ G L +M
Sbjct: 97 YELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE 156
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCA 331
EP ++ + L AC+ LKLGK H ++ F + +GT+++ MY K G A
Sbjct: 157 AMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGA 216
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-- 389
R +FD + RD+ ++NV+I Y G GE+A LF +M + KP+ +F S+L S
Sbjct: 217 RQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTP 276
Query: 390 --------------HSGLVEEGRYWFDLM---------------VSKYKIQPTEKHYACM 420
++GLV++ R L+ K K++ + M
Sbjct: 277 EALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVS-WTVM 335
Query: 421 VDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ A +E+A + +M E P ++ +++ C + S+ ++ +V++
Sbjct: 336 IRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVR 392
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 327/619 (52%), Gaps = 63/619 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMIK--- 69
++A+Y + A +F+E+ +G+D ++NSI+ A+ + +P L L+++M
Sbjct: 190 LVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVH 249
Query: 70 ---EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ R D + L AC SL L +EI A+ G D FV +++++ Y KCG
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGS 309
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD---------- 176
M +A+ F M+ KD+V W++M+ G +G+ A + +K M+KE I D
Sbjct: 310 MKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAG 369
Query: 177 -------------------------EVVMMGLIQACADLGDSRFGLSVHGYSIRRHL--- 208
V ++ L+ ACA LG G+ H YS+++ L
Sbjct: 370 YAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSL 429
Query: 209 ---------NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI--NIVTWGALISGFAQNG 257
D+ V +L+DMY+K A +F ++ R N+VTW +I G+AQ G
Sbjct: 430 DNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYG 489
Query: 258 LAGSTLELLMEMQSCGFE--PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---L 312
+ L+L EM S + P++ ++ L+ACA + L++GK IH Y R ++
Sbjct: 490 DSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVY 549
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +IDMYSKCG AR +FD M R+ +SW +++ YG+HG G+EAL +F +M +
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKA 609
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD +F LL A SHSG+V++G +FD+M S Y + + +HYAC++DLLAR+G +++
Sbjct: 610 GFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDK 669
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K + M EP A+WVALLS C H + E K++ + ++ G + L+SN +A
Sbjct: 670 AWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYAT 729
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++W++VA +R+ M+KSG+KK PG S V+ +F + D+SH +I +L++L
Sbjct: 730 ARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGR 789
Query: 553 MRAISSWLQGHMEEHEEHD 571
++ + + + H+ D
Sbjct: 790 IKVMGYVPETNFALHDVDD 808
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 233/492 (47%), Gaps = 65/492 (13%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+G+ +M++ +PD T ALKAC L + G G+ ++VFV ++++
Sbjct: 132 RAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALV 191
Query: 119 NLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRM------K 169
+Y + G + +A + F+++ RK D++ W+S++ V PR A+D + M K
Sbjct: 192 AMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEK 251
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+D + ++ ++ ACA L +H Y+IR D V +L+D YAK G +
Sbjct: 252 ATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMK 311
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS------------------ 271
A +VF M ++V+W A+++G+ Q+G G+ EL M+
Sbjct: 312 DAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYA 371
Query: 272 -----------------CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN--- 311
G EP+SV+++S L ACA +G L G H Y++++ +
Sbjct: 372 QRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDN 431
Query: 312 ----------LVLGTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHG 359
LV+ ++IDMYSKC AR +F+ + + R++++W V+I Y +G
Sbjct: 432 DFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDS 491
Query: 360 EEALSLFLQMIET--MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+AL LF +MI V P+ T + +L A +H + G+ + ++ + +
Sbjct: 492 NDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFV 551
Query: 418 A-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
A C++D+ ++ G+V+ A + DSM ++ W +++SG H + + K+ K
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Query: 477 --PDDLGIHALV 486
PDD+ L+
Sbjct: 611 FVPDDISFLVLL 622
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 154/330 (46%), Gaps = 45/330 (13%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+ ++ Y+ CG ++A+ E++ V W+ ++ + G+ A+ RM + G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
D + ++AC +L R G + HG +V V +LV MY+++G L+ AS
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 233 HVFKNMSRI---NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE------PDSVSLVS 283
VF ++R ++++W ++++ + + L+L EM + E D +S+V+
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L ACA + L K IH Y +R F + + ++ID Y+KCG A +F+ M+ +D
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 343 LISWN-----------------------------------VIIASYGIHGHGEEALSLFL 367
++SWN +IA Y G+G+EAL F
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEG 397
QMI +P+ T SLLSA + G + +G
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQG 414
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 286/482 (59%), Gaps = 1/482 (0%)
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
R D +T L A L +LK+G +I A++ G+ + V + + +++L+ KCG++ A +
Sbjct: 28 RFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARL 87
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F ++++KDL+ ++MI+G NG+ ++V +K + G ++GLI + G
Sbjct: 88 LFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGH 147
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
S +HG+ ++ + V T+L +Y + + A +F + + +W A+ISG
Sbjct: 148 SYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISG 207
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFN 311
QNGL + + L MQ P+ V++ S L ACAQIG L LG+ +H RF+ N
Sbjct: 208 CTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESN 267
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + T++IDMY+KCG + AR LFD M ++ ++WN +I+ YG+HGHG+EAL LF M+
Sbjct: 268 VYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLS 327
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ VKP TF S+L A SH+GLV+EG F MV + +P +HYACMVD+L RAG+++
Sbjct: 328 SSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLK 387
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+AL+ + +M EPG VW ALL C HK ++ ++K+ +L+P+++G + L+SN ++
Sbjct: 388 KALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYS 447
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+E+K+ + A VR+ +K + K PG +++E+ H F D+SH Q + I L KL
Sbjct: 448 VERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTG 507
Query: 552 EM 553
+M
Sbjct: 508 KM 509
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 10/255 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K + ++ + + +Y N+++ AR+LF+E + + ++N++I ++ +
Sbjct: 159 VKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAI 218
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M K +V P+ T T L AC + L +GE + + ++V+V ++++++Y
Sbjct: 219 SLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMY 278
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + A F+ M K+ V W++MI+G +G +EA+ + M + + +
Sbjct: 279 AKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFL 338
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++ AC+ GD F VH + + +VD+ + G L A K
Sbjct: 339 SVLYACSHAGLVKEGDGIFHTMVHDFGFEPL----AEHYACMVDILGRAGQLKKALEFIK 394
Query: 237 NMS-RINIVTWGALI 250
M WGAL+
Sbjct: 395 AMPVEPGPPVWGALL 409
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 313/546 (57%), Gaps = 10/546 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP 74
+I +Y + A ++F EL + T++S++ + + SP++ + + +M DV P
Sbjct: 83 LIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTP 142
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T + AC L + ++G + + G+ ND+ + +S+LN Y K EA+ F
Sbjct: 143 DRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 202
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M KD++ WS++I V NG EA+ + M +G + + ++ ++QACA D
Sbjct: 203 KMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLE 262
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G H +IR+ L +VKV T+LVDMY K + A VF + + ++V+W ALISGF
Sbjct: 263 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFT 322
Query: 255 QNGLAGSTLE----LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
NG+A ++E +L+E + PD++ ++ L +C+++GFLK + H Y ++ FD
Sbjct: 323 LNGMAHRSIEEFSIMLLENNT---RPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFD 379
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N +G S++++YS+CG A +F+++ +D + W +I YGIHG G +AL F M
Sbjct: 380 SNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHM 439
Query: 370 IETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+ + VKP+ TF S+LSA SH+GL+ EG F+LMV+ Y++ P +HYA +VDLL R G
Sbjct: 440 VRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVG 499
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
E++ A++I M P + LL C H+ + E VAK++ +L + G + L+SN
Sbjct: 500 ELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSN 559
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+ ++ +WE V +R ++++ G+KK S++E+ ++H F+ +D H + E + +LK+
Sbjct: 560 MYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHPEKEPVYGLLKE 619
Query: 549 LYLEMR 554
L L M+
Sbjct: 620 LDLHMK 625
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 247/429 (57%), Gaps = 10/429 (2%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R + +N+++ + SR + +V+ ++QM +++ +PD+ T VALKAC L ++K GE I
Sbjct: 4 RTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMI 63
Query: 99 ---WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+K V LG +D++VGSS++ +YVKCG+M EA+ F ++++ D+V WSSM++G N
Sbjct: 64 HGFLKKNVTLG--SDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKN 121
Query: 156 GQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
G P +AV+ ++RM + D V ++ L+ AC L +SR G VHG+ +RR + D+ +
Sbjct: 122 GSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSL 181
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
SL++ YAK+ A ++FK M+ ++++W +I+ + QNG A L + EM G
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGT 241
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
EP+ +++ L ACA L+ G+ H +R+ + + + T+++DMY KC P A A
Sbjct: 242 EPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 301
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKPDHSTFASLLSALSHSG 392
+F ++ +D++SW +I+ + ++G ++ F + ++E +PD +L + S G
Sbjct: 302 VFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELG 361
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+++ F V KY A +V+L +R G + A K+ + ++ + + VW +L
Sbjct: 362 FLKQAE-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTV-VWTSL 419
Query: 453 LSGCHNHKK 461
++G H K
Sbjct: 420 ITGYGIHGK 428
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 176/323 (54%), Gaps = 7/323 (2%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M ++ L W++++ L + + + + +M ++ D + ++AC +L + ++G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 197 LSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+HG+ +++++ L D+ V +SL+ MY K G + A +F + + +IVTW +++SGF
Sbjct: 61 EMIHGF-LKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFE 119
Query: 255 QNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+NG +E M + PD V+L++ + AC ++ +LG+ +HG+ +RR F +L
Sbjct: 120 KNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDL 179
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L S+++ Y+K A LF M +D+ISW+ +IA Y +G EAL +F +MI+
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDD 239
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+P+ +T +L A + + +E+GR +L + K ++ K +VD+ + EE
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEE 298
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + + + + WVAL+SG
Sbjct: 299 AYAVFSRIPKK-DVVSWVALISG 320
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 190/381 (49%), Gaps = 7/381 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ Y A LF+ + + V +++++I Y + + E L ++N+MI +
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGT 241
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+ +T L+AC + DL+ G + A+ G +V V ++++++Y+KC EA
Sbjct: 242 EPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 301
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLG 191
F ++ +KD+V W ++I+G NG +++ + M E D ++M+ ++ +C++LG
Sbjct: 302 VFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELG 361
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ H Y I+ + + + SLV++Y++ G L AS VF ++ + V W +LI+
Sbjct: 362 FLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLIT 421
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RF 308
G+ +G LE M +S +P+ V+ +S L AC+ G + G I V R
Sbjct: 422 GYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRL 481
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFL 367
NL ++D+ + G A + +M S ++ + IH +GE A ++
Sbjct: 482 APNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAK 541
Query: 368 QMIETMVKPDHSTFASLLSAL 388
Q+ E ++ +H+ + L+S +
Sbjct: 542 QLFE--LESNHAGYYMLMSNM 560
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 305/540 (56%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + AR++F+E+ + + ++ +I +Y+ + E L ++QM +P+
Sbjct: 87 LIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPN 146
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF LKAC+ L + G+ + ++ Y D++VG +L LY +CG ++A AF
Sbjct: 147 NFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFG 206
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + D++ WS MI+ +GQ +A++ + +M++ + ++ ++QA AD+
Sbjct: 207 DMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDL 266
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
++HG++++ L+ DV V +L+ YAK G ++ + +F+ +S N V+W +I + Q
Sbjct: 267 SKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQ 326
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G L L M + V+ S L ACA + L+LG +H T + + ++ +
Sbjct: 327 LGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAV 386
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++IDMY+KCG AR +FD + RD +SWN II Y +HG G EA+ +F M ET
Sbjct: 387 GNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKC 446
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF +LSA S++G ++EG+ +F M Y I+P +HY CMV L+ R+G +++A+
Sbjct: 447 KPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAV 506
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K ++ + EP + +W ALL C H +G A++VL+L P D H L+SN +A +
Sbjct: 507 KFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARAR 566
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W VA VRK M++ G+KK PG S +E G +H F + D SH + I +L+ L ++ R
Sbjct: 567 RWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTR 626
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 234/466 (50%), Gaps = 14/466 (3%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
+F+E+P R ++ ++I Y++ E L+ ++ E + FT LK VS+
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
++G + +++GYG++ F+G+++++ Y G ++ A F+++ KD+V W+ MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
N EA++ + +M+ G + G+++AC L + G +VH ++ + D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V L+++Y + G D A F +M + +++ W +IS FAQ+G + LE+ +M+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC 330
P+ + S L A A I L L K+IHG+ ++ ++ + +++ Y+KCG
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+ LF+ + R+ +SWN II SY G GE ALSLF M+ V+ T++S+L A +
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+E G L Q A ++D+ A+ G +++A + D + ++ W
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNA-LIDMYAKCGSIKDARFMFDMLDLRDKVS-WN 419
Query: 451 ALLSGCHNHKKFSIGEKVAK-----KVLKLNPDDL---GIHALVSN 488
A++ G H +G + K K K PD+L G+ + SN
Sbjct: 420 AIICGYSMH---GLGVEAIKMFNLMKETKCKPDELTFVGVLSACSN 462
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 137/257 (53%), Gaps = 1/257 (0%)
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F++M ++ V + ++I+G + + EA + + R+ EG + + V +++ +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G VHG ++ + + T+L+D Y+ +G + +A VF +S ++V+W +I+
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+A+N LE +M+ GF+P++ + L AC + GK++H ++ ++
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L +G ++++Y++CG A F M D+I W+ +I+ + G E+AL +F QM
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 371 ETMVKPDHSTFASLLSA 387
V P+ TF+S+L A
Sbjct: 241 RAFVIPNQFTFSSVLQA 257
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 312/555 (56%), Gaps = 27/555 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + +AR LF+E+P+R + ++N++I Y + + E L L N + D
Sbjct: 124 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD---- 179
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC D G I +++ G ++ L C K+ F+
Sbjct: 180 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE---------LLRDCQKV------FD 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +DL+ W+S+I N QP A+ ++ M+ I D + ++ L + LGD R
Sbjct: 225 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 284
Query: 196 GLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
SV G+++R+ L D+ + ++V MYAK G +D A VF + ++++W +ISG+A
Sbjct: 285 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 344
Query: 255 QNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG A +E+ M+ G + + VS L AC+Q G L+ G +HG ++ ++
Sbjct: 345 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 404
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ TS+ DMY KCG A +LF Q+ + + WN +IA +G HGHGE+A+ LF +M++
Sbjct: 405 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 464
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPDH TF +LLSA SHSGLV+EG++ F++M + Y I P+ KHY CMVD+ RAG++E
Sbjct: 465 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 524
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
ALK + SMS +P ++W ALLS C H +G+ ++ + ++ P+ +G H L+SN +A
Sbjct: 525 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 584
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KWE V +R G++K PG+S +EV+ ++ F +++H YE++ L L +
Sbjct: 585 AGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAK 644
Query: 553 MRAISSWLQGHMEEH 567
++ I G++ +H
Sbjct: 645 LKMI-----GYVPDH 654
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 238/479 (49%), Gaps = 66/479 (13%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ-MIKEDVRPDSSTFTVALKACVSLMD 91
F+ + R V +N +I Y R + EV+ ++ M+ + PD TF LKAC +++D
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 101
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
G +I A++ G+ DV+V +S+++LY + + A + F++M +D+ W++MI+G
Sbjct: 102 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
+G +EA+ ++ D V ++ L+ AC + GD G+++H YSI+ L +
Sbjct: 159 YCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 214
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ L VF M ++++W ++I + N + L EM+
Sbjct: 215 L---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 259
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPS 329
+PD ++L+S +Q+G ++ +S+ G+T+R+ F ++ +G +V+ MY+K G+
Sbjct: 260 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 319
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSAL 388
ARA+F+ + + D+ISWN II+ Y +G EA+ ++ M E + + T+ S+L A
Sbjct: 320 SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 379
Query: 389 SHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI-- 436
S +G + +G + D+ V + D+ + G +E+AL +
Sbjct: 380 SQAGALRQGMKLHGRLLKNGLYLDVFV-----------VTSLADMYGKCGRLEDALSLFY 428
Query: 437 -VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVA---KKVLK--LNPDDLGIHALVS 487
+ +++ P W L++ G H H GEK K++L + PD + L+S
Sbjct: 429 QIPRVNSVP----WNTLIACHGFHGH-----GEKAVMLFKEMLDEGVKPDHITFVTLLS 478
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 175/393 (44%), Gaps = 57/393 (14%)
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDAD 176
++ +V M F+ +Q +D+ W+ MI+G G E + + M G+ D
Sbjct: 26 VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+++AC + D G +H +++ DV V SL+ +Y++ + A +F
Sbjct: 86 YRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 142
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M ++ +W A+ISG+ Q+G A L L +++ DSV++VS L AC + G
Sbjct: 143 EMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNR 198
Query: 297 GKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
G +IH Y+++ G ++ C + +FD+M RDLISWN II +Y ++
Sbjct: 199 GVTIHSYSIKH-------GLES-ELLRDC------QKVFDRMYVRDLISWNSIIKAYELN 244
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---------WF------ 401
A+SLF +M + ++PD T SL S LS G + R WF
Sbjct: 245 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 304
Query: 402 ----DLMVSKYKIQPTEK------------HYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+M +K + + + + ++ A+ G EA+++ + M E
Sbjct: 305 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 364
Query: 446 LA----VWVALLSGCHNHKKFSIGEKVAKKVLK 474
+A WV++L C G K+ ++LK
Sbjct: 365 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 397
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 217/693 (31%), Positives = 341/693 (49%), Gaps = 115/693 (16%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELP----------------------- 37
MI + G+ + R++ +Y +++V AR+LFEE+P
Sbjct: 39 MIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELG 98
Query: 38 ----------LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA-- 85
+R YN++I Y+ L L+ M ++D RPD TFT L A
Sbjct: 99 REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158
Query: 86 ----------------------CVSLMDLKMGEEIW-RKAVELGYG-------------- 108
CVS L ++ ++A ELG
Sbjct: 159 LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEM 218
Query: 109 --NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
D ++M+ YV+ +N A FE M W++MI+G V G +EA+ +
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD----VKVQTSLVDMY 222
+M+ GI D++ +I ACA++G + G +H Y ++ LN + + V +L+ +Y
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGA-------------------------------LIS 251
K +D A +F M NI+TW A +IS
Sbjct: 339 CKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G AQNG L+L +M+ GFEP + AL AC+ +G L+ G+ +H V ++
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L +G ++I MY+KCGV A ++F M S DL+SWN +IA+ G HGHG +A+ LF QM+
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V PD TF ++L+A SH+GLVE+GR++F+ M+ Y I P E HYA MVDL RAG
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
A ++DSM ++PG VW ALL+GC H +G + A+++ KL P + G + L+SN +
Sbjct: 579 SYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIY 638
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A +W +VA VRK MR ++K P S +EV ++H F+++D H + + L++L
Sbjct: 639 ADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLG 698
Query: 551 LEMRAI-----SSWLQGHMEEHEEHDPLSTAAQ 578
LEM+ + + ++ ME ++ LST ++
Sbjct: 699 LEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSE 731
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 329/624 (52%), Gaps = 70/624 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKE----- 55
+IK+ ++ R+I +YG + ARKLF+ + R + ++NSII A+++
Sbjct: 45 IIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDA 104
Query: 56 -------------------SPFEVLGLYN-------QMIKEDVRPDSSTFTVALKACVSL 89
S FE G ++ QM + +F AL AC L
Sbjct: 105 VHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGL 164
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
DLK+G +I Y +DV++GS+++++Y KCG++ A F++M + V W+S+I
Sbjct: 165 QDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLI 224
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR-RHL 208
NG EA+ + M K G++ DEV + ++ ACA + + G +H ++
Sbjct: 225 TCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEF 284
Query: 209 NLDVKVQTSLVDMYAKTGHLD-------------------------------LASHVFKN 237
D+ + +L+DMYAK ++ +A ++F N
Sbjct: 285 RNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSN 344
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M +++TW ALI+G QNG L L ++ P + + L ACA + L+LG
Sbjct: 345 MMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLG 404
Query: 298 KSIHGYTVR---RF----DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
+ H + ++ RF D ++ +G S+IDMY KCG +F M +D +SWN +I
Sbjct: 405 RQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMI 464
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
Y +G G +AL +F +M+E+ PDH T +L A SH+GL++EGRY+F M +++ +
Sbjct: 465 VGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGL 524
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P + HY CMVDLL RAG +EEA +++ MS +P VW +LL+ C H+ +GE V K
Sbjct: 525 MPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVK 584
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
K+L+++P++ G + L+SN +A + W+ V VRK MR+ G+ K PG S +E+ GEL+ F+
Sbjct: 585 KLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFM 644
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMR 554
++DK H + ++I VL+ + +M+
Sbjct: 645 VKDKRHARKKEIYMVLRTILQQMK 668
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 207/450 (46%), Gaps = 70/450 (15%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK-------- 126
DSS F+ L C + + ++ + ++ F+ + ++++Y KCG
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 127 -----------------------MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+++A+ FEKM + D W+SMI+G +G+ EA+
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ +M G +E + ACA L D + G +H R + DV + ++LVDMY+
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G ++ A VF M+ + V+W +LI+ + QNG L++ +EM CG EPD V+L S
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
Query: 284 ALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
+ ACA I +K G+ IH V+ F +L+LG +++DMY+KC + AR +FD M R
Sbjct: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
Query: 342 -------------------------------DLISWNVIIASYGIHGHGEEALSLFLQMI 370
D+I+WN +IA +G EEAL LF +
Sbjct: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLK 377
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYA----CMVDLLA 425
V P H TF +LL+A ++ ++ GR ++ ++ Q E ++D+
Sbjct: 378 RESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYM 437
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G VE ++ M E W A++ G
Sbjct: 438 KCGSVENGCRVFQHM-LEKDCVSWNAMIVG 466
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 32/307 (10%)
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY--- 222
K +K + + D L+ CA +R VH I+ + +Q L+D+Y
Sbjct: 8 KHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKC 67
Query: 223 ----------------------------AKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
K+G LD A H+F+ M +++ +W ++ISGF
Sbjct: 68 GCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFE 127
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
Q+G L +M GF + S SAL ACA + LKLG IH R + ++
Sbjct: 128 QHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVY 187
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G++++DMYSKCG A+++FD+M R +SWN +I Y +G +EAL +F++MI+
Sbjct: 188 MGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCG 247
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+PD T AS++SA + ++EG+ +V + + ++D+ A+ + EA
Sbjct: 248 VEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEA 307
Query: 434 LKIVDSM 440
I D M
Sbjct: 308 RIIFDMM 314
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 311/544 (57%), Gaps = 2/544 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+ LY ++ KLF+++ R + ++ SII ++ E L + QM E
Sbjct: 115 HFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIA 174
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ L+AC SL ++ G ++ V+ G+G ++FVGS++ ++Y KCG++++A AF
Sbjct: 175 TQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAF 234
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+M KD V W+SMI+G V NG ++A+ AY +M + + D+ V+ + AC+ L S
Sbjct: 235 EEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASS 294
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR-INIVTWGALISGF 253
FG S+H ++ + + +L DMY+K+G + AS+VF+ S I+IV+ A+I G+
Sbjct: 295 FGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGY 354
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+ L ++++ G EP+ + S + ACA L+ G +HG V+ F +
Sbjct: 355 VEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDP 414
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++DMY KCG+ + LFD++++ D I+WN ++ + HG G A+ F MI
Sbjct: 415 FVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHR 474
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+ TF +LL SH+G+VE+G +F M Y + P E+HY+C++DLL RAG+++E
Sbjct: 475 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKE 534
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++M EP + W + L C H + A K++KL P++ G H L+SN +A
Sbjct: 535 AEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAK 594
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E++WE+V +RK ++ M K+PGYS V++ + H F +ED SH Q ++I L L +
Sbjct: 595 EKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQ 654
Query: 553 MRAI 556
++ I
Sbjct: 655 IKRI 658
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 192/382 (50%), Gaps = 6/382 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T ++ +L G+++ + G + F+ + LNLY KCG+++ + F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+KM ++++V W+S+I G N + +EA+ ++ +M+ EG A + + ++QAC LG +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG VH ++ ++ V ++L DMY+K G L A F+ M + V W ++I GF
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFV 253
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+NG L M+M + D L S L AC+ + GKS+H ++ F++
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR--DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G ++ DMYSK G A +F Q+ S ++S II Y E+ALS F+ +
Sbjct: 314 IGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++P+ TF SL+ A ++ +E G +V K+ + + +VD+ + G +
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVV-KFNFKRDPFVSSTLVDMYGKCGLFD 431
Query: 432 EALKIVDSMSTEPGLAVWVALL 453
++++ D + P W L+
Sbjct: 432 HSIQLFDEIEN-PDEIAWNTLV 452
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 35/337 (10%)
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+D + LIQ A + G +H IR + + +++Y+K G LD +
Sbjct: 73 SDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKL 132
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F MS+ N+V+W ++I+GFA N L +M+ G +L S L AC +G +
Sbjct: 133 FDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ G +H V+ F L +G+++ DMYSKCG S A F++M +D + W +I +
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFD 402
+G ++AL+ +++M+ V D S LSA S H+ +++ G +
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312
Query: 403 L--------------MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST------ 442
MVS + +V L A E +I ++ST
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372
Query: 443 ---EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
EP + +L+ C N K G ++ +V+K N
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFN 409
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 304/541 (56%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y GK I AR LF+E+P R V + +I Y+ + ++ +M+ E++ P+
Sbjct: 49 LIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPN 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG-KMNEAMVAF 134
+ T + LKAC + L G + A++ G ++V ++++++Y C M++A + F
Sbjct: 109 AFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVF 168
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ K+ V W+++I G + +++M E ++ + ++AC +G
Sbjct: 169 RGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHT 228
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +H + ++ V S++DMY + A+ F M++ +++TW LI+G+
Sbjct: 229 FGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYE 288
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++ S L + M+S GF P+ + S + ACA + FL G+ IHG +RR D NL
Sbjct: 289 RSNPTES-LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLA 347
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L ++IDMYSKCG + + +F M RDL+SW ++ YG HG+GEEA+ LF +M+ +
Sbjct: 348 LSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSG 407
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD F ++LSA SH+GLV+EG +F LMV Y I P ++ Y C+VDLL RAG+VEEA
Sbjct: 408 IRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEA 467
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++++SM +P VW L C H ++G+ A ++L L P G + ++SN +A +
Sbjct: 468 YELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAAD 527
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW E A +RK M++ G KK G S VEV +++F++ D+ ++ E I VL+ L M
Sbjct: 528 GKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHM 587
Query: 554 R 554
+
Sbjct: 588 K 588
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 182/381 (47%), Gaps = 11/381 (2%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ ++++ Y G + EA F++M +D+V W+ MI G A + M E
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG-HLDLA 231
+D + + +++AC + +G VHG +I+ L+ + V +L+DMYA +D A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 232 SHVFKNMSRINIVTWGALISGFAQ--NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
VF+ + N V+W LI+G+ +G G + M ++ P S S+ A+ AC
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSI--AVRACT 222
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
IG G+ +H + F+ NL + S++DMY +C S A F +M RDLI+WN
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+IA Y + E+L +F M P+ TF S+++A + + G+ ++ +
Sbjct: 283 LIAGYE-RSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRR- 340
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ ++D+ ++ G + ++ ++ MS L W A++ G H ++
Sbjct: 341 GLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR-DLVSWTAMMIGYGTHGYGEEAVEL 399
Query: 469 AKKVLK--LNPDDLGIHALVS 487
K+++ + PD + A++S
Sbjct: 400 FDKMVRSGIRPDRVVFMAILS 420
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
VL T++I Y G+ AR LFD+M RD+++W V+IA Y + A +F +M+
Sbjct: 44 VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGR 398
+ P+ T +S+L A + GR
Sbjct: 104 ELDPNAFTISSVLKACKGMKCLSYGR 129
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 320/617 (51%), Gaps = 78/617 (12%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDT---YNSIIIAYSRKESPFEVLGLYNQMIKED 71
R++++Y G + A+++FE P+ +NSI+ A E L +Y +M K
Sbjct: 71 RVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLG 130
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V D TF + ++AC + K+ + VE+G+ ++ VG+ ++ +Y K G+M++A
Sbjct: 131 VSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDAR 190
Query: 132 VAFEKMQRKDLVCWSSMINGLVFN-----------------------------------G 156
FE+M + V W++M++G N G
Sbjct: 191 KVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 250
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
Q E ++ + RM+ GI A + ++ DL G +HGY ++ + V+
Sbjct: 251 QHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKN 310
Query: 217 SLVDMYAKTGHLDLASHVF-----KN---------------------------------- 237
SL+ +Y K G+++ A +F KN
Sbjct: 311 SLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYP 370
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M R N+V+W A+I GFA G LEL MQ + +SV++ S L CA++ L LG
Sbjct: 371 MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLG 430
Query: 298 KSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IHG+ VR D N+++G +I+MY+K G +F++++++DLISWN ++A YGIH
Sbjct: 431 REIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIH 490
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G GE A+ F QMI+ +PD TF ++LSA SH+GLV EGR FD M+ +++++P +H
Sbjct: 491 GLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEH 550
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YACMVDLL RAG ++EA K+V SM EP VW ALL+ C HK + E+ A ++ LN
Sbjct: 551 YACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLN 610
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ G + L+SN +A +WE+ A VR + + G+KK PG S ++V +++ F + H
Sbjct: 611 SEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQH 670
Query: 537 NQYEDIVYVLKKLYLEM 553
+ E++ +LK L L+M
Sbjct: 671 AELEEVYRILKDLGLQM 687
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 179/354 (50%), Gaps = 43/354 (12%)
Query: 94 MGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMIN 150
+ ++I + + G F+ + ++++Y G +++A FE + +L+ W+S++
Sbjct: 49 LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILR 108
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
V +G EA++ Y RM+K G+ AD +I+ACA +G + SVHG+ +
Sbjct: 109 ANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 168
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
++ V L+ MY K G +D A VF+ M+ + V+W ++SG+A N E+ M
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 228
Query: 271 SCGFEPDSV---SLVSALLACAQ-------IGFLKL------------------------ 296
S G EP+ V SL+S+ C Q G +++
Sbjct: 229 SAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFD 288
Query: 297 -GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
GK IHGY V+ F+ L + S+I +Y K G + AR LF ++++++++SWN +I+SY
Sbjct: 289 EGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYA 348
Query: 355 IHGHGEEALSLFLQMIET----MVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
G +EA ++FLQ+ +T MV+P+ ++++++ + G EE F M
Sbjct: 349 DLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 402
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 320/617 (51%), Gaps = 78/617 (12%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDT---YNSIIIAYSRKESPFEVLGLYNQMIKED 71
R++++Y G + A+++FE P+ +NSI+ A E L +Y +M K
Sbjct: 71 RVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLG 130
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V D TF + ++AC + K+ + VE+G+ ++ VG+ ++ +Y K G+M++A
Sbjct: 131 VSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDAR 190
Query: 132 VAFEKMQRKDLVCWSSMINGLVFN-----------------------------------G 156
FE+M + V W++M++G N G
Sbjct: 191 KVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 250
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
Q E ++ + RM+ GI A + ++ DL G +HGY ++ + V+
Sbjct: 251 QHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKN 310
Query: 217 SLVDMYAKTGHLDLASHVF-----KN---------------------------------- 237
SL+ +Y K G+++ A +F KN
Sbjct: 311 SLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYP 370
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M R N+V+W A+I GFA G LEL MQ + +SV++ S L CA++ L LG
Sbjct: 371 MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLG 430
Query: 298 KSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IHG+ VR D N+++G +I+MY+K G +F++++++DLISWN ++A YGIH
Sbjct: 431 REIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIH 490
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G GE A+ F QMI+ +PD TF ++LSA SH+GLV EGR FD M+ +++++P +H
Sbjct: 491 GLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEH 550
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YACMVDLL RAG ++EA K+V SM EP VW ALL+ C HK + E+ A ++ LN
Sbjct: 551 YACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLN 610
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ G + L+SN +A +WE+ A VR + + G+KK PG S ++V +++ F + H
Sbjct: 611 SEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQH 670
Query: 537 NQYEDIVYVLKKLYLEM 553
+ E++ +LK L L+M
Sbjct: 671 AELEEVYRILKDLGLQM 687
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 179/354 (50%), Gaps = 43/354 (12%)
Query: 94 MGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMIN 150
+ ++I + + G F+ + ++++Y G +++A FE + +L+ W+S++
Sbjct: 49 LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILR 108
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
V +G EA++ Y RM+K G+ AD +I+ACA +G + SVHG+ +
Sbjct: 109 ANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 168
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
++ V L+ MY K G +D A VF+ M+ + V+W ++SG+A N E+ M
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 228
Query: 271 SCGFEPDSV---SLVSALLACAQ-------IGFLKL------------------------ 296
S G EP+ V SL+S+ C Q G +++
Sbjct: 229 SAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFD 288
Query: 297 -GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
GK IHGY V+ F+ L + S+I +Y K G + AR LF ++++++++SWN +I+SY
Sbjct: 289 EGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYA 348
Query: 355 IHGHGEEALSLFLQMIET----MVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
G +EA ++FLQ+ +T MV+P+ ++++++ + G EE F M
Sbjct: 349 DLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 402
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 328/634 (51%), Gaps = 83/634 (13%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDT---YNSIIIAYSRKESPFEVLGLYNQMIKED 71
R++++Y G + A+++FE P+ +NSI+ A E L +Y +M K
Sbjct: 909 RVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLG 968
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V D TF + ++AC + K+ + VE+G+ ++ VG+ ++ +Y K G+M++A
Sbjct: 969 VSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDAR 1028
Query: 132 VAFEKMQRKDLVCWSSMINGLVFN-----------------------------------G 156
FE+M + V W++M++G N G
Sbjct: 1029 KVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 1088
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
Q E ++ + RM+ GI A + ++ DL G +HGY ++ + V+
Sbjct: 1089 QHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKN 1148
Query: 217 SLVDMYAKTGHLDLASHVF-----KN---------------------------------- 237
SL+ +Y K G+++ A +F KN
Sbjct: 1149 SLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYP 1208
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M R N+V+W A+I GFA G LEL MQ + +SV++ S L CA++ L LG
Sbjct: 1209 MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLG 1268
Query: 298 KSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IHG+ VR D N+++G +I+MY+K G +F++++++DLISWN ++A YGIH
Sbjct: 1269 REIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIH 1328
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G GE A+ F QMI+ +PD TF ++LSA SH+GLV EGR FD M+ +++++P +H
Sbjct: 1329 GLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEH 1388
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YACMVDLL RAG ++EA K+V SM EP VW ALL+ C HK + E+ A ++ LN
Sbjct: 1389 YACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLN 1448
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ G + L+SN +A +WE+ A VR + + G+KK PG S ++V +++ F + H
Sbjct: 1449 SEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQH 1508
Query: 537 NQYEDIVYVLKKLYLEMRAISSWLQGHMEEHEEH 570
+ E++ +LK L L+M ++G++ + +E
Sbjct: 1509 AELEEVYRILKDLGLQME-----VEGYIPDIDEE 1537
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 179/354 (50%), Gaps = 43/354 (12%)
Query: 94 MGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMIN 150
+ ++I + + G F+ + ++++Y G +++A FE + +L+ W+S++
Sbjct: 887 LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILR 946
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
V +G EA++ Y RM+K G+ AD +I+ACA +G + SVHG+ +
Sbjct: 947 ANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 1006
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
++ V L+ MY K G +D A VF+ M+ + V+W ++SG+A N E+ M
Sbjct: 1007 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 1066
Query: 271 SCGFEPDSV---SLVSALLACAQ-------IGFLKL------------------------ 296
S G EP+ V SL+S+ C Q G +++
Sbjct: 1067 SAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFD 1126
Query: 297 -GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
GK IHGY V+ F+ L + S+I +Y K G + AR LF ++++++++SWN +I+SY
Sbjct: 1127 EGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYA 1186
Query: 355 IHGHGEEALSLFLQMIET----MVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
G +EA ++FLQ+ +T MV+P+ ++++++ + G EE F M
Sbjct: 1187 DLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 1240
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 314/540 (58%), Gaps = 2/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA ++F E+ + ++NS++ Y + E + ++M++ +PD
Sbjct: 306 LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD 365
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A L L G+E+ A++ +D VG++++++Y+KC + + F+
Sbjct: 366 HACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFD 425
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ KD + W+++I + + EA++ ++ +KEGI D +++ +++AC+ L
Sbjct: 426 RMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILL 485
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H Y+IR L LD+ V+ ++D+Y + G + + +F+ + + +IVTW ++I+ +A
Sbjct: 486 AKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYAN 544
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+GL L L EMQS +PDSV+LVS L A + L GK +HG+ +RR F +
Sbjct: 545 SGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI 604
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S++DMYS CG S A +F+ ++ +D++ W +I + G+HGHG++A+ LF +M++T V
Sbjct: 605 VSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGV 664
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SHS LV EG+ + D+M+S Y+++P ++HYAC+VDLL R+G+ EEA
Sbjct: 665 TPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAY 724
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM +P VW +LL C HK + A ++L+L PD+ G + LVSN FA
Sbjct: 725 EFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMG 784
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW VR + + G++K P S +E+ +H F D SH E I L ++ +R
Sbjct: 785 KWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLR 844
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 227/456 (49%), Gaps = 31/456 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM---IKED 71
+++ +YG + AR LF+ + R V ++N++I AY S E LG+Y M
Sbjct: 100 KLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASG 159
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V PD T LKA D + G E+ AV+ G FV ++++ +Y KCG ++ AM
Sbjct: 160 VAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAM 219
Query: 132 VAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
FE M +D+ W+SMI+G + NG +A+D ++ M++ + + +G++Q C +L
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTEL 279
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G +H ++ ++++ LV MY K G +D A VF+ + + ++W +++
Sbjct: 280 AQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSML 338
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
S + QNGL +E + EM GF+PD +VS A +G+L GK +H Y ++ R D
Sbjct: 339 SCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLD 398
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ +G +++DMY KC + +FD+M+ +D ISW II Y EAL +F +
Sbjct: 399 SDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREA 458
Query: 370 IETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+ +K D S+L A S H + G DL+V
Sbjct: 459 QKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNG--LLDLVVKNR---------- 506
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++D+ GEV +LK+ +++ + + W ++++
Sbjct: 507 -IIDIYGECGEVYHSLKMFETVE-QKDIVTWTSMIN 540
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 250/477 (52%), Gaps = 12/477 (2%)
Query: 16 IIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+IA+Y + SA ++FE + R V ++NS+I + + L L+ M + +
Sbjct: 205 LIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSM 264
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG-SSMLNLYVKCGKMNEAMVA 133
+S T L+ C L L +G E+ A L G++V + +++L +Y KCG+++ A+
Sbjct: 265 NSYTTVGVLQVCTELAQLNLGREL--HAALLKSGSEVNIQCNALLVMYTKCGRVDSALRV 322
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F ++ KD + W+SM++ V NG EA++ M + G D ++ L A LG
Sbjct: 323 FREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWL 382
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH Y+I++ L+ D +V +L+DMY K +++ ++HVF M + ++W +I+ +
Sbjct: 383 LNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCY 442
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQ+ LE+ E Q G + D + + S L AC+ + + L K +H Y +R +LV
Sbjct: 443 AQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLV 502
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +ID+Y +CG + +F+ ++ +D+++W +I Y G EAL LF +M T
Sbjct: 503 VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTD 562
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+PD S+L A+ + +G+ ++ + E + +VD+ + G + A
Sbjct: 563 VQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRR-NFHMEEAIVSSLVDMYSGCGSLSGA 621
Query: 434 LKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALV 486
LK+ +++ + + +W A++ +G H H K +I + K++L+ + PD + AL+
Sbjct: 622 LKVFNAVKCKD-MVLWTAMINATGMHGHGKQAI--DLFKRMLQTGVTPDHVSFLALL 675
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 199/398 (50%), Gaps = 14/398 (3%)
Query: 95 GEEIWRKAVELGY--GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
G ++ AV G G+D F+ + +L +Y KCG++ +A + F+ M + + W+++I
Sbjct: 77 GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAY 136
Query: 153 VFNGQPREAVDAYKRMK---KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
+ +G EA+ Y+ M+ G+ D + +++A GD R G VHG +++ L+
Sbjct: 137 LSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLD 196
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGFAQNGLAGSTLELLME 268
V +L+ MYAK G LD A VF+ M ++ +W ++ISG QNG+ L+L
Sbjct: 197 RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRG 256
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVP 328
MQ +S + V L C ++ L LG+ +H ++ + +++ MY+KCG
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRV 316
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A +F ++ +D ISWN +++ Y +G EA+ +M+ +PDH+ SL SA+
Sbjct: 317 DSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAV 376
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
H G + G+ + K ++ + ++D+ + +E + + D M + ++
Sbjct: 377 GHLGWLLNGKEVHAYAI-KQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHIS- 434
Query: 449 WVALLSGCHNH-----KKFSIGEKVAKKVLKLNPDDLG 481
W +++ C+ + I + K+ +K++P +G
Sbjct: 435 WTTIIT-CYAQSSRHIEALEIFREAQKEGIKVDPMMIG 471
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
RII +YG ++ + K+FE + + + T+ S+I Y+ E L L+ +M DV+P
Sbjct: 506 RIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQP 565
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS L A L L G+E+ + + + + SS++++Y CG ++ A+ F
Sbjct: 566 DSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVF 625
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
++ KD+V W++MIN +G ++A+D +KRM + G+ D V + L+ AC+
Sbjct: 626 NAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACS 679
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 266 LMEMQSCGFEPDS------VSLVSALLACAQIGFLKLGKSIHGYTVRRFDF---NLVLGT 316
L+ Q+ G P + LV+A A AQ G +H + V + L T
Sbjct: 46 LLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQ------GVQVHAHAVATGSLEGDDGFLAT 99
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM---IETM 373
++ MY KCG + AR LFD M SR + SWN +I +Y G EAL ++ M +
Sbjct: 100 KLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASG 159
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAGEVE 431
V PD T AS+L A SG+ +GR ++ + K+ + + ++ + A+ G ++
Sbjct: 160 VAPDGCTLASVLKA---SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILD 216
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
A+++ + M +A W +++SGC + F
Sbjct: 217 SAMRVFELMHDGRDVASWNSMISGCLQNGMF 247
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 312/555 (56%), Gaps = 3/555 (0%)
Query: 2 IKTNLSAYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+KTN Y N VG + +Y + +V ARK+F P ++N++I+ Y+R++ E
Sbjct: 298 LKTNF-GYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEA 356
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ + K + D + + AL AC ++ G ++ AV+ G ++ V +++L++
Sbjct: 357 LEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDM 416
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + EA + F+ M+ KD V W+++I N E + + M + ++ D+
Sbjct: 417 YAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTF 476
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++ACA +G+ VHG I+ + LD V ++++DMY K G L A + + +
Sbjct: 477 GSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE 536
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
V+W ++ISGF+ + L M G PD+ + + L CA + ++LGK I
Sbjct: 537 RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQI 596
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG ++ + ++ + ++++DMYSKCG +R +F++ RD ++W+ +I +Y HG G
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
E+A+ LF +M VKP+H+ F S+L A +H G V++G ++F M S Y + P +HY+C
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL R+G+V EAL++++SM E +W LL C + EK A +L+L+P D
Sbjct: 717 MVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQD 776
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN +A+ W EVA +R M+ +KK PG S ++V E+HAF++ DK+H +
Sbjct: 777 SSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRS 836
Query: 540 EDIVYVLKKLYLEMR 554
E+I L EM+
Sbjct: 837 EEIYQQTHLLVDEMK 851
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 241/449 (53%), Gaps = 15/449 (3%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y G ++ A+ LF+ +P R V ++NS++ Y + + + ++ +M +++ D +TF
Sbjct: 114 YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATF 173
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
V LKAC + D +G ++ A+++G+ +DV G++++++Y C K++ A F +M
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPE 233
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++ VCWS++I G V N + E + YK M EG+ + ++CA L G +
Sbjct: 234 RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQL 293
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H Y+++ + D V T+ +DMYAK + A VF + ALI G+A+
Sbjct: 294 HAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQV 353
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVR-RFDFNLVLGTS 317
LE+ +Q + D +SL AL AC+ I G+L+ G +HG V+ DFN+ + +
Sbjct: 354 LEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE-GIQLHGLAVKCGLDFNICVANT 412
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMY+KCG A +FD M+ +D +SWN IIA++ + H EE L+LF+ M+ + ++PD
Sbjct: 413 ILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPD 472
Query: 378 HSTFASLLSALS-----HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
TF S++ A + + G+ GR M + + + ++D+ + G + E
Sbjct: 473 DYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG------SAIIDMYCKCGMLVE 526
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
A KI + + ++ W +++SG + K+
Sbjct: 527 AEKIHERLEERTTVS-WNSIISGFSSEKQ 554
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 233/456 (51%), Gaps = 6/456 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +F E+P R ++++I Y R + E L LY M+ E +
Sbjct: 211 LVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVS 270
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF A ++C L ++G ++ A++ +G D VG++ L++Y KC +M +A F
Sbjct: 271 QATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFN 330
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++I G Q EA++ ++ ++K +D DE+ + G + AC+ +
Sbjct: 331 TFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE 390
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +HG +++ L+ ++ V +++DMYAK G L A +F +M + V+W A+I+ Q
Sbjct: 391 GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQ 450
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N TL L + M EPD + S + ACA L G +HG ++ + +
Sbjct: 451 NEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFV 510
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+++IDMY KCG+ A + ++++ R +SWN II+ + GE ALS F +M++ V
Sbjct: 511 GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGV 570
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD+ T+A++L ++ VE G+ + K ++ + +VD+ ++ G ++++
Sbjct: 571 IPDNFTYATVLDICANLATVELGKQ-IHGQILKLQLHSDVYIASTIVDMYSKCGNMQDS- 628
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+I+ + + W A++ H +GE K
Sbjct: 629 RIMFEKAPKRDYVTWSAMICAYAYH---GLGEDAIK 661
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 202/443 (45%), Gaps = 36/443 (8%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF+ + C +L + G++ + G+ VFV + +L Y KC +N A F+KM
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 138 QRKDLVCWSSMING-----------LVFNGQP--------------------REAVDAYK 166
++D++ W++MI G +F+ P R++++ +
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+M+ I D +++AC + D GL VH +I+ + DV T+LVDMY+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
LD A ++F M N V W A+I+G+ +N L+L M G + SA
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 287 ACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+CA + +LG +H Y ++ F ++ ++GT+ +DMY+KC AR +F+ + S
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQS 339
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
N +I Y EAL +F + ++ + D + + L+A S EG L V
Sbjct: 340 HNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAV 399
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG--CHNHKKFS 463
K + ++D+ A+ G + EA I D M + ++ W A+++ + H + +
Sbjct: 400 -KCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS-WNAIIAAHEQNEHVEET 457
Query: 464 IGEKVAKKVLKLNPDDLGIHALV 486
+ V+ + PDD ++V
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVV 480
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 298/514 (57%), Gaps = 1/514 (0%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A G + ++ +Y D+ ARK+FE +P R V ++ S+I + + L L+N+M
Sbjct: 198 ADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKM 257
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+++V P T + AC +L L G + ++ G ++ F+ +++L++YVKCG++
Sbjct: 258 RQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGEL 317
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+ A F+++ DLV W++MI G NG P +A+ + + I + V ++ A
Sbjct: 318 DHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSAS 377
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A L D G S+HG +++ L V +LVDMYAK + A +F +S ++V W
Sbjct: 378 AQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWN 437
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
++ISG+A+N + L L +M G PD++S+V+AL A +G L +GKSIHGY V+
Sbjct: 438 SMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKH 497
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F N+ + T+++++Y+KCG AR +FD+M R+ ++W +I YG+ G ++ LF
Sbjct: 498 AFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLF 557
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M++ V P+ F S+LS SHSG+V G+ +FD M + I P+ KHYACMVD+LAR
Sbjct: 558 GEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLAR 617
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG +E+AL+ +D+M + +VW A L GC H + E+ K+++ L+P+ ++ L+
Sbjct: 618 AGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLI 677
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
SN + W++ +R+ M++ G+ K+PG S V
Sbjct: 678 SNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 236/454 (51%), Gaps = 25/454 (5%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++ Y D+ SAR +F+ P +Y +++ + E + + L++ M + P
Sbjct: 102 KLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCP 161
Query: 75 ---DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D ++ALKAC+ + G + A+++G G D FV +S++++Y K + A
Sbjct: 162 EAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECAR 220
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE++ +++V W+SMI+G V NG + + + +M+++ + E + +I AC+ L
Sbjct: 221 KVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALF 280
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HG I++ L + + +L+DMY K G LD A VF +S I++V W +I
Sbjct: 281 GLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIV 340
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFD 309
G+ QNG L L ++ + P+SV+ + L A AQ+ L LGKSIHG V+ +
Sbjct: 341 GYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVE 400
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+N V+G +++DMY+KC S A +F ++ ++D+++WN +I+ Y + G++AL LF QM
Sbjct: 401 YN-VVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQM 459
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--------ACMV 421
PD + + LSA G DL++ K KH ++
Sbjct: 460 SLQGSSPDAISVVNALSASVCLG---------DLLIGKSIHGYAVKHAFVSNIYVDTALL 510
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+L + G++ A ++ D M+ + W A++ G
Sbjct: 511 NLYNKCGDLLSARRVFDEMNDRNSV-TWCAMIGG 543
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 300/542 (55%), Gaps = 2/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + A ++F + R V ++ ++I +++ E +N+MI+ + P+
Sbjct: 347 LLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPN 406
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC LK G +I + ++ GY D V +++L++Y KCG + +A FE
Sbjct: 407 RVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFE 466
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++++V W++MI V + + AV ++ + KEGI D ++ C
Sbjct: 467 RISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALEL 526
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G V IR D+ ++ +LV M+ G L A ++F +M ++V+W +I+GF Q
Sbjct: 527 GKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQ 586
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G + MQ G +PD ++ L ACA L G+ +H T D ++V+
Sbjct: 587 HGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVV 646
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
GT +I MY+KCG A +F + +++ SW +I Y HG G+EAL LF QM + V
Sbjct: 647 GTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGV 706
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF LSA +H+GL++EG + F+ M + I+P +HY CMVDL RAG + EA+
Sbjct: 707 KPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAV 765
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++ M +P +W ALL C H + EKVA+K L+L+P+D G++ ++SN +A
Sbjct: 766 EFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAG 825
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W+EV +RK M G+ K PG S +EV+G +H F +DK+H Q E+I L +L++EM+
Sbjct: 826 MWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMK 885
Query: 555 AI 556
+
Sbjct: 886 KL 887
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 259/475 (54%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++Y + SA+++F+E+P + V ++N ++ Y + E L+ QM+++ V+PD
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L AC ++ G E++ + G+ D+FVG++++N+++KCG +++A+ F
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFN 264
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ R+DL+ W+SMI GL + Q ++A + ++ M++EG+ D+V + L++AC
Sbjct: 265 NLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH L+ ++ V T+L+ MY K G ++ A VF + N+V+W A+I+GFAQ
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G +M G EP+ V+ +S L AC++ LK G+ IH ++ + + +
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRV 444
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++ MY+KCG AR +F+++ +++++WN +I +Y H + A++ F +++ +
Sbjct: 445 RTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI 504
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD STF S+L+ +E G+ W ++ + + +V + G++ A+
Sbjct: 505 KPDSSTFTSILNVCKSPDALELGK-WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAM 563
Query: 435 KIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
+ + M E L W +++G H +F+ + + PD + L++
Sbjct: 564 NLFNDMP-ERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLN 617
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 212/404 (52%), Gaps = 5/404 (1%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
T++ L+ C+ +L GE I D+F+ + ++++Y KCG N A F++M
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
KD+ W+ ++ G V + + EA +++M ++G+ D+ + ++ ACAD + G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+ + + D+ V T+L++M+ K G +D A VF N+ R +++TW ++I+G A++
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGT 316
L M+ G +PD V+ VS L AC L+ GK +H D + +GT
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++ MY+KCG A +F+ ++ R+++SW +IA + HG EEA F +MIE+ ++P
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ TF S+L A S +++GR D ++ I A ++ + A+ G + +A +
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTA-LLSMYAKCGSLMDARNV 464
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
+ +S + + W A+++ H+K+ + +LK + PD
Sbjct: 465 FERISKQ-NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPD 507
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 194/467 (41%), Gaps = 61/467 (13%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G+ NE V + QR + + +N L GQ EA+ + I L+
Sbjct: 58 GQGNE-FVDIKNTQRAN-----AFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLL 111
Query: 185 QAC---ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
Q C +LGD G +H + + D+ + L+ MYAK G+ + A +F M
Sbjct: 112 QLCIKHKNLGD---GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDK 168
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++ +W L+ G+ Q+ L +M G +PD + V L ACA + G +
Sbjct: 169 DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF 228
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
+ +D +L +GT++I+M+ KCG A +F+ + RDLI+W +I H +
Sbjct: 229 SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFK 288
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR---------------YWFDLMV 405
+A +LF M E V+PD F SLL A +H +E+G+ Y ++
Sbjct: 289 QACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALL 348
Query: 406 SKY-KIQPTEK--------------HYACMVDLLARAGEVEEALKIVDSM---STEPGLA 447
S Y K E + M+ A+ G +EEA + M EP
Sbjct: 349 SMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRV 408
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
++++L C G ++ +++K DD AL+S M K + R
Sbjct: 409 TFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLS----MYAKCGSLMDARNV 464
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+++ +VV N + A++ H +Y++ V + L E
Sbjct: 465 -----FERISKQNVVAWNAMITAYV----QHEKYDNAVATFQALLKE 502
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 223/693 (32%), Positives = 341/693 (49%), Gaps = 115/693 (16%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEEL------------------------ 36
MI + G + R+I +Y +D+VSA LF+E+
Sbjct: 41 MIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLA 100
Query: 37 -------PLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
PL DT YN++I YS F + L+ +++ RPD+ TFT L A
Sbjct: 101 REIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALA 160
Query: 88 SLM-DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC---------------------- 124
++ D K ++I V+ G G V +++L+++VKC
Sbjct: 161 LIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEM 220
Query: 125 ------------------GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
G+++ A + M K +V W++MI+G V +G EA++ ++
Sbjct: 221 TERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFR 280
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH----LNLDVKVQTSLVDMY 222
+M GI DE ++ ACA+ G G VH Y +R L+ + V +L +Y
Sbjct: 281 KMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLY 340
Query: 223 AKTGHLDLASHVFKNMS------------------RI-------------NIVTWGALIS 251
K G +D A VF M RI N++TW +IS
Sbjct: 341 WKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMIS 400
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G AQNG +L+L M+S GFEP + A++ACA + L G+ +H VR FD
Sbjct: 401 GLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDS 460
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L G ++I MY+KCGV A LF M D +SWN +IA+ G HGHG +AL LF M+
Sbjct: 461 SLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELML 520
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + PD TF ++LS SH+GLVEEG +F M Y I P E HYA M+DLL RAG+
Sbjct: 521 KEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKF 580
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA ++++M EPG +W ALL+GC H +G + A+++ +L P G + L+SN +
Sbjct: 581 SEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMY 640
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A +W++VA VRK MR G+KK PG S +EV ++H F+++D H + + + L++L
Sbjct: 641 ATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELG 700
Query: 551 LEMRAI-----SSWLQGHMEEHEEHDPLSTAAQ 578
L+MR + + ++ ME ++ LST ++
Sbjct: 701 LKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSE 733
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 322/592 (54%), Gaps = 49/592 (8%)
Query: 11 NSVGRIIALYGG--KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
NSV + AL ++ +K+ + + V ++ +++ Y++ ++ +G++ M+
Sbjct: 271 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNML 330
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
+ ++PD+ L A L + + V G+ ++VFVG+S++ LY KCG +
Sbjct: 331 SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLG 390
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK--EGIDADEVVMMGLIQA 186
+A+ F+ M +D+V WSSMI +G+ EA++ + +M + +GI + + M Q
Sbjct: 391 DAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQ-PQV 449
Query: 187 CADLGDSRFGLSVH------GYSIRRH------------------------------LNL 210
L + L+ H + +R H L
Sbjct: 450 QPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQY 509
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D ++ T MY +D AS VF+++ W +I GFA +G S+LEL +M
Sbjct: 510 DSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM 569
Query: 271 SCGFEPDS-------VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
G +PD+ VS++S LLAC +G L+ G+ H Y ++ F+F++++ T+++DMY
Sbjct: 570 EKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMY 629
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SKCG AR LFD+ +DL+ W+ +IASYGIHGHG +A+ LF QM++ V+P H TF
Sbjct: 630 SKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFT 689
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
+LSA SHSGL+EEG+ +F LM ++ I +YACMVDLL RAG++ EA+ ++++M
Sbjct: 690 CVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 749
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
EP ++W +LL C H + EK+A + L+P G H L+SN +A + +W EV V
Sbjct: 750 EPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKV 809
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
RK M + G K+ G+S+VE + ++H F + D+SH Q+E + L++L M+
Sbjct: 810 RKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMK 861
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 214/400 (53%), Gaps = 47/400 (11%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
++ +LY + +ARK+F+E P V +NS + +Y R++ E L L++ MI
Sbjct: 41 KLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEA 100
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD+ T +ALKAC L L++G+ I +K E+G +D+FVGS+++ LY KCG+M EA
Sbjct: 101 PDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG--SDMFVGSALVELYSKCGQMGEA 158
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACAD 189
+ FE+ QR D V W+SM+ G N P EA+ + +M + D D ++ L+ A
Sbjct: 159 LKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAK 218
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM----------- 238
G + ++ + DV ++++ YA + A ++F M
Sbjct: 219 TGCEKIAANLFSKMPEK----DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVT 274
Query: 239 ----------SR--------------INIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
SR ++V+W AL+SG+AQNG+A ++ + M S G
Sbjct: 275 VVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI 334
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
+PD+V++V L A +++G + +HGY VR F+ N+ +G S+I++YSKCG A
Sbjct: 335 QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK 394
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
LF M RD++ W+ +IA+YGIHG G EAL +F QMI+ M
Sbjct: 395 LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVM 434
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 218/499 (43%), Gaps = 84/499 (16%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ LY A LF ++P + V +++++I Y+ E+ E L L+++MI++
Sbjct: 209 VNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRF 268
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+S T AL+AC +L+ G++I + AV
Sbjct: 269 EPNSVTVVSALQACAVSRNLEEGKKIHKIAV----------------------------- 299
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
KD+V W ++++G NG +++ ++ M +GI D V ++ ++ A ++LG
Sbjct: 300 ------WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 353
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ L +HGY +R N +V V SL+++Y+K G L A +FK M ++V W ++I+
Sbjct: 354 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 413
Query: 253 FAQNGLAGSTLELLMEM-------QSC---GFEPD---SVSLVSALLAC----------A 289
+ +G G LE+ +M SC +P +++ S LA
Sbjct: 414 YGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYM 473
Query: 290 QIGFLKLGKSIHGYTVRRF---------------DFNLVLGTSVIDMYSKCGVPSCARAL 334
+ F LG + F ++ + T MY A +
Sbjct: 474 RAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIV 533
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS-------TFASLLSA 387
F+ + + WNV+I + G +L L+ +M+E +KPD+S + S+L A
Sbjct: 534 FEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLA 593
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ G + +G WF V + + ++D+ ++ G ++ A + D + + L
Sbjct: 594 CGNLGALRKGE-WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLV 651
Query: 448 VWVALLS--GCHNHKKFSI 464
W A+++ G H H + +I
Sbjct: 652 CWSAMIASYGIHGHGRKAI 670
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 35/300 (11%)
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+ + G +D F + + +LY KC + A F++ ++ W+S + Q E
Sbjct: 26 QVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEE 85
Query: 161 AVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNLDVKVQTSL 218
+ + M G D + ++ACA L G +HG++ + + D+ V ++L
Sbjct: 86 TLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSAL 145
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
V++Y+K G + A VF+ R + V W ++++G+ QN L L +M
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM--------- 196
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
++ C FD +L L S++++Y+K G A LF +M
Sbjct: 197 -----VMMDC-------------------FDGDLPLVNSLLNLYAKTGCEKIAANLFSKM 232
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+D+ISW+ +IA Y + EAL+LF +MIE +P+ T S L A + S +EEG+
Sbjct: 233 PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 292
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 132/268 (49%), Gaps = 22/268 (8%)
Query: 1 MIKTNLSAYG-----NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKE 55
M K+N+ AYG + + +Y N I +A +FE++P +N +I ++
Sbjct: 497 MSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 556
Query: 56 SPFEVLGLYNQMIKEDVRPDSS-------TFTVALKACVSLMDLKMGEEIWRKAVELGYG 108
L LY++M+++ ++PD+S + L AC +L L+ GE ++ G+
Sbjct: 557 RFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFE 616
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
D+ V ++++++Y KCG ++ A F++ KDLVCWS+MI +G R+A+D + +M
Sbjct: 617 FDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQM 676
Query: 169 KKEGIDADEVVMMGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
K G+ V ++ AC+ + G F L + I R L+ +VD+
Sbjct: 677 VKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLS----NYACMVDLLG 732
Query: 224 KTGHLDLASHVFKNMS-RINIVTWGALI 250
+ G L A + +NM + WG+L+
Sbjct: 733 RAGQLSEAVDLIENMPVEPDASIWGSLL 760
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
T + +Y+KC AR +FD+ ++ WN + SY EE L LF MI T
Sbjct: 38 FATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTA 97
Query: 374 VK-PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ PD+ T L A + ++E G+ +I + +V+L ++ G++ E
Sbjct: 98 GEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGE 157
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
ALK+ + P +W ++++G
Sbjct: 158 ALKVFEEFQ-RPDTVLWTSMVTG 179
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 306/551 (55%), Gaps = 36/551 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
YN +I + R P L Y QM + V PD+ T+ L+AC DL +G + +
Sbjct: 130 YNILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLHGL 189
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G G +F ++++++Y K G + A FE M +KD+V W+SMI+ V GQ +AV+
Sbjct: 190 ATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQAVE 249
Query: 164 AYKRMKKEGIDADEVV----------------MMGLIQ-------------------ACA 188
++RM+ E + + V +GLI+ AC+
Sbjct: 250 LFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACS 309
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
+G R G +HG ++R + + V +L+ MYA+ H+D A +FK ++ +VTW
Sbjct: 310 RVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNT 369
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+I+ FA + A L+ EM G +P+ V++V+ L CA++ L+ G+ +H + V+
Sbjct: 370 MIASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNG 429
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F +L S+IDMYSK G S A+ +FD M RD+IS+ +IA YG+ G G AL LF
Sbjct: 430 FKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFD 489
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QMI++ +KPDH + ++LSA SHSGLV EG FD M S Y I+P +HY+CMVDL AR+
Sbjct: 490 QMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARS 549
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G +E+A +++ S+ P +W AL+ CH+ IGE+ A+++L++ ++ G + L++
Sbjct: 550 GLLEKAEGMLNESSSPPTSMMWAALVGACHDRGNIIIGERAARRLLEMKTENAGHYVLIA 609
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N +A W+E+A VRK MR G+ K PG + V++ F++ D+S+ +I VL
Sbjct: 610 NMYAAAGCWDELATVRKLMRDLGVTKAPGLAWVDLRNGFAPFLVGDRSNPLAPEIYEVLD 669
Query: 548 KLYLEMRAISS 558
+L +MR I +
Sbjct: 670 ELSEQMRNIGN 680
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 180/395 (45%), Gaps = 41/395 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAY--------------SRKESPFEV- 60
++++Y D+V+ARK+FE + + V ++NS+I AY + EV
Sbjct: 203 LVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQAVELFERMRAEEAEVN 262
Query: 61 --------------------LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+GL +M+ + D T + AC + L++G+EI
Sbjct: 263 SVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACSRVGWLRLGKEIHG 322
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
AV + V ++++ +Y +C M+ A + F+ + +V W++MI + + E
Sbjct: 323 LAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTMIASFALSDEAEE 382
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A M G+ + V ++ L+ CA + + + G +H + ++ + SL+D
Sbjct: 383 ASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLID 442
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY+K+G L +A +VF M +++++ +I+G+ G L L +M G +PD +S
Sbjct: 443 MYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHIS 502
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQM 338
+V+ L AC+ G + G+ + + + + ++D+Y++ G+ A + ++
Sbjct: 503 MVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNES 562
Query: 339 QSRDL-ISWNVIIASYGIHGH---GEEALSLFLQM 369
S + W ++ + G+ GE A L+M
Sbjct: 563 SSPPTSMMWAALVGACHDRGNIIIGERAARRLLEM 597
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 10/262 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
++ N + +I +Y + SA LF+ L GV T+N++I +++ + E
Sbjct: 325 VRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTMIASFALSDEAEEAS 384
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L ++M+ V+P+ T L C + +L+ G+E+ V+ G+ + +S++++Y
Sbjct: 385 RLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMY 444
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G ++ A F+ M +D++ ++ MI G G+ A+ + +M GI D + M+
Sbjct: 445 SKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMV 504
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF- 235
++ AC+ G+ F Y I+ + + + +VD+YA++G L+ A +
Sbjct: 505 TVLSACSHSGLVTEGEKLFDKMTSSYGIKPQM----EHYSCMVDLYARSGLLEKAEGMLN 560
Query: 236 KNMSRINIVTWGALISGFAQNG 257
++ S + W AL+ G
Sbjct: 561 ESSSPPTSMMWAALVGACHDRG 582
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 192 DSRFGLSV----HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
D R G+ + + RH + + L ++ L AS + + + + +
Sbjct: 77 DLRLGVQLHGLSLSLGLSRHP---LLLPRLLSLYSSQPYLLPFASSLAADAT--CPLPYN 131
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
LIS ++G L +M PD+ + S L ACA+ G L LG+++H + +
Sbjct: 132 ILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLHGLAT 191
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+L +++ MY+K G AR +F+ M +D++SWN +I++Y G +A+ LF
Sbjct: 192 GVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQAVELF 251
Query: 367 LQM 369
+M
Sbjct: 252 ERM 254
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K Y +I +Y + A+ +F+ + R + +Y +I Y +
Sbjct: 425 IVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIA 484
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLN 119
L L++QMI ++PD + L AC + GE+++ K G + S M++
Sbjct: 485 LRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVD 544
Query: 120 LYVKCGKMNEA 130
LY + G + +A
Sbjct: 545 LYARSGLLEKA 555
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 304/540 (56%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y ++V AR+ F LP V+T N++++ R E + L+ M + V D
Sbjct: 293 IVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFD 352
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + AC + G ++ AV+ G+ DV V +++L+LY KC + EA + F+
Sbjct: 353 VISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQ 412
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+++D V W+++I L N + + M + G++ D+ +++ACA L +
Sbjct: 413 EMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEY 472
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VHG +I+ L LD V +++VDMY K G + A + + +V+W ++ISGF+
Sbjct: 473 GLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSL 532
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVL 314
+ EM G +PD + + L CA + ++LGK IHG +++ + +
Sbjct: 533 TKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYI 592
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY+KCG + +F++ + D +SWN +I Y +HG G EAL +F +M V
Sbjct: 593 SSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANV 652
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+H+TF ++L A SH GL+++G +F LM S+YK+ P +H+ACMVD+L R+ +EAL
Sbjct: 653 VPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEAL 712
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM E VW LLS C + + E A VL+L+PDD ++ L+SN +A
Sbjct: 713 EFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSG 772
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +V+ R+ MR+ ++K PG S +EV E+H F++ DK H + +++ +L L EM+
Sbjct: 773 KWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMK 832
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 235/455 (51%), Gaps = 3/455 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + ++ +YG + A + F + R ++ + I + E +
Sbjct: 178 VKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGM 237
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ QM + + + A ++C ++ L ++ A++ + +D VG++++++Y
Sbjct: 238 ELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVY 297
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G + +A AF + ++ ++M+ GLV G EA+ ++ M + G+ D + +
Sbjct: 298 AKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLS 357
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G+ ACA++ GL VH +++ ++DV V+ +++D+Y K L A VF+ M +
Sbjct: 358 GVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 417
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V+W A+I+ QN T+ L EM G EPD + S L ACA + L+ G +H
Sbjct: 418 DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G ++ + + ++V+DMY KCG + A+ L D++ ++L+SWN II+ + + E
Sbjct: 478 GKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSE 537
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EA F +M++ VKPDH T+A++L ++ +E G+ ++ K ++ E + +
Sbjct: 538 EAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQII-KQEMLGDEYISSTL 596
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
VD+ A+ G + ++L + + + + W A++ G
Sbjct: 597 VDMYAKCGNMPDSLLMFEK-ARKLDFVSWNAMICG 630
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 231/476 (48%), Gaps = 25/476 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y D +A LF +P V ++N++I Y + +GL +M + V D
Sbjct: 91 MLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALD 150
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T V LK+C L DL +G +I AV+ G DV GS+++++Y KC +++A+ F
Sbjct: 151 RTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFH 210
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V W + I G V N Q ++ + +M++ G+ + ++CA +
Sbjct: 211 GMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLST 270
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H ++I+ + D V T++VD+YAK G+L A F + N+ T A++ G +
Sbjct: 271 ARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR 330
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
GL ++L M G D +SL ACA++ G +H V+ FD ++ +
Sbjct: 331 TGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCV 390
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++D+Y KC A +F +M+ RD +SWN IIA+ + E+ ++ +M+ + +
Sbjct: 391 RNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGM 450
Query: 375 KPDHSTFASLLSALS-----HSGLVEEGR-----YWFDLMVSKYKIQPTEKHYACMVDLL 424
+PD T+ S+L A + GLV G+ D VS + +VD+
Sbjct: 451 EPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS-----------STVVDMY 499
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PD 478
+ G + EA K+ D + + L W +++SG K+ ++ ++L + PD
Sbjct: 500 CKCGAITEAQKLHDRIGGQE-LVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPD 554
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 175/378 (46%), Gaps = 13/378 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ML YV G + A F M D+V W+++I+G +G R +V M
Sbjct: 84 DTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMS 143
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ D + L+++C L D G+ +H +++ L DV+ ++LVDMY K LD
Sbjct: 144 RRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLD 203
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A F M N V+WGA I+G QN +EL ++MQ G + SA +CA
Sbjct: 204 DALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCA 263
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L + +H + ++ F + V+GT+++D+Y+K G AR F + ++ + N
Sbjct: 264 AMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNA 323
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
++ G G EA+ LF M + V D + + + SA + E Y+ L V
Sbjct: 324 MMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACA-----EVKGYFQGLQVHCL 378
Query: 409 KIQPTEKHYAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
++ C ++DL + + EA + M ++ W A+++ ++ +
Sbjct: 379 AVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS-WNAIIAALEQNECYED 437
Query: 465 GEKVAKKVLK--LNPDDL 480
++L+ + PDD
Sbjct: 438 TIAHLNEMLRSGMEPDDF 455
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 130/252 (51%), Gaps = 2/252 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK+ L ++ +Y I A+KL + + + + ++NSII +S + E
Sbjct: 481 IKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQ 540
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+++M+ V+PD T+ L C +L +++G++I + ++ D ++ S+++++Y
Sbjct: 541 RFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMY 600
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M ++++ FEK ++ D V W++MI G +GQ EA++ ++RM++ + + +
Sbjct: 601 AKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFV 660
Query: 182 GLIQACADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS- 239
+++AC+ +G G H + R L ++ +VD+ ++ A ++M
Sbjct: 661 AVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPI 720
Query: 240 RINIVTWGALIS 251
+ V W L+S
Sbjct: 721 EADAVVWKTLLS 732
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 42/225 (18%)
Query: 288 CAQIG--FLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
CA G L G++ H V F + ++ MY++CG + A +FD M RD +
Sbjct: 27 CASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTV 86
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL--------VEE 396
SWN ++ +Y G + A SLF TM PD ++ +L+S G+ +E
Sbjct: 87 SWNTMLTAYVHAGDTDTAASLF----GTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEM 142
Query: 397 GRYWFDL--------------------------MVSKYKIQPTEKHYACMVDLLARAGEV 430
R L + K ++ + + +VD+ + +
Sbjct: 143 SRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSL 202
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
++AL+ M ++ W A ++GC +++++ G ++ ++ +L
Sbjct: 203 DDALRFFHGMGERNSVS-WGAAIAGCVQNEQYTRGMELFVQMQRL 246
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 307/529 (58%), Gaps = 23/529 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SA +LF++L R V ++NS+I Y LG+Y QM+ + D +T L C
Sbjct: 65 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 124
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L +G+ + A++ + + +++L++Y KCG ++ A+ FEKM +++V W+S
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G +G A+ ++M+KEG+ D V + ++ ACA G G VH Y +
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ ++ V +L+DMYAK G ++ A+ VF M +I++W ++ EL
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------EL-- 290
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+PDS ++ L ACA + L+ GK IHGY +R + + + +++D+Y KCG
Sbjct: 291 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
V AR LFD + S+DL+SW V+IA YG+HG+G EA++ F +M + ++PD +F S+L
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSGL+E+G +F +M + + I+P +HYACMVDLL+R G + +A K ++++ P
Sbjct: 404 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 463
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL GC + + EKVA++V +L P++ G + L++N +A +KWEEV +R+ +
Sbjct: 464 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIM-EDKSHNQYEDIVYVLKKLYLEMR 554
K G++K PG S +E+ G ++ F+ + SH + I +LKK+ +M+
Sbjct: 524 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 572
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 207/436 (47%), Gaps = 61/436 (13%)
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF---------------- 134
DLK G R+ + +V++ + M++ Y K G E++ F
Sbjct: 11 DLKEG----RRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESA 66
Query: 135 ----EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
+K+ +D++ W+SMI+G V NG + YK+M GID D ++ ++ CA
Sbjct: 67 SELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKS 126
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G G +VH +I+ + +L+DMY+K G LD A VF+ M N+V+W ++I
Sbjct: 127 GTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMI 186
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFD 309
+G+ ++G + + LL +M+ G + D V++ S L ACA+ G L GK +H Y
Sbjct: 187 AGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMA 246
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
NL + +++DMY+KCG A ++F M +D+ISWN ++ GE
Sbjct: 247 SNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------GE--------- 289
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ---PTEKHYA-CMVDLLA 425
+KPD T A +L A + +E G+ + Y ++ +++H A +VDL
Sbjct: 290 ----LKPDSRTMACILPACASLSALERGKE-----IHGYILRNGYSSDRHVANALVDLYV 340
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
+ G + A + D M L W +++ G H + +I + + PD++
Sbjct: 341 KCGVLGLARLLFD-MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 399
Query: 484 ALV---SNFFAMEQKW 496
+++ S+ +EQ W
Sbjct: 400 SILYACSHSGLLEQGW 415
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 30/392 (7%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK++ N ++ +Y D+ A ++FE++ R V ++ S+I Y+R +
Sbjct: 140 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 199
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L QM KE V+ D T L AC L G+++ +++FV ++++++Y
Sbjct: 200 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 259
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M A F M KD++ W++M+ L +P D M
Sbjct: 260 AKCGSMEGANSVFSTMVVKDIISWNTMVGEL----KP-----------------DSRTMA 298
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA L G +HGY +R + D V +LVD+Y K G L LA +F +
Sbjct: 299 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 358
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W +I+G+ +G + EM+ G EPD VS +S L AC+ G L+ G
Sbjct: 359 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF- 417
Query: 302 GYTVRRFDFN----LVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ + + DFN L ++D+ S+ G S A + + + D W ++ I+
Sbjct: 418 -FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
E A + ++ E ++P+++ + LL+ +
Sbjct: 477 HDIELAEKVAERVFE--LEPENTGYYVLLANI 506
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++ Y+ CG R +FD M+ +++ WN +++ Y G +E++ LF M+E ++
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
S AS L FD + + I + M+ G E L I
Sbjct: 62 RSESASEL---------------FDKLCDRDVIS-----WNSMISGYVSNGLTERGLGIY 101
Query: 438 DSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
M + LA +++L GC S+G+ V +K
Sbjct: 102 KQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIK 141
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/529 (35%), Positives = 309/529 (58%), Gaps = 15/529 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y + ARK+F+E+P R V ++ S+I+AY + E E L L+N+M + + D
Sbjct: 175 LVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFL--D 232
Query: 76 SSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ FTV + AC L L G+ + ++ G + ++ +S+LN+YVKCG + +A
Sbjct: 233 GNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSV 292
Query: 134 FEKMQRK------DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
F++ DLV W++MI G G P+ A++ + K I + V + L+ AC
Sbjct: 293 FDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSAC 352
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A L + G +H ++ L+ D ++ SLVDMYAK G + A +VF ++V+W
Sbjct: 353 AQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWN 411
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
++ISG+AQ+G A L+L M+ F PD+V++V L ACA +G ++G S+HG+ ++
Sbjct: 412 SVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKY 471
Query: 308 --FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
++ +GT++++ Y+KCG + AR +FD M ++ ++W +I G+ G G +L+L
Sbjct: 472 GLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLAL 531
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F M++ + P+ F +LL+A SHSG+VEEG FD M + P+ KHYACMVDLLA
Sbjct: 532 FRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLA 591
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG ++EAL +D M +PG+ V+ A L GC H F GE +++L+L+PD + L
Sbjct: 592 RAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVL 651
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE--VNGELHAFIME 532
+SN +A + +W V VR+ +++ G+ KVPG S+VE VN H +++
Sbjct: 652 ISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNNTTHVNVLQ 700
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 216/449 (48%), Gaps = 11/449 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN-QMIKEDVRP 74
+I+LY + AR LF LP ++ II + + V+ YN
Sbjct: 74 LISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGSFN 133
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D F++ LK L D+ + ++ ++ D FV +S+++ Y KCGK+ +A F
Sbjct: 134 DLVVFSILLKTASQLRDIVLTTKLHCNILK-SNAADSFVLTSLVDAYSKCGKLRDARKVF 192
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ + +V W+SMI V N E + + RM++ +D + + L+ AC LG
Sbjct: 193 DEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLH 252
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI------NIVTWGA 248
G VHGY I+ + ++ + TSL++MY K G + A VF S ++V W A
Sbjct: 253 QGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTA 312
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+I G+ Q G + LEL + + P+SV+L S L ACAQ+ + +GK +H V+
Sbjct: 313 MIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYG 372
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ L S++DMY+KCG+ A +F +D++SWN +I+ Y G EAL LF +
Sbjct: 373 LDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNR 432
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-ACMVDLLARA 427
M PD T +LSA + G + G + KY + + + +++ A+
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFAL-KYGLVSSSIYVGTALLNFYAKC 491
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G+ A + D M E W A++ GC
Sbjct: 492 GDATSARMVFDGMG-EKNAVTWAAMIGGC 519
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 311/575 (54%), Gaps = 34/575 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
++ +Y + A ++F L R +YN+++ Y ++ E L LY+ M ED ++P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TFT L C + + G +I + ++ V + ++++Y +CG++N A F
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 537
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+M ++ W+SMI G NG+ +EA+ +K+M+ GI D + ++ +C L DS+
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA----------------------- 231
G +H + +R + + +Q LVDMYAK G +D A
Sbjct: 598 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFV 657
Query: 232 --------SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
++F M + N W ++++G+A GL + +EM E D +++V+
Sbjct: 658 NSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVT 717
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
+ C+ + L+ G +H +++ + ++VL T+++DMYSKCG + AR +FD M +
Sbjct: 718 IVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK 777
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
+++SWN +I+ Y HG +EAL L+ +M + + P+ TF ++LSA SH+GLVEEG F
Sbjct: 778 NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIF 837
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
M Y I+ +HY CMVDLL RAG +E+A + V+ M EP ++ W ALL C HK
Sbjct: 838 TSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKD 897
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+G A+++ +L+P + G + ++SN +A +W+EV +R+ M+ G+KK PG S +E
Sbjct: 898 MDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIE 957
Query: 522 VNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+N E+ F K+H + E+I L+ L L+ + +
Sbjct: 958 INSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGL 992
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 268/516 (51%), Gaps = 23/516 (4%)
Query: 15 RIIALY---GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
+I+ LY G +D+ ARKLFEE+P R + +N++I+AY+R + EVL LY +M
Sbjct: 111 KILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSG 170
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D TF +KAC+++ D+ ++ V+ G ++FVG ++++ Y + G M++A+
Sbjct: 171 NFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAV 230
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ ++++ +V W+++I G V EA + RM K G+ D ++ C L
Sbjct: 231 TSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 290
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G VH I D V +L+DMYAK + VF M N VTW ++IS
Sbjct: 291 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 350
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
AQ G L L + MQ G++ + +L S L+A A + + G+ +HG+ VR +
Sbjct: 351 AEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNS 410
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM- 369
+++LG++++DMYSKCG+ A +F + R+ +S+N ++A Y G EEAL L+ M
Sbjct: 411 DIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQ 470
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLLA 425
E ++PD TF +LL+ ++ +GR + ++K I TE +V + +
Sbjct: 471 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE-----LVHMYS 525
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN---PDDLGI 482
G + A +I + M+ E W +++ G + + ++ K+ ++LN PD +
Sbjct: 526 ECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQ-MQLNGIKPDCFSL 583
Query: 483 HALVSNFFAM--EQKWEEVAG--VRKTMRKSGMKKV 514
+++S+ ++ QK E+ VR TM + G+ +V
Sbjct: 584 SSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV 619
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 200/449 (44%), Gaps = 50/449 (11%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
DV P ++ ++ C+ + G+ I + + GY D ++ + +L LY + G +++
Sbjct: 68 DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 131 MVA---FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE+M ++L W++MI E + Y RM+ G +D+ +I+AC
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ D + ++ LN ++ V +LVD YA+ G +D A + ++VTW
Sbjct: 186 IAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWN 245
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
A+I+G+ + + M G PD+ + SAL C + GK +H +
Sbjct: 246 AVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIAC 305
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F + +G ++IDMY+KC +FD+M R+ ++WN II++ GH +AL LF
Sbjct: 306 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 365
Query: 367 LQMIETMVKPDHSTFASLL-------------------------------SAL----SHS 391
L+M E+ K + S+L SAL S
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC 425
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA---- 447
G+VEE F ++ + E Y ++ + G+ EEAL++ M +E G+
Sbjct: 426 GMVEEAHQVFRSLLER-----NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQF 480
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+ LL+ C N + + G ++ +++ N
Sbjct: 481 TFTTLLTLCANQRNDNQGRQIHAHLIRAN 509
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 28/301 (9%)
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
K D + + LIQ C D + G S+H I N D + T ++ +YA++G LD
Sbjct: 64 KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 230 ---LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
A +F+ M N+ W +I +A+ L L M+ G D + S +
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIK 183
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC + + + + V+ + NL +G +++D Y++ G A D+++ +++
Sbjct: 184 ACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVT 243
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLV 394
WN +IA Y EEA +F +M++ V PD+ TFAS L HS L+
Sbjct: 244 WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G + D V ++D+ A+ + E LK+ D M E W +++S
Sbjct: 304 ACG-FKGDTFVGN-----------ALIDMYAKCDDEESCLKVFDEMG-ERNQVTWNSIIS 350
Query: 455 G 455
Sbjct: 351 A 351
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 313/552 (56%), Gaps = 13/552 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N ++ ++F+E+P R V ++N++I + + + L L+ +M P+
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + TVA+ AC L+ L+ G+EI RK V+ G+ D +V S+++++Y KC + A F+
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM RK LV W+SMI G V G + V+ RM EG + + ++ AC+ +
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY IR +N D+ V SL+D+Y K G +LA VF + +W +IS +
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYIS 387
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVL 314
G +E+ +M S G +PD V+ S L AC+Q+ L+ GK IH + R + + +L
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL 447
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMYSKCG A +F+ + +D++SW V+I++YG HG EAL F +M + +
Sbjct: 448 LSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD T ++LSA H+GL++EG +F M SKY I+P +HY+CM+D+L RAG + EA
Sbjct: 508 KPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 435 KIV-DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+I+ + T + L S C H + S+G+++A+ +++ PDD + ++ N +A
Sbjct: 568 EIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASG 627
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ W+ VR M++ G++K PG S +E++ ++ F ED+SH + E++ L
Sbjct: 628 ESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL------- 680
Query: 554 RAISSWLQGHME 565
+ L GHME
Sbjct: 681 ----ALLSGHME 688
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 256/477 (53%), Gaps = 7/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-R 73
+I +Y D SAR +FE +R V +NS++ YS+ + L ++ +++ +
Sbjct: 45 LINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICV 104
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PDS TF +KA +L +G I V+ GY DV V SS++ +Y K ++
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M +D+ W+++I+ +G+ +A++ + RM+ G + + V + I AC+ L
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +++ LD V ++LVDMY K L++A VF+ M R ++V W ++I G+
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
G + S +E+L M G P +L S L+AC++ L GK IHGY +R + ++
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI 344
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S+ID+Y KCG + A +F + Q SWNV+I+SY G+ +A+ ++ QM+
Sbjct: 345 YVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPD TF S+L A S +E+G+ L +S+ +++ E + ++D+ ++ G +E
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKE 463
Query: 433 ALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
A +I +S+ + + W ++S G H + ++ + + L PD + + A++S
Sbjct: 464 AFRIFNSI-PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 183/364 (50%), Gaps = 7/364 (1%)
Query: 75 DSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+SS L+ C S L+ + + ++ + LG DV + S++N+Y C A
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 134 FEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLG 191
FE R D+ W+S+++G N + ++ +KR+ I D +I+A LG
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H ++ DV V +SLV MYAK + + VF M ++ +W +IS
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
F Q+G A LEL M+S GFEP+SVSL A+ AC+++ +L+ GK IH V++ F+
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ + ++++DMY KC AR +F +M + L++WN +I Y G + + + +MI
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGE 429
+P +T S+L A S S + G++ ++ + + + C ++DL + GE
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR--SVVNADIYVNCSLIDLYFKCGE 359
Query: 430 VEEA 433
A
Sbjct: 360 ANLA 363
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 293/534 (54%), Gaps = 1/534 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY D+ +A +F V +N +++A+ + + L+ QM +R
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C ++ +GE+I +V+ G+ +D++V ++++Y K G + +A
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
E ++ KD+V W+SMI G V + ++A+ A+K M+K GI D + + I CA +
Sbjct: 403 LEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM 462
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R GL +H + DV + +LV++YA+ G + A F+ + + +TW L+SGF
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGF 522
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+GL L++ M M G + + + VSAL A A + +K GK IH ++ F
Sbjct: 523 AQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G ++I +Y KCG A+ F +M R+ +SWN II S HG G EAL LF QM +
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+ TF +L+A SH GLVEEG +F M +Y I+P HYAC++D+ RAG+++
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K ++ M VW LLS C HK +GE AK +L+L P D + L+SN +A+
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+KW VRK MR G++K PG S +EV +HAF + D+ H E I L
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 226/442 (51%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR++FEEL R ++ +++ Y++ E LGLY QM + V P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L +C G I + + G+ +++FVG++++ LY++CG A F
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V ++++I+G G A++ ++ M+ G+ D V + L+ ACA LGD +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y + ++ D ++ SL+D+Y K G ++ A +F + R N+V W ++ F Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ EL +MQ+ G P+ + L C + LG+ IH +V+ F+ ++ +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK G AR + + ++ +D++SW +IA Y H ++AL+ F +M + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 375 KPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ AS +S + + +G + + VS Y + + +V+L AR G + EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS--IWNALVNLYARCGRIREA 500
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + + W L+SG
Sbjct: 501 FSSFEEIEHKDEI-TWNGLVSG 521
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 219/453 (48%), Gaps = 6/453 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEE 97
RG + + + E P +VL L+ ++ F AL+AC + ++ E
Sbjct: 4 RGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I KAV G G VG+ +++LY K G + A FE++ +D V W +M++G NG
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA+ Y++M + G+ V+ ++ +C G +H + ++ V +
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
++ +Y + G LA VF +M + VT+ LISG AQ G LE+ EMQ G PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V++ S L ACA +G L+ G +H Y + + ++ S++D+Y KCG A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ WN+++ ++G ++ LF QM ++P+ T+ +L + + ++
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G L V K + ++D+ ++ G +E+A ++++ M E + W ++++G
Sbjct: 364 GEQIHSLSV-KTGFESDMYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGY 421
Query: 457 HNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
H+ K++ K PD++G+ + +S
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAIS 454
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/561 (32%), Positives = 305/561 (54%), Gaps = 33/561 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF +P N ++ +SR +P L LY + + D +F LKA
Sbjct: 68 ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127
Query: 89 LMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L L +G EI A + G+ + D F+ S+++ +Y CG++ +A F+KM +D+V W+
Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNI 187
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI+G N + Y+ MK G + D +++ ++ ACA G+ +G ++H +
Sbjct: 188 MIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNG 247
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHV-------------------------------FK 236
+ +QTSLV+MYA G + LA V F
Sbjct: 248 FRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFD 307
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M ++V W A+ISG+A++ L+L EMQ PD ++++S + ACA +G L
Sbjct: 308 RMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQ 367
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
K IH Y + F L + ++IDMY+KCG AR +F+ M +++ISW+ +I ++ +
Sbjct: 368 AKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 427
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HG + A++LF +M E ++P+ TF +L A SH+GLVEEG+ +F M+++++I P +
Sbjct: 428 HGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQRE 487
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVDL RA + +A++++++M P + +W +L+S C NH + +GE A ++L+L
Sbjct: 488 HYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLEL 547
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
PD G ++SN +A E++W++V VRK M+ G+ K S +EVN E+H F+M D+
Sbjct: 548 EPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRY 607
Query: 536 HNQYEDIVYVLKKLYLEMRAI 556
H Q ++I L + +++ +
Sbjct: 608 HKQSDEIYKKLDAVVSQLKLV 628
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 192/407 (47%), Gaps = 36/407 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y I+ AR LF+++ R V T+N +I YS+ VL LY +M PD
Sbjct: 157 LIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPD 216
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN------- 128
+ L AC +L G+ I + + G+ + +S++N+Y CG M+
Sbjct: 217 AIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYD 276
Query: 129 ------------------------EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+A F++M KDLVCWS+MI+G + QP EA+
Sbjct: 277 QLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQL 336
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ M++ I D++ M+ +I ACA++G +H Y+ + + + +L+DMYAK
Sbjct: 337 FNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAK 396
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G+L A VF+NM R N+++W ++I+ FA +G A S + L M+ EP+ V+ +
Sbjct: 397 CGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGV 456
Query: 285 LLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SR 341
L AC+ G ++ G+ + R ++D+Y + A L + M
Sbjct: 457 LYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPP 516
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
++I W ++++ HGE L F ++PDH +LS +
Sbjct: 517 NVIIWGSLMSA--CQNHGEIELGEFAATRLLELEPDHDGALVVLSNI 561
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 293/534 (54%), Gaps = 1/534 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY D+ +A +F V +N +++A+ + + L+ QM +R
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C ++ +GE+I +V+ G+ +D++V ++++Y K G + +A
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
E ++ KD+V W+SMI G V + ++A+ A+K M+K GI D + + I CA +
Sbjct: 403 LEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM 462
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R GL +H + DV + +LV++YA+ G + A F+ + + +TW L+SGF
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGF 522
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+GL L++ M M G + + + VSAL A A + +K GK IH ++ F
Sbjct: 523 AQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G ++I +Y KCG A+ F +M R+ +SWN II S HG G EAL LF QM +
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+ TF +L+A SH GLVEEG +F M +Y I+P HYAC++D+ RAG+++
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K ++ M VW LLS C HK +GE AK +L+L P D + L+SN +A+
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+KW VRK MR G++K PG S +EV +HAF + D+ H E I L
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 226/442 (51%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR++FEEL R ++ +++ Y++ E LGLY QM + V P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L +C G I + + G+ +++FVG++++ LY++CG A F
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V ++++I+G G A++ ++ M+ G+ D V + L+ ACA LGD +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y + ++ D ++ SL+D+Y K G ++ A +F + R N+V W ++ F Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ EL +MQ+ G P+ + L C + LG+ IH +V+ F+ ++ +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK G AR + + ++ +D++SW +IA Y H ++AL+ F +M + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 375 KPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ AS +S + + +G + + VS Y + + +V+L AR G + EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS--IWNALVNLYARCGRIREA 500
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + + W L+SG
Sbjct: 501 FSSFEEIEHKDEI-TWNGLVSG 521
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 219/453 (48%), Gaps = 6/453 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEE 97
RG + + + E P +VL L+ ++ F AL+AC + ++ E
Sbjct: 4 RGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I KAV G G VG+ +++LY K G + A FE++ +D V W +M++G NG
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA+ Y++M + G+ V+ ++ +C G +H + ++ V +
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
++ +Y + G LA VF +M + VT+ LISG AQ G LE+ EMQ G PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V++ S L ACA +G L+ G +H Y + + ++ S++D+Y KCG A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ WN+++ ++G ++ LF QM ++P+ T+ +L + + ++
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G L V K + ++D+ ++ G +E+A ++++ M E + W ++++G
Sbjct: 364 GEQIHSLSV-KTGFESDMYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGY 421
Query: 457 HNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
H+ K++ K PD++G+ + +S
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAIS 454
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 314/587 (53%), Gaps = 48/587 (8%)
Query: 15 RIIALYGGKNDIVSARKLFEEL--------PLRGVDTYNSIIIAYS----RKESPFEVLG 62
R++A + +D S R L L P YN+ A S R L
Sbjct: 48 RLVAAFA-LSDPASPRPLLHALAILASLPSPPDSASPYNAAFRALSLCPHRHLVDRHCLP 106
Query: 63 LYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
LY ++ RPD TF LKAC L G + +LG+ DVFV ++ ++ +
Sbjct: 107 LYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFW 166
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG--IDADEVV 179
G M A F++ +D+V W+++I G V +G PREA++ + R+ ++G + DEV
Sbjct: 167 SVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVT 226
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
M+G + CA +GD G +H + + + V++ +++DMY K G L+LA VF+ +
Sbjct: 227 MIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERID 286
Query: 240 RINIVTW-------------------------------GALISGFAQNGLAGSTLELLME 268
+V+W AL++G+ QN + L E
Sbjct: 287 NKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHE 346
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
MQ +P+ +++V+ L AC+Q+G L++G +H Y R + ++ LGTS++DMY+KCG
Sbjct: 347 MQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGN 406
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F ++ ++ ++W +I HGH +EA+ F +MI+ ++PD TF +LSA
Sbjct: 407 IKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
H+GLV+EGR +F LM KY ++ KHY+CM+DLL RAG ++EA ++V++M +P
Sbjct: 467 CCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAV 526
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW AL C H ++GEK A K+++L+P D GI+ L++N +A ++ VR MR
Sbjct: 527 VWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMR 586
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G++KVPG S +E+NG +H FI++DKSH I L + L+M+
Sbjct: 587 HLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMK 633
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 311/542 (57%), Gaps = 2/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ A KLF+ +P R + ++ ++I S+ E + + M P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ A++AC SL ++MG+++ A++ G G+++FVGS++ ++Y KCG M +A FE
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KD V W++MI+G G+ EA+ A+K+M E + D+ V+ + AC L +F
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFA 254
G SVH ++ D+ V +L DMY+K G ++ AS+VF S N+V++ LI G+
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+ L + +E++ G EP+ + S + ACA L+ G +H ++ FD +
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF 345
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ + ++DMY KCG+ A FD++ I+WN +++ +G HG G++A+ +F +M++
Sbjct: 346 VSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRG 405
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
VKP+ TF SLL+ SH+GLVEEG +F M Y + P E+HY+C++DLL RAG ++EA
Sbjct: 406 VKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEA 465
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ ++ M EP W + L C H +G+ A+K++KL P + G L+SN +A E
Sbjct: 466 KEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANE 525
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++WE+V VR MR +KK+PGYS V+V + H F ED SH + I L L ++
Sbjct: 526 RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQI 585
Query: 554 RA 555
+A
Sbjct: 586 KA 587
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 193/367 (52%), Gaps = 8/367 (2%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L+ G+++ + GY F+ + ++N+Y KCG+++ A+ F+ M +++LV W++MI+G
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
L N + EA+ + M+ G + I+ACA LG G +H +++ + +
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V ++L DMY+K G + A VF+ M + V+W A+I G+++ G L +M
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
D L S L AC + K G+S+H V+ F+ ++ +G ++ DMYSK G
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260
Query: 331 ARALFD-QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F + R+++S+ +I Y E+ LS+F+++ ++P+ TF+SL+ A +
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ +E+G L KI E + + +VD+ + G +E+A++ D + +P
Sbjct: 321 NQAALEQGT---QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEI 376
Query: 448 VWVALLS 454
W +L+S
Sbjct: 377 AWNSLVS 383
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 330/619 (53%), Gaps = 63/619 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQM---IK 69
++A+Y + A +F+E+ +G+D ++NSI+ A+ + +P L L+++M +
Sbjct: 190 LVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVH 249
Query: 70 EDV---RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
E R D + L AC SL L +EI A+ G D FV +++++ Y KCG
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGS 309
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ----------------------------- 157
MN+A+ F M+ KD+V W++M+ G +G
Sbjct: 310 MNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG 369
Query: 158 ------PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL--- 208
+EA+DA+++M +G + + V ++ L+ ACA LG G+ +H YS+++ L
Sbjct: 370 YAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSL 429
Query: 209 ---------NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI--NIVTWGALISGFAQNG 257
D+ V +L+DMY+K A +F ++ R N+VTW +I G+AQ G
Sbjct: 430 DNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYG 489
Query: 258 LAGSTLELLMEMQSCGFE--PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---L 312
+ L++ EM S + P++ ++ L+ACA + L++GK IH Y R ++
Sbjct: 490 DSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVY 549
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +IDMYSKCG AR +FD M R+ +SW +++ YG+HG G+EAL +F +M +
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKA 609
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD +F LL A SHSG+V++G +FD+M Y + + +HYAC++DLLAR G +++
Sbjct: 610 GFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDK 669
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K + M EP +WVALLS C H + E K++ + ++ G + L+SN +A
Sbjct: 670 AWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYAN 729
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++W++VA +R+ M+KSG+KK PG S V+ +F + D+SH +I +L++L
Sbjct: 730 ARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGR 789
Query: 553 MRAISSWLQGHMEEHEEHD 571
++ + + + H+ D
Sbjct: 790 IKVMGYVPETNFALHDVDD 808
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 238/492 (48%), Gaps = 65/492 (13%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+G+ +M++ +PD T ALKAC L G + G+ ++VFV ++++
Sbjct: 132 RAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALV 191
Query: 119 NLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRM------K 169
+Y +CG + +A + F+++ RK D++ W+S++ V PR A++ + M K
Sbjct: 192 AMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEK 251
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+D + ++ ++ ACA L +H Y+IR D V +L+D YAK G ++
Sbjct: 252 ATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMN 311
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS------------------ 271
A VF M ++V+W A+++G+ Q+G G+ EL M+
Sbjct: 312 DAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYA 371
Query: 272 ---C--------------GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN--- 311
C G EP+SV+++S L ACA +G L G IH Y++++ +
Sbjct: 372 QRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDN 431
Query: 312 ----------LVLGTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHG 359
L++ ++IDMYSKC AR++FD + + R++++W V+I Y +G
Sbjct: 432 DFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDS 491
Query: 360 EEALSLFLQMIET--MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+AL +F +MI V P+ T + +L A +H + G+ + ++ +P+
Sbjct: 492 NDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFV 551
Query: 418 A-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
A C++D+ ++ G+V+ A + DSM ++ W +++SG H + + K+ K
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Query: 477 --PDDLGIHALV 486
PDD+ L+
Sbjct: 611 FVPDDISFLVLL 622
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 164/337 (48%), Gaps = 17/337 (5%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+ ++ Y+ CG +A+ E++ V W+ ++ + G A+ RM + G
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
D + ++AC +L G ++HG +V V +LV MY++ G L+ AS
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 233 HVFKNMSRI---NIVTWGALISGFAQNGLAGSTLELLMEM------QSCGFEPDSVSLVS 283
VF ++R ++++W ++++ + + LEL EM ++ D +S+V+
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L ACA + L K IH Y +R F + + ++ID Y+KCG + A +F+ M+ +D
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SWN ++ Y G+ A LF M + + D T++++++ + G +E F
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 403 LMVSKYKIQPTEKHYACMVDLL---ARAGEVEEALKI 436
M+ + +E + ++ LL A G + + ++I
Sbjct: 385 QMI----LDGSEPNSVTIISLLSACASLGALSQGMEI 417
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 308/558 (55%), Gaps = 34/558 (6%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI A +F++ L +N++I Y + P + QMI+ DS +F ALK
Sbjct: 101 DIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALK 160
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC + +G + + G+ +D+FV + ++ YV+ G + A F++ KD+V
Sbjct: 161 ACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVT 220
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W++MING N EA+ + M + +EV M+ L+ AC+ GDS G ++H +
Sbjct: 221 WTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIR 280
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
R+ + + + +++DMY K G L A +F NM R ++ +W +L++G+A+NG GS +
Sbjct: 281 RKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARK 340
Query: 265 LLMEMQS--------------------------------CGFEPDSVSLVSALLACAQIG 292
L EM G P +LV L A Q+G
Sbjct: 341 LFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLG 400
Query: 293 FLKLGKSIHGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
L++G+ IH V + +L+L +V+DMY+KCG A LF M ++L+SWN +I
Sbjct: 401 CLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMI 460
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
++Y +GH ++AL+LF QMI + +KPDH TF +LSA S+ G V EG+ F+ M + + +
Sbjct: 461 SAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGV 520
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+P +HYACMVDLL+R G ++EA +++ M E W ALL C H + + +
Sbjct: 521 EPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGE 580
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
K+L+L+P+D GI++L++N A +KW++V VR+ MR+ G+KKVPG+S++E+ G+ H F+
Sbjct: 581 KLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFL 640
Query: 531 MEDKSHNQYEDIVYVLKK 548
+ D SH + +I V+ +
Sbjct: 641 VADTSHTRSSEIYRVVNE 658
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 221/490 (45%), Gaps = 66/490 (13%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV--KCGKMNEAMVAFEKMQRK 140
L++C S+ LK +I G N +F S +L G ++ A + F++ +
Sbjct: 59 LQSCSSMFQLK---QIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELP 115
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ W++MI G P +++M + + D + ++AC + G++VH
Sbjct: 116 NCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVH 175
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+R + D+ VQ L+ Y +TG L A +F S ++VTW +I+G+A+N
Sbjct: 176 SVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLD 235
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSV 318
+ L M S +P+ V++++ L AC+Q G ++GK++H + +RR D +L L ++
Sbjct: 236 EAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEH-IRRKDITCSLNLLNAM 294
Query: 319 IDMYSKCGVPSC-------------------------------ARALFDQMQSRDLISWN 347
+DMY KCG + AR LFD+M R+++SWN
Sbjct: 295 LDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWN 354
Query: 348 VIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+IA Y + EAL LF M++ + + P T +LSA G +E G+ V+
Sbjct: 355 AMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVN 414
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CHNHKKF 462
K IQ + ++D+ A+ G ++ A K+ SM E L W +++S H K
Sbjct: 415 KIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSM-PEKNLVSWNSMISAYASYGHAKKAL 473
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVS-------------------NFFAMEQKWEEVAGVR 503
++ +++ LK PD + ++S N F +E K E A +
Sbjct: 474 TLFDQMIGSGLK--PDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMV 531
Query: 504 KTMRKSGMKK 513
+ + G+ K
Sbjct: 532 DLLSRVGLLK 541
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 6/243 (2%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRPDSST 78
Y D+ SARKLF+E+P R + ++N++I YS+ P E L L++ M+ + P T
Sbjct: 329 YAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDT 388
Query: 79 FTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
L A L L+MG+EI V ++G + + ++++++Y KCG ++ A F M
Sbjct: 389 LVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSM 448
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
K+LV W+SMI+ G ++A+ + +M G+ D + +G++ AC+ G G
Sbjct: 449 PEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEG- 507
Query: 198 SVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFA 254
H S+ ++ K + +VD+ ++ G L A + M + WGAL+
Sbjct: 508 QAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACR 567
Query: 255 QNG 257
++G
Sbjct: 568 KHG 570
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I +A KLF +P + + ++NS+I AY+ + L L++QMI ++PD
Sbjct: 428 VMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPD 487
Query: 76 SSTFTVALKAC 86
TF L AC
Sbjct: 488 HITFIGVLSAC 498
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 302/510 (59%), Gaps = 3/510 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I +R +F+E R V +++S+I Y + + L L+N+M +E + +
Sbjct: 143 LVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEAN 202
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + + AC L L G+ + ++ G ++ +++L+LY KCG + +A F+
Sbjct: 203 QITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFD 262
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ D+V W++MI G NG P EA+ + + ++ + ++V + + +C+ L +
Sbjct: 263 ELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNL 322
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+HG SI+ + D V SLVD YAK A +VF+ +S ++V W ++IS F+Q
Sbjct: 323 GRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQ 381
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
NG A LEL +M+ PD+V+LVS L ACA + L++G S H Y V+R N+
Sbjct: 382 NGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVY 441
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+GT+++ Y+KCG AR +FD M + ++W+ +I+ YGI G+G +LS+F M++
Sbjct: 442 VGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAE 501
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP+ F S+LSA SH+G++ EG F ++ Y + P+ KHY CMVDLLARAG ++EA
Sbjct: 502 LKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEA 561
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L + M +P ++++ A L GC H +F +GE K++L+L+P D + L+ N +A +
Sbjct: 562 LDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASD 621
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+W +V VR+ M++ G+ K PG S++E++
Sbjct: 622 ARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 236/441 (53%), Gaps = 2/441 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++LYG + AR +F+ +P ++ II Y +++G YN+M
Sbjct: 42 KLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKEC 101
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ F+ LKAC + G ++ + V+ G D FV + ++++Y KCG++ + F
Sbjct: 102 DNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVF 160
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ +++ WSSMI G V N ++ + + RM++E I+A+++ + L+ AC LG
Sbjct: 161 DENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALH 220
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY I+ + L + T+L+D+YAK G + A VF + I+IV+W A+I G+
Sbjct: 221 QGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYT 280
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QNG L+L ++ + P+ V++ S +C+Q+ L LG+SIHG +++ + ++
Sbjct: 281 QNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIV 340
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++D Y+KC + AR +F+ + RD+++WN II+++ +G EAL LF QM V
Sbjct: 341 TNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSV 400
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T S+LSA + ++ G + V + + ++ A+ G+ E A
Sbjct: 401 LPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESAR 460
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
I D M + W A++SG
Sbjct: 461 VIFDGMD-QKSTVTWSAMISG 480
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 185/352 (52%), Gaps = 7/352 (1%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G D+ + +++LY G+++ A + F+ + D + W +I N + R+ V Y
Sbjct: 32 GLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFY 91
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
RM+ + D VV +++AC++ + G VH I + N D V T LVDMYAK
Sbjct: 92 NRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHC-QIVKFGNPDSFVFTGLVDMYAKC 150
Query: 226 GHLDLASHVF-KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G ++ + VF +N+ R N+ +W ++I+G+ QN LA L L M+ E + ++L
Sbjct: 151 GEIECSRSVFDENLDR-NVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGIL 209
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
+ AC ++G L GK +HGY ++ + L T+++D+Y+KCGV AR++FD++ D+
Sbjct: 210 VHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDI 269
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SW +I Y +G EEAL LFLQ + V P+ T AS+ S+ S + GR L
Sbjct: 270 VSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGL 329
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ P + +VD A+ +A + +++S +A W +++S
Sbjct: 330 SIKLGSRDPIVTN--SLVDFYAKCQMNRDARYVFETISDRDVVA-WNSIISA 378
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 210/456 (46%), Gaps = 45/456 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK + V ++ LY + AR +F+EL + ++ ++I+ Y++ P E
Sbjct: 229 LIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEA 288
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ Q + V P+ T +C L++L +G I +++LG D V +S+++
Sbjct: 289 LKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDF 347
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC +A FE + +D+V W+S+I+ NG EA++ + +M+ + D V +
Sbjct: 348 YAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTL 407
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ ACA L + G S H Y+++R L+ +V V T+L+ YAK G + A +F M
Sbjct: 408 VSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMD 467
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ + VTW A+ISG+ G +L + +M +P+ S L AC+ G +G+
Sbjct: 468 QKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGM--IGEG 525
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
+T+ D+NLV T + C V ARA G
Sbjct: 526 WRLFTMICQDYNLVPSTK----HYTCMVDLLARA-----------------------GRL 558
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK-HYA 418
+EAL +M V+PD S F + L + G M+ ++ P + +Y
Sbjct: 559 KEALDFIQKM---PVQPDVSLFGAFLHGCGLHSRFDLGELAIKRML---ELHPGDACYYV 612
Query: 419 CMVDLLA------RAGEVEEALKIVDSMSTEPGLAV 448
M +L A + +V E +K M T PG ++
Sbjct: 613 LMCNLYASDARWSKVKQVRELMKQRGLMKT-PGCSL 647
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 144/299 (48%), Gaps = 14/299 (4%)
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+ +H Y + + L D+ T LV +Y G LDLA VF + + ++W +I + N
Sbjct: 22 MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLN 81
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGT 316
+ M+ C E D+V L AC++ G+ +H V+ + + + T
Sbjct: 82 SEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSFVFT 141
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++DMY+KCG C+R++FD+ R++ SW+ +IA Y + ++ L LF +M E +++
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEA 201
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ T L+ A G + +G+ W + K I+ ++DL A+ G V +A +
Sbjct: 202 NQITLGILVHACKKLGALHQGK-WLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSV 260
Query: 437 VDSMSTEPGLAVWVALL-----SGCHNH--KKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
D + + W A++ +GC K F E+VA + P+D+ I ++ S+
Sbjct: 261 FDELHG-IDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVA-----VLPNDVTIASVFSS 313
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 296/512 (57%), Gaps = 9/512 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y ++ A+ +F ++ + +NS+I YS ESP E L +Y +M ++ PD TF
Sbjct: 49 YSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTF 108
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
LKAC + +G+ + V+ G+ DV+ +++L +Y CG M A+ F+ + +
Sbjct: 109 PFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPK 168
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++V W+S+I G + N P EAV YK M+ + +E+ M+ ++ ACA D G V
Sbjct: 169 WNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWV 228
Query: 200 HGYS-------IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
H + + + N +V + T++VDMYAK G L A +F M N+V W ++I
Sbjct: 229 HDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGA 288
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
+ Q G A L+L +M+ GF+PD + + + ACA +G L G+++H Y + +
Sbjct: 289 YNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDD 348
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+GT+++DMY+K G A+ +F ++Q +D+ +W +I +HGHGEEAL+ F +M E
Sbjct: 349 TAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQE 408
Query: 372 -TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
T + PD T+ +LSA SH G VE+G+ F M + + I+PT +HY CMVDLL+RAG +
Sbjct: 409 DTALIPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRL 468
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA ++V+ M EP A+W ALL+GC ++ + ++V ++V +L D G++ L+SN +
Sbjct: 469 GEAERLVEKMPVEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIY 528
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
A +WEEV R+ M++ ++K G+S VE+
Sbjct: 529 AGACRWEEVKMARELMKERKIQKSLGHSSVEM 560
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 152/307 (49%), Gaps = 8/307 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT + ++ +Y D+ +A K+F+++P V + S+I + P E
Sbjct: 131 IVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEA 190
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-------DVFV 113
+ +Y M V P+ T L AC DL G + + ++G +V +
Sbjct: 191 VRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVIL 250
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
++++++Y KCG + A F KM ++LV W+SMI GQ EA+D + M+ G
Sbjct: 251 ATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGF 310
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D D+ + +I ACA LG G ++H Y + +L D + T+LVDMYAK+G + A
Sbjct: 311 DPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQ 370
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIG 292
VF + + ++ W +LI G A +G L +MQ PD ++ + L AC+ +G
Sbjct: 371 VFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVG 430
Query: 293 FLKLGKS 299
++ GK+
Sbjct: 431 KVEDGKN 437
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 126/241 (52%), Gaps = 5/241 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + +AR LF ++P R + +NS+I AY++ E L L++ M PD
Sbjct: 254 IVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPD 313
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF + AC L L G+ + + +D +G++++++Y K G A F
Sbjct: 314 KATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFS 373
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSR 194
++Q+KD+ W+S+I GL +G EA+ +K+M+++ + DE+ +G++ AC+ +G
Sbjct: 374 ELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVE 433
Query: 195 FGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
G + H S++ ++ Q +VD+ ++ G L A + + M N W AL++
Sbjct: 434 DGKN-HFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLN 492
Query: 252 G 252
G
Sbjct: 493 G 493
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 298/529 (56%), Gaps = 1/529 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F + YN +I + K SP L L+ +M ++ V+ D TF+ LKAC
Sbjct: 74 ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L+ GE++ ++ G+ ++ FV ++++ +Y CG++ A F+ M + +V W+SM
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSM 193
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++G NG E V ++++ + I+ D+V M+ ++ AC L + G + Y + + L
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + TSL+DMYAK G +D A +F M + ++V W A+ISG+AQ L L E
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE 313
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGV 327
MQ P+ V++VS L +CA +G + GK +H Y ++ + LGT +ID Y+KCG
Sbjct: 314 MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ +F +M +++ +W +I +G G+ AL F M+E VKP+ TF +LSA
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+ LV++GR+ F+ M + I+P +HY CMVD+L RAG +EEA + +D+M P
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAV 493
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW LL+ C HK + EK + + +L P G + L+SN +A+ + E+ VR ++
Sbjct: 494 VWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIK 553
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ +KK+PG S++E++G +H F ED H ++I L K+ +++ +
Sbjct: 554 EKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRL 602
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 191/374 (51%), Gaps = 5/374 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I AR +F+ +P R + +NS++ Y++ EV+ L+ ++++ + D
Sbjct: 162 LIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFD 221
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L +L++GE I V G + + +S++++Y KCG+++ A F+
Sbjct: 222 DVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFD 281
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M ++D+V WS+MI+G + +EA++ + M+K + +EV M+ ++ +CA LG
Sbjct: 282 EMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYET 341
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y ++ + L V + T L+D YAK G++D + VFK MS N+ TW ALI G A
Sbjct: 342 GKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLAN 401
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG LE M +P+ V+ + L AC+ + G+ + R FD +
Sbjct: 402 NGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIE 461
Query: 316 T--SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++D+ + G A D M + + W ++AS H + E A + T
Sbjct: 462 HYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHI--T 519
Query: 373 MVKPDHSTFASLLS 386
++P HS LLS
Sbjct: 520 RLEPAHSGDYILLS 533
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 8/276 (2%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK--TGHLDLASHVFKNMSR 240
++Q C D + VH + ++ LD + ++++ A +D A +F ++ +
Sbjct: 27 ILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK 83
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ +I G A + L L +M + D + S L AC+++ L+ G+ +
Sbjct: 84 PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ F N + ++I MY+ CG AR +FD M R +++WN +++ Y +G
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+E + LF +++E ++ D T S+L A +E G + +VSK ++
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSK-GLRRNNTLTTS 262
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G+V+ A K+ D M +A W A++SG
Sbjct: 263 LIDMYAKCGQVDTARKLFDEMDKRDVVA-WSAMISG 297
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 310/542 (57%), Gaps = 2/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ A KLF+ +P R + ++ ++I S+ E + + M P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ A++AC SL ++MG+++ A++ G G+++FVGS++ ++Y KCG M +A FE
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KD V W++MI+G G+ EA+ A+K+M E + D+ V+ + AC L +F
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFA 254
G SVH ++ D+ V +L DMY+K G ++ AS+VF S N+V++ LI G+
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+ L + +E++ G EP+ + S + ACA L+ G +H ++ FD +
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF 345
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ + ++DMY KCG+ A FD++ I+WN +++ +G HG G++A+ F +M++
Sbjct: 346 VSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRG 405
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
VKP+ TF SLL+ SH+GLVEEG +F M Y + P E+HY+C++DLL RAG ++EA
Sbjct: 406 VKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEA 465
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ ++ M EP W + L C H +G+ A+K++KL P + G L+SN +A E
Sbjct: 466 KEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANE 525
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++WE+V VR MR +KK+PGYS V+V + H F ED SH + I L L ++
Sbjct: 526 RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQI 585
Query: 554 RA 555
+A
Sbjct: 586 KA 587
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 192/367 (52%), Gaps = 8/367 (2%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L+ G+++ + GY F+ + ++N+Y KCG+++ A+ F+ M +++LV W++MI+G
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
L N + EA+ + M+ G + I+ACA LG G +H +++ + +
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V ++L DMY+K G + A VF+ M + V+W A+I G+++ G L +M
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
D L S L AC + K G+S+H V+ F+ ++ +G ++ DMYSK G
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260
Query: 331 ARALFD-QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F + R+++S+ +I Y E+ LS+F+++ ++P+ TF+SL+ A +
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ +E+G L KI E + + +VD+ + G +E A++ D + +P
Sbjct: 321 NQAALEQGT---QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTEI 376
Query: 448 VWVALLS 454
W +L+S
Sbjct: 377 AWNSLVS 383
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 312/573 (54%), Gaps = 38/573 (6%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
++G++++ D+ A KLF+++P +N +I YS P + L LY +M+ +
Sbjct: 70 TLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDG 129
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ P+ T LKAC + +G + ++ +LG G+ V +++LN+YV CG + A
Sbjct: 130 ILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSAR 189
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + + LV W+SMING G+ EAV ++ M++ G++ D ++GL+ G
Sbjct: 190 RVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHG 249
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G VH + + + +D V +L+DMYAK G+L A VF M ++V+W +I+
Sbjct: 250 NFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMIN 309
Query: 252 GFAQNGLAGSTLE-------------------------------LLMEMQSCGFEPDSVS 280
+A +GL LE L M G + +
Sbjct: 310 AYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTT 369
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFD 336
LV+ L +C+ +G L LGK H Y FD N+ L + +IDMY+KCG A +F
Sbjct: 370 LVAILSSCSHMGDLALGKQAHSYI---FDNNITLSATLCNAIIDMYAKCGALQTAMDVFF 426
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
M ++ +SWNVII + +HG+G+EA+ +F +M + V PD TF LLSA SHSGLV+
Sbjct: 427 GMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDT 486
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G+++F++M + I P +HYACMVDLL R G + EA+ ++ M +P + VW ALL C
Sbjct: 487 GQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGAC 546
Query: 457 HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPG 516
+ +IG+++ K++L+L + G++ L+SN ++ Q+W+++ + K + ++G+KK
Sbjct: 547 RTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRA 606
Query: 517 YSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
S +E++G + F+++DK H I +L +L
Sbjct: 607 ISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQL 639
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 213/459 (46%), Gaps = 47/459 (10%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+++E P T + C+SL LK + + + G V +++ V+
Sbjct: 27 ILQELKSPTHQTLHYLIDQCISLKQLK---HVHAQIILHGLATQVLTLGKLVSSSVQLRD 83
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ A F+++ + + ++ +I G + P +++ Y+RM +GI ++ + +++A
Sbjct: 84 LRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKA 143
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA G+ VH S + + VQ +++++Y G + A VF ++S +V+W
Sbjct: 144 CAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSW 203
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TV 305
++I+G+++ G + + + EMQ G EPD +LV L + G LG+ +H + V
Sbjct: 204 NSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVV 263
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG-------- 357
+ + ++ +++DMY+KCG CA+++FDQM +D++SW +I +Y HG
Sbjct: 264 TGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEF 323
Query: 358 ------------------HGE-----EALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
H + EA+ LF +M ++ V + +T ++LS+ SH G +
Sbjct: 324 FNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDL 383
Query: 395 EEGR----YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G+ Y FD I + ++D+ A+ G ++ A+ + M E W
Sbjct: 384 ALGKQAHSYIFD-----NNITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWN 437
Query: 451 ALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
++ H + K +I + + PD++ L+S
Sbjct: 438 VIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLS 476
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 291/535 (54%), Gaps = 35/535 (6%)
Query: 61 LGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L LY +++ RPD TF LKAC L + G+ + LG +DVFV ++ +
Sbjct: 109 LPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATH 168
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG--IDADE 177
G M +A F++ +DLV W+++I G V G P EA++ + RM E + DE
Sbjct: 169 FLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDE 228
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V M+ + C + D G +HG+ ++ V++ +L+DMY K G L++A VF+
Sbjct: 229 VTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFER 288
Query: 238 MSRINIVTWGALISGFAQNGL-------------------------------AGSTLELL 266
+ +V+W +I GFA+ GL L L
Sbjct: 289 IEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLF 348
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EMQ PD +++V+ L AC+Q+G L++G +H Y + R F++ LGTS+IDMY+KC
Sbjct: 349 HEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKC 408
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +F ++ ++ ++W +I HGH EA+ F MIE KPD TF +L
Sbjct: 409 GNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVL 468
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA H+GLV+EGR +F LM +KY ++ KHY+CM+DLL RAG ++EA ++V++M EP
Sbjct: 469 SACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPD 528
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
VW A+ C S+GEK A K+++++P D GI+ L++N +A ++ VR
Sbjct: 529 AVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAM 588
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWL 560
MR G++KVPG S +E+NG +H FI++DKSH I L ++ L+++ + L
Sbjct: 589 MRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIKHTADLL 643
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 202/415 (48%), Gaps = 47/415 (11%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N+ +++ G D AR+LF+ P+R + ++N++I Y R+ +P E L L+ +M+ E
Sbjct: 164 NAATHFLSIRGPMED---ARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAE 220
Query: 71 D--VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
D VRPD T A+ C + DL++G + G V + ++++++Y+KCG +
Sbjct: 221 DAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLE 280
Query: 129 EAMVAFEKMQRKDLVCWSSMINGL-----------VFNGQP------------------- 158
A FE+++ + +V W++MI G VF+ P
Sbjct: 281 MAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQ 340
Query: 159 -REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
+EA+ + M++ + DE+ M+ L+ AC+ LG G+ VH Y + L V + TS
Sbjct: 341 CKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTS 400
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMYAK G+++ A H+FK + N +TW A+I G A +G A +E M G +PD
Sbjct: 401 LIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPD 460
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALF 335
++ + L AC G +K G+ ++ + + +ID+ + G A L
Sbjct: 461 EITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 520
Query: 336 DQMQ-SRDLISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLS 386
+ M D + W I + + G+ GE+A ++++E + P S LL+
Sbjct: 521 NTMPMEPDAVVWGAIFFACRMQGNISLGEKAA---MKLVE--IDPSDSGIYVLLA 570
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/518 (34%), Positives = 287/518 (55%), Gaps = 10/518 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMI-----KEDVRPDSSTFTVALKACVSLMD-L 92
R +N++I + + P + ++ RPD T ALKAC L L
Sbjct: 75 RCAHPFNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGL 134
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
+ G + A + G+ V V ++++ Y CG+ +A F++M +D+V W+++++
Sbjct: 135 REGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAF 194
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
G EA+ M + +EV + ++ AC +LG +R G +VHG+ RR L++
Sbjct: 195 TRGGMFMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNL 251
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
V +L+DMY K LDLA VF + +IV+W +ISG Q LE+ MQ
Sbjct: 252 IVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQIS 311
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCA 331
G +PD V L + L ACA +G L+ G+ +H Y R+ ++++ +GTSV+DMY KCG A
Sbjct: 312 GVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTA 371
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
++F +M +++ SWN +I + +HG G EAL F +M+ + + P+ TF ++L A HS
Sbjct: 372 VSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHS 431
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
GLV+EGR F+LM YK+ P E HY CMVDLL RAG ++EA ++ +M PG+ WV
Sbjct: 432 GLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVT 491
Query: 452 LLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM 511
LLS C H + +++ + +L GI+ L+SN +A+ +W +V R M + GM
Sbjct: 492 LLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGM 551
Query: 512 KKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+K PG SV+EVNG+ F++ ++H +D+ +L L
Sbjct: 552 QKEPGSSVIEVNGKTCEFLVGQQNHLYMDDVRAMLSIL 589
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 186/349 (53%), Gaps = 14/349 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ YG ARK+F+E+ R V ++ +++ A++R E LG+ +M DV P+
Sbjct: 159 LVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM---DVTPN 215
Query: 76 SSTFTVALKACVSLMDLKMGEEI----WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
T L AC +L + G+ + +R+ EL ++ VG+++L++YVKC K++ A
Sbjct: 216 EVTLASVLVACGNLGTARAGKAVHGWYFRREKEL----NLIVGNALLDMYVKCEKLDLAR 271
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + +D+V W+ MI+GLV +P EA++ + M+ G+ D+VV+ ++ ACA LG
Sbjct: 272 RVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLG 331
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G VH Y R+ + DV V TS+VDMY K G LD A +F+ M N+ +W ALI+
Sbjct: 332 ALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALIN 391
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
GFA +G L+ M + G P+ V+ ++ L AC G ++ G+ + + + +
Sbjct: 392 GFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLS 451
Query: 312 LVLG--TSVIDMYSKCGVPSCARALFDQMQSRD-LISWNVIIASYGIHG 357
++D+ + G+ A + M R + +W ++++ HG
Sbjct: 452 PWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHG 500
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 23/259 (8%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR++F+ L R + ++ +I + + P E L ++N M V+PD + L AC S
Sbjct: 270 ARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACAS 329
Query: 89 LMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
L L+ G E I RK +E DV VG+S++++YVKCG ++ A+ F++M K++
Sbjct: 330 LGALESGRWVHEYIERKGIEW----DVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSS 385
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++ING +G+ REA+D + RM G+ +EV + ++ AC GL G +
Sbjct: 386 WNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACC-----HSGLVQEGRQL 440
Query: 205 RRHLNLDVKVQT------SLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQNG 257
+ K+ +VD+ + G + A V K M R + TW L+S +G
Sbjct: 441 FELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHG 500
Query: 258 LAGSTLELLM---EMQSCG 273
+ ++LM E++S G
Sbjct: 501 RMDFSQQILMHIHELESSG 519
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
+A +F+E+PL+ V ++N++I ++ E L +++M+ + P+ TF L AC
Sbjct: 370 TAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACC 429
Query: 88 SLMDLKMGEEIWR---KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ-RKDLV 143
++ G +++ K+ +L D + M++L + G + EA + M R +
Sbjct: 430 HSGLVQEGRQLFELMTKSYKLSPWEDHY--GCMVDLLGRAGLIQEAYDVIKAMPMRPGVF 487
Query: 144 CWSSMINGLVFNGQ 157
W ++++ +G+
Sbjct: 488 TWVTLLSACQAHGR 501
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 324/558 (58%), Gaps = 12/558 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGK--NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+KT + + R++ALY ND+ AR +F+ + R + +N+II Y + +
Sbjct: 37 LKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHD 96
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ L+++++ E + PD+ T +K C L ++ G++I A+++G+G+DVFV S++N
Sbjct: 97 GIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVN 155
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG+++ A F+ M KD+V W+S+I+G G+ A+ ++ M + + V+
Sbjct: 156 MYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVL 215
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ GL C + +R + R+L ++++ Y K+G D A +F M
Sbjct: 216 VDGL-SKCGKVESAR---KLFDQMPCRNL----VSWNAMINGYMKSGDFDSALELFYQMP 267
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++VTW +I+G+ NG +++ M G P +LVS L A + + L G+
Sbjct: 268 IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRW 327
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH Y + F+ + +LGTS+I+MY+KCG A +F +Q + + W II GIHG
Sbjct: 328 IHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGM 387
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
AL+LFL+M +T +KP+ F +L+A +H+GLV++GR +FD+M+++YKI+PT +HY
Sbjct: 388 ANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYG 447
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
C+VD+L RAG +EEA +++M P +W++LL G NH K IGE A++V+++ P+
Sbjct: 448 CLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPE 507
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+G + L+SN +A WE+V+ VR+ M K G +K PG S VE G LH FI+ D SH Q
Sbjct: 508 TIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQ 567
Query: 539 YEDIVYVLKKLYLEMRAI 556
++I + ++ +++ +
Sbjct: 568 TKEIYAKMSEMKEKLKCV 585
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 302/555 (54%), Gaps = 34/555 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y + + AR +F+ + V +N +I +Y E L ++ M+ P
Sbjct: 76 KLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNP 135
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF LKAC L +L++G ++ V++G ++F+G++++ +Y KCG + EA
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +D+V W+SM+ G +GQ +A++ K M ++ D M L
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL----------- 244
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
S V Y ++ ++F+ M++ N+++W +I+ +
Sbjct: 245 ----------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYV 282
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N + + L ++M+ CG +PD+V++ S L AC + L LG+ +H Y + NL+
Sbjct: 283 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLL 342
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L +++DMY+KCG AR +FD+M+ RD++SW ++++YG G G +A++LF +M+++
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD F S+LSA SH+GL+++GR++F +M +Y I P +H+ACMVDL RAGEVEEA
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M EP VW ALLS C H K IG A + +L P G + L+SN +A
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKA 522
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
W++V VR M+K G+KKVPG S VE+NG++H F+ D+ H Q ++I L L +M
Sbjct: 523 GMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKM 582
Query: 554 RAISSWLQGHMEEHE 568
+ + Q H+
Sbjct: 583 KELGYIPQTESALHD 597
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 34/346 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D + ++ Y G+ + A F++ K++V ++ MI V N EA+ ++ M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ D +++AC+ L + R GL VH ++ L+ ++ + +LV MY K G L
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A V M ++V+W ++++G+AQ+G LE+ EM S D+ ++ S
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS------ 243
Query: 290 QIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
S + Y+ +F++M ++LISWNV+
Sbjct: 244 --------------------------LSPVVCYTSLENVQYIHNMFERMTKKNLISWNVM 277
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA Y + EA+SLFLQM E +KPD T ASLL A + GR + K
Sbjct: 278 IAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKY-IEKGN 336
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+QP ++D+ A+ G +EEA + D M + W +++S
Sbjct: 337 LQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMSA 381
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 14/312 (4%)
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
I HL +D + L+ Y+ G +A ++F N+V + +I + N L L
Sbjct: 63 INEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEAL 122
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
+ M SC F PD + L AC+ + L++G +H V+ D NL +G +++ MY
Sbjct: 123 SIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMY 182
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
KCG AR + DQM RD++SWN ++A Y G ++AL + +M + D T A
Sbjct: 183 GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA 242
Query: 383 SLLSALSHSGL--VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
SL + ++ L V+ F+ M K I + M+ + EA+ + M
Sbjct: 243 SLSPVVCYTSLENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQM 297
Query: 441 S---TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSNFFAMEQK 495
+P +LL C + +G ++ K + K L P+ L +AL+ + +A
Sbjct: 298 EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALL-DMYAKCGC 356
Query: 496 WEEVAGVRKTMR 507
EE V MR
Sbjct: 357 LEEARDVFDKMR 368
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 318/562 (56%), Gaps = 32/562 (5%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D AR+LF+E+P + +N++I YSR + P + LY +M++ V+PD TF K
Sbjct: 88 DFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 147
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+ L+ G ++ ++ G +VFV ++++ +Y+ CG+++ A F+ + D++
Sbjct: 148 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVIT 207
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ +I+ G+ E+ + M+ + + V ++ ++ AC+ L D R G VH Y
Sbjct: 208 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 267
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG------- 257
+ ++ ++ +++DMYA G +D A +F++M+ +I++W ++SGF G
Sbjct: 268 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 327
Query: 258 ----------------LAG--------STLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
+ G LEL MQ+ +PD ++VS L ACA +G
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387
Query: 294 LKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+LG+ I Y R + +L + ++IDMY KCG A ++F +M RD +W +I
Sbjct: 388 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 447
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
++GHGE+AL +F M++ + PD T+ +LSA +H+GLV++GR +F M S++ I+P
Sbjct: 448 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEP 507
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
HY C+VDLLARAG ++EA +++++M + VW ALL+GC +++ + E V K++
Sbjct: 508 NIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 567
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
L+L PD+ ++ L+ N +A ++W ++ +R+ M G+KK PG S++E+NG +H F+
Sbjct: 568 LELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAG 627
Query: 533 DKSHNQYEDIVYVLKKLYLEMR 554
D+SH Q ++I L K+ +++
Sbjct: 628 DRSHPQTKNIDAKLDKMTQDLK 649
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 8/282 (2%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA--KTGHLDLASHVFKN 237
++ L++ C + + VH +I++ LN + +Q ++ + G A +F
Sbjct: 42 LISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 98
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ N+ W +I G+++ + L +EM G +PD + + L+ G
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 158
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +HG+ ++ +N+ + T+++ MY CG AR +FD D+I+WN+II++Y
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 218
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G EE+ LFL M + V P T +LSA S + G+ V K++
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY-VKNCKVESNLVL 277
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
M+D+ A GE++ AL I SM+ ++ W ++SG N
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNNRDIIS-WTTIVSGFTN 318
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 318/562 (56%), Gaps = 32/562 (5%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D AR+LF+E+P + +N++I YSR + P + LY +M++ V+PD TF K
Sbjct: 67 DFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 126
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+ L+ G ++ ++ G +VFV ++++ +Y+ CG+++ A F+ + D++
Sbjct: 127 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVIT 186
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ +I+ G+ E+ + M+ + + V ++ ++ AC+ L D R G VH Y
Sbjct: 187 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 246
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG------- 257
+ ++ ++ +++DMYA G +D A +F++M+ +I++W ++SGF G
Sbjct: 247 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 306
Query: 258 ----------------LAG--------STLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
+ G LEL MQ+ +PD ++VS L ACA +G
Sbjct: 307 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366
Query: 294 LKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+LG+ I Y R + +L + ++IDMY KCG A ++F +M RD +W +I
Sbjct: 367 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 426
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
++GHGE+AL +F M++ + PD T+ +LSA +H+GLV++GR +F M S++ I+P
Sbjct: 427 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEP 486
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
HY C+VDLLARAG ++EA +++++M + VW ALL+GC +++ + E V K++
Sbjct: 487 NIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 546
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
L+L PD+ ++ L+ N +A ++W ++ +R+ M G+KK PG S++E+NG +H F+
Sbjct: 547 LELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAG 606
Query: 533 DKSHNQYEDIVYVLKKLYLEMR 554
D+SH Q ++I L K+ +++
Sbjct: 607 DRSHPQTKNIDAKLDKMTQDLK 628
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 8/282 (2%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA--KTGHLDLASHVFKN 237
++ L++ C + + VH +I++ LN + +Q ++ + G A +F
Sbjct: 21 LISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 77
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ N+ W +I G+++ + L +EM G +PD + + L+ G
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 137
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +HG+ ++ +N+ + T+++ MY CG AR +FD D+I+WN+II++Y
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 197
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G EE+ LFL M + V P T +LSA S + G+ V K++
Sbjct: 198 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY-VKNCKVESNLVL 256
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
M+D+ A GE++ AL I SM+ ++ W ++SG N
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNNRDIIS-WTTIVSGFTN 297
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 325/553 (58%), Gaps = 9/553 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ + G ++ +Y +D SA ++F + R + ++ ++I Y+R +
Sbjct: 226 IIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQA 285
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ +M++ V P++ T L +C L+ G+ + AV+ +D +G +++
Sbjct: 286 LQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEY 345
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y + GK++ + +++++ W+ +I+ G +EA+ + +M+++G D +
Sbjct: 346 YAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSL 405
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
I ACA++G G +HGY+I+RH+ LD VQ SL+DMY+K GH+DLA +F +
Sbjct: 406 SSSISACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQS 464
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V W ++I GF+Q G + + L +M + + V+ ++A+ AC+ +G L+ GK +
Sbjct: 465 KSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWL 524
Query: 301 H----GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
H Y V++ +L + T++IDMY+KCG A +FD M R ++SW+ +I G+H
Sbjct: 525 HHKLIAYGVKK---DLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMH 581
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G + A+SLF +MI+ +KP+ TF ++LSA SHSG VEEG+++F+ M ++++P +H
Sbjct: 582 GDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEH 640
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+ACMVDLL+RAG+++EA +I++SM ++W ALL+GC H++ + + + +L +
Sbjct: 641 FACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMR 700
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
DD G + L+SN +A E W+ VR M+ G+KKVPGYS +E++ +++ F D SH
Sbjct: 701 TDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSH 760
Query: 537 NQYEDIVYVLKKL 549
Q ++I L+
Sbjct: 761 WQVKEINTFLENF 773
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 250/480 (52%), Gaps = 16/480 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + +A+K+F+ + R + +++SII Y E L ++ ++ +DV D
Sbjct: 140 LLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELD 199
Query: 76 SSTFTVALKACVSLMDLKMGEE----IWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEA 130
S T AC L L++ + I R+ +E G ND V +Y +C + A
Sbjct: 200 SVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVL-----MYSRCDDFSSA 254
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M + + W++MI+ + ++A+ + M + + + V +M ++ +CA
Sbjct: 255 ERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGF 314
Query: 191 GDSRFGLSVHGYSIRRHLNLDV-KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
R G SVH Y+++ H++LD + +L++ YA+ G L V + + NI++W L
Sbjct: 315 NLLREGKSVHCYAVK-HIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNML 373
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
IS +A GL L + ++MQ G PDS SL S++ ACA +G L LG IHGY ++R
Sbjct: 374 ISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHI 433
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ + S+IDMYSKCG A +FD++QS+ +++WN +I + G+ EA+ LF QM
Sbjct: 434 LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQM 493
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ + TF + + A SH G +E+G+ W + Y ++ ++D+ A+ G+
Sbjct: 494 YLNCLDMNEVTFLTAIQACSHMGHLEKGK-WLHHKLIAYGVKKDLFIDTALIDMYAKCGD 552
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ A ++ DSMS E + W A++ GC H + ++++ + P+D+ ++S
Sbjct: 553 LRIAHRVFDSMS-ERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILS 611
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 233/447 (52%), Gaps = 14/447 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF--EVLGLYNQMIKEDV 72
++I Y + S++ +FE + D++ ++ S F E + LYN+MI + +
Sbjct: 38 KLIESYSQIGCLQSSKLVFE--TFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQI 95
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
F+ L+AC +L +GEE+ + ++ G D V +S+L +Y G ++ A
Sbjct: 96 PISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKK 155
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +DLV WSS+I+ V NG+ E ++ ++ + + ++ D V M+ + AC +LG
Sbjct: 156 VFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGF 215
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R SVHG IR+ + + +LV MY++ A +F NM +I +W A+IS
Sbjct: 216 LRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISC 275
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-N 311
+ ++ L++ +EM P++V++++ L +CA L+ GKS+H Y V+ D +
Sbjct: 276 YNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDD 335
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
LG ++I+ Y++ G S + + R++ISWN++I+ Y G +EAL +F+QM
Sbjct: 336 DSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQR 395
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP---TEKHYACMVDLLARAG 428
PD + +S +SA ++ GL+ W + Y I+ E ++D+ ++ G
Sbjct: 396 QGQIPDSFSLSSSISACANVGLL-----WLGHQIHGYAIKRHILDEFVQNSLIDMYSKCG 450
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
V+ A I D + ++ +A W +++ G
Sbjct: 451 HVDLAYLIFDRIQSKSVVA-WNSMICG 476
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 169/317 (53%), Gaps = 4/317 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
++C SL L + + + G +D + ++ Y + G + + + FE Q D
Sbjct: 8 FRSCTSLRPLTL---LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDS 64
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+ +I V++ EA+ Y +M + I + + +++ACA G+ G VHG
Sbjct: 65 FMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGR 124
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
I+ L++D V+TSL+ MY G L A VF NM+ ++V+W ++IS + NG +
Sbjct: 125 IIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEG 184
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDM 321
LE+ + S E DSV+++S AC ++GFL+L KS+HG +R R + L +++ M
Sbjct: 185 LEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLM 244
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YS+C S A +F M +R + SW +I+ Y ++AL +F++M+E V P+ T
Sbjct: 245 YSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTI 304
Query: 382 ASLLSALSHSGLVEEGR 398
++LS+ + L+ EG+
Sbjct: 305 MAVLSSCAGFNLLREGK 321
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 301/537 (56%), Gaps = 1/537 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y +++ A KLF LP + +YN++II Y+R E F+ L+ Q+ K D +
Sbjct: 302 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 361
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+ AL A + G ++ A++ +++ V +++L++Y KCG + EA F++M+
Sbjct: 362 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 421
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D V W+++I N + + + M + ++ DE +++ACA G+
Sbjct: 422 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 481
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VHG I+ + L + V ++LVDMY+K G ++ A + + +V+W A+ISGF+
Sbjct: 482 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 541
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
+ + M G EPD+ + + L CA + + LGK IH ++ ++ + ++
Sbjct: 542 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 601
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMYSKCG + +F + RD ++WN +I + HG GEEAL LF M+ +KP+
Sbjct: 602 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 661
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
H+TF S+L A SH G ++G ++F M S Y ++P +HY+CMVD+L R+G+VEEAL+++
Sbjct: 662 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 721
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
M E +W LLS C + EK A +LKL+P+D + L+SN +A W+
Sbjct: 722 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 781
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+V+ +R+TMR +KK PG S +EV E+H F++ DK+H + E I +L L +MR
Sbjct: 782 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMR 838
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 238/461 (51%), Gaps = 16/461 (3%)
Query: 29 ARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
A+ +F +P G V ++NS+I Y + + + ++ +M V D +T V+LK C
Sbjct: 109 AQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICS 168
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L D +G +I AV++G+ DV GS+++++Y KC + +++ F ++ K+ + WS+
Sbjct: 169 LLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSA 228
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I G V N Q + +K M+++GI + + ++CA L SR G +H ++++
Sbjct: 229 AIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTD 288
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
DV V T+ +DMYAK ++ A +F + N+ ++ A+I G+A+N +L +
Sbjct: 289 FGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFL 348
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
++Q F D VSL AL A A I G +HG ++ N+ + +++DMY KCG
Sbjct: 349 QLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCG 408
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
A LFD+M+ RD +SWN II + + + LS F M+ + ++PD T+ S+L
Sbjct: 409 ALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLK 468
Query: 387 ALS-----HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
A + +G+ GR M K + + +VD+ ++ G +EEA KI +
Sbjct: 469 ACAGQRAFSNGMEVHGRIIKSGMGLKMFVG------SALVDMYSKCGMMEEAEKIHYRLE 522
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDL 480
E + W A++SG KK ++ +L++ PD+
Sbjct: 523 -EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 226/445 (50%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N + + +F ELP + ++++ I + + L L+ +M ++ +
Sbjct: 198 LVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVS 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST+ ++C L ++G ++ A++ +G+DV VG++ L++Y KC M++A F
Sbjct: 258 QSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFS 317
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +L +++MI G N Q +A + +++K DEV + G + A A +
Sbjct: 318 LLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE 377
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL +HG +I+ +L+ ++ V +++DMY K G L AS +F M + V+W A+I+ Q
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ 437
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N G TL M EPD + S L ACA G +HG ++ + +
Sbjct: 438 NESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFV 497
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMYSKCG+ A + +++ + ++SWN II+ + + E++ F M+E V
Sbjct: 498 GSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGV 557
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD+ T+A++L ++ V G+ M+ K ++ + +VD+ ++ G + ++L
Sbjct: 558 EPDNFTYATVLDTCANLATVGLGKQIHAQMI-KLELLSDVYITSTLVDMYSKCGNMHDSL 616
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
+ + W A++ G H
Sbjct: 617 LMFRKAPKRDSV-TWNAMICGFAYH 640
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 198/393 (50%), Gaps = 11/393 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK+NLS+ I+ +YG +V A LF+E+ +R ++N+II A + ES + L
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ M++ + PD T+ LKAC G E+ + ++ G G +FVGS+++++Y
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMY 505
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M EA +++ + +V W+++I+G + ++ + M + G++ D
Sbjct: 506 SKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYA 565
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ CA+L G +H I+ L DV + ++LVDMY+K G++ + +F+ +
Sbjct: 566 TVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKR 625
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ VTW A+I GFA +GL LEL M +P+ + VS L AC+ +G K G
Sbjct: 626 DSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYF 685
Query: 302 G--YTVRRFDFNLVLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
++ + L + ++D+ + G V R + D D I W +++ I G+
Sbjct: 686 QKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGN 745
Query: 359 ---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
E+A S L++ P+ S+ +LLS +
Sbjct: 746 VEVAEKAASSLLKL-----DPEDSSAYTLLSNI 773
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 194/416 (46%), Gaps = 35/416 (8%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF+ + C + LK G+E + G+ VFV + ++ +YVKC + A FE+M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 138 QRKDLVCWSSMINGL-----------VFNGQP---------------------REAVDAY 165
++D+V W++M+ G VFN P ++++ +
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+M+ G+ D + ++ C+ L D G+ +HG +++ + DV ++LVDMYAK
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
L+ + VF + N ++W A I+G QN L+L EMQ G + S
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
+CA + +LG +H + ++ F ++++GT+ +DMY+KC S A LF + +L
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
S+N +I Y + G +A LFLQ+ + D + + LSA + EG L
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
+ K + ++D+ + G + EA + D M ++ W A+++ C ++
Sbjct: 386 I-KSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS-WNAIITACEQNE 439
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK L + ++ +Y ++ + +F + P R T+N++I ++ E
Sbjct: 587 MIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEA 646
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLN 119
L L+ M+ E+++P+ +TF L+AC + + K G ++K + + S M++
Sbjct: 647 LELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVD 706
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
+ + G++ EA+ + M D + W ++++ G A A + K
Sbjct: 707 ILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLK 758
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 314/551 (56%), Gaps = 3/551 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK + S ++ +Y + A +F+E+ + ++N+II E
Sbjct: 137 LIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRA 196
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L +M K + P+ T + ALKAC + ++G ++ +++ G+D F+G ++++
Sbjct: 197 LELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDM 256
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC M++A + F+ M +D++ W+++I+G N + EA + M EGI ++ +
Sbjct: 257 YSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTL 316
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++++ A L + +H S++ D V SL+D Y K GH++ A+ VF+
Sbjct: 317 STVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI 376
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++V + +L++ +AQ+G L L +EMQ G +PDS S L ACA + + GK +
Sbjct: 377 VDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQV 436
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H + + +F F ++ G S+++MY+KCG A F ++ R ++SW+ +I HG+
Sbjct: 437 HVH-ILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGY 495
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+EAL LF QM++ V P+H T S+L A +H+GLV E +++F+ M + I+P ++HYA
Sbjct: 496 GKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYA 555
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CM+DLL RAG++E A+++V+ M + VW ALL HK +GE+ A+ +L L P+
Sbjct: 556 CMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPE 615
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
G H L++N +A W++VA VR+ M+ +KK PG S +EV +++ FI+ D+SH++
Sbjct: 616 KSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSR 675
Query: 539 YEDIVYVLKKL 549
+I L +L
Sbjct: 676 STEIYAKLDEL 686
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 238/469 (50%), Gaps = 10/469 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
NS+ + A GG D AR LF+ +P R V ++N++ Y + E + L++ M+
Sbjct: 48 ANSLVILYAKCGGFGD---ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVL 104
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RP+ + + + C L D G +I ++LGY +D F ++++++Y K G + +
Sbjct: 105 SGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILED 164
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+++ + D+V W+++I G V + A++ + M K G+ + + ++ACA
Sbjct: 165 ASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAG 224
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ G +H I+ + D + L+DMY+K +D A VFK M +++ W A+
Sbjct: 225 MALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAV 284
Query: 250 ISGFAQN--GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
ISG +QN ++L LM + GF ++S V +A Q + + + IH +++
Sbjct: 285 ISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANY--MCRQIHALSLKS 342
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F+F+ + S+ID Y KCG A +F++ DL+ + ++ +Y G GEEAL L+
Sbjct: 343 GFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLY 402
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
L+M + +KPD +SLL+A + E+G+ + + K+ +V++ A+
Sbjct: 403 LEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQ-VHVHILKFGFMSDIFAGNSLVNMYAK 461
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
G +E+A + G+ W A++ G H ++ K++LK+
Sbjct: 462 CGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQHGYGKEALQLFKQMLKV 509
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 216/438 (49%), Gaps = 34/438 (7%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
++ + F LKAC DL +G+++ V G+ +D FV +S++ LY KCG +A
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + + +V W+++ + V + EAV + M GI +E + +I C L
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
DS G +HGY I+ + D +LVDMYAK G L+ AS VF +++ +IV+W A+I+
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA 185
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G + LELL EM G P+ +L SAL ACA + +LG+ +H ++
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGS 245
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ LG +IDMYSKC AR +F M RD+I+WN +I+ + + EEA SLF M
Sbjct: 246 DSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMH 305
Query: 371 ETMVKPDHSTFASLLS---------------ALSHSGLVEEGRYWFDLMVSKY----KIQ 411
+ + +T +++L ALS E Y + ++ Y ++
Sbjct: 306 TEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVE 365
Query: 412 PTEKHY--ACMVDLL---------ARAGEVEEALKIVDSMS---TEPGLAVWVALLSGCH 457
+ + + +VDL+ A+ G+ EEAL++ M +P V +LL+ C
Sbjct: 366 DATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACA 425
Query: 458 NHKKFSIGEKVAKKVLKL 475
+ + G++V +LK
Sbjct: 426 SLSAYEQGKQVHVHILKF 443
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 3/285 (1%)
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
GI +E +++AC D G VHG + + D V SLV +YAK G A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
+F + ++V+W AL S + + + G + L +M G P+ SL S + C +
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
G+ IHGY ++ +D + +++DMY+K G+ A ++FD++ D++SWN II
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A +H + AL L +M ++ + P+ T +S L A + L E GR ++ K +
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI-KMDM 243
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ ++ +++A ++V + E + W A++SG
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDA-RLVFKLMPERDMIAWNAVISG 287
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLVLGTSVIDMYSKCGV 327
M G + + + S L AC L LGK +HG V FD + + S++ +Y+KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHG--HGEEALSLFLQMIETMVKPDHSTFASLL 385
AR+LFD + R ++SWN + + Y +H HG EA+SLF M+ + ++P+ + +S++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCY-VHSDMHG-EAVSLFHDMVLSGIRPNEFSLSSMI 118
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ + +GR ++ K +VD+ A+ G +E+A + D ++ +P
Sbjct: 119 NVCTGLEDSVQGRKIHGYLI-KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPD 176
Query: 446 LAVWVALLSGCHNHK 460
+ W A+++GC H+
Sbjct: 177 IVSWNAIIAGCVLHE 191
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 289/505 (57%), Gaps = 5/505 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NS+I Y E P + +Y +M+++ PD TF V LKAC + + G ++ V
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+LG D +V +S++ Y CG + A F++M +D+V W+S+I+G + G EA+
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ RM ++ ++ ++ ACA GD G +HG I R +++ + +++DMY
Sbjct: 193 VFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGV-IERRFKVNLVLGNAMLDMYV 248
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G A ++F + +IV+W +I+G Q+ +LEL M++ G PD++ L S
Sbjct: 249 KNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTS 308
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L ACA +G L G +H Y +R +++ +GT+++DMY+KCG A +F M R+
Sbjct: 309 VLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRN 368
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+WN ++ +HG EAL+LF MI + VKP+ TF ++L+A H GLV+EGR +FD
Sbjct: 369 TFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFD 428
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M Y + P +HY CM+DL RAG +EEA+++ +M +P + +W LL+ C
Sbjct: 429 NMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNI 488
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ ++ +L+L+ DD G+ L+SN A+ Q+W V +R+ M+ G++K PG SV+EV
Sbjct: 489 ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEV 548
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLK 547
+G+ H F++ D SH Q E+I VL
Sbjct: 549 DGKAHEFVVGDISHLQTEEIYKVLN 573
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 198/377 (52%), Gaps = 9/377 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I YG D A K+F+E+ +R V ++NS+I + + E + ++ +M DV P
Sbjct: 146 LIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRM---DVEPS 202
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L AC DL G+ I +E + ++ +G++ML++YVK G EA F+
Sbjct: 203 MTTLVSVLAACARNGDLCTGKGI-HGVIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFD 261
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ +D+V W+ MI GLV + P+++++ + M+ GI D +++ ++ ACA LG F
Sbjct: 262 ELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDF 321
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y +R + D+ + T++VDMYAK G +++A +F +MS+ N TW AL+ G A
Sbjct: 322 GTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAM 381
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLV 313
+GL L L M G +P+ ++ ++ L AC G + G+ + ++ L
Sbjct: 382 HGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLE 441
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ID++ + G+ A L M + D++ W +++ + G+ E LS +Q
Sbjct: 442 HYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIE--LSHRIQDYIL 499
Query: 373 MVKPDHSTFASLLSALS 389
+ D S LLS +S
Sbjct: 500 ELDHDDSGVFVLLSNIS 516
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 129/258 (50%), Gaps = 8/258 (3%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K NL GN+ ++ +Y A+ +F+ELP R + ++ +I + + P + L
Sbjct: 234 KVNL-VLGNA---MLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLE 289
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L++ M + PD+ T L AC SL L G + + G D+ +G++++++Y
Sbjct: 290 LFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYA 349
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG + A+ F M +++ W++++ GL +G EA++ ++ M G+ +E+ +
Sbjct: 350 KCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLA 409
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS- 239
++ AC G G ++ + NL K++ ++D++ + G L+ A + + M
Sbjct: 410 ILTACCHCGLVDEGRKYFD-NMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPM 468
Query: 240 RINIVTWGALISGFAQNG 257
+ +++ WG L++ G
Sbjct: 469 KPDVLIWGLLLNACTTVG 486
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 153/314 (48%), Gaps = 14/314 (4%)
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK-TGHLDLAS-HVFK 236
V++ I+ C +L R +H + L D V + +++ +A + D A ++ +
Sbjct: 7 VLLDSIKDCKNL---RIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQ 63
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+R+ + +LI+G+ + + M GF PD + L AC+ +
Sbjct: 64 GNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 123
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ +HG V+ + + S+I Y CG SCA +FD+M RD++SWN +I+ +
Sbjct: 124 GRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMK 183
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
GH +EA+S+F +M V+P +T S+L+A + +G + G+ ++ ++K+
Sbjct: 184 AGHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVL 473
+ M+D+ + G EA I D + T + W +++G +H K S+ + L
Sbjct: 241 N--AMLDMYVKNGCFYEAKNIFDELPTRD-IVSWTIMITGLVQSDHPKQSLELFSMMRTL 297
Query: 474 KLNPDDLGIHALVS 487
++PD + + +++S
Sbjct: 298 GISPDAIILTSVLS 311
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 302/555 (54%), Gaps = 34/555 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y + + AR +F+ + V +N +I +Y E L ++ M+ P
Sbjct: 76 KLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNP 135
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF LKAC L +L++G ++ V++G ++F+G++++ +Y KCG + EA
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +D+V W+SM+ G +GQ +A++ K M ++ D M L
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL----------- 244
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
S V Y ++ ++F+ M++ N+++W +I+ +
Sbjct: 245 ----------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYV 282
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N + + L ++M+ CG +PD+V++ S L AC + L LG+ +H Y + NL+
Sbjct: 283 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLL 342
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L +++DMY+KCG AR +FD+M+ RD++SW ++++YG G G +A++LF +M+++
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD F S+LSA SH+GL+++GR++F +M +Y I P +H+ACMVDL RAGEVEEA
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M EP VW ALLS C H K IG A + +L P G + L+SN +A
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKA 522
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
W++V VR M+K G+KKVPG S VE+NG++H F+ D+ H Q ++I L L +M
Sbjct: 523 GMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKM 582
Query: 554 RAISSWLQGHMEEHE 568
+ + Q H+
Sbjct: 583 KELGYIPQTESALHD 597
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 157/346 (45%), Gaps = 34/346 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D + ++ Y G+ + A F++ K++V ++ MI V N EA+ ++ M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ D +++AC+ L + R GL VH ++ L+ ++ + +LV MY K G L
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A V M ++V+W ++++G+AQ+G LE+ EM S D+ ++ S
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS------ 243
Query: 290 QIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
S + Y+ +F++M ++LISWNV+
Sbjct: 244 --------------------------LSPVVCYTSLENVQYIHNMFERMTKKNLISWNVM 277
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA Y + EA+SLFLQM E +KPD T ASLL A + GR + K
Sbjct: 278 IAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKY-IEKGN 336
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++P ++D+ A+ G +EEA + D M + W +++S
Sbjct: 337 LRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMSA 381
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 14/312 (4%)
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
I HL +D + L+ Y+ G +A ++F N+V + +I + N L L
Sbjct: 63 INEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEAL 122
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
+ M SC F PD + L AC+ + L++G +H V+ D NL +G +++ MY
Sbjct: 123 SIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMY 182
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
KCG AR + DQM RD++SWN ++A Y G ++AL + +M + D T A
Sbjct: 183 GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA 242
Query: 383 SLLSALSHSGL--VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
SL + ++ L V+ F+ M K I + M+ + EA+ + M
Sbjct: 243 SLSPVVCYTSLENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQM 297
Query: 441 S---TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSNFFAMEQK 495
+P +LL C + +G ++ K + K L P+ L +AL+ + +A
Sbjct: 298 EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALL-DMYAKCGC 356
Query: 496 WEEVAGVRKTMR 507
EE V MR
Sbjct: 357 LEEARDVFDKMR 368
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 320/577 (55%), Gaps = 8/577 (1%)
Query: 8 AYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
AY + +G + +Y + A K+F LP +YN+II+ Y+R++ + L ++
Sbjct: 271 AYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQS 330
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ + ++ D + + AL AC + G ++ AV+ G G ++ V +++L++Y KCG
Sbjct: 331 LQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGA 390
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ EA + FE+M+R+D V W+++I N + + + + M + ++ D+ +++A
Sbjct: 391 LMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA +G +HG I+ + LD V ++LVDMY K G L A + + V+W
Sbjct: 451 CAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSW 510
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++ISGF+ + + +M G PD+ + + L CA + ++LGK IH ++
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILK 570
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ ++ + ++++DMYSKCG +R +F++ RD ++W+ +I +Y HG GE+A++L
Sbjct: 571 LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINL 630
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M VKP+H+ F S+L A +H G V++G ++F M+S Y + P +HY+CMVDLL
Sbjct: 631 FEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLG 690
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
R+G+V EALK+++SM E +W LLS C + EK +L+L+P D + L
Sbjct: 691 RSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVL 750
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
++N +A+ W EVA +R M+ +KK PG S +EV E+H F++ DK+H + E+I
Sbjct: 751 LANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQ 810
Query: 546 LKKLYLEMR------AISSWLQGHMEEHEEHDPLSTA 576
L EM+ I L MEE + ++ L T
Sbjct: 811 THLLVDEMKWAGYVPDIDFMLDEEMEEQDPYEGLKTT 847
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 247/482 (51%), Gaps = 27/482 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y G ++ A+ LF+ +P R V ++NS++ Y + + ++ +M
Sbjct: 74 SWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLK 133
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ D +TF V LKAC + D +G ++ A+++G+ NDV GS+++++Y KC K+++A
Sbjct: 134 IPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAF 193
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F +M ++LVCWS++I G V N + E + +K M K G+ + + ++CA L
Sbjct: 194 RVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLS 253
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G +HG++++ D + T+ +DMYAK + A VF + ++ A+I
Sbjct: 254 AFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIV 313
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G+A+ L++ +Q D +SL AL AC+ I G +HG V+ F
Sbjct: 314 GYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGF 373
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+ + +++DMY KCG A +F++M+ RD +SWN IIA++ + + LSLF+ M+
Sbjct: 374 NICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 371 ETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ ++PD T+ S++ A + H +++ G D V +
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGM-GLDWFVG-----------SA 481
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--P 477
+VD+ + G + EA KI + E W +++SG + K+ ++ ++L++ P
Sbjct: 482 LVDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540
Query: 478 DD 479
D+
Sbjct: 541 DN 542
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 230/455 (50%), Gaps = 10/455 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A ++F E+P R + ++++I Y + + E L L+ M+K +
Sbjct: 179 LVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST+ ++C L K+G ++ A++ + D +G++ L++Y KC +M +A F
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFN 298
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++++I G Q +A+D ++ +++ + DE+ + G + AC+ +
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE 358
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +HG +++ L ++ V +++DMY K G L A +F+ M R + V+W A+I+ Q
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQ 418
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N TL L + M EPD + S + ACA L G IHG ++ + +
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY KCG+ A + +++ + +SWN II+ + E A F QM+E +
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGI 538
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEE 432
PD+ T+A++L ++ +E G+ + K+Q Y + +VD+ ++ G +++
Sbjct: 539 IPDNYTYATVLDVCANMATIELGK---QIHAQILKLQLHSDVYIASTLVDMYSKCGNMQD 595
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ +++ + + W A++ H +GEK
Sbjct: 596 S-RLMFEKAPKRDYVTWSAMICAYAYH---GLGEK 626
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 231/510 (45%), Gaps = 59/510 (11%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF+ L+ C +L L G+++ + + G+ ++V + +L Y K KMN A F++M
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 138 QRKDLVCWSSMING-------------------------------LVFNGQPREAVDAYK 166
++D++ W+++I G + NG R++++ +
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
RM+ I D +++AC+ + D GL VH +I+ DV ++LVDMY+K
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
LD A VF+ M N+V W A+I+G+ QN L+L +M G + S
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+CA + KLG +HG+ ++ F ++ ++GT+ +DMY+KC A +F+ + + S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS----------HSGLVE 395
+N II Y G +AL +F + + D + + L+A S GL
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ F++ V+ ++D+ + G + EA I + M ++ W A+++
Sbjct: 368 KCGLGFNICVAN-----------TILDMYGKCGALMEACLIFEEMERRDAVS-WNAIIAA 415
Query: 456 CHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-- 511
+++ + +L+ + PDD ++V A +Q + + KSGM
Sbjct: 416 HEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA-CAGQQALNYGTEIHGRIIKSGMGL 474
Query: 512 KKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
G ++V++ G+ + +K H + E+
Sbjct: 475 DWFVGSALVDMYGKCGMLMEAEKIHARLEE 504
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 308/579 (53%), Gaps = 37/579 (6%)
Query: 1 MIKTNLSAYGNSVGRIIA---LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ R++ L + + A +FE + + +N++ ++ P
Sbjct: 25 MIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ LY MI + P+S TF LK+C L K G++I ++LGY D++V +S+
Sbjct: 85 VSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSL 144
Query: 118 LNLYVKCGK-------------------------------MNEAMVAFEKMQRKDLVCWS 146
+++YVK G+ + A F+++ KD+V W+
Sbjct: 145 ISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWN 204
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++I+G G +EA+D +K M K + DE M+ ++ ACA G + G VH +
Sbjct: 205 AIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDH 264
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
L ++K+ +L+D+Y+K G ++ A +F+ +S ++++W +I G+ L L L
Sbjct: 265 GLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLF 324
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD---FNLVLGTSVIDMYS 323
EM G P+ V+++S L ACAQ+G + G+ IH Y +R L TS+IDMY+
Sbjct: 325 QEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYA 384
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A +F+ M R L + N +I + +HG A +F +M + ++PD TF
Sbjct: 385 KCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHSG+++ GR F M YKI P +HY CM+DLL G +EA +++++M+ E
Sbjct: 445 LLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTME 504
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C H +GE A+K++K+ P++ G + L+SN +A +W EVA +R
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIR 564
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ GMKKVPG S +E++ +H FI+ DK H + +I
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 306/559 (54%), Gaps = 9/559 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ + S +I++Y I A +F +P + + ++ ++I Y + E
Sbjct: 286 VIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEA 345
Query: 61 LGLYNQMIKEDV-RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L L+ ++++ +P+ F AC SL++L+ G+++ V+ G +VF G S+ +
Sbjct: 346 LYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCD 405
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G + A +AF +++ D+V W+++I NG EA+D +++M G+ D +
Sbjct: 406 MYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSIT 465
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ L+ C G +H Y ++ + ++ V SL+ MY K HL A +VF+++S
Sbjct: 466 YISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDIS 525
Query: 240 R-INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
R N+V+W A++S Q G T L EM G +PDS+++ + L CA++ L +G
Sbjct: 526 RNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGN 585
Query: 299 SIHGYTVRRFDFNLVLGTSV----IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+H Y+++ L+L SV IDMY+KCG AR +FD Q+ D++SW+ +I Y
Sbjct: 586 QVHCYSIKS---GLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYA 642
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
G G EAL+LF M V+P+ T+ LSA SH GLVEEG + M +++ I PT
Sbjct: 643 QCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTR 702
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+H++C+VDLLARAG + EA + + + W LL+ C H I E+ A +LK
Sbjct: 703 EHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILK 762
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
L+P + ++ N A WEEVA +RK M++ G++KVPG S +EV + H F ED
Sbjct: 763 LDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDS 822
Query: 535 SHNQYEDIVYVLKKLYLEM 553
SH Q I +L++L+ ++
Sbjct: 823 SHPQRNLIYTMLEELWSQV 841
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 218/436 (50%), Gaps = 14/436 (3%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACVSL 89
L +ELP NS II ++ E L ++ +K + + ST+T + AC +
Sbjct: 119 NLSKELPT------NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANF 172
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
L ++I ++ Y + + + M+N+Y KCG M +A F+ MQ ++V W+SMI
Sbjct: 173 RSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMI 232
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
+G NGQ +A+ Y +M + G D++ +I+AC GD G +H + I+
Sbjct: 233 SGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFG 292
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
+ Q +L+ MY G ++ AS+VF + ++++WG +I+G+ Q G L L ++
Sbjct: 293 HHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDL 352
Query: 270 QSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
G ++P+ S AC+ + L+ GK +HG V+ N+ G S+ DMY+K G
Sbjct: 353 LRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGF 412
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A+ F Q+++ D++SWN IIA++ +G EA+ F QMI + PD T+ SLL
Sbjct: 413 LPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCT 472
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPG 445
+ +GR +V KI ++ C ++ + + + +AL + +S
Sbjct: 473 CGSPVRLNQGRQIHSYIV---KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNAN 529
Query: 446 LAVWVALLSGCHNHKK 461
L W A+LS C K+
Sbjct: 530 LVSWNAILSACLQKKQ 545
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 13/448 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I +YG + ARK+F+ + L V ++ S+I YS+ + + +Y QM + P
Sbjct: 199 HMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFP 258
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF +KAC D+ +G ++ ++ +G+ + ++++++Y G++ A F
Sbjct: 259 DQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVF 318
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDS 193
++ KDL+ W +MI G + G EA+ ++ + ++G +E + + AC+ L +
Sbjct: 319 TRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLEL 378
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+G VHG ++ L +V SL DMYAK G L A F + +IV+W A+I+ F
Sbjct: 379 EYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAF 438
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
A NG A ++ +M G PDS++ +S L C L G+ IH Y V+ FD +
Sbjct: 439 ADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEI 498
Query: 313 VLGTSVIDMYSKCGVPSCARALF-DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ S++ MY+KC A +F D ++ +L+SWN I+++ E L+ +M
Sbjct: 499 TVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHF 558
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP--TEKHYAC--MVDLLARA 427
+ KPD T +LL + + G V Y I+ C ++D+ A+
Sbjct: 559 SGNKPDSITITTLLGTCAELTSLGVGN-----QVHCYSIKSGLILDVSVCNGLIDMYAKC 613
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSG 455
G ++ A + DS + + W +L+ G
Sbjct: 614 GSLKHARDVFDS-TQNLDIVSWSSLIVG 640
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 305/529 (57%), Gaps = 23/529 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SA +LF++L R V ++NS+I Y L +Y QM+ + D +T L C
Sbjct: 203 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L +G+ + A++ + + +++L++Y KCG ++ A+ FEKM +++V W+S
Sbjct: 263 NSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G +G+ A+ ++M+KEG+ D V ++ ACA G G VH Y +
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ ++ V +L+DMY K G +D A+ VF M +I++W +I
Sbjct: 383 MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL-------------- 428
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+PDS ++ L ACA + L+ GK IHGY +R + + + +++D+Y KCG
Sbjct: 429 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
V AR LFD + S+DL+SW V+I+ YG+HG+G EA++ F +M + ++PD +F S+L
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSGL+E+G +F +M + + I+P +HYACMVDLL+R G + +A + ++++ P
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL GC + + EKVA++V +L P++ G + L++N +A +KWEEV +R+ +
Sbjct: 602 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 661
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIM-EDKSHNQYEDIVYVLKKLYLEMR 554
K G++K PG S +E+ G+++ F+ + SH + I +LKK+ +M+
Sbjct: 662 GKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 227/516 (43%), Gaps = 84/516 (16%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R V YN+ I+ + + + + L K ++ ++ T++ L+ C L G+++
Sbjct: 64 RQVTDYNAKILHFCQLGNLENAMELVCMCQKSEL--ETKTYSSVLQLCAGSKSLTDGKKV 121
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK------------------ 140
D +G +++LY CG + E F+ M++K
Sbjct: 122 HSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181
Query: 141 ---------------------------------DLVCWSSMINGLVFNGQPREAVDAYKR 167
D++ W+SMI+G V NG ++ YK+
Sbjct: 182 KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQ 241
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M GID D ++ ++ CA+ G G +VH +I+ + +L+DMY+K G
Sbjct: 242 MMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGD 301
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD A VF+ M N+V+W ++I+G+ ++G + + LL +M+ G + D V+ S L A
Sbjct: 302 LDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHA 361
Query: 288 CAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
CA+ G L GK +H Y + NL + +++DMY+KCG A ++F M +D+ISW
Sbjct: 362 CARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISW 421
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N +I GE +KPD T A +L A + +E G+ ++
Sbjct: 422 NTMI--------GE-------------LKPDSRTMACILPACASLSALERGKEIHGYILR 460
Query: 407 KYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFS 463
+++H A +VDL + G + A + D M L W ++S G H + +
Sbjct: 461 NG--YSSDRHVANALVDLYVKCGVLGLARLLFD-MIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 464 IGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQKW 496
I + + PD++ +++ S+ +EQ W
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 183/392 (46%), Gaps = 30/392 (7%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK+ N ++ +Y D+ A ++FE++ R V ++ S+I Y+R +
Sbjct: 278 IKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L QM KE V+ D T L AC L G+++ +++FV ++++++Y
Sbjct: 338 RLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M+ A F M KD++ W++MI L +P D M
Sbjct: 398 TKCGSMDGANSVFSTMVVKDIISWNTMIGEL----KP-----------------DSRTMA 436
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA L G +HGY +R + D V +LVD+Y K G L LA +F +
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W +ISG+ +G + EM+ G EPD VS +S L AC+ G L+ G
Sbjct: 497 DLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF- 555
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ + + DFN+ ++D+ S+ G S A + + + D W ++ I+
Sbjct: 556 -FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIY 614
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
E A + ++ E ++P+++ + LL+ +
Sbjct: 615 HDIELAEKVAERVFE--LEPENTGYYVLLANI 644
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 297/557 (53%), Gaps = 33/557 (5%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y N + + +LF + + S+I Y+ P + LG + M+ + PD +
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK-------------CG 125
F LK+C LMDL +GE + + +G D++ G++++N+Y K G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 126 KMNEAMVA-------------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
++ + M FE M KDLV W+++I G NG E + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M + D + ++ A+ D G +HG SIR+ L+ D+ V +SL+DMYAK
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ + VF ++ + ++W ++I+G QNGL L +M +P S S S +
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
ACA + L LGK +HGY R FD N+ + +S++DMY+KCG A+ +FD+M+ RD++S
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I +HG +A+ LF QM +KP+H F ++L+A SH GLV+E +F+ M
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ I P +HYA + DLL RAG +EEA + M P ++W LLS C H +
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA 528
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
EKVA ++L+++P++ G + L++N ++ ++W+E A R +MR+ G++K P S +EV +
Sbjct: 529 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 588
Query: 526 LHAFIMEDKSHNQYEDI 542
++AF+ D+SH YE I
Sbjct: 589 VYAFMAGDESHPCYEKI 605
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 102/190 (53%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I+ L A +I +Y + + ++F L R ++NSII + E L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ QM+ ++P S +F+ + AC L L +G+++ G+ ++F+ SS++++Y
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + A F++M+ +D+V W++MI G +GQ +A++ +++M+ EGI + V M
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFM 445
Query: 182 GLIQACADLG 191
++ AC+ G
Sbjct: 446 AVLTACSHGG 455
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 312/545 (57%), Gaps = 4/545 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + + A++LF+++ R + ++N++I ++ + E+L L +M + +RPD
Sbjct: 185 MLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPD 244
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +L ++ DL+MG + + V G+ D+ + ++++ +Y+KCG+ + E
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLE 304
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD+VCW+ MI+GL+ G+ +A+ + M G D + ++ +CA LG
Sbjct: 305 TIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHGY +R+ LD S + MYAK GHLD + +F+ M+ ++V+W A+ISG AQ
Sbjct: 365 GASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQ 424
Query: 256 NGLAGSTLELLMEMQSCGFEP-DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G L L EM+ + DS+++VS L AC+ G L +G+ IH +R F L
Sbjct: 425 HGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTL 484
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
T+++DMYSKCG A+ F+ + +D++SW +IA YG HG G+ AL ++ + +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFG 544
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP+H F ++LS+ SH+G+V++G F MV + ++P +H AC+VDLL RA VE+A
Sbjct: 545 MKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDA 604
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
K T P + V +L H + K + + + + +++L P D G + + + FA
Sbjct: 605 FKFYKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIELKPVDAGHYVRLGHSFAAM 664
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++W++V+ MR G+KK+PG+S +E+NG+ F M SH+ ++ V +LK L EM
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEINGKTTTFFMNHTSHS--DETVSLLKLLSREM 722
Query: 554 RAISS 558
S
Sbjct: 723 MQFGS 727
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 243/477 (50%), Gaps = 9/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARK+F+E+ R V + ++I YSR E L +M + ++P
Sbjct: 87 LVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPS 146
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L + L+ A+ G+ D+ V +SMLNLY KC ++ +A F+
Sbjct: 147 PVTFLEMLSGISEITQLQCLHAF---ALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFD 203
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+++D+V W++MI+G F E + RM+ +G+ D+ + + D
Sbjct: 204 QMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + + D+ ++T+L+ MY K G + + V + + ++V W +ISG +
Sbjct: 264 GRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMR 323
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G A L + EM G + S ++ S + +CAQ+G LG S+HGY +R+ + +
Sbjct: 324 LGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPA 383
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETM 373
S I MY+KCG + LF++M RDL+SWN II+ + HG +AL LF +M +T+
Sbjct: 384 LNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTV 443
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ D T SLL A S +G + GR +++ + I+P +VD+ ++ G +E A
Sbjct: 444 QQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSF-IRPCTLVDTALVDMYSKCGYLEAA 502
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
+ +S+ T + W L++G H K I ++ + L + P+ + A++S+
Sbjct: 503 QRCFNSI-TWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSS 558
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 209/423 (49%), Gaps = 6/423 (1%)
Query: 38 LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
L +NS I S +VL ++ M+ + PD+ TF LKAC SL L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLS 67
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I +K + G+ +D ++ SS++NLY K G + A F++M+ +D+V W++MI G
Sbjct: 68 IHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGI 127
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA K M+ +GI V + ++ +++ + +H +++ D+ V S
Sbjct: 128 FGEACSLVKEMRFQGIKPSPVTFLEMLSGISEITQLQ---CLHAFALVYGFECDIAVMNS 184
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
++++Y K + A +F M + ++V+W +ISGFA L+LL M+ G PD
Sbjct: 185 MLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPD 244
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
+ ++L + L++G+ +H V FD ++ L T++I MY KCG + + +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLE 304
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+ +D++ W V+I+ G E+AL +F +M+ + AS++++ + G +
Sbjct: 305 TIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G ++ + T + + + A+ G ++++L + + M+ E L W A++SG
Sbjct: 365 GASVHGYVLRQGYTLDTPALNS-FITMYAKCGHLDKSLILFERMN-ERDLVSWNAIISGH 422
Query: 457 HNH 459
H
Sbjct: 423 AQH 425
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
++ I +Y + + LFE + R + ++N+II +++ + L L+ +M +
Sbjct: 383 ALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKT 442
Query: 72 VRP-DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V+ DS T L+AC S L +G I + V ++++++Y KCG + A
Sbjct: 443 VQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAA 502
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F + KD+V W ++I G F+G+ A++ Y G+ + V+ + ++ +C+
Sbjct: 503 QRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHN 562
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTS------LVDMYAKTGHLDLASHVFK-NMSRINI 243
G + GL + +R D V+ + +VD+ + ++ A +K N +R +I
Sbjct: 563 GMVQQGLKIFSSMVR-----DFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSI 617
Query: 244 VTWGALISGFAQNG 257
G ++ NG
Sbjct: 618 DVLGIILDASHANG 631
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 307/530 (57%), Gaps = 7/530 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
+ +LF LP + +YN+II+ Y+R + E LG++ + K + D + + A +AC
Sbjct: 266 SNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAV 325
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ G ++ +++ +++ V +++L++Y KCG + EA + FE+M +D V W+++
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I NG + + + M + G++ DE +++ACA G+ +H I+ +
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRM 445
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA---QNGLAGSTLEL 265
LD V +L+DMY+K G ++ A + ++ +V+W A+ISGF+ Q+ A T
Sbjct: 446 GLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK 505
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
++EM G +PD+ + + L CA + ++LGK IH +++ + + ++++DMYSK
Sbjct: 506 MLEM---GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSK 562
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG + +F++ +RD ++WN ++ Y HG GEEAL +F M VKP+H+TF ++
Sbjct: 563 CGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAV 622
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L A H GLVE+G ++F M+S Y + P +HY+C+VD++ R+G+V +AL++++ M E
Sbjct: 623 LRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEA 682
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
+W LLS C H + EK A +L+L P+D + L+SN +A W EV +RK
Sbjct: 683 DAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRK 742
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
MR +G+KK PG S +E+ E+HAF++ DK+H + ++I L L EM+
Sbjct: 743 MMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK 792
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 234/506 (46%), Gaps = 76/506 (15%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y G+ DI A+KLF+ +P G R + F D +TF
Sbjct: 118 YAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVF----------------DRTTF 161
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA----FE 135
V LK+C SL D G +I AV++G+ DV GS++L++Y KC N+ + F+
Sbjct: 162 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFK 221
Query: 136 KMQR------------------KDLVCWSSMIN------------GLVFNGQPR------ 159
+MQ+ D+V ++ ++ +FN P
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281
Query: 160 --------------EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
EA+ ++ ++K G+ DEV + G +ACA + GL VHG S++
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMK 341
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
++ V +++DMY K G L A VF+ M + V+W A+I+ QNG TL L
Sbjct: 342 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSL 401
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
+ M G EPD + S L ACA L G IH ++ R + +G ++IDMYSK
Sbjct: 402 FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSK 461
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG+ A L D++ + ++SWN II+ + + EEA F +M+E V PD+ T+A++
Sbjct: 462 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 521
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L ++ VE G+ ++ K ++Q + +VD+ ++ G +++ +++ +
Sbjct: 522 LDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQD-FQLIFEKAPNR 579
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAK 470
W A++ G H +GE+ K
Sbjct: 580 DFVTWNAMVCGYAQH---GLGEEALK 602
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 6/385 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +YG +V A +FEE+ R ++N+II A+ + + + L L+ M++ + PD
Sbjct: 354 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 413
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ LKAC L G EI + ++ G D FVG +++++Y KCG M +A +
Sbjct: 414 EFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHD 473
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + +V W+++I+G Q EA + +M + G+D D ++ CA+L
Sbjct: 474 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 533
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I++ L D + ++LVDMY+K G++ +F+ + VTW A++ G+AQ
Sbjct: 534 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 593
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--DFNLV 313
+GL L++ MQ +P+ + ++ L AC +G ++ G + + D L
Sbjct: 594 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 653
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ V+D+ + G S A L + M D + W +++ IHG+ E A +++
Sbjct: 654 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQ- 712
Query: 373 MVKPDHSTFASLLSAL-SHSGLVEE 396
++P+ S LLS + +++G+ E
Sbjct: 713 -LEPEDSAAYVLLSNIYANAGMWNE 736
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 236/525 (44%), Gaps = 85/525 (16%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
++R LF P+R + S +SPF+ L + + TF+ + C
Sbjct: 5 TSRHLF---PIRFFFNFQS--------KSPFKTLPISPFSSYQATPTKKKTFSHIFQECS 53
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L G++ + + + VFV + ++ +Y+KC + A F+ M ++D V W++
Sbjct: 54 DRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNA 113
Query: 148 MINGL-----------VFNGQPREAVDAYK----RMKKEGIDADEVVMMGLIQACADLGD 192
M+ G +F+ P + RM + G D ++++C+ L D
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLED 173
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT--------------------------- 225
G+ +HG +++ + DV ++L+DMYAK
Sbjct: 174 HGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQL 233
Query: 226 -GHL--------------------------DLASHVFKNMSRINIVTWGALISGFAQNGL 258
GH D ++ +F ++ N+ ++ A+I G+A++
Sbjct: 234 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDK 293
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTS 317
L + +Q G D VSL A ACA I G +HG +++ N+ + +
Sbjct: 294 GIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA 353
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMY KCG A +F++M SRD +SWN IIA++ +G+ E+ LSLF+ M+++ ++PD
Sbjct: 354 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 413
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T+ S+L A + + G + ++ K ++ ++D+ ++ G +E+A K+
Sbjct: 414 EFTYGSVLKACAGWQALNCGMEIHNRII-KSRMGLDSFVGIALIDMYSKCGMMEKAEKLH 472
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDL 480
D ++ E + W A++SG K+ +K K+L++ +PD+
Sbjct: 473 DRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 516
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++ +Y ++ + +FE+ P R T+N+++ Y++ E
Sbjct: 541 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 600
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
L ++ M E+V+P+ +TF L+AC + ++ G + + YG D + S ++
Sbjct: 601 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLS-NYGLDPQLEHYSCVV 659
Query: 119 NLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVD-AYKRMKKEGIDAD 176
++ + G++++A+ E M D V W ++++ +G A AY ++ E D+
Sbjct: 660 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSA 719
Query: 177 EVVMMGLIQACADL 190
V++ I A A +
Sbjct: 720 AYVLLSNIYANAGM 733
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 314/593 (52%), Gaps = 39/593 (6%)
Query: 1 MIKTNLSAYGNSVGRIIAL--YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M+ T L G + R++A ++ ++ + V ++N+ I Y
Sbjct: 80 MVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIE 139
Query: 59 EVLGLYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
LY +M+ ++PD+ T+ + LK C +G + ++ G+ D+FV ++
Sbjct: 140 GGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNAS 199
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ + + CG+++ A F K + +DLV W+SMI G V G EA+ YK M+ E + +E
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ M+G+I +C+ + D G H Y L + + +L+DMY K G L A +F N
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDN 319
Query: 238 MSRINIVTWGALISGFAQNGL-------------------------------AGSTLELL 266
M++ +V+W ++ G+A+ G L L
Sbjct: 320 MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALF 379
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EMQ EPD V++V+ L AC+Q+G L +G IH Y R + ++ LGT+++DMY+KC
Sbjct: 380 HEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKC 439
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + A +F+++ R+ ++W +I +HG+ ++ALS F +MI + PD TF +L
Sbjct: 440 GNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVL 499
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
SA H GLVEEGR +F M SK+ + P KHY+CMVDLL RAG +EEA ++V +M
Sbjct: 500 SACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAAD 559
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
AV AL C + IGE+ A K+L+++P D G + L+++ ++ + W+E RK
Sbjct: 560 AAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKL 619
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLYLEMR 554
M G++K PG S+VE+NG +H F++ D SH Q YE +V + K+L + +R
Sbjct: 620 MNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLDVIVR 672
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 285/486 (58%), Gaps = 2/486 (0%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ P+ + ++ L C L LK G I + +D+ + + +LN+Y KCG + EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+KM KD+V W+ +I+G +GQ EA+ + +M G +E + L++A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H +S++ +++V V +SL+DMYA+ H+ A +F +++ N+V+W ALI+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G A+ G + L ++M GFEP + S ACA G L+ GK +H + ++
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
Query: 312 LV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +G ++IDMY+K G A+ +F ++ +D++SWN II+ Y HG G EAL LF QM+
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V+P+ TF S+L+A SHSGL++EG+Y+F+LM K+KI+ H+ +VDLL RAG +
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRL 459
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA K ++ M +P AVW ALL C HK +G A+++ +L+P D G H L+SN +
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A + + A VRK M++SG+KK P S VE+ E+H F+ D SH E+I + +K+
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 579
Query: 551 LEMRAI 556
+++ I
Sbjct: 580 GKIKEI 585
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 173/343 (50%), Gaps = 2/343 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + A+ LF+++P + + ++ +I YS+ E L L+ +M+ +P+
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + LKA + G ++ +++ GY +V VGSS+L++Y + M EA V F
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ K++V W+++I G G+ + + +M ++G + + ACA G
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQ 325
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ + +L+DMYAK+G + A VF+ + + +IV+W ++ISG+AQ
Sbjct: 326 GKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ 385
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
+GL L+L +M +P+ ++ +S L AC+ G L G+ + + + +
Sbjct: 386 HGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 445
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+V+D+ + G + A ++M + + W ++ S +H
Sbjct: 446 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH 488
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 187/523 (35%), Positives = 299/523 (57%), Gaps = 4/523 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
++ +Y + AR LF+ + V ++NS+I YS+ L +M ED V+
Sbjct: 340 LLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKV 398
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ T L C + +EI A+ G+ +D V ++ + Y KCG ++ A
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M+ K + W+++I G V NG PR+A+D Y M+ G++ D + L+ ACA L
Sbjct: 459 FCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSL 518
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG +R LD + SLV +Y + G + LA F NM N+V W +I+GF
Sbjct: 519 SCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGF 578
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+QN L++ +M S PD +S++ AL AC+Q+ L+LGK +H + V+ +
Sbjct: 579 SQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHS 638
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S+IDMY+KCG ++ +FD++ + ++WNV+I YGIHGHG +A+ LF M
Sbjct: 639 FVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNA 698
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+PD TF +LL+A +H+GLV EG + M S + I+P +HYAC+VD+L RAG + E
Sbjct: 699 GFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNE 758
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL++V+ + +P +W +LLS C N++ IGEKVA K+L+L PD + L+SNF+A
Sbjct: 759 ALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYAR 818
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
KW+EV +R+ M++ G++K G S +E+ G++ F++ D+S
Sbjct: 819 LGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDES 861
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 240/450 (53%), Gaps = 11/450 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
+ R++ +Y + + +F + + +N+++ Y R + + ++ +MI +
Sbjct: 132 ITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTE 191
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD+ T +KACV + D+++GE + A++ +DVFVG++++ +Y K G + A+
Sbjct: 192 FVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAV 251
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM--KKEGIDADEVVMMGLIQACAD 189
F+KM +++LV W+S++ + NG E+ +K + EG+ D M+ +I CA
Sbjct: 252 KVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCAR 311
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G+ R G+ HG +++ L ++KV +SL+DMY+K G+L A +F + N+++W ++
Sbjct: 312 QGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEK-NVISWNSM 370
Query: 250 ISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLAC-AQIGFLKLGKSIHGYTVRR 307
I G++++ ELL +MQ + + V+L++ L C +I FLKL K IHGY +R
Sbjct: 371 IGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKL-KEIHGYALRH 429
Query: 308 --FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ ++ + + Y+KCG A +F M+S+ + SWN +I + +G +AL L
Sbjct: 430 GFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDL 489
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+L M + ++PD T ASLLSA + + G+ M+ + + E +V L
Sbjct: 490 YLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSML-RNGFELDEFICISLVSLYV 548
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G++ A D+M E L W +++G
Sbjct: 549 QCGKILLAKLFFDNME-EKNLVCWNTMING 577
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 160/309 (51%), Gaps = 7/309 (2%)
Query: 83 LKACVSLMDLKMGEEIWR-KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
L+ C ++++G +I + + NDV + + ++ +Y C ++ + F +RK+
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
L W+++++G + N R+AV + M D + +I+AC + D R G +VH
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVH 219
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G++++ + DV V +L+ MY K G ++ A VF M + N+V+W +++ +NG+
Sbjct: 220 GFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFE 279
Query: 261 STLELLMEMQSC--GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ L + + G PD ++V+ + CA+ G ++LG HG ++ L + +S
Sbjct: 280 ESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSS 339
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKP 376
++DMYSKCG AR LFD +++ISWN +I Y A L +M +E VK
Sbjct: 340 LLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKV 398
Query: 377 DHSTFASLL 385
+ T ++L
Sbjct: 399 NEVTLLNVL 407
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 285 LLACAQIGFLKLGKSIHGY--TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L C + +++G+ IH + T F ++VL T ++ MYS C P + +F+ + ++
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSAL--SHSGLVEEGRY 399
L WN +++ Y + +A+ +F++MI T PD+ T ++ A + + E +
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVH 219
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
F L K K+ ++ + + G VE A+K+ D M + L W +++ C
Sbjct: 220 GFAL---KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM-PQRNLVSWNSVMYAC 272
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K++L+ + +I +Y + ++ +F+ + L+G T+N +I Y + +
Sbjct: 630 VKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAI 689
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNL 120
L+ M RPDS TF L AC + G E + L G + + ++++
Sbjct: 690 ELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDM 749
Query: 121 YVKCGKMNEAMVAFEKMQRK-DLVCWSSMIN 150
+ G++NEA+ ++ K D WSS+++
Sbjct: 750 LGRAGRLNEALELVNELPDKPDSRIWSSLLS 780
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 309/536 (57%), Gaps = 2/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + AR++F+E+ +R TYN++I Y + E E + ++ + + + +PD
Sbjct: 248 LLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENL-DQFKPD 306
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L AC L DL + + I+ + G+ + V + ++++Y KCG M A F
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFN 366
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ KD V W+S+I+G + +G EA+ +K M AD + + LI L D +F
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKF 426
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + +D+ V +L+DMYAK G + + +F +M ++ VTW +IS +
Sbjct: 427 GKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVR 486
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G + L++ +M+ PD + + L CA + +LGK IH +R ++ L +
Sbjct: 487 FGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG + +F++M RD+++W +I +YG++G GE+AL F+ M ++ +
Sbjct: 547 GNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGI 606
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD F +L+ A SHSGLVE+G F+ M + YKI P +HYAC+VDLL+R+ ++ +A
Sbjct: 607 VPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + +M EP ++W ++L C E+V++++++LNPDD G L SN +A +
Sbjct: 667 EFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
KW++V+ +RK++R +KK PGYS +E+ ++H F D S Q E I L+ LY
Sbjct: 727 KWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILY 782
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 247/474 (52%), Gaps = 27/474 (5%)
Query: 14 GRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G++I Y S+ +F + P + V +NSII A+S+ + L Y ++ + V
Sbjct: 43 GKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKV 102
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD TF +KAC L D +MG+ ++++ +E+G+ +D++VG++++++Y + G ++ A
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQ 162
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +DLV W+S+I+G +G EA++ Y ++ I D + ++ A A+L
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLV 222
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G +HG++++ +N V L+ MY K A VF M + VT+ +I G
Sbjct: 223 VKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICG 282
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ + + ++++ +E F+PD +++ S L AC + L L K I+ Y +R F
Sbjct: 283 YLKLEMVEESVKMFLENLD-QFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLE 341
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +ID+Y+KCG AR +F+ M+ +D +SWN II+ Y G EA+ LF M+
Sbjct: 342 STVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 372 TMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ DH T+ L+S + HS ++ G Y DL VS +
Sbjct: 402 MEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIY-IDLSVSN-----------AL 449
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+D+ A+ GEV ++LKI +SM T + W ++S C F+ G +V ++ K
Sbjct: 450 IDMYAKCGEVGDSLKIFNSMGTLDTVT-WNTVISACVRFGDFATGLQVTTQMRK 502
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 280/473 (59%), Gaps = 2/473 (0%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+AC + D+ +G + V+ +++L++Y KCG ++ A++ F+ M + +
Sbjct: 5 LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTV 64
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+S+I G EA+ + M +EG+ D + ++ ACA G G VH Y
Sbjct: 65 VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY 124
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ ++ V +L+DMYAK G ++ A+ VF M +I++W +I G+++N L
Sbjct: 125 IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEA 184
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L L +M +PD +L L ACA + L GK +HG+ +R F + + +++DM
Sbjct: 185 LSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDM 243
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y KCGVP AR LFD + ++DLI+W V+IA YG+HG G A++ F +M + ++PD +F
Sbjct: 244 YVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSF 303
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
S+L A SHSGL++EG +F++M + ++P +HYAC+VDLLAR+G++ A K + SM
Sbjct: 304 ISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP 363
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
EP +W ALLSGC H + EKVA+ V +L P++ G + L++N +A +KWEEV
Sbjct: 364 IEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKK 423
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+R+ + + G+KK PG S +EV ++H F+ + SH Q + I +LK+L +M+
Sbjct: 424 LRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMK 476
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 182/360 (50%), Gaps = 10/360 (2%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
+F+ + +R V T+ S+I AY+R+ E + L+++M +E V PD T T L AC
Sbjct: 55 VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGS 114
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L+ G+++ E +++FV ++++++Y KCG M +A F +M KD++ W++MI G
Sbjct: 115 LENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGG 174
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
N P EA+ + M E + D + ++ ACA L G VHG+ +R D
Sbjct: 175 YSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSD 233
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+V +LVDMY K G LA +F + +++TW +I+G+ +G + + EM+
Sbjct: 234 QQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ 293
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN----LVLGTSVIDMYSKCGV 327
G EPD VS +S L AC+ G L G + V + + N L ++D+ ++ G
Sbjct: 294 AGIEPDEVSFISILYACSHSGLLDEGWRF--FNVMQDECNVKPKLEHYACIVDLLARSGK 351
Query: 328 PSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ A M D W +++ IH + A + + E ++P+++ + LL+
Sbjct: 352 LAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE--LEPENTGYYVLLA 409
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 150/278 (53%), Gaps = 6/278 (2%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
M+ ++QACA+ GD G +VHG ++ ++ +L+DMYAK G LD A VF MS
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+VTW +LI+ +A+ GL+ + L EM G PD ++ + L ACA G L+ GK
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 300 IHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y +R D N+ + +++DMY+KCG A ++F +M +D+ISWN +I Y +
Sbjct: 121 VHNY-IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EALSLF M+ M KPD +T A +L A + ++ G+ ++ +
Sbjct: 180 LPNEALSLFGDMVLEM-KPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A +VD+ + G A + D + T+ L W +++G
Sbjct: 239 A-LVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAG 274
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 308/545 (56%), Gaps = 4/545 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y D+ SAR LF+ +P R + ++N++I Y E L L+ M V
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSV 293
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T T + AC L D ++G +I + G+ D+ V +S+ +Y+ G EA
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEK 353
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M KD+V W++MI+G +N P +A+D Y+ M ++ + DE+ + ++ ACA LGD
Sbjct: 354 LFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD 413
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H +I+ L V V +L++MY+K +D A +F N+ R N+++W ++I+G
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
N L +M+ +P++++L +AL ACA+IG L GK IH + +R +
Sbjct: 474 LRLNNRCFEALIFFRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +++DMY +CG + A F+ Q +D+ SWN+++ Y G G + LF +M++
Sbjct: 533 DFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVK 591
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V+PD TF SLL S +V +G +F M +Y + P KHYAC+VDLL RAGE++
Sbjct: 592 ARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQ 650
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA K + M P AVW ALL+ C H +GE A+++ +L+ +G + L+ N +A
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYA 710
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW EVA VR+ M+++G+ G S VEV G++HAF+ +DK H Q ++I VL Y
Sbjct: 711 DCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYE 770
Query: 552 EMRAI 556
+M +
Sbjct: 771 KMSEV 775
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 241/475 (50%), Gaps = 8/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
+A++ ++V A +F ++ R + ++N ++ Y+++ E + LY++M+ V+P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF L+ C + DL G E+ V GY D+ V ++++ +YVKCG + A + F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M R+D++ W++MI+G NG E + + M+ +D D + + +I AC LGD R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y I +D+ V SL MY G A +F M +IV+W +ISG+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N L ++ M +PD +++ + L ACA +G L G +H ++ R ++
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++I+MYSKC A +F + +++ISW IIA ++ EAL F QM T+
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTL 494
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+P+ T + L+A + G + G+ V + + + ++D+ R G + A
Sbjct: 495 -QPNAITLTAALAACARIGALMCGKE-IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIA 552
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALV 486
+S + ++ W LL+G + S+ ++ +++K + PD++ +L+
Sbjct: 553 WNQFNSQKKD--VSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLL 605
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 200/403 (49%), Gaps = 12/403 (2%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + L N M + V D F ++ C + G +++ A+ V +G++ L
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFL 136
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADE 177
++V+ G + +A F KM ++L W+ ++ G G EA+ Y RM G+ D
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDV 196
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++ C + D G VH + +R LD+ V +L+ MY K G + A +F
Sbjct: 197 YTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M R +I++W A+ISG+ +NG+ L+L M+ +PD ++L S + AC +G +LG
Sbjct: 257 MPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IH Y + F ++ + S+ MY G A LF +M +D++SW +I+ Y +
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYN 376
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
E+A+ + M + VKPD T A++LSA + G ++ G + + K I+
Sbjct: 377 FLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG-----VELHKLAIKARLIS 431
Query: 417 YAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
Y ++++ ++ +++AL I ++ + ++ W ++++G
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAG 473
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 8/311 (2%)
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++GL NG+ EA+ M++ + DE V + L++ C G V+ ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+L V++ + + M+ + G+L A +VF MS N+ +W L+ G+A+ G + L
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 269 MQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M G +PD + L C I L G+ +H + VR ++ ++ + ++I MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD+M RD+ISWN +I+ Y +G G E L LF M V PD T S++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEP 444
A G GR D+ C + + AG EA K+ M +
Sbjct: 306 ACELLGDRRLGR---DIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKD 362
Query: 445 GLAVWVALLSG 455
+ W ++SG
Sbjct: 363 -IVSWTTMISG 372
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L +Y +I +Y I A +F +P + V ++ SII FE L
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ QM K ++P++ T T AL AC + L G+EI + G G D F+ +++L++Y
Sbjct: 485 IFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
V+CG+MN A F Q+KD+ W+ ++ G GQ V+ + RM K + DE+ +
Sbjct: 544 VRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFI 602
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+ C R GL + ++K +VD+ + G L A + M
Sbjct: 603 SLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 242 -NIVTWGALISG 252
+ WGAL++
Sbjct: 663 PDPAVWGALLNA 674
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 296/541 (54%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY-NQMIKEDVRP 74
I+ +Y D+V A + L + S++ Y + E L + ++ + V
Sbjct: 139 IVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVML 198
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T A+ A L ++ G+ V G D+ + +++L+ YVK G +M F
Sbjct: 199 TPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLF 258
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E M +D++ WS MI G V +G E + Y+ M K + + V ++ ++QACA + D+
Sbjct: 259 EGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAE 318
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH ++ L+V V T+LVDMY K + A +F M + ++V W A+I G
Sbjct: 319 EGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLT 378
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN L G +L + M PD++++V L AC++ G +L +HGY VR F+ N
Sbjct: 379 QNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAF 438
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++D+YSKCG A +F+ +D++ W +IA YG HG G+EA++L+ +MI +
Sbjct: 439 VAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASS 498
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+ TF S+LSA SHSGLV+EG FD M + + P +H + MVDLL RAGE++EA
Sbjct: 499 IQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEA 558
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++ + M W ALL+ C H + + AK +LKL+PD +G + L++N +A +
Sbjct: 559 IRFIRGMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYD 618
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+KWE V R +R ++KVPGYS VEV +H FI +++H +++I +L L ++
Sbjct: 619 EKWESVKDTRDMVRGRDLRKVPGYSSVEVGNLVHTFIAGERTHQDWDNICTLLCDLSRKL 678
Query: 554 R 554
R
Sbjct: 679 R 679
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 199/377 (52%), Gaps = 5/377 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +++ Y D ++ +LFE + R V T++ +I Y + E L +Y +M+K V
Sbjct: 238 VNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARV 297
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P+S T L+AC ++D + G+ + R AV +G +V V ++++++Y+KC EAM
Sbjct: 298 QPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMC 357
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M +KD+V W+++I GL N P E++ +K M + D + M+ ++ AC++ G
Sbjct: 358 LFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGG 417
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+R + +HGY +R N + V +L+D+Y+K G +D A VF+ + +IV WG++I+G
Sbjct: 418 TRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAG 477
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+ +GL + L M + +P+SV+ VS L AC+ G ++ G I + F
Sbjct: 478 YGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVP 537
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI-SWNVIIASYGIHGHGEEALSLFLQM 369
N ++++D+ + G A M R + +W ++A+ H +S
Sbjct: 538 NAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAA--CREHNNTKMSKVAAK 595
Query: 370 IETMVKPDHSTFASLLS 386
+ PDH + +LL+
Sbjct: 596 SLLKLDPDHVGYYNLLT 612
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 221/438 (50%), Gaps = 16/438 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR LF+E P N+++ A+ R + L ++ VR D TF++ L+AC +
Sbjct: 53 ARDLFDEFPSPTPRLANALLRAHIRARQWRAAILLGPRL---RVRLDGFTFSLLLRACAA 109
Query: 89 LMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L L G + A+ D FV ++++ +Y +CG M A+ A+ +++ D+V +S
Sbjct: 110 LPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTS 169
Query: 148 MINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++ G NG EA++ + R + +G+ V ++ + A A LG R G + H Y +R
Sbjct: 170 VVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRN 229
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
L D+ + +++ Y K G + +F+ M+ +++TW +I G+ Q+G A L +
Sbjct: 230 SLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMY 289
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EM +P+SV+LVS L ACA + + GK +H V + + + T+++DMY KC
Sbjct: 290 REMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKC 349
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
A LF +M +D+++W +I + E+L +F M+ PD T +L
Sbjct: 350 SCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVL 409
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKH----YACMVDLLARAGEVEEALKIVDSMS 441
+A S E G + + Y ++ + A ++DL ++ G+++ A+++ + +
Sbjct: 410 AACS-----EFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEG-T 463
Query: 442 TEPGLAVWVALLSGCHNH 459
TE + VW ++++G H
Sbjct: 464 TEKDIVVWGSMIAGYGAH 481
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 317/581 (54%), Gaps = 10/581 (1%)
Query: 7 SAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
SA+G+ + + +Y + A+K+ +P + +YN+II+ Y+R + F+ L
Sbjct: 311 SAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKS 370
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ ++K + D T + AL AC S+ G ++ AV+ +++ V +++L++Y K
Sbjct: 371 FQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGK 430
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
C + EA F+ M+R+D V W+++I NG E + + M ++ D+ +
Sbjct: 431 CKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSV 490
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
++ACA G+ +H I+ + D V +LVDMY K G ++ A + + +
Sbjct: 491 LKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTM 550
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
V+W A+ISGF+ + + M G PD+ + + L CA + + LGK IH
Sbjct: 551 VSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQ 610
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+++ ++ + ++++DMYSKCG ++ +F++ +RD ++WN ++ Y HG GEEA
Sbjct: 611 IIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEA 670
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L LF M VKP+H+TF S+L A +H GLV++G ++FD+M+S+Y + P +HY+CMVD
Sbjct: 671 LKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVD 730
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
+L R+G ++EAL +V M E +W LLS C H + EK + +L+L+P D
Sbjct: 731 ILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSA 790
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
L+SN +A W V+ +RK MR + +KK PG S +E+ E+HAF++ DK H + E+I
Sbjct: 791 CVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEI 850
Query: 543 VYVLKKLYLEMRAI------SSWLQGHMEEHEEHDPLSTAA 577
L L EM+++ L +EE + + L T A
Sbjct: 851 YEKLGVLIGEMQSVGYIPDCDVLLDEEVEEPAQLEELRTCA 891
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 256/489 (52%), Gaps = 27/489 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S II+ Y ++ ARK F E+P R V ++NS+I + + + + ++ +M +
Sbjct: 117 SYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCG 176
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V D ++ V LKAC +L + MG ++ V+ G+ DV GS++L +Y KC ++++++
Sbjct: 177 VGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSL 236
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F ++ K+ V WS+MI G V N + E ++ +K M+ G+ + + L ++CA L
Sbjct: 237 SVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALS 296
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H ++++ D+ V T+ +DMYAK G + A V +M + ++ ++ A+I
Sbjct: 297 ALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIV 356
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF- 310
G+A++ L+ + G D ++L AL ACA I G+ +HG V+
Sbjct: 357 GYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMS 416
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+ + +++DMY KC + A LFD M+ RD +SWN IIA+ +G+ EE L+ F MI
Sbjct: 417 NICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMI 476
Query: 371 ETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ ++PD T+ S+L A + H+ +++ G FD V A
Sbjct: 477 HSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSG-MGFDSFVG-----------AA 524
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NP 477
+VD+ + G +E+A KI D + + + W A++SG ++ K ++L++ NP
Sbjct: 525 LVDMYCKCGMIEKADKIHDR-TEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583
Query: 478 DDLGIHALV 486
D+ A++
Sbjct: 584 DNFTYAAVL 592
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 215/439 (48%), Gaps = 8/439 (1%)
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
Y DV +S+++ Y CG+M+ A F +M +D+V W+S+I+G + NG+ R+++D +
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M + G+ D + +++AC L + G+ VHG ++ + DV ++L+ MYAK
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
LD + VF + N V+W A+I+G QN LEL EMQ G S
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+CA + L+LGK +H + ++ F ++++GT+ +DMY+KCG + A+ + M L S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
+N II Y G +AL F +++T + D T + L+A + EGR L V
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFS 463
+ A ++D+ + + EA + D M ++ W A+++ C + +++ +
Sbjct: 411 KSISMSNICVANA-ILDMYGKCKALAEASDLFDMMERRDAVS-WNAIIAACEQNGNEEET 468
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM--KKVPGYSVVE 521
+ + ++ PDD + V A Q + + KSGM G ++V+
Sbjct: 469 LAHFASMIHSRMEPDDF-TYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVD 527
Query: 522 VNGELHAFIMEDKSHNQYE 540
+ + DK H++ E
Sbjct: 528 MYCKCGMIEKADKIHDRTE 546
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++ +Y ++ ++ +FE+ P R T+N+++ Y+ E
Sbjct: 611 IIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEA 670
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLN 119
L L+ M +V+P+ +TF L+AC + + G + + E G S M++
Sbjct: 671 LKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVD 730
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDADE 177
+ + G+++EA+ +KM D V W ++++ +G A A + ++ + D+
Sbjct: 731 ILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSA 790
Query: 178 VVMMGLIQA 186
V++ I A
Sbjct: 791 CVLLSNIYA 799
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 288 CAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C++ L GK H + F+ + ++ MY KC A +FD+M RD++S+
Sbjct: 59 CSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSY 118
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
N II+ Y G + A F +M E V +S + L
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFL 157
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 308/541 (56%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+ +ARK+F+ + L ++N++I + L L+ M++++V P+
Sbjct: 236 LVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T A L DL +EI AV+ G+ DV +S++ +Y G+M EA F
Sbjct: 296 LMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFS 355
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ +D + W++MI+G NG P +A++ Y M+ + D+V + + ACA LG
Sbjct: 356 RMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDV 415
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H + + + V +LV+MYAK+ ++ A VFK M ++++W ++I+GF
Sbjct: 416 GIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCF 475
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L M + +P+SV+ ++AL ACA G L+ GK IH + +R+ +
Sbjct: 476 NHKNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYV 534
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++D+Y KCG A A F ++D++SWN+++A + HGHG+ ALS F +M+ET
Sbjct: 535 PNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGE 594
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LL S +G+V +G F M KY I P KHYACMVDLL+R G + E
Sbjct: 595 HPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGY 654
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ M P AVW ALL+GC H+ +GE AK VL+L P+D G H L+S+ +A
Sbjct: 655 NFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAG 714
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W EV+ VRKTMR G++ G S VEV G +HAF+ +D+SH Q ++I VL +Y M+
Sbjct: 715 MWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMK 774
Query: 555 A 555
A
Sbjct: 775 A 775
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 243/494 (49%), Gaps = 12/494 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ ++ +G + A K+F ++P R V ++N ++ Y + E L LY++M+
Sbjct: 132 GNAMLSMLVRFG---ETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
RPD TF L++C + DL MG E+ + G G +V V ++++ +Y KCG +
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEA 248
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M D + W++MI G N + ++ + M ++ ++ + + + + A
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L D F +H +++R DV SL+ MY+ G + A VF M + ++W A+
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAM 368
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRF 308
ISG+ +NG LE+ M+ PD V++ SAL ACA +G L +G +H T + F
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF 428
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ ++++MY+K + A +F M +D+ISW+ +IA + + EAL F
Sbjct: 429 IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRH 488
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ VKP+ TF + L+A + +G + G+ V + I ++DL + G
Sbjct: 489 MLAD-VKPNSVTFIAALAACAATGSLRCGKE-IHAHVLRQGIASEGYVPNALLDLYVKCG 546
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGIHALV 486
+ A + T+ + W +L+G H I ++L+ +PD++ AL+
Sbjct: 547 QTGYAWAQFGAHGTK-DVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALL 605
Query: 487 ---SNFFAMEQKWE 497
S + Q WE
Sbjct: 606 CGCSRAGMVSQGWE 619
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 194/377 (51%), Gaps = 15/377 (3%)
Query: 99 WRKAVELGY--------GNDVF---VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
WR+A E G + F +G++ML++ V+ G+ A F KM +D+ W+
Sbjct: 106 WRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNV 165
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M+ G G EA+D Y RM G D ++++C + D G VH + +R
Sbjct: 166 MVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFG 225
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L ++V V +LV MYAK G ++ A VF MS + ++W A+I+G +N + LEL +
Sbjct: 226 LGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFL 285
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M EP+ +++ S +A + L K IH V+R F ++ S+I MYS G
Sbjct: 286 HMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLG 345
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
A +F +M++RD +SW +I+ Y +G ++AL ++ M V PD T AS L+
Sbjct: 346 RMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALA 405
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + G ++ G +L SK I+ A +V++ A++ +E+A+++ M + +
Sbjct: 406 ACASLGRLDVGIKLHELATSKGFIRYIVVANA-LVEMYAKSKIIEKAIEVFKYMPDKDVI 464
Query: 447 AVWVALLSG-CHNHKKF 462
+ W ++++G C NHK F
Sbjct: 465 S-WSSMIAGFCFNHKNF 480
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 21/318 (6%)
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
DE + L C + GL G++ H +++ +++ M + G A VF
Sbjct: 93 DEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVF 152
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
M ++ +W ++ G+ + G L+L M G PD + L +C + L
Sbjct: 153 AKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLT 212
Query: 296 LGKSIHGYTVRRFDFNLVLGTSVID----MYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+G+ +H + +R F L + V++ MY+KCG AR +FD M D ISWN +IA
Sbjct: 213 MGREVHAHVLR---FGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIA 269
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
+ + E L LFL M+E V+P+ T S+ A SGL+ + + ++ K
Sbjct: 270 GHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA---SGLLSDLDFAKEIHALAVKRG 326
Query: 412 PTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
C ++ + + G + EA + M T ++ W A++SG ++K +K
Sbjct: 327 FATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMS-WTAMISG---YEKNGFPDKAL 382
Query: 470 K-----KVLKLNPDDLGI 482
+ +V ++PDD+ +
Sbjct: 383 EVYALMEVNNVSPDDVTV 400
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 298/534 (55%), Gaps = 4/534 (0%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV-LGLYNQMIKEDVRPDSSTFTVAL 83
D +A LF ++P +N +I + F + + Y QM +RP++ T+
Sbjct: 74 DFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVF 133
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
AC +L+ L G+ ++ G D V S++ +Y +CG++ A F+++ KDLV
Sbjct: 134 IACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLV 193
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W+SMI+G G +AV + M+ G + DE+ ++ ++ AC DLGD G + G+
Sbjct: 194 SWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFV 253
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ ++L+ V ++L+ MY K G L A VF M + ++VTW A+I+G+AQNG++ +
Sbjct: 254 VENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAI 313
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
L M+ G PD ++LV L ACA IG L GK + Y R ++ + T++IDMY
Sbjct: 314 ILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMY 373
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET--MVKPDHST 380
+KCG A +F+ M ++ +SWN +I++ HG +E+LSLF +M + V+P+ +
Sbjct: 374 AKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDIS 433
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
F +LSA H+GLV+EGR FDLM S + + P +H++CMVDLLARAG V EA ++ M
Sbjct: 434 FIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKM 493
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
+P V ALL C + + E+V +L++ P + G + + S FA ++W++ A
Sbjct: 494 PEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSA 553
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+R MR+ G+ K PG S +E+ ++H F D H +D+ V+ L EM+
Sbjct: 554 RMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMK 607
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 196/389 (50%), Gaps = 34/389 (8%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L A G+ +I +Y ++ AR++F+E+ + + ++NS+I YSR +
Sbjct: 152 VLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDA 211
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+GL+ +M PD T L AC L DL +G I VE + FVGS+++ +
Sbjct: 212 VGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGM 271
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++ A F++M +KD+V W++MI G NG EA+ + M++ G++ D++ +
Sbjct: 272 YGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITL 331
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+G++ ACA +G FG + Y+ R L D+ V T+L+DMYAK G LD A VF++M +
Sbjct: 332 VGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQ 391
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVSLVSALLACAQIGFLKLGK 298
N V+W A+IS A +G +L L M G P+ +S + L AC G + G+
Sbjct: 392 KNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGR 451
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+ + + F LV I+ +S C V ARA GH
Sbjct: 452 QL--FDLMSSSFGLV---PKIEHHS-CMVDLLARA-----------------------GH 482
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSA 387
EA +M E KPD +LL A
Sbjct: 483 VHEAWDFIEKMPE---KPDEVVLGALLGA 508
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 304/527 (57%), Gaps = 1/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARK+F+ +P R ++ ++I Y+ ++ E LGL+ M +E+ + FT L A
Sbjct: 162 ARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTL 221
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ G++I AV+ G + V VG++++ +Y KCG +++A+ FE K+ + WS+M
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAM 281
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G +G +A+ + M GI E +G+I AC+DLG + G VH Y ++
Sbjct: 282 ITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGF 341
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ V T+LVDMYAK + A F + +IV W ++I G+ QNG L L
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR 401
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G P+ +++ S L AC+ + L+ GK IH TV+ F + +G+++ MY+KCG
Sbjct: 402 MEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGC 461
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+F +M +RD+ISWN +I+ +G G+EAL LF +M KPD+ TF ++LSA
Sbjct: 462 LKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH GLVE G +F +M ++ + P +HYACMVD+L+RAG+++EA++ +S + + G+
Sbjct: 522 CSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMC 581
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
+W +L C N++ + +G +K+++L + + L+S+ ++ +WE+V VR+ M+
Sbjct: 582 LWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMK 641
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+ K PG S +E+ +H F+++D+ H Q DI L++L +M+
Sbjct: 642 LRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMK 688
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 233/477 (48%), Gaps = 36/477 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR--KESPFEVLGLYNQMIKEDVR 73
++ LY + A+ +FE + + V ++N II YS+ V+ L+ +M E+
Sbjct: 46 LVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTA 105
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P++ TF A +L+D G A+++ DVFVGSS++N+Y K G EA
Sbjct: 106 PNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKV 165
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M ++ V W++MI+G EA+ ++ M++E +E V ++ A
Sbjct: 166 FDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELV 225
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +++ L V V +LV MYAK G LD A F+ S N +TW A+I+G+
Sbjct: 226 NNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGY 285
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
AQ+G + L+L M G P + V + AC+ +G GK +H Y ++ F+ +
Sbjct: 286 AQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQI 345
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T+++DMY+KC AR FD +Q D++ W +I Y +G E+ALSL+ +M
Sbjct: 346 YVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEME 405
Query: 373 MVKPDHSTFASLLSALSHSGLVEEG--------RYWFDL----------MVSK------- 407
+ P+ T AS+L A S +E+G +Y F L M +K
Sbjct: 406 GILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDG 465
Query: 408 ---YKIQPTEK--HYACMVDLLARAGEVEEALKIVDSMS---TEPGLAVWVALLSGC 456
++ P + M+ L++ G +EAL++ + M T+P +V +LS C
Sbjct: 466 TLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSAC 522
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 165/299 (55%), Gaps = 4/299 (1%)
Query: 12 SVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG ++ +Y + A + FE + T++++I Y++ + L L++ M
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLS 304
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+RP TF + AC L G+++ ++LG+ + ++V ++++++Y KC + +A
Sbjct: 305 GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ +Q D+V W+SMI G V NG+ +A+ Y RM+ EGI +E+ M +++AC+ L
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL 424
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G +H +++ L+V + ++L MYAK G L + VF+ M ++++W A+I
Sbjct: 425 AALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMI 484
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
SG +QNG LEL EMQ G +PD V+ V+ L AC+ +G ++ G GY FD
Sbjct: 485 SGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG---WGYFRMMFD 540
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 188/385 (48%), Gaps = 6/385 (1%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P + +F AL L+ G+ + + ++ + V++ +S++NLY KC ++ EA
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREA--VDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE++Q KD+V W+ +ING +G + ++ ++RM+ E + G+ A + L
Sbjct: 63 FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D+ G H +I+ DV V +SL++MY K G A VF M N V+W +IS
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMIS 182
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G+A LA L L M+ + S L A + GK IH V+ +
Sbjct: 183 GYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLS 242
Query: 312 LV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+V +G +++ MY+KCG A F+ ++ I+W+ +I Y G ++AL LF M
Sbjct: 243 IVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMH 302
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ ++P TF +++A S G EG+ D ++ K + +VD+ A+ +
Sbjct: 303 LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLL-KLGFESQIYVMTALVDMYAKCSSI 361
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
+A K D + EP + +W +++ G
Sbjct: 362 VDARKGFDYLQ-EPDIVLWTSMIGG 385
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALF 335
P + S +ALL L+ GK++H ++ + + S++++Y+KC A+ +F
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVF 63
Query: 336 DQMQSRDLISWNVIIASYGIHGH--GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+++Q++D++SWN II Y HG + LF +M P+ TFA + +A S
Sbjct: 64 ERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVD 123
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
GR + + K+ + + ++++ +AG EA K+ D+M ++ W
Sbjct: 124 AAGGRLAHAVAI---KMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVS-WAT 179
Query: 452 LLSGCHNHK 460
++SG + K
Sbjct: 180 MISGYASQK 188
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 315/550 (57%), Gaps = 1/550 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M+K L S ++ +Y +I A +F+++ V ++N+II +
Sbjct: 209 MLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA 268
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L ++M RP+ T + ALKAC ++ ++G ++ +++ +D+F ++++
Sbjct: 269 LMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDM 328
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC M++A A++ M +KD++ W+++I+G G +AV + +M E ID ++ +
Sbjct: 329 YSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTL 388
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++++ A L + +H SI+ + D V SL+D Y K H+D AS +F+ +
Sbjct: 389 STVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTW 448
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V + ++I+ ++Q G L+L ++MQ +PD S L ACA + + GK +
Sbjct: 449 EDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQL 508
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + ++ F ++ S+++MY+KCG A F ++ +R ++SW+ +I Y HGHG
Sbjct: 509 HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHG 568
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+EAL LF QM+ V P+H T S+L A +H+GLV EG+ +F+ M + I+PT++HYAC
Sbjct: 569 KEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYAC 628
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
M+DLL R+G++ EA+++V+S+ E VW ALL HK +G+K AK + L P+
Sbjct: 629 MIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEK 688
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G H L++N +A WE VA VRK M+ S +KK PG S +E+ +++ FI+ D+SH++
Sbjct: 689 SGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRS 748
Query: 540 EDIVYVLKKL 549
++I L +L
Sbjct: 749 DEIYAKLDQL 758
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 251/481 (52%), Gaps = 6/481 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK S + ++ LY ARKL +E V +++S++ Y + E
Sbjct: 7 LIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEA 66
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++N+M V+ + TF LKAC DL MG ++ AV G+ +D FV ++++ +
Sbjct: 67 LLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVM 126
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++++ F + +++V W+++ + V + EAV +K M + GI +E +
Sbjct: 127 YAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSI 186
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ ACA L + G +HG ++ L+LD +LVDMY+K G ++ A VF++++
Sbjct: 187 SIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAH 246
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V+W A+I+G + L LL EM+ G P+ +L SAL ACA +GF +LG+ +
Sbjct: 247 PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQL 306
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ +L ++DMYSKC + AR +D M +D+I+WN +I+ Y G
Sbjct: 307 HSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDH 366
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+A+SLF +M + + +T +++L +++ ++ + + + K I
Sbjct: 367 LDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISI-KSGIYSDFYVINS 425
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
++D + ++EA KI + + E L + ++++ + ++ GE+ K L++ D
Sbjct: 426 LLDTYGKCNHIDEASKIFEERTWED-LVAYTSMITA---YSQYGDGEEALKLYLQMQDAD 481
Query: 480 L 480
+
Sbjct: 482 I 482
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 184/369 (49%), Gaps = 10/369 (2%)
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG 156
E+ ++ G+ D + + ++ LY KC + A ++ D+V WSS+++G V NG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
EA+ + M G+ +E +++AC+ D G VHG ++ D V
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
+LV MYAK G LD + +F + N+V+W AL S + Q+ L G + L EM G P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
+ S+ L ACA + LG+ IHG ++ D + +++DMYSK G A A+F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+ D++SWN IIA +H + AL L +M + +P+ T +S L A + G E
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 396 EGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
GR L S K+ +A +VD+ ++ +++A + DSM + +A W AL+
Sbjct: 302 LGR---QLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA-WNALI 357
Query: 454 SG---CHNH 459
SG C +H
Sbjct: 358 SGYSQCGDH 366
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 138/264 (52%), Gaps = 3/264 (1%)
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+ +H + I+ + D ++ LV +Y+K A + S +++V+W +L+SG+ QN
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLG 315
G L + EM G + + + S L AC+ L +G+ +HG V F+ + +
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++ MY+KCG+ +R LF + R+++SWN + + Y EA+ LF +M+ + +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
P+ + + +L+A + + GR LM+ K + + +VD+ ++AGE+E A+
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLML-KMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 436 IVDSMSTEPGLAVWVALLSGCHNH 459
+ ++ P + W A+++GC H
Sbjct: 240 VFQDIA-HPDVVSWNAIIAGCVLH 262
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 313/543 (57%), Gaps = 2/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP 74
++ +Y + A+ LF++ + ++N++I K FE L+ +M ++ED+
Sbjct: 175 LVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEV 234
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T L AC+ + L+ +E+ ++ G+ D V + + Y KCG + A F
Sbjct: 235 NEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVF 294
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M+ K + W+++I G NG PR+A++ Y +M G+ D + L+ A A L R
Sbjct: 295 YSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLR 354
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G VHG+ +R L +D + SL+ +Y G A +F M + V+W A+ISG++
Sbjct: 355 YGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYS 414
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLV 313
QNGL L L ++ S GF+P +++VS L AC+Q L+LGK H Y ++ ++
Sbjct: 415 QNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVF 474
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S IDMY+K G +R++FD ++++DL SWN IIA+YG+HG GEE++ LF +M +
Sbjct: 475 VACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVG 534
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD TF +L+ SH+GLVEEG +F+ M + + I+P +HYAC++D+L RAG +++A
Sbjct: 535 QMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDA 594
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L++V M +P VW +LLS C N + IG+ VA+K+L+L P ++ + +SN +A
Sbjct: 595 LRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGS 654
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W++V VR+ ++ G++K G S +E+ G++H+F+ D Q +++ +KL +M
Sbjct: 655 GRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKM 714
Query: 554 RAI 556
I
Sbjct: 715 CKI 717
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 270/523 (51%), Gaps = 33/523 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI--KEDVR 73
+IA+YG + +A K+F +P+R + ++NSII +S + + +M+ +E +
Sbjct: 72 LIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLL 131
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD +T L C +D++MG I AV+LG DV V +S++++Y KCG + EA +
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEVVMMGLIQACADLGD 192
F+K RK+ V W++MI GL G EA + ++ M+ +E I+ +EV ++ ++ AC ++
Sbjct: 192 FDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQ 251
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R +HGYSIR D V V YAK G L A VF +M + +W ALI G
Sbjct: 252 LRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGG 311
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
AQNG L L ++M G PD ++ S LLA A + L+ GK +HG+ +R + +
Sbjct: 312 CAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEID 371
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G S++ +Y CG S AR LFD M+ + +SWN +I+ Y +G E+AL LF +++
Sbjct: 372 SFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVS 431
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEV 430
+P S+L A S + G+ + ++ AC +D+ A++G +
Sbjct: 432 DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDV--FVACSTIDMYAKSGCI 489
Query: 431 EEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLN--PDD---LGIH 483
+E+ + D + + LA W A+++ G H + SI ++ +++ K+ PD +GI
Sbjct: 490 KESRSVFDGLKNKD-LASWNAIIAAYGVHGDGEESI--ELFERMRKVGQMPDGFTFIGIL 546
Query: 484 ALVS----------------NFFAMEQKWEEVAGVRKTMRKSG 510
+ S NF +E K E A V + ++G
Sbjct: 547 TVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAG 589
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 219/412 (53%), Gaps = 7/412 (1%)
Query: 49 IAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY 107
+A R E + + ++ ++I + + D+ TF +KAC +D +GE I +++G
Sbjct: 3 VAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGL 62
Query: 108 GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
DVFVG++++ +Y K G ++ A+ F M ++LV W+S+I+G NG ++ D
Sbjct: 63 LLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVE 122
Query: 168 M--KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
M +EG+ D ++ ++ CA D + G+ +HG +++ L+ DV+V SLVDMY+K
Sbjct: 123 MMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC 182
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSA 284
G+L A +F +R N V+W +I G G L EMQ E + V++++
Sbjct: 183 GYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNI 242
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L AC +I L+ K +HGY++R F ++ ++ + Y+KCG+ CA +F M+++ +
Sbjct: 243 LPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
SWN +I +G +AL+L++QM + + PD T SLL A +H + G+
Sbjct: 303 NSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGF 362
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ ++ ++ ++ L GE A + D M + ++ W A++SG
Sbjct: 363 VL-RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVS-WNAMISG 412
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
Query: 160 EAVDAY-KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
+A+D + K + +AD +I+AC D G +HG I+ L LDV V +L
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC--GFEP 276
+ MY K G +D A VF M N+V+W ++ISGF++NG + ++L+EM + G P
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLP 132
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALF 335
D +LV+ L CA+ +++G IHG V+ ++ + S++DMYSKCG + A+ LF
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDHSTFASLLSALSHSGLV 394
D+ ++ +SWN +I G+ EA +LF +M ++ ++ + T ++L A +
Sbjct: 193 DKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL 252
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ + ++ Q E V A+ G + A ++ SM T+ + W AL+
Sbjct: 253 RSLKELHGYSI-RHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT-VNSWNALIG 310
Query: 455 GC 456
GC
Sbjct: 311 GC 312
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/539 (34%), Positives = 301/539 (55%), Gaps = 1/539 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG I SA K+F E+P + ++ +N++I AY ++ L +Y QM V D
Sbjct: 282 LLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSD 341
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L + +G I + V+ + + + S++L +Y K G N A F
Sbjct: 342 SFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFS 401
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ +D+V W S+I+G N + +EA+D ++ M+ + + D +M +I AC L
Sbjct: 402 TMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDL 461
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G ++HG+ I+ L LDV V +SL+DMY+K G + A ++F +M N+V W ++IS + +
Sbjct: 462 GCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCR 521
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVL 314
N L ++ L ++ PDSVS S L A + + L GKS+HGY VR + F+L +
Sbjct: 522 NNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQV 581
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY KCG+ A+ +F+++ ++L++WN +I YG HG +A+ LF +M + +
Sbjct: 582 ENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGI 641
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF SLLS+ +HSGL+EEG + F++M K+ I+P +HY +VDL RAG + +A
Sbjct: 642 KPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAY 701
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
V +M EP ++W++LL C H +GE VA K+L + P + + N + +
Sbjct: 702 SFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAE 761
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
W+ A +R +M++ G+KK PG S +EV ++ F D S +I L L M
Sbjct: 762 LWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNM 820
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 251/480 (52%), Gaps = 38/480 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-------EDVRPDSSTFTV 81
AR LF++L R S I+A++ F GL+ ++ E+V+ SS+FT
Sbjct: 193 ARYLFKKLKDR------SNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTC 246
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
L AC + G+++ A+++G+ +D +V +S+L +Y KC + A F ++ K+
Sbjct: 247 TLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKE 306
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+ W+++I+ V NG +A+ YK+MK + +D ++ ++ + + G G +H
Sbjct: 307 IELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHT 366
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
++R L + +Q++L+ MY+K G + A+ +F M ++V WG++ISGF QN
Sbjct: 367 EIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKE 426
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
L+ M++ +PDS + S + AC + + LG +IHG+ ++ ++ + +S++D
Sbjct: 427 ALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLD 486
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MYSK G P A +F M ++L++WN II+ Y + + +++LF Q++ + PD +
Sbjct: 487 MYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVS 546
Query: 381 FASLLSALSHSGLVEEG--------RYW--FDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
F S+L+A+S + +G R W FDL V ++D+ + G +
Sbjct: 547 FTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVEN-----------TLIDMYIKCGLL 595
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
+ A I + +S E L W +++ G +H + S ++ ++ + PDD+ +L+S+
Sbjct: 596 KYAQHIFERIS-EKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSS 654
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 33/410 (8%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L LY K V T+ LKAC SL +L+ G+ I + G +D ++ SS++
Sbjct: 39 EALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLI 95
Query: 119 NLYVKCGKMNEAMVAFEKMQRK-----DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
N+YVKCG +A+ F+++ + D+ W+S+I+G GQ E + + RM+ G
Sbjct: 96 NIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY 155
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
+ G +H Y +R LN D ++T+L+D Y K G A +
Sbjct: 156 --------------------KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARY 195
Query: 234 VFKNM-SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
+FK + R NIV W +I GF +NGL ++LE + ++ + S S L AC Q
Sbjct: 196 LFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGE 255
Query: 293 FLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
F+ GK +H ++ F+ + + TS++ MY KC + A +F+++ +++ WN +I+
Sbjct: 256 FVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALIS 315
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
+Y +G+ +AL ++ QM V D T ++L++ S +GL + GR +V K +Q
Sbjct: 316 AYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIV-KRPLQ 374
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHK 460
+ + ++ + ++ G+ A I +M E + W +++SG C N K
Sbjct: 375 SSITIQSALLTMYSKFGDSNYANSIFSTMK-ERDVVAWGSVISGFCQNRK 423
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 215/467 (46%), Gaps = 30/467 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDT-----YNSIIIAYSRKE 55
+I T L + +I +Y A K+F++LP GV +NSII Y R
Sbjct: 79 IITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFR-- 136
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGS 115
G + + + R SS + K G++I V D F+ +
Sbjct: 137 -----FGQLEEGMVQFGRMQSSGY-------------KEGKQIHSYIVRNMLNFDPFLET 178
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
++++ Y KCG+ EA F+K++ R ++V W+ MI G NG +++ Y K E +
Sbjct: 179 ALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVK 238
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ AC FG VH +I+ D V TSL+ MY K ++ A V
Sbjct: 239 VVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKV 298
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F + I W ALIS + NG A L + +M+ C DS ++++ L + + G
Sbjct: 299 FNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLY 358
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LG+ IH V+R ++ + ++++ MYSK G + A ++F M+ RD+++W +I+ +
Sbjct: 359 DLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGF 418
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+ +EAL F M +VKPD AS++SA + V+ G ++ K +Q
Sbjct: 419 CQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVI-KSGLQLD 477
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNH 459
+ ++D+ ++ G E A I M + L W +++S C N+
Sbjct: 478 VFVASSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIISCYCRNN 523
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 303/539 (56%), Gaps = 1/539 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + A+++F LP + YN+II+ R E FE L + ++K + + +
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+ A AC S+ G ++ +V+ +++ V +S+L++Y KC ++EA F++M+
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
R+D V W+++I NG E ++ + M + ++ D+ +++AC+ G+
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I+ L LD V +L+DMY K G ++ A + + + +V+W A+I+GF
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
+ EM +PD+ + L ACA + + LGK IHG ++ ++ + ++
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITST 620
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMYSKCG + +F++ ++D ++WN +I Y HG GEEAL F +M V+P+
Sbjct: 621 LVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPN 680
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
H+TF S+L A +H G +++G ++F+ M+++Y ++P +HY+CM+D++ R+G + EALK++
Sbjct: 681 HATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLI 740
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
M E +W LLS C H I EK +L+L P+D L+SN +A W
Sbjct: 741 QEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWG 800
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+V+ +RK MR + +KK PG S +EV E+HAF++ +K+H +YE+I +L L EM+ I
Sbjct: 801 KVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWI 859
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 238/446 (53%), Gaps = 4/446 (0%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-E 70
S +I+ Y ++ A + F + P R V ++NS++ + + + + ++ M + E
Sbjct: 111 SYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSE 170
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+V D +TF V LKAC L D +G ++ V +G+ DV GS++L++Y KC +++++
Sbjct: 171 EVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDS 230
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
+ F ++ K+ VCWS++I G V N + ++ +K M+K GI + + + ++CA L
Sbjct: 231 LKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGL 290
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ G +H ++++ D+ V T+ +DMYAK G L A +F ++ + ++ + A+I
Sbjct: 291 SALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAII 350
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G +N L+ + G + +SL A ACA I G+ +H +V+
Sbjct: 351 VGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLR 410
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N+ + S++DMY KC S A +FD+M+ RD +SWN +IA++ +G+ EE L+LF M
Sbjct: 411 SNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASM 470
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ ++PD T+ S+L A S + G + ++ K + ++D+ + G
Sbjct: 471 LRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRII-KSGLGLDSFVGGALIDMYCKCGM 529
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
+EEA KI D + + + W A+++G
Sbjct: 530 IEEAKKIHDRIEQQT-MVSWNAIIAG 554
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 230/445 (51%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + + K+F E+P++ +++II + + L L+ +M K +
Sbjct: 217 LLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVS 276
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + ++C L LK+G ++ A++ +G+D+ VG++ L++Y KCG + +A F
Sbjct: 277 QSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFN 336
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + L C++++I G V N + EA+ ++ + K G+ +E+ + G ACA +
Sbjct: 337 SLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD 396
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H S++ L ++ V S++DMY K L A +F M R + V+W A+I+ Q
Sbjct: 397 GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQ 456
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG TL L M EPD + S L AC+ L G IH ++ + +
Sbjct: 457 NGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFV 516
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++IDMY KCG+ A+ + D+++ + ++SWN IIA + + H E+A S F +M++ V
Sbjct: 517 GGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSV 576
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD+ T+A +L A ++ V G+ ++ K ++ + +VD+ ++ G ++++
Sbjct: 577 KPDNFTYAIVLDACANLASVGLGKQIHGQII-KLELHSDVYITSTLVDMYSKCGNMQDS- 634
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
+V + W A++ G H
Sbjct: 635 ALVFEKAPNKDFVTWNAMICGYAQH 659
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 201/395 (50%), Gaps = 15/395 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+ L + I+ +YG + A +F+E+ R ++N++I A+ + + E L
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETL 464
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M++ + PD T+ LKAC S L G EI + ++ G G D FVG +++++Y
Sbjct: 465 NLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMY 524
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + EA ++++++ +V W+++I G +A + M K + D
Sbjct: 525 CKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYA 584
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA+L G +HG I+ L+ DV + ++LVDMY+K G++ ++ VF+
Sbjct: 585 IVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNK 644
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ VTW A+I G+AQ+GL L MQ P+ + VS L ACA +GF+ K +H
Sbjct: 645 DFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFID--KGLH 702
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ ++ L + +ID+ + G S A L +M D + W +++ IH
Sbjct: 703 YFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIH 762
Query: 357 GH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
G+ E+A + LQ+ +P+ S+ LLS +
Sbjct: 763 GNIEIAEKATNAILQL-----EPEDSSACILLSNI 792
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/529 (23%), Positives = 230/529 (43%), Gaps = 77/529 (14%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF+ ++ C LK G++ + + G+ DV++ + ++ +Y++C +N A FEKM
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 138 Q-------------------------------RKDLVCWSSMINGLVFNGQPREAVDAYK 166
++D+V W+SM++G + NG+ R+++D +
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 167 RM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
M + E + D+ +++AC+ L D G+ VHG +R DV ++L+DMYAK
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
LD + +F + N V W A+I+G QN LEL EMQ G S
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284
Query: 286 LACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
+CA + LK+G +H + ++ F ++ +GT+ +DMY+KCG + A+ +F+ + L
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
+N II + G EAL F ++++ + + + + SA + +GR L
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404
Query: 405 VSK---------------YKIQPTEKHYACMVDLLARA---------------GEVEEAL 434
V Y CM D + R G EE L
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETL 464
Query: 435 KIVDSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS---- 487
+ SM EP + ++L C + + + G ++ +++K LG+ + V
Sbjct: 465 NLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK---SGLGLDSFVGGALI 521
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKK----VPGYSVVEVNGELHAFIME 532
+ + EE + + + M + G+++++ + + H+F E
Sbjct: 522 DMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYE 570
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 136/253 (53%), Gaps = 2/253 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ L G +I +Y I A+K+ + + + + ++N+II ++ + +
Sbjct: 505 IIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDA 564
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +M+K V+PD+ T+ + L AC +L + +G++I + ++L +DV++ S+++++
Sbjct: 565 HSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDM 624
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M ++ + FEK KD V W++MI G +G EA+ ++RM+ E + +
Sbjct: 625 YSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATF 684
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ +++ACA +G GL + + L ++ + ++D+ ++G + A + + M
Sbjct: 685 VSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMP 744
Query: 240 -RINIVTWGALIS 251
+ V W L+S
Sbjct: 745 FEADAVIWRTLLS 757
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 307/529 (58%), Gaps = 23/529 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SA +LF++L R V ++NS+I Y LG+Y QM+ + D +T L C
Sbjct: 203 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L +G+ + A++ + + +++L++Y KCG ++ A+ FEKM +++V W+S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G +G A+ ++M+KEG+ D V + ++ ACA G G VH Y +
Sbjct: 323 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ ++ V +L+DMYAK G ++ A+ VF M +I++W ++ EL
Sbjct: 383 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------EL-- 428
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+PDS ++ L ACA + L+ GK IHGY +R + + + +++D+Y KCG
Sbjct: 429 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
V AR LFD + S+DL+SW V+IA YG+HG+G EA++ F +M + ++PD +F S+L
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSGL+E+G +F +M + + I+P +HYACMVDLL+R G + +A K ++++ P
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 601
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL GC + + EKVA++V +L P++ G + L++N +A +K EEV +R+ +
Sbjct: 602 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKI 661
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIM-EDKSHNQYEDIVYVLKKLYLEMR 554
K G++K PG S +E+ G ++ F+ + SH + I +LKK+ +M+
Sbjct: 662 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 227/522 (43%), Gaps = 88/522 (16%)
Query: 37 PLRGVD----TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
P R +D YN+ I+ + + + L K ++ ++ T+ L+ C L L
Sbjct: 58 PTRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSEL--ETKTYGSVLQLCAGLKSL 115
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK------------ 140
G+++ G D +G +++ Y CG + E F+ M++K
Sbjct: 116 TDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEY 175
Query: 141 ---------------------------------------DLVCWSSMINGLVFNGQPREA 161
D++ W+SMI+G V NG
Sbjct: 176 AKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERG 235
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
+ YK+M GID D ++ ++ CA+ G G +VH +I+ + +L+DM
Sbjct: 236 LGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM 295
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y+K G LD A VF+ M N+V+W ++I+G+ ++G + + LL +M+ G + D V++
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAI 355
Query: 282 VSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
S L ACA+ G L GK +H Y NL + +++DMY+KCG A ++F M
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV 415
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+D+ISWN ++ GE +KPD T A +L A + +E G+
Sbjct: 416 KDIISWNTMV--------GE-------------LKPDSRTMACILPACASLSALERGKEI 454
Query: 401 FDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCH 457
++ +++H A +VDL + G + A + D M L W +++ G H
Sbjct: 455 HGYILRNG--YSSDRHVANALVDLYVKCGVLGLARLLFD-MIPSKDLVSWTVMIAGYGMH 511
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQKW 496
+ +I + + PD++ +++ S+ +EQ W
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 183/392 (46%), Gaps = 30/392 (7%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK++ N ++ +Y D+ A ++FE++ R V ++ S+I Y+R +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 337
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L QM KE V+ D T L AC L G+++ +++FV ++++++Y
Sbjct: 338 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 397
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M A F M KD++ W++M+ L +P D M
Sbjct: 398 AKCGSMEGANSVFSTMVVKDIISWNTMVGEL----KP-----------------DSRTMA 436
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA L G +HGY +R + D V +LVD+Y K G L LA +F +
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W +I+G+ +G + EM+ G EPD VS +S L AC+ G L+ G
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF- 555
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ + + DFN+ ++D+ S+ G S A + + + D W ++ I+
Sbjct: 556 -FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
E A + ++ E ++P+++ + LL+ +
Sbjct: 615 HDIELAEKVAERVFE--LEPENTGYYVLLANI 644
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 306/586 (52%), Gaps = 47/586 (8%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF +P R T+NS++ +++ + E L + M KE + TF L AC
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSG 164
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D+ G +I + +DV++GS+++++Y KCG +N+A F++M +++V W+S+
Sbjct: 165 LNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSL 224
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR-RH 207
I NG EA+ ++ M + ++ DEV + +I ACA L + G VH ++
Sbjct: 225 ITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDK 284
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNM----------------------------- 238
L D+ + + VDMYAK + A +F +M
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFT 344
Query: 239 --SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+ N+V+W ALI+G+ QNG L L ++ P + + L ACA + L L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHL 404
Query: 297 GKSIHGYTVRR-FDF------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
G H + ++ F F ++ +G S+IDMY KCG +F +M RD +SWN +
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I + +G+G EAL LF +M+++ KPDH T +LSA H+G VEEGR++F M +
Sbjct: 465 IIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ P HY CMVDLL RAG +EEA I++ M +P +W +LL+ C H+ ++G+ VA
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVA 584
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+ ++ + G + L+SN +A KW + VRK MRK G+ K PG S +++ G H F
Sbjct: 585 EKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVF 644
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEHEEHDPLST 575
+++DKSH + + I +L L EMR ++H E LS+
Sbjct: 645 MVKDKSHPRKKQIHSLLDILIAEMR--------QKQDHAETGSLSS 682
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 210/453 (46%), Gaps = 77/453 (16%)
Query: 76 SSTFTVALKACVSL----MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
SS F L +C+ L +D++ + ++ G+ N+VF+ + +++ Y KCG + +
Sbjct: 19 SSPFAKLLDSCIKLKLSAIDVRC---VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGR 75
Query: 132 VAFEKMQRKDLVCWSSMINGL-----------VFNGQPR--------------------E 160
F+KM ++++ W+S++ GL +F P E
Sbjct: 76 QLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ + M KEG +E + AC+ L D G+ +H + DV + ++LVD
Sbjct: 136 ALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVD 195
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY+K G+++ A VF M N+V+W +LI+ + QNG A L++ M EPD V+
Sbjct: 196 MYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVT 255
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKC-----------GV 327
L S + ACA + +K+G+ +H V+ + +++L + +DMY+KC +
Sbjct: 256 LASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 328 P--------------------SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
P AR +F +M R+++SWN +IA Y +G EEALSLF
Sbjct: 316 PIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHY----ACMVD 422
+ V P H TFA++L A + + G + ++ +K Q E+ ++D
Sbjct: 376 LLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + G VEE + M E W A++ G
Sbjct: 436 MYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 189/382 (49%), Gaps = 41/382 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ A+++F+E+ R V ++NS+I Y + E L ++ M++ V PD
Sbjct: 193 LVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPD 252
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEA---- 130
T + AC SL +K+G+E+ + V++ ND+ + ++ +++Y KC ++ EA
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 131 -------------MVA--------------FEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
MV+ F KM +++V W+++I G NG+ EA+
Sbjct: 313 DSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV------HGYSIRRHLNLDVKVQTS 217
+ +K+E + +++ACADL D G+ HG+ + D+ V S
Sbjct: 373 LFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMY K G ++ VF+ M + V+W A+I GFAQNG LEL EM G +PD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPD 492
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALF 335
++++ L AC GF++ G+ R F + T ++D+ + G A+++
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSII 552
Query: 336 DQMQSR-DLISWNVIIASYGIH 356
++M + D + W ++A+ +H
Sbjct: 553 EEMPVQPDSVIWGSLLAACKVH 574
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 321/620 (51%), Gaps = 79/620 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+IA Y D+ +RK+F + PL D+ YN++I AYS + L+ M +++ R
Sbjct: 85 LIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFR 144
Query: 74 PDSSTFTVALKACVSLMDL-KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK------ 126
PD+ TFT L A + + K +++ V+ G G V +++++ YVKC
Sbjct: 145 PDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQS 204
Query: 127 ---MNEAMVAFEKMQRKDLVCWSSMINGLV-----------FNGQPR------------- 159
M EA F++M +D + W+++I G V NG +
Sbjct: 205 SSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGY 264
Query: 160 -------EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN--- 209
EA + +++M I DE +I CA+ G R G +H Y ++ N
Sbjct: 265 AHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAP 324
Query: 210 -LDVKVQTSLVDMYAKTGHLDLASHVFKNMSR---------------------------- 240
+ + V +L+ Y K G +D+A +F M
Sbjct: 325 DVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNE 384
Query: 241 ---INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
NI++W +ISG AQ G A L+ M+ GFEP + A+++C+ +G LK G
Sbjct: 385 MPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHG 444
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +H VR ++ +L G ++I MY++CGV A LF M D ISWN +IA+ G H
Sbjct: 445 RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQH 504
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G G +A+ LF +M++ + PD +F +++SA SH+GLV+EGR +FD M + Y + P E+H
Sbjct: 505 GQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEH 564
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YA ++DLL RAG+ EA ++++SM EPG +W ALL+GC H +G + A+++ +L
Sbjct: 565 YARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELK 624
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P G + L+SN +A+ +W ++A VRK MR G+KK PG S +EV ++H+F++ D +H
Sbjct: 625 PQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANH 684
Query: 537 NQYEDIVYVLKKLYLEMRAI 556
+ I L++L LEMR I
Sbjct: 685 PEVRQIYNYLEQLVLEMRKI 704
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 173/419 (41%), Gaps = 56/419 (13%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI + G+ + R+I +Y + + AR LF+E+P + ++I AYS
Sbjct: 39 MIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS-------- 90
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ DLK+ +I+ LG + VF ++M+
Sbjct: 91 ---------------------------AAGDLKLSRKIFSD-TPLGMRDSVFY-NAMITA 121
Query: 121 YVKCGKMNEAMVAFEKMQR----KDLVCWSSMINGLVFNGQP-REAVDAYKRMKKEGIDA 175
Y + A+ F MQR D ++S++ L + + + + K G
Sbjct: 122 YSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGF 181
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-----NLDVKVQTSLVDMYAKTGHLDL 230
V+ LI + S S + R L N D T+++ Y K LD
Sbjct: 182 VTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDA 241
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A S+ V W A+ISG+A GL E+ +M + D + S + CA
Sbjct: 242 AKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCAN 301
Query: 291 IGFLKLGKSIHGYTVRRF-----DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
G +LGK +H Y ++ D + + ++I Y KCG A+ +F++M RDL+S
Sbjct: 302 AGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVS 361
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
WN+I++ Y +EA S F +M E + ++ ++S L+ G EE +F+ M
Sbjct: 362 WNIILSGYVNVRCMDEAKSFFNEMPEKNIL----SWIIMISGLAQIGFAEEALKFFNRM 416
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+++LSA GN+ +I +Y + +A LF +P ++N++I A + + +
Sbjct: 457 ESSLSA-GNA---LITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIE 512
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLY 121
L+ +M+KE + PD +F + AC +K G + + + G D + +++L
Sbjct: 513 LFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLL 572
Query: 122 VKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+ GK +EA E M W +++ G +G ++A +R+
Sbjct: 573 CRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERL 620
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 317/577 (54%), Gaps = 8/577 (1%)
Query: 8 AYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
AY + +G + +Y + + A K+F LP +YN+II+ Y+R++ + L ++
Sbjct: 271 AYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQS 330
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ + + D + + AL AC + G ++ AV+ G G ++ V +++L++Y KCG
Sbjct: 331 LQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGA 390
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ EA F+ M+R+D V W+++I N + + + + M + ++ D+ +++A
Sbjct: 391 LVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA +G+ +HG ++ + LD V ++LVDMY K G L A + + V+W
Sbjct: 451 CAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSW 510
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++ISGF+ + + +M G PD+ + + L CA + ++LGK IH ++
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILK 570
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
++ + ++++DMYSKCG +R +F++ RD ++W+ +I +Y HGHGE+A+ L
Sbjct: 571 LNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKL 630
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M VKP+H+ F S+L A +H G V++G ++F +M S Y + P +HY+CMVDLL
Sbjct: 631 FEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLG 690
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
R+ +V EALK+++SM E +W LLS C + EK +L+L+P D + L
Sbjct: 691 RSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVL 750
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
++N +A W EVA +R M+ +KK PG S +EV E+H F++ DK+H + E+I
Sbjct: 751 LANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQ 810
Query: 546 LKKLYLEMR------AISSWLQGHMEEHEEHDPLSTA 576
L EM+ I S L +EE + ++ L T
Sbjct: 811 THLLVDEMKWAGYVPDIDSMLDEEVEEQDPYEGLKTT 847
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 240/466 (51%), Gaps = 27/466 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A+ LF+ +P R V ++NS++ Y + + ++ +M + D +TF+V LKAC
Sbjct: 91 AQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSG 150
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ D +G ++ A+++G+ NDV GS+++++Y KC K++ A F +M ++LVCWS++
Sbjct: 151 IEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAV 210
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G V N + E + +K M K G+ + + ++CA L + G +HG++++
Sbjct: 211 IAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDF 270
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D + T+ +DMYAK + A VF + ++ A+I G+A+ LE+
Sbjct: 271 AYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQS 330
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
+Q D +SL AL AC+ I G +HG V+ FN+ + +++DMY KCG
Sbjct: 331 LQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGA 390
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +FD M+ RD +SWN IIA++ + + LSLF+ M+ + ++PD T+ S++ A
Sbjct: 391 LVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 388 LS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ H +V+ G D V + +VD+ + G + EA KI
Sbjct: 451 CAGQQALNYGMEIHGRIVKSGM-GLDWFVG-----------SALVDMYGKCGMLMEAEKI 498
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
D + E W +++SG + K+ ++ ++L++ PD+
Sbjct: 499 HDRLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 236/466 (50%), Gaps = 5/466 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A ++F E+P R + ++++I Y + + E L L+ M+K +
Sbjct: 179 LVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST+ ++C L K+G ++ A++ + D +G++ L++Y KC +M++A F
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFN 298
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++++I G Q +A++ ++ +++ + DE+ + G + AC+ +
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE 358
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +HG +++ L ++ V +++DMY K G L A +F +M R + V+W A+I+ Q
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQ 418
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N TL L + M EPD + S + ACA L G IHG V+ + +
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFV 478
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY KCG+ A + D+++ + +SWN II+ + E A F QM+E V
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGV 538
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD+ T+A++L ++ +E G+ + K + + +VD+ ++ G ++++
Sbjct: 539 IPDNFTYATVLDVCANMATIELGKQ-IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS- 596
Query: 435 KIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPD 478
+++ + + W A++ H H + +I ++L + P+
Sbjct: 597 RLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPN 642
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 231/510 (45%), Gaps = 59/510 (11%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF+ L+ C +L L G++ + + + ++V + ++ Y K MN A F++M
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 138 QRKDLVCWSSMINGL-------------------------------VFNGQPREAVDAYK 166
+D++ W++MI G + NG R++++ +
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
RM+ I D +++AC+ + D GL VH +I+ DV ++LVDMY+K
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
LD A +F+ M N+V W A+I+G+ QN L+L +M G + S
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+CA + KLG +HG+ ++ F ++ ++GT+ +DMY+KC S A +F+ + + S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS----H------SGLVE 395
+N II Y G +AL +F + T + D + + L+A S H GL
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAV 367
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ F++ V+ ++D+ + G + EA I D M ++ W A+++
Sbjct: 368 KCGLGFNICVAN-----------TILDMYGKCGALVEACTIFDDMERRDAVS-WNAIIAA 415
Query: 456 CHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-- 511
+++ + +L+ + PDD ++V A +Q + + KSGM
Sbjct: 416 HEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA-CAGQQALNYGMEIHGRIVKSGMGL 474
Query: 512 KKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
G ++V++ G+ + +K H++ E+
Sbjct: 475 DWFVGSALVDMYGKCGMLMEAEKIHDRLEE 504
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K NL + ++ +Y ++ +R +FE+ P R T++++I AY+ +
Sbjct: 568 ILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQA 627
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
+ L+ +M +V+P+ + F L+AC + + G + + ++ YG D + S M+
Sbjct: 628 IKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYF-QIMQSHYGLDPHMEHYSCMV 686
Query: 119 NLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+L + ++NEA+ E M D V W ++++ G A A+ +
Sbjct: 687 DLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSL 737
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 303/562 (53%), Gaps = 39/562 (6%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF +P + ++NS+I +++ + E L + +M ++D + +F L AC L D
Sbjct: 112 LFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKD 171
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
LK+G +I + Y DVF+GS +++ Y KCG + A F+ M+ K++V W+ +I
Sbjct: 172 LKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITC 231
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNL 210
NG EA++A+ RM + G DEV + ++ ACA L + G+ +H ++
Sbjct: 232 YEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRN 291
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN---------------------------- 242
D+ + +LVDMYAK G ++ A VF M N
Sbjct: 292 DLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIK 351
Query: 243 ---IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
IV+W ALI+G+ QNG L L ++ P + + L A A + L+LG+
Sbjct: 352 QKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQ 411
Query: 300 IHGYTVRR-FDF------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
H + V+ F F ++ +G S+IDMY KCG +F+ M +D +SWN +I
Sbjct: 412 AHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIG 471
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y +G+G EAL LF +M+E+ KPDH T L A SH+GLVEEGR +F M ++ + P
Sbjct: 472 YAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLP 531
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+ HY CMVDLL RAG +EEA +++SM +P VW +LLS C H+ ++G+ VA+K+
Sbjct: 532 VKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKI 591
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+++P G + L++N ++ +W + VRK MR+ G+ K PG S +++ +H F+++
Sbjct: 592 FEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVK 651
Query: 533 DKSHNQYEDIVYVLKKLYLEMR 554
DK H Q ++I +LK L MR
Sbjct: 652 DKRHPQKKEIYSILKLLTKHMR 673
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 210/450 (46%), Gaps = 70/450 (15%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DSS F L CV L + + + ++ + +VF+ + ++++Y KCG ++ A F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 135 EKMQR-------------------------------KDLVCWSSMINGLVFNGQPREAVD 163
++M KD W+SMI G + + EA+D
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ RM ++ ++ + AC+ L D + G +HG + +LDV + + L+D Y+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G + A VF M N+V+W LI+ + QNG A LE M GF+PD V+L S
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 284 ALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM--- 338
+ ACA + K G IH V+ +F +L+LG +++DMY+KCG + AR +FD+M
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322
Query: 339 ----------------------------QSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +D++SWN +IA Y +G EEAL LF +
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHY----ACMVDLLA 425
V P H TF +LL+A ++ +E GR +V ++ Q E+ ++D+
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G VEE L++ ++M E W ++ G
Sbjct: 443 KCGSVEEGLRVFENM-VEKDHVSWNTMIIG 471
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 220/490 (44%), Gaps = 88/490 (17%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + AR++F+ + + V ++N +I Y + E L + +M + +PD
Sbjct: 197 LIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPD 256
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + AC +L K G +I + V+ + ND+ +G++++++Y KCG++NEA F
Sbjct: 257 EVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVF 316
Query: 135 EKM-------------------------------QRKDLVCWSSMINGLVFNGQPREAVD 163
++M ++KD+V W+++I G NG+ EA+
Sbjct: 317 DRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALG 376
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL------DVKVQTS 217
++ +K+E + L+ A A+L D G H + ++ D+ V S
Sbjct: 377 LFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNS 436
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMY K G ++ VF+NM + V+W +I G+AQNG LEL +M G +PD
Sbjct: 437 LIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPD 496
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVI---DMYSKCGVPSCARAL 334
V+++ L AC+ G ++ G RR+ F++ ++ D Y+ C V RA
Sbjct: 497 HVTMIGTLCACSHAGLVEEG--------RRYFFSMTKEHGLLPVKDHYT-CMVDLLGRA- 546
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK-PDHSTFASLLSALSHSGL 393
G EEA L IE+M K PD ++SLLSA
Sbjct: 547 ----------------------GCLEEAKDL----IESMPKQPDAVVWSSLLSACKVHRN 580
Query: 394 VEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGEVEEALKIVDSMS-----TEPGLA 447
+ G+Y + + ++I PT Y + ++ + G +A+ + M +PG +
Sbjct: 581 ITLGKYVAEKI---FEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCS 637
Query: 448 VWVALLSGCH 457
W+ + S H
Sbjct: 638 -WIDIQSNVH 646
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 295/531 (55%), Gaps = 6/531 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL--YNQMIKEDVRPDSSTFTVALKAC 86
AR+L ++ + ++S++ +S + + L Y QM + V P TF LKA
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L D + ++ G+ +D+FV +S+++ Y CG F+ + KD+V W+
Sbjct: 115 FKLRDAN-PFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G V N EA+ + MK+ G+ A+E+ ++ +++A D RFG S+HG+ +
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEA 233
Query: 207 -HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ DV + +SLVDMY K G D A VF M N+VTW ALI+G+ Q + +
Sbjct: 234 GRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFV 293
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EM P+ +L S L ACA +G L G+ +H Y ++ + N +GT++ID Y+K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAK 353
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F++++ +++ +W +I + HG+ A+ LF M+ + V P+ TF +
Sbjct: 354 CGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVV 413
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA +H GLVEEGR F M ++ ++P HYACMVDL R G +EEA +++ M EP
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
AVW AL C HK + +G+ A +V+KL P G + L++N ++ Q W++VA VRK
Sbjct: 474 TNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRK 533
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVYVLKKLYLEMR 554
M+ + K PG S +EV G+LH FI +DK + +D+ L + ++MR
Sbjct: 534 QMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTLDNVGVQMR 584
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 122/238 (51%), Gaps = 4/238 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG A+K+F+E+P R V T+ ++I Y + + + ++ +M+K DV P+
Sbjct: 246 LVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPN 305
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC + L G + ++ + VG+++++ Y KCG + EA++ FE
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFE 365
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ K++ W++MING +G AVD + M + +EV + ++ ACA G
Sbjct: 366 RLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEE 425
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G + S++ NL+ K +VD++ + G L+ A + + M WGAL
Sbjct: 426 GRRLF-LSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALF 482
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 304/560 (54%), Gaps = 34/560 (6%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
GK D+ RKLF+ + R V ++ S+I YS ++ E + L+ QM + V P+ T
Sbjct: 179 GKVDL--GRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVC 236
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
+ AC L DL++G+++ ELG + ++++++Y+KCG + A F++ K+
Sbjct: 237 VISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKN 296
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
LV ++++++ V + + + M ++G D+V M+ I ACA LGD G S H
Sbjct: 297 LVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHA 356
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG---- 257
Y +R L + +++DMY K G + A VF++M +VTW +LI+G ++G
Sbjct: 357 YVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMEL 416
Query: 258 ---------------------------LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+ +EL EMQ+ G D V++V AC
Sbjct: 417 AWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGY 476
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+G L L K + Y + +L LGT+++DM+S+CG PS A +F +M+ RD+ +W
Sbjct: 477 LGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAA 536
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I + G+ E A+ LF +M+E VKPD F +LL+A SH G V++GR F M +
Sbjct: 537 IGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHG 596
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
I+P HY CMVDLL RAG +EEA+ ++ SM EP VW +LL+ C HK + A
Sbjct: 597 IRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAA 656
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+ +L P+ +GIH L+SN +A KW +VA VR M++ G++KVPG S +EV G +H F
Sbjct: 657 EKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEF 716
Query: 530 IMEDKSHNQYEDIVYVLKKL 549
D+SH + I +L+++
Sbjct: 717 TSGDESHAENTHIGLMLEEI 736
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 227/478 (47%), Gaps = 36/478 (7%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
YN +I Y+ + + LY QM+ + PD TF L AC ++ L G ++ +
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
++G D+FV +S+++ Y +CGK++ F+ M +++V W+S+ING +EAV
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ +M + G++ + V M+ +I ACA L D G V Y + L + +LVDMY
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYM 277
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G + A +F + N+V + ++S + + A L +L EM G PD V+++S
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG-----------VPS-- 329
+ ACAQ+G L +GKS H Y +R + + ++IDMY KCG +P+
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT 397
Query: 330 ------------------CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
A +FD+M RDL+SWN +I + EEA+ LF +M
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ D T + SA + G ++ + W + K I + +VD+ +R G+
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAK-WVCTYIEKNDIHVDLQLGTALVDMFSRCGDPS 516
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
A+ + M ++ W A + ++ ++L K+ PDD+ AL++
Sbjct: 517 SAMHVFKRMEKRD-VSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLT 573
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 211/445 (47%), Gaps = 59/445 (13%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ +Y DI +AR++F+E + + YN+I+ Y E +VL + ++M+++
Sbjct: 269 VNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGP 328
Query: 73 RPDSSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
RPD T + AC L DL +G+ + R +E G+ N + ++++++Y+KCGK
Sbjct: 329 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLE-GWDN---ISNAIIDMYMKCGKRE 384
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQP------------------------------ 158
A FE M K +V W+S+I GLV +G
Sbjct: 385 AACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSM 444
Query: 159 -REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA++ ++ M+ +GI D V M+G+ AC LG V Y + +++D+++ T+
Sbjct: 445 FEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTA 504
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
LVDM+++ G A HVFK M + ++ W A I A G +EL EM +PD
Sbjct: 505 LVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPD 564
Query: 278 SVSLVSALLACAQIGFLKLGKSI-----HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCAR 332
V V+ L AC+ G + G+ + + +R ++V ++D+ + G+ A
Sbjct: 565 DVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRP---HIVHYGCMVDLLGRAGLLEEAV 621
Query: 333 ALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
L M + D++ W ++A+ H + E L+ + T + P+ LLS +
Sbjct: 622 DLIQSMPIEPNDVV-WGSLLAACRKHKNVE--LAHYAAEKLTQLAPERVGIHVLLSNIYA 678
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEK 415
S G+ W D V++ ++Q EK
Sbjct: 679 SA----GK-WTD--VARVRLQMKEK 696
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 164/315 (52%), Gaps = 3/315 (0%)
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
L ++ +I G G +A+ Y +M GI D+ L+ AC+ + G+ VHG
Sbjct: 95 LFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHG 154
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
++ L D+ V SL+ YA+ G +DL +F M N+V+W +LI+G++ L+
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKE 214
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
+ L +M G EP+ V++V + ACA++ L+LGK + Y + + ++ +++D
Sbjct: 215 AVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVD 274
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY KCG AR +FD+ +++L+ +N I+++Y H + L + +M++ +PD T
Sbjct: 275 MYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVT 334
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S ++A + G + G+ V + ++ + ++D+ + G+ E A K+ + M
Sbjct: 335 MLSTIAACAQLGDLSVGKS-SHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393
Query: 441 STEPGLAVWVALLSG 455
+ + W +L++G
Sbjct: 394 PNKT-VVTWNSLIAG 407
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 9/238 (3%)
Query: 228 LDLASHVFK----NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
LD A + F NM+ ++ + LI G+A GL + L ++M G PD +
Sbjct: 78 LDYARNAFGDDDGNMA--SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPF 135
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC++I L G +HG ++ + ++ + S+I Y++CG R LFD M R+
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN 195
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SW +I Y +EA+SLF QM E V+P+ T ++SA + +E G+
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCS 255
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
+S+ ++ + +VD+ + G++ A +I D + + L ++ ++S +H+
Sbjct: 256 Y-ISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANK-NLVMYNTIMSNYVHHE 311
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR------- 53
+++ L + N II +Y +A K+FE +P + V T+NS+I R
Sbjct: 358 VLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELA 417
Query: 54 -----------------------KESPF-EVLGLYNQMIKEDVRPDSSTFTVALKACVSL 89
+ S F E + L+ +M + + D T AC L
Sbjct: 418 WRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYL 477
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
L + + + + D+ +G+++++++ +CG + AM F++M+++D+ W++ I
Sbjct: 478 GALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAI 537
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DLGDSRFGLSVHGYSI 204
+ G A++ + M ++ + D+VV + L+ AC+ D G F + I
Sbjct: 538 GVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGI 597
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
R H + +VD+ + G L+ A + ++M N V WG+L++
Sbjct: 598 RPH----IVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 317/557 (56%), Gaps = 30/557 (5%)
Query: 1 MIKTNLSAYGNSVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
MI+T S+G +++++Y +V AR++F+E+P++ V ++ ++I AY+R E E
Sbjct: 90 MIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQE 149
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
LG + +M ++P+ TF L AC DL++ E + V+ G+ ++VFVG+ +++
Sbjct: 150 ALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVD 206
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G + A F+KM ++D+V W++MI G V NG +A+ ++ + K + +
Sbjct: 207 MYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTM 266
Query: 180 MMGLIQACADLGDS-------------RFGLSVHGY----SIRRHLNL-------DVKVQ 215
M G Q C D+ ++ + + GY S++ L +V
Sbjct: 267 MAGYAQ-CGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISW 325
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+++ +A+ G ++ A +FK M N+V+W A+I+G++QNG A + L+L +MQ +
Sbjct: 326 NAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMK 385
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
P++ + L ACA + L+ G H +R F ++++G +++ MY+KCG AR +
Sbjct: 386 PNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKV 445
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
FD+M+ +D S + +I Y I+G +E+L LF QM T +KPD TF +LSA H+GLV
Sbjct: 446 FDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLV 505
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+EGR +FD+M Y I P +HY CM+DLL RAG +EA +++ M +P +W +LLS
Sbjct: 506 DEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLS 565
Query: 455 GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKV 514
C H +GEKVA+ ++ LNP + + L+SN +A +W+++ VR M+ +KK
Sbjct: 566 ACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKK 625
Query: 515 PGYSVVEVNGELHAFIM 531
G S + + ++HAF++
Sbjct: 626 LGCSWIVIKKQVHAFLV 642
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 198/410 (48%), Gaps = 29/410 (7%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSM 117
E L + M++ + P SST+ L+ C++ L + + ++ + D+ +G+ +
Sbjct: 47 EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++YVK G + EA F++M K++V W++MI + +EA+ + M+ GI +
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ AC DL G H ++ +V V LVDMYAK G ++ A +F
Sbjct: 167 FTFASILPACTDL--EVLG-EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDK 223
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQ---------------SCGFEPDSVSLV 282
M + ++V+W A+I+G+ QNGL L+L E+ CG ++V L
Sbjct: 224 MPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELF 283
Query: 283 SALLACAQI-------GFLKLGKSIHGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARA 333
+ + G+++ G + + + + N++ +VI +++ G A
Sbjct: 284 EKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALK 343
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
LF M +++SWN +IA Y +G E AL LF QM +KP+ TFA +L A + +
Sbjct: 344 LFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAV 403
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+E+G ++++ + Q +V + A+ G +E+A K+ D M +
Sbjct: 404 LEQGNEAHEVVI-RSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQ 452
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 42/339 (12%)
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD---LGDSRFGLSVHGYSI 204
++ L G+ REA+ + M + GI L+Q C + L D++ +H + I
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKL---LHAHMI 91
Query: 205 RRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ D+ + LV +Y K G L A VF M N+V+W A+I+ +A++ L
Sbjct: 92 QTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEAL 151
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
EMQ G +P+ + S L AC + L H V+ F+ N+ +G ++DMY
Sbjct: 152 GFFYEMQDVGIQPNHFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLVDMY 208
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+K G AR LFD+M RD++SWN +IA Y +G E+AL LF + + K D T+
Sbjct: 209 AKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLF----QEIPKRDVITWN 264
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSK------------------------YKIQPTEK--H 416
++++ + G VE F+ M + ++I P
Sbjct: 265 TMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVIS 324
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++ A+ G+VEEALK+ +M E + W A+++G
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMP-ECNVVSWNAMIAG 362
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 292/534 (54%), Gaps = 1/534 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY D+ +A +F V +N +++A+ + + L+ QM +R
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C ++ +GE+I +V+ G+ +D++V ++++Y K G + +A
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
E ++ KD+V W+SMI G V + ++A+ A+K M+K GI D + + I CA +
Sbjct: 403 LEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM 462
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R GL +H + DV + +LV++YA+ G + A F+ M + +T L+SGF
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGF 522
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+GL L++ M M G + + + VSAL A A + +K GK IH ++ F
Sbjct: 523 AQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G ++I +Y KCG A+ F +M R+ +SWN II S HG G EAL LF QM +
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+ TF +L+A SH GLVEEG +F M +Y I+P HYAC++D+ RAG+++
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K ++ M VW LLS C HK +GE AK +L+L P D + L+SN +A+
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+KW VRK MR G++K PG S +EV +HAF + D+ H E I L
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 222/433 (51%), Gaps = 4/433 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR++FEEL R ++ +++ Y++ E LGLY QM + V P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L +C G I + + G+ +++FVG++++ LY++CG A F
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V ++++I+G G A++ ++ M+ G+ D V + L+ ACA LGD +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y + ++ D ++ SL+D+Y K G ++ A +F + R N+V W ++ F Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ EL +MQ+ G P+ + L C + LG+ IH +V+ F+ ++ +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK G AR + + ++ +D++SW +IA Y H ++AL+ F +M + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 375 KPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ AS +S + + +G + + VS Y + + +V+L AR G + EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS--IWNALVNLYARCGRIREA 500
Query: 434 LKIVDSMSTEPGL 446
+ M + G+
Sbjct: 501 FSSFEEMELKDGI 513
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 219/453 (48%), Gaps = 6/453 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEE 97
RG + + + E P +VL L+ ++ F AL+AC + ++ E
Sbjct: 4 RGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I KAV G G VG+ +++LY K G + A FE++ +D V W +M++G NG
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA+ Y++M + G+ V+ ++ +C G +H + ++ V +
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
++ +Y + G LA VF +M + VT+ LISG AQ G LE+ EMQ G PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V++ S L ACA +G L+ G +H Y + + ++ S++D+Y KCG A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ WN+++ ++G ++ LF QM ++P+ T+ +L + + ++
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G L V K + ++D+ ++ G +E+A ++++ M E + W ++++G
Sbjct: 364 GEQIHSLSV-KTGFESDMYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGY 421
Query: 457 HNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
H+ K++ K PD++G+ + +S
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAIS 454
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 311/552 (56%), Gaps = 13/552 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N + ++F+E+P R V ++N++I ++ ++ + L L+ +M + D P+
Sbjct: 147 LVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPN 206
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + TVA+ AC L+ L+ G+EI RK ++ + D +V S+++++Y +C + A F+
Sbjct: 207 SVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQ 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+RK LV W+SMI G V G + V+ RM EG + + ++ AC+ +
Sbjct: 267 QMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLH 326
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHGY IR ++ D+ + SL+D+Y K G + LA VF + + +W +ISG+
Sbjct: 327 GKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVS 386
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVL 314
G +++ +M S G +PD V+ S L C+Q+ L+ GK IH + R + + +L
Sbjct: 387 VGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELL 446
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMYSKCG A +F+ + +D++SW V+I++YG HG EAL F +M + V
Sbjct: 447 LSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGV 506
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF ++LSA H+GL++EG +F M SKY I+ + + Y+C++D+L RAG + EA
Sbjct: 507 KPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAY 566
Query: 435 KIVDSM-STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
I+ T + L C H+ +G +AK +++ PDD + ++ N +A
Sbjct: 567 GILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASG 626
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ W+ VR M++ GM+K PG S +E+N ++ F ED+SH Q E++ L
Sbjct: 627 ESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDRSHPQAENVYECL------- 679
Query: 554 RAISSWLQGHME 565
+ L GHME
Sbjct: 680 ----ALLSGHME 687
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 255/477 (53%), Gaps = 7/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-R 73
+I +Y D SAR +FE + +R V +NS++ YS+ + L ++ +++ +
Sbjct: 44 LINVYFACKDHCSARLVFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICV 103
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PDS T+ +KA +L +G I V+ G+ DV V SS++ +Y K +++
Sbjct: 104 PDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQV 163
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M +D+ W+++I+ G +A++ + RM++ + + V + I AC+ L
Sbjct: 164 FDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCL 223
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +++ LD V ++LVDMY + L++A VF+ M R ++V W ++I G+
Sbjct: 224 ERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGY 283
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
G + S +ELL M G P +L S L+AC++ L GK +HGY +R D ++
Sbjct: 284 VARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADI 343
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S+ID+Y KCG A +F + Q + SWNV+I+ Y G+ +A+ ++ QM+
Sbjct: 344 YINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSV 403
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+PD TF S+LS S +E+G+ L +S+ +++ E + ++D+ ++ G V+E
Sbjct: 404 GVQPDIVTFTSVLSTCSQLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNVKE 462
Query: 433 ALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
A +I +S+ + ++ W ++S G H + ++ + + PD + A++S
Sbjct: 463 ASRIFNSIPKKDVVS-WTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLS 518
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 193/385 (50%), Gaps = 7/385 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+SS L+ C + L+ + + ++ + +G +DV + S++N+Y C A + F
Sbjct: 2 ESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVF 61
Query: 135 EKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLGD 192
E + R D+ W+S+++G N + + +KR+ I D +I+A LG
Sbjct: 62 ENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGR 121
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H ++ DV V +SLV MYAK + + VF M ++ +W +IS
Sbjct: 122 EFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISS 181
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFN 311
F Q G A LEL M+ FEP+SVS+ A+ AC+++ L+ GK IH Y + F+ +
Sbjct: 182 FYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELD 241
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY +C AR +F QM+ + L++WN +I Y G + + L +MI
Sbjct: 242 EYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMII 301
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEV 430
+P +T S+L A S S + G++ ++ + + + C ++DL + GEV
Sbjct: 302 EGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIR--SVVDADIYINCSLIDLYFKCGEV 359
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
+ A + V + + + W ++SG
Sbjct: 360 KLA-ETVFLKTQKDVVESWNVMISG 383
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 303/520 (58%), Gaps = 3/520 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG +++K+F+E+ R V ++N+II ++S + + L ++ MI E +RP+
Sbjct: 282 LVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPN 341
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + L L K+G E+ ++++ +DVF+ +S++++Y K G A F
Sbjct: 342 SVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFN 401
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM +++V W++MI N EAV+ ++M+ +G + V ++ ACA LG
Sbjct: 402 KMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNV 461
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H IR +LD+ V +L DMY+K G L+LA +VF N+S + V++ LI G+++
Sbjct: 462 GKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYNILIIGYSR 520
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ +L L EM+ G PD VS + + ACA + F++ GK IHG VR+ F +L +
Sbjct: 521 TNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFV 580
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++D+Y++CG A +F +Q++D+ SWN +I YG+ G + A++LF M E V
Sbjct: 581 ANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGV 640
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+ D +F ++LSA SH GL+E+GR +F +M I+PT HYACMVDLL RAG +EEA
Sbjct: 641 EYDSVSFVAVLSACSHGGLIEKGRKYFKMMCD-LNIEPTHTHYACMVDLLGRAGLMEEAA 699
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ +S P +W ALL C H +G A+ + +L P G + L+SN +A +
Sbjct: 700 DLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAE 759
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+W+E VR+ M+ G KK PG S V+V +HAF++ +K
Sbjct: 760 RWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLVGEK 799
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 245/445 (55%), Gaps = 9/445 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI--KEDVR 73
++A YG A K+F+E+P R ++N++I S E LG + M+ K ++
Sbjct: 178 LLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQ 237
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T L C D M + A+++G G V VG++++++Y KCG +
Sbjct: 238 PDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKK 297
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ ++++ W+++I F G+ +A+D ++ M EG+ + V + ++ +LG
Sbjct: 298 VFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGL 357
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G+ VHG+S++ + DV + SL+DMYAK+G +AS +F M NIV+W A+I+
Sbjct: 358 FKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIAN 417
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
FA+N L +EL+ +MQ+ G P++V+ + L ACA++GFL +GK IH +R +
Sbjct: 418 FARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLD 477
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L + ++ DMYSKCG + A+ +F+ + RD +S+N++I Y E+L LF +M
Sbjct: 478 LFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRL 536
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEV 430
++PD +F ++SA ++ + +G+ L+V K+ T A ++DL R G +
Sbjct: 537 LGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVR--KLFHTHLFVANSLLDLYTRCGRI 594
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
+ A K+ + + +A W ++ G
Sbjct: 595 DLATKVFYCIQNKD-VASWNTMILG 618
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 197/364 (54%), Gaps = 5/364 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R +N++I A S F+ G YN M++ V+PD T+ LK C ++++ G E+
Sbjct: 101 RSAFLWNTLIRANS-IAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
A +LG+ DVFVG+++L Y CG +AM F++M +D V W+++I +G
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219
Query: 159 REAVDAYKRM--KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQ 215
EA+ ++ M K GI D V ++ ++ CA+ D VH Y+++ L VKV
Sbjct: 220 EEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVG 279
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+LVD+Y K G + VF + N+++W A+I+ F+ G L++ M G
Sbjct: 280 NALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMR 339
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+SV++ S L ++G KLG +HG++++ + ++ + S+IDMY+K G A +
Sbjct: 340 PNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTI 399
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F++M R+++SWN +IA++ + EA+ L QM P++ TF ++L A + G +
Sbjct: 400 FNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFL 459
Query: 395 EEGR 398
G+
Sbjct: 460 NVGK 463
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/486 (36%), Positives = 287/486 (59%), Gaps = 3/486 (0%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ P+ + ++ L C L LK G I + +D+ + + +LN+Y KCG + EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+KM KD+V W+ +I+G +GQ EA+ + +M G +E + L++A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H +S++ +++V V +SL+DMYA+ H+ A +F +++ N+V+W ALI+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G A+ G + L +M GFEP + S++LACA G L+ GK +H + ++
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFT-YSSVLACASSGSLEQGKWVHAHVIKSGGQP 339
Query: 312 LV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +G ++IDMY+K G A+ +F ++ +D++SWN II+ Y HG G EAL LF QM+
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V+P+ TF S+L+A SHSGL++EG+Y+F+LM K+KI+ H+ +VDLL RAG +
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRL 458
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA K ++ M +P AVW ALL C HK +G A+++ +L+P D G H L+SN +
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 518
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A + + A VRK M++SG+KK P S VE+ E+H F+ D SH E+I + +K+
Sbjct: 519 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 578
Query: 551 LEMRAI 556
+++ I
Sbjct: 579 GKIKEI 584
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 174/343 (50%), Gaps = 3/343 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + A+ LF+++P + + ++ +I YS+ E L L+ +M+ +P+
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + LKA + G ++ +++ GY +V VGSS+L++Y + M EA V F
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ K++V W+++I G G+ + + +M ++G + ++ ACA G
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQ 324
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ + +L+DMYAK+G + A VF+ + + +IV+W ++ISG+AQ
Sbjct: 325 GKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ 384
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
+GL L+L +M +P+ ++ +S L AC+ G L G+ + + + +
Sbjct: 385 HGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 444
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+V+D+ + G + A ++M + + W ++ + +H
Sbjct: 445 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 326/593 (54%), Gaps = 52/593 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMIKE-D 71
++++YG +AR++F+E+ RGV ++NSI+ AY + + ++ +M ++
Sbjct: 186 LVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG 245
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+RPD+ + L AC S+ G+++ A+ G DVFVG++++++Y KCG M EA
Sbjct: 246 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 305
Query: 132 VAFEKMQRKDLVCWSSMINGL------------------------------VFNGQPR-- 159
FE+M+ KD+V W++M+ G V G +
Sbjct: 306 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 365
Query: 160 ---EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD----- 211
EA+D +++M G + + V ++ L+ CA G G H ++I+ LNLD
Sbjct: 366 LGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPG 425
Query: 212 --VKVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGALISGFAQNGLAGSTLELLM 267
+ V +L+DMY+K A +F + + +VTW LI G AQ+G A LEL
Sbjct: 426 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 485
Query: 268 EM-QSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN-LVLGTSVIDMYS 323
+M Q F P++ ++ AL+ACA++G L+ G+ IH Y +R RF+ L + +IDMYS
Sbjct: 486 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 545
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
K G AR +FD M R+ +SW ++ YG+HG GEEAL +F +M + + PD TF
Sbjct: 546 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVV 605
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A SHSG+V++G +F+ M + + P +HYACMVDLL+RAG ++EA++++ M +
Sbjct: 606 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 665
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P AVWVALLS C + +GE A ++L+L + G + L+SN +A + W++VA +R
Sbjct: 666 PTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIR 725
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
M+ +G+KK PG S V+ F D SH + I +L+ L ++A+
Sbjct: 726 YLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKAL 778
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 233/455 (51%), Gaps = 54/455 (11%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+VL LY +M + RPD TF LKAC + + G + G+ +VFVG+ ++
Sbjct: 128 DVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLV 187
Query: 119 NLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GID 174
++Y +CG A F++M+ + DLV W+S++ + G A+ ++RM ++ GI
Sbjct: 188 SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIR 247
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D V ++ ++ ACA +G G VHGY++R L DV V ++VDMYAK G ++ A+ V
Sbjct: 248 PDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKV 307
Query: 235 FKNMS-----------------------------------RINIVTWGALISGFAQNGLA 259
F+ M +N+VTW A+I+G+AQ GL
Sbjct: 308 FERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLG 367
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFN----- 311
L++ +M CG EP+ V+LVS L CA G L GK H + ++ D N
Sbjct: 368 FEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDD 427
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRD--LISWNVIIASYGIHGHGEEALSLFLQM 369
L++ ++IDMYSKC P ARA+FD + +D +++W V+I HG EAL LF QM
Sbjct: 428 LMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487
Query: 370 IE--TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLAR 426
++ V P+ T + L A + G + GR V + + + A C++D+ ++
Sbjct: 488 LQPDNFVMPNAFTISCALMACARLGALRFGRQ-IHAYVLRNRFESAMLFVANCLIDMYSK 546
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+G+V+ A + D+M G++ W +L++G H +
Sbjct: 547 SGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGR 580
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 170/356 (47%), Gaps = 48/356 (13%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ +I V G + + Y+RM++ G D +++AC ++ R G SVH
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI---NIVTWGALISGFAQNGLAGS 261
+V V LV MY + G + A VF M ++V+W ++++ + Q G +
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 262 TLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVI 319
+++ M + G PD+VSLV+ L ACA +G GK +HGY +R F ++ +G +V+
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMY+KCG+ A +F++M+ +D++SWN ++ Y G ++AL LF ++ E ++ +
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T++++++ + GL EAL +
Sbjct: 353 TWSAVIAGYAQRGL------------------------------------GFEALDVFRQ 376
Query: 440 M---STEPGLAVWVALLSGCHNHKKFSIGEKV----AKKVLKLNPDDLGIHALVSN 488
M +EP + V+LLSGC + G++ K +L L+ +D G +V N
Sbjct: 377 MLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVIN 432
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 216 TSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
T ++ MY A V + + S + W LI G L+L MQ G
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+ PD + L AC +I + G S+H F++N+ +G ++ MY +CG AR
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 333 ALFDQMQSR---DLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSAL 388
+FD+M+ R DL+SWN I+A+Y G A+ +F +M E + ++PD + ++L A
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPT--EKHYA--CMVDLLARAGEVEEALKIVDSMSTEP 444
+ G G+ V Y ++ E + +VD+ A+ G +EEA K+ + M +
Sbjct: 261 ASVGAWSRGK-----QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK- 314
Query: 445 GLAVWVALLSGCHNHKKF----SIGEKVAKKVLKLN 476
+ W A+++G +F + EK+ ++ ++LN
Sbjct: 315 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 350
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 309/541 (57%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+V+ARK+F+ + + ++N++I + L L+ M++++V+P+
Sbjct: 236 LMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPN 295
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T A L D+ +E+ AV+ G+ DV +S++ +Y G M +A F
Sbjct: 296 LMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFS 355
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D + W++MI+G NG P +A++ Y M+ + D++ + + ACA LG
Sbjct: 356 RMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDV 415
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H + + V V +L++MYAK+ +D A VFK M ++V+W ++I+GF
Sbjct: 416 GVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCF 475
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N L M + +P+SV+ ++AL ACA G L+ GK IH + +R + L
Sbjct: 476 NHRNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYL 534
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++ID+Y KCG A A F ++D++SWN++IA + HG+GE ALS F QM++
Sbjct: 535 PNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGE 594
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LL A S G+V EG F M KY I P KHYACMVDLL+R G++ EA
Sbjct: 595 CPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAY 654
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ M P AVW ALL+GC H+ +GE AK VL+L P+D G H L+ + +A
Sbjct: 655 NFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAG 714
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W+++A VRKTMR+ G+ G S VEV G +HAF+ +D+SH Q +I VL+ +Y M+
Sbjct: 715 IWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMK 774
Query: 555 A 555
A
Sbjct: 775 A 775
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 194/373 (52%), Gaps = 5/373 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ ++ +G + A ++F ++P R V ++N ++ Y + E L LY++M+
Sbjct: 132 GNAMLSMLVRFG---ETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
VRPD TF L++C + D +MG E+ + G+ +V V ++++ +Y KCG +
Sbjct: 189 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVA 248
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M D + W++MI G NG+ ++ + M ++ + + + + + A
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL 308
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L D F +HG +++R DV SL+ MYA G + A VF M + ++W A+
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NG LE+ M+ PD +++ SAL ACA +G L +G +H + F
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 428
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ ++++MY+K A +F M +D++SW+ +IA + + EAL F
Sbjct: 429 MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRH 488
Query: 369 MIETMVKPDHSTF 381
M+ VKP+ TF
Sbjct: 489 MLAD-VKPNSVTF 500
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 204/402 (50%), Gaps = 26/402 (6%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-----YGND------VFVGSSMLNLYV 122
PD + + C WR+AVE G + +D + +G++ML++ V
Sbjct: 92 PDEDAYVALFRLCE-----------WRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLV 140
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ G+ A F KM +D+ W+ M+ G G EA+D Y RM G+ D
Sbjct: 141 RFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPC 200
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++++C + D R G VH + +R +V V +L+ MYAK G + A VF +M+ ++
Sbjct: 201 VLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMD 260
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W A+I+G +NG + LEL + M +P+ +++ S +A + + K +HG
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
V+R F ++ S+I MY+ G+ AR +F +M +RD +SW +I+ Y +G ++
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK 380
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL ++ M V PD T AS L+A + G ++ G +L SK + A ++
Sbjct: 381 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNA-LL 439
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKF 462
++ A++ +++A+++ M E + W ++++G C NH+ F
Sbjct: 440 EMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFNHRNF 480
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 327/593 (55%), Gaps = 52/593 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMIKE-D 71
++++YG +AR++F+E+ RGV ++NSI+ AY + + ++ +M ++
Sbjct: 167 LVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG 226
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+RPD+ + L AC S+ G+++ A+ G DVFVG++++++Y KCG M EA
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 286
Query: 132 VAFEKMQRKDLVCWSSMINGL------------------------------VFNGQPR-- 159
FE+M+ KD+V W++M+ G V G +
Sbjct: 287 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
Query: 160 ---EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD----- 211
EA+D +++M+ G + + V ++ L+ CA G G H ++I+ LNLD
Sbjct: 347 LGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPG 406
Query: 212 --VKVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGALISGFAQNGLAGSTLELLM 267
+ V +L+DMY+K A +F + + +VTW LI G AQ+G A LEL
Sbjct: 407 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 466
Query: 268 EM-QSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN-LVLGTSVIDMYS 323
+M Q F P++ ++ AL+ACA++G L+ G+ IH Y +R RF+ L + +IDMYS
Sbjct: 467 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 526
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
K G AR +FD M R+ +SW ++ YG+HG GEEAL +F +M + + PD TF
Sbjct: 527 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVV 586
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A SHSG+V++G +F+ M + + P +HYACMVDLL+RAG ++EA++++ M +
Sbjct: 587 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 646
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P AVWVALLS C + +GE A ++L+L + G + L+SN +A + W++VA +R
Sbjct: 647 PTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIR 706
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
M+ +G+KK PG S V+ F D SH + I +L+ L ++A+
Sbjct: 707 YLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKAL 759
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 234/455 (51%), Gaps = 54/455 (11%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+VL LY +M + RPD TF LKAC + + G + G+ +VFVG+ ++
Sbjct: 109 DVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLV 168
Query: 119 NLYVKCGKMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GID 174
++Y +CG A F++M+ + DLV W+S++ + G A+ ++RM ++ GI
Sbjct: 169 SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIR 228
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D V ++ ++ ACA +G G VHGY++R L DV V ++VDMYAK G ++ A+ V
Sbjct: 229 PDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKV 288
Query: 235 FKNMS-----------------------------------RINIVTWGALISGFAQNGLA 259
F+ M +N+VTW A+I+G+AQ GL
Sbjct: 289 FERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLG 348
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFN----- 311
L++ +M+ CG EP+ V+LVS L CA G L GK H + ++ D N
Sbjct: 349 FEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDD 408
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRD--LISWNVIIASYGIHGHGEEALSLFLQM 369
L++ ++IDMYSKC P ARA+FD + +D +++W V+I HG EAL LF QM
Sbjct: 409 LMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 468
Query: 370 IE--TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLAR 426
++ V P+ T + L A + G + GR V + + + A C++D+ ++
Sbjct: 469 LQPDNFVMPNAFTISCALMACARLGALRFGRQ-IHAYVLRNRFESAMLFVANCLIDMYSK 527
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+G+V+ A + D+M G++ W +L++G H +
Sbjct: 528 SGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGR 561
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 42/353 (11%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ +I V G + + Y+RM++ G D +++AC ++ R G SVH
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI---NIVTWGALISGFAQNGLAGS 261
+V V LV MY + G + A VF M ++V+W ++++ + Q G +
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 262 TLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVI 319
+++ M + G PD+VSLV+ L ACA +G GK +HGY +R F ++ +G +V+
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMY+KCG+ A +F++M+ +D++SWN ++ Y G ++AL LF ++ E ++ +
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T++++++ + GL E A +V +++ S
Sbjct: 334 TWSAVIAGYAQRGLGFE------------------------------ALDVFRQMRLCGS 363
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKV----AKKVLKLNPDDLGIHALVSN 488
EP + V+LLSGC G++ K +L L+ +D G +V N
Sbjct: 364 ---EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVIN 413
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 216 TSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
T ++ MY A V + + S + W LI G L+L MQ G
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+ PD + L AC +I + G S+H F++N+ +G ++ MY +CG AR
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 333 ALFDQMQSR---DLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSAL 388
+FD+M+ R DL+SWN I+A+Y G A+ +F +M E + ++PD + ++L A
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPT--EKHYA--CMVDLLARAGEVEEALKIVDSMSTEP 444
+ G G+ V Y ++ E + +VD+ A+ G +EEA K+ + M +
Sbjct: 242 ASVGAWSRGK-----QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK- 295
Query: 445 GLAVWVALLSGCHNHKKF----SIGEKVAKKVLKLN 476
+ W A+++G +F + EK+ ++ ++LN
Sbjct: 296 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 331
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 296/529 (55%), Gaps = 13/529 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K F + + ++N+I+ ++S+ + ++VL L+ +M+KE DS A+KAC
Sbjct: 15 ASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFG 74
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L + + A++L D +V +++N+Y + G + EA FE++ K+ V W M
Sbjct: 75 LSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 134
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G + + + + RM++ G + D V+ GLIQAC ++ + G + HG
Sbjct: 135 IKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYFSSGY 194
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V+ G LD A +F+ + B+V W A+I+GFA+NG A ++ + +
Sbjct: 195 VYEVR------------GFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQ 242
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M + P+SV+ S +LAC+ +G LK G+S+HGY +R + ++ TS IDMY+KCG
Sbjct: 243 MLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGC 302
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F Q+ +++ SW+ +I +G+HG EAL+LF +M P+ TF S+LSA
Sbjct: 303 IVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSA 362
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SHSG +EEG F M Y I P E+HYACMVDLL RAG+++EAL +++M TEPG +
Sbjct: 363 CSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGAS 422
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
W ALL C H++ + E+VAKK+L L D G++ ++SN +A WE V R M
Sbjct: 423 AWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMC 482
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ G+ K+ G++ +E+ +L+ F ED+ + I + L MR +
Sbjct: 483 EKGLLKIVGFTSIEIKEKLYLFSSEDRFAYKNTQIESLWNSLKERMREL 531
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 13/339 (3%)
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y++ G ++ A AF + ++L W++++ N + + +KRM KEG D +
Sbjct: 6 YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 65
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++AC L + H +I+ L D V +L+++Y + G L+ A VF+ +
Sbjct: 66 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 125
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N V WG +I G+ EL M+ GFE D + + AC + K GK+
Sbjct: 126 KNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 185
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
HG L S +Y G A LF+ + RB++ W+ IIA + +G
Sbjct: 186 HG-----------LYFSSGYVYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRAL 234
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
E++S+F QM+ V P+ TFAS++ A S G +++GR M+ + ++ K+Y
Sbjct: 235 ESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI-RNGVELDVKNYTSF 293
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+D+ A+ G + A ++ + E + W +++G H
Sbjct: 294 IDMYAKCGCIVTAYRVFCQI-PEKNVFSWSTMINGFGMH 331
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI+ + + I +Y IV+A ++F ++P + V +++++I + E
Sbjct: 278 MIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEA 337
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
L L+ +M + P+S TF L AC + EE W K++ YG +
Sbjct: 338 LNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI---EEGWSHFKSMSRDYGITPVEEHYAC 394
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKD-LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
M++L + GK++EA+ M + W +++ + + A + K++ D
Sbjct: 395 MVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQ 454
Query: 176 DEVVMMGLIQACADLG 191
V +M L AD+G
Sbjct: 455 SGVYVM-LSNIYADVG 469
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/507 (34%), Positives = 298/507 (58%), Gaps = 24/507 (4%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE------------EIWRKAVELG 106
E L +++QMI E V PDS T +AC L L++G + R+A++
Sbjct: 474 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPE 533
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
F+G +++ LY G + + FE ++ K ++ W+++I+ NGQP EA+ +
Sbjct: 534 LD---FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFV 590
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+M+ +G+ D + + AC + S+ G +HGY I+ N + VQ +L+DMYAK G
Sbjct: 591 QMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCG 649
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ A+ +F+ + ++VTW ++I GF+QNG + + L +M + D ++ +S +
Sbjct: 650 FVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQ 709
Query: 287 ACAQIGFLKLGKSIHG----YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
AC+ +G+L+ GK +H Y +R+ + L T++ DMYSKCG A +FD+M R
Sbjct: 710 ACSHLGYLEKGKWVHHKLIMYGLRKDSY---LDTALTDMYSKCGELQMAHGVFDRMSERS 766
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SW+V+IA YG+HG +SLF QM+ + +KP+ TF +LSA SH+G VEEG+ +F+
Sbjct: 767 IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN 826
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M S++ ++P H+ACMVDLL+RAG++ A +I+ S+ ++W ALL+GC HK+
Sbjct: 827 SM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRI 885
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
I + + K +L ++ D G + L+SN +A E W++ VR M+ G++KVPGYS +E+
Sbjct: 886 DIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEI 945
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ +++ F D SH+Q +DI L+
Sbjct: 946 DKKIYRFGPGDTSHSQTKDIYRFLENF 972
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 214/407 (52%), Gaps = 35/407 (8%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVF--------------- 154
D F+ ++ YV G EA+ + +M +D + I+ VF
Sbjct: 410 DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQD----QTQISNFVFPSVLKACSGFGDLSV 465
Query: 155 ---NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL--------SVHGYS 203
NGQ E +D + +M E ++ D V M+ + +AC++LG R G SVHG+
Sbjct: 466 GGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFV 525
Query: 204 IRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
IRR ++ ++ + +L+++YA TG+L VF+ + I++W LIS F +NG
Sbjct: 526 IRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEA 585
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMY 322
L L ++MQ+ G PDS SL S+L AC I F +LG IHGY ++ +FN + ++IDMY
Sbjct: 586 LLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMY 645
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+KCG A +F++++ + L++WN +I + +G+ EA++LF QM VK D TF
Sbjct: 646 AKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFL 705
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S++ A SH G +E+G+ W + Y ++ + D+ ++ GE++ A + D MS
Sbjct: 706 SVIQACSHLGYLEKGK-WVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS- 763
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
E + W +++G H + + + ++L + P+D+ ++S
Sbjct: 764 ERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILS 810
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 158/283 (55%), Gaps = 1/283 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY ++ K+FE + + + ++N++I ++R P E L L+ QM + + PD
Sbjct: 541 LMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPD 600
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + +L AC ++ ++G +I ++ G ND FV ++++++Y KCG ++ A FE
Sbjct: 601 SYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFE 659
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K++ K LV W+SMI G NG EA+ + +M + D++ + +IQAC+ LG
Sbjct: 660 KIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEK 719
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH I L D + T+L DMY+K G L +A VF MS +IV+W +I+G+
Sbjct: 720 GKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGM 779
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+G +T+ L +M G +P+ ++ + L AC+ G ++ GK
Sbjct: 780 HGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGK 822
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
T +I+ Y++ G+ ++ +FD D W V+I Y G EEA+SL+ +M+ +
Sbjct: 384 TKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQT 443
Query: 375 KPDHSTFASLLSALS---------HSGLVEEGRYWFDLMVSKYKIQP 412
+ + F S+L A S +G EG F M+S+ ++P
Sbjct: 444 QISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE-AVEP 489
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y ++ A +F+ + R + +++ +I Y + L+NQM+ ++P+ T
Sbjct: 745 MYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDIT 804
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGY--GNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
F L AC ++ G+ + E G +D F + M++L + G +N A
Sbjct: 805 FMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHF--ACMVDLLSRAGDLNGAYQIITS 862
Query: 137 MQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+ + W +++NG + + +D K ++K +D D
Sbjct: 863 LPFPANSSIWGALLNGCRIH----KRIDIIKSIEKNLLDVD 899
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 304/540 (56%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + ++ AR +F+++ + + ++ ++ Y+ E L L+NQM +P+
Sbjct: 177 LIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPN 236
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + ALK+C+ L +G+ + A++ Y +D+FVG ++L LY K G++ +A FE
Sbjct: 237 NFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFE 296
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + DL+ WS MI + + +EA+D + RM++ + + ++QACA
Sbjct: 297 EMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDL 356
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ LN +V V +++D+YAK G ++ + +F+ + N VTW +I G+ Q
Sbjct: 357 GKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQ 416
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + L M +P V+ S L A A + L+ G IH T++ ++ + V+
Sbjct: 417 LGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVV 476
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY+KCG + AR FD+M RD +SWN +I Y +HG EAL+LF M T
Sbjct: 477 ANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDC 536
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF +LSA S++GL+ +G+ F+ M Y I+P +HY CMV LL R G +EA+
Sbjct: 537 KPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAM 596
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K++ ++ +P + VW ALL C HKK +G A+ VL++ P D H L+SN +A
Sbjct: 597 KLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAG 656
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ VA VRK M+K ++K PG S VE G +H F + D SH + I +L+ L + R
Sbjct: 657 RWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTR 716
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 231/453 (50%), Gaps = 5/453 (1%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
T+L + ++ ++ Y N + A KLF+E+P ++ ++ YSR + L
Sbjct: 66 TSLDLFAQNI--LLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHF 123
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
++ KE + FT LK VS+ + + +LG+ D FVG+++++ Y
Sbjct: 124 ILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSV 183
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
G ++ A F+ + KD+V W+ M+ N E++ + +M+ G + + G
Sbjct: 184 RGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGA 243
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+++C L G SVHG +++ + D+ V +L+++YAK+G + A +F+ M + ++
Sbjct: 244 LKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDL 303
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
+ W +I+ +AQ+ + L+L + M+ P++ + S L ACA L LGK IH
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSC 363
Query: 304 TVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
++ + N+ + +++D+Y+KCG + LF+++ R+ ++WN II Y G GE A
Sbjct: 364 VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERA 423
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
++LF M+E ++P T++S+L A + +E G L + + T + ++D
Sbjct: 424 MNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS-LID 482
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ A+ G + +A D M+ ++ W A++ G
Sbjct: 483 MYAKCGRINDARLTFDKMNKRDEVS-WNAMICG 514
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 199/362 (54%), Gaps = 3/362 (0%)
Query: 95 GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVF 154
G+ + ++ G D+F + +LN YV+ + +A F++M + + + + ++ G
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+ Q +A+ R+ KEG + + V L++ + + ++H + + D V
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
T+L+D Y+ G++D+A HVF ++ ++V+W +++ +A+N +L+L +M+ G+
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
+P++ ++ AL +C + +GKS+HG ++ +D +L +G +++++Y+K G A+
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
LF++M DLI W+++IA Y +EAL LFL+M +T V P++ TFAS+L A + S
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
++ G+ V K+ + ++D+ A+ GE+E ++K+ + + + W ++
Sbjct: 354 LDLGKQ-IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT-WNTII 411
Query: 454 SG 455
G
Sbjct: 412 VG 413
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 308/538 (57%), Gaps = 3/538 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT L + ++ +YG + +R++F+E+ R ++N+II + + E +
Sbjct: 135 VVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDA 194
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ MI V+P+S TF+ L V L G+EI ++ G +D+FV ++++++
Sbjct: 195 LEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDM 254
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G+ +A F ++ K++V W++M+ N AVD ++M+ +G + V
Sbjct: 255 YAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTF 314
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ ACA +G R G +H +IR ++D+ V +L DMYAK G L+LA VFK +S
Sbjct: 315 TNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-ISL 373
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V++ LI G++Q +L L +EM G + D VS + + ACA + LK GK +
Sbjct: 374 RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEV 433
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG VR+ +L + +++D Y KCG A +F Q+ SRD SWN +I YG+ G
Sbjct: 434 HGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGEL 493
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
A++LF M E V+ D ++ ++LSA SH GLVEEG+ +F+ M + I+PT+ HYAC
Sbjct: 494 TIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYAC 552
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG +EEA+K+++S+ EP VW ALL C H + A+ + KL P
Sbjct: 553 MVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQH 612
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
G ++++SN +A KW+E VRK M+ G KK PG S V+++ ++HAF+ ++ N
Sbjct: 613 SGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGERMMN 670
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 244/442 (55%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP 74
++ YG + +++F+E+ R V ++NS+I +S E + L+ +M ++ RP
Sbjct: 48 LLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRP 107
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ + L C L D G +I V+ G + V VG++++++Y KCG + ++ F
Sbjct: 108 NMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVF 167
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ ++ V W+++I L + + ++A++ ++ M G+ + V ++ +L
Sbjct: 168 DEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFD 227
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +HG+S+R L D+ V +L+DMYAK+G AS+VF + NIV+W A+++ FA
Sbjct: 228 FGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFA 287
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN L + ++L+ +MQ+ G P+SV+ + L ACA+IGFL+ GK IH +R +L
Sbjct: 288 QNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLF 347
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++ DMY+KCG + AR +F ++ RD +S+N++I Y + E+L LFL+M
Sbjct: 348 VSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKG 406
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+K D ++ ++SA ++ +++G+ L V K+ + ++D + G ++ A
Sbjct: 407 MKLDVVSYMGVISACANLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLA 465
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
K+ + + A W +++ G
Sbjct: 466 GKVFRQIPSRD-TASWNSMILG 486
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 174/329 (52%), Gaps = 2/329 (0%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
VR D TF LKAC + ++ G EI +LG+ +DVFVG+++L Y CG + +
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEVVMMGLIQACADL 190
F++M +D+V W+S+I +G EA+ + M + G + V ++ ++ CA L
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D G +H Y ++ L+ V V +LVD+Y K G++ + VF +S N V+W A+I
Sbjct: 123 EDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAII 182
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
+ A LE+ M G +P+SV+ S L ++ GK IHG+++R +
Sbjct: 183 TSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLE 242
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++ + ++IDMY+K G A +F+Q+ ++++SWN ++A++ + A+ L QM
Sbjct: 243 SDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQM 302
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGR 398
P+ TF ++L A + G + G+
Sbjct: 303 QADGEIPNSVTFTNVLPACARIGFLRPGK 331
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 146/287 (50%), Gaps = 8/287 (2%)
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ D+ +++ACAD + G +HG + + DV V +L+ Y G L
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQ 290
VF M ++V+W ++I F+ +G + L EM GF P+ VS+VS L CA
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+ G+ IH Y V+ D + +G +++D+Y KCG +R +FD++ R+ +SWN I
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR--YWFDLMVSK 407
I S ++AL +F MI+ VKP+ TF+S+L L L + G+ + F L +
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSL---R 238
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ ++ ++D+ A++G +A + + + E + W A+++
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIG-EKNIVSWNAMVA 284
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 315/574 (54%), Gaps = 16/574 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K A +I+ Y N I A +F+E+P R + ++NSII + +
Sbjct: 10 LVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKA 69
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M E DS+T + ACV +G + +V G ++ +G+++L++
Sbjct: 70 VELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDM 129
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y C F M++K++V W++MI G + ++ M EGI D +
Sbjct: 130 YSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAI 189
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ A A + G SVHGY+IR + + V +L++MY K G+++ A +F ++++
Sbjct: 190 TSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTK 249
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ ++W LI G++++ LA L EM P++V++ L A A + L+ G+ +
Sbjct: 250 KDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREM 308
Query: 301 HGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H Y VRR + N V +++DMY KCG AR LFD + +++LISW ++IA YG+HG
Sbjct: 309 HAYAVRRGYLEDNFV-ANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGR 367
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G +A++LF QM + ++PD +F+++L A SHSGL +EG +F+ M ++++I+P KHYA
Sbjct: 368 GRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYA 427
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL G ++EA + +++M EP ++WV+LL GC H+ + EKVA+ V +L P+
Sbjct: 428 CMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPE 487
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L++N +A ++WE V ++ + G+++ G S +EV G+ H F E+++H Q
Sbjct: 488 NTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQ 547
Query: 539 YEDIVYVLKKLYLEMRAISSWLQGHMEEHEEHDP 572
I L + M + E HDP
Sbjct: 548 GMRIAEFLDDVARRM------------QEEGHDP 569
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 135/263 (51%), Gaps = 7/263 (2%)
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VHGY ++ V +L+ YAK+ ++ A VF M + +I++W ++I G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NGL +EL + M G E DS +L+S + AC Q + +G +HGY+VR L
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++DMYS C +F M+ ++++SW +I SY GH ++ LF +M +
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 375 KPDHSTFASLLSALSHSGLVEEGR--YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+PD S L A + + ++ G+ + + + ++ P ++++ + G +EE
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVAN---ALMEMYVKCGYMEE 239
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A I D ++ + ++ W L+ G
Sbjct: 240 ARFIFDHVTKKDTIS-WNTLIGG 261
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 287/516 (55%), Gaps = 34/516 (6%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S R +F+E+P + V +N +I +Y + L ++ M + PD T+ LKA
Sbjct: 89 STRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASS 148
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
DL +G +I V +G +VFVG+ ++++Y KCG + EA ++M +D+V W+S
Sbjct: 149 GSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNS 208
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
++ G NGQ +A++ K M+ G+ D M L+ A
Sbjct: 209 LVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA--------------------- 247
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
V + +D ++ +F ++ ++V+W +I+ + N + +++ +
Sbjct: 248 ------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFL 295
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
+M+ +PD++S+ S L AC + L LG+ IH Y VR R NL+L ++IDMY+KCG
Sbjct: 296 QMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCG 355
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR +FDQM+ RD++SW +I++YG++G G +A+SLF +M + + PD F S+LS
Sbjct: 356 CLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLS 415
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SH+GL++EGRY+F LM + KI P +H+ CMVDLL RAG+V+EA + M EP
Sbjct: 416 ACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNE 475
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VW ALLS C + IG A ++ +L P+ G + L+SN +A +WE+V VR M
Sbjct: 476 RVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIM 535
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ G+KK+PG S E++ +H F+ D+SH Q + I
Sbjct: 536 KTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQI 571
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 180/377 (47%), Gaps = 36/377 (9%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G ++ Y CG+ F+++ +K++V ++ MI V N +A+ +K M G
Sbjct: 73 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 132
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
ID D +++A + D G+ +H +R L+L+V V L+ MY K G L A
Sbjct: 133 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 192
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
V M ++V+W +L++G A+NG LE+ EM+ G +PD+ ++ S L A
Sbjct: 193 RVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA----- 247
Query: 293 FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
V T + ++ S + +F ++ ++ L+SWNV+IA
Sbjct: 248 --------------------VTNTCLDNV-------SFVKEMFMKLANKSLVSWNVMIAV 280
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y + EA+ +FLQM + V PD + AS+L A + GR + +V K ++QP
Sbjct: 281 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK-RLQP 339
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAK 470
++D+ A+ G +E A ++ D M + W +++S G + + ++
Sbjct: 340 NLLLENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMISAYGMNGKGRDAVSLFSRM 398
Query: 471 KVLKLNPDDLGIHALVS 487
+ L LNPD + +++S
Sbjct: 399 QDLGLNPDSIAFVSVLS 415
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 10/235 (4%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
+++ +++F +L + + ++N +I Y P E + ++ QM V PD+ + L
Sbjct: 254 DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 313
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
AC L L +G I V ++ + ++++++Y KCG + A F++M+ +D+V
Sbjct: 314 PACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV 373
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DLGDSRFGLS 198
W+SMI+ NG+ R+AV + RM+ G++ D + + ++ AC+ D G F L
Sbjct: 374 SWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLM 433
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
I + V +VD+ + G +D A K M N WGAL+S
Sbjct: 434 TEECKIVPRIEHFV----CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 13/294 (4%)
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
I L+ + + L+ YA G H+F + + N+V + +I + N L L
Sbjct: 63 IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDAL 122
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
+ M G +PD + L A + L +G IH VR D N+ +G +I MY
Sbjct: 123 LVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMY 182
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
KCG A + DQM RD++SWN ++A +G ++AL + +M +KPD T A
Sbjct: 183 GKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMA 242
Query: 383 SLLSALSHSGL--VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
SLL A++++ L V + F + +K + + M+ + EA+ I M
Sbjct: 243 SLLPAVTNTCLDNVSFVKEMFMKLANKSLVS-----WNVMIAVYMNNSMPAEAVDIFLQM 297
Query: 441 ---STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSNF 489
+ +P ++L C + +G ++ + V+ +L P+ L +AL+ +
Sbjct: 298 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMY 351
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQI----GFLKLGKSIHGYTVRRFDF--NLVLGTSV 318
L++ +Q F +V L L C QI +K K +H D N LG +
Sbjct: 20 LVLSIQKPKFTQQNVVLTENL--CGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKL 77
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+ Y+ CG P R +FD++ ++++ +NV+I SY + +AL +F M + PDH
Sbjct: 78 MRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDH 137
Query: 379 STFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
T+ +L A S H+ +V G DL V ++ + +
Sbjct: 138 YTYPCVLKASSGSEDLWVGMQIHAAVVRVG---LDLNVFVGN---------GLISMYGKC 185
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK--KVLKLNPD 478
G + EA +++D M + W +L++GC + +F +V K ++L L PD
Sbjct: 186 GCLVEACRVLDQMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPD 237
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR++F+++ R V ++ S+I AY + + L+++M + PD
Sbjct: 347 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 406
Query: 76 SSTFTVALKAC 86
S F L AC
Sbjct: 407 SIAFVSVLSAC 417
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 310/590 (52%), Gaps = 37/590 (6%)
Query: 1 MIKTNLSAYGNSVGRIIAL--YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKT L ++ ++I D+ A LF+ + +N +I S ESPF
Sbjct: 51 IIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPF 110
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L Y MI P+ TF K+C + G+++ ++LG ++ FV +S++
Sbjct: 111 LALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLI 170
Query: 119 NLYVKCGKM-------------------------------NEAMVAFEKMQRKDLVCWSS 147
N+Y + G++ +EA F+++ +D+V W++
Sbjct: 171 NMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNA 230
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS-RFGLSVHGYSIRR 206
MI+G +G+ EA+ ++ M++ + + M+ ++ ACA G S + G V + R
Sbjct: 231 MISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR 290
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
L ++++ L+DMY K G L+ AS++F+ + N+V+W +I G+ L L
Sbjct: 291 GLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLF 350
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY---TVRRFDFNLVLGTSVIDMYS 323
M +P+ V+ +S L ACA +G L LGK +H Y ++ + L TS+IDMY+
Sbjct: 351 RRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYA 410
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG + A+ +FD M ++ L +WN +I+ + +HGH + AL LF +M PD TF
Sbjct: 411 KCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVG 470
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L+A H+GL+ GR +F M+ YK+ P HY CM+DL RAG +EA +V +M +
Sbjct: 471 VLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMK 530
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P A+W +LL C H++ + E VAK + +L P++ + L+SN +A +WE+VA +R
Sbjct: 531 PDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIR 590
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ + MKKVPG S +EV+ +H F++ DK H Q +I +L ++ + +
Sbjct: 591 TRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRL 640
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 300/528 (56%), Gaps = 1/528 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARKLF+ +P + +N +I Y + + L+N+MI ++PD
Sbjct: 152 LVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPD 211
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TFT L + LK +EI V G DV++ S++++LY KC A F
Sbjct: 212 SITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFN 271
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V +++MI+G V NG ++A++ ++ + ++ + + + ++ ACA L +
Sbjct: 272 LSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKL 331
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY I+ L V +++++MYAK G LDLA +F +S + + W ++I+ F+Q
Sbjct: 332 GRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQ 391
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
+G + L +M G + D V++ +AL ACA I L GK IHG+ ++ F+ +L
Sbjct: 392 DGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFD 451
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++I+MY+KCG + AR +F+ MQ ++ ++WN IIA+YG HG+ ++L+LF M+E +
Sbjct: 452 MSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGI 511
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PDH TF ++LS+ H+G VE+G +F M +Y I +HYACM DL RAG ++EA
Sbjct: 512 QPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAF 571
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ SM P +VW LL C H + E ++ +L L P + G + L+++ A
Sbjct: 572 EVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAG 631
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
KW V ++ M++ G++KVPG S +EVN F D SH + I
Sbjct: 632 KWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQI 679
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 236/476 (49%), Gaps = 5/476 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I AR+ F+++ + +N +I Y + + L+ M+ + +PD
Sbjct: 51 LIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPD 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L S ++ G ++ V G VG++++ +Y K ++ +A F+
Sbjct: 111 SVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFD 170
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + DLV W+ MI G V NG +A + M GI D + + + A+ +
Sbjct: 171 MMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQ 230
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HGY +R + LDV + ++L+D+Y K +A +F ++ +IV + A+ISG+
Sbjct: 231 IKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVL 290
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG+ LE+ + P++++ S L ACA + +KLG+ +HGY ++ + +
Sbjct: 291 NGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPV 350
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+++++MY+KCG A +F ++ +D I WN II S+ G EEA+ LF QM V
Sbjct: 351 GSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGV 410
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K D T ++ LSA ++ + G+ M+ K + + ++++ A+ G++ A
Sbjct: 411 KYDCVTVSAALSACANIPALHYGKEIHGFMI-KGAFESDLFDMSALINMYAKCGKLNIA- 468
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
++V ++ E W ++++ H + + +L+ + PD + ++S+
Sbjct: 469 RLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 200/389 (51%), Gaps = 3/389 (0%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+ V PD TF +K C L ++++G+ I +E+G+ D+FV SS++ LY G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +A F+KM KD V W+ MING V G+ A+ +K M D V ++
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+G +HG +R L+ V +LV +Y+K L A +F M +I++V W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+I G+ QNG L EM S G +PDS++ S L + A+ LK K IHGY VR
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
++ L +++ID+Y KC A +F+ D++ + +I+ Y ++G ++AL +
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +++ + P+ TF+S+L A + ++ GR ++ K +++ + ++++ A
Sbjct: 301 FRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYII-KNELEEKCPVGSAIMNMYA 359
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ G ++ A I +S + + W ++++
Sbjct: 360 KCGRLDLAHLIFGRISIKDAIC-WNSIIT 387
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 150/286 (52%), Gaps = 5/286 (1%)
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ D+ +I+ C L + R G + + +LD+ V +SL+ +YA G ++ A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL-LACAQ 290
F M + V W +I+G+ Q G + S ++L +M S +PDSV+ L ++C++
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
++ G+ +HG VR DF ++G +++ +YSK AR LFD M DL+ WN +
Sbjct: 125 -AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRM 183
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I Y +G ++A LF +MI +KPD TF S L +L+ S +++ + +V
Sbjct: 184 IGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGV 243
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
I + A ++DL + + A K+ + +ST+ + ++ A++SG
Sbjct: 244 ILDVYLNSA-LIDLYFKCRDAVMACKMFN-LSTKFDIVIYTAMISG 287
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M CG PD + + C + ++LGK I + FD ++ + +S+I +Y+ G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR FD+M +D + WNV+I Y G + A+ LF M+ + KPD TFA +LS
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 388 LSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+VE GR L+V S P + +V + ++ ++ +A K+ D M + L
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGN--TLVTVYSKGRQLGDARKLFDMMP-QIDL 177
Query: 447 AVWVALLSG 455
VW ++ G
Sbjct: 178 VVWNRMIGG 186
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK + + +I +Y + AR +F + + +NSII AY +
Sbjct: 440 MIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADS 499
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLN 119
L L++ M++E ++PD TF L +C ++ G +R E G + + M +
Sbjct: 500 LALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMAD 559
Query: 120 LYVKCGKMNEAMVAFEKM 137
L+ + G ++EA M
Sbjct: 560 LFGRAGHLDEAFEVITSM 577
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 325/577 (56%), Gaps = 23/577 (3%)
Query: 1 MIKTNLSAYG------NS--VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS 52
M+ + AYG NS + ++A+YG + S++ L R + T+N+++ +
Sbjct: 219 MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDV 111
+ E E L +M+ E V PD T + L AC L L+ G+E+ A++ G +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
FVGS+++++Y C ++ F+ M + + W++MI G N +EA+ + M++
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 172 -GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
G+ A+ M G++ AC G ++HG+ ++R L+ D VQ +L+DMY++ G +D+
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-----------CGFEPDSV 279
A +F M ++VTW +I+G+ + L LL +MQ+ +P+S+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L++ L +CA + L GK IH Y ++ ++ +G++++DMY+KCG +R +FDQ+
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+++I+WNVII +YG+HG+G+EA+ L M+ VKP+ TF S+ +A SHSG+V+EG
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCH 457
F +M Y ++P+ HYAC+VDLL RAG ++EA ++++ M + A W +LL
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
H IGE A+ +++L P+ + L++N ++ W++ VR+ M++ G++K PG
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S +E E+H F+ D SH Q E + L+ L+ MR
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 207/406 (50%), Gaps = 14/406 (3%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND-VFVGSSM 117
E + Y MI ++PD+ F LKA L D+++G++I + GYG D V V +++
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+NLY KCG F+++ ++ V W+S+I+ L + A++A++ M E ++
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 178 VVMMGLIQACADLGDSR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
++ ++ AC++L G VH Y +R+ L+ + +LV MY K G L + +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
+ ++VTW ++S QN LE L EM G EPD ++ S L AC+ + L
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 295 KLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ GK +H Y ++ D N +G++++DMY C R +FD M R + WN +IA
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 353 YGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYK 409
Y + H +EAL LF+ M E+ + + +T A ++ A SG +E + F V K
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF---VVKRG 435
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++D+ +R G+++ A++I M + L W +++G
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 219/442 (49%), Gaps = 19/442 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY D + K+F+ + R ++NS+I + E L + M+ E+V P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 76 SSTFTVALKACVSLM---DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
S T + AC +L L MG+++ + G N F+ ++++ +Y K GK+ + V
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKV 257
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+DLV W+++++ L N Q EA++ + M EG++ DE + ++ AC+ L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 193 SRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H Y+++ L+ + V ++LVDMY + VF M I W A+I+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G++QN L L + M +S G +S ++ + AC + G ++IHG+ V+R D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--L 367
+ + +++DMYS+ G A +F +M+ RDL++WN +I Y H E+AL L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 368 QMIETMV---------KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
Q +E V KP+ T ++L + + + +G+ + K + +
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGS 556
Query: 419 CMVDLLARAGEVEEALKIVDSM 440
+VD+ A+ G ++ + K+ D +
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQI 578
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W ++ V + REAV Y M GI D L++A ADL D G +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 205 RRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ +D V V +LV++Y K G VF +S N V+W +LIS L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGF---LKLGKSIHGYTVRRFDFNLVLGTSVID 320
E M EP S +LVS + AC+ + L +GK +H Y +R+ + N + +++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY K G + ++ L RDL++WN +++S + EAL +M+ V+PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+L A SH ++ G+ + + + +VD+ +V ++ D M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 441 STEPGLAVWVALLSG 455
+ + +W A+++G
Sbjct: 365 -FDRKIGLWNAMIAG 378
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 287/503 (57%), Gaps = 5/503 (0%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE 104
N+II + SR + N+M+ + PD T + LKA + ++ G++I ++++
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 105 LG-YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G G +V+V ++++ LY CG +++ F++ +DLV W+++I G AV+
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL--DVKVQTSLVDM 221
A+ M + AD ++ ++ AC++LGD G VH Y IR ++++ DV V +L+DM
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSY-IRHYIDMKADVFVGNALLDM 257
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y K L+ A VF M N+VTW A+ISG A G L+ MQ G +PD V+L
Sbjct: 258 YLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTL 317
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
V L +CA +G L++GK +H Y R + +G +++DMY+KCG A +F+ M+
Sbjct: 318 VGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKR 377
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RD+ S+ +I +HG A +F +M ++P+ TF LL A SH GLV EG+ +
Sbjct: 378 RDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKY 437
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F M KYK++P +HY CM+DLL RAG V+EA +I+ M P + ALL C H
Sbjct: 438 FFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHG 497
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
IGE V +K+ +L+PD+ G + L++N ++ +W++ +RKTM+ M+K PG S++
Sbjct: 498 NVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLI 557
Query: 521 EVNGELHAFIMEDKSHNQYEDIV 543
EV+G +H F DKSH + + I+
Sbjct: 558 EVDGVVHEFRKGDKSHPRSKVII 580
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 220/400 (55%), Gaps = 17/400 (4%)
Query: 2 IKTNLSAYG----NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
IKT + + N++ R+ ++ G +D+ +K+F+E P R + ++ ++I A+++
Sbjct: 137 IKTGMVGFNVYVSNTLMRLYSVCGSIHDV---QKVFDECPHRDLVSWTTLIQAFTKAGLY 193
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVG 114
+ + +M +R D T V L AC +L DL +G+++ R +++ DVFVG
Sbjct: 194 SRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDM--KADVFVG 251
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+++L++Y+KC +N A F++M K++V W++MI+GL + G+ REA+D ++ M+ +G+
Sbjct: 252 NALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVK 311
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
DEV ++G++ +CA+LG G VH Y R H+ D V +L+DMYAK G +D A V
Sbjct: 312 PDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRV 371
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F++M R ++ ++ A+I G A +G A ++ EM G EP+ V+ + L+AC+ G +
Sbjct: 372 FESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLV 431
Query: 295 KLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIA 351
GK ++ +ID+ + G+ A + +M+ R D+ + ++
Sbjct: 432 AEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLG 491
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
+ IHG+ + S+ ++ E + PD L++ L S
Sbjct: 492 ACRIHGNVDIGESVMQKLTE--LDPDEEGTYILMTNLYSS 529
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 307/573 (53%), Gaps = 14/573 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K A +I+ Y N I A +F +P + ++NS+I S E
Sbjct: 443 IVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEA 502
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M + DS T L AC G + +V+ G + + +++L++
Sbjct: 503 IELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y C F M +K++V W++MI + G + + M +GI D +
Sbjct: 563 YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAV 622
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ A A + G SVHGY+IR + + V +L++MY K +++ A +F ++
Sbjct: 623 TSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTN 682
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++++W LI G+++N + L +M F P++V++ L A A I L+ G+ I
Sbjct: 683 KDVISWNTLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREI 741
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y +RR F + +++DMY KCG AR LFD++ ++LISW ++IA YG+HG G
Sbjct: 742 HAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFG 801
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ A++LF QM + ++PD ++F+++L A HSGL EGR +F M +YKI+P KHY C
Sbjct: 802 KHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTC 861
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL+R G+++EAL+ ++SM EP ++WV+LL GC HK + EKVA KV KL P++
Sbjct: 862 IVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPEN 921
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G + L++N +A ++WE V ++ + G+++ GYS +EV ++H FI ++++H +
Sbjct: 922 TGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDW 981
Query: 540 EDIVYVLKKLYLEMRAISSWLQGHMEEHEEHDP 572
I L + MR E HDP
Sbjct: 982 NRIAEFLDDVARRMR------------QEGHDP 1002
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 247/481 (51%), Gaps = 17/481 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ +Y D+ SAR++F+ + +G V +N I+ Y++ E L L+ QM + +
Sbjct: 355 KLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIA 414
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD + LK L + G V+LG+G V +++++ Y K + +A++
Sbjct: 415 PDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLV 474
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +M R+D + W+S+I+G NG EA++ + RM +G + D V ++ ++ ACA S
Sbjct: 475 FNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ---S 531
Query: 194 RF---GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
R+ G VHGYS++ L + + +L+DMY+ + +F++M + N+V+W A+I
Sbjct: 532 RYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMI 591
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+ + + GL LL EM G PD ++ SAL A A LK GKS+HGYT+R +
Sbjct: 592 TSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGME 651
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L + ++++MY KC AR +FD++ ++D+ISWN +I Y + E+ SLF M
Sbjct: 652 KLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM 711
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARA 427
+ +P+ T +L A + +E GR ++ + E YA +VD+ +
Sbjct: 712 L-LQFRPNAVTMTCILPAAASISSLERGR---EIHAYALRRGFLEDSYASNALVDMYVKC 767
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
G + A + D + T+ L W +++ G H K +I + + PD A+
Sbjct: 768 GALLVARVLFDRL-TKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAI 826
Query: 486 V 486
+
Sbjct: 827 L 827
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 256/525 (48%), Gaps = 37/525 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
R++ Y D+ AR +F+ +P + D + S++ AY++ E + L+ QM V
Sbjct: 141 RLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGV 200
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD+ + LK SL L GE I +LG G V ++++ +Y +CG+M +A
Sbjct: 201 SPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAAR 260
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D + W+SMI G NG AVD + +M +G + V ++ ++ ACA LG
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320
Query: 193 SRFGLSVHGYSIRRHLNL----------DVKVQTSLVDMYAKTGHLDLASHVFKNM-SRI 241
G +VHGYS++ L D + + LV MY K G + A VF M S+
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG 380
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ-IGFLKLGKSI 300
N+ W ++ G+A+ G +L L ++M G PD + +S LL C + + G
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHA-ISCLLKCITCLSCARDGLVA 439
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HGY V+ F + ++I Y+K + A +F++M +D ISWN +I+ +G
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQP---TEK 415
EA+ LF++M + D T S+L A + S RYWF +V Y ++ E
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQS------RYWFAGRVVHGYSVKTGLIGET 553
Query: 416 HYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA----K 470
A ++D+ + + + +I SM + + W A+++ ++ + + +KVA +
Sbjct: 554 SLANALLDMYSNCSDWQSTNQIFRSMG-QKNVVSWTAMIT---SYMRAGLFDKVAGLLQE 609
Query: 471 KVLK-LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKV 514
VL + PD + + + + FA ++ ++ V ++GM+K+
Sbjct: 610 MVLDGIRPDVFAVTSAL-HAFAGDESLKQGKSVHGYTIRNGMEKL 653
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 191/368 (51%), Gaps = 20/368 (5%)
Query: 108 GNDVFVGSSMLNLYVKCGKMNEAMVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAY 165
G +G ++ Y+KCG + EA F+ M Q D+ W+S+++ G +EAV +
Sbjct: 133 GKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLF 192
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
++M+ G+ D + +++ + LG G +HG + L V +L+ +Y++
Sbjct: 193 RQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRC 252
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G ++ A+ VF +M + ++W ++I G NG G+ ++L +M S G E SV+++S L
Sbjct: 253 GRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVL 312
Query: 286 LACAQIGFLKLGKSIHGYTVRRFDF-----------NLVLGTSVIDMYSKCGVPSCARAL 334
ACA +G+ +GK++HGY+V+ + LG+ ++ MY KCG + AR +
Sbjct: 313 PACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRV 372
Query: 335 FDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
FD M S+ + WN+I+ Y G EE+LSLF+QM E + PD + LL ++
Sbjct: 373 FDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSC 432
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
+G +V K+ + C ++ A++ + +A+ + + M + ++ W +
Sbjct: 433 ARDGLVAHGYIV---KLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTIS-WNS 488
Query: 452 LLSGCHNH 459
++SGC ++
Sbjct: 489 VISGCSSN 496
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 325/577 (56%), Gaps = 23/577 (3%)
Query: 1 MIKTNLSAYG------NS--VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS 52
M+ + AYG NS + ++A+YG + S++ L R + T+N+++ +
Sbjct: 219 MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDV 111
+ E E L +M+ E V PD T + L AC L L+ G+E+ A++ G +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
FVGS+++++Y C ++ F+ M + + W++MI G N +EA+ + M++
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 172 -GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
G+ A+ M G++ AC G ++HG+ ++R L+ D VQ +L+DMY++ G +D+
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-----------CGFEPDSV 279
A +F M ++VTW +I+G+ + L LL +MQ+ +P+S+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L++ L +CA + L GK IH Y ++ ++ +G++++DMY+KCG +R +FDQ+
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+++I+WNVII +YG+HG+G+EA+ L M+ VKP+ TF S+ +A SHSG+V+EG
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCH 457
F +M Y ++P+ HYAC+VDLL RAG ++EA ++++ M + A W +LL
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
H IGE A+ +++L P+ + L++N ++ W++ VR+ M++ G++K PG
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S +E E+H F+ D SH Q E + L+ L+ MR
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 207/406 (50%), Gaps = 14/406 (3%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND-VFVGSSM 117
E + Y MI ++PD+ F LKA L D+++G++I + GYG D V V +++
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+NLY KCG F+++ ++ V W+S+I+ L + A++A++ M E ++
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 178 VVMMGLIQACADLGDSR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
++ ++ AC++L G VH Y +R+ L+ + +LV MY K G L + +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
+ ++VTW ++S QN LE L EM G EPD ++ S L AC+ + L
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 295 KLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ GK +H Y ++ D N +G++++DMY C R +FD M R + WN +IA
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 353 YGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYK 409
Y + H +EAL LF+ M E+ + + +T A ++ A SG +E + F V K
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF---VVKRG 435
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++D+ +R G+++ A++I M + L W +++G
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 219/442 (49%), Gaps = 19/442 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY D + K+F+ + R ++NS+I + E L + M+ E+V P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 76 SSTFTVALKACVSLM---DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
S T + AC +L L MG+++ + G N F+ ++++ +Y K GK+ + V
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKV 257
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+DLV W+++++ L N Q EA++ + M EG++ DE + ++ AC+ L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 193 SRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H Y+++ L+ + V ++LVDMY + VF M I W A+I+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G++QN L L + M +S G +S ++ + AC + G ++IHG+ V+R D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--L 367
+ + +++DMYS+ G A +F +M+ RDL++WN +I Y H E+AL L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 368 QMIETMV---------KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
Q +E V KP+ T ++L + + + +G+ + K + +
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGS 556
Query: 419 CMVDLLARAGEVEEALKIVDSM 440
+VD+ A+ G ++ + K+ D +
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQI 578
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W ++ V + REAV Y M GI D L++A ADL D G +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 205 RRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ +D V V +LV++Y K G VF +S N V+W +LIS L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGF---LKLGKSIHGYTVRRFDFNLVLGTSVID 320
E M EP S +LVS + AC+ + L +GK +H Y +R+ + N + +++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY K G + ++ L RDL++WN +++S + EAL +M+ V+PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+L A SH ++ G+ + + + +VD+ +V ++ D M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 441 STEPGLAVWVALLSG 455
+ + +W A+++G
Sbjct: 365 -FDRKIGLWNAMIAG 378
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 313/602 (51%), Gaps = 61/602 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMI---- 68
++A+Y + A +F+E+ RG+D ++NSI+ A+ + + + L L+++M
Sbjct: 196 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVH 255
Query: 69 --KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ R D + L AC SL + +E+ A+ G DVFVG+++++ Y KCG
Sbjct: 256 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGL 315
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV------- 179
M A+ F M+ KD+V W++M+ G +G A + +K M+KE I D V
Sbjct: 316 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 375
Query: 180 ----------------------------MMGLIQACADLGDSRFGLSVHGYSIRRHL--- 208
++ ++ ACA LG G +H YS++ L
Sbjct: 376 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 435
Query: 209 -------NLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLA 259
+ D+ V +L+DMY+K A +F + + N+VTW +I G AQ G +
Sbjct: 436 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 495
Query: 260 GSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---LVL 314
L+L +EM + G P++ ++ L+ACA + +++GK IH Y +R + +
Sbjct: 496 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 555
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSKCG AR +FD M + ISW ++ YG+HG G EAL +F +M +
Sbjct: 556 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 615
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +L A SH G+V++G +FD M + Y + P +HYAC +DLLAR+G +++A
Sbjct: 616 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAW 675
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M EP VWVALLS C H + E K++++N ++ G + L+SN +A
Sbjct: 676 RTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 735
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++VA +R M+KSG+KK PG S V+ +F + D+SH I +L+ L ++
Sbjct: 736 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 795
Query: 555 AI 556
A+
Sbjct: 796 AM 797
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 236/477 (49%), Gaps = 63/477 (13%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+M++ RPD T LKAC L + G G+ ++VF+ ++++ +Y +CG
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204
Query: 126 KMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRM------KKEGIDAD 176
+ EA + F+++ ++ D++ W+S+++ V + A+D + +M K +D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------------ 224
+ ++ ++ AC L VHG +IR DV V +L+D YAK
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 225 -------------------TGHLDLASHVFKNMSRINI----VTWGALISGFAQNGLAGS 261
+G+ + A +FKNM + NI VTW A+I+G++Q G +
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-----------DF 310
L L +M G P+ V+++S L ACA +G G IH Y+++ D
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+L++ ++IDMYSKC AR++FD ++ R++++W V+I + +G +AL LF++
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504
Query: 369 MIETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLA 425
MI V P+ T + +L A +H + G+ ++ ++ + + A C++D+ +
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
+ G+V+ A + DSMS + ++ W ++++G H + S + K+ K PDD+
Sbjct: 565 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 620
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 155/303 (51%), Gaps = 10/303 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+ ++ Y+ CG + A++ E++ V W+ +I + G+ A++ RM + G
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
D + +++AC +L R G + HG +V + +LV MY++ G L+ AS
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 233 HVFKNMSRI---NIVTWGALISGFAQNGLAGSTLELLMEM------QSCGFEPDSVSLVS 283
+F +++ ++++W +++S ++ A + L+L +M + D +S+V+
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC + + K +HG +R F ++ +G ++ID Y+KCG+ A +F+ M+ +D
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SWN ++A Y G+ E A LF M + + D T+ ++++ S G E F
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 403 LMV 405
M+
Sbjct: 391 QMI 393
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 305/540 (56%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + A +LF +P + T+N +I + + L L+ M K ++PD
Sbjct: 289 LVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPD 348
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L A L K G+EI V DVF+ S+++++Y KC + A F+
Sbjct: 349 SVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFD 408
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+V S+MI+G V N AV ++ + GI + V++ + ACA + R
Sbjct: 409 ATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRI 468
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY ++ V+++L+DMY+K G LDL+ ++F MS + VTW ++IS FAQ
Sbjct: 469 GQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQ 528
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG L+L +M G + ++V++ S L ACA + + GK IHG ++ +L
Sbjct: 529 NGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFA 588
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMY KCG A +F+ M ++ +SWN II++YG HG +E++ L M E
Sbjct: 589 ESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGF 648
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K DH TF +L+SA +H+G V+EG F M +Y I+P +H +CMVDL +RAG++++A+
Sbjct: 649 KADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAM 708
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M +P +W ALL C H+ + E ++++ KL+P + G + L+SN A+
Sbjct: 709 QFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAG 768
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V+ +R+ M+ ++K+PGYS V+VN H F+ DK+H E+I LK L +E++
Sbjct: 769 RWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELK 828
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 252/475 (53%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR++F+ + R +N ++ Y + +GL+ M P+
Sbjct: 188 LIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPN 247
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C + DL G ++ AV+ G +V V ++++++Y KC + EA F
Sbjct: 248 FATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFG 307
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M R DLV W+ MI+G V NG +A+ + M+K G+ D V + L+ A +L +
Sbjct: 308 LMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQ 367
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY +R ++DV + ++LVD+Y K + +A +VF I++V +ISG+
Sbjct: 368 GKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVL 427
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N ++ + +++ + + G +P++V + S L ACA + +++G+ +HGY ++ ++ +
Sbjct: 428 NRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYV 487
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMYSKCG + +F +M ++D ++WN +I+S+ +G EEAL LF QMI V
Sbjct: 488 ESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGV 547
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K ++ T +S+LSA + + G+ +++ K I+ + ++D+ + G +E AL
Sbjct: 548 KYNNVTISSILSACAGLPAIYYGKEIHGIII-KGPIRADLFAESALIDMYGKCGNLELAL 606
Query: 435 KIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
++ + M E W +++S G H K S+ + D + AL+S
Sbjct: 607 RVFEHM-PEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALIS 660
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 196/403 (48%), Gaps = 33/403 (8%)
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD T +K+C +L L +G + R LG D++VGS+++ +Y G ++ A
Sbjct: 144 RPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGARE 203
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D V W+ M++G V G AV ++ M+ G D + + + CA D
Sbjct: 204 VFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEAD 263
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H +++ L +V V +LV MYAK L+ A +F M R ++VTW +ISG
Sbjct: 264 LLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISG 323
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFN 311
QNGL L L +MQ G +PDSV+L S L A ++ K GK IHGY VR +
Sbjct: 324 CVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVD 383
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ L ++++D+Y KC A+ +FD +S D++ + +I+ Y ++ E A+ +F ++
Sbjct: 384 VFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLA 443
Query: 372 TMVKPDHSTFASLLSALSHSGLVE--------------EGRYW--------------FDL 403
+KP+ AS L A + + EGR + DL
Sbjct: 444 LGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDL 503
Query: 404 ---MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
M SK + E + M+ A+ GE EEAL + M E
Sbjct: 504 SHYMFSKMSAK-DEVTWNSMISSFAQNGEPEEALDLFRQMIME 545
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 185/353 (52%), Gaps = 3/353 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ +Y D+ A+ +F+ V +++I Y + ++ ++ +
Sbjct: 387 VSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGI 446
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P++ L AC S+ +++G+E+ ++ Y +V S+++++Y KCG+++ +
Sbjct: 447 KPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHY 506
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F KM KD V W+SMI+ NG+P EA+D +++M EG+ + V + ++ ACA L
Sbjct: 507 MFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPA 566
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G +HG I+ + D+ +++L+DMY K G+L+LA VF++M N V+W ++IS
Sbjct: 567 IYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISA 626
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+ +GL +++LL MQ GF+ D V+ ++ + ACA G ++ G + +
Sbjct: 627 YGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEP 686
Query: 313 VLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
+ + ++D+YS+ G A M + D W ++ + +H + E A
Sbjct: 687 QVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELA 739
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 309/541 (57%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+++ARK+F+ + + ++N++I + L L+ M+ ++V+P+
Sbjct: 230 LMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPN 289
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T A L D+ +E+ AV+ G+ DV +S++ +Y G M +A F
Sbjct: 290 LMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFS 349
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D + W++MI+G NG P +A++ Y M+ + D++ + + ACA LG
Sbjct: 350 RMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDV 409
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H + + + V ++++MYAK+ +D A VFK M ++V+W ++I+GF
Sbjct: 410 GVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCF 469
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N L M + +P+SV+ ++AL ACA G L+ GK IH + +R ++ L
Sbjct: 470 NHRNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYL 528
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++ID+Y KCG A A F ++D++SWN++IA + HGHG+ ALS F QM++
Sbjct: 529 PNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGE 588
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LL A S G+V EG F M KY I P KHYACMVDLL+RAG++ EA
Sbjct: 589 CPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAY 648
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ M P AVW ALL+GC H+ +GE AK VL L P+D G H L+ + +A
Sbjct: 649 NFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADAC 708
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W+++A VRKTMR+ G+ G S VEV G +HAF+ +D+SH Q +I VL+ +Y M+
Sbjct: 709 LWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMK 768
Query: 555 A 555
A
Sbjct: 769 A 769
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 194/373 (52%), Gaps = 5/373 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ ++ +G + A ++F ++P R V ++N ++ Y + E L LY++M+
Sbjct: 126 GNAMLSMLVRFG---ETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
VRPD TF L++C + D +MG E+ + G+G +V V ++++ +Y KCG +
Sbjct: 183 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMA 242
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M D + W++MI G NG+ ++ + M + + + + + + A
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L D F +HG +++R DV SL+ MYA G + A VF M + +TW A+
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NG LE+ M+ PD +++ SAL ACA +G L +G +H + F
Sbjct: 363 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 422
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ ++++MY+K A +F M +D++SW+ +IA + + EAL F
Sbjct: 423 ISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRH 482
Query: 369 MIETMVKPDHSTF 381
M+ VKP+ TF
Sbjct: 483 MLAD-VKPNSVTF 494
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 205/402 (50%), Gaps = 26/402 (6%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-----YGND------VFVGSSMLNLYV 122
PD + + C WR+AVE G + +D + +G++ML++ V
Sbjct: 86 PDEDAYVALFRLCE-----------WRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLV 134
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ G+ A F KM +D+ W+ M+ G +G EA+D Y RM G+ D
Sbjct: 135 RFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPC 194
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++++C + D R G VH + +R +V V +L+ MYAK G + A VF +M+ ++
Sbjct: 195 VLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMD 254
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W A+I+G +NG + LEL + M +P+ +++ S +A + + K +HG
Sbjct: 255 CISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHG 314
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
V+R F ++ S+I MY+ G+ AR +F +M +RD ++W +I+ Y +G ++
Sbjct: 315 LAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK 374
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
AL ++ M V PD T AS L+A + G ++ G +L SK I A ++
Sbjct: 375 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNA-IL 433
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKF 462
++ A++ +++A+++ M E + W ++++G C NH+ F
Sbjct: 434 EMYAKSKRIDKAIEVFKCMH-EKDVVSWSSMIAGFCFNHRNF 474
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 297/508 (58%), Gaps = 5/508 (0%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+++ Y+ + P +Y +++K+ PD TF LK+C + + G ++ +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
++G+ +++V +S+++ Y C + +A F++M +D+V W+ +I+G V G EAV
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ RM ++ + + ++ AC G G +HG S + + ++V +L+DMY
Sbjct: 122 LFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G L A VF ++ +IV+W ++ISG Q LEL +MQS G EPD + L S
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTS 238
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L ACA++G L G+ +H + R+ +++ +GT+++DMY+KCG + +F+ M ++
Sbjct: 239 VLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKN 298
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+++WN ++ +HGH + L LF +M+ ++P+ TF ++L+A H GLV EGR +F+
Sbjct: 299 VLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFN 358
Query: 403 LMV-SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
M +Y + P +HY CMVDLL RA ++EAL++ +M P + + ALLS C +
Sbjct: 359 WMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGN 418
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+ +++ + ++L+ D G++ L+SN A+ Q+W++V +R+ M++ G+KK PG +V+E
Sbjct: 419 TELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIE 478
Query: 522 VNGELHAFIMEDKSHNQYEDIVYVLKKL 549
++G+ H FI+ D H Q + I +LK L
Sbjct: 479 LDGKAHEFIVGDTRHPQDKRIRLLLKIL 506
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 161/271 (59%), Gaps = 3/271 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F+E+ +R V ++ +I Y R E +GL+ +M DV P+++TF L AC
Sbjct: 88 ASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRM---DVEPNAATFVSVLVACGR 144
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +G+ I + + +G + V ++++++YVKCG + A F+++ KD+V W+S+
Sbjct: 145 KGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSI 204
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+GLV P+EA++ ++ M+ GI+ D +++ ++ ACA LG +G VH + R+ +
Sbjct: 205 ISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAI 264
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D+++ T++VDMYAK G ++++ +F M N++TW AL++G A +G A LEL E
Sbjct: 265 KWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEE 324
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
M G P+ V+ ++ L AC G + G+
Sbjct: 325 MVRVGMRPNEVTFLAILTACCHCGLVNEGRQ 355
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I + ++F +P + V T+N+++ + ++VL L+ +M++ +RP+
Sbjct: 274 MVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPN 333
Query: 76 SSTFTVALKACVSLMDLKMGEEI--WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
TF L AC + G + W K + + M++L + ++EA+
Sbjct: 334 EVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALEL 393
Query: 134 FEKMQ-RKDLVCWSSMINGLVFNGQ---PREAVDAY 165
+ M D+ ++++ NG P+E +D +
Sbjct: 394 TKAMPMSPDVRIMGALLSACKENGNTELPQEILDRF 429
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 313/602 (51%), Gaps = 61/602 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMI---- 68
++A+Y + A +F+E+ RG+D ++NSI+ A+ + + + L L+++M
Sbjct: 203 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVH 262
Query: 69 --KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ R D + L AC SL + +E+ A+ G DVFVG+++++ Y KCG
Sbjct: 263 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGL 322
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV------- 179
M A+ F M+ KD+V W++M+ G +G A + +K M+KE I D V
Sbjct: 323 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 382
Query: 180 ----------------------------MMGLIQACADLGDSRFGLSVHGYSIRRHL--- 208
++ ++ ACA LG G +H YS++ L
Sbjct: 383 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 442
Query: 209 -------NLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLA 259
+ D+ V +L+DMY+K A +F + + N+VTW +I G AQ G +
Sbjct: 443 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 502
Query: 260 GSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---LVL 314
L+L +EM + G P++ ++ L+ACA + +++GK IH Y +R + +
Sbjct: 503 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 562
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSKCG AR +FD M + ISW ++ YG+HG G EAL +F +M +
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 622
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +L A SH G+V++G +FD M + Y + P +HYAC +DLLAR+G +++A
Sbjct: 623 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAW 682
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M EP VWVALLS C H + E K++++N ++ G + L+SN +A
Sbjct: 683 RTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 742
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++VA +R M+KSG+KK PG S V+ +F + D+SH I +L+ L ++
Sbjct: 743 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 802
Query: 555 AI 556
A+
Sbjct: 803 AM 804
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 236/477 (49%), Gaps = 63/477 (13%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+M++ RPD T LKAC L + G G+ ++VF+ ++++ +Y +CG
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211
Query: 126 KMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRM------KKEGIDAD 176
+ EA + F+++ ++ D++ W+S+++ V + A+D + +M K +D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------------ 224
+ ++ ++ AC L VHG +IR DV V +L+D YAK
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 225 -------------------TGHLDLASHVFKNMSRINI----VTWGALISGFAQNGLAGS 261
+G+ + A +FKNM + NI VTW A+I+G++Q G +
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-----------DF 310
L L +M G P+ V+++S L ACA +G G IH Y+++ D
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+L++ ++IDMYSKC AR++FD ++ R++++W V+I + +G +AL LF++
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511
Query: 369 MIETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLA 425
MI V P+ T + +L A +H + G+ ++ ++ + + A C++D+ +
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
+ G+V+ A + DSMS + ++ W ++++G H + S + K+ K PDD+
Sbjct: 572 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 627
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 155/303 (51%), Gaps = 10/303 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+ ++ Y+ CG + A++ E++ V W+ +I + G+ A++ RM + G
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
D + +++AC +L R G + HG +V + +LV MY++ G L+ AS
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 233 HVFKNMSRI---NIVTWGALISGFAQNGLAGSTLELLMEM------QSCGFEPDSVSLVS 283
+F +++ ++++W +++S ++ A + L+L +M + D +S+V+
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC + + K +HG +R F ++ +G ++ID Y+KCG+ A +F+ M+ +D
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SWN ++A Y G+ E A LF M + + D T+ ++++ S G E F
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 403 LMV 405
M+
Sbjct: 398 QMI 400
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 307/562 (54%), Gaps = 32/562 (5%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ AR +F+ +P +N++I YSR P + +Y +M++ V PD T+ LK
Sbjct: 68 DMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLK 127
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+K G E+ V+LG+ ++VFV +++++LY G+++ A F++ + D+V
Sbjct: 128 RFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVT 187
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ MI+G + Q E++ + M++ + + ++ ++ AC+ L D G VH Y
Sbjct: 188 WNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVK 247
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG---- 260
+ ++ +L+DMYA G +D A +F NM ++++W A+++GF G G
Sbjct: 248 DLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARN 307
Query: 261 ---------------------------STLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
L L EMQ+ +PD ++VS L ACA +G
Sbjct: 308 YFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGA 367
Query: 294 LKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+LG+ I Y + + +G ++IDMY CG A +F+ M RD ISW +I
Sbjct: 368 LELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
I+G+GEEAL +F QM++ + PD T +L A +HSG+V++G+ +F M +++ I+P
Sbjct: 428 LAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEP 487
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
HY CMVDLL RAG ++EA +++ +M +P VW +LL C H+ + E A+++
Sbjct: 488 NVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQI 547
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
L+L P++ ++ L+ N +A +WE++ VRK M G+KK PG S++E+NG +H F+
Sbjct: 548 LELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAG 607
Query: 533 DKSHNQYEDIVYVLKKLYLEMR 554
D+ H Q ++I L ++ ++++
Sbjct: 608 DQVHPQSKEIYSKLDEMSVDLK 629
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 197/407 (48%), Gaps = 39/407 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK--CGKMNEAMVAFEKMQRK 140
+K C S+ LK +I + + G ++ V + ++ K G M A + F+ M
Sbjct: 26 IKTCKSMAQLK---QIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ W++MI G G P AV Y M + G+ DE L++ + G +H
Sbjct: 83 NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+ ++ + +V VQ +L+ +Y+ +G + +A VF S+ ++VTW +ISG+ ++
Sbjct: 143 DHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD 202
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVI 319
+++L EM+ P S++LVS L AC+++ L +GK +H Y + + VL ++I
Sbjct: 203 ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALI 262
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG------------------------- 354
DMY+ CG A +FD M+SRD+ISW I+ +
Sbjct: 263 DMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTA 322
Query: 355 -IHGHGE-----EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
I G+ + E LSLF +M +KPD T S+L+A +H G +E G W + K
Sbjct: 323 MIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGE-WIKAYIDKN 381
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+I+ ++D+ G VE+A++I ++M ++ W A++ G
Sbjct: 382 EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKIS-WTAVIFG 427
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 36/407 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR +F+ V T+N +I Y+R + E + L+++M + V P
Sbjct: 160 LIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPS 219
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC L DL +G+ + R +L + ++++++Y CG M+ A+ F+
Sbjct: 220 SITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFD 279
Query: 136 KMQRKDLVCWSSMINGLV-----------FNGQP--------------------REAVDA 164
M+ +D++ W++++ G F+ P +E +
Sbjct: 280 NMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSL 339
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
++ M+ I DE M+ ++ ACA LG G + Y + + +D V +L+DMY
Sbjct: 340 FREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFN 399
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G+++ A +F M + ++W A+I G A NG L++ +M PD V+ +
Sbjct: 400 CGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGV 459
Query: 285 LLACAQIGFLKLGKSIHG--YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR- 341
L AC G + GK T + N+ ++D+ + G A + M +
Sbjct: 460 LCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKP 519
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ I W ++ + +H E A Q++E ++P++ LL +
Sbjct: 520 NSIVWGSLLGACRVHRDEEMAEMAAQQILE--LEPENGAVYVLLCNI 564
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 306/541 (56%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-RP 74
+I++Y + + A +F + ++ + ++ S+I +S+ E L + +M+ + V +P
Sbjct: 240 LISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQP 299
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F A AC L++ G +I ++ G G+D+F G S+ ++Y KCG + A F
Sbjct: 300 NEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVF 359
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+++I G +E+ + +M+ G+ ++V ++ L+ AC++
Sbjct: 360 YHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLN 419
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGF 253
G+ VH Y ++ NLD+ V SL+ MY+K +L+ A VF+++ ++ +IV+W L++
Sbjct: 420 HGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC 479
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q AG L L M + +PD V+L + L++ QI ++G IH + ++ + ++
Sbjct: 480 LQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDI 539
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I+MY+KCG CAR +FD + + D+ISW+ +I Y G G+EA LF M
Sbjct: 540 SVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGL 599
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF +L+A SH G+VEEG + M Y+I PT++H +CMVDLLARAG ++
Sbjct: 600 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDV 659
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + M P + VW LL+ C H +G++ A+ VLK++P + ++ N A
Sbjct: 660 AEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHAS 719
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W++ A +R +MR+ + KVPG S +E+ ++H F+ ED H + I +L++L L+
Sbjct: 720 SGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQ 779
Query: 553 M 553
+
Sbjct: 780 I 780
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 226/445 (50%), Gaps = 5/445 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
I+++YG + AR +F+ +PL+ V ++ S+I YSR + LY QM++
Sbjct: 137 NHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI 196
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF +K+C L D K+ ++ ++ +G D+ ++++++Y K +M +A+
Sbjct: 197 PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINV 256
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGD 192
F ++ KDL+ W SMI G G EA+ ++ M + + +E V AC+ L +
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG I+ L D+ SL DMYAK G L+ A VF ++ + ++V W A+I+G
Sbjct: 317 PDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
FA A + +M+ G P+ V+++S L AC++ L G +H Y V+ F+ +
Sbjct: 377 FASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLD 436
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ + S++ MYSKC + A +F+ + ++ D++SWN ++ + E L L M
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +KPDH T ++L + E G + K + ++++ + G +
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQ-IHCFIMKSGLNLDISVSNALINMYTKCGSL 555
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E A K+ DS+ P + W +L+ G
Sbjct: 556 ECARKMFDSIGN-PDIISWSSLIVG 579
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 239/503 (47%), Gaps = 27/503 (5%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP-DSSTFTVALKACVSLMD 91
F PL ++ II+ +K E L ++ K P S T+T + AC SL
Sbjct: 54 FSPCPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRS 113
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L+ G +I R + Y D+ + + +L++Y KCG + EA F+ M K++V W+SMI+G
Sbjct: 114 LEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISG 173
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
G+ A+ Y +M + G D ++++C+ L D + +H + ++ D
Sbjct: 174 YSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGAD 233
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ Q +L+ MY K + A +VF + ++++WG++I+GF+Q G L EM S
Sbjct: 234 LIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLS 293
Query: 272 CG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
++P+ SA AC+++ G+ IHG ++ +L G S+ DMY+KCG
Sbjct: 294 QSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLE 353
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR +F ++ DL++WN IIA + + +E+ S F QM T + P+ T SLL A S
Sbjct: 354 SARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACS 413
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
++ G +V K ++ + ++ + +AL++ + + + + W
Sbjct: 414 EPVMLNHGIQVHSYIV-KMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
LL+ C + + A +VL+ L FA K + V + + S
Sbjct: 473 NTLLTAC-------LQQNQAGEVLR----------LTKLMFASRIKPDHVT-LTNVLVSS 514
Query: 510 GMKKVPGYSVVEVNGELHAFIME 532
G ++ Y EV ++H FIM+
Sbjct: 515 G--QIASY---EVGSQIHCFIMK 532
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 306/541 (56%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-RP 74
+I++Y + + A +F + ++ + ++ S+I +S+ E L + +M+ + V +P
Sbjct: 240 LISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQP 299
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F A AC L++ G +I ++ G G+D+F G S+ ++Y KCG + A F
Sbjct: 300 NEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVF 359
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+++I G +E+ + +M+ G+ ++V ++ L+ AC++
Sbjct: 360 YHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLN 419
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGF 253
G+ VH Y ++ NLD+ V SL+ MY+K +L+ A VF+++ ++ +IV+W L++
Sbjct: 420 HGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC 479
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q AG L L M + +PD V+L + L++ QI ++G IH + ++ + ++
Sbjct: 480 LQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDI 539
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I+MY+KCG CAR +FD + + D+ISW+ +I Y G G+EA LF M
Sbjct: 540 SVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGL 599
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+ TF +L+A SH G+VEEG + M Y+I PT++H +CMVDLLARAG ++
Sbjct: 600 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDV 659
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + M P + VW LL+ C H +G++ A+ VLK++P + ++ N A
Sbjct: 660 AEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHAS 719
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W++ A +R +MR+ + KVPG S +E+ ++H F+ ED H + I +L++L L+
Sbjct: 720 SGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQ 779
Query: 553 M 553
+
Sbjct: 780 I 780
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 226/445 (50%), Gaps = 5/445 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
I+++YG + AR +F+ +PL+ V ++ S+I YSR + LY QM++
Sbjct: 137 NHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI 196
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF +K+C L D K+ ++ ++ +G D+ ++++++Y K +M +A+
Sbjct: 197 PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINV 256
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGD 192
F ++ KDL+ W SMI G G EA+ ++ M + + +E V AC+ L +
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG I+ L D+ SL DMYAK G L+ A VF ++ + ++V W A+I+G
Sbjct: 317 PDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
FA A + +M+ G P+ V+++S L AC++ L G +H Y V+ F+ +
Sbjct: 377 FASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLD 436
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ + S++ MYSKC + A +F+ + ++ D++SWN ++ + E L L M
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +KPDH T ++L + E G + K + ++++ + G +
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQ-IHCFIMKSGLNLDISVSNALINMYTKCGSL 555
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E A K+ DS+ P + W +L+ G
Sbjct: 556 ECARKMFDSIGN-PDIISWSSLIVG 579
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 242/510 (47%), Gaps = 41/510 (8%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP-DSSTFTVALKACVSLMD 91
F PL ++ II+ +K E L ++ K P S T+T + AC SL
Sbjct: 54 FSPCPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRS 113
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L+ G +I R + Y D+ + + +L++Y KCG + EA F+ M K++V W+SMI+G
Sbjct: 114 LEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISG 173
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
G+ A+ Y +M + G D ++++C+ L D + +H + ++ D
Sbjct: 174 YSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGAD 233
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ Q +L+ MY K + A +VF + ++++WG++I+GF+Q G L EM S
Sbjct: 234 LIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLS 293
Query: 272 CG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPS 329
++P+ SA AC+++ G+ IHG ++ +L G S+ DMY+KCG
Sbjct: 294 QSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLE 353
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR +F ++ DL++WN IIA + + +E+ S F QM T + P+ T SLL A S
Sbjct: 354 SARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACS 413
Query: 390 HSGLVEEGRYWFDLMVSKYKIQ-------PTEKHYACMVDLLARAGEVEEALKIVDSMST 442
++ G + V Y ++ P ++ + ++ + +AL++ + +
Sbjct: 414 EPVMLNHG-----IQVHSYIVKMGFNLDIPVCNS---LLSMYSKCSNLNDALQVFEDIGN 465
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
+ + W LL+ C + + A +VL+ L FA K + V +
Sbjct: 466 KADIVSWNTLLTAC-------LQQNQAGEVLR----------LTKLMFASRIKPDHVT-L 507
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+ SG ++ Y EV ++H FIM+
Sbjct: 508 TNVLVSSG--QIASY---EVGSQIHCFIMK 532
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 299/528 (56%), Gaps = 1/528 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y +++ ARKLF +P T+N +I Y + E L+N MI V+PD
Sbjct: 254 LVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L + + L+ +E+ V DV++ S+++++Y K G + A F+
Sbjct: 314 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ 373
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+ ++MI+G V +G +A++ ++ + +EG+ + + M ++ ACA + +
Sbjct: 374 QNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKP 433
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + +++ L V V +++ DMYAK G LDLA F+ MS + V W ++IS F+Q
Sbjct: 434 GKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQ 493
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG ++L +M G + DSVSL SAL A A + L GK +HGY +R F + +
Sbjct: 494 NGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFV 553
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMYSKCG + A +F+ M ++ +SWN IIA+YG HG E L L+ +M+ +
Sbjct: 554 ASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGI 613
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH TF ++SA H+GLV+EG ++F M +Y I +HYACMVDL RAG V EA
Sbjct: 614 HPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAF 673
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ SM P VW LL C H + + ++ +L+L+P + G + L+SN A
Sbjct: 674 DTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAG 733
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+W V VR M++ G++K+PGYS ++VNG H F D +H + +I
Sbjct: 734 EWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEI 781
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 219/452 (48%), Gaps = 5/452 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIA-YSRKESPFEVLGLYNQMIKEDVR 73
R++ LY A LF EL LR +N +I Y F +L Y +M+ +V
Sbjct: 51 RVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALL-FYFKMLGSNVS 109
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF +KAC L ++ + + A LG+ D+F GS+++ LY G + +A
Sbjct: 110 PDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRV 169
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ +D + W+ M+ G V +G A+ + M+ + V ++ CA G+
Sbjct: 170 FDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNF 229
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG I D +V +LV MY+K G+L A +F M + + VTW LI+G+
Sbjct: 230 CAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGY 289
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG L M S G +PDSV+ S L + + G L+ K +H Y VR R F++
Sbjct: 290 VQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 349
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L +++ID+Y K G AR +F Q D+ +I+ Y +HG +A++ F +I+
Sbjct: 350 YLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 409
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ + T AS+L A + ++ G+ + K +++ + + D+ A+ G ++
Sbjct: 410 GMVTNSLTMASVLPACAAVAALKPGKE-LHCHILKKRLENIVNVGSAITDMYAKCGRLDL 468
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
A + MS + W +++S + K I
Sbjct: 469 AYEFFRRMSDRDSVC-WNSMISSFSQNGKPEI 499
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 184/363 (50%), Gaps = 1/363 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I AR++F+ELPLR +N ++ Y + +G + +M +
Sbjct: 153 LIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVN 212
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T+T L C + + G ++ + G+ D V ++++ +Y KCG + A F
Sbjct: 213 SVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFN 272
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + D V W+ +I G V NG EA + M G+ D V + + + G R
Sbjct: 273 TMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRH 332
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH Y +R + DV ++++L+D+Y K G +++A +F+ +++ A+ISG+
Sbjct: 333 CKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVL 392
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-L 314
+GL + + G +S+++ S L ACA + LK GK +H + +++ N+V +
Sbjct: 393 HGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNV 452
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+++ DMY+KCG A F +M RD + WN +I+S+ +G E A+ LF QM +
Sbjct: 453 GSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGA 512
Query: 375 KPD 377
K D
Sbjct: 513 KFD 515
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 183/374 (48%), Gaps = 3/374 (0%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+AC ++ ++ + + G G+ S +L LYV CG+ +A F +++ +
Sbjct: 18 FRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYA 77
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+ MI GL G A+ Y +M + D+ +I+AC L + + VH
Sbjct: 78 LPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDT 137
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ ++D+ ++L+ +YA G++ A VF + + + W ++ G+ ++G +
Sbjct: 138 ARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNA 197
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDM 321
+ EM++ +SV+ L CA G G +HG + F+F+ + +++ M
Sbjct: 198 IGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAM 257
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSKCG AR LF+ M D ++WN +IA Y +G +EA LF MI VKPD TF
Sbjct: 258 YSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 317
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
AS L ++ SG + + +V ++++ + ++D+ + G+VE A KI +
Sbjct: 318 ASFLPSILESGSLRHCKEVHSYIV-RHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ-N 375
Query: 442 TEPGLAVWVALLSG 455
+AV A++SG
Sbjct: 376 ILVDVAVCTAMISG 389
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 4/260 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L N I +Y + A + F + R +NS+I ++S+ P
Sbjct: 441 ILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIA 500
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ QM + DS + + AL A +L L G+E+ + + +D FV S+++++
Sbjct: 501 IDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDM 560
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F M K+ V W+S+I +G PRE +D Y M + GI D V
Sbjct: 561 YSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTF 620
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ +I AC G G+ + + + R + +++ +VD+Y + G + A K+M
Sbjct: 621 LVIISACGHAGLVDEGIH-YFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSM 679
Query: 239 SRI-NIVTWGALISGFAQNG 257
+ WG L+ +G
Sbjct: 680 PFTPDAGVWGTLLGACRLHG 699
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 306/567 (53%), Gaps = 22/567 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLF-EELPLRGVDTYNSIIIAYSRKESPFE 59
MI S S+ +I +Y + A +F + R V YN+II + +
Sbjct: 37 MITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASK 96
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
Y +M E V PD TF ++ C +M++K +I +++G DVFVGS+++N
Sbjct: 97 GFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVFVGSALVN 153
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y+K G M +A F ++ +D+V W++MING G EA++ ++RM +G+
Sbjct: 154 TYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFT 213
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ G++ A GD G +VHG ++ + V V +L+DMY K H+ A +F+ ++
Sbjct: 214 ITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMIN 273
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+I +W ++IS Q G TL L +M G PD V++ + L AC+ + L G+
Sbjct: 274 EKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGRE 333
Query: 300 IHGYTVRR----------FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
IHGY + D NL++ +V+DMY+KCG + A +FD M +D+ SWN++
Sbjct: 334 IHGYMIINGLGKDDENGAVD-NLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIM 392
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I YG+HG+ EAL +F QM E KP+ T +LSA +H+G V GR + M S +
Sbjct: 393 IMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFG 452
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ PT +HY C++D+L RAG +E+A +IV M + VW ALL C H + E A
Sbjct: 453 VIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAA 512
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
++VL+L P+ G + L+SN + + ++EEV VRKTM++ +KK PG S +E+ +H F
Sbjct: 513 RQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVF 572
Query: 530 IMEDKSH-------NQYEDIVYVLKKL 549
D++H NQ DI ++L ++
Sbjct: 573 RTGDRTHSELNALTNQLCDIGFILDEV 599
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 197/382 (51%), Gaps = 13/382 (3%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF-EKMQRKD 141
L++C +L G+++ + G+ +S++N+Y KCG+M EA++ F + ++
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+ ++++I+G V NG + YK+M+ EG+ D+ +++ C ++ + + +HG
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHG 134
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
++ L LDV V ++LV+ Y K G ++ A VF +S ++V W A+I+G+A+ G
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
LE+ M G P ++ L A G L GK++HG ++ +D + + ++ID
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY KC A +F+ + +D+ SWN II+ + G + L LF +M+ + + PD T
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-------CMVDLLARAGEVEEA 433
++L A SH + GR M+ + E ++D+ A+ G + A
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
LKI DSMS + +A W ++ G
Sbjct: 375 LKIFDSMSKKD-VASWNIMIMG 395
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 7/276 (2%)
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN-MS 239
+ +Q+CAD + G +H I + TSL++MY+K G + A VF +
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+ + A+ISGF NGLA + +M+ G PD + + C ++ + K
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KK 131
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHG ++ + ++ +G+++++ Y K G A+ +F ++ RD++ WN +I Y G
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+EAL +F +M V P T +LS + G ++ G+ + V K
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGI-VMKMGYDSGVSVSN 250
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++D+ + + +AL I+ M E + W +++S
Sbjct: 251 ALIDMYGKCKHIGDAL-IIFEMINEKDIFSWNSIIS 285
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 301/521 (57%), Gaps = 4/521 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF-EVLGLYNQMIKEDVRP 74
+++ YG + A ++F+E+P + + ++N++I +S + + L ++ MI E ++P
Sbjct: 82 LLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKP 141
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+S T + L V L K G E+ ++ +G +D+F+ +S++++Y K G EA F
Sbjct: 142 NSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVF 201
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
K+ K++V W++MI N AV ++M+ G + V ++ ACA +G R
Sbjct: 202 YKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVR 261
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H SI D+ V +L DMYAK+GHL LA +VF R + V++ LI G +
Sbjct: 262 PGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLR-DEVSYNILIVGHS 320
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
Q +L L EMQ G + D+VS + AL ACA + +K GK IHG+ +R+ F +L
Sbjct: 321 QTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLF 380
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++D Y+KCG AR +FD+M ++D+ SWN +I YG+ G + A+ LF M +
Sbjct: 381 VANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDD 440
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+ D +F ++LSA SH GL+E+GR +FD + ++ I+PT+ HYACMVDLL RAG +EEA
Sbjct: 441 VEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEA 499
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+++ + P +W ALL C + + A+ + +L P+ G + L+SN +A
Sbjct: 500 AELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAET 559
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+W+E +R+ M+ G+KK PG S V++ + HAF++ +K
Sbjct: 560 GRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEK 600
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 222/398 (55%), Gaps = 7/398 (1%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L +YNQM++ VRPD TF LKAC +++ G E+ V+LG+ +DVFVG+++L+
Sbjct: 26 LEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSF 85
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG-QPREAVDAYKRMKKEGIDADEVV 179
Y CG + +A F++M KDLV W++MI NG R+A+D ++ M EG+ + +
Sbjct: 86 YGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSIT 145
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ + +L + G VHG SIR L D+ + SL+DMYAK+GH AS+VF +
Sbjct: 146 ISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLD 205
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+V+W A+I+ FAQN + L+ +MQ G P+SV+ + L ACA++G ++ GK
Sbjct: 206 AKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKE 265
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH ++ F+L + ++ DMY+K G AR +FD RD +S+N++I +
Sbjct: 266 IHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSD 324
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHY 417
E+LSLF +M +K D+ +F LSA ++ +++G+ ++ K + I +
Sbjct: 325 CSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVAN- 383
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D + G + A I D M T +A W ++ G
Sbjct: 384 -SLLDFYTKCGRIGLARNIFDRM-TNKDVASWNTMILG 419
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
R W LI G++ G+ G LE+ +M G PD + L ACA ++ G+
Sbjct: 4 RTTAFLWNTLIRGYSIAGVGGG-LEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGRE 62
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG- 357
+HG V+ F+ ++ +G +++ Y CG A +FD+M +DL+SWN +I + ++G
Sbjct: 63 VHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGW 122
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
H +AL +F MI+ +KP+ T +S L L + GR ++ S ++ +
Sbjct: 123 HYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGR---EVHGSSIRMGLESDIF 179
Query: 418 AC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++D+ A++G EA + + + + W A+++
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDAK-NVVSWNAMIA 217
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 325/577 (56%), Gaps = 23/577 (3%)
Query: 1 MIKTNLSAYG------NS--VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS 52
M+ + AYG NS + ++A+YG + S++ L R + T+N+++ +
Sbjct: 132 MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 191
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDV 111
+ E E L +M+ E V PD T + L AC L L+ G+E+ A++ G +
Sbjct: 192 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 251
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
FVGS+++++Y C ++ F+ M + + W++MI G N +EA+ + M++
Sbjct: 252 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 311
Query: 172 -GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
G+ A+ M G++ AC G ++HG+ ++R L+ D VQ +L+DMY++ G +D+
Sbjct: 312 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 371
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-----------CGFEPDSV 279
A +F M ++VTW +I+G+ + L LL +MQ+ +P+S+
Sbjct: 372 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 431
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L++ L +CA + L GK IH Y ++ ++ +G++++DMY+KCG +R +FDQ+
Sbjct: 432 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 491
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+++I+WNVII +YG+HG+G+EA+ L M+ VKP+ TF S+ +A SHSG+V+EG
Sbjct: 492 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 551
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCH 457
F +M Y ++P+ HYAC+VDLL RAG ++EA ++++ M + A W +LL
Sbjct: 552 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 611
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
H IGE A+ +++L P+ + L++N ++ W++ VR+ M++ G++K PG
Sbjct: 612 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 671
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S +E E+H F+ D SH Q E + L+ L+ MR
Sbjct: 672 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 708
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 204/398 (51%), Gaps = 14/398 (3%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND-VFVGSSMLNLYVKCG 125
MI ++PD+ F LKA L D+++G++I + GYG D V V ++++NLY KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
F+++ ++ V W+S+I+ L + A++A++ M E ++ ++ ++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 186 ACADLGDSR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
AC++L G VH Y +R+ L+ + +LV MY K G L + + + +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+VTW ++S QN LE L EM G EPD ++ S L AC+ + L+ GK +H
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239
Query: 303 YTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
Y ++ D N +G++++DMY C R +FD M R + WN +IA Y + H +
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299
Query: 361 EALSLFLQMIETM-VKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYKIQPTEKHY 417
EAL LF+ M E+ + + +T A ++ A SG +E + F V K +
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF---VVKRGLDRDRFVQ 356
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ +R G+++ A++I M + L W +++G
Sbjct: 357 NTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 393
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 219/442 (49%), Gaps = 19/442 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY D + K+F+ + R ++NS+I + E L + M+ E+V P
Sbjct: 52 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 111
Query: 76 SSTFTVALKACVSLM---DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
S T + AC +L L MG+++ + G N F+ ++++ +Y K GK+ + V
Sbjct: 112 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKV 170
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+DLV W+++++ L N Q EA++ + M EG++ DE + ++ AC+ L
Sbjct: 171 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 230
Query: 193 SRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H Y+++ L+ + V ++LVDMY + VF M I W A+I+
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G++QN L L + M +S G +S ++ + AC + G ++IHG+ V+R D
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--L 367
+ + +++DMYS+ G A +F +M+ RDL++WN +I Y H E+AL L +
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 410
Query: 368 QMIETMV---------KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
Q +E V KP+ T ++L + + + +G+ + K + +
Sbjct: 411 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGS 469
Query: 419 CMVDLLARAGEVEEALKIVDSM 440
+VD+ A+ G ++ + K+ D +
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQI 491
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/577 (33%), Positives = 312/577 (54%), Gaps = 8/577 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I AR +F+ + R V ++N+++ ++ E ++ QM +E + PD
Sbjct: 464 LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPD 523
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T+ L S L+ E+ + AVE G +D VGS+ +++Y++CG +++A + F+
Sbjct: 524 STTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFD 583
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ + + W++MI G REA+ + +M++EG D + ++ A D +
Sbjct: 584 KLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEW 643
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH ++ L +D++V +LV Y+K G++ A VF +M N+ TW +I G AQ
Sbjct: 644 VKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQ 702
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G ++M G PD+ + VS L ACA G L+ K +H + V +L +
Sbjct: 703 HGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRV 762
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++ MY+KCG AR++FD M RD+ SW V+I HG G EAL F++M
Sbjct: 763 GNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGF 822
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ ++ ++L+A SH+GLV+EGR F M Y I+PT +HY CMVDLL RAG +EEA
Sbjct: 823 KPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAE 882
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ +M EP A W ALL C + + E AK+ LKL P + L+SN +A
Sbjct: 883 LFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATG 942
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KWE+ VR M++ G++K PG S +EV+ +H+F++ D SH + ++I L L ++
Sbjct: 943 KWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLK 1002
Query: 555 A------ISSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
A L+ +EH+E S + + A Y L
Sbjct: 1003 AKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGL 1039
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 248/469 (52%), Gaps = 27/469 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ + +++ +Y + AR++F++L + + + ++I Y+ +
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDA 203
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +Y++M +E +P+ T+ LKAC ++LK G++I ++ G+ +DV V ++++N+
Sbjct: 204 MRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNM 263
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVKCG + +A + F+KM ++++ W+ MI GL G+ +EA + +M++EG +
Sbjct: 264 YVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTY 323
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ A A G + VH +++ L LD++V +LV MYAK+G +D A VF M+
Sbjct: 324 VSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE 383
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL--LACAQIGFLKLGK 298
+I +W +I G AQ+G L ++MQ G P+ + +S L A A L+ K
Sbjct: 384 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVK 443
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + F +L +G ++I MY+KCG AR +FD M RD+ISWN ++ +G
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVS 406
G EA ++FLQM + + PD +T+ SLL+ H VE G ++S
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG------LIS 557
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+++ + + + R G +++A + D +S + W A++ G
Sbjct: 558 DFRVG------SAFIHMYIRCGSIDDARLLFDKLSVRH-VTTWNAMIGG 599
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 228/448 (50%), Gaps = 4/448 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I AR +F+ + R + ++ +I ++ E L+ QM + P+
Sbjct: 361 LVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPN 420
Query: 76 SSTFTVALKACV--SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+T+ L A S L+ + + + A E G+ +D+ +G++++++Y KCG +++A +
Sbjct: 421 LTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLV 480
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D++ W++M+ GL NG EA + +M++EG+ D + L+
Sbjct: 481 FDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDAL 540
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ VH +++ L D +V ++ + MY + G +D A +F +S ++ TW A+I G
Sbjct: 541 EWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGA 600
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQ L L ++MQ GF PD+ + ++ L A L+ K +H + +L
Sbjct: 601 AQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLR 660
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G +++ YSKCG A+ +FD M R++ +W ++I HG G +A S FLQM+
Sbjct: 661 VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG 720
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ PD +T+ S+LSA + +G +E + + VS + A +V + A+ G +++A
Sbjct: 721 IVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNA-LVHMYAKCGSIDDA 779
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ D M E + W ++ G H +
Sbjct: 780 RSVFDDM-VERDVFSWTVMIGGLAQHGR 806
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 217/415 (52%), Gaps = 31/415 (7%)
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+++ + DS ++ L+ C+ D+ + +++ ++ G +++V + +L +Y++CG++
Sbjct: 110 VQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRL 169
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A F+K+ +K++ W++MI G G +A+ Y +M++E +E+ + +++AC
Sbjct: 170 QCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC 229
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ ++G +H + I+ DV+V+T+LV+MY K G ++ A +F M N+++W
Sbjct: 230 CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWT 289
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+I G A G L ++MQ GF P+S + VS L A A G L+ K +H + V
Sbjct: 290 VMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA 349
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+L +G +++ MY+K G AR +FD M RD+ SW V+I HG G+EA SLF
Sbjct: 350 GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLF 409
Query: 367 LQMIETMVKPDHSTFASLLSA---LSHSGL---------VEEGRYWFDLMVSKYKIQPTE 414
LQM P+ +T+ S+L+A S S L EE + DL +
Sbjct: 410 LQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGN------- 462
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL-----SGCHNHKKFSI 464
++ + A+ G +++A + D M ++ W A++ +GC H+ F++
Sbjct: 463 ----ALIHMYAKCGSIDDARLVFDGMCDRDVIS-WNAMMGGLAQNGC-GHEAFTV 511
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 29/336 (8%)
Query: 142 LVCWSSMINGLVFNGQ----PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
LVC ++ ++G ++AV K ++GI D + ++Q C D
Sbjct: 79 LVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAK 138
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
VH I+ + ++ V L+ +Y + G L A VF + + NI W +I G+A+ G
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198
Query: 258 LAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
A + + +M Q CG +P+ ++ +S L AC LK GK IH + ++ F ++ +
Sbjct: 199 HAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
T++++MY KCG A+ +FD+M R++ISW V+I +G G+EA LFLQM
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317
Query: 376 PDHSTFASLLSALSHSGLVE----------EGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
P+ T+ S+L+A + +G +E DL V +V + A
Sbjct: 318 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGN-----------ALVHMYA 366
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++G +++A + D M TE + W ++ G H +
Sbjct: 367 KSGSIDDARVVFDGM-TERDIFSWTVMIGGLAQHGR 401
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 309/579 (53%), Gaps = 37/579 (6%)
Query: 1 MIKTNLSAYGNSVGRII---ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ +++ L + + A +F+ + + +N++ ++ P
Sbjct: 25 MIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDP 84
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY M+ + P+S TF LK+C K G+++ + ++ G+ D+++ +S+
Sbjct: 85 VSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSL 144
Query: 118 LNLYVKCGKMNEAMVA-------------------------------FEKMQRKDLVCWS 146
+++YV+ G++ +A F+++ KD+V W+
Sbjct: 145 ISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWN 204
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+ I+G G +EA++ +K+M K + DE M+ ++ ACA G G VH +
Sbjct: 205 AXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDH 264
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++K+ +L+D+Y+K G L+ A +F+ +S ++++W LI G+ L L L
Sbjct: 265 GFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD---FNLVLGTSVIDMYS 323
+M G +P+ V+++S L ACA +G + +G+ IH Y +R L TS+IDMY+
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A+ +FD M +R L SWN +I + +HG A +F +M + ++PD TF
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHSG+++ GR+ F M YK+ P +HY CM+DL +G +EA K++++M E
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME 504
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C H +GE A+ ++K+ P++ G + L+SN +A ++W EVA R
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTR 564
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ GMKKVPG S +E++ +H FI+ DK H + +I
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 210/444 (47%), Gaps = 44/444 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE---AMVAFEKMQR 139
L C +L L++ I + ++ G N + S +L V + A+ F+ +Q
Sbjct: 9 LHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
L+ W++M G + P A+ Y M G+ + L+++CA + G +
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHL-------DLASH------------------- 233
HG ++ +LD+ + TSL+ MY + G L D +SH
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185
Query: 234 -----VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+F + ++V+W A ISG+A+ G LEL +M PD ++V+ L AC
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
AQ G ++LG+ +H + F NL + ++ID+YSKCG A LF + ++D+ISWN
Sbjct: 246 AQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWN 305
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y +EAL LF M+ + KP+ T S+LSA +H G ++ GR W + + K
Sbjct: 306 TLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGR-WIHVYIDK 364
Query: 408 Y--KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ ++D+ A+ G++E A ++ DSM L+ W A++ G H + +
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNR-SLSSWNAMIFGFAMHGRANAA 423
Query: 466 EKVAKKVLK--LNPDDLGIHALVS 487
+ ++ K + PDD+ L+S
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLS 447
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 306/539 (56%), Gaps = 1/539 (0%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S ++ +Y D+ A +FE++ + ++N++I E + L L QM +
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG 354
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ P+ T + ALKAC + ++G ++ +++ +D+FV ++++Y KC + +A
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+AF + KDL+ W+++I+G + EA+ + M KEGI ++ + ++++ A L
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
VHG S++ + D+ V SL+D Y K H++ A +F+ + ++V++ ++I+
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 534
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+AQ G L+L +EMQ +PD S L ACA + + GK +H + ++ F
Sbjct: 535 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 594
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ G S+++MY+KCG A F ++ R ++SW+ +I HGHG +AL LF QM+
Sbjct: 595 DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 654
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V P+H T S+L A +H+GLV E + +F+ M + +P ++HYACM+DLL RAG++
Sbjct: 655 KEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 714
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA+++V+ M E +VW ALL HK +G + A+ + L P+ G H L++N +
Sbjct: 715 NEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIY 774
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A KWE VA VR+ MR S +KK PG S +EV +++ F++ D+SH + ++I L +L
Sbjct: 775 ASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDEL 833
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 241/445 (54%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ + +++LF+E+P R V ++N++ Y + + E +GL+ +M+ ++P+
Sbjct: 198 LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPN 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + + AC L D G+ I ++LGY D F ++++++Y K G + +A+ FE
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFE 317
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+++ D+V W+++I G V + +A++ +MK+ GI + + ++ACA +G
Sbjct: 318 KIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKEL 377
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ + D+ V LVDMY+K L+ A F + +++ W A+ISG++Q
Sbjct: 378 GRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 437
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
L L +EM G + +L + L + A + + + + +HG +V+ F ++ +
Sbjct: 438 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYV 497
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+ID Y KC A +F++ DL+S+ +I +Y +G GEEAL LFL+M + +
Sbjct: 498 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 557
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD +SLL+A ++ E+G+ + + KY +V++ A+ G +++A
Sbjct: 558 KPDRFVCSSLLNACANLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 616
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
+ + TE G+ W A++ G H
Sbjct: 617 RAFSEL-TERGIVSWSAMIGGLAQH 640
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 258/508 (50%), Gaps = 34/508 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+ K+ LS + +I LY + ARKL +E + +++++I Y++
Sbjct: 82 ITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L +++M V+ + TF+ LKAC + DL++G+++ V G+ DVFV ++++ +
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVM 201
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + ++ F+++ +++V W+++ + V EAV + M GI +E +
Sbjct: 202 YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSL 261
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ AC L DS G +HGY I+ + D +LVDMYAK G L A VF+ + +
Sbjct: 262 SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ 321
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV+W A+I+G + LELL +M+ G P+ +L SAL ACA +G +LG+ +
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQL 381
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ + +L + ++DMYSKC + AR F+ + +DLI+WN II+ Y +
Sbjct: 382 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 441
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR---------------YWFDLM 404
EALSLF++M + + + +T +++L + + +V R Y + +
Sbjct: 442 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 501
Query: 405 VSKY----KIQPTEK-----------HYACMVDLLARAGEVEEALKI---VDSMSTEPGL 446
+ Y ++ E+ + M+ A+ G+ EEALK+ + M +P
Sbjct: 502 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 561
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLK 474
V +LL+ C N F G+++ +LK
Sbjct: 562 FVCSSLLNACANLSAFEQGKQLHVHILK 589
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 208/423 (49%), Gaps = 10/423 (2%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
LP + + +S+ +L L + K + P S +++ L C + L+ G
Sbjct: 19 LPFKPAPKLIQTVPQFSQDPQTTAILNLID---KGNFTPTSVSYSKLLSQCCTTKSLRPG 75
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+I + G +D + + ++NLY KC A ++ DLV WS++I+G N
Sbjct: 76 LQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQN 135
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G A+ A+ M G+ +E +++AC+ + D R G VHG + DV V
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+LV MYAK + +F + N+V+W AL S + Q G + L EM G +
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ SL S + AC + GK IHGY ++ +D++ +++DMY+K G + A ++
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F++++ D++SWN +IA +H H E+AL L QM + + P+ T +S L A + GL
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK 375
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
E GR L S K+ + +VD+ ++ +E+A ++ ++ E L W A+
Sbjct: 376 ELGR---QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA-RMAFNLLPEKDLIAWNAI 431
Query: 453 LSG 455
+SG
Sbjct: 432 ISG 434
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 289/499 (57%), Gaps = 4/499 (0%)
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L LY+QM ++ P++ TF AC +L +++M + +LG ND +SM+
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEV 178
+Y +CG+ A F+++ KDLV W+S+++G G REAV+ + R+++E G + DE+
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ ++ AC +LGD G V G+ + R + ++ + ++L+ MY+K G L + +F M
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ +TW A IS +AQNG+A + L M+ G +P+ V+L + L ACA IG L LGK
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+ Y R ++ + T++IDMY+KCG A+ +F+ M ++ SWN +I++ HG
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 358 HGEEALSLFLQMIET--MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+EALSLF +M + +P+ TF SLLSA H+GLV+EG FD+M + + + P +
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 460
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY+CMVDLL+RAG + EA +++ M +P AL S C K IGE+V + +L+L
Sbjct: 461 HYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLEL 520
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
+P + G + + S + W++ A +R MR++G+ K PG S +EV +L F+ D
Sbjct: 521 DPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGL 580
Query: 536 HNQYEDIVYVLKKLYLEMR 554
D+ ++ LY E++
Sbjct: 581 TLDSIDVRNIIDLLYEELK 599
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 43/404 (10%)
Query: 1 MIKTNLSAYGNSVGRIIALY--GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+ K L ++V ++ +Y G+N + ARK+F+E+ + + ++NS++ Y++
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGV--ARKVFDEITEKDLVSWNSLLSGYAKLGFAR 200
Query: 59 EVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E + ++ ++ +E PD + L AC L DL++G + VE G + ++GS++
Sbjct: 201 EAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSAL 260
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++Y KCG++ + F+ M +D + W++ I+ NG EA+ + MK+ G+D ++
Sbjct: 261 ISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNK 320
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V + ++ ACA +G G + Y+ R L D+ V T+L+DMYAK G L+ A VF +
Sbjct: 321 VTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFND 380
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVSLVSALLACAQIGFLK 295
M R N +W A+IS A +G A L L M G P+ ++ VS L AC G +
Sbjct: 381 MPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVD 440
Query: 296 LGKSIHGYTVRRFDFNLVLGTSV--IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
G R FD L V I+ YS C V +RA
Sbjct: 441 EG-------YRLFDMMSTLFGLVPKIEHYS-CMVDLLSRA-------------------- 472
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
GH EA + +M E KPD+ T +L SA V+ G
Sbjct: 473 ---GHLYEAWDVIEKMPE---KPDNVTLGALHSACQRKKNVDIG 510
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 293/535 (54%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + AR++F+ L +R V T+N ++ Y++ + L+ +M + ++P+
Sbjct: 199 LVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPN 258
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+F L C + L G+ + + + G +D+ V +S++ +Y CG + A F+
Sbjct: 259 KISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFD 318
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ +D+V W+ MI G NG +A + M++EGI D + M ++ ACA +
Sbjct: 319 NMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNH 378
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H D+ V T+LV MYAK G + A VF M R ++V+W A+I + +
Sbjct: 379 AREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVE 438
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG E M+ EPD V+ ++ L AC +G L +G I+ ++ ++ L
Sbjct: 439 NGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPL 498
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I M +K G AR +FD M RD+I+WN +I Y +HG+ EAL LF +M++
Sbjct: 499 GNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERF 558
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF +LSA S +G V+EGR +F ++ I PT K Y CMVDLL RAGE++EA
Sbjct: 559 RPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAE 618
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ SM +P ++W +LL C H + E+ A++ L ++P D ++ +S+ +A
Sbjct: 619 LLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAG 678
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
WE VA VRK M G++K G + +EV G++H F++ED+SH +I L +L
Sbjct: 679 MWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARL 733
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 196/390 (50%), Gaps = 23/390 (5%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS T+ + C L D +G+++ ++ G +++ ++++ LY CG + EA F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ ++ K +V W+++I G G +EA +++M EG++ + + ++ AC+
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G VH + D ++ T+LV MY K G +D A VF + ++ T+ ++ G+A
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++G EL MQ G +P+ +S +S L C L GK++H + ++
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ TS+I MY+ CG AR +FD M+ RD++SW V+I Y +G+ E+A LF M E
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG 355
Query: 374 VKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYACMVDL 423
++PD T+ +++A + S + R + DL+VS +V +
Sbjct: 356 IQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS-----------TALVHM 404
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALL 453
A+ G +++A ++ D+M + W A++
Sbjct: 405 YAKCGAIKDARQVFDAMPRRD-VVSWSAMI 433
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 3/296 (1%)
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A D +R+ + G D + L Q C +L D+ G V + I+ L++ +L+
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+Y+ G++ A +F ++ +VTW ALI+G+AQ G L +M G EP ++
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
+S L AC+ L GK +H V F + +GT+++ MY K G AR +FD +
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
RD+ ++NV++ Y G E+A LF +M + +KP+ +F S+L + G+
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + + ++ + G +E A ++ D+M + W ++ G
Sbjct: 281 VHAQCMNAGLVDDI-RVATSLIRMYTTCGSIEGARRVFDNMKVRD-VVSWTVMIEG 334
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK +L ++ +I + + AR +F+ + R V T+N++I YS + E L
Sbjct: 488 IKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREAL 547
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNL 120
L+++M+KE RP+S TF L AC + G + +E G V + M++L
Sbjct: 548 YLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDL 607
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVC-WSSMINGLVFNGQPREAVDAYKR 167
+ G+++EA + + M K WSS++ +G A A +R
Sbjct: 608 LGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAER 655
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 292/528 (55%), Gaps = 34/528 (6%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S R +F+E+P + V +N +I +Y + L ++ M + PD T+ LKA
Sbjct: 1078 STRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASS 1137
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
DL +G +I V +G +VFVG+ ++++Y KCG + EA ++M +D+V W+S
Sbjct: 1138 GSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNS 1197
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
++ G NGQ +A++ K M+ G+ D M L+ A
Sbjct: 1198 LVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA--------------------- 1236
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
V + +D ++ +F ++ ++V+W +I+ + N + +++ +
Sbjct: 1237 ------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFL 1284
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
+M+ +PD++S+ S L AC + L LG+ IH Y VR R NL+L ++IDMY+KCG
Sbjct: 1285 QMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCG 1344
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR +FDQM+ RD++SW +I++YG++G G +A+SLF +M + + PD F S+LS
Sbjct: 1345 CLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLS 1404
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SH+GL++EGRY+F LM + KI P +H+ CMVDLL RAG+V+EA + M EP
Sbjct: 1405 ACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNE 1464
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VW ALLS C + IG A ++ +L P+ G + L+SN +A +WE+V VR M
Sbjct: 1465 RVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIM 1524
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ G+KK+PG S E++ +H F+ D+SH Q + I L L +M+
Sbjct: 1525 KTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMK 1572
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 180/377 (47%), Gaps = 36/377 (9%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G ++ Y CG+ F+++ +K++V ++ MI V N +A+ +K M G
Sbjct: 1062 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 1121
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
ID D +++A + D G+ +H +R L+L+V V L+ MY K G L A
Sbjct: 1122 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 1181
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
V M ++V+W +L++G A+NG LE+ EM+ G +PD+ ++ S L A
Sbjct: 1182 RVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA----- 1236
Query: 293 FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
V T + ++ S + +F ++ ++ L+SWNV+IA
Sbjct: 1237 --------------------VTNTCLDNV-------SFVKEMFMKLANKSLVSWNVMIAV 1269
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y + EA+ +FLQM + V PD + AS+L A + GR + +V K ++QP
Sbjct: 1270 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK-RLQP 1328
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAK 470
++D+ A+ G +E A ++ D M + W +++S G + + ++
Sbjct: 1329 NLLLENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMISAYGMNGKGRDAVSLFSRM 1387
Query: 471 KVLKLNPDDLGIHALVS 487
+ L LNPD + +++S
Sbjct: 1388 QDLGLNPDSIAFVSVLS 1404
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 10/235 (4%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
+++ +++F +L + + ++N +I Y P E + ++ QM V PD+ + L
Sbjct: 1243 DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 1302
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
AC L L +G I V ++ + ++++++Y KCG + A F++M+ +D+V
Sbjct: 1303 PACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV 1362
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DLGDSRFGLS 198
W+SMI+ NG+ R+AV + RM+ G++ D + + ++ AC+ D G F L
Sbjct: 1363 SWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLM 1422
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
I + V +VD+ + G +D A K M N WGAL+S
Sbjct: 1423 TEECKIVPRIEHFV----CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
I L+ + + L+ YA G H+F + + N+V + +I + N L L
Sbjct: 1052 IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDAL 1111
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
+ M G +PD + L A + L +G IH VR D N+ +G +I MY
Sbjct: 1112 LVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMY 1171
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
KCG A + DZM RD++SWN ++A +G ++AL + +M +KPD T A
Sbjct: 1172 GKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMA 1231
Query: 383 SLLSALSHSGL 393
SLL A++++ L
Sbjct: 1232 SLLPAVTNTCL 1242
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQI----GFLKLGKSIHGYTVRRFDF--NLVLGTSV 318
L++ +Q F V L L C QI +K K +H D N LG +
Sbjct: 1009 LVLSIQKPKFTQQXVVLTENL--CGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKL 1066
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+ Y+ CG P R +FD++ ++++ +NV+I SY + +AL +F M + PDH
Sbjct: 1067 MRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDH 1126
Query: 379 STFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
T+ +L A S H+ +V G DL V ++ + +
Sbjct: 1127 YTYPCVLKASSGSEDLWVGMQIHAAVVRVG---LDLNVFVGN---------GLISMYGKC 1174
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK--KVLKLNPD 478
G + EA +++D M + W +L++GC + +F +V K ++L L PD
Sbjct: 1175 GCLVEACRVLDZMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPD 1226
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 293/508 (57%), Gaps = 7/508 (1%)
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L LY+QM ++ P++ TF AC +L +++M + +LG ND +SM+
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEV 178
+Y +CG+ A F+++ KDLV W+S+++G G REAV+ + R+++E G + DE+
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ ++ AC +LGD G V G+ + R + ++ + ++L+ MY+K G L + +F M
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ +TW A IS +AQNG+A + L M+ G +P+ V+L + L ACA IG L LGK
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+ Y R ++ + T++IDMY+KCG A+ +F+ M ++ SWN +I++ HG
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 358 HGEEALSLFLQMIET--MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+EALSLF +M + +P+ TF SLLSA H+GLV+EG FD+M + + + P +
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 460
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY+CMVDLL+RAG + EA +++ M +P AL S C K IGE+V + +L+L
Sbjct: 461 HYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLEL 520
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
+P + G + + S + W++ A +R MR++G+ K PG S +EV +L F+ D
Sbjct: 521 DPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGL 580
Query: 536 HNQYEDIVYVLKKLYLEMRA---ISSWL 560
D+ ++ LY E++ +S W+
Sbjct: 581 TLDSIDVRNIIDLLYEELKKEGYLSYWI 608
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 43/404 (10%)
Query: 1 MIKTNLSAYGNSVGRIIALY--GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+ K L ++V ++ +Y G+N + ARK+F+E+ + + ++NS++ Y++
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGV--ARKVFDEITEKDLVSWNSLLSGYAKLGFAR 200
Query: 59 EVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E + ++ ++ +E PD + L AC L DL++G + VE G + ++GS++
Sbjct: 201 EAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSAL 260
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++Y KCG++ + F+ M +D + W++ I+ NG EA+ + MK+ G+D ++
Sbjct: 261 ISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNK 320
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V + ++ ACA +G G + Y+ R L D+ V T+L+DMYAK G L+ A VF +
Sbjct: 321 VTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFND 380
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVSLVSALLACAQIGFLK 295
M R N +W A+IS A +G A L L M G P+ ++ VS L AC G +
Sbjct: 381 MPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVD 440
Query: 296 LGKSIHGYTVRRFDFNLVLGTSV--IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
G R FD L V I+ YS C V +RA
Sbjct: 441 EG-------YRLFDMMSTLFGLVPKIEHYS-CMVDLLSRA-------------------- 472
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
GH EA + +M E KPD+ T +L SA V+ G
Sbjct: 473 ---GHLYEAWDVIEKMPE---KPDNVTLGALHSACQRKKNVDIG 510
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 294/542 (54%), Gaps = 14/542 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG--LYNQMIKEDVRPDSSTFTVALKAC 86
A +F +P R + +N+++ Y+ + L QM +RP++ST L
Sbjct: 64 AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123
Query: 87 VSLMDLKMGEEIWRKAVELGY----------GNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
L G + + + V +G+++L++Y KCG + A F+
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
M ++ V WS++I G V + +A +K M +G+ + ++ACA L R
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 243
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ D+ SL+ MYAK G +D A +F M+ + V++ AL+SG+ Q
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 303
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLVL 314
NG A + +MQ+C EPD+ ++VS + AC+ + L+ G+ HG +R +
Sbjct: 304 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 363
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY+KCG +R +F+ M SRD++SWN +IA YGIHG G+EA +LFL+M
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF LLSA SHSGLV EG++WF +M Y + P +HY CMVDLL+R G ++EA
Sbjct: 424 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 483
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM + VWVALL C +K +G+KV++ + +L P+ G L+SN ++
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 543
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++E A VR + G KK PG S +E+NG LHAF+ D+SH Q +I L + + ++
Sbjct: 544 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK 603
Query: 555 AI 556
+
Sbjct: 604 KL 605
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 221/442 (50%), Gaps = 28/442 (6%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ V P++ TF ALKAC +L D G I R A+ G D+FV +++L++YVKC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY--KRMKKEGIDADEVVMMGLI 184
+ +A F M +DLV W++M+ G +G AV +M+ + + ++ L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 185 QACADLGDSRFGLSVHGYSIRR--HLNLDVKVQ--------TSLVDMYAKTGHLDLASHV 234
A G G SVH Y IR H N + K + T+L+DMYAK G L A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS---CGFEPDSVSLVSALLACAQI 291
F M N VTW ALI GF L M + C P S++ SAL ACA +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
L++G+ +H + +L G S++ MY+K G+ A ALFD+M +D +S++ ++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ Y +G EEA +F +M V+PD +T SL+ A SH ++ GR ++ +
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
T A ++D+ A+ G ++ + ++ + M + + W +++G H +G++
Sbjct: 359 SETSICNA-LIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGKEATA 413
Query: 471 KVLKLN-----PDDLGIHALVS 487
L++N PD + L+S
Sbjct: 414 LFLEMNNLGFPPDGVTFICLLS 435
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 161/294 (54%), Gaps = 6/294 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ AR++F+ +P R T++++I + + L+ M+ + +
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 76 SST-FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S T AL+AC SL L+MGE++ + G D+ G+S+L++Y K G +++A+ F
Sbjct: 224 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD V +S++++G V NG+ EA +K+M+ ++ D M+ LI AC+ L +
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 343
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG I R L + + +L+DMYAK G +DL+ VF M +IV+W +I+G+
Sbjct: 344 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 403
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-----HGY 303
+GL L +EM + GF PD V+ + L AC+ G + GK HGY
Sbjct: 404 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGY 457
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ +L+A GNS ++++Y I A LF+E+ ++ +Y++++ Y + E
Sbjct: 256 VHADLTA-GNS---LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 311
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M +V PD++T + AC L L+ G + G ++ + ++++++Y
Sbjct: 312 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 371
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG+++ + F M +D+V W++MI G +G +EA + M G D V +
Sbjct: 372 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 431
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
L+ AC+ G F + HGY L ++ +VD+ ++ G LD A +
Sbjct: 432 CLLSACSHSGLVIEGKHWFHVMGHGYG----LTPRMEHYICMVDLLSRGGFLDEAYEFIQ 487
Query: 237 NMS-RINIVTWGALI 250
+M R ++ W AL+
Sbjct: 488 SMPLRADVRVWVALL 502
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 294/542 (54%), Gaps = 14/542 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG--LYNQMIKEDVRPDSSTFTVALKAC 86
A +F +P R + +N+++ Y+ + L QM +RP++ST L
Sbjct: 64 AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123
Query: 87 VSLMDLKMGEEIWRKAVELGY----------GNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
L G + + + V +G+++L++Y KCG + A F+
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
M ++ V WS++I G V + +A +K M +G+ + ++ACA L R
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 243
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ D+ SL+ MYAK G +D A +F M+ + V++ AL+SG+ Q
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 303
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVL 314
NG A + +MQ+C EPD+ ++VS + AC+ + L+ G+ HG + R +
Sbjct: 304 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 363
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY+KCG +R +F+ M SRD++SWN +IA YGIHG G+EA +LFL+M
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF LLSA SHSGLV EG++WF +M Y + P +HY CMVDLL+R G ++EA
Sbjct: 424 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 483
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM + VWVALL C +K +G+KV++ + +L P+ G L+SN ++
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 543
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++E A VR + G KK PG S +E+NG LHAF+ D+SH Q +I L + + ++
Sbjct: 544 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK 603
Query: 555 AI 556
+
Sbjct: 604 KL 605
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 221/442 (50%), Gaps = 28/442 (6%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ V P++ TF ALKAC +L D G I R A+ G D+FV +++L++YVKC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY--KRMKKEGIDADEVVMMGLI 184
+ +A F M +DLV W++M+ G +G AV +M+ + + ++ L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 185 QACADLGDSRFGLSVHGYSIRR--HLNLDVKVQ--------TSLVDMYAKTGHLDLASHV 234
A G G SVH Y IR H N + K + T+L+DMYAK G L A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS---CGFEPDSVSLVSALLACAQI 291
F M N VTW ALI GF L M + C P S++ SAL ACA +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
L++G+ +H + +L G S++ MY+K G+ A ALFD+M +D +S++ ++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ Y +G EEA +F +M V+PD +T SL+ A SH ++ GR ++ +
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
T A ++D+ A+ G ++ + ++ + M + + W +++G H +G++
Sbjct: 359 SETSICNA-LIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGKEATA 413
Query: 471 KVLKLN-----PDDLGIHALVS 487
L++N PD + L+S
Sbjct: 414 LFLEMNNLGFPPDGVTFICLLS 435
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 161/294 (54%), Gaps = 6/294 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ AR++F+ +P R T++++I + + L+ M+ + +
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 76 SST-FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S T AL+AC SL L+MGE++ + G D+ G+S+L++Y K G +++A+ F
Sbjct: 224 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD V +S++++G V NG+ EA +K+M+ ++ D M+ LI AC+ L +
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 343
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG I R L + + +L+DMYAK G +DL+ VF M +IV+W +I+G+
Sbjct: 344 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 403
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-----HGY 303
+GL L +EM + GF PD V+ + L AC+ G + GK HGY
Sbjct: 404 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGY 457
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ +L+A GNS ++++Y I A LF+E+ ++ +Y++++ Y + E
Sbjct: 256 VHADLTA-GNS---LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 311
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M +V PD++T + AC L L+ G + G ++ + ++++++Y
Sbjct: 312 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 371
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG+++ + F M +D+V W++MI G +G +EA + M G D V +
Sbjct: 372 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 431
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
L+ AC+ G F + HGY L ++ +VD+ ++ G LD A +
Sbjct: 432 CLLSACSHSGLVIEGKHWFHVMGHGYG----LTPRMEHYICMVDLLSRGGFLDEAYEFIQ 487
Query: 237 NMS-RINIVTWGALI 250
+M R ++ W AL+
Sbjct: 488 SMPLRADVRVWVALL 502
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 204/620 (32%), Positives = 318/620 (51%), Gaps = 80/620 (12%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMIKE 70
R+IA+Y + ARK+F+ +PL + +NSII A L LY +M K
Sbjct: 67 ARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKL 126
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD T + ++AC SL + + A+++G+ N + V + ++ +Y K G+M +A
Sbjct: 127 GFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDA 186
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA---- 186
F+ M + +V W++M++G N A +KRM+ EG+ + V L+ +
Sbjct: 187 RQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARC 246
Query: 187 -------------------------------CADLGDSRFGLSVHGYSIR---------- 205
CAD+ + +G +HGY ++
Sbjct: 247 GLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVK 306
Query: 206 ----------RHLN------LDVKVQT-----SLVDMYAKTGHLDLASHVFKNMS----- 239
+H+ L++K + +L+ YA++G D A F +M
Sbjct: 307 NALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSD 366
Query: 240 -----RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
R N+++W A+ISGFA G +LEL +MQ + V++ S L CA++ L
Sbjct: 367 DHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAAL 426
Query: 295 KLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LG+ +HGY +R N+++G +I+MY KCG +FD ++ RDLISWN +I Y
Sbjct: 427 NLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGY 486
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G+HG GE AL F +MI +KPD+ TF ++LSA SH+GLV GR FD MV++++I+P
Sbjct: 487 GMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPN 546
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
+HYACMVDLL RAG ++EA IV +M EP VW ALL+ C +K I E+ A ++L
Sbjct: 547 VEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQIL 606
Query: 474 KLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
L G L+SN +A +W++ A VR + R G+KK+PG S +EV +++ F +
Sbjct: 607 TLKSKITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGN 666
Query: 534 KSHNQYEDIVYVLKKLYLEM 553
H EDI +L++L L M
Sbjct: 667 LVHFGLEDIYVILEELNLHM 686
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 45/338 (13%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL---VCWSSMINGLVFNGQPREAVDAYKRM 168
F+ + ++ +Y + ++ A F+ + + L + W+S+I V +G + A++ Y M
Sbjct: 64 FLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEM 123
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+K G D + +I+AC+ LG S VH ++++ + V LV MY K G +
Sbjct: 124 RKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRM 183
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQN-------------------------------- 256
+ A +F M +IV+W ++SG+A N
Sbjct: 184 EDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSH 243
Query: 257 ---GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
GL TLEL M++ G E + +L L CA + + GK IHGY V+ ++ L
Sbjct: 244 ARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYL 303
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE- 371
+ ++I Y K A +F ++++++L+SWN +I+SY G +EA + FL M +
Sbjct: 304 FVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKS 363
Query: 372 -----TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
++V+P+ ++++++S ++ G E+ F M
Sbjct: 364 DSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQM 401
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 288/529 (54%), Gaps = 34/529 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
RK+F+E+ R V YN +I +Y + L ++ +M+ RPD+ T+ LKAC
Sbjct: 72 TRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSC 131
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+L+ G I +++G ++FVG+ ++ +Y KCG + EA F++M KD+V W+SM
Sbjct: 132 SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ G N + +A++ + M+ G D M L+ A A+
Sbjct: 192 VAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVAN------------------- 232
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ ++ +F N+ R N+++W +I + +N L ++L ++
Sbjct: 233 --------------TSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQ 278
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGV 327
M+ C EPD+++ S L AC + L LG+ IH Y ++ NL+L S+IDMY++CG
Sbjct: 279 MEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGC 338
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A+ +FD+M+ RD+ SW +I++YG+ G G A++LF +M+ + PD F ++LSA
Sbjct: 339 LDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSA 398
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SHSGL++EGR +F M Y+I P +HYAC+VDLL RAG V+EA I+ M EP
Sbjct: 399 CSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNER 458
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW LLS C IG A +L+L P+ G + L+SN +A +W+EV +R M+
Sbjct: 459 VWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMK 518
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ ++K PG S VE+N ++H F+ D SH Q ++I L L +M+ +
Sbjct: 519 RKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKEL 567
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 12/234 (5%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
+++ K+F L + + ++N +I Y + P + + LY QM K V PD+ TF L
Sbjct: 237 NVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLP 296
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC L L +G I + ++ + +S++++Y +CG +++A F++M+ +D+
Sbjct: 297 ACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVAS 356
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+S+I+ GQ AV + M G D + + ++ AC S GL G
Sbjct: 357 WTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSAC-----SHSGLLDEGRIY 411
Query: 205 RRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
+ + D ++ LVD+ + G +D A ++ K M N W L+S
Sbjct: 412 FKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A+++F+ + R V ++ S+I AY + L+ +M+ PD
Sbjct: 329 LIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPD 388
Query: 76 SSTFTVALKAC 86
S F L AC
Sbjct: 389 SIAFVAILSAC 399
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 295/542 (54%), Gaps = 14/542 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG--LYNQMIKEDVRPDSSTFTVALKAC 86
A +F +P R + +N+++ Y+ + L QM +RP++ST L
Sbjct: 179 AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 238
Query: 87 VSLMDLKMGEEIWRKAVELGYGND----------VFVGSSMLNLYVKCGKMNEAMVAFEK 136
L G + + ++ V +G+++L++Y KCG + A F+
Sbjct: 239 AQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 298
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
M ++ V WS++I G V + +A +K M +G+ + ++ACA L R
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 358
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ D+ SL+ MYAK G +D A +F M+ + V++ AL+SG+ Q
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 418
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVL 314
NG A + +MQ+C EPD+ ++VS + AC+ + L+ G+ HG + R +
Sbjct: 419 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 478
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY+KCG +R +F+ M SRD++SWN +IA YGIHG G+EA +LFL+M
Sbjct: 479 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 538
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF LLSA SHSGLV EG++WF +M Y + P +HY CMVDLL+R G ++EA
Sbjct: 539 PPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAY 598
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM + VWVALL C +K +G+KV++ + +L P+ G L+SN ++
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 658
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++E A VR + G KK PG S +E+NG LHAF+ D+SH Q +I L + + ++
Sbjct: 659 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK 718
Query: 555 AI 556
+
Sbjct: 719 KL 720
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 243/483 (50%), Gaps = 32/483 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEV---LGLYNQMIKEDVRPDSSTFTVALKA 85
A LF+++P V TYN +I AYS SP L LY +M++ V P++ TF ALKA
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYS-SSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKA 134
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C +L D G I R A+ G D+FV +++L++YVKC + +A F M +DLV W
Sbjct: 135 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 194
Query: 146 SSMINGLVFNGQPREAVDAY--KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
++M+ G +G AV +M+ + + ++ L+ A G G SVH Y
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYR 254
Query: 204 IRR--HLNLDVKVQ--------TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
IR H N + K + T+L+DMYAK G L A VF M N VTW ALI GF
Sbjct: 255 IRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGF 314
Query: 254 AQNGLAGSTLELLMEMQS---CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
L M + C P S++ SAL ACA + L++G+ +H +
Sbjct: 315 VLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVH 372
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L G S++ MY+K G+ A ALFD+M +D +S++ +++ Y +G EEA +F +M
Sbjct: 373 ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM 432
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
V+PD +T SL+ A SH ++ GR ++ + T A ++D+ A+ G
Sbjct: 433 QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-LIDMYAKCGR 491
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN-----PDDLGIHA 484
++ + ++ + M + + W +++G H +G++ L++N PD +
Sbjct: 492 IDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGKEATALFLEMNNLGFPPDGVTFIC 547
Query: 485 LVS 487
L+S
Sbjct: 548 LLS 550
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 180/343 (52%), Gaps = 8/343 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ AR++F+ +P R T++++I + + L+ M+ + +
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 76 SST-FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S T AL+AC SL L+MGE++ + G D+ G+S+L++Y K G +++A+ F
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD V +S++++G V NG+ EA +K+M+ ++ D M+ LI AC+ L +
Sbjct: 399 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 458
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG I R L + + +L+DMYAK G +DL+ VF M +IV+W +I+G+
Sbjct: 459 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 518
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+GL L +EM + GF PD V+ + L AC+ G + GK H + V R + L
Sbjct: 519 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK--HWFHVMRHGYGLTP 576
Query: 315 G----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
++D+ S+ G A M R D+ W ++ +
Sbjct: 577 RMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 127/256 (49%), Gaps = 16/256 (6%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ +L+A GNS ++++Y I A LF+E+ ++ +Y++++ Y + E
Sbjct: 371 VHADLTA-GNS---LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M +V PD++T + AC L L+ G + G ++ + ++++++Y
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG+++ + F M +D+V W++MI G +G +EA + M G D V +
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Query: 182 GLIQACADLGDSRFGLSVHG---YSIRRH---LNLDVKVQTSLVDMYAKTGHLDLASHVF 235
L+ AC S GL + G + + RH L ++ +VD+ ++ G LD A
Sbjct: 547 CLLSAC-----SHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601
Query: 236 KNMS-RINIVTWGALI 250
++M R ++ W AL+
Sbjct: 602 QSMPLRADVRVWVALL 617
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNG--LAGSTLELLMEMQSCGFEPDSVSLV 282
+GHL A H+F + ++ T+ LI ++ + A L L M P++ +
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
AL AC+ + G++IH + + +L + T+++DMY KC A +F M +R
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 342 DLISWNVIIASYGIHG--HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
DL++WN ++A Y HG H A L +QM ++P+ ST +LL L+ G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 400 WFDLMV---------SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+ SK K+ ++D+ A+ G + A ++ D+M + W
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV-TWS 308
Query: 451 ALLSG 455
AL+ G
Sbjct: 309 ALIGG 313
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/525 (36%), Positives = 292/525 (55%), Gaps = 42/525 (8%)
Query: 29 ARKLFEELPLRGVDTYNSII--IAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC 86
A L +L + YN+II +A S +S E L +Y QM+ + + PD+ T LKAC
Sbjct: 92 ALSLLAQLRTPNLPLYNAIIRGLATSNNDS-IEGLVVYKQMLSKGIVPDNYTIPFVLKAC 150
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
++ GEE+ +A+++G +DV+V ++++ +Y C + A F+ ++DLV W+
Sbjct: 151 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWT 210
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI G V G RE V GL Y IR
Sbjct: 211 TMIQGYVKMGFAREGV---------------------------------GL----YIIRN 233
Query: 207 -HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
++NLDV V +LVDMY K G + A VF+ M N+V+W ++ISG AQ G +L +
Sbjct: 234 SNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYM 293
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
+MQ G +PD V+LV+ L +CA +G L+LGK +H Y R + + +G +++DMY+K
Sbjct: 294 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 353
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F M +D+ S+ +I +HG G +AL LF +M + ++PD TF +
Sbjct: 354 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 413
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+A SH GLVEEGR +F+ M + Y ++P +HY CMVDLL RAG + EA + + +M EP
Sbjct: 414 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEP 473
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
V ALL C H K +GE V KK+ K+ P G + L+SN ++ +W + +RK
Sbjct: 474 DAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 533
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
TM++ ++K PG S +E++G +H F DKSH + ++I +L ++
Sbjct: 534 TMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEI 578
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 204/426 (47%), Gaps = 72/426 (16%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + I SARK+F+ P R + ++ ++I Y + E +GLY
Sbjct: 181 LMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLY----------- 229
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + V+L DVFVG++++++Y+KCG N A F+
Sbjct: 230 -----IIRNSNVNL--------------------DVFVGNALVDMYLKCGDANFARKVFQ 264
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K++V W+SMI+GL GQ +E++ +++M++ G+ D+V ++ ++ +CA+LG
Sbjct: 265 EMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLEL 324
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y R + D + +LVDMYAK G +D A VF+ M+R ++ ++ A+I G A
Sbjct: 325 GKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAM 384
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G G L+L EM G EPD V+ V L AC+ +G ++ G+ + F+
Sbjct: 385 HGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR-------KYFE------ 431
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
DM S L Q++ + ++ G G EA M ++
Sbjct: 432 ----DM-------STIYNLRPQLE-----HYGCMVDLLGRAGLINEAEEFIRNM---PIE 472
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYACMVDLLARAGEVEEAL 434
PD +LL A G VE G +M KI+P + Y M ++ + A +AL
Sbjct: 473 PDAFVLGALLGACKIHGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDAL 529
Query: 435 KIVDSM 440
K+ +M
Sbjct: 530 KLRKTM 535
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 47/302 (15%)
Query: 5 NLSAY-GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
NL + GN+ ++ +Y D ARK+F+E+P++ V ++NS+I ++K E L +
Sbjct: 237 NLDVFVGNA---LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYM 293
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ +M + V+PD T L +C +L L++G+ + D F+G++++++Y K
Sbjct: 294 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 353
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG +++A F+ M RKD+ +++MI GL +GQ +A+D + M K GI+ DEV +G+
Sbjct: 354 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 413
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS---- 239
+ AC S GL G R++ F++MS
Sbjct: 414 LTAC-----SHVGLVEEG---RKY---------------------------FEDMSTIYN 438
Query: 240 -RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
R + +G ++ + GL E + M EPD+ L + L AC G ++LG+
Sbjct: 439 LRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP---IEPDAFVLGALLGACKIHGKVELGE 495
Query: 299 SI 300
S+
Sbjct: 496 SV 497
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 309/535 (57%), Gaps = 3/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y N ++ R++F+++ LR ++N++I YS+ E + L+ +M+ + +PD
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPD 315
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L+AC L DL+ G+ + + GY D + ++N+Y KCG + + F
Sbjct: 316 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 375
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ KD V W+SMIN + NG EA+ +K MK + + D V + L+ LGD
Sbjct: 376 GMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHL 434
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + N ++ V +LVDMYAK G + + VF+NM +I+TW +I+
Sbjct: 435 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 494
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ L ++ M++ G PD +++S L C+ + + GK IHG + + ++ +
Sbjct: 495 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 554
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +I+MYSKCG + +F M+++D+++W +I++ G++G G++A+ F +M +
Sbjct: 555 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 614
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH F +++ A SHSGLVEEG +F M YKI+P +HYAC+VDLL+R+ +++A
Sbjct: 615 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 674
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ SM +P ++W ALLS C I E+V++++++LNPDD G + LVSN +A
Sbjct: 675 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALG 734
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW++V +RK+++ G+KK PG S +E+ +++ F K Q+E++ +L L
Sbjct: 735 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGML 789
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 267/494 (54%), Gaps = 10/494 (2%)
Query: 14 GRIIALYGGKNDIVSARKLFE-ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
++IA Y D S+ +F P V +NSII A + E L LY++ + +
Sbjct: 52 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRL 111
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ TF + AC L+D +M + I + +++G+G+D+++G++++++Y + +++A
Sbjct: 112 QPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARK 171
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
FE+M +D+V W+S+I+G NG EA++ Y R + G+ D M +++AC LG
Sbjct: 172 VFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGS 231
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG + + DV V L+ MY K L +F M + V+W +I G
Sbjct: 232 VEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 291
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
++Q GL +++L MEM + F+PD +++ S L AC +G L+ GK +H Y + ++ +
Sbjct: 292 YSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 350
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+I+MY+KCG ++ +F M+ +D +SWN +I Y +G +EA+ LF +M++
Sbjct: 351 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMK 409
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
T VKPD T+ LLS + G + G+ ++K +VD+ A+ GE+
Sbjct: 410 TDVKPDSVTYVMLLSMSTQLGDLHLGKE-LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMG 468
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHAL--VS 487
++LK+ ++M + W +++ C + + ++G ++ ++ + PD + ++ V
Sbjct: 469 DSLKVFENMKARD-IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVC 527
Query: 488 NFFAMEQKWEEVAG 501
+ A +++ +E+ G
Sbjct: 528 SLLAAKRQGKEIHG 541
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 313/542 (57%), Gaps = 6/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y ++ A ++ + V T+NS+I Y + E L + MI +PD
Sbjct: 305 LIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPD 364
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + A L +L G E+ ++ G+ +++ VG++++++Y KC AF
Sbjct: 365 EVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFL 424
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KDL+ W+++I G N EA+ ++ + K+ ++ DE+++ +++AC+ L
Sbjct: 425 MMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLI 484
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H + +R+ L +D +Q LVD+Y K ++ AS VF+++ ++V+W ++IS A
Sbjct: 485 VKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSAL 543
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG +EL M G DSV+L+ L A A + LK G+ IHGY +R+ F +
Sbjct: 544 NGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSI 603
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+DMY+ CG A+A+FD+++ + L+ + +I +YG+HG G+ ++ LF +M V
Sbjct: 604 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENV 663
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SH+GL++EGR + +M +YK++P +HY C+VD+L RA V EA
Sbjct: 664 SPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAF 723
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M TEP VW ALL+ C +H + IGE A+++L+L P + G LVSN FA +
Sbjct: 724 EFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQG 783
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLY 550
+W +V VR M+ SGM+K PG S +E++G++H F DKSH + YE + V +KL
Sbjct: 784 RWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLE 843
Query: 551 LE 552
E
Sbjct: 844 RE 845
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 2/370 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
GK+ +S K+F+E+ R +N++I AY P L +Y M E V D +F V
Sbjct: 108 GKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPV 167
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK- 140
LKAC L D++ G E+ V+LG+ + F+ ++++++Y K ++ A F+ Q K
Sbjct: 168 LLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKG 227
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D V W+S+++ +G+ E + ++ M+ G ++ ++ + AC ++ G +H
Sbjct: 228 DAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIH 287
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
++ + +V V +L+ MYA+ G + A + + M+ ++VTW +LI G+ QN +
Sbjct: 288 AAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYK 347
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L+ +M + G +PD VSL S + A ++ L G +H Y ++ +D NL++G ++I
Sbjct: 348 EALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLI 407
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMYSKC + F M +DLISW IIA Y ++ EAL LF + + ++ D
Sbjct: 408 DMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEM 467
Query: 380 TFASLLSALS 389
S+L A S
Sbjct: 468 MLGSILRACS 477
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 245/489 (50%), Gaps = 5/489 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFE 59
++K ++ G V ++++Y + + +A++LF+ +G +NSI+ +YS E
Sbjct: 188 LVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLE 247
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L L+ +M +S T AL AC K+G+EI ++ + +V+V ++++
Sbjct: 248 TLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIA 307
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +CGKM EA M D+V W+S+I G V N +EA+ + M G DEV
Sbjct: 308 MYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVS 367
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ +I A L + G+ +H Y I+ + ++ V +L+DMY+K F M
Sbjct: 368 LTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMH 427
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++++W +I+G+A N L+L ++ E D + L S L AC+ + + + K
Sbjct: 428 EKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKE 487
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
IH + +R+ + V+ ++D+Y KC A +F+ ++ +D++SW +I+S ++G+
Sbjct: 488 IHCHILRKGLIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNE 547
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EA+ LF +M ET + D +LSA + +++GR ++ K A
Sbjct: 548 NEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVA- 606
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNP 477
+VD+ A G+++ A + D + + GL + ++++ G H K S+ + ++P
Sbjct: 607 VVDMYACCGDLQSAKAVFDRIERK-GLLQYTSMINAYGMHGCGKASVELFNKMRHENVSP 665
Query: 478 DDLGIHALV 486
D + AL+
Sbjct: 666 DHISFLALL 674
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 302/542 (55%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + + A LF +P R V ++NS+I+ +++ V+ L+ +M E +R D
Sbjct: 95 VVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRAD 154
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + +SL DLKM E I +++G DV V ++ + Y KCG+ A F+
Sbjct: 155 SVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFD 214
Query: 136 KMQR--KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ + K V W+SMI G Q +AV +K+M G AD ++ L+ +C
Sbjct: 215 GIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVL 274
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + I+ + D++V +L+ MY+K G + A ++F NM V+W A+I+G+
Sbjct: 275 FHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGY 334
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNL 312
A+ G + L M++ G +PD V+++S + C Q G L+LGK I Y T NL
Sbjct: 335 AEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNL 394
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ ++ID+Y+KCG AR LF M + L+SW +IA ++G +EAL LF QM+E
Sbjct: 395 MVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVEL 454
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+H TF ++L A +H+G +E+G F+LM YKI P HY+CM DLL R G ++E
Sbjct: 455 GLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKE 514
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + +M +P + +W LLS C H+ IGE VA + +L P + ++N +A
Sbjct: 515 AFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYAS 574
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KW+ VA +R M+ + K PG S+V+VNG+ H F +ED+ H + I L+ L L+
Sbjct: 575 AGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLALQ 634
Query: 553 MR 554
M+
Sbjct: 635 MK 636
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 234/468 (50%), Gaps = 10/468 (2%)
Query: 38 LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
L V +NS I + + L L+ QM + + P++ TF KAC L++LK +
Sbjct: 16 LWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQI 75
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
+ V+ + D+FV +S++++YVKC ++ A F +M ++D+ W+SMI G G
Sbjct: 76 VHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGF 135
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
V + M EGI AD V ++GL + L D + S+H + I+ ++ DV V +
Sbjct: 136 VDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNT 195
Query: 218 LVDMYAKTGHLDLASHVFKNMSR--INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+ YAK G LA VF + + V+W ++I+G+A + +M GF
Sbjct: 196 WIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFR 255
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
D +++S L +C Q L GK IH + ++ D ++ + ++I MYSKCG AR L
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYL 315
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
FD M + +SW +IA Y G +EA++LF M KPD T SL+S +G +
Sbjct: 316 FDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGAL 375
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
E G+ W D + ++ ++D+ A+ G ++ A ++ +M E L W L++
Sbjct: 376 ELGK-WIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMP-EKSLVSWTTLIA 433
Query: 455 GCHNHKKF--SIGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQKWE 497
GC + +F ++G L L P+ + A++ ++ +E+ WE
Sbjct: 434 GCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWE 481
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 2/242 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I++Y DI SAR LF+ + + ++ ++I Y+ K E + L++ M
Sbjct: 296 INTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGE 355
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD T + C L++G+ I A G +++ V ++++++Y KCG M+ A
Sbjct: 356 KPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARE 415
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F M K LV W+++I G NG+ +EA+ + +M + G+ + + + ++QAC G
Sbjct: 416 LFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGF 475
Query: 193 SRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G + + +N + + + D+ + G L A +NM + ++ W L+
Sbjct: 476 LEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLL 535
Query: 251 SG 252
S
Sbjct: 536 SA 537
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 310/586 (52%), Gaps = 37/586 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALY---GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ +++ L + + A +FE + + +N++ ++ P
Sbjct: 56 MIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 115
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY MI + P+S TF LK+C K G++I ++LGY D+FV +S+
Sbjct: 116 VSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSL 175
Query: 118 LNLYVKCGKMNEAMVAFEK-------------------------------MQRKDLVCWS 146
+++YV+ G++ +A F++ + KD+V W+
Sbjct: 176 ISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWN 235
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G G +EA++ +K M K I DE M+ ++ ACA G G VH +
Sbjct: 236 AMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH 295
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++K+ SL+D+Y+K G L+ A +F+ + ++++W LI G+ L L L
Sbjct: 296 GFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL---VLGTSVIDMYS 323
EM G P+ V+++S L ACA +G + +G+ IH Y +R L TS+IDMY+
Sbjct: 356 QEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYA 415
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A +F+ + + L SWN +I + +HG + A +F +M + ++PD TF
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVG 475
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA S SG+++ GR+ F M YKI P +HY CM+DLL +G +EA +++++M E
Sbjct: 476 LLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEME 535
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C +GE A+ ++K+ P++ G + L+SN +A +W EVA +R
Sbjct: 536 PDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIR 595
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ GMKKVPG S +E++ +H FI+ DK H + +I +L+++
Sbjct: 596 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 213/446 (47%), Gaps = 48/446 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN---EAMVAFEKMQR 139
L C +L L++ I + ++ G N + S +L L V + A+ FE +Q
Sbjct: 40 LHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+L+ W++M G + P A+ Y M G+ + L+++CA + G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN---------------------- 237
HG+ ++ +LD+ V TSL+ +Y + G L+ A VF
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216
Query: 238 ---------MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ ++V+W A+ISG+A+ G LEL EM PD ++V+ + AC
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
AQ G ++LG+ +H + F NL + S++D+YSKCG A LF+ + +D+ISWN
Sbjct: 277 AQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWN 336
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y +EAL LF +M+ + +P+ T S+L A +H G ++ GR W + + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR-WIHVYIDK 395
Query: 408 YKIQPTEKH--YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK---- 461
T ++D+ A+ G++E A ++ +S+ L+ W A++ G H +
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAA 454
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVS 487
F I ++ K + + PDD+ L+S
Sbjct: 455 FDIFSRMRK--IGIEPDDITFVGLLS 478
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/504 (37%), Positives = 303/504 (60%), Gaps = 12/504 (2%)
Query: 29 ARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVA--LKA 85
A + F+E+ V ++ S+I+AY + + E L L+N+M + V D + FTV + A
Sbjct: 186 ATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFV--DGNEFTVGSLVSA 243
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR----KD 141
C L L G+ + ++ G + ++ +S+LN+YVKCG + +A F++ +D
Sbjct: 244 CTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRD 303
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
LV W++MI G G P A++ +K K GI + V + L+ +CA LG+S G +HG
Sbjct: 304 LVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHG 363
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+++ L+ D V+ +LVDMYAK G + A VF+ M ++V+W ++ISGF Q+G A
Sbjct: 364 LAVKCGLD-DHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYE 422
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVI 319
L L M F PD+V++V L ACA +G L LG S+HG ++ ++ +GT+++
Sbjct: 423 ALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALL 482
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
+ Y+KCG AR +FD M ++ ++W +I YG+ G G +L+LF M+E +V+P+
Sbjct: 483 NFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEV 542
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
F ++L+A SHSG+V EG F+LM + P+ KHYACMVD+LARAG +EEAL ++
Sbjct: 543 VFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIER 602
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
M +P ++V+ A L GC H +F +G KK+L+L+PD+ + LVSN +A + +W V
Sbjct: 603 MPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRWGMV 662
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVN 523
VR+ +++ G+ KVPG S VE++
Sbjct: 663 KQVREMIKQRGLNKVPGCSSVEMD 686
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 231/444 (52%), Gaps = 11/444 (2%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP---DS 76
Y + ARK+F LP R + + +I AY ++P V+ LY ++++ + P D
Sbjct: 75 YASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLY-RLMRLSLHPTPHDY 133
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
F++ K+C D + V+ +D FV + +++ Y K +++EA AF++
Sbjct: 134 VLFSIVFKSCAESRDFQTLTITHCHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDE 192
Query: 137 M-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + D+V W+SMI V N RE + + RM++ +D +E + L+ AC L
Sbjct: 193 IHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQ 252
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI----NIVTWGALIS 251
G VHG+ I+ + ++ + TSL++MY K G++ A VF S ++V+W A+I
Sbjct: 253 GKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIV 312
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G++Q G LEL + + G P+SV++ S L +CAQ+G +GK +HG V+ +
Sbjct: 313 GYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDD 372
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +++DMY+KCGV S AR +F+ M +D++SWN II+ + G EAL+LF +M
Sbjct: 373 HPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGL 432
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ PD T +LSA + G++ G L + + + +++ A+ G+
Sbjct: 433 ELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDAR 492
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A + DSM E W A++ G
Sbjct: 493 AARMVFDSMG-EKNAVTWGAMIGG 515
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 194/457 (42%), Gaps = 55/457 (12%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
LY+ ++ P TF ++ + C +L LK + + G ND+ + + +L+LY
Sbjct: 21 LYHHHGQKQQPPSPPTFYLS-RLCTNLPSLK---TLHASFLIHGLTNDLLLSTKLLSLYA 76
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK--RMKKEGIDADEVVM 180
G++ A F + +DL C+ MI N P V Y+ R+ D V+
Sbjct: 77 SFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLF 136
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-S 239
+ ++CA+ D + H + ++ L D V T LVD YAK +D A+ F +
Sbjct: 137 SIVFKSCAESRDFQTLTITHCHFVKS-LPSDSFVLTCLVDAYAKFARVDEATRAFDEIHE 195
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V+W ++I + QN A L L M+ + + ++ S + AC ++ +L GK
Sbjct: 196 NDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKW 255
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS----RDLISWNVIIASYG 354
+HG+ ++ N L TS+++MY KCG A +FD+ S RDL+SW +I Y
Sbjct: 256 VHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYS 315
Query: 355 IHGHGEEALSLFLQMIETMVKP----------------------------------DHST 380
G+ AL LF + + P DH
Sbjct: 316 QRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDDHPV 375
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+L+ + G+V + R F+ M+ K + + ++ ++GE EAL + M
Sbjct: 376 RNALVDMYAKCGVVSDARCVFEAMLEKDVVS-----WNSIISGFVQSGEAYEALNLFRRM 430
Query: 441 STE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
E P V +LS C + +G V LK
Sbjct: 431 GLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALK 467
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 21/317 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR +FE + + V ++NSII + + +E L L+ +M E PD
Sbjct: 379 LVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPD 438
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T L AC SL L +G + A++ G + ++VG+++LN Y KCG A + F
Sbjct: 439 AVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVF 498
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M K+ V W +MI G G ++ ++ M +E ++ +EVV ++ AC+ G
Sbjct: 499 DSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHSGMVG 558
Query: 195 FGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
G + + LN +K +VDM A+ G+L+ A + M + ++ +GA +
Sbjct: 559 EGSRLFNL-MCGELNFVPSMKHYACMVDMLARAGNLEEALDFIERMPVQPSVSVFGAFLH 617
Query: 252 GFAQNG---LAGSTLELLMEMQSCGFEPDSVS---LVSALLAC-AQIGFLKLGKSIHGYT 304
G + L G+ ++ ++E+ PD LVS L A + G +K + +
Sbjct: 618 GCGLHSRFELGGAAIKKMLELH-----PDEACYYVLVSNLYASDGRWGMVKQVREM---- 668
Query: 305 VRRFDFNLVLGTSVIDM 321
+++ N V G S ++M
Sbjct: 669 IKQRGLNKVPGCSSVEM 685
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 304/594 (51%), Gaps = 78/594 (13%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTY---NSIIIAYSRKESPFEVLGLYNQMIKE 70
R++++Y + ARK+F P + NSII A E L LY +M
Sbjct: 74 ARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNY 133
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V D TF + L+A +L M + + V+ G+ N + VG+ ++ +Y K +M++A
Sbjct: 134 GVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDA 193
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA---- 186
F+KM+ K +V W++M++G +N A + +M+ EG++ + V L+ +
Sbjct: 194 RKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARC 253
Query: 187 -------------------------------CADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
CADL G +HGY ++ N + +
Sbjct: 254 GHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAK 313
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS---- 271
+L+ +Y K G + A +F M N+V+W ALIS FA++G+ LELL +++
Sbjct: 314 NALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAY 373
Query: 272 --------------CGF---------------------EPDSVSLVSALLACAQIGFLKL 296
CGF + +SV++ S L CA + L L
Sbjct: 374 PEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNL 433
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ +HG+ +R R D N+++G +I+MY+KCG +F+++++RD ISWN +IA YG
Sbjct: 434 GREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGT 493
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HG G++AL+ F MI++ +PD TF + LSA SH+GLV EG + F M +KI+P +
Sbjct: 494 HGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIE 553
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HYACMVDLL RAG VEEA I+ M EP +W +LL+ C HK + E+ A K+ L
Sbjct: 554 HYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNL 613
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
N G H L+SN FA +WE+ A VR + R G+KKVPG+S +EV +++ F
Sbjct: 614 NSKITGSHMLLSNIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMF 667
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 169/371 (45%), Gaps = 51/371 (13%)
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
ED+ PD F L+ C + K ++ V G FV + ++++Y + G +++
Sbjct: 35 EDL-PD--FFDHLLRQCNGIQHSK---QVHSATVVTGAYCSAFVSARLVSIYSRYGLVSD 88
Query: 130 AMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
A F + + + W+S+I V++G EA+ Y +M+ G+ D L++A
Sbjct: 89 ARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRA 148
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
++LG ++H + ++ + V L+ MYAK +D A VF M ++V+W
Sbjct: 149 SSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSW 208
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS----------------------- 283
++SG+A N + +M+ G EP+ V+ S
Sbjct: 209 NTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRM 268
Query: 284 ------------ALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
L CA + L G+ IHGY V+ F+ L ++I +Y K G
Sbjct: 269 KGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGD 328
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-----VKPDHSTFASLL 385
A LF +M+ ++L+SWN +I+S+ G ++AL L Q+ E M +KP+ T+++++
Sbjct: 329 AEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQL-EKMEAYPEMKPNVITWSAII 387
Query: 386 SALSHSGLVEE 396
+ GL EE
Sbjct: 388 CGFASKGLGEE 398
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 8/247 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM---S 239
L++ C + S+ VH ++ V LV +Y++ G + A VF +
Sbjct: 44 LLRQCNGIQHSK---QVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFEC 100
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N + W ++I +G L+L +M++ G D + L A + +G + K+
Sbjct: 101 YSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKN 160
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H + V+ F +L +G +I MY+K AR +FD+M+ + ++SWN +++ Y +
Sbjct: 161 LHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYD 220
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
A +F QM V+P+ T+ SLLS+ + G +EE F M K + PT + A
Sbjct: 221 VNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMK-GVGPTAEMLA 279
Query: 419 CMVDLLA 425
++ + A
Sbjct: 280 VVLSVCA 286
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 287/524 (54%), Gaps = 3/524 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR LF+++ + V +++++I +Y R E L L M V+P
Sbjct: 165 LIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPS 224
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY--GNDVFVGSSMLNLYVKCGKMNEAMVA 133
L DLK+G+ + + G + V + ++++++YVKC + A
Sbjct: 225 EIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRV 284
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + + ++ W++MI + E V + +M EG+ +E+ M+ L++ C G
Sbjct: 285 FDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGAL 344
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +++R L + + T+ +DMY K G + A VF + +++ W A+IS +
Sbjct: 345 ELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSY 404
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQN ++ + M CG P+ ++VS L+ CA+ G L++GK IH Y ++ ++
Sbjct: 405 AQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L TS +DMY+ CG A LF + RD+ WN +I+ + +HGHGE AL LF +M
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V P+ TF L A SHSGL++EG+ F MV ++ P +HY CMVDLL RAG ++E
Sbjct: 525 GVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDE 584
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++ SM P +AV+ + L+ C HK +GE AK+ L L P G + L+SN +A
Sbjct: 585 AHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYAS 644
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+W +VA +R+ M+ G+ K PG S +EVNG LH FIM D+ H
Sbjct: 645 ANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREH 688
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 244/458 (53%), Gaps = 14/458 (3%)
Query: 35 ELPLRGVDTYNS-------IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
+PL +++Y+S +I +Y + P + +Y M D D+ LKAC
Sbjct: 76 RVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACC 135
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ +G+E+ V+ G+ DVFV ++++ +Y + G + A + F+K++ KD+V WS+
Sbjct: 136 LIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWST 195
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR-- 205
MI +G EA+D + M + E+ M+ + A+L D + G ++H Y +R
Sbjct: 196 MIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNG 255
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ V + T+L+DMY K +L A VF +S+ +I++W A+I+ + + L
Sbjct: 256 KCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRL 315
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
++M G P+ ++++S + C G L+LGK +H +T+R F +LVL T+ IDMY K
Sbjct: 316 FVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGK 375
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG AR++FD +S+DL+ W+ +I+SY + +EA +F+ M ++P+ T SL
Sbjct: 376 CGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSL 435
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L + +G +E G+ W + K I+ VD+ A G+++ A ++ + +T+
Sbjct: 436 LMICAKAGSLEMGK-WIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF-AEATDR 493
Query: 445 GLAVWVALLSG--CHNHKKFSIGEKVAKKVLKLNPDDL 480
+++W A++SG H H + ++ + L + P+D+
Sbjct: 494 DISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDI 531
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 294/542 (54%), Gaps = 14/542 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG--LYNQMIKEDVRPDSSTFTVALKAC 86
A +F +P R + +N+++ Y+ + L QM +RP++ST L
Sbjct: 179 AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 238
Query: 87 VSLMDLKMGEEIWRKAVEL----------GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
L G + + + V +G+++L++Y KCG + A F+
Sbjct: 239 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 298
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
M ++ V WS++I G V + +A +K M +G+ + ++ACA L R
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 358
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ D+ SL+ MYAK G +D A +F M+ + V++ AL+SG+ Q
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 418
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVL 314
NG A + +MQ+C EPD+ ++VS + AC+ + L+ G+ HG + R +
Sbjct: 419 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 478
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY+KCG +R +F+ M SRD++SWN +IA YGIHG G+EA +LFL+M
Sbjct: 479 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 538
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF LLSA SHSGLV EG++WF +M Y + P +HY CMVDLL+R G ++EA
Sbjct: 539 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 598
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM + VWVALL C +K +G+KV++ + +L P+ G L+SN ++
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 658
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++E A VR + G KK PG S +E+NG LHAF+ D+SH Q +I L + + ++
Sbjct: 659 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK 718
Query: 555 AI 556
+
Sbjct: 719 KL 720
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 243/483 (50%), Gaps = 32/483 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEV---LGLYNQMIKEDVRPDSSTFTVALKA 85
A LF+++P V TYN +I AYS SP L LY +M++ V P++ TF ALKA
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYS-SSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKA 134
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C +L D G I R A+ G D+FV +++L++YVKC + +A F M +DLV W
Sbjct: 135 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 194
Query: 146 SSMINGLVFNGQPREAVDAY--KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
++M+ G +G AV +M+ + + ++ L+ A G G SVH Y
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYC 254
Query: 204 IRR--HLNLDVKVQ--------TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
IR H N + K + T+L+DMYAK G L A VF M N VTW ALI GF
Sbjct: 255 IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGF 314
Query: 254 AQNGLAGSTLELLMEMQS---CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
L M + C P S++ SAL ACA + L++G+ +H +
Sbjct: 315 VLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVH 372
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L G S++ MY+K G+ A ALFD+M +D +S++ +++ Y +G EEA +F +M
Sbjct: 373 ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM 432
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
V+PD +T SL+ A SH ++ GR ++ + T A ++D+ A+ G
Sbjct: 433 QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-LIDMYAKCGR 491
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN-----PDDLGIHA 484
++ + ++ + M + + W +++G H +G++ L++N PD +
Sbjct: 492 IDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGKEATALFLEMNNLGFPPDGVTFIC 547
Query: 485 LVS 487
L+S
Sbjct: 548 LLS 550
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 161/294 (54%), Gaps = 6/294 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ AR++F+ +P R T++++I + + L+ M+ + +
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 76 SST-FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S T AL+AC SL L+MGE++ + G D+ G+S+L++Y K G +++A+ F
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD V +S++++G V NG+ EA +K+M+ ++ D M+ LI AC+ L +
Sbjct: 399 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 458
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG I R L + + +L+DMYAK G +DL+ VF M +IV+W +I+G+
Sbjct: 459 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 518
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-----HGY 303
+GL L +EM + GF PD V+ + L AC+ G + GK HGY
Sbjct: 519 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGY 572
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ +L+A GNS ++++Y I A LF+E+ ++ +Y++++ Y + E
Sbjct: 371 VHADLTA-GNS---LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M +V PD++T + AC L L+ G + G ++ + ++++++Y
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG+++ + F M +D+V W++MI G +G +EA + M G D V +
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Query: 182 GLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
L+ AC+ G F + HGY L ++ +VD+ ++ G LD A +
Sbjct: 547 CLLSACSHSGLVIEGKHWFHVMGHGYG----LTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602
Query: 237 NMS-RINIVTWGALI 250
+M R ++ W AL+
Sbjct: 603 SMPLRADVRVWVALL 617
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNG--LAGSTLELLMEMQSCGFEPDSVSLV 282
+GHL A H+F + ++ T+ LI ++ + A L L M P++ +
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
AL AC+ + G++IH + + +L + T+++DMY KC A +F M +R
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 342 DLISWNVIIASYGIHG--HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
DL++WN ++A Y HG H A L +QM ++P+ ST +LL L+ G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 400 WFDLMV---------SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+ SK K+ ++D+ A+ G + A ++ D+M + W
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV-TWS 308
Query: 451 ALLSG 455
AL+ G
Sbjct: 309 ALIGG 313
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 308/559 (55%), Gaps = 4/559 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y K A LF+E+P R V + S+I Y+ ++ M+++ V+P+
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPN 106
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKC-GKMNEAMVA 133
+ T + LKAC SL L G+ + A+++G G+ ++V ++++++Y C M+ A +
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE + K+ V W+++I G + +++M E + + ACA +G S
Sbjct: 167 FEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS 226
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH I ++ V +++DMY + A +F M++ + +TW LI+GF
Sbjct: 227 NLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF 286
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+ + +L + +M S GF P+ + S + ACA + L G+ +HG + R D NL
Sbjct: 287 -ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL 345
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY+KCG + + +F M+ +L+SW ++ YG HGHG+EA+ LF +M+ +
Sbjct: 346 ELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGS 405
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD F ++LSA SH+GLV+EG +F LM S Y + P YAC+VDLL+RAG V+E
Sbjct: 406 GIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKE 465
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++++M +P ++WVALL C +K+ SI + A KVL++ P+ G + L+SNF A
Sbjct: 466 AYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAA 525
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E W + A +RK MR + KK G S +E+ ++ +FI+ D + +++ VL+ L
Sbjct: 526 EGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLIRH 585
Query: 553 MRAISSWLQGHMEEHEEHD 571
M+ L H+ D
Sbjct: 586 MKDAGYVLDLDCSAHDLED 604
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 176/357 (49%), Gaps = 12/357 (3%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+ ++ Y G EA F++M +D++ W+SMI G A + + M ++G+
Sbjct: 45 TDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAK-TGHLDLAS 232
+ + +++AC L G VHG +I+ + V +L+DMYA +D A
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNAR 164
Query: 233 HVFKNMSRINIVTWGALISGFA--QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
VF+++ N V+W LI+G+ ++ G + M M+ P S S+ A+ ACA
Sbjct: 165 LVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSI--AVSACAS 222
Query: 291 IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
IG LGK +H + F+ NL + +++DMY +C S A+ LF +M +D I+WN +
Sbjct: 223 IGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTL 282
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA + E+L +F QM+ P+ TF S+++A ++ ++ G+ ++ +
Sbjct: 283 IAGFETL-DSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGL 341
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSI 464
E A ++D+ A+ G V ++ KI M L W +++ G H H K ++
Sbjct: 342 DNNLELSNA-LIDMYAKCGNVADSHKIFSGMR-HTNLVSWTSMMIGYGAHGHGKEAV 396
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L T +I Y G A LFD+M RD+I+W +I Y H A ++F M+
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-------SKYKIQPTEKHYACMVDLLAR 426
VKP+ T +++L A + G+ L + S Y YA D +
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
A V E + +++S W L++G + H++ + G
Sbjct: 163 ARLVFEDIGTKNAVS-------WTTLITG-YTHRRDAFG 193
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 306/526 (58%), Gaps = 6/526 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F+EL + T+NS+I +++ E L + + +++PD + L A
Sbjct: 166 AARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGR 225
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L G+EI A++ +++ +G++++++Y KC + A + F+KM KDL+ W+++
Sbjct: 226 LGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTV 285
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I N EA+ ++++ +G+D D +++ + AC+ L VHGY+++R L
Sbjct: 286 IAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL 345
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ D+ +Q ++D+YA G+++ A+ +F+++ ++V+W ++IS + NGLA L +
Sbjct: 346 S-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYL 404
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ EPDS++LVS L A A + L GK IHG+ R+ F S++DMY+ CG
Sbjct: 405 MKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGS 464
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F +S+ L+ W +I +YG+HG G+ A+ LF M + + PDH TF +LL A
Sbjct: 465 LENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYA 524
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SHSGL+ EG+ + M KY+++P +HYAC+VDLL RA +EEA V SM EP
Sbjct: 525 CSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAE 584
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW A L C H +GE A+K+L L+PD G + L+SN FA +W++V VR M+
Sbjct: 585 VWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMK 644
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKL 549
G+KK PG S +EV ++H F++ DKSH + Y+ + + +KL
Sbjct: 645 GGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKL 690
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 263/475 (55%), Gaps = 7/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++Y NDI+ ARKLF+ + R V ++NSII AYS E LGL+ +M K V
Sbjct: 51 LVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGA 110
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
++ T AL+AC K+G EI ++ DV+V ++++ ++V+ GKM+ A F
Sbjct: 111 NTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIF 170
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ KD + W+SMI G NG EA+ + ++ + DEV ++ ++ A LG
Sbjct: 171 DELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLL 230
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y+++ L+ ++++ +L+DMY+K + A VF M ++++W +I+ +A
Sbjct: 231 NGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYA 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QN L+LL ++Q+ G + D++ + S LLAC+ + L K +HGYT++R +L++
Sbjct: 291 QNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMM 350
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ID+Y+ CG + A +F+ ++ +D++SW +I+ Y +G EAL +F M ET V
Sbjct: 351 QNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSV 410
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEA 433
+PD T S+LSA + + +G+ + K + ++ + + +VD+ A G +E A
Sbjct: 411 EPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNS--LVDMYACCGSLENA 468
Query: 434 LKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
K+ ++ L +W +++ G H K ++ + KL PD + AL+
Sbjct: 469 YKVFICTRSKS-LVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALL 522
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 225/422 (53%), Gaps = 27/422 (6%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS TF LKAC + D+ G EI ++ GY + VFV +S++++Y KC + A F
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 135 EKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
++M +R D+V W+S+I+ NGQ EA+ ++ M+K G+ A+ ++ +QAC D
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G+ +H ++ + LDV V +LV M+ + G + A+ +F + + +TW ++I+GF
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGF 188
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNL 312
QNGL L+ +Q +PD VSL+S L A ++G+L GK IH Y ++ + D NL
Sbjct: 189 TQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNL 248
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM--- 369
+G ++IDMYSKC + A +FD+M ++DLISW +IA+Y + EAL L ++
Sbjct: 249 RIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTK 308
Query: 370 ---IETMVKPDHSTFASLLSALSHSGLVEE---GRYWFDLMVSKYKIQPTEKHYACMVDL 423
++TM+ S L LSH+ V R DLM+ ++D+
Sbjct: 309 GMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNM-----------IIDV 357
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF---SIGEKVAKKVLKLNPDDL 480
A G + A ++ +S+ + + W +++S C+ H ++G K + PD +
Sbjct: 358 YADCGNINYATRMFESIKCKD-VVSWTSMIS-CYVHNGLANEALGVFYLMKETSVEPDSI 415
Query: 481 GI 482
+
Sbjct: 416 TL 417
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 20/315 (6%)
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M+ G+ D +++AC + D G +HG I+ + V V SLV MYAK
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 228 LDLASHVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ A +F M+ R ++V+W ++IS ++ NG L L EMQ G ++ +LV+AL
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 287 ACAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC F KLG IH ++ ++ + +++ M+ + G S A +FD++ +D I+
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG-------- 397
WN +IA + +G EAL F + + +KPD + S+L+A G + G
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ W D S +I T ++D+ ++ V A + D M + L W +++
Sbjct: 241 KNWLD---SNLRIGNT------LIDMYSKCCCVAYAGLVFDKMINKD-LISWTTVIAAYA 290
Query: 458 NHKKFSIGEKVAKKV 472
+ + K+ +KV
Sbjct: 291 QNNCHTEALKLLRKV 305
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 313/581 (53%), Gaps = 41/581 (7%)
Query: 46 SIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG------EEIW 99
+++ + R P LGL+ +++++ + D+ TF A+KA + + + G E I
Sbjct: 106 TMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIH 165
Query: 100 RKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
A++ G+ G V VG+++++ Y +++A F++M +D+V W+++++G G
Sbjct: 166 CAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLA 225
Query: 159 REAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRFGLSVHGY----SIRRHLNLD-- 211
EA + RM G+ + V ++ + A +G FG+ +H Y + R +NLD
Sbjct: 226 DEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNA 285
Query: 212 -------------------------VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
V TS+V+ YAK G L+ A +FK+M R N+V+W
Sbjct: 286 LVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSW 345
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTV 305
+I+ ++Q + L EM + G +P +LVS L ACAQ+G L LG+ I+ Y V
Sbjct: 346 SCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIV 405
Query: 306 -RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ + LG ++IDM++KCG A LFD+M R+++SWN +I ++ +HG EEA+
Sbjct: 406 SNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIR 465
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF Q+ + PD TF LL++ SHSGLV EGR +F M Y+I+P +HYACM+DLL
Sbjct: 466 LFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLL 525
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
+ G +EEA ++ M E A W ALL+ C H IG VA K+++L+P D GI+
Sbjct: 526 GKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYV 585
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L+S +A + KW++V +R TMR G+KK PG S +EV G+ H F++ D SH E+I
Sbjct: 586 LMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYS 645
Query: 545 VLKKLYLEMRAISSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
LK +Y ++ QG + E LS Y T L
Sbjct: 646 ALKNIYFHLKQEDMSWQGTIGNLIEPRFLSFPFSYKQTTVL 686
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 183/412 (44%), Gaps = 38/412 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP 74
++ Y + A K+F+E+P R V ++ +++ Y+R E L+ +M + +RP
Sbjct: 184 LVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRP 243
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELG----------------------YGNDVF 112
++ T A+ A + L G + + E G Y +VF
Sbjct: 244 NAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVF 303
Query: 113 VG---------SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G +SM+N Y KCG + A F+ M R+++V WS MI QP EAV
Sbjct: 304 DGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVW 363
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH-GYSIRRHLNLDVKVQTSLVDMY 222
++ M G+D + ++ ++ ACA LG G ++ Y + + L V + +L+DM+
Sbjct: 364 LFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMF 423
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
AK G + AS +F M+ N+V+W +I A +G + + L +++ PD ++ +
Sbjct: 424 AKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFL 483
Query: 283 SALLACAQIGFLKLGKSIHG--YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ- 339
L +C+ G + G+ R + + +ID+ K G+ A + M
Sbjct: 484 GLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPM 543
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
D W ++ + +HG+ E + +++E + P S L+S + S
Sbjct: 544 EADEAGWGALLNACRMHGNVEIGACVADKLVE--LDPSDSGIYVLMSQIYAS 593
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 288/534 (53%), Gaps = 29/534 (5%)
Query: 59 EVLGLYNQMIKEDVRPDSS---TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGS 115
+ + L+ +M + P SS + ALK+C +L +G + A+ G D F +
Sbjct: 31 DAVSLFLRM-RASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTAN 89
Query: 116 SMLNLYVK--CGKMNEAMVA-----------------FEKMQRKDLVCWSSMINGLVFNG 156
++LNLY K C ++ VA F++M +D+V W++++ G G
Sbjct: 90 ALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEG 149
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
+ EA+ ++M +EG D + ++ A+ D + GL VHG++ R + DV V +
Sbjct: 150 RHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGS 209
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
SL+DMYA D + VF N+ + + W +L++G AQNG L + M G P
Sbjct: 210 SLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRP 269
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALF 335
V+ S + C + L+ GK +H Y + F+ N+ + +S+IDMY KCG S A +F
Sbjct: 270 VPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIF 329
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D+M S D++SW +I Y +HG EAL LF +M KP+H TF ++L+A SH+GLV+
Sbjct: 330 DKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVD 389
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+G +F M + Y I PT +H+A + D L RAGE++EA + M +P +VW LL
Sbjct: 390 KGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C HK + E+VAKK+++L P +G H ++SN ++ +W E A +R++MRK GMKK P
Sbjct: 450 CRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDP 509
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEHEE 569
S +EV +LH F+ D+SH Y+ I+ L +M +GH+ E+
Sbjct: 510 ACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAR-----EGHVPNTED 558
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 157/291 (53%), Gaps = 1/291 (0%)
Query: 8 AYGNSVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
+Y +S G I+ + G S RK+F+E+ R V ++N++++ + + E LG +
Sbjct: 101 SYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRK 160
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M +E RPDS T + L D+K G E+ A G+ +DVFVGSS++++Y C +
Sbjct: 161 MCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTR 220
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ ++ F+ + +D + W+S++ G NG EA+ ++RM + G+ V LI
Sbjct: 221 TDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPV 280
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C +L RFG +H Y I +V + +SL+DMY K G + +A +F MS ++V+W
Sbjct: 281 CGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSW 340
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
A+I G+A +G A L L M+ +P+ ++ ++ L AC+ G + G
Sbjct: 341 TAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKG 391
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 304/579 (52%), Gaps = 37/579 (6%)
Query: 1 MIKTNLSAYGNSVGRII---ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ ++I L + + A +FE + + +N++ ++ P
Sbjct: 10 MIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 69
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY MI + P+ TF LK+C + G++I ++LGY D++V +S+
Sbjct: 70 VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 129
Query: 118 LNLYVKCGKMNEAMVAFEKMQR-------------------------------KDLVCWS 146
+++YV+ G++ +A F++ KD+V W+
Sbjct: 130 ISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWN 189
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G G +EA++ +K M K + DE M+ ++ ACA G VH +
Sbjct: 190 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH 249
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++K+ +L+D+Y K G ++ A +F+ +S ++++W LI G+ L L L
Sbjct: 250 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG---TSVIDMYS 323
EM G P+ V+++S L ACA +G +++G+ IH Y +R TS+IDMY+
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 369
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A+ +FD + +R L SWN +I + +HG A +F +M + ++PD TF
Sbjct: 370 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 429
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHSG+++ GR+ F M YKI P +HY CM+DLL +G +EA +++++M E
Sbjct: 430 LLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 489
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C H +GE A+ ++K+ P + G + L+SN +A +W EVA +R
Sbjct: 490 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIR 549
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ GMKKVPG S +E++ +H FI+ DK H + +I
Sbjct: 550 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 588
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 43/295 (14%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD---LASHVFKNMSRINIVTWGALISGFAQ 255
+H I+ L+ + L++ + H D A VF+ + N++ W + G A
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ S L L + M S G P+ + L +CA+ + G+ IHG+ ++ +D +L +
Sbjct: 66 SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSR-------------------------------DL 343
TS+I MY + G AR +FDQ R D+
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---W 400
+SWN +I+ Y G+ +EAL LF +M++T V+PD ST S++SA + S +E GR W
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
D + K ++DL + GEVE A + + +S + ++ W L+ G
Sbjct: 246 ID----DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS-WNTLIGG 295
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 304/559 (54%), Gaps = 40/559 (7%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
LPL YN +I + R P + L Y +M K V PD T+ L+AC +L +G
Sbjct: 137 LPL----PYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLG 192
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+ A G ++F ++++++Y KCG + A F+ M ++D+V W+SMI+
Sbjct: 193 RAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAV 252
Query: 156 GQPREAVDAYKRMKKEGIDADEVV----------------MMGLIQ-------------- 185
GQ EA++ ++RM+ EG + + V +GLI+
Sbjct: 253 GQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTL 312
Query: 186 -----ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
AC+ +G R G +HG ++R + V +L+ MYA+ ++ A +F+ +
Sbjct: 313 VIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLEC 372
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+VTW ++S FA + A + EM G +P+ V++V+ L CA++ L+ G+ +
Sbjct: 373 PGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQEL 432
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ V+ F +L S+IDMYSK G S A+ +FD M D+IS+ +IA YG+ G G
Sbjct: 433 HGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKG 492
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
AL LF QMI++ +KPDH ++LSA SHSGLV EG F+ MV Y I+P +HY+C
Sbjct: 493 TVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSC 552
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
M+DL ARAG +E+A +++D P +W AL+ CH+ IGE+ A+K+L++ ++
Sbjct: 553 MIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTEN 612
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G + L++N +A W+E+A VRK MR G+ K PG + ++ F++ D+S+
Sbjct: 613 AGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLGNGFTPFLVGDRSNPLA 672
Query: 540 EDIVYVLKKLYLEMRAISS 558
+I VL +L +MR I++
Sbjct: 673 PEIYVVLDELSEQMRNINN 691
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 227/467 (48%), Gaps = 48/467 (10%)
Query: 57 PFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD-----LKMGEEIWRKAVELGYGNDV 111
PF +L ++ + P + T + L+ +L+ L++G ++ ++ LG
Sbjct: 51 PFPLLAF--SRLRRHLPPAAGTSHLLLRPVAALLHHHRSHLRLGVQLHALSLSLGLSRHP 108
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
+ +L++Y + + + L ++ +I+ + +G P +A+ AY+ M K
Sbjct: 109 ILLPRLLSVYTSHPSLLPSAASVAADSTLPLP-YNVLISSCLRHGLPLQALAAYQEMGKN 167
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ D +++ACA+ + G +VH ++ ++ ++ Q +L+ MYAK G L A
Sbjct: 168 GVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASA 227
Query: 232 SHVFKNMSRINIVTWGALISGFAQ--------------------------NGLAGSTLE- 264
VF M + ++V+W ++IS +A N +AG ++
Sbjct: 228 RKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQM 287
Query: 265 --------LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
L+ EM G E D V+LV L AC+++G+L+LGK IHG VR D +
Sbjct: 288 RDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVS 347
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++I MY++C CAR LF ++ +++WN +++S+ + EEA S+F +MI VK
Sbjct: 348 NALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVK 407
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
P++ T + L+ + ++ G+ +V K+ + + ++D+ +++G + A
Sbjct: 408 PNYVTVVTYLALCARVANLQHGQELHGHIV-KHGFKGYRLLWNSLIDMYSKSGRLSVAQN 466
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDL 480
+ D+M + + + ++++G K ++ ++ ++++ + PD +
Sbjct: 467 VFDTMD-DCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHI 512
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 182/395 (46%), Gaps = 41/395 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR--------------KESPFEV- 60
++++Y D+ SARK+F+ + R V ++NS+I +Y+ ++ EV
Sbjct: 214 LMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVN 273
Query: 61 --------------------LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+GL +M++ D T + L AC + L++G+EI
Sbjct: 274 SVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHG 333
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
AV + V ++++ +Y +C M A + F ++ +V W++M++ + E
Sbjct: 334 LAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEE 393
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A ++ M G+ + V ++ + CA + + + G +HG+ ++ + SL+D
Sbjct: 394 ASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLID 453
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY+K+G L +A +VF M +++++ ++I+G+ G L L +M G +PD +
Sbjct: 454 MYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHII 513
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQM 338
+V+ L AC+ G + G+ + V + + + +ID+Y++ G+ A + D
Sbjct: 514 MVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHT 573
Query: 339 QSRDLIS-WNVIIASYGIHGH---GEEALSLFLQM 369
+ W ++ + G+ GE A L+M
Sbjct: 574 PFPPTSTMWAALVGACHDRGNIEIGERAARKLLEM 608
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K Y +I +Y + A+ +F+ + + +Y S+I Y +
Sbjct: 436 IVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVA 495
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
L L+ QMI ++PD L AC + GEE++ K V + YG + S M+
Sbjct: 496 LRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMV-ISYGIKPQMEHYSCMI 554
Query: 119 NLYVKCGKMNEA 130
+LY + G + +A
Sbjct: 555 DLYARAGLLEKA 566
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 295/506 (58%), Gaps = 14/506 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR +FE + V +NS+I YS +P + L Y +M+++ PD TF LKAC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D++ G + V+ G+ +++V + +L++Y+ CG++N + FE + + ++V W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY------ 202
I+G V N + +A++A++ M+ G+ A+E +M+ L+ AC D G HG+
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 203 --SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+ + +V + TSL+DMYAK G L A ++F M +V+W ++I+G++QNG A
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L + ++M G PD V+ +S + A G +LG+SIH Y + F + + +++
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDH 378
+MY+K G A+ F+ ++ +D I+W V+I HGHG EALS+F +M E PD
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
T+ +L A SH GLVEEG+ +F M + ++PT +HY CMVD+L+RAG EEA ++V
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL--GIHALVSNFFAMEQKW 496
+M +P + +W ALL+GC H+ + +++ V + P++L GI+ L+SN +A +W
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAE--PEELGSGIYVLLSNIYAKAGRW 537
Query: 497 EEVAGVRKTMRKSGMKKVPGYSVVEV 522
+V +R++M+ + KV G+S VE
Sbjct: 538 ADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 211/420 (50%), Gaps = 23/420 (5%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+K+ +P S L+ C SL++L + K+ + +V S +++ C +
Sbjct: 1 MMKKHYKPILSQ----LENCRSLVELNQLHGLMIKSSVI---RNVIPLSRLIDFCTTCPE 53
Query: 127 ---MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
++ A FE + + W+SMI G + P +A+ Y+ M ++G D +
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
++AC+ L D +FG VHG+ ++ +++ V T L+ MY G ++ VF+++ + N+
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNV 173
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG- 302
V WG+LISGF N +E EMQS G + + +V L+AC + + GK HG
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF 233
Query: 303 --------YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
Y + FN++L TS+IDMY+KCG AR LFD M R L+SWN II Y
Sbjct: 234 LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS 293
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+G EEAL +FL M++ + PD TF S++ A G + G+ VSK
Sbjct: 294 QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS-IHAYVSKTGFVKDA 352
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLA---VWVALLSGCHNHKKFSIGEKVAKK 471
+V++ A+ G+ E A K + + + +A V + L S H ++ SI +++ +K
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ +AR LF+ +P R + ++NSII YS+ E L ++ M+ + PD
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF ++A + ++G+ I + G+ D + +++N+Y K G A AFE
Sbjct: 317 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+++KD + W+ +I GL +G EA+ ++RM+++G D + +G++ AC+ +G
Sbjct: 377 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 436
Query: 195 FGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
G H L V+ +VD+ ++ G + A + K M + N+ WGAL++G
Sbjct: 437 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSV 279
+ LEL ++S EP+ +
Sbjct: 497 CDIH----ENLELTDRIRSMVAEPEEL 519
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 303/575 (52%), Gaps = 37/575 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++Y + A LF+ L V + S+I ++ + + L + +M PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA-- 133
+ F LK+C +MDL+ GE + V LG D++ G++++N+Y K M +
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 134 ----------------------------------FEKMQRKDLVCWSSMINGLVFNGQPR 159
FE M RKD+V ++++I G +G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+A+ + M + D + ++ ++ D G +HGY IR+ ++ DV + +SLV
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMYAK+ ++ + VF + + ++W +L++G+ QNG L L +M + +P +V
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ S + ACA + L LGK +HGY +R F N+ + ++++DMYSKCG AR +FD+M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
D +SW II + +HGHG EA+SLF +M VKP+ F ++L+A SH GLV+E
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
+F+ M Y + +HYA + DLL RAG++EEA + M EP +VW LLS C
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
HK + EKVA+K+ ++ +++G + L+ N +A +W+E+A +R MRK G++K P S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+E+ + H F+ D+SH + I LK + +M
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 36/389 (9%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLR------------------GVD--------- 42
GN++ + A G +S +F+E+P R G+D
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 43 ------TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE 96
+YN+II Y++ + L + +M D++PDS T + L +D+ G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG 156
EI + G +DV++GSS++++Y K ++ ++ F ++ +D + W+S++ G V NG
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
+ EA+ +++M + V +I ACA L G +HGY +R ++ + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
+LVDMY+K G++ A +F M+ ++ V+W A+I G A +G + L EM+ G +P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARAL 334
+ V+ V+ L AC+ +G + + + N L +V D+ + G A
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 335 FDQMQSRDLIS-WNVIIASYGIHGHGEEA 362
+M S W+ +++S +H + E A
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELA 531
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 318/588 (54%), Gaps = 37/588 (6%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
+ L ++ + ++ +Y + A+++F+ L R ++N++I+A+S+ L +
Sbjct: 136 SGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRI 195
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ +M K DV+P+S+T+ + + L G +I + V G+ D+ V ++++N+Y K
Sbjct: 196 FKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGK 254
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG +EA F+KM+++D+V W+ MI V NG EA++ Y+++ EG + + +
Sbjct: 255 CGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSI 314
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ AC+ + G VH + + R L+ +V V T+LV+MYAK G L+ A VF M +
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA 374
Query: 244 VTWGALISGFA----------------------------------QNGLAGSTLELLMEM 269
V W LI +A QNG A + +++ EM
Sbjct: 375 VAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREM 434
Query: 270 Q-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGV 327
+ G +PD+V+ ++ L ACA +G L K++H + + N+V+ ++I+MY++CG
Sbjct: 435 TGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGS 494
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A LF + + ++SW ++A++ +G EAL LF +M VKPD T+ S+L
Sbjct: 495 LEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFV 554
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+H G +E+G +F M + + PT H+A MVDLL R+G + +A ++++SM EP
Sbjct: 555 CTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPV 614
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
W+ L+ C H K +GE A++V +L+P + +SN +A WE+VA VRK M
Sbjct: 615 AWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+ G+KK+PG S +EV+G+LH F K H + ++I L +L+ MRA
Sbjct: 675 ERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRA 722
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 218/424 (51%), Gaps = 12/424 (2%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D +PD+ TF L +C S D+ G + + + D VG++++++Y KC + +A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 131 MVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
FE M +++++V W++MI NG EA+ Y RM +G+ D V + ++ AC+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L R +H L+ + +LV MYA+ G + A +F+++ + +W A
Sbjct: 122 SLAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+I +Q+G L + EM+ C +P+S + ++ + + L G+ IH V
Sbjct: 179 VILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG 237
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
FD +LV+ T++I+MY KCG AR +FD+M+ RD++SWNV+I Y ++G EAL L+
Sbjct: 238 FDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQ 297
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
++ K +TF S+L A S + +GR ++ + + +V++ A+
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYAKC 356
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGIHAL 485
G +EEA K+ ++M +A W L+ G + + + A+KV + D + +A+
Sbjct: 357 GSLEEARKVFNAMKNRDAVA-WSTLI-GAYASNGYGKDARKARKVFDRLGSRDTISWNAM 414
Query: 486 VSNF 489
++ +
Sbjct: 415 ITTY 418
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 252/524 (48%), Gaps = 49/524 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++YG + +V AR +FE + R V ++N++I AY++ E L LY +M + +
Sbjct: 48 LISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLG 107
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D TF L AC S L G EI + G + + ++++ +Y + G + +A
Sbjct: 108 TDHVTFVSVLGACSS---LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRM 164
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ +Q +D W+++I +G A+ +K MK + + + + +I +
Sbjct: 165 FQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVL 223
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + + D+ V T+L++MY K G A VF M + ++V+W +I +
Sbjct: 224 PEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
NG LEL ++ GF+ + VS L AC+ + L G+ +H + + R D +
Sbjct: 284 VLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE----------- 361
+ T++++MY+KCG AR +F+ M++RD ++W+ +I +Y +G+G++
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL 403
Query: 362 -----------------------ALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEG 397
A+ +F +M +KPD TF ++L A + G + E
Sbjct: 404 GSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV 463
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ +S+ +++ ++++ AR G +EEA ++ + + E + W A+++
Sbjct: 464 KA-LHAQISESELESNVVVTNTLINMYARCGSLEEAERLF-AAAKEKTVVSWTAMVAAFS 521
Query: 458 NHKKFSIGEKVAKK--VLKLNPDDL---GIHALVSNFFAMEQKW 496
+ +++ + ++ + + PDD+ I + ++ ++EQ W
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 295/531 (55%), Gaps = 2/531 (0%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ SA++ F+ + R V YN++I A ++ E Y +M + V + +T+ L
Sbjct: 279 DVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILN 338
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC + L+ G+ I E G+ +DV +G++++++Y +CG + +A F M ++DL+
Sbjct: 339 ACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLIS 398
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++I G EA+ YK+M+ EG+ V + L+ ACA+ G +H +
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
R + + + +L++MY + G L A +VF+ ++++W ++I+G AQ+G + +
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYS 323
L EMQ+ EPD+++ S L C L+LGK IHG T ++ LG ++I+MY
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFA 382
+CG AR +F +Q RD++SW +I G +A+ LF QM E PD STF
Sbjct: 579 RCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFT 638
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S+LSA +H+GLV EG F M S+Y + PT +HY C+V LL RA +EA +++ M
Sbjct: 639 SILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPF 698
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
P AVW LL C H ++ E A LKLN + ++ L+SN +A +W++VA +
Sbjct: 699 PPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKI 758
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
R+ M G++K PG S +EV+ +H FI D+SH + +I LK+L +EM
Sbjct: 759 RRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEM 809
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 239/442 (54%), Gaps = 3/442 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++YG D+ AR++F + R V +YN+++ Y++K E LGL+ QM E + PD
Sbjct: 169 LLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPD 228
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L A + L G+ I + VE G +D+ VG++++ + V+CG ++ A AF+
Sbjct: 229 KVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFK 288
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+V ++++I L +G EA + Y RM+ +G+ + + ++ AC+
Sbjct: 289 GIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEA 348
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + + DV++ +L+ MYA+ G L A +F M + ++++W A+I+G+A+
Sbjct: 349 GKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYAR 408
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + L +MQS G +P V+ + L ACA GK IH +R N L
Sbjct: 409 REDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHL 468
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++MY +CG A+ +F+ Q+RD+ISWN +IA + HG E A LF +M +
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD+ TFAS+LS + +E G+ +++ +Q ++++ R G +++A
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHG-RITESGLQLDVNLGNALINMYIRCGSLQDAR 587
Query: 435 KIVDSMSTEPGLAVWVALLSGC 456
+ S+ ++ W A++ GC
Sbjct: 588 NVFHSLQHRDVMS-WTAMIGGC 608
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 244/477 (51%), Gaps = 9/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ A ++F+E+P R V ++NS+I Y+++ + L+ +M P+
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPN 127
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L AC S +L+ G++I + ++ GY D V +S+L++Y KCG + A F
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA 187
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+V +++M+ +E + + +M EGI D+V + L+ A
Sbjct: 188 GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ LN D++V T+LV M + G +D A FK ++ ++V + ALI+ AQ
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQ 307
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G E M+S G + + +S L AC+ L+ GK IH + ++ +
Sbjct: 308 HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI 367
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I MY++CG AR LF M RDLISWN IIA Y EA+ L+ QM V
Sbjct: 368 GNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGV 427
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQPTEKHYA-CMVDLLARAGEVEE 432
KP TF LLSA ++S +G+ D++ S K + H A ++++ R G + E
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK---SNGHLANALMNMYRRCGSLME 484
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
A + + ++ W ++++G H + K+ +++ +L PD++ +++S
Sbjct: 485 AQNVFEGTQARDVIS-WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 213/449 (47%), Gaps = 43/449 (9%)
Query: 69 KEDV------RP---DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+EDV RP D +T+ L+ C L + I + VE G G D+F+ + ++N
Sbjct: 11 REDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLIN 70
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+YVKC + +A F++M R+D++ W+S+I+ G ++A ++ M+ G +++
Sbjct: 71 MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKIT 130
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ AC + G +H I+ D +VQ SL+ MY K G L A VF +S
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V++ ++ +AQ L L +M S G PD V+ ++ L A L GK
Sbjct: 191 PRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH TV + ++ +GT+++ M +CG A+ F + RD++ +N +IA+ HGH
Sbjct: 251 IHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGH 310
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKY 408
EA + +M V + +T+ S+L+A S S +E G+ + D+ +
Sbjct: 311 NVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNA 370
Query: 409 KIQ--------PTEKH------------YACMVDLLARAGEVEEALKIVDSMSTE---PG 445
I P + + ++ AR + EA+++ M +E PG
Sbjct: 371 LISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPG 430
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
++ LLS C N ++ G+ + + +L+
Sbjct: 431 RVTFLHLLSACANSSAYADGKMIHEDILR 459
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 183/373 (49%), Gaps = 21/373 (5%)
Query: 1 MIKTNLSAYGNS----VGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKE 55
+I +++S G+S +G +I++Y D+ AR+LF +P R + ++N+II Y+R+E
Sbjct: 351 LIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRE 410
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGS 115
E + LY QM E V+P TF L AC + G+ I + G ++ + +
Sbjct: 411 DRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLAN 470
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
+++N+Y +CG + EA FE Q +D++ W+SMI G +G A ++ M+ E ++
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
D + ++ C + G +HG L LDV + +L++MY + G L A +VF
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFL 294
++ ++++W A+I G A G +EL +MQ+ GF PD + S L AC G +
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLV 650
Query: 295 KLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARA--------LFDQMQ-SRDLIS 345
G I + VL T I+ Y C V RA L +QM D
Sbjct: 651 LEGYQIFSSMESEYG---VLPT--IEHYG-CLVGLLGRARRFQEAETLINQMPFPPDAAV 704
Query: 346 WNVIIASYGIHGH 358
W ++ + IHG+
Sbjct: 705 WETLLGACRIHGN 717
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 293/536 (54%), Gaps = 7/536 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS ++A Y + A ++F+ +P+R + T+NS++ Y L + +M +
Sbjct: 146 GNS---LLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHE 202
Query: 70 E-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
V+ D AL AC L G E+ + G DV VG+S+L++Y KCG +
Sbjct: 203 GLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIA 262
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F M + +V W+ MI G NG P EA D + +MK EG + V + L+ ACA
Sbjct: 263 SAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACA 322
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
S +G SVHGY R V ++T+L++MY+K G + + +F M+ +V+W
Sbjct: 323 QTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNN 382
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+I+ + + + L +E+ + PD ++ + + A +G L+ + +H Y VR
Sbjct: 383 MIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVR-L 441
Query: 309 DF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
D+ N ++ +V+ MY++CG +R +FD+M +D+ISWN II Y IHG G+ AL +F
Sbjct: 442 DYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMF 501
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M ++P+ STF S+L+A S SG+ +EG F+LM Y I P +HY CM DLL R
Sbjct: 502 SEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGR 561
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG++ E LK ++S+ P +W +LL+ N I E A+++ +L D+ G + ++
Sbjct: 562 AGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVIL 621
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
S+ +A +WE+V +R +M + G+++ S+VE++G +F+ D +H Q + I
Sbjct: 622 SSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTI 677
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 231/442 (52%), Gaps = 9/442 (2%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N +I ++ P L Y M+ RPD TF V +K C L L+ G A+
Sbjct: 75 HNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAI 134
Query: 104 ELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
LG G++V+ G+S+L Y K G + +A F+ M +D+V W+SM++G V NG A+
Sbjct: 135 RLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALAL 194
Query: 163 DAYKRMKKEGIDA--DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
D ++ M EG+ D V ++ + AC G VH Y IR L DVKV TSL+D
Sbjct: 195 DCFREM-HEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLD 253
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY K G + A +F M +VTW +I G+A NG + ++M++ G + + V+
Sbjct: 254 MYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVT 313
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
++ L ACAQ G+S+HGY R +F ++VL T++++MYSK G + +F QM
Sbjct: 314 AINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
++ L+SWN +IA+Y EA++LFL+++ + PD+ T ++++ A GL+ + R
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 433
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG--CH 457
+V + T A M + AR G+V + KI D M+ + ++ W ++ G H
Sbjct: 434 MHSYIVRLDYGENTLVTNAVM-HMYARCGDVVSSRKIFDKMAGKDVIS-WNTIIMGYAIH 491
Query: 458 NHKKFSIGEKVAKKVLKLNPDD 479
K ++ K L P++
Sbjct: 492 GQGKIALEMFSEMKSNGLQPNE 513
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
AL S D NV+I + G E AL+ + M+ +PD TF ++ + G
Sbjct: 62 ALAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLG 121
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+EEGR + + ++ A+ G V +A ++ D M + W ++
Sbjct: 122 ALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR-DIVTWNSM 180
Query: 453 LSG 455
+ G
Sbjct: 181 VDG 183
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 300/522 (57%), Gaps = 2/522 (0%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
+P R + ++ ++I S+ E + + M P F+ A++AC SL ++MG
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+++ A++ G G+++FVGS++ ++Y KCG M +A FE+M KD V W++MI+G
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G+ EA+ A+K+M E + D+ V+ + AC L +FG SVH ++ D+ V
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
+L DMY+K G ++ AS+VF S N+V++ LI G+ + L + +E++ G
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARA 333
EP+ + S + ACA L+ G +H ++ FD + + + ++DMY KCG+ A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
FD++ I+WN +++ +G HG G++A+ +F +M++ VKP+ TF SLL+ SH+GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
VEEG +F M Y + P E+HY+C++DLL RAG ++EA + ++ M EP W + L
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420
Query: 454 SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
C H +G+ A+K++KL P + G L+SN +A E++WE+V VR MR +KK
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480
Query: 514 VPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+PGYS V+V + H F ED SH + I L L +++A
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKA 522
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 174/348 (50%), Gaps = 8/348 (2%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + A K+FEE+P + ++ ++I YS+ E L + +MI E+V D
Sbjct: 85 MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 144
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE-KM 137
L AC +L K G + V+LG+ +D+FVG+++ ++Y K G M A F
Sbjct: 145 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 204
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+ +++V ++ +I+G V Q + + + ++++GI+ +E LI+ACA+ G
Sbjct: 205 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 264
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+H ++ + + D V + LVDMY K G L+ A F + + W +L+S F Q+G
Sbjct: 265 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 324
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG-- 315
L +++ M G +P++++ +S L C+ G ++ G + Y++ + + +V G
Sbjct: 325 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD-YFYSMDK-TYGVVPGEE 382
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+ VID+ + G A+ ++M + W + + IHG E
Sbjct: 383 HYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 314/545 (57%), Gaps = 4/545 (0%)
Query: 8 AYGNSVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
+ +S+G ++I Y +V ARK+F+E+P R + +NS+I +Y R E + +Y +
Sbjct: 107 GFHHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQR 166
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCG 125
M+ + + PD TF+ KA L + G+ ++V LG G ++VFVGS+++++Y K G
Sbjct: 167 MVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG 226
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
KM +A + +++ KD+V ++++I G +G+ E++ ++ M K+GI+A+E + ++
Sbjct: 227 KMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLV 286
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
C +L D G +HG ++ L V QTSL+ MY + G +D + VFK N VT
Sbjct: 287 CCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVT 346
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++I G QNG L +M P+S +L S L AC+ + L+ GK IH +
Sbjct: 347 WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVM 406
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ D + +G ++ID Y KCG AR++F+ + D++S N +I SY +G G EAL
Sbjct: 407 KFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQ 466
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF M +T ++P++ T+ +LSA +++GL+EEG + F + I+ T+ HYACMVDLL
Sbjct: 467 LFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLL 526
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG ++EA +++ ++ + +W LLS C H + ++V +V+ L P+D G H
Sbjct: 527 GRAGRLKEAEMLINQVNISD-VVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHV 585
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L+SN +A W +V ++ MR+ +KK P S V+V E+H F+ D SH + DI
Sbjct: 586 LLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIRE 645
Query: 545 VLKKL 549
L++L
Sbjct: 646 KLEEL 650
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 3/259 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + S ++ +Y + + K+F++ T+ S+I+ +
Sbjct: 304 IVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIA 363
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + QM++ + P+S T + L+AC SL L+ G++I ++ G D +VG+++++
Sbjct: 364 LLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDF 423
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG A F + D+V +SMI NG EA+ + MK G++ + V
Sbjct: 424 YGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTW 483
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+G++ AC + G G + S R N+++ +VD+ + G L A + +
Sbjct: 484 LGVLSACNNAGLLEEGCHIFS-SARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQV 542
Query: 239 SRINIVTWGALISGFAQNG 257
+ ++V W L+S +G
Sbjct: 543 NISDVVIWRTLLSACRIHG 561
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 197/590 (33%), Positives = 328/590 (55%), Gaps = 30/590 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRK---E 55
+ + L+A S ++ YG A ++F+E+P VD ++ ++I AYS +
Sbjct: 78 LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA-------VELGYG 108
F+ G M D V+L A VS + G R+ V+ G+G
Sbjct: 138 EAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+G+SM+++Y C + A F ++++D+V W+S+I+G NG+ A+ ++
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFE 257
Query: 167 RMKKEG---IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL----DVKVQTSLV 219
M EG ++ + V ++ L+++CA+LG VH Y RH +L DV V T+L+
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALL 317
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL----LMEMQSCGFE 275
DM+A+ G+L LA +F + N+V W A+I+G+ Q L L LME G E
Sbjct: 318 DMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVE 377
Query: 276 --PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
P++V+LVS + AC+++G + IH Y V D + + +++IDM +KCG R
Sbjct: 378 VKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGR 437
Query: 333 ALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+F +M +R ++SW+ +I + GIHG G+ AL LF +M +P+ T+ S+LSA SH
Sbjct: 438 QVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSH 497
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GLVE+G+ F+ M Y + PT KHYAC+VDLL RAG ++EA ++ +M + LA+W
Sbjct: 498 AGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWG 557
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
+LL+ CH H +GE V KK+L L+ + +G H L++N + +W++V +R +R+SG
Sbjct: 558 SLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSG 617
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWL 560
++K+PG S +E+ E+++F+ ED+SH + E I L L +R + ++
Sbjct: 618 LRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYV 667
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 223/459 (48%), Gaps = 41/459 (8%)
Query: 42 DTYN-SIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
DT++ + +IA + ++P L + +M V ++ TF LKAC +L L ++
Sbjct: 17 DTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHA 76
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK--DLVCWSSMINGLVFNGQP 158
LG D F +++++ Y KCG A F++M D+V W+++I+ NG
Sbjct: 77 YLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCV 136
Query: 159 REAVDAYKRMK-------KEGIDADEVVMMGLIQACA-DLGDS--RFGLSVHGYSIRRHL 208
EA A+ RM+ E D V + L+ ACA G + R G +VHG ++
Sbjct: 137 DEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGF 196
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELL 266
+ + S+V MY+ + A VF + + ++V+W +LISGF NG A L
Sbjct: 197 GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTF 256
Query: 267 MEMQSCG---FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-----NLVLGTSV 318
+M S G EP+ V++++ L +CA++G ++ +H Y R ++V+ T++
Sbjct: 257 EDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTAL 316
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ------MIET 372
+DM+++CG + AR +FD ++ ++++ W+ +IA Y EEAL LF Q M+
Sbjct: 317 LDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGV 376
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI----QPTEKHYACMVDLLARAG 428
VKP+ T S+++A S G M+ KY + + + ++D+ A+ G
Sbjct: 377 EVKPNAVTLVSVIAACSRLGASRSAS-----MIHKYAVATGLDQDARIASALIDMCAKCG 431
Query: 429 EVEEALKIVDSMSTEPGLAV-WVALLS--GCHNHKKFSI 464
++E ++ M V W +++ G H K ++
Sbjct: 432 DIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRAL 470
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 29/343 (8%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ KD W+S+I P+ A+ + RM+ + ++ L++ACA L
Sbjct: 13 ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR--INIVTWGALISGFA 254
L VH Y R L D +LVD Y K GH A+ VF M +++V+W ALIS ++
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 255 QNGLAGSTLELLMEM---------QSCGFEPDSVSLVSALLACAQIG----FLKLGKSIH 301
NG + M + CG D VSL + + ACA +G L+ G ++H
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGV--DVVSLGALVSACA-VGCGSNCLRRGSAVH 188
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD--QMQSRDLISWNVIIASYGIHGH 358
G V+ F + LG S++ MYS C A +F+ ++ RD++SWN +I+ + ++G
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGE 248
Query: 359 GEEALSLFLQMIE---TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
E AL F M+ + V+P+ T +LL + + G VE + + + S++ K
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308
Query: 416 H---YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ AR G + A +I D + + + W A+++G
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGK-NVVCWSAMIAG 350
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 323/624 (51%), Gaps = 70/624 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYN---SIIIAYSRKESP 57
+IKT S+ R++ YG ARK+F+ +P R +YN S++ + + +
Sbjct: 45 IIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEA 104
Query: 58 F----------------------------EVLGLYNQMIKEDVRPDSSTFTVALKACVSL 89
F E L + M ED + +F AL AC L
Sbjct: 105 FNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGL 164
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
DL MG +I + Y DV++GS+++++Y KCG + A AF+ M +++V W+S+I
Sbjct: 165 TDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLI 224
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HL 208
NG +A++ + M G++ DE+ + ++ ACA R GL +H ++R
Sbjct: 225 TCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKY 284
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVF-------------------------------KN 237
D+ + +LVDMYAK ++ A VF N
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSN 344
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M N+V+W ALI+G+ QNG + L + ++ P + + L ACA + LKLG
Sbjct: 345 MMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLG 404
Query: 298 KSIHGYTVRR-FDF------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
+ H ++ F F ++ +G S+IDMY KCG+ +F++M RD++SWN +I
Sbjct: 405 RQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMI 464
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
Y +G+G AL +F +M+ + KPDH T +LSA SH+GLVEEGR +F M ++ +
Sbjct: 465 VGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGL 524
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P + H+ CMVDLL RAG ++EA ++ +M +P VW +LL+ C H +G+ VA+
Sbjct: 525 APMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAE 584
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
K+++++P + G + L+SN +A +W++V VRK MR+ G+ K PG S +E+ +H F+
Sbjct: 585 KLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFM 644
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMR 554
++DK H +DI VLK L +M+
Sbjct: 645 VKDKRHPLKKDIHLVLKFLTEQMK 668
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 297/528 (56%), Gaps = 2/528 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F + P + YN++I ++ + + +Y M + PD+ TF LKAC
Sbjct: 54 ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTR 113
Query: 89 LMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L +G + ++ G+ DVFV + ++ LY K G + +A F+++ K++V W++
Sbjct: 114 LPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTA 173
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I G + +G EA+ ++ + + G+ D ++ ++ AC+ +GD G + GY
Sbjct: 174 IICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESG 233
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+V V TSLVDMYAK G ++ A VF M ++V W ALI G+A NG+ L++
Sbjct: 234 SVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFF 293
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCG 326
EMQ PD ++V AC+++G L+LG G F N VLGT++ID Y+KCG
Sbjct: 294 EMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCG 353
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ A+ +F M+ +D + +N +I+ + GH A +F QM++ ++PD +TF LL
Sbjct: 354 SVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLC 413
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+H+GLV++G +F M S + + PT +HY CMVDL ARAG + EA ++ SM E
Sbjct: 414 GCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANS 473
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VW ALL GC HK + E V K++++L P + G + L+SN ++ +W+E +R ++
Sbjct: 474 IVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSL 533
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ GM+K+PG S VEV+G +H F++ D SH I L+ L+ ++R
Sbjct: 534 NQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLR 581
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 184/376 (48%), Gaps = 5/376 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARK+F+E+P + V ++ +II Y E LGL+ +++ +RPD
Sbjct: 143 LVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPD 202
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC + DL G I E G +VFV +S++++Y KCG M EA F+
Sbjct: 203 SFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFD 262
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+VCWS++I G NG P+EA+D + M++E + D M+G+ AC+ LG
Sbjct: 263 GMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALEL 322
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G G + + T+L+D YAK G + A VFK M R + V + A+ISG A
Sbjct: 323 GNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAM 382
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
G G+ + +M G +PD + V L C G + G F +
Sbjct: 383 CGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIE 442
Query: 316 --TSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++D+ ++ G+ A+ L M + I W ++ +H + A + Q+IE
Sbjct: 443 HYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIE- 501
Query: 373 MVKPDHSTFASLLSAL 388
++P +S LLS +
Sbjct: 502 -LEPWNSGHYVLLSNI 516
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 188/378 (49%), Gaps = 8/378 (2%)
Query: 83 LKACVS--LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
LK C + L L ++ + LG D ++ + +L + A V F +
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS-RFGLSV 199
++ ++++I G+V N R+AV Y M++ G D +++AC L GLS+
Sbjct: 65 NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H I+ + DV V+T LV +Y+K G L A VF + N+V+W A+I G+ ++G
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSV 318
G L L + G PDS +LV L AC+++G L G+ I GY N+ + TS+
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSL 244
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+DMY+KCG AR +FD M +D++ W+ +I Y +G +EAL +F +M V+PD
Sbjct: 245 VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 304
Query: 379 STFASLLSALSHSGLVEEGRYWFDLM-VSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+ SA S G +E G + LM ++ P ++D A+ G V +A ++
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG--TALIDFYAKCGSVAQAKEVF 362
Query: 438 DSMSTEPGLAVWVALLSG 455
M + V+ A++SG
Sbjct: 363 KGMRRKD-CVVFNAVISG 379
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 306/536 (57%), Gaps = 2/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y AR++F+E+ +R +YN++I Y + E E + ++ + + + +PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L+AC L DL + + I+ ++ G+ + V + ++++Y KCG M A F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ KD V W+S+I+G + +G EA+ +K M AD + + LI L D +F
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + +D+ V +L+DMYAK G + + +F +M + VTW +IS +
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G + L++ +M+ PD + + L CA + +LGK IH +R ++ L +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG + +F++M RD+++W +I +YG++G GE+AL F M ++ +
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD F +++ A SHSGLV+EG F+ M + YKI P +HYAC+VDLL+R+ ++ +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + +M +P ++W ++L C E+V++++++LNPDD G L SN +A +
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
KW++V+ +RK+++ + K PGYS +EV +H F D S Q E I L+ LY
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 243/474 (51%), Gaps = 27/474 (5%)
Query: 14 GRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G++I Y + S+ +F + P + V +NSII A+S+ E L Y ++ + V
Sbjct: 43 GKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKV 102
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD TF +KAC L D +MG+ ++ + +++G+ +D+FVG++++++Y + G + A
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +DLV W+S+I+G +G EA++ Y +K I D + ++ A +L
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G +HG++++ +N V V LV MY K A VF M + V++ +I G
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ + + ++ + +E F+PD +++ S L AC + L L K I+ Y ++ F
Sbjct: 283 YLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +ID+Y+KCG AR +F+ M+ +D +SWN II+ Y G EA+ LF M+
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 372 TMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ DH T+ L+S + HS ++ G DL VS +
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG-ICIDLSVSN-----------AL 449
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+D+ A+ GEV ++LKI SM T + W ++S C F+ G +V ++ K
Sbjct: 450 IDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFGDFATGLQVTTQMRK 502
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 309/535 (57%), Gaps = 3/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y N ++ R++F+++ LR ++N++I YS+ E + L+ +M+ + +PD
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPD 374
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L+AC L DL+ G+ + + GY D + ++N+Y KCG + + F
Sbjct: 375 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 434
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ KD V W+SMIN + NG EA+ +K MK + + D V + L+ LGD
Sbjct: 435 GMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXL 493
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + N ++ V +LVDMYAK G + + VF+NM +I+TW +I+
Sbjct: 494 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 553
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ L ++ M++ G PD +++S L C+ + + GK IHG + + ++ +
Sbjct: 554 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 613
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +I+MYSKCG + +F M+++D+++W +I++ G++G G++A+ F +M +
Sbjct: 614 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 673
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH F +++ A SHSGLVEEG +F M YKI+P +HYAC+VDLL+R+ +++A
Sbjct: 674 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 733
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ SM +P ++W ALLS C I ++V++++++LNPDD G + LVSN +A
Sbjct: 734 DFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALG 793
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW++V +RK+++ G+KK PG S +E+ +++ F K Q+E++ +L L
Sbjct: 794 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGML 848
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 266/494 (53%), Gaps = 10/494 (2%)
Query: 14 GRIIALYGGKNDIVSARKLFE-ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
++IA Y D S+ +F P V +NSII A + E L LY++ + +
Sbjct: 111 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRL 170
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ TF + AC L+D +M + I + + +G+G+D+++G++++++Y + +++A
Sbjct: 171 QPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARK 230
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
FE+M +D+V W+S+I+G NG EA++ Y R + G+ D M +++AC LG
Sbjct: 231 VFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGS 290
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG + + DV V L+ MY K L +F M + V+W +I G
Sbjct: 291 VEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 350
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
++Q GL +++L MEM + F+PD +++ S L AC +G L+ GK +H Y + ++ +
Sbjct: 351 YSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 409
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+I+MY+KCG ++ +F M+ +D +SWN +I Y +G +EA+ LF +M++
Sbjct: 410 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMK 468
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
T VKPD T+ LLS + G + G+ ++K +VD+ A+ GE+
Sbjct: 469 TDVKPDSVTYVMLLSMSTQLGDLXLGKE-LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMG 527
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHAL--VS 487
++LK+ ++M + W +++ C + + ++G ++ ++ + PD + ++ V
Sbjct: 528 DSLKVFENMKARD-IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVC 586
Query: 488 NFFAMEQKWEEVAG 501
+ A +++ +E+ G
Sbjct: 587 SLLAAKRQGKEIHG 600
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 291/531 (54%), Gaps = 6/531 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL--YNQMIKEDVRPDSSTFTVALKAC 86
AR+L +L + ++S+I +S + L Y M + V P TF LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L D + V+ G +D FV +S+++ Y G + A F+ + KD+V W+
Sbjct: 115 FKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G V NG EA+ + MKK G+ A+E+ ++ +++A + D RFG SVHG +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 207 -HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ DV + +SLVDMY K D A VF M N+VTW ALI+G+ Q+ + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EM P+ +L S L ACA +G L G+ +H Y ++ + N GT++ID+Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F+++ +++ +W +I + HG+ +A LF M+ + V P+ TF ++
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA +H GLVEEGR F M ++ ++P HYACMVDL R G +EEA +++ M EP
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW AL C HK + +G+ A +V+KL P G + L++N ++ Q W+EVA VRK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVYVLKKLYLEMR 554
M+ + K PG+S +EV G+L FI +DK + +D+ L + ++MR
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 12/242 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + A+K+F+E+P R V T+ ++I Y + + + ++ +M+K DV P+
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC + L G + ++ + G+++++LYVKCG + EA++ FE
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG---- 191
++ K++ W++MING +G R+A D + M + +EV M ++ ACA G
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
R LS+ G N++ K +VD++ + G L+ A + + M V WGA
Sbjct: 426 GRRLFLSMKG-----RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 249 LI 250
L
Sbjct: 481 LF 482
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 299/510 (58%), Gaps = 14/510 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+KAC L+D G++I ++LG+ DVFV +S++++Y + G + +A F+ M +D
Sbjct: 4 VKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDR 60
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W++MI+G NG EA+D M+ EG+ D + + ++ CA +GD G +H Y
Sbjct: 61 GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
I+ L ++ V +L++MYAK G L A VF + + ++V+W LI+G+AQNGLA
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEA 179
Query: 263 LE--LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVI 319
+E LLME P+ + VS L A + +G L+ G IHG ++ + ++ +GT +I
Sbjct: 180 IEVYLLMEEHE-EIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMY KCG A +LF Q+ ++ + WN +I+ YG+HG GE+AL LF +M VKPDH
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
TF SLLSA SHSGLV + ++ F++M +Y I+P+ KHY CMVDL RAGE+E A +
Sbjct: 299 TFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKK 358
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
M +P + W ALL+ C H +G+ ++++ +++ +++G + L+SN +A KWE V
Sbjct: 359 MPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGV 418
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISS- 558
VR R G++K PG+S + +N ++ F +++H + E+I L+ L +++ I
Sbjct: 419 DDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYV 478
Query: 559 -----WLQGHMEEHEEHDPLSTAAQYAPTY 583
LQ E+ +EH + + + A Y
Sbjct: 479 PDFCFVLQDVEEDEKEHILMGHSERLAIAY 508
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 172/336 (51%), Gaps = 5/336 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARKLF+++P R ++N++I Y + + E L + ++M E V+ D+ T L C
Sbjct: 48 ARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQ 107
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ D+ G+ I ++ G ++FV ++++N+Y K G + A F + KD+V W+++
Sbjct: 108 VGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTL 166
Query: 149 INGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I G NG EA++ Y M++ E I ++ + ++ A + +G + G+ +HG I+
Sbjct: 167 ITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNC 226
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L DV V T L+DMY K G LD A +F + R N V W A+IS + +G LEL
Sbjct: 227 LYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFR 286
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKC 325
EM++ +PD ++ VS L AC+ G + + + L ++D++ +
Sbjct: 287 EMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRA 346
Query: 326 GVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGE 360
G A +M + D +W ++ + IHG+ E
Sbjct: 347 GELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIE 382
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 141/266 (53%), Gaps = 15/266 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
+I +Y + A+K+F L ++ V ++N++I Y++ E + +Y M + E++ P
Sbjct: 136 LINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIP 194
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T+ L A + L+ G I + ++ +DVFVG+ ++++Y KCGK+++A+ F
Sbjct: 195 NQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLF 254
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG--- 191
++ RK+ V W++MI+ +G +A++ ++ MK E + D + + L+ AC+ G
Sbjct: 255 YQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVS 314
Query: 192 DSR--FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
D++ F + Y I+ L K +VD++ + G L++A + K M + + WGA
Sbjct: 315 DAQWCFNMMEEEYGIKPSL----KHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGA 370
Query: 249 LISGFAQNG---LAGSTLELLMEMQS 271
L++ +G L E L E+ S
Sbjct: 371 LLNACRIHGNIELGKHASERLFEVDS 396
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 303/565 (53%), Gaps = 18/565 (3%)
Query: 9 YGNSVGRIIALYGGKNDIVSAR----------------KLFEELPLRGVDTYNSIIIAYS 52
YG S+ + YG ++DI+ + + F+ + + + + N+++ +
Sbjct: 108 YGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFC 167
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF 112
E+ + + Q++ E P+ TF LK C S DL G+ I + ++ G D
Sbjct: 168 DTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSH 227
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ +S++N+Y KCG N A F ++ +D+V W+++I G V G + + +M EG
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEG 286
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ + + ++++C+ L D G VH ++ L+ + V T+LVDMYAK L+ A
Sbjct: 287 FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAE 346
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
+F + + ++ W +++G+AQ+G ++ ++MQ G +P+ +L S+L C++I
Sbjct: 347 TIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIA 406
Query: 293 FLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L G+ +H ++ ++ + ++++DMY+KCG A +FD + SRD +SWN II
Sbjct: 407 TLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIIC 466
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y HG G +AL F M++ PD TF +LSA SH GL+EEG+ F+ + Y I
Sbjct: 467 GYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT 526
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
PT +HYACMVD+L RAG+ E ++ M + +W +L C H GE+ A K
Sbjct: 527 PTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMK 586
Query: 472 VLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIM 531
+ +L P+ + L+SN FA + W++V VR M G+KK PG S VEVNG++H F+
Sbjct: 587 LFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLS 646
Query: 532 EDKSHNQYEDIVYVLKKLYLEMRAI 556
D SH + +I L+ L+ ++ ++
Sbjct: 647 HDGSHPKIREIHLKLQDLHQKLMSV 671
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 231/464 (49%), Gaps = 12/464 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF-- 58
+IK + + ++ +Y + AR++ EE+P++ V +N + S SP+
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKL---SSANSPYPL 71
Query: 59 -EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E + L+ M +R + F + A SL D GE I + G+ +D+ + ++
Sbjct: 72 QEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAF 131
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ +Y+K + F+ M ++L +++++G + ++ EG + +
Sbjct: 132 VTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNM 191
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ +++ CA GD G ++HG I+ +N D + SLV++YAK G + A VF
Sbjct: 192 YTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 251
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++V+W ALI+GF G GS L + +M + GF P+ + +S L +C+ + + LG
Sbjct: 252 IPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H V+ D N +GT+++DMY+K A +F+++ RDL +W VI+A Y
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G GE+A+ F+QM VKP+ T AS LS S ++ GR + + Q +
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG--QSGDMF 428
Query: 417 YA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
A +VD+ A+ G VE+A + D + + ++ W ++ G H
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICGYSQH 471
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 187/381 (49%), Gaps = 7/381 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++I + ++ G D + SS++N+YVKC + A E+M +D+ W+ ++
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
+EAV + M+ I ++ + LI A A LGD+ +G S+H + D+ +
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+ V MY KT ++ FK M N+ + L+SGF +L+++ GFE
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ + +S L CA G L GK+IHG ++ + + L S++++Y+KCG + A +
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F ++ RD++SW +I + G+G L +F QM+ P+ TF S+L + S V
Sbjct: 249 FGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ G+ + K + + +VD+ A+ +E+A I + + + L W +++
Sbjct: 308 DLGKQ-VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVA 365
Query: 455 GCHNHKKFSIGEKVAKKVLKL 475
G + + GEK K +++
Sbjct: 366 G---YAQDGQGEKAVKCFIQM 383
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 302/579 (52%), Gaps = 37/579 (6%)
Query: 1 MIKTNLSAYGNSVGRII---ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ ++I L + + A +F+ + + +N++ ++ P
Sbjct: 25 MIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY MI + P+S TF LKAC + G++I ++LG D++V +S+
Sbjct: 85 VSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSL 144
Query: 118 LNLYVKCGKMNEAMVAFEKMQR-------------------------------KDLVCWS 146
+ +YVK G+ +A F++ KD+V W+
Sbjct: 145 IAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWN 204
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++I+G G +EA++ +K M K + DE M+ ++ ACA G VH +
Sbjct: 205 ALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDH 264
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++K+ +L+D+Y K G ++ AS +F+ +S ++++W LI G+ L L L
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF---DFNLVLGTSVIDMYS 323
EM G P+ V+++S L ACA +G + +G+ IH Y +R L TS+IDMY+
Sbjct: 325 QEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYA 384
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A+ +FD M +R L SWN +I + +HG A +F +M + ++PD TF
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVG 444
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHSG+++ GR+ F M YKI P +HY CM+DLL +G +EA ++++SM +
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMD 504
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C H +GE A+ ++K+ P + G + L+SN +A +W EVA R
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRR 564
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ GMKKVPG S +E++ +H FI+ DK H + +I
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREI 603
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 44/444 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV---KCGKMNEAMVAFEKMQR 139
L C +L L++ I K ++ G N + S ++ V + A+ F+ +Q
Sbjct: 9 LHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+L+ W++M G + P A+ Y M G+ + L++ACA R G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTG-------------HLDLASH------------- 233
HG+ ++ +LD+ V TSL+ MY K G H D+ S+
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185
Query: 234 -----VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+F + ++V+W ALISG+A+ G LEL EM +PD ++V+ L AC
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
AQ ++LG+ +H + F NL + ++ID+Y KCG A LF+ + +D+ISWN
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWN 305
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y +EAL LF +M+ + P+ T S+L A +H G ++ GR W + + K
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGR-WIHVYIDK 364
Query: 408 Y--KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ ++D+ A+ G++E A ++ DSM L+ W A++ G H + +
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR-SLSSWNAMIFGFAMHGRANPA 423
Query: 466 EKVAKKVLK--LNPDDLGIHALVS 487
+ ++ K + PDD+ L+S
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLS 447
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 301/555 (54%), Gaps = 36/555 (6%)
Query: 5 NLSAYGN-SVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
NLS + N S+G +++ Y + + AR +F+ +P R V YN +I +Y + L
Sbjct: 60 NLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALL 119
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
++ M+ PD T+ LKAC +L++G ++ ++G ++FVG+ ++ LY
Sbjct: 120 VFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYG 179
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG + EA ++MQ KD+V W+SM+ G N Q +A+D + M D M
Sbjct: 180 KCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMAS 239
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ A + +Y + +F N+ + +
Sbjct: 240 LLPAVTNTSSENV-------------------------LYVE--------EMFMNLEKKS 266
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W +IS + +N + G +++L ++M C EPD+++ S L AC + L LG+ IH
Sbjct: 267 LVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHE 326
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
Y R+ N++L S+IDMY++CG A+ +FD+M+ RD+ SW +I++YG+ G G
Sbjct: 327 YVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYN 386
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A++LF +M + PD F ++LSA SHSGL+ EG+++F M YKI P +H+AC+V
Sbjct: 387 AVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLV 446
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
DLL R+G V+EA I+ M +P VW ALLS C + IG A K+L+L P++ G
Sbjct: 447 DLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESG 506
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L+SN +A +W EV +R M++ ++K+PG S VE+N ++H F+ D H Q ++
Sbjct: 507 YYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKE 566
Query: 542 IVYVLKKLYLEMRAI 556
I L L +M+ +
Sbjct: 567 IYEELSVLVGKMKEL 581
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 177/396 (44%), Gaps = 36/396 (9%)
Query: 62 GLYNQMIKEDVRPDSSTFTVAL--KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L + + K V P + + L K D+K + + K L + + +G ++
Sbjct: 16 ALVSSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMR 75
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y G+ A F+ + ++++ ++ MI + N +A+ ++ M G D
Sbjct: 76 AYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYT 135
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+++AC+ + R GL +HG + L+L++ V L+ +Y K G L A V M
Sbjct: 136 YPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQ 195
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V+W ++++G+AQN L++ EM +PD+ ++ S L A
Sbjct: 196 SKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA------------ 243
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
V TS ++ +F ++ + L+SWNV+I+ Y +
Sbjct: 244 -------------VTNTSSENVLY-------VEEMFMNLEKKSLVSWNVMISVYMKNSMP 283
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+++ L+LQM + V+PD T AS+L A + GR + V + K+ P
Sbjct: 284 GKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEY-VERKKLCPNMLLENS 342
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ AR G +E+A ++ D M +A W +L+S
Sbjct: 343 LIDMYARCGCLEDAKRVFDRMKFR-DVASWTSLISA 377
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 302/558 (54%), Gaps = 7/558 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKND--IVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M++T L + +I+A + + AR +F ++P T NSII + K
Sbjct: 11 MLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQ 70
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L Y +M+ + + PD TF K+C + + G++I + +LG+ +D + ++++
Sbjct: 71 EALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLM 127
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADE 177
N+Y CG + A F+KM+ K +V W++MI QP EAV + RM K E + +E
Sbjct: 128 NMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNE 187
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V ++ ++ ACA D +H Y V + T L+D+Y K G + LA +F
Sbjct: 188 VTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDK 247
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
N+ +W +I+G ++ L L EMQ+ G + D V++ S LLAC +G L+LG
Sbjct: 248 AQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELG 307
Query: 298 KSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H Y + R D ++ LGT+++DMY+KCG A +F +M +D+++W +I +
Sbjct: 308 KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMC 367
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G E AL F +M VKPD TF +L+A SH+G V+EG F+ M Y IQPT +H
Sbjct: 368 GQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEH 427
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y +VD+L RAG + EA +++ SM P V LL C H E+ AK++L+++
Sbjct: 428 YGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEID 487
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P G + L+SN + +KWEE R+ M + GM+K PG S +EV+G +H F+ D SH
Sbjct: 488 PYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSH 547
Query: 537 NQYEDIVYVLKKLYLEMR 554
Q +I +L+ + +++
Sbjct: 548 RQSSEINEMLEDMISKLK 565
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 193/567 (34%), Positives = 308/567 (54%), Gaps = 7/567 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY IV A ++F+ V +N +++AY + + L+ QM+ VR
Sbjct: 283 GSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVR 342
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C ++ +GE+I +++ G+ +D++V ++++Y K G +++A
Sbjct: 343 PNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRI 402
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
E ++ KD+V W+SMI G V + +EA++ +K M+ GI D + + I ACA +
Sbjct: 403 LEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAM 462
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R G +H + DV + +LV++YA+ G A +F+ + + +TW ++SGF
Sbjct: 463 RQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGF 522
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+GL LE+ ++M G + + + VS++ A A + +K GK IH ++
Sbjct: 523 AQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSET 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I +Y KCG A+ F +M R+ +SWN II S HG G EAL LF QM +
Sbjct: 583 EVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQE 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+ TF +L+A SH GLVEEG +F M S++ I P HYAC+VD+L RAG+++
Sbjct: 643 GLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDR 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K V+ M VW LLS C HK IGE AK +L+L P D + L+SN +A+
Sbjct: 703 ARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAV 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KW VRK M+ G++K PG S +EV +HAF + D+ H I L L
Sbjct: 763 TGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDR 822
Query: 553 MRAISSWLQG-----HMEEHEEHDPLS 574
+ I ++QG H +E E+ DP +
Sbjct: 823 LAKI-GYIQGNYFLFHEKEKEQKDPTA 848
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 224/442 (50%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY K + AR++FE+L R ++ +++ Y+R E +GLY+QM V P
Sbjct: 83 LIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPT 142
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC + G + + + G ++ VG++++ LY++ G ++ A F
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V ++++I+ G A++ ++ M+ G D V + L+ ACA +GD
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y ++ ++ D ++ SL+D+Y K G + A +FK+ R N+V W ++ + Q
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ +L +M + G P+ + L C G + LG+ IH +++ F+ ++ +
Sbjct: 323 ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYV 382
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK G AR + + ++++D++SW +IA Y H +EAL F M +
Sbjct: 383 SGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ AS +SA + + +G+ + VS Y + + +V+L AR G +EA
Sbjct: 443 WPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI--WNALVNLYARCGRSKEA 500
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ +++ + + W ++SG
Sbjct: 501 FSLFEAIEHKDKI-TWNGMVSG 521
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 222/453 (49%), Gaps = 6/453 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEE 97
R + N + + E P ++L L+ +++ S F AL+ C S+ +
Sbjct: 4 RAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPV 63
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I KA+ G G D G+ +++LY K G + A FE++ +D V W +M++G NG
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EAV Y +M G+ V+ ++ AC G VH ++ + V +
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ +Y + G L LA VF M + VT+ LIS AQ G S LE+ EM+ G+ PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V++ S L ACA IG L GK +H Y ++ + ++ S++D+Y KCGV A +F
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ WN+++ +YG ++ LF QM+ V+P+ T+ LL +++G +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G L+ K + ++D+ ++ G +++A +I++ + + + W ++++G
Sbjct: 364 GEQ-IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKD-VVSWTSMIAGY 421
Query: 457 HNHKKFSIGEKVAK--KVLKLNPDDLGIHALVS 487
H+ + K ++ + PD++G+ + +S
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAIS 454
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 297/541 (54%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y K A LF E+P R V T+ ++I+ ++ + ++++M++ +V+P+
Sbjct: 49 LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV-KCGKMNEAMVAF 134
+ T + LKAC + L G A + G V+V +++L++Y C M++A+ F
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ K V W+++I G G + A+++M E + + +ACA +
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H + L+ D V S++DMY + +L A F ++ N++TW LI+G+
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE 288
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++ + +L L +M S G++P+ + S ACA + L G+ +HG VRR FD N+
Sbjct: 289 RSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L S+IDMY+KCG S + LF M RDL+SW ++ YG HG+G+EA+ LF +M+++
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSG 407
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD F +L SH+GLV++G +F M+ Y I P ++ Y C+VDLL RAG VEEA
Sbjct: 408 IQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEA 467
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++V++M EP +VW ALL C +K ++G A++VL P+ G + L+S +A E
Sbjct: 468 FQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAE 527
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW E A +RK M+ KK G S +E+ E+++F++ K E + V+ L M
Sbjct: 528 GKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHM 587
Query: 554 R 554
+
Sbjct: 588 K 588
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 160/361 (44%), Gaps = 31/361 (8%)
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
++++ Y G EA F ++ +D+V W++MI G +A + M + +
Sbjct: 46 ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT-GHLDLAS 232
+ M +++AC + G H + + ++ V VQ +L+DMYA + +D A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF ++ V+W LI+GF G S L +M P+S S A ACA I
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
GK IH + + + S++DMY +C A+ F ++ ++LI+WN +IA
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYW 400
Y E+LSLF QM KP+ TF S+ +A + H G+V G
Sbjct: 286 GYE-RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRG--- 341
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG--LAVWVALLSGCHN 458
FD V+ ++D+ A+ G + ++ K+ M PG L W ++ G
Sbjct: 342 FDKNVALIN---------SLIDMYAKCGSISDSHKLFCDM---PGRDLVSWTTMMIGYGA 389
Query: 459 H 459
H
Sbjct: 390 H 390
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
V T++I Y G+ A LF+++ RD+++W +I + H +A ++F +M+ +
Sbjct: 44 VWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA-GEVE 431
V+P+ T +S+L A + G L +K+ I + ++D+ A + ++
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSL-ATKHGIDRSVYVQNALLDMYAASCATMD 162
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
+AL + + + + ++ W L++G
Sbjct: 163 DALSVFNDIPLKTAVS-WTTLIAG 185
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I +Y I + KLF ++P R + ++ +++I Y E + L+++M++ +
Sbjct: 349 INSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGI 408
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+PD F L C + G + +R +E D + +++L + G++ EA
Sbjct: 409 QPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAF 468
Query: 132 VAFEKMQ-RKDLVCWSSMI 149
E M D W +++
Sbjct: 469 QLVENMPFEPDESVWGALL 487
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 295/555 (53%), Gaps = 34/555 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +FE + + +N++ ++ P L LY MI + P+S TF LK+C
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR--------- 139
L K G +I ++LGY D++V +S++++YV+ ++ +A F++
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 140 ----------------------KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
KD+V W++MI+G V G +EA++ +K M K + DE
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
M+ +I A A G G VH + ++K+ +L+D Y+K G ++ A +F
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+S ++++W LI G+ L L L EM G P+ V+++S L ACA +G + +G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315
Query: 298 KSIHGYTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+ IH Y +R L TS+IDMYSKCG A +F+ M + L +WN +I +
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG A +F +M + +KPD TF LLSA SH+G+++ GR+ F M YKI P
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKL 435
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY CM+DLL +G +EA +++ +M+ EP +W +LL C H +GEK A+ + K
Sbjct: 436 EHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK 495
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+ P++ G + L+SN +A +W EVA +R + GMKKVPG S +E++ +H FI+ DK
Sbjct: 496 IEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 555
Query: 535 SHNQYEDIVYVLKKL 549
H + +I +L+++
Sbjct: 556 FHPRNREIYGMLEEM 570
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 208/430 (48%), Gaps = 50/430 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y + I SAR +F+E+P++ V ++N++I Y + E L L+ +M+K +VRPD
Sbjct: 135 LVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPD 194
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST + A +++G ++ + G+G+++ + +++++ Y KCG+M A F
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD++ W+ +I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 255 GLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI 314
Query: 196 GLSVHGYSIRRHLNLD--VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y +R + ++TSL+DMY+K G ++ A VF +M ++ W A+I GF
Sbjct: 315 GRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF 374
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-----HGYTVRRF 308
A +G A + ++ M+ +PD ++ V L AC+ G L LG+ I H Y +
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI--- 431
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
T ++ Y + D ++ G+ EE
Sbjct: 432 -------TPKLEHYG---------CMID------------LLGHSGLFKEAEE------- 456
Query: 369 MIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLAR 426
MI TM ++PD + SLL A G VE G + + +KI+P Y + ++ A
Sbjct: 457 MISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL---FKIEPNNPGSYVLLSNIYAT 513
Query: 427 AGEVEEALKI 436
AG E +I
Sbjct: 514 AGRWNEVARI 523
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 40/263 (15%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L A VF+ + N++ W + G A + S L+L + M S G P+S + L +
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM------------------------- 321
CA++ K G IHG+ ++ ++ +L + TS+I M
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 322 ------YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
Y+ G AR +FD++ +D++SWN +I+ Y G+ +EAL LF +M++T V+
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 376 PDHSTFASLLSALSHSGLVEEGRY---WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD ST +++SA + SG +E GR W ++ + K ++D ++ GE+E
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSW----IADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + +S + ++ W L+ G
Sbjct: 249 ACGLFLGLSYKDVIS-WNILIGG 270
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 317/563 (56%), Gaps = 13/563 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR LF++ ++ V T+NS+I Y+ E LG++ M VR
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+F +K C +L +L+ E++ V+ G+ D + ++++ Y KC M +A+ F+
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 136 KMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ ++V W++MI+G + N EAVD + MK++G+ +E ++ A + S
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE 414
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
VH ++ + V T+L+D Y K G ++ A+ VF + +IV W A+++G+A
Sbjct: 415 ----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVR-RFDFNL 312
Q G + +++ E+ G +P+ + S L CA + GK HG+ ++ R D +L
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++ MY+K G A +F + + +DL+SWN +I+ Y HG +AL +F +M +
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK D TF + +A +H+GLVEEG +FD+MV KI PT++H +CMVDL +RAG++E+
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+K++++M G +W +L+ C HKK +G A+K++ + P+D + L+SN +A
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W+E A VRK M + +KK PGYS +EV + ++F+ D+SH + I L+ L
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 553 MRAI------SSWLQGHMEEHEE 569
++ + S LQ +EH+E
Sbjct: 771 LKDLGYEPDTSYVLQDIDDEHKE 793
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 226/459 (49%), Gaps = 11/459 (2%)
Query: 2 IKTNLSAYGNSVGRI-IALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
K Y N V ++ I +G + + +A LF++ P R ++Y S++ +SR
Sbjct: 16 FKPKFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQ 75
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L+ + + + D S F+ LK +L D G ++ + ++ G+ +DV VG+S++
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV 135
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+ Y+K + F++M+ +++V W+++I+G N E + + RM+ EG +
Sbjct: 136 DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSF 195
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ A+ G GL VH ++ L+ + V SL+++Y K G++ A +F
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++VTW ++ISG+A NGL L + M+ S S + CA + L+ +
Sbjct: 256 EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTE 315
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIH 356
+H V+ F F+ + T+++ YSKC A LF ++ +++SW +I+ + +
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
EEA+ LF +M V+P+ T++ +L+AL ++ ++ + Y+ T
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG- 431
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D + G+VEEA K+ + + + W A+L+G
Sbjct: 432 -TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KTN ++ Y + A K+F + + + +++++ Y++
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ ++ ++ K ++P+ TF+ L C + + G++ A++ + + V S++L
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G + A F++ + KDLV W+SMI+G +GQ +A+D +K MKK + D V
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS-LVDMYAKTGHLDLASHVFKNM 238
+G+ AC G G +R K S +VD+Y++ G L+ A V +NM
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/590 (33%), Positives = 327/590 (55%), Gaps = 30/590 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRK---E 55
+ + L+A S ++ YG A ++F+E+P VD ++ ++I AYS +
Sbjct: 78 LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA-------VELGYG 108
F G M D V+L A VS + G R+ V+ G+G
Sbjct: 138 EAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+G+SM+++Y C + A F ++++D+V W+S+I+G NG+ A+ ++
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFE 257
Query: 167 RMKKEG---IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL----DVKVQTSLV 219
M EG ++ + V ++ L+++CA+LG VH Y RH +L DV V T+L+
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALL 317
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL----LMEMQSCGFE 275
DM+A+ G+L LA +F + N+V W A+I+G+ Q L L LME G E
Sbjct: 318 DMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVE 377
Query: 276 --PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
P++V+LVS + AC+++G + IH Y V D + + +++IDM +KCG R
Sbjct: 378 VKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGR 437
Query: 333 ALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+F +M +R ++SW+ +I + GIHG G+ AL LF +M +P+ T+ S+LSA SH
Sbjct: 438 QVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSH 497
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GLVE+G+ F+ M Y + PT KHYAC+VDLL RAG ++EA ++ +M + LA+W
Sbjct: 498 AGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWG 557
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
+LL+ CH H +GE V KK+L L+ + +G H L++N + +W++V +R +R+SG
Sbjct: 558 SLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSG 617
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWL 560
++K+PG S +E+ E+++F+ ED+SH + E I L L +R + ++
Sbjct: 618 LRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYV 667
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 223/459 (48%), Gaps = 41/459 (8%)
Query: 42 DTYN-SIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
DT++ + +IA + ++P L + +M V ++ TF LKAC +L L ++
Sbjct: 17 DTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHA 76
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK--DLVCWSSMINGLVFNGQP 158
LG D F +++++ Y KCG A F++M D+V W+++I+ NG
Sbjct: 77 YLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCV 136
Query: 159 REAVDAYKRMK-------KEGIDADEVVMMGLIQACA-DLGDS--RFGLSVHGYSIRRHL 208
EA A+ RM+ E D V + L+ ACA G + R G +VHG ++
Sbjct: 137 DEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGF 196
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELL 266
+ + S+V MY+ + A VF + + ++V+W +LISGF NG A L
Sbjct: 197 GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTF 256
Query: 267 MEMQSCG---FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-----NLVLGTSV 318
+M S G EP+ V++++ L +CA++G ++ +H Y R ++V+ T++
Sbjct: 257 EDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTAL 316
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ------MIET 372
+DM+++CG + AR +FD ++ ++++ W+ +IA Y EEAL LF Q M+
Sbjct: 317 LDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGV 376
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI----QPTEKHYACMVDLLARAG 428
VKP+ T S+++A S G M+ KY + + + ++D+ A+ G
Sbjct: 377 EVKPNAVTLVSVIAACSRLGASRSAS-----MIHKYAVATGLDQDARIASALIDMCAKCG 431
Query: 429 EVEEALKIVDSMSTEPGLAV-WVALLS--GCHNHKKFSI 464
++E ++ M V W +++ G H K ++
Sbjct: 432 DIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRAL 470
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 163/343 (47%), Gaps = 29/343 (8%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ KD W+S+I P+ A+ + RM+ + ++ L++ACA L
Sbjct: 13 ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR--INIVTWGALISGFA 254
L VH Y R L D +LVD Y K GH A+ VF M +++V+W ALIS ++
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 255 QNGLAGSTLELLMEM---------QSCGFEPDSVSLVSALLACAQIG----FLKLGKSIH 301
NG M + CG D VSL + + ACA +G L+ G ++H
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGV--DVVSLGALVSACA-VGCGSNCLRRGSAVH 188
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD--QMQSRDLISWNVIIASYGIHGH 358
G V+ F + LG S++ MYS C A +F+ ++ RD++SWN +I+ + ++G
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGE 248
Query: 359 GEEALSLFLQMIE---TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
E AL F M+ + V+P+ T +LL + + G VE + + + S++ K
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308
Query: 416 H---YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ AR G + A +I D + + + W A+++G
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGK-NVVCWSAMIAG 350
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 297/541 (54%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y K A LF E+P R V T+ ++I+ ++ + ++++M++ +V+P+
Sbjct: 49 LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV-KCGKMNEAMVAF 134
+ T + LKAC + L G A + G V+V +++L++Y C M++A+ F
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ K V W+++I G G + A+++M E + + +ACA +
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H + L+ D V S++DMY + +L A F ++ N++TW LI+G+
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE 288
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++ + +L L +M S G++P+ + S ACA + L G+ +HG VRR FD N+
Sbjct: 289 RSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L S+IDMY+KCG S + LF M RDL+SW ++ YG HG+G+EA+ LF +M+++
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSG 407
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD F +L SH+GLV++G +F M+ Y I P ++ Y C+VDLL RAG VEEA
Sbjct: 408 IQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEA 467
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++V++M EP +VW ALL C +K ++G A++VL P+ G + L+S +A E
Sbjct: 468 FQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAE 527
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW E A +RK M+ KK G S +E+ E+++F++ K E + V+ L M
Sbjct: 528 GKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHM 587
Query: 554 R 554
+
Sbjct: 588 K 588
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 160/361 (44%), Gaps = 31/361 (8%)
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
++++ Y G EA F ++ +D+V W++MI G +A + M + +
Sbjct: 46 ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT-GHLDLAS 232
+ M +++AC + G H + + ++ V VQ +L+DMYA + +D A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF ++ V+W LI+GF G S L +M P+S S A ACA I
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
GK IH + + + S++DMY +C A+ F ++ ++LI+WN +IA
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYW 400
Y E+LSLF QM KP+ TF S+ +A + H G+V G
Sbjct: 286 GYE-RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRG--- 341
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG--LAVWVALLSGCHN 458
FD V+ ++D+ A+ G + ++ K+ M PG L W ++ G
Sbjct: 342 FDKNVALIN---------SLIDMYAKCGSISDSHKLFCDM---PGRDLVSWTTMMIGYGA 389
Query: 459 H 459
H
Sbjct: 390 H 390
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
V T++I Y G+ A LF+++ RD+++W +I + H +A ++F +M+ +
Sbjct: 44 VWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA-GEVE 431
V+P+ T +S+L A + G L +K+ I + ++D+ A + ++
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSL-ATKHGIDRSVYVQNALLDMYAASCATMD 162
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
+AL + + + + ++ W L++G
Sbjct: 163 DALSVFNDIPLKTAVS-WTTLIAG 185
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I +Y I + KLF ++P R + ++ +++I Y E + L+++M++ +
Sbjct: 349 INSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGI 408
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+PD F L C + G + +R +E D + +++L + G++ EA
Sbjct: 409 QPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAF 468
Query: 132 VAFEKMQ-RKDLVCWSSMI 149
E M D W +++
Sbjct: 469 QLVENMPFEPDESVWGALL 487
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 314/602 (52%), Gaps = 61/602 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMI---- 68
++A+Y + A +F+E+ RG+D ++NSI+ A+ + + + L L+++M
Sbjct: 158 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVH 217
Query: 69 --KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ R D + L AC SL + +E+ A+ G DVFVG+++++ Y KCG
Sbjct: 218 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGL 277
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV------- 179
M A+ F M+ KD+V W++M+ G +G + A + +K M+KE I D V
Sbjct: 278 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 337
Query: 180 ----------------------------MMGLIQACADLGDSRFGLSVHGYSIRRHL--- 208
++ ++ ACA LG G+ +H YS++ L
Sbjct: 338 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 397
Query: 209 -------NLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLA 259
+ D+ V +L+DMY+K A +F + + N+VTW +I G AQ G +
Sbjct: 398 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 457
Query: 260 GSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---LVL 314
L+L +EM + G P++ ++ L+ACA + +++GK IH Y +R ++ +
Sbjct: 458 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFV 517
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+I+MYSKCG AR +FD M + ISW ++ YG+HG G EAL +F +M +
Sbjct: 518 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 577
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +L A SH G+V++G +FD M + Y + P +HYA +DLLAR G +++A
Sbjct: 578 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAW 637
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K V M EP VWVALLS C H + E K++++N ++ G + L+SN +A
Sbjct: 638 KTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 697
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++VA +R M+KSG+KK PG S V+ +F + D+SH I +L+ L ++
Sbjct: 698 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 757
Query: 555 AI 556
A+
Sbjct: 758 AM 759
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 234/477 (49%), Gaps = 63/477 (13%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+M++ R D T LKAC L + G G+ ++VF+ ++++ +Y +CG
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166
Query: 126 KMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRM------KKEGIDAD 176
+ EA + F+++ ++ D++ W+S+++ V + A+D + +M K +D
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------------ 224
+ ++ ++ AC L VHG +IR LDV V +L+D YAK
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286
Query: 225 -------------------TGHLDLASHVFKNMSRINI----VTWGALISGFAQNGLAGS 261
+G+ A +FKNM + NI VTW A+I+G++Q G +
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-----------DF 310
L + +M G P+ V+++S L ACA +G G IH Y+++ D
Sbjct: 347 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 406
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+L++ ++IDMYSKC AR++FD ++ R++++W V+I + +G +AL LF++
Sbjct: 407 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 466
Query: 369 MIETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLA 425
MI V P+ T + +L A +H + G+ ++ ++ + A C++++ +
Sbjct: 467 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 526
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
+ G+V+ A + DSMS + ++ W ++++G H + S + K+ K PDD+
Sbjct: 527 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 582
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 155/303 (51%), Gaps = 10/303 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+G+ ++ Y+ CG + A++ E++ V W+ +I + G+ A++ RM + G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
D + +++AC +L R G + HG +V + +LV MY++ G L+ AS
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 233 HVFKNMSRI---NIVTWGALISGFAQNGLAGSTLELLMEM------QSCGFEPDSVSLVS 283
+F +++ ++++W +++S ++ A + L+L +M + D +S+V+
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC + + K +HG +R F ++ +G ++ID Y+KCG+ A +F+ M+ +D
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SWN ++A Y G+ + A LF M + + D T+ ++++ S G E F
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 403 LMV 405
M+
Sbjct: 353 QMI 355
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 292/498 (58%), Gaps = 15/498 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR +FE + V +NS+I YS +P + L Y +M+++ PD TF LKAC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D++ G + V+ G+ +++V + +L++Y+ CG++N + FE + + ++V W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G V N + +A++A++ M+ G+ A+E +M+ L+ AC D F + +
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYF---------QSKV 230
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V + TSL+DMYAK G L A ++F M +V+W ++I+G++QNG A L + ++
Sbjct: 231 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLD 290
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M G PD V+ +S + A G +LG+SIH Y + F + + ++++MY+K G
Sbjct: 291 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 350
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLS 386
A+ F+ ++ +D I+W V+I HGHG EALS+F +M E PD T+ +L
Sbjct: 351 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 410
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SH GLVEEG+ +F M + ++PT +HY CMVD+L+RAG EEA ++V +M +P +
Sbjct: 411 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNV 470
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL--GIHALVSNFFAMEQKWEEVAGVRK 504
+W ALL+GC H+ + +++ V + P++L GI+ L+SN +A +W +V +R+
Sbjct: 471 NIWGALLNGCDIHENLELTDRIRSMVAE--PEELGSGIYVLLSNIYAKAGRWADVKLIRE 528
Query: 505 TMRKSGMKKVPGYSVVEV 522
+M+ + KV G+S VE
Sbjct: 529 SMKSKRVDKVLGHSSVET 546
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 207/411 (50%), Gaps = 22/411 (5%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+K+ +P S L+ C SL++L + K+ + +V S +++ C +
Sbjct: 1 MMKKHYKPILSQ----LENCRSLVELNQLHGLMIKSSVI---RNVIPLSRLIDFCTTCPE 53
Query: 127 ---MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
++ A FE + + W+SMI G + P +A+ Y+ M ++G D +
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
++AC+ L D +FG VHG+ ++ +++ V T L+ MY G ++ VF+++ + N+
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNV 173
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
V WG+LISGF N +E EMQS G + + +V L+AC G+ Y
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC--------GRCFDPY 225
Query: 304 TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
+ FN++L TS+IDMY+KCG AR LFD M R L+SWN II Y +G EEAL
Sbjct: 226 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 285
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+FL M++ + PD TF S++ A G + G+ VSK +V++
Sbjct: 286 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS-IHAYVSKTGFVKDAAIVCALVNM 344
Query: 424 LARAGEVEEALKIVDSMSTEPGLA---VWVALLSGCHNHKKFSIGEKVAKK 471
A+ G+ E A K + + + +A V + L S H ++ SI +++ +K
Sbjct: 345 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 395
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ +AR LF+ +P R + ++NSII YS+ E L ++ M+ + PD
Sbjct: 240 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 299
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF ++A + ++G+ I + G+ D + +++N+Y K G A AFE
Sbjct: 300 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 359
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+++KD + W+ +I GL +G EA+ ++RM+++G D + +G++ AC+ +G
Sbjct: 360 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 419
Query: 195 FGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
G H L V+ +VD+ ++ G + A + K M + N+ WGAL++G
Sbjct: 420 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 479
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSV 279
+ LEL ++S EP+ +
Sbjct: 480 CDIH----ENLELTDRIRSMVAEPEEL 502
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 303/574 (52%), Gaps = 42/574 (7%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y + + A ++F+ +P R V ++N +I A S+ E L + M + VRPDS+T+
Sbjct: 235 YAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTY 294
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
T +L AC L L+ G+++ + + D +V S+M+ LY KCG EA F ++
Sbjct: 295 TSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRD 354
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++ V W+ +I G + G E+V+ + +M+ E + D+ + LI C + D G +
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H ++ V V SL+ MYAK G+L A +F M+ +IV+W +I+ ++Q G
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 260 GSTLELLMEMQS---------------CGFE-----------------PDSVSLVSALLA 287
E +M + G E PD V+ V+
Sbjct: 475 AKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534
Query: 288 CAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVID----MYSKCGVPSCARALFDQMQSRDL 343
CA IG KLG I G+TV+ L+L TSV++ MYSKCG S AR FD + +DL
Sbjct: 535 CADIGANKLGDQIIGHTVK---VGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDL 591
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SWN +I Y HG G++A+ +F ++ KPD+ ++ ++LS SHSGLVEEG+++FD+
Sbjct: 592 VSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDM 651
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
M + I P +H++CMVDLL RAG + EA ++D M +P VW ALLS C H
Sbjct: 652 MKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNND 711
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+ E AK + L+ G + L++ +A K ++ A VRK MR G+KK PGYS +EVN
Sbjct: 712 LAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVN 771
Query: 524 GELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAIS 557
+H F ED SH Q ++ + +KL M I+
Sbjct: 772 NRVHVFKAEDVSHPQ---VIAIREKLDELMEKIA 802
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 222/505 (43%), Gaps = 67/505 (13%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y + A +LF +P R V ++N+I+ Y + L ++ M + D P++ T
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFT 161
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM----------- 127
F +K+C +L ++ ++ + +D V ++++++ V+CG M
Sbjct: 162 FGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIK 221
Query: 128 --------------------NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
+ A+ F+ M +D+V W+ +I+ L +G+ REA+D
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M +G+ D + ACA L +G +H IR ++D V +++V++YAK G
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A VF ++ N V+W LI GF Q G ++EL +M++ D +L + +
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401
Query: 288 CAQIGFLKLGKSIHGYTVRR----------------------------FDF----NLVLG 315
C + LG +H ++ F+F ++V
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
T +I YS+ G + AR FD M +R++I+WN ++ +Y HG E+ L ++ M+ E V
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T+ +L + G + G V I T A ++ + ++ G + EA
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNA-VITMYSKCGRISEAR 580
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K D +S + L W A+++G H
Sbjct: 581 KAFDFLSRKD-LVSWNAMITGYSQH 604
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 183/384 (47%), Gaps = 39/384 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY A+++F L R ++ +I + + E + L+NQM E + D
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVD 391
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ C + MD+ +G ++ ++ G+ V V +S++++Y KCG + A + F
Sbjct: 392 QFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFN 451
Query: 136 KMQRKDLVCWSSMI----------------------NGLVFN---------GQPREAVDA 164
M +D+V W+ MI N + +N G + +
Sbjct: 452 FMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKM 511
Query: 165 YKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y M E + D V + L + CAD+G ++ G + G++++ L LD V +++ MY+
Sbjct: 512 YSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYS 571
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G + A F +SR ++V+W A+I+G++Q+G+ +E+ ++ + G +PD +S V+
Sbjct: 572 KCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVA 631
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ 339
L C+ G ++ GK + + + D N+ G + ++D+ + G A+ L D+M
Sbjct: 632 VLSGCSHSGLVEEGKFY--FDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMP 689
Query: 340 SRDLIS-WNVIIASYGIHGHGEEA 362
+ W ++++ HG+ + A
Sbjct: 690 MKPTAEVWGALLSACKTHGNNDLA 713
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + M+N Y K G +++A+ F +M +D+ W+++++G +GQ A+D + M+
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 170 KEGIDADEVVMMGLI-QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G G + ++C LG L + G + D VQT+LVDM + G +
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210
Query: 229 DLAS-------------------------------HVFKNMSRINIVTWGALISGFAQNG 257
D AS +FK+M ++V+W +IS +++G
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGT 316
L+++++M G PDS + S+L ACA++ L+ GK +H +R + + +
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++++Y+KCG A+ +F ++ R+ +SW V+I + +G E++ LF QM ++
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+L+S ++ + G L + + + ++ + A+ G ++ A I
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS-LISMYAKCGNLQNAELI 449
Query: 437 VDSMSTEPGLAVWVALLSG 455
+ M+ E + W +++
Sbjct: 450 FNFMA-ERDIVSWTGMITA 467
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 141/268 (52%), Gaps = 14/268 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
+I Y +I AR+ F+++ R V T+N+++ AY + + + L +Y+ M+ E DV P
Sbjct: 464 MITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIP 523
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T+ + C + K+G++I V++G D V ++++ +Y KCG+++EA AF
Sbjct: 524 DWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAF 583
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG--- 191
+ + RKDLV W++MI G +G ++A++ + + +G D + + ++ C+ G
Sbjct: 584 DFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVE 643
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
+ +F + ++R N+ ++ + +VD+ + GHL A ++ M + WGA
Sbjct: 644 EGKFYFDM----MKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGA 699
Query: 249 LISG---FAQNGLAGSTLELLMEMQSCG 273
L+S N LA + L ++ S G
Sbjct: 700 LLSACKTHGNNDLAELAAKHLFDLDSPG 727
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L + V +I +Y I ARK F+ L + + ++N++I YS+ + +
Sbjct: 552 VKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAI 611
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE---EIWRKAVELGYGNDVFVGSSML 118
+++ ++ + +PD ++ L C ++ G+ ++ ++ + G + F S M+
Sbjct: 612 EIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHF--SCMV 669
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLV-CWSSMINGLVFNGQ 157
+L + G + EA ++M K W ++++ +G
Sbjct: 670 DLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGN 709
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 315/563 (55%), Gaps = 13/563 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR LF++ ++ V T+NS+I Y+ E LG++ M VR
Sbjct: 239 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLS 298
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+F +K C +L +L+ E++ V+ G+ D + ++++ Y KC M +A+ F+
Sbjct: 299 ESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFK 358
Query: 136 KMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ ++V W++MI+G + N EAV + MK++G+ +E ++ A + S
Sbjct: 359 ETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE 418
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
VH ++ + V T+L+D Y K G +D A+ VF + +IV W A+++G+A
Sbjct: 419 ----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYA 474
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA-QIGFLKLGKSIHGYTVR-RFDFNL 312
Q G + +++ E+ G +P+ + S L CA + GK HG+ ++ R D +L
Sbjct: 475 QAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSL 534
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++ MY+K G A +F + + +DL+SWN +I+ Y HG +AL +F +M +
Sbjct: 535 CVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 594
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK D TF + +A +H+GLVEEG +FD+MV KI PT++H +CMVDL +RAG++E+
Sbjct: 595 KVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 654
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+K++D+M G +W +L+ C HKK +G A+K++ + P+D + L+SN +A
Sbjct: 655 AMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAE 714
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W+E A VRK M + +KK PGYS +EV + +AF+ D+SH + I L+ L
Sbjct: 715 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTR 774
Query: 553 MRAI------SSWLQGHMEEHEE 569
++ + S LQ +EH+E
Sbjct: 775 LKDLGYEPDTSYVLQDIDDEHKE 797
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 223/463 (48%), Gaps = 15/463 (3%)
Query: 2 IKTNLSAYGNSVGRI-----IALYGGKND--IVSARKLFEELPLRGVDTYNSIIIAYSRK 54
K Y N +G + I +G + + A LF++ P R ++Y S++ +SR
Sbjct: 16 FKLKFCIYANELGNLKPNFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRD 75
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
E L+ + + D S F+ LK +L D G ++ + ++ G+ +DV VG
Sbjct: 76 GRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 135
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+S+++ Y+K + F++M+ +++V W+++I+G N E + + RM+ EG
Sbjct: 136 TSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQ 195
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ + A+ G GL VH ++ L+ + V SL+++Y K G++ A +
Sbjct: 196 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 255
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F ++VTW ++ISG+A NGL L + M+ S S + CA + L
Sbjct: 256 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKEL 315
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
+ + +H V+ F F+ + T+++ YSKC A LF + +++SW +I+
Sbjct: 316 RFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISG 375
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+ + EEA+ LF +M V+P+ T++ +L+AL ++ ++ + Y+
Sbjct: 376 FLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSS 432
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
T ++D + G+V+EA K+ + + + W A+L+G
Sbjct: 433 TVG--TALLDAYVKLGKVDEAAKVFSGIDNKD-IVAWSAMLAG 472
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 12/248 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KTN ++ Y + A K+F + + + +++++ Y++
Sbjct: 423 VVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAA 482
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKAC-VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ +++++ K V+P+ TF+ L C + + G++ A++ + + V S++L
Sbjct: 483 IKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLT 542
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G + A F++ + KDLV W+SMI+G +GQ +A+D +K MKK + D V
Sbjct: 543 MYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVT 602
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV------QTSLVDMYAKTGHLDLASH 233
+G+ AC G G +R D K+ + +VD+Y++ G L+ A
Sbjct: 603 FIGVFAACTHAGLVEEGEKYFDIMVR-----DCKIAPTKEHNSCMVDLYSRAGQLEKAMK 657
Query: 234 VFKNMSRI 241
V NM +
Sbjct: 658 VIDNMPNL 665
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 304/579 (52%), Gaps = 37/579 (6%)
Query: 1 MIKTNLSAYGNSVGRII---ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ ++I L + + A +FE + + +N++ ++ P
Sbjct: 25 MIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 84
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY MI + P+ TF LK+C + G++I ++LGY D++V +S+
Sbjct: 85 VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 144
Query: 118 LNLYVKCGKMNEAMVAFEKMQR-------------------------------KDLVCWS 146
+++YV+ G++ +A F++ KD+V W+
Sbjct: 145 ISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWN 204
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G G +EA++ +K M K + DE M+ ++ ACA G VH +
Sbjct: 205 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH 264
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++K+ +L+D+Y K G ++ A +F+ +S ++++W LI G+ L L L
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG---TSVIDMYS 323
EM G P+ V+++S L ACA +G +++G+ IH Y +R TS+IDMY+
Sbjct: 325 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 384
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A+ +FD + +R L SWN +I + +HG A +F +M + ++PD TF
Sbjct: 385 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 444
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHSG+++ GR+ F M YKI P +HY CM+DLL +G +EA +++++M E
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 504
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C + +GE A+ ++K+ P + G + L+SN +A +W EVA +R
Sbjct: 505 PDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIR 564
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ GMKKVPG S +E++ +H FI+ DK H + +I
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 211/446 (47%), Gaps = 48/446 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN---EAMVAFEKMQR 139
L C +L L+M I + ++ G N + S ++ V + A+ FE +Q
Sbjct: 9 LHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+L+ W++M G + P A+ Y M G+ + L+++CA R G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR------------------- 240
HG+ ++ +LD+ V TSL+ MY + G L+ A VF S
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185
Query: 241 ------------INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
++V+W A+ISG+A+ G LEL EM PD ++VS + AC
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
AQ ++LG+ +H + F NL + ++ID+Y KCG A LF+ + +D+ISWN
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y +EAL LF +M+ + P+ T S+L A +H G +E GR W + ++K
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR-WIHVYINK 364
Query: 408 Y--KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK---- 461
+ H ++D+ A+ G++E A ++ DS+ L+ W A++ G H +
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNR-SLSSWNAMIFGFAMHGRANAA 423
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVS 487
F I ++ K ++ PDD+ L+S
Sbjct: 424 FDIFSRMRKN--EIEPDDITFVGLLS 447
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 314/602 (52%), Gaps = 61/602 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQMI---- 68
++A+Y + A +F+E+ RG+D ++NSI+ A+ + + + L L+++M
Sbjct: 51 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVH 110
Query: 69 --KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ R D + L AC SL + +E+ A+ G DVFVG+++++ Y KCG
Sbjct: 111 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGL 170
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV------- 179
M A+ F M+ KD+V W++M+ G +G + A + +K M+KE I D V
Sbjct: 171 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 230
Query: 180 ----------------------------MMGLIQACADLGDSRFGLSVHGYSIRRHL--- 208
++ ++ ACA LG G+ +H YS++ L
Sbjct: 231 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 290
Query: 209 -------NLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLA 259
+ D+ V +L+DMY+K A +F + + N+VTW +I G AQ G +
Sbjct: 291 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 350
Query: 260 GSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---LVL 314
L+L +EM + G P++ ++ L+ACA + +++GK IH Y +R ++ +
Sbjct: 351 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFV 410
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+I+MYSKCG AR +FD M + ISW ++ YG+HG G EAL +F +M +
Sbjct: 411 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 470
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +L A SH G+V++G +FD M + Y + P +HYA +DLLAR G +++A
Sbjct: 471 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAW 530
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K V M EP VWVALLS C H + E K++++N ++ G + L+SN +A
Sbjct: 531 KTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 590
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++VA +R M+KSG+KK PG S V+ +F + D+SH I +L+ L ++
Sbjct: 591 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 650
Query: 555 AI 556
A+
Sbjct: 651 AM 652
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 233/476 (48%), Gaps = 63/476 (13%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ R D T LKAC L + G G+ ++VF+ ++++ +Y +CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 127 MNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRM------KKEGIDADE 177
+ EA + F+++ ++ D++ W+S+++ V + A+D + +M K +D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------------- 224
+ ++ ++ AC L VHG +IR LDV V +L+D YAK
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 225 ------------------TGHLDLASHVFKNMSRINI----VTWGALISGFAQNGLAGST 262
+G+ A +FKNM + NI VTW A+I+G++Q G +
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-----------DFN 311
L + +M G P+ V+++S L ACA +G G IH Y+++ D +
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L++ ++IDMYSKC AR++FD ++ R++++W V+I + +G +AL LF++M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 370 IETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLAR 426
I V P+ T + +L A +H + G+ ++ ++ + A C++++ ++
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
G+V+ A + DSMS + ++ W ++++G H + S + K+ K PDD+
Sbjct: 421 CGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 475
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 323/648 (49%), Gaps = 86/648 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I Y ++ AR++F E PL DT YN++I YS + L+ M + +
Sbjct: 85 LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQ 144
Query: 74 PDSSTFTVALKACVSLM-DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK------ 126
PD TF L A + D + ++ V+ G V +++L++YVKC
Sbjct: 145 PDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSS 204
Query: 127 ---MNEAMVAFEKMQRKDLVCWSSMINGLVFNG--------------QP----------- 158
M A F++M +++ W+++I G V NG QP
Sbjct: 205 SSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGY 264
Query: 159 ------REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD- 211
+A+ +++M+ G+ DE +I ACAD G G VH Y ++ LN D
Sbjct: 265 LHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDR 324
Query: 212 ---VKVQTSLVDMYAKTGHLDLASHVF-------------------------------KN 237
+ V +L+ +Y K G +D A +F
Sbjct: 325 DFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQ 384
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M N++TW +ISG AQNG L+L +M+ G+EP+ + A+ AC+ +G L+ G
Sbjct: 385 MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG 444
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +H V D L +G ++I MY++CG+ AR +F M D +SWN +IA+ G H
Sbjct: 445 RQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQH 504
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
GHG +A+ L+ QM++ + PD TF ++LSA SH+GLVEEG +F+ M+ Y I P E H
Sbjct: 505 GHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDH 564
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YA M+DL RAG+ +A ++DSM E +W ALL+GC H +G + A+K+ KL
Sbjct: 565 YARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLI 624
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P G + L+SN +A +W +VA RK MR G+KK P S EV ++H F+++D H
Sbjct: 625 PQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVH 684
Query: 537 NQYEDIVYVLKKLYLEMRAI-----SSWLQGHME-EHEEHDPLSTAAQ 578
+ I L+KL LEM+ I + ++ ME EH+E+ LST ++
Sbjct: 685 PEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEY-ALSTHSE 731
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 201/453 (44%), Gaps = 61/453 (13%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I + G+ V R+I +Y +D V ARKLF+E+P V ++I AYS
Sbjct: 39 VIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYS-------- 90
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+L +LKM EI+ + L + VF ++M+
Sbjct: 91 ---------------------------ALGNLKMAREIFNE-TPLDMRDTVFY-NAMITG 121
Query: 121 YVKCGKMNEAMVAFEKMQ----RKDLVCWSSMING--LVFNGQPREAVDAYKRMKKEGID 174
Y + A+ F M+ + D ++S+++ L+F + R+ + + K GI+
Sbjct: 122 YSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDE-RQCGQMHGTVVKFGIE 180
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVK-----VQTSLVDMYAKTGHLD 229
V+ L+ S S + R L ++ + T+L+ Y + G L
Sbjct: 181 IFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLT 240
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A + M+ + W A+ISG+ +GL L L +M+ G + D + S + ACA
Sbjct: 241 GAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACA 300
Query: 290 QIGFLKLGKSIHGYTVRR-----FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
GF LGK +H Y ++ DF L +G ++I +Y K G AR +F +M +D+I
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDII 360
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
+WN +++ Y G EEA S F QM E + T+ ++S L+ +G E+ F+ M
Sbjct: 361 TWNTLLSGYVNAGRMEEAKSFFAQMPEKNLL----TWTVMISGLAQNGFGEQALKLFNQM 416
Query: 405 -VSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ Y +P + +A + + G +E ++
Sbjct: 417 KLDGY--EPNDYAFAGAITACSVLGALENGRQL 447
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 285/489 (58%), Gaps = 7/489 (1%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P TF + +C L G ++ R V+ G+ D F+ + ++N+Y + G ++ A+
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA----D 189
F++ + + + W+++ L G +E +D Y +M G +D +++AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ R G +H + +R ++ V T+L+D+YAK G + A+ VF M N V+W A+
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 250 ISGFAQNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
I+ FA+N + LEL LM ++C P+SV++V+ L ACA + L+ GK IHGY +RR
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
D L + ++I MY +CG + +FD M+ RD++SWN +I+ YG+HG G++A+ +F
Sbjct: 316 QLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
MI V P + +F ++L A SH+GLVEEG+ F+ M+SKY+I P +HYACMVDLL R
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
A + EA+K+++ M EPG VW +LL C H + E+ + + +L P + G + L+
Sbjct: 436 ANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLL 495
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
++ +A + W E V K + G++K+PG S +EV ++++F+ D+ + Q E+I +L
Sbjct: 496 ADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555
Query: 547 KKLYLEMRA 555
KL EM+A
Sbjct: 556 VKLSNEMKA 564
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 152/290 (52%), Gaps = 6/290 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y I A K+F+E R + +N++ A + E+L LY QM
Sbjct: 118 KLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPS 177
Query: 75 DSSTFTVALKACV----SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV S+ L+ G+EI + GY ++ V +++L++Y K G ++ A
Sbjct: 178 DRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYA 237
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F M K+ V WS+MI N P +A++ ++ M E ++ + V M+ ++QACA
Sbjct: 238 NSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACA 297
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +RR L+ + V +L+ MY + G + + VF NM + ++V+W +
Sbjct: 298 GLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNS 357
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
LIS + +G +++ M G P +S ++ L AC+ G ++ GK
Sbjct: 358 LISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
Q+ G L+ + + C P + + +CAQ L G +H V FD +
Sbjct: 55 QSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPF 114
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L T +I+MY + G A +FD+ + R + WN + + + GHG+E L L++QM
Sbjct: 115 LATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIG 174
Query: 374 VKPDHSTFASLLSALSHSGL----VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
D T+ +L A S L + +G+ + ++ + ++D+ A+ G
Sbjct: 175 TPSDRFTYTYVLKACVVSELSVCPLRKGKE-IHAHILRHGYEANIHVMTTLLDVYAKFGS 233
Query: 430 VEEALKIVDSMSTEPGLAVWVALLS 454
V A + +M T+ W A+++
Sbjct: 234 VSYANSVFCAMPTK-NFVSWSAMIA 257
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 316/578 (54%), Gaps = 34/578 (5%)
Query: 12 SVGRIIALYGGKN--DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
++G++I+ + D+ A+++F+++P YNS+I YS + P + + L+ +MI
Sbjct: 22 TLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMIC 81
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ P+ T LKAC + A++LG G+ VFV ++++ +YV CG ++
Sbjct: 82 SGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHC 141
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ + K LV W+SMI G G +EA +++M++ G++ D + L+ C+
Sbjct: 142 ARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQ 201
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
D G VH + +D+ V+ +LVDMYAK G+L A +F N+V+W ++
Sbjct: 202 SRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSM 261
Query: 250 ISGFAQNG-----------LAGST--------------------LELLMEMQSCGFEPDS 278
IS +AQ+G + G L+L +M++ PD
Sbjct: 262 ISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDE 321
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+LVS L AC+Q+G L +GK IH Y + + + + L S+IDMY+KCG A +F +
Sbjct: 322 ATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLE 381
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M ++L+SWNVII + +HG G EA+ LF +M PD T LLSA SHSGLV+ G
Sbjct: 382 MPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 441
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
Y+FD M Y++ +HYACMVDLL R G + EA++++ M +P + VW ALL C
Sbjct: 442 LYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACR 501
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
H IG+++ K++L+L P G++ L+SN + Q+WE+V +RK M G+KK
Sbjct: 502 IHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAI 561
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
S +E++G ++ F+++DK H I +L +L +R+
Sbjct: 562 SSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRS 599
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 311/569 (54%), Gaps = 23/569 (4%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A GN+ ++A Y N A +F+ +P R V ++NS+I + + + L+ +M
Sbjct: 232 AVGNA---LMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRM 288
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
E DS+T L AC L L +G + +V+ G+ + + + +L++Y C
Sbjct: 289 WLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDW 348
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
F M +K++V W++MI G + ++ M EG D + + A
Sbjct: 349 RSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAF 408
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A + G SVHGY+IR + + V +L++MY K G+++ A +F + ++++W
Sbjct: 409 AGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWN 468
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
LI G+++N LA L EM P++V++ L A A + L+ G+ +H Y +RR
Sbjct: 469 TLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRR 527
Query: 308 F----DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
DF + ++IDMY KCG AR LFD++ +++LISW +++A YG+HG G +A+
Sbjct: 528 GYLEDDF---VANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAI 584
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+LF QM + + PD ++F+++L A SHSGL +EG +FD M ++KI+P KHY CMVDL
Sbjct: 585 ALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDL 644
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
L G ++EA + +DSM EP ++WV+LL GC H+ + E+VA++V +L P++ G +
Sbjct: 645 LINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYY 704
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
L++N +A ++WE V ++ + G+++ G S +E G++H FI ++++H Q I
Sbjct: 705 VLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIA 764
Query: 544 YVLKKLYLEMRAISSWLQGHMEEHEEHDP 572
L ++ M + E HDP
Sbjct: 765 EFLNEVAKRM------------QEEGHDP 781
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 257/497 (51%), Gaps = 10/497 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELP-LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ +Y D+ +AR++F+E+P + V + +++ Y++ E + L+ +M VR
Sbjct: 134 KLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVR 193
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T + LK L ++ GE + +LG+G+ VG++++ Y K + +A++
Sbjct: 194 PDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILV 253
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D++ W+SMI+G NG +A++ + RM EG + D ++ ++ ACA+L
Sbjct: 254 FDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLL 313
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VHGYS++ + L+DMY+ + +F+NM + N+V+W A+I+ +
Sbjct: 314 FLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSY 373
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+ GL L EM G PD ++ SAL A A LK GKS+HGY +R + L
Sbjct: 374 TRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVL 433
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++MY KCG A+ +FD + S+D+ISWN +I Y + EA SLF +M+
Sbjct: 434 AVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-L 492
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++P+ T +L A + +E GR + + ++ A ++D+ + G +
Sbjct: 493 QLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANA-LIDMYVKCGALLL 551
Query: 433 ALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV---S 487
A ++ D +S + L W +++ G H + +I +V + PD A++ S
Sbjct: 552 ARRLFDRLSNK-NLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACS 610
Query: 488 NFFAMEQKWEEVAGVRK 504
+ ++ W +RK
Sbjct: 611 HSGLRDEGWRFFDAMRK 627
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 191/390 (48%), Gaps = 15/390 (3%)
Query: 75 DSSTFTVALKACVSLMDLKMGEE--IWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAM 131
D ++ L+ C + L+ G+ +A LG G D +G ++ +Y+KCG + A
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149
Query: 132 VAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M Q D+ W+++++G G RE V +++M G+ D + +++ A L
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G G VHG + V +L+ YAK+ A VF M ++++W ++I
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
SG NGL +EL + M G E DS +L+S L ACA++ L LG+ +HGY+V+ F
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L ++DMYS C +F M ++++SW +I SY G ++ LF +M
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEM 389
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYA---CMVDLLA 425
+PD S L A + + L++ G+ V Y I+ EK A ++++
Sbjct: 390 GLEGTRPDIFAITSALHAFAGNELLKHGKS-----VHGYAIRNGMEKVLAVTNALMEMYV 444
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G +EEA I D + ++ ++ W L+ G
Sbjct: 445 KCGNMEEAKLIFDGVVSKDMIS-WNTLIGG 473
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 1/296 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT + + ++ +Y +D S K+F + + V ++ ++I +Y+R +V
Sbjct: 324 VKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVA 383
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
GL+ +M E RPD T AL A LK G+ + A+ G + V ++++ +Y
Sbjct: 384 GLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMY 443
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
VKCG M EA + F+ + KD++ W+++I G N EA + M + + + V M
Sbjct: 444 VKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMT 502
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ A A L G +H Y++RR D V +L+DMY K G L LA +F +S
Sbjct: 503 CILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNK 562
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
N+++W +++G+ +G + L +M+ G PD+ S + L AC+ G G
Sbjct: 563 NLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEG 618
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVR-----RFDFNLVLGTSVIDMYSKCGVPSCA 331
D S + L C+++ L+ GK H + VR R + VLG ++ MY KCG A
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAH-FLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENA 148
Query: 332 RALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
R +FD+M Q D+ W +++ Y G E + LF +M V+PD T + +L ++
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G +E+G L+ K ++ A++ ++A+ + D M ++ W
Sbjct: 209 LGSIEDGEVVHGLL-EKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVIS-WN 266
Query: 451 ALLSGC 456
+++SGC
Sbjct: 267 SMISGC 272
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 291/535 (54%), Gaps = 9/535 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
+D +R LF ++ V ++N + AYSR P E + LYN M++ PD+ +F L
Sbjct: 75 HDFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVL 134
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR--KD 141
KAC L L G EI ++LG DVFV +++++ + CG + A F+ + +D
Sbjct: 135 KACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRD 194
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVH 200
+V W+SMI+G + + + A+ + + +G + DEV ++ + C LG G +H
Sbjct: 195 VVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIH 254
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G LDV V +SL+DMY+K G ++ A VF + N V W ++I+G+AQ+ L
Sbjct: 255 GLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFK 314
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
+EL EMQ GF D+ ++ L AC G L G+ IH Y R + +L ++I
Sbjct: 315 EAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALI 374
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDH 378
MYSKCG A +F + D+ SW+ +I+ ++G ++AL LF QM + + ++P+
Sbjct: 375 GMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 434
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TF +L A +H G V++G Y+F+ M Y + P +HY CMVDLL RA + EA K +
Sbjct: 435 ITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIR 494
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
++ +P + +W +LL C NH + E AK++ +L P G L+SN +A +W +
Sbjct: 495 TLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGD 554
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKL 549
V VRK M +KK PG S VE++G +H + D+SH + YE ++ + K L
Sbjct: 555 VKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKAL 609
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 305/579 (52%), Gaps = 37/579 (6%)
Query: 1 MIKTNLSAYGNSVGRIIA---LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIKT L ++ ++I L + + A +FE + + +N++ ++ P
Sbjct: 13 MIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDP 72
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L LY MI + P+S TF LK+C K G++I ++LG D++V +S+
Sbjct: 73 VSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 132
Query: 118 LNLYVKCGKMNEAMVAF------------------------EKMQR-------KDLVCWS 146
+++YV+ G++ +A F E Q+ KD+V W+
Sbjct: 133 ISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWN 192
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G G +EA++ +K M K + DE M+ ++ ACA G G VH +
Sbjct: 193 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH 252
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
++K+ +L+D+Y+K G L+ A +F+ + ++++W LI G+ L L L
Sbjct: 253 GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLF 312
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD---FNLVLGTSVIDMYS 323
EM G P+ V+++S L ACA +G + +G+ IH Y +R L TS+IDMY+
Sbjct: 313 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYA 372
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A +F+ + + L SWN +I + +HG + + +F +M + ++PD TF
Sbjct: 373 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVG 432
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
LLSA SHSG+++ GR+ F M YK+ P +HY CM+DLL +G +EA +++++M E
Sbjct: 433 LLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 492
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P +W +LL C H +GE A+ ++K+ P++ G + L+SN +A +W EVA R
Sbjct: 493 PDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTR 552
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ GMKKVPG S +E++ +H FI+ DK H + +I
Sbjct: 553 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 591
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 43/295 (14%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD---LASHVFKNMSRINIVTWGALISGFAQ 255
+H I+ L+ + L++ + H D A VF+ + N++ W + G A
Sbjct: 9 IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ S L+L + M S G P+S + L +CA+ K G+ IHG+ ++ D +L +
Sbjct: 69 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128
Query: 315 GTSVIDM-------------------------------YSKCGVPSCARALFDQMQSRDL 343
TS+I M Y+ G A+ +FD++ +D+
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---W 400
+SWN +I+ Y G+ +EAL LF M++T V+PD ST +++SA + SG +E GR W
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
D + K ++DL ++ GE+E A + + + + ++ W L+ G
Sbjct: 249 ID----DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVIS-WNTLIGG 298
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 295/514 (57%), Gaps = 1/514 (0%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A G + ++ +Y D+ +ARK+F+ +P R V ++ S++ + E L L+N+M
Sbjct: 155 ADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEM 214
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+++V P T L AC L L G I ++ G + F+ +S+L++Y KC K+
Sbjct: 215 RQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKV 274
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+A F++++ D+V W++MI G N +P +A+ + K I + V + +I A
Sbjct: 275 EDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISAS 334
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A L G SVH ++ V+ +LVDMYAK L A+ +F + ++V W
Sbjct: 335 AQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWN 394
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
++++G+++NG+A +L L M+ G PD++S+V+AL AC + L +GK H Y ++
Sbjct: 395 SMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKY 454
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F N+ + T+++++YSKC A+ +F+ M R+ ++W+ +I YG+ G ++ LF
Sbjct: 455 AFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLF 514
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M++ + P+ F S+LSA SH+G+V G+ +FD M + I P+ KHYACMVD++AR
Sbjct: 515 NEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMAR 574
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG +EEAL+ + +M + G++VW + L GC H + GE+ KK+ L+P+ + L+
Sbjct: 575 AGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLM 634
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
SN + +W++ +R+ M++ G+ K+PG S V
Sbjct: 635 SNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSV 668
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 223/444 (50%), Gaps = 6/444 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++ Y D+ SAR + + P Y ++ S + + L+ M +
Sbjct: 60 KLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAA 119
Query: 75 DSS--TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ ++ALKACV D + G + V+ G G D FV +S++++Y K G + A
Sbjct: 120 AQADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARK 178
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ +++V W+SM++G + NG E + + M+++ + E M+ ++ ACA LG
Sbjct: 179 VFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGG 238
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG I+ L+ + + SL+DMYAK ++ A VF + ++IV W A+I G
Sbjct: 239 LHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVG 298
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+ QN L+L + + P+SV++ + + A AQ+ L LG+S+H V+
Sbjct: 299 YTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMES 358
Query: 313 -VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V+ +++DMY+KC A ++F ++ +D+++WN ++A Y +G E+L LF +M
Sbjct: 359 DVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRM 418
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ PD + + LSA + G+ F KY +++L ++ ++
Sbjct: 419 QGISPDAISVVNALSACVCLADLHIGK-GFHTYAIKYAFMSNIYVNTALLNLYSKCADLP 477
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A ++ + M T+ W A++ G
Sbjct: 478 SAQRVFNDM-TDRNSVTWSAMIGG 500
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 183/394 (46%), Gaps = 11/394 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK LS ++ +Y + AR++F+EL + + ++I+ Y++ + P +
Sbjct: 249 VIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDA 308
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ + P+S T + A L L +G + V+LG V ++++++
Sbjct: 309 LQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDM 368
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + EA F ++ KD+V W+SM+ G NG E++ + RM+ +GI D + +
Sbjct: 369 YAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISV 428
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ + AC L D G H Y+I+ ++ V T+L+++Y+K L A VF +M+
Sbjct: 429 VNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTD 488
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N VTW A+I G+ G + +++L EM P+ V S L AC+ G + GK
Sbjct: 489 RNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEY 548
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHG 357
R F+ + ++D+ ++ G A M + IS W + +H
Sbjct: 549 FDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHS 608
Query: 358 H---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
GEEA+ + P+ F L+S L
Sbjct: 609 RLEFGEEAIKKMAAL-----HPETPDFYVLMSNL 637
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 201/617 (32%), Positives = 327/617 (52%), Gaps = 70/617 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD---TYNSIIIAYSRKESPFEVLGLYNQM-IKED 71
+I++YG +V ARK+F+EL RG+ T+NSI+ YS P + L+ +M +
Sbjct: 167 VISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYG 226
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ PD+ L C L G ++ V G DVFVG++++++Y KCGKM +A
Sbjct: 227 ILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDAN 286
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV------------ 179
FE+M+ KD+V W++M+ G NG+ +A+ + +M++E I++D V
Sbjct: 287 KVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRG 346
Query: 180 -----------------------MMGLIQACADLGDSRFGLSVHGYSIRRHL-------N 209
+M L+ ACA +G G H YS++ L
Sbjct: 347 FGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDT 406
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLELLM 267
D+ V +L+DMYAK L++A +F + ++VTW +I G+AQ+G A L+L
Sbjct: 407 DDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFS 466
Query: 268 EM---QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN---LVLGTSVIDM 321
EM +C P+ ++ L+ACA++ LK GK IH Y +RR + L + +IDM
Sbjct: 467 EMFKIDNC-IVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDM 525
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSK G A+ +FD M R+ +SW ++ YG+HG E+A +F +M + + D TF
Sbjct: 526 YSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITF 585
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+L A SHSG+ + + P +HYACMVDLL RAG + EA+++++ M
Sbjct: 586 LVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMP 632
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
EP VW+ALLS C H + E AKK+L+L D+ G + L+SN +A ++W++VA
Sbjct: 633 IEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVAR 692
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQ 561
+ M+++G+KK+PG+S V+ + F + D++H Q + I L L ++A ++
Sbjct: 693 IGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKA--NFSL 750
Query: 562 GHMEEHEEHDPLSTAAQ 578
+++ E+ D LS ++
Sbjct: 751 HDVDDEEKGDQLSEHSE 767
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 259/530 (48%), Gaps = 61/530 (11%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEE--LPLRG-VDTYNSIIIAYSRKESPFEVLG 62
L++Y N V +I Y N I +A L E+ P V +N +I SP L
Sbjct: 54 LNSYTN-VTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALR 112
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +M PD TF KAC + + ++G I + LG+ ++VFV ++++++Y
Sbjct: 113 LFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYG 172
Query: 123 KCGKMNEAMVAFEKMQRK---DLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEV 178
KC + A F+++ + D V W+S+++ P AV ++ M GI D V
Sbjct: 173 KCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTV 232
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ ++ C LG G VHG+ +R L DV V +LVDMYAK G ++ A+ VF+ M
Sbjct: 233 GVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERM 292
Query: 239 SRINIVTWGAL-----------------------------------ISGFAQNGLAGSTL 263
++VTW A+ ISG+AQ G +
Sbjct: 293 RFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAM 352
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--------DFNLVLG 315
++ +M C P+ V+L+S L ACA +G L GK H Y+V+ +L +
Sbjct: 353 DVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVI 412
Query: 316 TSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQM--IE 371
++IDMY+KC ARA+FD++ + RD+++W V+I Y HG AL LF +M I+
Sbjct: 413 NALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKID 472
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEV 430
+ P+ T + +L A + ++ G+ ++ + +I A C++D+ +++G+V
Sbjct: 473 NCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDV 532
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKK----FSIGEKVAKKVLKLN 476
+ A + DSMS ++ W +LL+G H + F + +++ K+ L L+
Sbjct: 533 DTAQVVFDSMSKRNAVS-WTSLLTGYGMHGRSEDAFRVFDEMRKEALVLD 581
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 12/286 (4%)
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNM--SRI 241
Q C L ++ L Y I HL T+L+ Y + + A + KN+ S
Sbjct: 32 QQCKTLTQAK--LLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHS 89
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++ W LI + L L M++ + PD + AC +I +LG SIH
Sbjct: 90 SVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR---DLISWNVIIASYGIHG 357
G +R F+ N+ + +VI MY KC AR +FD++ R D ++WN I++ Y
Sbjct: 150 GCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCF 209
Query: 358 HGEEALSLFLQM-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
A+SLF +M + + PD ++L + GL GR V ++
Sbjct: 210 VPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVG 269
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
A +VD+ A+ G++E+A K+ + M + + W A+++G + +F
Sbjct: 270 NA-LVDMYAKCGKMEDANKVFERMRFK-DVVTWNAMVTGYSQNGRF 313
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 300/544 (55%), Gaps = 9/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-RP 74
+I++Y IV A +F + + + ++ S+I +++ E L L+ M ++ +P
Sbjct: 299 LISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQP 358
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F AC SL++ + G +I + G G +VF G S+ ++Y K G + A+ AF
Sbjct: 359 NEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAF 418
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+++I +G EA+ + +M G+ D + + L+ AC
Sbjct: 419 YQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTIN 478
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGF 253
G +H Y I+ L+ + V SL+ MY K +L A +VFK++S N+V+W A++S
Sbjct: 479 QGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSAC 538
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
Q+ AG L M +PD++++ + L CA++ L++G +H ++V+ LV
Sbjct: 539 LQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKS---GLV 595
Query: 314 LGTSV----IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ SV IDMY+KCG AR +F Q+ D++SW+ +I Y G G EAL+LF M
Sbjct: 596 VDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMM 655
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
V+P+ T+ +LSA SH GLVEEG ++++ M + I PT +H +CMVDLLARAG
Sbjct: 656 KNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGC 715
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ EA + M P + +W LL+ C H I E+ A+ +LKL+P + L+SN
Sbjct: 716 LYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNI 775
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A W+EVA +R M++ G++KVPG S + V ++H F ED SH Q DI +L+ L
Sbjct: 776 HASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDL 835
Query: 550 YLEM 553
+L+M
Sbjct: 836 WLQM 839
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 230/450 (51%), Gaps = 12/450 (2%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
NS I ++ E L +N K ++ +SST+ + AC S+ LK G++I +
Sbjct: 125 NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHIL 184
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ D+ + + +LN+Y KCG + +A AF+ MQ +++V W+ MI+G NGQ +A+
Sbjct: 185 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII 244
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y +M + G D + +I+AC GD G +HG+ I+ + + Q +L+ MY
Sbjct: 245 MYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYT 304
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLV 282
+ G + AS VF +S ++++W ++I+GF Q G L L +M GF +P+
Sbjct: 305 RFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFG 364
Query: 283 SALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG-VPSCARALFDQMQS 340
S AC + + G+ IHG + N+ G S+ DMY+K G +PS RA + Q++S
Sbjct: 365 SVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFY-QIES 423
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
DL+SWN IIA++ G EA+ F QM+ T + PD TF SLL A + +G
Sbjct: 424 PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQI 483
Query: 401 FDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
++ KI ++ C ++ + + + +A + +S L W A+LS C
Sbjct: 484 HSYII---KIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQ 540
Query: 459 HKKFSIGEKVAKKVL--KLNPDDLGIHALV 486
HK+ ++ K +L + PD++ I ++
Sbjct: 541 HKQAGEVFRLFKLMLFSENKPDNITITTIL 570
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 235/492 (47%), Gaps = 16/492 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +YG + ARK F+ + LR V ++ +I YS+ + + +Y QM++ PD
Sbjct: 198 ILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPD 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +KAC D+ +G ++ ++ GY + + ++++++Y + G++ A F
Sbjct: 258 PLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFT 317
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSR 194
+ KDL+ W+SMI G G EA+ ++ M ++G +E + + AC L +
Sbjct: 318 MISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPE 377
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +HG + L +V SL DMYAK G L A F + ++V+W A+I+ F+
Sbjct: 378 FGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFS 437
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+G + +M G PD ++ +S L AC + G IH Y ++ D
Sbjct: 438 DSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAA 497
Query: 314 LGTSVIDMYSKCGVPSCARALF-DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S++ MY+KC A +F D ++ +L+SWN I+++ H E LF M+ +
Sbjct: 498 VCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFS 557
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
KPD+ T ++L + +E G V + ++D+ A+ G ++
Sbjct: 558 ENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNR-LIDMYAKCGSLKH 616
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK-----KVLKLNPDD---LGIHA 484
A + S + P + W +L+ G + +F +G + K L + P++ LG+ +
Sbjct: 617 ARDVFGS-TQNPDIVSWSSLIVG---YAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLS 672
Query: 485 LVSNFFAMEQKW 496
S+ +E+ W
Sbjct: 673 ACSHIGLVEEGW 684
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 307/541 (56%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ ARK+F+ +P R ++ +II Y+ + FE L+ M +E+ D
Sbjct: 154 LINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHD 213
Query: 76 SSTFTVALKACVSLMDL-KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+T L A +++ DL G++I A++ G + VG++++ +Y KCG +++A+ F
Sbjct: 214 KFIYTSVLSA-LTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTF 272
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E KD + WS+MI G G EA++ + M G E +G+I AC+D+G
Sbjct: 273 ELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALE 332
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGYS++ + T+LVDMYAK G L A F + +IV W ++ISG+A
Sbjct: 333 EGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYA 392
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG + L L MQ P +++ S L AC+ + L+ GK IH T++ F +
Sbjct: 393 QNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVP 452
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G+++ MY+KCG +F +M SRD+++WN +I+ +G G +AL LF ++
Sbjct: 453 IGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGT 512
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KPD+ TF ++LSA SH GLVE G+ +F +M+ ++ I P +HYACMVD+L+RAG++ E
Sbjct: 513 TKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHET 572
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ ++S + + G+ +W LL C N++ + +G +K+++L + + L+S+ +
Sbjct: 573 KEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTAL 632
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ ++V VR+ M+ G+ K PG S +E+ ++H F++ D+ H Q I L++L M
Sbjct: 633 GRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHM 692
Query: 554 R 554
+
Sbjct: 693 K 693
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 250/514 (48%), Gaps = 42/514 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES---PFEVLGLYNQMIKEDV 72
++ LY IV A+ +FE + + V ++N +I YS+K + F V+ L+ +M E+
Sbjct: 51 LVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSF-VMELFQRMRAENT 109
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+ TF+ A S + G + A++ DVFVGSS++N+Y K G M +A
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ + ++ V W+++I+G EA + + M++E D+ + ++ A
Sbjct: 170 VFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+G +H +++ L V +LV MY K G LD A F+ + +TW A+I+G
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITG 289
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+AQ G + L L M G +P + V + AC+ IG L+ GK IHGY+++ ++
Sbjct: 290 YAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQ 349
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ T+++DMY+KCG AR FD ++ D++ W +I+ Y +G E AL+L+ +M
Sbjct: 350 IYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQM 409
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEG--------RYWFDL----------MVSK------ 407
+ P T AS+L A S +E+G +Y F L M +K
Sbjct: 410 ERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLED 469
Query: 408 ----YKIQPTEK--HYACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCHN 458
++ P+ + M+ L++ GE +AL++ + + +T+P +V +LS C +
Sbjct: 470 GNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSH 529
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
G K ++ D+ GI V ++ M
Sbjct: 530 MGLVERG----KVYFRMMLDEFGIVPRVEHYACM 559
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 188/392 (47%), Gaps = 19/392 (4%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P +F L C DL+ G+ I + + G + V++ +S++NLY KCG + +A +
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREA--VDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE + KD+V W+ +ING G + ++ ++RM+ E + G+ A +
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
++ GL H +I+ DV V +SL++MY K G + A VF + N V+W +IS
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G+A +A EL M+ D S L A + GK IH ++ +
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS 247
Query: 312 LV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +G +++ MY KCG A F+ +D I+W+ +I Y G EAL+LF M
Sbjct: 248 IASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMH 307
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-------MVDL 423
KP TF +++A S G +EEG+ + Y ++ Y C +VD+
Sbjct: 308 LNGNKPSEFTFVGVINACSDIGALEEGK-----QIHGYSLKAG---YECQIYFMTALVDM 359
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A+ G + +A K D + EP + +W +++SG
Sbjct: 360 YAKCGSLVDARKGFDYLK-EPDIVLWTSMISG 390
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 310/541 (57%), Gaps = 2/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y ++ +AR++F+ + + + ++ ++ Y+ + L L+ QM RP+
Sbjct: 145 LIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPN 204
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + ALK+C L K+G+ + A+++ Y D++VG ++L LY K G++ EA FE
Sbjct: 205 NFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFE 264
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLGDSR 194
+M + DL+ WS MI+ + + +EA++ + RM++ + + ++QACA L
Sbjct: 265 EMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLN 324
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ L+ +V V +L+D+YAK G ++ + +F + N V W +I G+
Sbjct: 325 LGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYV 384
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
Q G L L M +P V+ S L A A + L+ G+ IH T++ ++ + V
Sbjct: 385 QLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSV 444
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+IDMY+KCG AR FD+M +D +SWN +I Y IHG G EAL+LF M ++
Sbjct: 445 VANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSN 504
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KP+ TF +LSA S++GL+++GR F M+ Y I+P +HY CMV LL R+G+ +EA
Sbjct: 505 SKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEA 564
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+K++ + +P + VW ALL C HK +G+ A++VL++ P D H L+SN +A
Sbjct: 565 VKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATA 624
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++W+ VA VRK M+K +KK PG S VE G +H F + D SH + I +L+ LY +
Sbjct: 625 KRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKT 684
Query: 554 R 554
R
Sbjct: 685 R 685
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 215/429 (50%), Gaps = 4/429 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A KLF+E+PL ++ ++ +SR L ++ +E + FT LK VS
Sbjct: 57 ASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVS 116
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ + +LG+ D FVG+++++ Y CG ++ A F+ + KD+V W+ M
Sbjct: 117 MDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGM 176
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ N +++ + +M+ G + + +++C L + G SVHG +++
Sbjct: 177 VACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCY 236
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ D+ V +L+++Y K+G + A F+ M + +++ W +IS +AQ+ + LEL
Sbjct: 237 DRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCR 296
Query: 269 M-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
M QS P++ + S L ACA + L LG IH ++ D N+ + +++D+Y+KCG
Sbjct: 297 MRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG 356
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ LF ++ ++WN II Y G GE+AL+LF M+ ++P T++S+L
Sbjct: 357 EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLR 416
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + +E GR L + K ++D+ A+ G +++A D M + +
Sbjct: 417 ASASLVALEPGRQIHSLTI-KTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEV 475
Query: 447 AVWVALLSG 455
+ W AL+ G
Sbjct: 476 S-WNALICG 483
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 202/383 (52%), Gaps = 4/383 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS ++ L+ + D G+ + ++ G D+F + +LN YV G + +A F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M + V + ++ G + Q + A R+ +EG + ++ V L++ + +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
LSVH Y + D V T+L+D Y+ G++D A VF + ++V+W +++ +A
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+N +L L +M+ G+ P++ ++ +AL +C + K+GKS+HG ++ +D +L
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-T 372
+G +++++Y+K G + A+ F++M DLI W+++I+ Y +EAL LF +M + +
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+V P++ TFAS+L A + L+ G V K + ++D+ A+ GE+E
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQ-IHSCVLKVGLDSNVFVSNALMDVYAKCGEIEN 360
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
++K+ + STE W ++ G
Sbjct: 361 SVKLF-TGSTEKNEVAWNTIIVG 382
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IKT + +I +Y I AR F+++ + ++N++I YS E L
Sbjct: 435 IKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEAL 494
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSMLN 119
L++ M + + +P+ TF L AC + L G ++ ++ YG + + + M+
Sbjct: 495 NLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQ-DYGIEPCIEHYTCMVW 553
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFN 155
L + G+ +EA+ ++ + ++ W +++ V +
Sbjct: 554 LLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIH 590
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 308/564 (54%), Gaps = 36/564 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR++F+++P + S I AYSR E L + M + +VR T K+C S
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE------------- 135
L+ + +G+++ + G+ + VF ++++N Y K + A + F+
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 136 ------------------KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
KM+ + +V W++MI+ NG + ++RM+ E + +E
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ + ++ CA LGD GL + + ++L ++ V T++++MY K G +D VF +
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M+R ++VTW A+I+G+AQNG + LEL M+S +P+ V+LVS L ACAQ+G ++ G
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG 348
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ I Y R N+ + ++++ MYSKCG AR +FD++ RD ++WN +I I+
Sbjct: 349 ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAIN 408
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G E+A++L+ +M E VKP++ TF L++A +H+G VE G +F M S + I P +H
Sbjct: 409 GFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEH 468
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+AC+VDL R+G + +A + + M EP + +W LLS H + E KK+L+L
Sbjct: 469 FACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELE 528
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
PD+ G + ++SN +A +W+E VRK M+ ++K YS VEV +H F++ D SH
Sbjct: 529 PDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSH 588
Query: 537 NQYEDIVYVLKKLYLEMRAISSWL 560
+ +++ + L L +S+W+
Sbjct: 589 PRSDEVYSTIDGLAL----LSTWV 608
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 209/397 (52%), Gaps = 13/397 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y ++++AR+LF+++ R + ++N++I Y++ + ++ +M E P+
Sbjct: 168 LISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPN 227
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L C L DL+MG I + G+++ V ++ML +YVKCG +++ + F+
Sbjct: 228 EITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFD 287
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M R+D+V WS+MI G NG+ EA++ ++ MK I ++V ++ ++ ACA LG
Sbjct: 288 HMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVET 347
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G + Y R L +V V ++L+ MY+K G++ A +F + + + VTW ++I G A
Sbjct: 348 GERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAI 407
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG A + L M+ +P++++ V + AC G ++LG + + R D N+
Sbjct: 408 NGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELG--LEFFRSMRSDHNISPN 465
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMI 370
++D++ + G A +M+ +++ W ++++ IH + E A +++
Sbjct: 466 IEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLL 525
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
E ++PD+S +LS + S GR+ L V K
Sbjct: 526 E--LEPDNSGNYVILSNIYASA----GRWQEALKVRK 556
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 319/588 (54%), Gaps = 37/588 (6%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
+ L ++ + ++ +Y + A+++F+ L R ++N++I+A+S+ L +
Sbjct: 136 SGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRI 195
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ +M K D++P+S+T+ + + L G +I + V G+ +D+ V ++++N+Y K
Sbjct: 196 FKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGK 254
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG +EA F+KM+++D+V W+ MI V NG EA++ Y+++ EG + + +
Sbjct: 255 CGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSI 314
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ AC+ + G VH + + R L+ +V V T+LV+MYAK G L+ A VF M +
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA 374
Query: 244 VTWGALISGFA----------------------------------QNGLAGSTLELLMEM 269
V W LI +A QNG A + +++ EM
Sbjct: 375 VAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREM 434
Query: 270 Q-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGV 327
+ G +PD+V+ ++ L ACA +G L K++H + + N+V+ ++I+MY++CG
Sbjct: 435 TGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGS 494
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A LF + + ++SW ++A++ +G EAL LF +M VKPD T+ S+L
Sbjct: 495 LEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFV 554
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+H G +E+G +F M + + PT H+A MVDLL R+G + +A ++++SM EP
Sbjct: 555 CTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPV 614
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
W+ L+ C H K +GE A++V +L+P + +SN +A WE+VA VRK M
Sbjct: 615 AWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+ G+KK+PG S +EV+G+LH F K H + ++I L +L+ MRA
Sbjct: 675 ERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRA 722
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 217/424 (51%), Gaps = 12/424 (2%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D +PD+ TF L +C S D+ G + + + D VG++++++Y KC + +A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 131 MVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
FE M +++++V W++MI NG EA+ Y RM +G+ D V + ++ AC+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L R +H L+ + +LV MYA+ G + A +F+++ + +W A
Sbjct: 122 SLAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+I +Q+G L + EM+ C +P+S + ++ + + L G+ IH V
Sbjct: 179 VILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG 237
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
FD +LV+ T++I+MY KCG AR +FD+M+ RD++SWNV+I Y +G EAL L+
Sbjct: 238 FDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQ 297
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
++ K +TF S+L A S + +GR ++ + + +V++ A+
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYAKC 356
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGIHAL 485
G +EEA K+ ++M +A W L+ G + + + A+KV + D + +A+
Sbjct: 357 GSLEEARKVFNAMKNRDAVA-WSTLI-GAYASNGYGKDARKARKVFDRLGSRDTICWNAM 414
Query: 486 VSNF 489
++ +
Sbjct: 415 ITTY 418
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 253/524 (48%), Gaps = 49/524 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++YG + +V AR +FE + R V ++N++I AY++ E L LY +M + +
Sbjct: 48 LISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLG 107
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D TF L AC S L G EI + G + + ++++ +Y + G + +A
Sbjct: 108 TDHVTFVSVLGACSS---LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRM 164
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ +Q +D W+++I +G A+ +K MK + + + + +I +
Sbjct: 165 FQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVL 223
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + + D+ V T+L++MY K G A VF M + ++V+W +I +
Sbjct: 224 PEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG LEL ++ GF+ + VS L AC+ + L G+ +H + + R D +
Sbjct: 284 VQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE----------- 361
+ T++++MY+KCG AR +F+ M++RD ++W+ +I +Y +G+G++
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL 403
Query: 362 -----------------------ALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEG 397
A+ +F +M +KPD TF ++L A + G + E
Sbjct: 404 GSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV 463
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ +S+ +++ ++++ AR G +EEA ++ + + E + W A+++
Sbjct: 464 KA-LHAQISESELESNVVVTNTLINMYARCGSLEEAERLF-AAAKEKTVVSWTAMVAAFS 521
Query: 458 NHKKFSIGEKVAKK--VLKLNPDDL---GIHALVSNFFAMEQKW 496
+ +++ + ++ + + PDD+ I + ++ ++EQ W
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 290/530 (54%), Gaps = 3/530 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y I AR LF+ +P + +N ++ Y + G++ +M + + P+
Sbjct: 188 LIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPN 247
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS--MLNLYVKCGKMNEAMVA 133
S TF L C S + + G ++ V G D V ++ ++++Y KC + A
Sbjct: 248 SVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKI 307
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++ D+V ++MI+G V NG A++ ++ + +E + A+ V + ++ ACA L
Sbjct: 308 FDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAAL 367
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG+ ++ V ++++DMYAK G LDLA F +S + V W ++I+
Sbjct: 368 TLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSC 427
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+QNG ++L +M G + D VS+ +AL ACA + L GK IH + +R F +L
Sbjct: 428 SQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDL 487
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+++IDMYSKCG A +FD M+ ++ +SWN IIA+YG HG +++L+LF M+
Sbjct: 488 FAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGD 547
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++PDH TF +++SA H+G V+EG ++F M + I +HYACMVDL RAG + E
Sbjct: 548 GIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNE 607
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++SM P VW LL C H + E ++ + L+P + G + L+SN A
Sbjct: 608 AFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHAN 667
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+WE V +R M++ G++KVPG S ++VN H F+ D+SH Q I
Sbjct: 668 AGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQI 717
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 237/478 (49%), Gaps = 7/478 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ +Y + A+ +F +L L + +N +I ++ L Y +M+ P
Sbjct: 86 KLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLP 145
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF +KAC L + +G + K +G+ DVFVGSS++ Y + G +++A F
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLF 205
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD V W+ M+NG V NG A + M++ + + V ++ CA
Sbjct: 206 DRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMIN 265
Query: 195 FGLSVHGYSIRRHLNLDVKVQTS--LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
FG +HG + L +D V + L+D+Y K +++A +F + ++IV A+ISG
Sbjct: 266 FGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISG 325
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ NG+ + LE+ + +SV+L S L ACA + L LGK +HG+ ++ +
Sbjct: 326 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 385
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G++++DMY+KCG A F + +D + WN +I S +G EEA+ LF QM
Sbjct: 386 CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 445
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
K D + ++ LSA ++ + G+ M+ + + + ++D+ ++ G ++
Sbjct: 446 AGTKYDCVSISAALSACANLPALHYGKEIHAFMM-RGAFRSDLFAESALIDMYSKCGNLD 504
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
A ++ D+M E W ++++ NH + + +L + PD + A++S
Sbjct: 505 LACRVFDTME-EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 561
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 174/384 (45%), Gaps = 9/384 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C L G + + + G G + +G+ +L +YV CG +A F +++
Sbjct: 53 LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCS 112
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+ MI G GQ A+ Y +M G D+ +I+AC L G VH
Sbjct: 113 EPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDK 172
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
LDV V +SL+ Y++ G + A ++F M + V W +++G+ +NG +
Sbjct: 173 IQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNA 232
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVI 319
+ MEM+ P+SV+ L CA + G +HG V D + ++I
Sbjct: 233 TGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALI 292
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
D+Y KC AR +FDQ D++ +I+ Y ++G AL +F +++ ++ +
Sbjct: 293 DIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 352
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIV 437
T AS+L A + + G+ +L K Y + ++D+ A+ G ++ A +
Sbjct: 353 TLASVLPACAGLAALTLGK---ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 409
Query: 438 DSMSTEPGLAVWVALLSGCHNHKK 461
+S + + W ++++ C + K
Sbjct: 410 IGISDKDAVC-WNSMITSCSQNGK 432
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 5/279 (1%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++Q C D G H + + + + T L+ MY G A ++F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
W +I GF G L +M CG PD + + AC + + LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 300 IHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H F+ ++ +G+S+I YS+ G AR LFD+M S+D + WNV++ Y +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK--YKIQPTEKH 416
+ A +F++M T P+ TFA +LS + ++ G L+VS P
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+A ++D+ + +VE A KI D T + V A++SG
Sbjct: 289 FA-LIDIYFKCRDVEMARKIFDQ-RTPVDIVVCTAMISG 325
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 308/579 (53%), Gaps = 5/579 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K +S + G ++ LY DI +A +F V +N +++AY + +
Sbjct: 271 LLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKS 330
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ QM + P+ T+ L+ C +++GE+I +++ G+ +D++V ++++
Sbjct: 331 FEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G +++A E ++++D+V W+SMI G V + EA+ +K M+ G+ D + +
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
ACA + R GL +H D+ + +LV++YA+ G + A +F+ +
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEH 510
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ +TW LISGF Q+ L L + M+M G + + + +SA+ A A + +K GK +
Sbjct: 511 KDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQV 570
Query: 301 HGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG V+ + + ++I +Y KCG A+ +F +M R+ +SWN II S HG G
Sbjct: 571 HGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG 630
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EAL LF QM + +KP+ TF +L+A SH GLVEEG +F M + Y + P HYAC
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VD+L RAG+++ A + VD M +W LLS C HK IGE AK +L+L P D
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHD 750
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN +A+ KW VRK M+ G++K PG S +EV +HAF + D+ H
Sbjct: 751 SASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLS 810
Query: 540 EDIVYVLKKLYLEMRAISSWLQG----HMEEHEEHDPLS 574
+ I L +L + I + H +E E+ DP +
Sbjct: 811 DQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTA 849
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 13/446 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+EL R ++ +++ Y++ E LY+QM V P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT 143
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC G I + + + ++ FVG++++ LY+ G A F
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M D V ++++I+G G A+ + M+ G+ D V + L+ ACA +GD +
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y ++ ++ D + SL+D+Y K G ++ A +F R N+V W ++ + Q
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ E+ +MQ+ G P+ + L C G ++LG+ IH +++ F+ ++ +
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK G AR + + ++ RD++SW +IA Y H EEAL+ F +M + V
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 375 KPDHSTFASLLSALS-----HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
PD+ AS SA + GL R + + I T +V+L AR G
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT------LVNLYARCGR 497
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
EEA + + + + W L+SG
Sbjct: 498 SEEAFSLFREIEHKDEI-TWNGLISG 522
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 6/437 (1%)
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFV 113
++P ++L L S+ T AL+AC + + EI +V G G D +
Sbjct: 21 DNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLI 80
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
G+ +++LY K G + +A F+++ +D V W +M++G +G +EA Y +M +
Sbjct: 81 GNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAV 140
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
V+ ++ AC G +H ++ + V +L+ +Y G LA
Sbjct: 141 IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF +M + VT+ LISG AQ G L++ EMQ G PD V++ S L ACA +G
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+ GK +H Y ++ F+ + S++D+Y KCG A +F+ +++ WN+++ +
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
YG ++ +F QM T + P+ T+ +L + +G +E G L + K +
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI-KNGFES 379
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
++D+ ++ G +++A KI++ M + + W ++++G H K++
Sbjct: 380 DMYVSGVLIDMYSKYGCLDKARKILE-MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 473 LKLN--PDDLGIHALVS 487
PD++G+ + S
Sbjct: 439 QDCGVWPDNIGLASAAS 455
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 314/594 (52%), Gaps = 71/594 (11%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
L LP + +++S+I A++R VL ++ + + PD+ A+K+C SL
Sbjct: 60 LSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L G+++ A G+ D V SS+ ++Y+KC ++ +A F++M +D+V WS+MI G
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179
Query: 152 LVFNGQPREAVDAYKRMKKEGIDA------------------DEVVMM------------ 181
G EA + + M+ G++ DE V M
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 182 -----GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF- 235
++ A L D G VHGY I++ L D V ++++DMY K G + S VF
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD 299
Query: 236 --------------KNMSR--------------------INIVTWGALISGFAQNGLAGS 261
+SR +N+VTW ++I+ +QNG
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVID 320
LEL +MQ+ G EP++V++ S + AC I L GK IH +++RR F+ V +G+++ID
Sbjct: 360 ALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALID 419
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY+KCG AR FD+M + +L+SWN ++ Y +HG +E + +F M+++ KPD T
Sbjct: 420 MYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVT 479
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
F +LSA + +GL EEG ++ M ++ I+P +HYAC+V LL+R G++EEA I+ M
Sbjct: 480 FTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
EP VW ALLS C H S+GE A+K+ L P + G + L+SN +A + W+E
Sbjct: 540 PFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEEN 599
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+R+ M+ G++K PGYS +EV ++H + D+SH Q +DI+ L KL ++M+
Sbjct: 600 RIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMK 653
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 70/349 (20%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR-------KE---------------- 55
+Y + I+ ARKLF+ +P R V ++++I YSR KE
Sbjct: 148 MYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVS 207
Query: 56 -----SPF-------EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+ F E +G++ M+ + PD ST + L A L D+ +G ++ +
Sbjct: 208 WNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVI 267
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNE-------------------------------AMV 132
+ G G+D FV S+ML++Y KCG + E A+
Sbjct: 268 KQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALE 327
Query: 133 AFEKMQRK----DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
F K + + ++V W+S+I NG+ EA++ ++ M+ G++ + V + LI AC
Sbjct: 328 VFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACG 387
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
++ G +H +S+RR + DV V ++L+DMYAK G + LA F MS +N+V+W A
Sbjct: 388 NISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNA 447
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
++ G+A +G A T+E+ M G +PD V+ L ACAQ G + G
Sbjct: 448 VMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 179/458 (39%), Gaps = 82/458 (17%)
Query: 82 ALKACVS--LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF---EK 136
AL C+S L + + L +D + +S+L+ Y ++ ++
Sbjct: 4 ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ L +SS+I+ + + + + + D ++ I++CA L G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+H ++ D V +SL MY K + A +F M ++V W A+I+G+++
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF----------------------- 293
GL EL EM+S G EP+ VS L GF
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243
Query: 294 ------------LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ- 339
+ +G +HGY +++ + + ++++DMY KCG +FD+++
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303
Query: 340 -------------SR---------------------DLISWNVIIASYGIHGHGEEALSL 365
SR ++++W IIAS +G EAL L
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGR--YWFDLMVSKYKIQPTEKHYACMVDL 423
F M V+P+ T SL+ A + + G+ + F L + I + ++D+
Sbjct: 364 FRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSL---RRGIFDDVYVGSALIDM 420
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
A+ G ++ A + D MS L W A++ G H K
Sbjct: 421 YAKCGRIQLARRCFDKMSAL-NLVSWNAVMKGYAMHGK 457
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I AR+ F+++ + ++N+++ Y+ E + +++ M++ +PD
Sbjct: 417 LIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPD 476
Query: 76 SSTFTVALKACVSLMDLKMGEEIWR----KAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
TFT L AC + EE WR + E G + + ++ L + GK+ EA
Sbjct: 477 LVTFTCVLSACA---QNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAY 533
Query: 132 VAFEKMQ-RKDLVCWSSMINGL-VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
++M D W ++++ V N + A K E + +++ I A
Sbjct: 534 SIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKG 593
Query: 190 LGD 192
L D
Sbjct: 594 LWD 596
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 291/528 (55%), Gaps = 7/528 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
ARK+F+ +P +N+++ S E+ L + +M VRPDS+T L A
Sbjct: 177 ARKVFDAVPSPDTVLWNTLLAGLSGSEA----LEAFVRMAGAGSVRPDSTTLASVLPAAA 232
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ + MG + + G V + +++LY KCG M A F++M+ DLV +++
Sbjct: 233 EVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNA 292
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I+G NG +V+ +K + G+ ++ LI + G +H + ++
Sbjct: 293 LISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG 352
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+ + V T+L +Y + +D A F M + +W A+ISG+AQNGL + L
Sbjct: 353 LDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQ 412
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCG 326
+MQ+ P+ +++ SAL ACAQ+G L LGK +H + + N+ + T++IDMY KCG
Sbjct: 413 QMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCG 472
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ AR +FD M +++++SWNV+I+ YG+HG G EAL L+ M++ + P STF S+L
Sbjct: 473 SIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLY 532
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP-G 445
A SH GLV+EG F M S Y I P +H CMVDLL RAG+++EA +++ G
Sbjct: 533 ACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVG 592
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
+W ALL C HK + + ++K+ +L P++ G + L+SN + ++++ E A VR+
Sbjct: 593 PGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQE 652
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ + K PG +++E+ H F+ D++H Q + I L+KL +M
Sbjct: 653 AKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKM 700
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 199/393 (50%), Gaps = 13/393 (3%)
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
AV G+ D FV S++ LY + N+A F+ + D V W++++ GL EA
Sbjct: 149 AVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL----SGSEA 204
Query: 162 VDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
++A+ RM G + D + ++ A A++ ++ G VH + + L V T L+
Sbjct: 205 LEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLIS 264
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+YAK G ++ A H+F M ++VT+ ALISG++ NG+ GS++EL E+ G P S +
Sbjct: 265 LYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSST 324
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
LV+ + + G L +H + V+ D N + T++ +Y + AR FD M
Sbjct: 325 LVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMP 384
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+ + SWN +I+ Y +G E A++LF QM V+P+ T +S LSA + G + G+
Sbjct: 385 EKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK- 443
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
W +++ K++ ++D+ + G + EA I DSM + + W ++SG H
Sbjct: 444 WVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVSWNVMISGYGLH 502
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
+ + K+ K ++ D +H S F ++
Sbjct: 503 GQGAEALKLYKDMM-----DAHLHPTSSTFLSV 530
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 183/392 (46%), Gaps = 10/392 (2%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K L+ + + V +I+LY D+ AR LF+ + + TYN++I YS +
Sbjct: 249 KCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVE 308
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +++ +RP SST + + + V+ G + V +++ LY
Sbjct: 309 LFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYC 368
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ M+ A AF+ M K + W++MI+G NG AV +++M+ + + + +
Sbjct: 369 RFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISS 428
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+ ACA LG G VH L L+V V T+L+DMY K G + A +F +M N
Sbjct: 429 ALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKN 488
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W +ISG+ +G L+L +M P S + +S L AC+ G +K G ++
Sbjct: 489 VVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTV-- 546
Query: 303 YTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSRDLIS--WNVIIASYGIH 356
+ D+ + G T ++D+ + G A L + + W ++ + +H
Sbjct: 547 FRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVH 606
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
G+ A ++ E ++P+++ + LLS L
Sbjct: 607 KDGDLAKLASQKLFE--LEPENTGYYVLLSNL 636
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 13/258 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L A + LY ND+ SAR+ F+ +P + ++++N++I Y++
Sbjct: 348 VVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMA 407
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ QM +VRP+ T + AL AC L L +G+ + + +V+V ++++++
Sbjct: 408 VALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDM 467
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVKCG + EA F+ M K++V W+ MI+G +GQ EA+ YK M +
Sbjct: 468 YVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTF 527
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHV 234
+ ++ AC S GL G ++ R + D + T +VD+ + G L A +
Sbjct: 528 LSVLYAC-----SHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFEL 582
Query: 235 FKNM--SRINIVTWGALI 250
S + WGAL+
Sbjct: 583 ISEFPKSAVGPGIWGALL 600
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 305/549 (55%), Gaps = 8/549 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
V I +Y + AR++F+ R + +N++I Y + P E + L+ Q+++ E
Sbjct: 258 VSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQ 317
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D TF AL A L L++G ++ ++ V + ++++ +Y +CG + +
Sbjct: 318 FVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSF 377
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F M +D+V W++M++ V NG E + M+K+G D V + L+ ++L
Sbjct: 378 KVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLR 437
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI--VTWGAL 249
G H Y IR + + + + L+DMYAK+G + A +F+ S + TW A+
Sbjct: 438 SQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAM 496
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF- 308
I+G+ QNGL+ + +M P++V+L S L AC +G + LGK IHG+ +R F
Sbjct: 497 IAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFL 556
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ N+ +GT+++DMYSK G + A +F + ++ +++ +I+SYG HG GE ALSLF
Sbjct: 557 NRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHA 616
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ + +KPD TF ++LSA S++GLV+EG F M +YKIQP+ +HY C+ D+L R G
Sbjct: 617 MLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVG 676
Query: 429 EVEEALKIVDSMSTEPG-LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGIHAL 485
V EA + V + E +W +LL C H +F +G+ VA K+L++ G H L
Sbjct: 677 RVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVL 736
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN +A E W+ V VRK MR+ G+ K G S VEV G ++ F+ D H Q +I +
Sbjct: 737 LSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQM 796
Query: 546 LKKLYLEMR 554
L+KL +EM+
Sbjct: 797 LEKLAMEMK 805
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 196/380 (51%), Gaps = 5/380 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
N+ R++F+ + R V +N++I Y + E E ++ M++ +RP +F
Sbjct: 166 NNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVF 225
Query: 84 KACVSLMDLKMGEEIWRKAVELG--YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
A + D ++ V+LG + +D FV SS + +Y + G ++ A F+ ++
Sbjct: 226 PAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN 285
Query: 142 LVCWSSMINGLVFNGQPREAVDAY-KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
W++MI G V N P EA+D + + M+ E D+V + + A + L G +H
Sbjct: 286 TEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLH 345
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
Y ++ L V + +++ MY++ G + + VF NM ++VTW ++S F QNGL
Sbjct: 346 AYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDD 405
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVID 320
L L+ MQ GF DSV+L + L + + ++GK H Y +R + + +ID
Sbjct: 406 EGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLID 465
Query: 321 MYSKCGVPSCARALFDQMQ--SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
MY+K G+ + A+ LF++ RD +WN +IA Y +G EE ++F +MIE V+P+
Sbjct: 466 MYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNA 525
Query: 379 STFASLLSALSHSGLVEEGR 398
T AS+L A + G + G+
Sbjct: 526 VTLASILPACNPMGTIGLGK 545
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 226/467 (48%), Gaps = 21/467 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALKACV 87
A LF+ +P +N+III + P + L Y +M + DS TF+ LKAC
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC-------------GKMNEAMVAF 134
LK+G+ + + +G+ V +S+LN+Y C + F
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M+++++V W++MI+ V + EA ++ M + GI V + + A + D
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYD 235
Query: 195 FGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
++G ++ + D V +S + MYA+ G +D A +F N W +I G
Sbjct: 236 NANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295
Query: 253 FAQNGLAGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-F 310
+ QN ++L ++ M+S F D V+ +SAL A +Q+ +L+LG+ +H Y ++
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTIL 355
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+V+ ++I MYS+CG + +F M RD+++WN +++++ +G +E L L M
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQ 415
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ D T +LLS S+ E G+ ++ ++ IQ E + ++D+ A++G +
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI-RHGIQ-FEGMDSYLIDMYAKSGLI 473
Query: 431 EEALKIVDSMST-EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
A ++ + S + A W A+++G + G V +K+++ N
Sbjct: 474 TTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN 520
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 156/358 (43%), Gaps = 20/358 (5%)
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGID 174
S L+ + G ++A+ F+ + R V W+++I G + N P +A+ Y RM+
Sbjct: 42 SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT--------- 225
D ++ACA + G ++H + +R H V SL++MY+
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161
Query: 226 ----GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
+ DL VF M + N+V W +IS + + ++ M G P VS
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Query: 282 VSALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
V+ A ++ ++G V+ F + + +S I MY++ G AR +FD
Sbjct: 222 VNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCC 281
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVEEG 397
R+ WN +I Y + EA+ LF+Q++E+ D TF S L+A+S +E G
Sbjct: 282 LERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELG 341
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
R ++ I A +V + +R G + + K+ +M E + W ++S
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIV-MYSRCGSIGTSFKVFSNM-LERDVVTWNTMVSA 397
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 299/510 (58%), Gaps = 3/510 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + +A+ +F+ + R V ++N++I Y R + + +Y +M+ V PD
Sbjct: 154 LLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPD 213
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L AC L ++++G E+ E G+ ++ V ++++++YVKCG+M EA + +
Sbjct: 214 CATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAK 273
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+V W+++ING + NG R A+ M+ EG+ + V + L+ AC L
Sbjct: 274 GMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNH 333
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++IR+ + +V V+T+L++MYAK +L+ VF S+ W AL+SGF Q
Sbjct: 334 GKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQ 393
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N LA +EL +M +PD + S L A A + L+ +IH Y +R F + L +
Sbjct: 394 NRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEV 453
Query: 315 GTSVIDMYSKCGVPSCARALFD--QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++D+YSKCG A +F+ ++ +D+I W+ IIA+YG HGHG+ A+ LF QM+++
Sbjct: 454 ASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQS 513
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+H TF S+L A SH+GLV EG F+ M+ +++I HY CM+DLL RAG + +
Sbjct: 514 GVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLND 573
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++ +M P AVW ALL C H+ +GE A+ KL P++ G + L++ +A
Sbjct: 574 AYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAA 633
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W + VR + + G++K+P +S++EV
Sbjct: 634 VGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 204/379 (53%), Gaps = 2/379 (0%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N ++ Y + A LF++L + ++N+++ Y + PF+ L L+ +M+
Sbjct: 47 NLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGS 106
Query: 71 D-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
PD T+ V +KAC L + +G I + + GY +D FV +++L +Y+ G+
Sbjct: 107 GRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEA 166
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F+ MQ + ++ W++MING N +AV+ Y RM G++ D ++ ++ AC
Sbjct: 167 AQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGL 226
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + G VH + ++ V+ +LVDMY K G + A + K M ++VTW L
Sbjct: 227 LKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTL 286
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
I+G+ NG A S L L MQ G +P+SVS+ S L AC + +L GK +H + +R +
Sbjct: 287 INGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKI 346
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ +++ T++I+MY+KC + + +F + WN +++ + + EA+ LF Q
Sbjct: 347 ESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQ 406
Query: 369 MIETMVKPDHSTFASLLSA 387
M+ V+PDH+TF SLL A
Sbjct: 407 MLVKDVQPDHATFNSLLPA 425
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 284/533 (53%), Gaps = 34/533 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+++ Y+ P L LY MI + P+S TF LK+C + G++I +
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR------------------------ 139
+LGY D++V +S++++Y + G++ +A F++
Sbjct: 94 KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153
Query: 140 -------KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
KD+V W++MI+G G +EA++ +K M K + DE M+ ++ ACA
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH + ++K+ +L+D+Y+K G ++ A +F+ +S ++V+W LI G
Sbjct: 214 VELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGG 273
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFN 311
+ L L L EM G P+ V++VS L ACA +G + +G+ IH Y ++ D
Sbjct: 274 YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVT 333
Query: 312 LV--LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L TS+IDMY+KCG A +F+ M + L SWN +I + +HG LF +M
Sbjct: 334 NAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM 393
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ ++PD TF LLSA SHSG ++ GR+ F M Y I P +HY CM+DLL +G
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGL 453
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+EA +++ +M EP +W +LL C H + E A+ ++K+ P++ G + L+SN
Sbjct: 454 FKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNI 513
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+A +W+EVA VR + GMKKVPG S +E++ E+H FI+ DK H + +I
Sbjct: 514 YATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREI 566
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 205/378 (54%), Gaps = 7/378 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y +I SA+++F+E+P++ V ++N++I Y+ S E L L+ +M+K +VRPD
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC +++G ++ + G+G+++ + +++++LY KCG++ A FE
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD+V W+++I G +EA+ ++ M + G ++V ++ ++ ACA LG
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 196 GLSVHGYSIRRHLNLD--VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y ++ ++ ++TSL+DMYAK G ++ A VF +M ++ +W A+I GF
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
A +G A + +L M+ G EPD ++ V L AC+ G L LG+ I + +D
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 314 LG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
L +ID+ G+ A+ + M D + W ++ + HG+ E A S ++
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497
Query: 371 ETMVKPDHSTFASLLSAL 388
+ V+P++ LLS +
Sbjct: 498 K--VEPENPGSYVLLSNI 513
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 38/394 (9%)
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A+ F +Q + + W++M+ G + P A+ Y M G+ + L+++CA
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR--------- 240
G +HG+ ++ D+ V TSL+ MYA+ G L+ A VF S
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 241 ----------------------INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
++V+W A+ISG+A+ G LEL EM PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
++V+ L ACAQ ++LG+ +H + F NL + ++ID+YSKCG A LF+
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+ +D++SWN +I Y +EAL LF +M+ + P+ T S+L A +H G ++ G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318
Query: 398 RYWFDLMVSK--YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
R W + + K + ++D+ A+ G++E A ++ +SM L+ W A++ G
Sbjct: 319 R-WIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFG 376
Query: 456 CHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
H + + G + ++ K + PDD+ L+S
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLS 410
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 129/295 (43%), Gaps = 45/295 (15%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY + +A LFE L + V ++N++I Y+ E L L+ +M++
Sbjct: 236 VNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 295
Query: 73 RPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
P+ T L AC L + +G ++ N + +S++++Y KCG + A
Sbjct: 296 SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAA 355
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M K L W++MI G +G+ D + RM+K GI+ D++ +GL+ AC
Sbjct: 356 HQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSAC--- 412
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT----- 245
+ +G LDL H+FK+M++ +T
Sbjct: 413 --------------------------------SHSGKLDLGRHIFKSMTQDYDITPKLEH 440
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+G +I +GL E++ M EPD V S L AC + G L+L +S
Sbjct: 441 YGCMIDLLGHSGLFKEAKEMIKTMP---MEPDGVIWCSLLKACRRHGNLELAESF 492
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 296/534 (55%), Gaps = 3/534 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L + + ++ YG + + ++F E + ++NSII + K ++ L
Sbjct: 139 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 198
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ MI +P+S T + L V L K G+EI ++ +G D+F+ +S++++Y
Sbjct: 199 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMY 258
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G EA F + R+++V W++MI N P EA+ +M++ G + V
Sbjct: 259 AKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFT 318
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA LG G +H +R L D+ V SL+DMYAK G L A +VF N SR
Sbjct: 319 NVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRK 377
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V++ LI G+++ +L L EM+ G +PD VS V + ACA + LK GK +H
Sbjct: 378 DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVH 437
Query: 302 GYTVRRFDFN-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G +R ++ L + S++D Y+KCG A LF+Q+ +D+ SWN +I YG+ G E
Sbjct: 438 GVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELE 497
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
A+S+F M + V+ D ++ ++LSA SH GLVE G +F M+++ +++PTE HY CM
Sbjct: 498 TAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCM 556
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL RAG VEEA K++ + P +W ALL C + +G + A+ + +L P
Sbjct: 557 VDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHC 616
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
G + L+SN +A +W+E +R+ M+ G KK PG S V++ ++HAF+ E++
Sbjct: 617 GYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 213/385 (55%), Gaps = 3/385 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
++ LYG + AR+LF+E+P R V ++N+II S E Y MI + ++P
Sbjct: 51 LLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKP 110
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ + L +L D +M I +V++G + V +++++ Y KCG + F
Sbjct: 111 NLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVF 170
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ K+ V W+S+INGL G+ +A++A++ M G + V + ++ +L +
Sbjct: 171 NETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFK 230
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+S+R D+ + SL+DMYAK+GH AS +F N+ R NIV+W A+I+ +A
Sbjct: 231 AGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N L + +++MQ G P++V+ + L ACA++GFL GK IH VR +L
Sbjct: 291 LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLF 350
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+IDMY+KCG AR +F+ + +D +S+N++I Y ++L+LF +M
Sbjct: 351 VSNSLIDMYAKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 409
Query: 374 VKPDHSTFASLLSALSHSGLVEEGR 398
KPD +F ++SA ++ +++G+
Sbjct: 410 KKPDVVSFVGVISACANLAALKQGK 434
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 215/456 (47%), Gaps = 37/456 (8%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ V+ D TF LK C D+ G E+ +LG+ DV+VG+++L LY CG
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQ 185
+N+A F++M +D+V W+++I L NG EA + Y M + I + V ++ L+
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
A L D +H YS++ L+ V +LVD Y K G + VF N V+
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++I+G A G L M G +P+SV++ S L ++ K GK IHG+++
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R + ++ + S+IDMY+K G + A +F + R+++SWN +IA+Y ++ EA+
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTE 414
+QM ET P+ TF ++L A + G + G+ DL VS I
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYA 360
Query: 415 K----HYACMVDLLARAGEVEEALKIVDSMSTE------------------PGLAVWVAL 452
K H A V +R EV + I+ T+ P + +V +
Sbjct: 361 KCGCLHSARNVFNTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGV 420
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+S C N G++V L+ + L H VSN
Sbjct: 421 ISACANLAALKQGKEVHGVALR---NHLYSHLFVSN 453
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 296/534 (55%), Gaps = 3/534 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L + + ++ YG + + ++F E + ++NSII + K ++ L
Sbjct: 288 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 347
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ MI +P+S T + L V L K G+EI ++ +G D+F+ +S++++Y
Sbjct: 348 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMY 407
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G EA F + R+++V W++MI N P EA+ +M++ G + V
Sbjct: 408 AKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFT 467
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA LG G +H +R L D+ V SL+DMYAK G L A +VF N SR
Sbjct: 468 NVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRK 526
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V++ LI G+++ +L L EM+ G +PD VS V + ACA + LK GK +H
Sbjct: 527 DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVH 586
Query: 302 GYTVRRFDFN-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G +R ++ L + S++D Y+KCG A LF+Q+ +D+ SWN +I YG+ G E
Sbjct: 587 GVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELE 646
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
A+S+F M + V+ D ++ ++LSA SH GLVE G +F M+++ +++PTE HY CM
Sbjct: 647 TAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCM 705
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL RAG VEEA K++ + P +W ALL C + +G + A+ + +L P
Sbjct: 706 VDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHC 765
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
G + L+SN +A +W+E +R+ M+ G KK PG S V++ ++HAF+ E++
Sbjct: 766 GYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 819
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 213/385 (55%), Gaps = 3/385 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
++ LYG + AR+LF+E+P R V ++N+II S E Y MI + ++P
Sbjct: 200 LLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKP 259
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ + L +L D +M I +V++G + V +++++ Y KCG + F
Sbjct: 260 NLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVF 319
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ K+ V W+S+INGL G+ +A++A++ M G + V + ++ +L +
Sbjct: 320 NETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFK 379
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+S+R D+ + SL+DMYAK+GH AS +F N+ R NIV+W A+I+ +A
Sbjct: 380 AGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA 439
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N L + +++MQ G P++V+ + L ACA++GFL GK IH VR +L
Sbjct: 440 LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLF 499
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+IDMY+KCG AR +F+ + +D +S+N++I Y ++L+LF +M
Sbjct: 500 VSNSLIDMYAKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 558
Query: 374 VKPDHSTFASLLSALSHSGLVEEGR 398
KPD +F ++SA ++ +++G+
Sbjct: 559 KKPDVVSFVGVISACANLAALKQGK 583
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 229/485 (47%), Gaps = 38/485 (7%)
Query: 39 RGVDTYNSIIIAYSRK-ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
R +N++I A+S F+ YN+M++ V+ D TF LK C D+ G E
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
+ +LG+ DV+VG+++L LY CG +N+A F++M +D+V W+++I L NG
Sbjct: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGD 240
Query: 158 PREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
EA + Y M + I + V ++ L+ A L D +H YS++ L+ V
Sbjct: 241 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 300
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
+LVD Y K G + VF N V+W ++I+G A G L M G +P
Sbjct: 301 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 360
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
+SV++ S L ++ K GK IHG+++R + ++ + S+IDMY+K G + A +F
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIF 420
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+ R+++SWN +IA+Y ++ EA+ +QM ET P+ TF ++L A + G +
Sbjct: 421 HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 396 EGR----------YWFDLMVSKYKIQPTEK----HYACMVDLLARAGEVEEALKIVDSMS 441
G+ DL VS I K H A V +R EV + I+
Sbjct: 481 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSE 540
Query: 442 TE------------------PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
T+ P + +V ++S C N G++V L+ + L H
Sbjct: 541 TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALR---NHLYSH 597
Query: 484 ALVSN 488
VSN
Sbjct: 598 LFVSN 602
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/580 (30%), Positives = 289/580 (49%), Gaps = 51/580 (8%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A LF+ +P + V + S++ +R P L ++ M++ V P+ AL A
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C L L+ GE++ AV G+ D ++GS ++ +Y +CG + A F++M D+V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL--------------- 190
+S+I+ NG+ A +A +M K+G+ +E M ++ AC +
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGL 243
Query: 191 -----------------------------------GDSRFGLSVHGYSIRRHLNLDVKVQ 215
G G +H +I+ L D++V
Sbjct: 244 RSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVS 303
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+L+ MY +TG ++ + + ++V+W IS QNG + LL +M S GF
Sbjct: 304 NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 363
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ + S L +CA + L G H ++ D + G ++I+MYSKCG AR
Sbjct: 364 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLA 423
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
FD M + D+ SWN +I + HG +AL +F +M +KPD STF +L +HSG+V
Sbjct: 424 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 483
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
EEG +F LM+ +Y P HYACM+D+L R G +EAL++++ M EP +W LL+
Sbjct: 484 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 543
Query: 455 GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKV 514
C H+ IG+ A ++++L+ D + L+SN +AM +WE+ VR+ M ++G+KK
Sbjct: 544 SCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKD 603
Query: 515 PGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G S +E+N E+H F D SH + I +L +L M+
Sbjct: 604 AGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 643
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 197/427 (46%), Gaps = 63/427 (14%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + LN VK G++ +A+ F++M RK++V W+S+++G NG+P A+ + M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMV 106
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ ++ + ACADLG R G VH ++R D + + L++MY++ G L
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF M ++V + +LIS F +NG E L++M G +P+ ++ + L AC
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 290 QIGFLKLGKSIHGYTVRR----------------------------FDFNLVLG------ 315
++ LG+ IHGY +++ F ++VLG
Sbjct: 227 RV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIG 282
Query: 316 ---------------------TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+++ MY + G+ A+ +++++ DL+SW I++
Sbjct: 283 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 342
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+G GE+A++L QM P+ F+S+LS+ + +++G F + K
Sbjct: 343 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG-MQFHCLALKLGCDSEI 401
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
++++ ++ G++ A D M T + W +L+ G H + +V K+
Sbjct: 402 CTGNALINMYSKCGQMGSARLAFDVMHTH-DVTSWNSLIHGHAQHGDANKALEVFSKMRS 460
Query: 475 --LNPDD 479
+ PDD
Sbjct: 461 NGIKPDD 467
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 295/528 (55%), Gaps = 7/528 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACV 87
ARK+F+ +P +N+++ E+ L + +M+ VRPDS+T +L+A
Sbjct: 168 ARKVFDTVPSPDTILWNTLLAGLPGSEA----LEAFVRMVDAGRVRPDSTTLASSLRAAA 223
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ MG + V+ G V + +++LY KCG M+ A F++M DLV +++
Sbjct: 224 EASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNA 283
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I+G NG +V+ +K + G + ++ +I + G +H + ++
Sbjct: 284 LISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKAR 343
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+ D V T+L +Y + ++ A +F M + +W A+ISG+AQNGL + L
Sbjct: 344 LDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQ 403
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
MQ +P+ +++ S L ACA +G L LGK +H + + + N+ + T++IDMY+KCG
Sbjct: 404 LMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCG 463
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ AR++FD+M +++++SWN +I+ YG+HG G EAL L+ M++ + P STF S++
Sbjct: 464 SIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIY 523
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP-G 445
A SH GLV+EG+ F +M ++Y+I P +H CMVDLL RAG++ EAL+++ G
Sbjct: 524 ACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIG 583
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
VW ALL C HK + + ++K+ +L+ ++ G + L+SN + ++ + E A VR+
Sbjct: 584 PGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQE 643
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ + K PG +++E+ H F+ D H Q E I L++L +M
Sbjct: 644 AKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKM 691
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 211/407 (51%), Gaps = 13/407 (3%)
Query: 74 PDSSTFTVALKACVSLM-----DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
PDS +F A + S D + +V GY D FV S++ LY K + +
Sbjct: 107 PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGD 166
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQAC 187
+A F+ + D + W++++ GL + EA++A+ RM G + D + ++A
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAA 222
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A+ G VHGY ++ L V T L+ +Y+K G +D A +F M ++V +
Sbjct: 223 AEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYN 282
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
ALISG++ NG+ S++EL E+ + G+ P+S +LV+ + + G L + +H + V+
Sbjct: 283 ALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKA 342
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
R D + ++ T++ +Y + AR++FD M + + SWN +I+ Y +G E A++LF
Sbjct: 343 RLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALF 402
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
M E V+P+ T +S LSA +H G + G+ W ++SK K++ ++D+ A+
Sbjct: 403 QLMQELNVQPNPITISSTLSACAHLGALSLGK-WVHRIISKEKLELNVYVMTALIDMYAK 461
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
G + EA I D M + + W A++SG H + + K+ K +L
Sbjct: 462 CGSIAEARSIFDRMDNK-NVVSWNAMISGYGLHGQGAEALKLYKDML 507
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 155/329 (47%), Gaps = 6/329 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L+ + + V +++LY D+ SA+ LF+ + + YN++I YS +
Sbjct: 239 VKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSV 298
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ ++ RP+SST + + + V+ D V +++ LY
Sbjct: 299 ELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLY 358
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+ M A F+ M K + W++MI+G NG AV ++ M++ + + + +
Sbjct: 359 CRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITIS 418
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+ ACA LG G VH + L L+V V T+L+DMYAK G + A +F M
Sbjct: 419 STLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK 478
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N+V+W A+ISG+ +G L+L +M P S + +S + AC+ G + G+ +
Sbjct: 479 NVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKV- 537
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCG 326
+ V ++ + G T ++D+ + G
Sbjct: 538 -FRVMTNEYRITPGIEHCTCMVDLLGRAG 565
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 11/257 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L A + LY ND+ SAR +F+ + + ++++N++I Y++
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ M + +V+P+ T + L AC L L +G+ + R + +V+V ++++++
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDM 458
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + EA F++M K++V W++MI+G +GQ EA+ YK M I
Sbjct: 459 YAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTF 518
Query: 181 MGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ +I AC+ D G F + + Y I ++ T +VD+ + G L+ A +
Sbjct: 519 LSVIYACSHGGLVDEGQKVFRVMTNEYRI----TPGIEHCTCMVDLLGRAGKLNEALELI 574
Query: 236 KNM--SRINIVTWGALI 250
S I WGAL+
Sbjct: 575 SEFPQSAIGPGVWGALL 591
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 313/586 (53%), Gaps = 73/586 (12%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
++ LY + +LFE++ R V ++N++I Y K E L L+++M+ V
Sbjct: 172 NNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVL 231
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN----LYVKCGKMNE 129
PD T + C L DL+MG+ + V+ N +++ S+LN +Y KCGKM+E
Sbjct: 232 PDEITMVSLVSTCAKLKDLEMGKRLHLYIVD----NKLWIRGSLLNCLVDMYSKCGKMDE 287
Query: 130 A-------------------MVA--------------FEKMQRKDLVCWSSMINGLVFNG 156
A +V+ F+KM + LV W++M++G V G
Sbjct: 288 AHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGG 347
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
E+++ +++M+ E + DEV ++ ++ AC L D G SVH + + + +D +
Sbjct: 348 YYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGN 407
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG------------------- 257
+L+D+YAK G LD A F+ + + +W +++ GF ++G
Sbjct: 408 ALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVS 467
Query: 258 ------------LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
L + E+ +MQS +PD +L+S L +CA++G L G ++ Y
Sbjct: 468 WNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIE 527
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ + +LGT++IDMY KCG A +F Q+ +++ W ++A+Y + G EA+
Sbjct: 528 KNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAID 587
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
L+L+M E VKPDH TF +LL+A SH GLV+EG +F+ + S Y I PT HY CMVDLL
Sbjct: 588 LYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLL 647
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
R G +EE +K ++ M EP +++W +L+ C +H + E+ K++++++P + G H
Sbjct: 648 GRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHV 707
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
L+SN +A +W++V+ VR + ++G+ K PG++++E NG +H F+
Sbjct: 708 LLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFV 753
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 245/520 (47%), Gaps = 67/520 (12%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I NL +++A N++ A ++ +N+++ ++ P EV
Sbjct: 58 LITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEV 117
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L Y M+ + V D STF + AC D+K+G E+ + ++ G+G + + ++++ L
Sbjct: 118 LECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGL 177
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCGK+ E FEKM +D++ W++MI+ V G REA+D + M G+ DE+ M
Sbjct: 178 YSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITM 237
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHL-------------------------------- 208
+ L+ CA L D G +H Y + L
Sbjct: 238 VSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDE 297
Query: 209 -NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+DV + T+LV Y K+ +D A +F M+ ++V+W ++SG+ Q G +LEL
Sbjct: 298 SEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQ 357
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+M+ PD V+LV+ L AC + LG+S+H + V + LG +++D+Y+KCG
Sbjct: 358 QMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCG 417
Query: 327 -----------VPS-------------C-------ARALFDQMQSRDLISWNVIIASYGI 355
+P C AR F+++ +D++SWN ++ +Y
Sbjct: 418 KLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVK 477
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
H E+ +F +M + VKPD +T SLLS+ + G + G W ++ + K +I
Sbjct: 478 HDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHG-IWVNVYIEKNEIGIDAM 536
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ + G VE A +I + E + VW A+++
Sbjct: 537 LGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 301/545 (55%), Gaps = 5/545 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
V ++ +Y + A LF+ E + + +++ Y++ ++ + + M +
Sbjct: 200 VTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQ 259
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V + TF L AC S++ GE++ V+ G+G++V+V S+++++Y KCG + A
Sbjct: 260 GVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNA 319
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
E M+ D+V W+S++ G V +G EA+ +K M + D+ ++ C +
Sbjct: 320 KNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--V 377
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
S SVHG I+ V +LVDMYAKTG +D A VF+ M ++++W +L+
Sbjct: 378 VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLV 437
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFD 309
+G+AQN +L++ +M+ G PD + S L ACA++ L+ GK +H +
Sbjct: 438 TGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLR 497
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++ + S++ MY+KCG A A+F MQ +D+I+W II Y +G G +L + M
Sbjct: 498 WSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAM 557
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ + +PD TF LL A SH+GLV+EGR +F M Y I+P +HYACM+DL R+G+
Sbjct: 558 VSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGK 617
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA +++D M +P VW +LLS C H+ + E+ A + +L P + + ++SN
Sbjct: 618 LDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNM 677
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
++ +KW +VA +RK M+ G+ K PG S +E+N ++ FI +D+ H + +I + ++
Sbjct: 678 YSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEI 737
Query: 550 YLEMR 554
L ++
Sbjct: 738 ILRIK 742
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 236/447 (52%), Gaps = 7/447 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I+ Y +V AR+LF+ + T++SII Y + E L+ M E
Sbjct: 98 SWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEG 157
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ T L+ C SL ++ GE I V+ G+ +VFV + ++++Y KC ++EA
Sbjct: 158 WKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAE 217
Query: 132 VAFEKMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
F+ ++ RK+ V W++M+ G NG +AV+ ++ M +G++ ++ ++ AC+
Sbjct: 218 FLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSS 277
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ FG VHG+ ++ +V VQ++LVDMYAK G L A ++ + M ++V+W +L
Sbjct: 278 VLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSL 337
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
+ GF ++GL L L M + D + S +L C +G + KS+HG ++ F
Sbjct: 338 MVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS-VLNCCVVGSIN-PKSVHGLIIKTGF 395
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ ++ +++DMY+K G CA +F++M +D+ISW ++ Y + EE+L +F
Sbjct: 396 ENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCD 455
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M T V PD AS+LSA + L+E G+ L K ++ ++ Y +V + A+ G
Sbjct: 456 MRVTGVNPDQFIVASILSACAELTLLEFGKQ-VHLDFIKSGLRWSQSVYNSLVAMYAKCG 514
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
+++A I SM + + W A++ G
Sbjct: 515 CLDDADAIFVSMQVK-DVITWTAIIVG 540
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 204/422 (48%), Gaps = 58/422 (13%)
Query: 111 VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV-----------FNGQP- 158
++ + +LN K G++N+A F+KM +KD W++MI+ V F+G
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 159 -------------------REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
EA D ++ M+ EG A + + +++ C+ LG + G +
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNG 257
HG+ ++ +V V T LVDMYAK + A +FK + R N V W A+++G+AQNG
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
+E M + G E + + + L AC+ + G+ +HG+ V+ F N+ + +
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++DMY+KCG A+ + + M+ D++SWN ++ + HG EEAL LF M +K
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364
Query: 377 DHSTFASLLSAL---------SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
D TF S+L+ H +++ G YK+ +VD+ A+
Sbjct: 365 DDYTFPSVLNCCVVGSINPKSVHGLIIKTG-------FENYKLVSNA-----LVDMYAKT 412
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
G+++ A + + M E + W +L++G +N + S+ +V +NPD + ++
Sbjct: 413 GDMDCAYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASI 471
Query: 486 VS 487
+S
Sbjct: 472 LS 473
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 12/259 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT Y ++ +Y D+ A +FE++ + V ++ S++ Y++ S E
Sbjct: 390 IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEES 449
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ M V PD L AC L L+ G+++ ++ G V +S++ +
Sbjct: 450 LKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAM 509
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG +++A F MQ KD++ W+++I G NG+ R ++ Y M G D +
Sbjct: 510 YAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 569
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHV 234
+GL+ AC S GL G + +N ++ ++D++ ++G LD A +
Sbjct: 570 IGLLFAC-----SHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 624
Query: 235 FKNMS-RINIVTWGALISG 252
M + + W +L+S
Sbjct: 625 LDQMDVKPDATVWKSLLSA 643
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 293 FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
F+ +SIH T ++ ++ +++ SK G + AR LFD+M +D SWN +I+S
Sbjct: 47 FMAFLRSIHTTTAASYE-SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISS 105
Query: 353 YGIHGHGEEALSLF 366
Y G EA LF
Sbjct: 106 YVNVGRLVEARELF 119
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 299/556 (53%), Gaps = 10/556 (1%)
Query: 4 TNLSAYGNSVGRIIALYGGK---------NDIVSARKLFEELPLRGVDTYNSIIIAYSRK 54
TNL + G + +++ G +I + K+F+E+P R T+ ++I R
Sbjct: 136 TNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA 195
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
L ++ M + V DS + +ALKA L G I + ++ G+ + FV
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+S+ +Y KCGK++ + F KM+ D+V W++++ + G+ + A+KRM+ +
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+E +I CA+ ++G +H + + + V S++ +Y+K G L S V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F +M +I+TW +I+ ++Q G E L M+S G +P+ +L S L C + L
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK +H + + + ++ +++I MY+KCG + A +F D+ISW +I+ Y
Sbjct: 436 EQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGY 495
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
HGH +EA+ LF + + ++PD TF +L+A SH+G+V+ G Y+F+ M Y I P+
Sbjct: 496 AEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPS 555
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
++HY CM+DLL RAG + +A ++ SM + VW LL C H G++ A +VL
Sbjct: 556 KEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVL 615
Query: 474 KLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
KL+P+ G H ++N FA + KW+E A +R M+ G+ K PG+S V+V + AF+ D
Sbjct: 616 KLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGD 675
Query: 534 KSHNQYEDIVYVLKKL 549
+SH Q EDI +L++L
Sbjct: 676 RSHPQGEDIYNILEEL 691
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 237/464 (51%), Gaps = 12/464 (2%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVA 82
N + AR LF++LP R ++ +II Y E L L+++M ++ ++R D ++
Sbjct: 63 NHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLG 122
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
LK C ++ G + +V+ G N VFVGS++L++Y+K G++ + F++M ++
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+++I GLV G + + M + ++ D ++A AD G G S+H
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQ 242
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
++++ + + V SL MY K G LD H F+ M +++V+W +++ + Q G
Sbjct: 243 TLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCG 302
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDM 321
L+ M++ P+ + + + CA LK G+ +H + + F L + S++ +
Sbjct: 303 LQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTL 362
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSKCG + +F M+ RD+I+W+ IIA+Y G+GEEA +M KP+
Sbjct: 363 YSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFAL 422
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI-VDSM 440
AS+LS ++E+G+ ++S ++ T + ++ + A+ G + EA KI +DS
Sbjct: 423 ASVLSVCGSMAILEQGKQLHAHVLS-VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 441 STEPGLAVWVALLSG----CHNHKKFSIGEKVAKKVLKLNPDDL 480
+ + W A++SG H+ + + E + K + L PD +
Sbjct: 482 KDD--IISWTAMISGYAEHGHSQEAIELFENIQK--VGLRPDSV 521
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 153/290 (52%), Gaps = 2/290 (0%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D+ ++ L + VK + +A F+++ ++D V W+++I+G V + EA+ + +M+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 170 KEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ + D ++ ++ C + +G ++HG+S++ L V V ++L+DMY K G +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ VF M N VTW A+I+G + G + + L M E DS + AL A
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
A G L G+SIH T+++ FD N + S+ MY+KCG F +M++ D++SW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
I+ +Y G + L F +M + V P+ TF++++S ++ ++ G
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWG 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 19/300 (6%)
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL--M 267
+D+ + + + KT HL A +F + + + V+W +ISG+ + + L L M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKL-GKSIHGYTVRRFDFNLV-LGTSVIDMYSKC 325
+QS D L L C +G L G ++HG++V+ N V +G++++DMY K
Sbjct: 107 RLQS-ELRIDPFLLSLGLKTCG-LGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKI 164
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + +FD+M +R+ ++W +I G+ E L+ F M + V+ D +A L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTE 443
A + SG + GR + K E + + + + G+++ L M T
Sbjct: 225 KASADSGALNHGR---SIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRT- 280
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS---NFFAMEQKWEE 498
+ W +++ K G + K++ N P++ A++S NF + KW E
Sbjct: 281 LDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARL--KWGE 338
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 299/545 (54%), Gaps = 9/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK---EDV 72
+I +Y D+ ARK F+E+ + + T+N++I YSR L +Y M+ E +
Sbjct: 100 LITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGM 159
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ TF+ AL AC + D+ G EI + V GY +D V ++++N+Y KCG + A
Sbjct: 160 KPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARK 219
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++++ +D++ W++MI+G G +A++ ++RM + V +GL+ AC +L D
Sbjct: 220 VFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLED 279
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK-TGHLDLASHVFKNMSRINIVTWGALIS 251
G ++H D+ + L++MY K + L+ A VF+ M +++TW LI
Sbjct: 280 LEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIV 339
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+ Q G A L++ +MQ P+ ++L + L ACA +G + GK++H R
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++VL S+++MY++CG +F ++ + L+SW+ +IA+Y HGH L F +++
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + D T S LSA SH G+++EG F MV + + P +H+ CMVDLL+RAG +
Sbjct: 460 QEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRL 519
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL-NPDDLGIHALVSNF 489
E A ++ M P W +LLSGC H +VA K+ +L + D+ L+SN
Sbjct: 520 EAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNV 579
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +W++ VRKT + +K PG S +E+N +H F+ DKSH + E I +K+L
Sbjct: 580 YAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRL 636
Query: 550 YLEMR 554
+M+
Sbjct: 637 SKQMK 641
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 235/454 (51%), Gaps = 10/454 (2%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+YG + A +F + ++ I+ A++R E LG Y +M+ E +RPD +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
F VA+ C S DLK G+ + +E D+ +G++++ +Y +C + A F++M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRM---KKEGIDADEVVMMGLIQACADLGDSR 194
+K LV W+++I G NG R A+ Y+ M EG+ D + + AC +GD
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G + ++ D VQ +L++MY+K G L+ A VF + +++ W +ISG+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNL 312
+ G A LEL M +P+ V+ + L AC + L+ G++IH VR ++ +L
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIH-RKVREDGYESDL 299
Query: 313 VLGTSVIDMYSKCGVP-SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V+G +++MY+KC AR +F++M++RD+I+WN++I +Y +G ++AL +F QM
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V P+ T +++LSA + G +G+ L+ S + + ++++ R G ++
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASG-RCKADVVLENSLMNMYNRCGSLD 418
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ + + ++ + L W L++ H G
Sbjct: 419 DTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY KCG + A A+F ++ + +SW +I+A++ +GH EAL + +M+ ++PD +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
F + S S +++G+ +++ ++ ++ + AR ++E A K D M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ L W AL++G + K+ + ++ +P+ + A+
Sbjct: 121 GKKT-LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAIT 165
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 298/563 (52%), Gaps = 38/563 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +FE + + +N+++ ++ P L +Y +M+ P+S +F LK+C
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY---------------------VKC--- 124
+ G +I + ++LG G D +V +S++++Y V C
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 125 -------GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
G A F+++ +D+V W++MI G V NG+ EA++ +K M + + DE
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 178 VVMMGLIQACADLGDSRFGLSVHGY----SIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
++ ++ ACA G G VH + + +K+ +L+D+Y+K G ++ A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
+F+ +S ++V+W LI G+ L L L EM G P+ V+L+S L ACA +G
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316
Query: 294 LKLGKSIHGYTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
+ +G+ IH Y ++ L TS+IDMY+KCG A +F+ M R L SWN +I
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
+ +HG A LF +M V+PD TF LLSA SHSGL++ GR F M Y +
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P +HY CM+DLL +G +EA +++ +M EP +W +LL C H + E A+
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
K++K+ P++ G + L+SN +A +WE+VA VR + GMKKVPG S +EV+ +H FI
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFI 556
Query: 531 MEDKSHNQYEDIVYVLKKLYLEM 553
+ DK H + +I ++L+++ +++
Sbjct: 557 IGDKLHPRRREIYHMLEEMDVQL 579
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 201/388 (51%), Gaps = 15/388 (3%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y + D SARK+F+E+ R V ++N++I Y E L L+ +M++ +
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEI--WRKAVEL--GYGNDVFVGSSMLNLYVKCGKM 127
VRPD T + AC +++G ++ W + G+ + + + +++++LY KCG +
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE + KD+V W+++I G +EA+ ++ M + G ++V ++ ++ AC
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPAC 311
Query: 188 ADLGDSRFGLSVHGYSIR--RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
A LG G +H Y + + + + ++TSL+DMYAK G ++ A VF +M ++ +
Sbjct: 312 AHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS 371
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W A+I GFA +G A + +L M+ EPD ++ V L AC+ G L LG+ I
Sbjct: 372 WNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMT 431
Query: 306 RRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+ D+NL +ID+ G+ A + M D + W ++ + HG+ E
Sbjct: 432 Q--DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSAL 388
A S ++I+ ++P++S LLS +
Sbjct: 490 LAESFAQKLIK--IEPENSGSYVLLSNI 515
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 218 LVDMYAKTGHLD---LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
L+++ + H D A VF+ + N++ W ++ G A + S LE+ + M S G
Sbjct: 1 LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH 60
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG------- 326
P+S S L +CA+ + G+ IH ++ + + TS+I MY++ G
Sbjct: 61 LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120
Query: 327 ---------VPSC---------------ARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
V SC AR +FD++ RD++SWN +I Y +G EEA
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---WFDLMVSKYKIQPTEKHYAC 419
L LF +M+ T V+PD T S++SA + SG +E GR W D + + K
Sbjct: 181 LELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNA 240
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++DL ++ G+VE A + + +S + + W L+ G
Sbjct: 241 LIDLYSKCGDVETAFGLFEGLSCKD-VVSWNTLIGG 275
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 286/535 (53%), Gaps = 5/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA Y I A LF V +N II A+S L LY++M++ ++
Sbjct: 40 LIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQAT 99
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF LKAC L D ++G V GY +DVFV +S++ +Y + G + + FE
Sbjct: 100 NFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFE 159
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +++V WSSM+ NG+ E + + RM EGI + ++ A A +
Sbjct: 160 RMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAPNR---GSIVNAMACIHREHE 216
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
I L+ D VQ + + MYA+ G +D+A F + ++V W ++I + Q
Sbjct: 217 ADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQ 276
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVL 314
L + LEL +M+ G PDSV+L+S + A + + +L + +HG R F N + L
Sbjct: 277 ADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIAL 336
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+VID+Y KCG AR FD+M +R+LISW+ +I+ YG+HGHG EAL LF QM + +
Sbjct: 337 DTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM-KASI 395
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPDH F +LSA SH GL+ EG F M + + P +HYACMVDLL RAG + EA
Sbjct: 396 KPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQ 455
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ M P VW ALL C H E A+ + L+ ++ G + L+SN +A
Sbjct: 456 AFIERMPITPDAGVWGALLGACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSG 515
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
K +E +R M+ G++K G++++E+ +++ F+ D S+ Q + I L+KL
Sbjct: 516 KRKEADDIRALMKSRGVRKTVGHTIIEIKNKVYTFVAGDTSNPQTDLIYSELRKL 570
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 156/357 (43%), Gaps = 22/357 (6%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+S++ Y G ++ A F ++ W+ +I R ++ Y RM + GI
Sbjct: 38 TSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQ 97
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
A L++AC L D G H + + DV V SL+ MY + G D + V
Sbjct: 98 ATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQV 157
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI--- 291
F+ M N+V+W +++ +A NG L L M + G P+ S+V+A +AC
Sbjct: 158 FERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAPNRGSIVNA-MACIHREHE 216
Query: 292 --GFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
F ++ D + + + + MY++CG AR F + +DL++W +
Sbjct: 217 ADDFCRV------VIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSM 270
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I +Y AL LF QM + PD T SL+ A+S+ + R+ ++ +
Sbjct: 271 IEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSF- 329
Query: 410 IQPTEKHYA---CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKK 461
+ H A ++DL + G +E A K D MS L W ++S G H H +
Sbjct: 330 ---FKNHIALDTAVIDLYVKCGNLEYARKCFDRMSAR-NLISWSTMISGYGMHGHGR 382
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 298 KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
KS+H ++ + + L TS+I Y+ G S A ALF S ++ WN II ++
Sbjct: 21 KSLHA-SILKSHLHPHLCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTP 79
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSA 387
H +L L+ +M++ ++ + TF LL A
Sbjct: 80 HSRNSLRLYSRMLQLGIQATNFTFPFLLKA 109
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 299/536 (55%), Gaps = 2/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
++ +Y + AR LF+ + V ++N+II YS++ V L +M +E+ VR
Sbjct: 340 LVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRV 399
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T L AC L +EI A G+ D V ++ + Y KC ++ A F
Sbjct: 400 NEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVF 459
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M+ K + W+++I NG P +++D + M G+D D + L+ ACA L R
Sbjct: 460 CGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLR 519
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ +R L LD + SL+ +Y + + L +F M ++V W +I+GF+
Sbjct: 520 CGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFS 579
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QN L L+ +M S G +P +++ L AC+Q+ L+LGK +H + ++ +
Sbjct: 580 QNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAF 639
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++IDMY+KCG ++ +FD++ +D WNVIIA YGIHGHG +A+ LF M
Sbjct: 640 VTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKG 699
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+PD TF +L A +H+GLV EG + M + Y ++P +HYAC+VD+L RAG++ EA
Sbjct: 700 GRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEA 759
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
LK+V+ M EP +W +LLS C N+ IGE+V+KK+L+L P+ + L+SN +A
Sbjct: 760 LKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGL 819
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW+EV VR+ M+++G+ K G S +E+ G ++ F++ D S ++ + I KL
Sbjct: 820 GKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKL 875
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 212/390 (54%), Gaps = 6/390 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVR 73
RIIA+Y +R +F+ + + YN+++ YSR + + L+ +++ D+
Sbjct: 133 RIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLA 192
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T KAC + D+++GE + A++ G +D FVG++++ +Y KCG + A+
Sbjct: 193 PDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKV 252
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM---KKEGIDADEVVMMGLIQACADL 190
FE M+ ++LV W+S++ NG E +KR+ ++EG+ D M+ +I ACA +
Sbjct: 253 FETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAV 312
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G+ R G+ VHG + + + +V V SLVDMY+K G+L A +F N+V+W +I
Sbjct: 313 GEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTII 372
Query: 251 SGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
G+++ G ELL EMQ + V++++ L AC+ L K IHGY R F
Sbjct: 373 WGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGF 432
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ ++ + + Y+KC CA +F M+ + + SWN +I ++ +G ++L LFL
Sbjct: 433 LKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLV 492
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR 398
M+++ + PD T SLL A + + G+
Sbjct: 493 MMDSGMDPDRFTIGSLLLACARLKFLRCGK 522
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 148/287 (51%), Gaps = 6/287 (2%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY-KR 167
NDV + + ++ +Y CG +++ F+ + KDL ++++++G N R+A+ + +
Sbjct: 126 NDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL 185
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ + D + + +ACA + D G +VH +++ D V +L+ MY K G
Sbjct: 186 LSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGF 245
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAG---STLELLMEMQSCGFEPDSVSLVSA 284
++ A VF+ M N+V+W +++ ++NG G + L+ + G PD ++V+
Sbjct: 246 VESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTV 305
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
+ ACA +G +++G +HG + + + S++DMYSKCG ARALFD +++
Sbjct: 306 IPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNV 365
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFASLLSALS 389
+SWN II Y G L +M E V+ + T ++L A S
Sbjct: 366 VSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 285 LLACAQIGFLKLGKSIHGY--TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC + +G+ +H + ++VL T +I MYS CG PS +R +FD + +D
Sbjct: 99 LRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKD 158
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
L +N +++ Y + +A+SLFL+++ T + PD+ T + A + VE G
Sbjct: 159 LFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVH 218
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
L + A ++ + + G VE A+K+ ++M L W +++ C +
Sbjct: 219 ALALKAGGFSDAFVGNA-LIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVMYACSENGG 276
Query: 462 FSIGEKVAKKVL 473
F V K++L
Sbjct: 277 FGECCGVFKRLL 288
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 287/497 (57%), Gaps = 3/497 (0%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L Y++M ++P++ T+ AC +L+ ++ G + G D V S++ +
Sbjct: 112 LEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITM 171
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y +CGKM +A F+++ +KDLV W+SMI+G EAV ++ M + G +E+ +
Sbjct: 172 YARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSL 231
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ AC +LGD + G V + + + L+ + ++L+ MY K G L A +F +M +
Sbjct: 232 VSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKK 291
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ VTW A+I+G+AQNG++ ++L +M+ PD ++L+ L ACA IG L LGK +
Sbjct: 292 KDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQV 351
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
Y R F ++ +GT+++DMY+KCG A +F M +++ +SWN +I++ HG
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQA 411
Query: 360 EEALSLFLQMIET--MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+EAL+LF M+ V P+ TF +LSA H+GLV+EGR F +M S + + P +HY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+CMVDL +RAG +EEA V +M +P + ALL C K I E+V K +L+L P
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEP 531
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ G + + S +A ++W++ A +R M++ G+ K PG S +++N +LH F D H
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591
Query: 538 QYEDIVYVLKKLYLEMR 554
++ +I +L L ++R
Sbjct: 592 EWIEIHQILDLLIDDLR 608
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 190/389 (48%), Gaps = 34/389 (8%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L G+ +I +Y + ARK+F+E+ + + ++NS+I YS+ E
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+GL+ +M++ +P+ + L AC L DLK+G + VE + F+GS+++++
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F+ M++KD V W++MI G NG EA+ ++ M+ D++ +
Sbjct: 273 YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITL 332
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+G++ ACA +G G V Y+ R DV V T+LVDMYAK G LD A VF M
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPN 392
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVSLVSALLACAQIGFLKLGK 298
N V+W A+IS A +G A L L M + G P+ ++ V L AC G + G+
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGR 452
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+ + + F LV I+ YS C V +RA GH
Sbjct: 453 RL--FHMMSSSFGLV---PKIEHYS-CMVDLFSRA-----------------------GH 483
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSA 387
EEA + M E KPD +LL A
Sbjct: 484 LEEAWDFVMTMPE---KPDEVILGALLGA 509
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 217/446 (48%), Gaps = 22/446 (4%)
Query: 54 KESPFEVLGLYNQMIKEDVRPD------SSTFTVALKACVSLMDLKMGEEIWRKAVELGY 107
K SP ++ Y + K +P+ S F L+ C+S+ LK +I + +
Sbjct: 5 KASP-HLISRYLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQLK---QIHAQLLT--- 57
Query: 108 GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN-GQPREAVDAYK 166
N + +S L A V F + ++ MI GL + A++ Y
Sbjct: 58 -NSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYS 116
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
RMK G+ + + L AC++L G H IRR L+ D V SL+ MYA+ G
Sbjct: 117 RMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCG 176
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ A VF +S+ ++V+W ++ISG+++ AG + L EM GF+P+ +SLVS L
Sbjct: 177 KMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLG 236
Query: 287 ACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC ++G LKLG + + V + N +G+++I MY KCG AR +FD M+ +D ++
Sbjct: 237 ACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVT 296
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y +G EEA+ LF M + PD T +LSA + G ++ G+ ++
Sbjct: 297 WNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ-VEIYA 355
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
S+ Q +VD+ A+ G ++ A ++ M + ++ W A++S H +
Sbjct: 356 SERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVS-WNAMISALAFHGQAQEA 414
Query: 466 EKVAKKVLK----LNPDDLGIHALVS 487
+ K ++ ++P+D+ ++S
Sbjct: 415 LALFKSMMNEGGTVSPNDITFVGVLS 440
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 317/569 (55%), Gaps = 11/569 (1%)
Query: 12 SVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG ++ +Y + ++F+E+ ++ V ++ S++ Y + + L L++QM E
Sbjct: 128 SVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLE 187
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++P+ TF L + ++ G ++ ++ G + +FVG+SM+N+Y K +++A
Sbjct: 188 GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDA 247
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ M+ ++ V W+SMI G V NG EA + + RM+ EG+ + + +I+ CA++
Sbjct: 248 KAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANI 307
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGAL 249
+ F +H I+ + D+ ++T+L+ Y+K +D A +F M + N+V+W A+
Sbjct: 308 KEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAI 367
Query: 250 ISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACA-QIGFLKLGKSIHGYTVRR 307
ISG+ QNG + L +M+ G EP+ + S L ACA ++ GK H +++
Sbjct: 368 ISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 427
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F L + ++++ MY+K G A +F + RDL+SWN +I+ Y HG G+++L +F
Sbjct: 428 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 487
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M ++ D TF ++SA +H+GLV EG+ +FDLMV Y I PT +HY+CMVDL +R
Sbjct: 488 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSR 547
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG +E+A+ +++ M G +W LL+ C H +GE A+K++ L P D + L+
Sbjct: 548 AGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLL 607
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SN +A W+E A VRK M +KK GYS +EV + +F+ D SH Q + I L
Sbjct: 608 SNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKL 667
Query: 547 KKLYLEMRAISSW------LQGHMEEHEE 569
++L + ++ + L EEH+E
Sbjct: 668 EELSIRLKDAGYYPDTKYVLHDVEEEHKE 696
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 236/456 (51%), Gaps = 10/456 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
+++LF+E P +G+ N ++ +SR + E L L+ + + D S+ + LK C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D +G+++ + ++ G+ DV VG+S++++Y+K + + F++M+ K++V W+S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ G NG +A+ + +M+ EGI + ++ A G G+ VH I+ L
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + V S+V+MY+K+ + A VF +M N V+W ++I+GF NGL EL
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G + + + CA I + K +H ++ DF+L + T+++ YSKC
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 328 PSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDHSTFASLL 385
A LF M ++++SW II+ Y +G + A++LF QM E V+P+ TF+S+L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404
Query: 386 SAL-SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
+A + + VE+G+ + + K + +V + A+ G +E A ++ +
Sbjct: 405 NACAAPTASVEQGKQFHSCSI-KSGFSNALCVSSALVTMYAKRGNIESANEVFKR-QVDR 462
Query: 445 GLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLN 476
L W +++SG H K I E++ K L+L+
Sbjct: 463 DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 498
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 193/367 (52%), Gaps = 16/367 (4%)
Query: 1 MIKTNLSA---YGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
+IK+ L + GNS ++ +Y + A+ +F+ + R ++NS+I +
Sbjct: 219 VIKSGLDSTIFVGNS---MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLD 275
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E L+ +M E V+ + F +K C ++ ++ +++ + ++ G D+ + +++
Sbjct: 276 LEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTAL 335
Query: 118 LNLYVKCGKMNEAMVAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDA 175
+ Y KC ++++A F M +++V W+++I+G V NG+ A++ + +M++ EG++
Sbjct: 336 MVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEP 395
Query: 176 DEVVMMGLIQACADLGDS-RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+E ++ ACA S G H SI+ + + V ++LV MYAK G+++ A+ V
Sbjct: 396 NEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEV 455
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
FK ++V+W ++ISG+AQ+G +L++ EM+S E D ++ + + AC G +
Sbjct: 456 FKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLV 515
Query: 295 KLGKSIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVI 349
G+ V+ D+++V + ++D+YS+ G+ A L ++M W +
Sbjct: 516 NEGQRYFDLMVK--DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 573
Query: 350 IASYGIH 356
+A+ +H
Sbjct: 574 LAACRVH 580
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 310/578 (53%), Gaps = 7/578 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK +S+ G ++ LY +DI +A ++F V +N +++A+ + ++ E
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ QM + + P+ T+ L+ C S+ L +GE+I + ++ G+ +V+V S ++++
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K GK++ A V + D+V W+++I+G + EA+ +K M GI +D +
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
I ACA + G +H S + D+ + +LV +YA+ G + A F+ +
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ ++W LISGFAQ+G L++ +M E + SA+ A A I +K GK I
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++R FD ++ + ++I Y+KCG AR F +M ++ +SWN +I Y HG+G
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EA++LF +M + P+H TF +LSA SH GLV +G +F+ M ++ + P HYAC
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYAC 759
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDL++RAG + A K ++ M EP +W LLS C HK +GE A+ +L+L P+D
Sbjct: 760 VVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPED 819
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN +A+ KW+ R+ MR G+KK PG S +EV +HAF + D+ H
Sbjct: 820 SATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLA 879
Query: 540 EDIVYVLKKLYLEMRAISSWLQGHME-----EHEEHDP 572
+ I L +L + I + Q E E+ DP
Sbjct: 880 DKIYEFLAELNKKAAEI-GYFQDRYSLLNDVEQEQKDP 916
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 240/487 (49%), Gaps = 9/487 (1%)
Query: 8 AYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY 64
+GN +++ +Y D+ K+FE++P R V +++ II + K+ VL L+
Sbjct: 40 GFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLF 99
Query: 65 NQMIKEDVRPDSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ MI+E+V P +F L+AC + ++ E+I + + G + + ++ LY K
Sbjct: 100 SCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAK 159
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
G + A F+ + KD V W +MI+G NG EA+ + M GI V +
Sbjct: 160 NGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSV 219
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ C + G +H + +L+ V +LV +Y++ + A VF M +
Sbjct: 220 LSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
V++ +LISG AQ G + LEL +M+ +PD V++ S L ACA G L G+ +H Y
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSY 339
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
++ ++++ +++D+Y C A +F Q+ +++ WNV++ ++G + E+
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
+F QM + P+ T+ S+L + G ++ G V K Q + ++D
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ-IHTQVIKTGFQFNVYVCSVLID 458
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDL 480
+ A+ G+++ A I+ ++ TE + W AL+SG H F+ K K++L + D++
Sbjct: 459 MYAKHGKLDTAHVILRTL-TEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNI 517
Query: 481 GIHALVS 487
G + +S
Sbjct: 518 GFSSAIS 524
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 215/442 (48%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I+SARK+F+ L + ++ ++I +S+ E + L+ +M + P
Sbjct: 153 LIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPT 212
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ L C + +GE++ + G + +V ++++ LY + A F
Sbjct: 213 PYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFS 272
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KMQ KD V ++S+I+GL G A++ + +MK++ + D V + L+ ACA G
Sbjct: 273 KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y I+ ++ D+ V+ +L+D+Y + A +F N+V W ++ F +
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ + +MQ G P+ + S L C +G L LG+ IH ++ F FN+ +
Sbjct: 393 LDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYV 452
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G A + + D++SW +I+ Y H EAL F +M+ +
Sbjct: 453 CSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGI 512
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ D+ F+S +SA + + +GR VS Y + + +V L AR G ++EA
Sbjct: 513 QSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN--ALVSLYARCGRIKEA 570
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + ++ W L+SG
Sbjct: 571 YLEFEKIDAKDSIS-WNGLISG 591
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 183/385 (47%), Gaps = 12/385 (3%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T+ L C++ L +++ K ++LG+GN+ + + ++++Y G ++ + F
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD--LGD 192
E M + + W +I+G + +D + M +E + E+ +++AC+ +G
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG- 127
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R+ +H I L + L+ +YAK G + A VF N+ + V+W A+ISG
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
F+QNG + L EM + G P S L C +I +G+ +H F +
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV---FKYGS 244
Query: 313 VLGTSV----IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
L T V + +YS+ A +F +MQS+D +S+N +I+ G + AL LF +
Sbjct: 245 SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTK 304
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M +KPD T ASLLSA + +G + +G ++ K I ++DL
Sbjct: 305 MKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI-KAGISSDMIVEGALLDLYVNCS 363
Query: 429 EVEEALKIVDSMSTEPGLAVWVALL 453
+++ A ++ + TE + +W +L
Sbjct: 364 DIKTAHEMFLTAQTE-NVVLWNVML 387
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 37/343 (10%)
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M+ GI A+ + L+ C + G +HG ++ + + LVD+Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD VF++M ++ +W +ISGF + ++ L+L M P +S S L A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 288 CA--QIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
C+ +IG ++ + IH + + ++ +I +Y+K G+ AR +FD + ++D +
Sbjct: 121 CSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR------ 398
SW +I+ + +G+ EEA+ LF +M + P F+S+LS + L + G
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239
Query: 399 ---------YWFDLMVSKYKIQPT---------------EKHYACMVDLLARAGEVEEAL 434
Y + +V+ Y P E + ++ LA+ G + AL
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299
Query: 435 KIVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
++ M + P +LLS C ++ GE++ V+K
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIK 342
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 299/556 (53%), Gaps = 10/556 (1%)
Query: 4 TNLSAYGNSVGRIIALYGGK---------NDIVSARKLFEELPLRGVDTYNSIIIAYSRK 54
TNL + G + +++ G +I + K+F+E+P R T+ ++I R
Sbjct: 136 TNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA 195
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
L ++ M + V DS + +ALKA L G I + ++ G+ + FV
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+S+ +Y KCGK++ + F KM+ D+V W++++ + G+ + A+KRM+ +
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+E +I CA+ ++G +H + + + V S++ +Y+K G L S V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F +M +I+TW +I+ ++Q G E L M+S G +P+ +L S L C + L
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK +H + + + ++ +++I MY+KCG + A +F D+ISW +I+ Y
Sbjct: 436 EQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGY 495
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
HGH +EA+ LF + + ++PD TF +L+A SH+G+V+ G Y+F+ M Y I P+
Sbjct: 496 AEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPS 555
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
++HY CM+DLL RAG + +A ++ SM + VW LL C H G++ A +VL
Sbjct: 556 KEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVL 615
Query: 474 KLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
KL+P+ G H ++N FA + KW+E A +R M+ G+ K PG+S V+V + AF+ D
Sbjct: 616 KLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGD 675
Query: 534 KSHNQYEDIVYVLKKL 549
+SH Q EDI +L++L
Sbjct: 676 RSHPQGEDIYNILEEL 691
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 237/464 (51%), Gaps = 12/464 (2%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVA 82
N + AR LF++LP R ++ +II Y E L L+++M ++ ++R D ++
Sbjct: 63 NHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLG 122
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
LK C ++ G + +V+ G N VFVGS++L++Y+K G++ + F++M ++
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+++I GLV G + + M + ++ D ++A AD G G S+H
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQ 242
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
++++ + + V SL MY K G LD H F+ M +++V+W +++ + Q G
Sbjct: 243 TLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCG 302
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDM 321
L+ M++ P+ + + + CA LK G+ +H + + F L + S++ +
Sbjct: 303 LQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTL 362
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSKCG + +F M+ RD+I+W+ IIA+Y G+GEEA +M KP+
Sbjct: 363 YSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFAL 422
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI-VDSM 440
AS+LS ++E+G+ ++S ++ T + ++ + A+ G + EA KI +DS
Sbjct: 423 ASVLSVCGSMAILEQGKQLHAHVLS-VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 441 STEPGLAVWVALLSG----CHNHKKFSIGEKVAKKVLKLNPDDL 480
+ + W A++SG H+ + + E + K + L PD +
Sbjct: 482 KDD--IISWTAMISGYAEHGHSQEAIELFENIQK--VGLRPDSV 521
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 153/290 (52%), Gaps = 2/290 (0%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D+ ++ L + VK + +A F+++ ++D V W+++I+G V + EA+ + +M+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 170 KEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ + D ++ ++ C + +G ++HG+S++ L V V ++L+DMY K G +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ VF M N VTW A+I+G + G + + L M E DS + AL A
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
A G L G+SIH T+++ FD N + S+ MY+KCG F +M++ D++SW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
I+ +Y G + L F +M + V P+ TF++++S ++ ++ G
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWG 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 19/300 (6%)
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL--M 267
+D+ + + + KT HL A +F + + + V+W +ISG+ + + L L M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKL-GKSIHGYTVRRFDFNLV-LGTSVIDMYSKC 325
+QS D L L C +G L G ++HG++V+ N V +G++++DMY K
Sbjct: 107 RLQS-ELRIDPFLLSLGLKTCG-LGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKI 164
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + +FD+M +R+ ++W +I G+ E L+ F M + V+ D +A L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTE 443
A + SG + GR + K E + + + + G+++ L M T
Sbjct: 225 KASADSGALNHGR---SIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRT- 280
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS---NFFAMEQKWEE 498
+ W +++ K G + K++ N P++ A++S NF + KW E
Sbjct: 281 LDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARL--KWGE 338
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 290/510 (56%), Gaps = 15/510 (2%)
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
Y +M K V PD T+ L+AC +L +G + A G ++F ++++++Y K
Sbjct: 138 YQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAK 197
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-------- 175
CG + A F+ M ++D+V W+SMI+ GQ EA++ ++RM+ EG +
Sbjct: 198 CGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMV 257
Query: 176 ------DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
D V ++ + AC+ +G R G +HG ++R + V +L+ MYA+ ++
Sbjct: 258 RGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDME 317
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A +F+ + +VTW ++S FA + A + EM G +P+ V++V+ L CA
Sbjct: 318 CARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCA 377
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
++ L+ G+ +HG+ V+ F +L S+IDMYSK G S A+ +FD M D+IS+
Sbjct: 378 RVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTS 437
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+IA YG+ G G AL LF QMI++ +KPDH ++LSA SHSGLV EG F+ MV Y
Sbjct: 438 MIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISY 497
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
I+P +HY+CM+DL ARAG +E+A +++D P +W AL+ CH+ IGE+
Sbjct: 498 GIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERA 557
Query: 469 AKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHA 528
A+K+L++ ++ G + L++N +A W+E+A VRK MR G+ K PG + ++
Sbjct: 558 ARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLGNGFTP 617
Query: 529 FIMEDKSHNQYEDIVYVLKKLYLEMRAISS 558
F++ D+S+ +I VL +L +MR I++
Sbjct: 618 FLVGDRSNPLAPEIYVVLDELSEQMRNINN 647
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 181/374 (48%), Gaps = 20/374 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR--------------KESPFEVL 61
++++Y D+ SARK+F+ + R V ++NS+I +Y+ ++ E +
Sbjct: 191 LMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPV 250
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
GL +M++ D T + L AC + L++G+EI AV + V ++++ +Y
Sbjct: 251 GLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMY 310
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+C M A + F ++ +V W++M++ + EA ++ M G+ + V ++
Sbjct: 311 ARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVV 370
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+ CA + + + G +HG+ ++ + SL+DMY+K+G L +A +VF M
Sbjct: 371 TYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDC 430
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+++++ ++I+G+ G L L +M G +PD + +V+ L AC+ G + G+ +
Sbjct: 431 DMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELF 490
Query: 302 GYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGH 358
V + + + +ID+Y++ G+ A + D + W ++ + G+
Sbjct: 491 NKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGN 550
Query: 359 ---GEEALSLFLQM 369
GE A L+M
Sbjct: 551 IEIGERAARKLLEM 564
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K Y +I +Y + A+ +F+ + + +Y S+I Y +
Sbjct: 392 IVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVA 451
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
L L+ QMI ++PD L AC + GEE++ K V + YG + S M+
Sbjct: 452 LRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMV-ISYGIKPQMEHYSCMI 510
Query: 119 NLYVKCGKMNEA 130
+LY + G + +A
Sbjct: 511 DLYARAGLLEKA 522
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 299/545 (54%), Gaps = 28/545 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VR 73
+I +Y +D S K+F+E+ R T+NSII A ++ + L L+ +M + + ++
Sbjct: 216 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQ 275
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TFT L C + + G +I + ++ V + ++++Y +CG++N A
Sbjct: 276 PDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEI 335
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +M ++ W+SMI G NG+ +EA+ +K+M+ GI D + ++ +C L DS
Sbjct: 336 FNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDS 395
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI--NIVTWGALIS 251
+ G +H + +R + + +Q LVDMYAK G +D A V+ + N W ++++
Sbjct: 396 QKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILA 455
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G+A GL + +EM E D +++V+ +
Sbjct: 456 GYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL------------------------ 491
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
LVL T+++DMYSKCG + AR +FD M ++++SWN +I+ Y HG +EAL L+ +M +
Sbjct: 492 LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPK 551
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ P+ TF ++LSA SH+GLVEEG F M Y I+ +HY CMVDLL RAG +E
Sbjct: 552 KGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLE 611
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A + V+ M EP ++ W ALL C HK +G A+++ +L+P + G + ++SN +A
Sbjct: 612 DAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYA 671
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W+EV +R+ M+ G+KK PG S +E+N E+ F K+H + E+I L+ L L
Sbjct: 672 AAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTL 731
Query: 552 EMRAI 556
+ + +
Sbjct: 732 QSKGL 736
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 191/395 (48%), Gaps = 10/395 (2%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
DV P ++ ++ C+ + G+ I + + GY D ++ + +L LY + G +++
Sbjct: 68 DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 131 MVA---FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE+M ++L W++MI EA + RM K G+ D ++ C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L G VH I D V +L+DMYAK + VF M N VTW
Sbjct: 186 GALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 245
Query: 248 ALISGFAQNGLAGSTLELLMEMQSC--GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
++IS AQ G L L + MQ G +PD + + L CA G+ IH + +
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 305
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R N+++ T ++ MYS+CG + A+ +F++M R+ SWN +I Y +G +EAL
Sbjct: 306 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 365
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF QM +KPD + +S+LS+ ++GR + +V + ++ +VD+
Sbjct: 366 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV-RNTMEEEGILQVVLVDMY 424
Query: 425 ARAGEVEEALKIVD-SMSTEPGLAVWVALLSGCHN 458
A+ G ++ A K+ D ++ + A+W ++L+G N
Sbjct: 425 AKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYAN 459
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 172/362 (47%), Gaps = 24/362 (6%)
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
K D + + LIQ C D + G S+H I N D + T ++ +YA++G LD
Sbjct: 64 KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 230 ---LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
A +F+ M N+ W +I +A+ + M G PD+ + SAL
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALR 183
Query: 287 ACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
C + GK +H + F + +G ++IDMY+KC +FD+M R+ ++
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT 243
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETM--VKPDHSTFASLLSALSHSGLVEEGR----Y 399
WN II++ GH +AL LFL+M E+ ++PD TF +LL+ ++ +GR +
Sbjct: 244 WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 303
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++K I TE +V + + G + A +I + M+ E W +++ G +
Sbjct: 304 LIRANITKNIIVETE-----LVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQN 357
Query: 460 KKFSIGEKVAKKVLKLN---PDDLGIHALVSNFFAM--EQKWEEVAG--VRKTMRKSGMK 512
+ ++ K+ ++LN PD + +++S+ ++ QK E+ VR TM + G+
Sbjct: 358 GETQEALRLFKQ-MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 416
Query: 513 KV 514
+V
Sbjct: 417 QV 418
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 310/557 (55%), Gaps = 15/557 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ ++A+YG + S++ L R + T+N+++ + + E E L +M+ E V
Sbjct: 235 INTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV 294
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAM 131
PD T + L AC L L+ G+E+ A++ G + FVGS+++++Y C ++
Sbjct: 295 EPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGC 354
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
F+ M + + W++MI G N EA+ + M++ G+ A+ M G++ AC
Sbjct: 355 RVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRS 414
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G ++HG+ ++R L+ D VQ +L+DMY++ G +D+A +F M ++VTW +I
Sbjct: 415 GAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTII 474
Query: 251 SGFAQNGLAGSTLELLMEMQ-----------SCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+G+ + L +L +MQ +P+S++L++ L +CA + L GK
Sbjct: 475 TGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE 534
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH Y ++ ++ +G++++DMY+KCG +R +FDQ+ R++I+WNVI+ +YG+HG+
Sbjct: 535 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGN 594
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
++A+ + M+ VKP+ TF S+ +A SHSG+V EG F M Y ++P+ HYA
Sbjct: 595 SQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYA 654
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
C+VDLL RAG V+EA ++++ + A W +LL C H IGE A+ +++L P
Sbjct: 655 CVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEP 714
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ + L++N ++ W + VR+ M+ G++K PG S +E E+H F+ D SH
Sbjct: 715 NVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 774
Query: 538 QYEDIVYVLKKLYLEMR 554
Q E + L+ L+ MR
Sbjct: 775 QSEKLRGYLETLWERMR 791
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 200/404 (49%), Gaps = 10/404 (2%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND-VFVGSSM 117
E + Y MI ++PD+ F LKA L D+ +G++I + GYG D V V +++
Sbjct: 76 EAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTL 135
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+NLY KCG F+++ ++ V W+S+I+ L + A++A++ M E ++
Sbjct: 136 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSS 195
Query: 178 VVMMGLIQACADLGDSR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
++ + AC++ G VH Y +R+ L+ + +LV MY K G L + +
Sbjct: 196 FTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVL 254
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
+ ++VTW ++S QN LE L EM G EPD ++ S L AC+ + L
Sbjct: 255 LGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEML 314
Query: 295 KLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ GK +H Y ++ D N +G++++DMY C +FD M R + WN +I
Sbjct: 315 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITG 374
Query: 353 YGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y + + EEAL LF++M E+ + + +T A ++ A SG + +V + +
Sbjct: 375 YAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDR 434
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A M D+ +R G+++ A +I M + L W +++G
Sbjct: 435 DRFVQNALM-DMYSRLGKIDIAKRIFGKME-DRDLVTWNTIITG 476
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 229/468 (48%), Gaps = 22/468 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY D + K+F+ + R ++NS+I + E L + M+ EDV P
Sbjct: 135 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPS 194
Query: 76 SSTFTVALKACVSLM---DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
S T AC + L MG+++ + G N F+ ++++ +Y K GK+ + V
Sbjct: 195 SFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNS-FIINTLVAMYGKMGKLASSKV 253
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+ +DLV W+++++ L N Q EA++ + M EG++ D + ++ AC+ L
Sbjct: 254 LLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEM 313
Query: 193 SRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H Y+++ L+ + V ++LVDMY + VF M I W A+I+
Sbjct: 314 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G+AQN L L +EM +S G +S ++ + AC + G ++IHG+ V+R D
Sbjct: 374 GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLD 433
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--L 367
+ + +++DMYS+ G A+ +F +M+ RDL++WN II Y E+AL + +
Sbjct: 434 RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKM 493
Query: 368 QMIE---------TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
Q++E +KP+ T ++L + + + +G+ + K + +
Sbjct: 494 QILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGS 552
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVW--VALLSGCHNHKKFSI 464
+VD+ A+ G ++ + K+ D + + W + + G H + + +I
Sbjct: 553 ALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQDAI 599
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W ++ V + REAV Y M GI D L++A ADL D G +H +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 205 RRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ +D V V +LV++Y K G VF +S N V+W +LIS L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGF---LKLGKSIHGYTVRRFDFNLVLGTSVID 320
E M EP S +LVS LAC+ L +GK +H Y +R+ + N + +++
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVA 240
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY K G + ++ L + RDL++WN +++S + EAL +M+ V+PD T
Sbjct: 241 MYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFT 300
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+L A SH ++ G+ + + + +VD+ +V ++ D M
Sbjct: 301 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM 360
Query: 441 STEPGLAVWVALLSG 455
+ + +W A+++G
Sbjct: 361 -FDRKIGLWNAMITG 374
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK NL+ ++ +Y + +RK+F+++P+R V T+N I++AY + + +
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599
Query: 62 GLYNQMIKEDVRPDSSTFTVALKAC 86
+ M+ + V+P+ TF AC
Sbjct: 600 DMLRMMMVQGVKPNEVTFISVFAAC 624
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 286/497 (57%), Gaps = 3/497 (0%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L Y++M ++P++ T+ AC +L+ ++ G + G D V S++ +
Sbjct: 112 LEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITM 171
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y +CGKM +A F+++ +KDLV W+SMI+G EAV ++ M + G +E+ +
Sbjct: 172 YARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSL 231
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ AC +LGD + G V + + + L+ + ++L+ MY K G L A +F +M +
Sbjct: 232 VSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKK 291
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ VTW A+I+G+AQNG++ ++L +M+ PD ++L+ L ACA IG L LGK +
Sbjct: 292 KDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQV 351
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
Y R F ++ +GT+++DMY+KCG A +F M ++ +SWN +I++ HG
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQA 411
Query: 360 EEALSLFLQMIET--MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+EAL+LF M+ V P+ TF +LSA H+GLV+EGR F +M S + + P +HY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+CMVDL +RAG +EEA V +M +P + ALL C K I E+V K +L+L P
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEP 531
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ G + + S +A ++W++ A +R M++ G+ K PG S +++N +LH F D H
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591
Query: 538 QYEDIVYVLKKLYLEMR 554
++ +I +L L ++R
Sbjct: 592 EWIEIHQILDLLIDDLR 608
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 191/389 (49%), Gaps = 34/389 (8%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L G+ +I +Y + ARK+F+E+ + + ++NS+I YS+ E
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+GL+ +M++ +P+ + L AC L DLK+G + VE + F+GS+++++
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F+ M++KD V W++MI G NG EA+ ++ M+ D++ +
Sbjct: 273 YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITL 332
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+G++ ACA +G G V Y+ R DV V T+LVDMYAK G LD A VF M +
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPK 392
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVSLVSALLACAQIGFLKLGK 298
N V+W A+IS A +G A L L M + G P+ ++ V L AC G + G+
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGR 452
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+ + + F LV I+ YS C V +RA GH
Sbjct: 453 RL--FHMMSSSFGLV---PKIEHYS-CMVDLFSRA-----------------------GH 483
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSA 387
EEA + M E KPD +LL A
Sbjct: 484 LEEAWDFVMTMPE---KPDEVILGALLGA 509
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 217/446 (48%), Gaps = 22/446 (4%)
Query: 54 KESPFEVLGLYNQMIKEDVRPD------SSTFTVALKACVSLMDLKMGEEIWRKAVELGY 107
K SP ++ Y + K +P+ S F L+ C+S+ LK +I + +
Sbjct: 5 KASP-HLISRYLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQLK---QIHAQLLT--- 57
Query: 108 GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN-GQPREAVDAYK 166
N + +S L A V F + ++ MI GL + A++ Y
Sbjct: 58 -NSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYS 116
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
RMK G+ + + L AC++L G H IRR L+ D V SL+ MYA+ G
Sbjct: 117 RMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCG 176
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ A VF +S+ ++V+W ++ISG+++ AG + L EM GF+P+ +SLVS L
Sbjct: 177 KMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLG 236
Query: 287 ACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC ++G LKLG + + V + N +G+++I MY KCG AR +FD M+ +D ++
Sbjct: 237 ACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVT 296
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y +G EEA+ LF M + PD T +LSA + G ++ G+ ++
Sbjct: 297 WNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ-VEIYA 355
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
S+ Q +VD+ A+ G ++ A ++ M + ++ W A++S H +
Sbjct: 356 SERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVS-WNAMISALAFHGQAQEA 414
Query: 466 EKVAKKVLK----LNPDDLGIHALVS 487
+ K ++ ++P+D+ ++S
Sbjct: 415 LALFKSMMNEGGTVSPNDITFVGVLS 440
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 308/558 (55%), Gaps = 14/558 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y N I +A +F+ +P + ++NS+I + E + L+ +M + D
Sbjct: 451 LISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELD 510
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T L AC +G + +V+ G + + +++L++Y C + F
Sbjct: 511 STTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFR 570
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +K++V W++MI G + + M +GI D + ++ A +
Sbjct: 571 NMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQ 630
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHGY+IR + + V +L++MY +++ A VF +++ +I++W LI G+++
Sbjct: 631 GKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSR 690
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N A + L +M F+P++V++ L A A I L+ G+ IH Y +RR F +
Sbjct: 691 NNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYT 749
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY KCG AR LFD++ ++LISW ++IA YG+HG G++A++LF QM + V
Sbjct: 750 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGV 809
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD ++F+++L A HSGL EG +F+ M +YKI+P KHY C+VDLL+ G ++EA
Sbjct: 810 EPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAF 869
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++SM EP ++WV+LL GC H+ + EKVA +V KL P++ G + L++N +A +
Sbjct: 870 EFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAE 929
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+WE V ++ + G+++ G S +EV G++H FI ++++H ++ I L + MR
Sbjct: 930 RWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMR 989
Query: 555 AISSWLQGHMEEHEEHDP 572
E HDP
Sbjct: 990 ------------EEGHDP 995
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 256/524 (48%), Gaps = 36/524 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
R++ Y D+ AR +F+E+P R D + S++ AY++ E + L+ QM V
Sbjct: 135 RLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGV 194
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD+ + LK SL + GE I +LG G V ++++ LY +CG M +AM
Sbjct: 195 SPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQ 254
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D + W+S I+G NG AVD + +M EG + V ++ ++ ACA+LG
Sbjct: 255 VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Query: 193 SRFGLSVHGYSIRRHL---------NLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRIN 242
G VHGYS++ L +D + + LV MY K G + A VF M S+ N
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ-IGFLKLGKSIH 301
+ W ++ G+A+ +L L +M G PD +L S LL C + + G H
Sbjct: 375 VHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHAL-SCLLKCITCLSCARDGLVAH 433
Query: 302 GYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
GY V+ F + ++I Y+K + A +FD+M +D ISWN +I+ +G
Sbjct: 434 GYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNS 493
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQP---TEKH 416
EA+ LF++M + D +T S+L A + S YWF +V Y ++ E
Sbjct: 494 EAIELFVRMWMQGHELDSTTLLSVLPACARS------HYWFVGRVVHGYSVKTGLIGETS 547
Query: 417 YA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA----KK 471
A ++D+ + + +I +M+ + + W A+++ ++ + + +KVA +
Sbjct: 548 LANALLDMYSNCSDWHSTNQIFRNMA-QKNVVSWTAMIT---SYTRAGLFDKVAGLLQEM 603
Query: 472 VLK-LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKV 514
VL + PD + +++ FA ++ ++ V ++GM+K+
Sbjct: 604 VLDGIKPDVFAVTSVLHG-FAGDESLKQGKSVHGYAIRNGMEKL 646
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 185/359 (51%), Gaps = 19/359 (5%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRK--DLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
+G ++ Y+KCG + A + F++M + D+ W+S+++ G +E V +++M+
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
G+ D + +++ A LG G +HG + L V +L+ +Y++ G ++
Sbjct: 192 CGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMED 251
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF +M + ++W + ISG+ NG ++L +M S G E SV+++S L ACA+
Sbjct: 252 AMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAE 311
Query: 291 IGFLKLGKSIHGYTVRR---FDFNLV-------LGTSVIDMYSKCGVPSCARALFDQMQS 340
+GF +GK +HGY+++ +D V LG+ ++ MY KCG AR +FD M S
Sbjct: 312 LGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPS 371
Query: 341 R-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+ ++ WN+I+ Y EE+L LF QM E + PD + LL ++ +G
Sbjct: 372 KGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLV 431
Query: 400 WFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+V K+ + C ++ A++ ++ A+ + D M + ++ W +++SGC
Sbjct: 432 AHGYLV---KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTIS-WNSVISGC 486
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 154/327 (47%), Gaps = 3/327 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + ++ +Y +D S ++F + + V ++ ++I +Y+R +V
Sbjct: 538 VKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVA 597
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
GL +M+ + ++PD T L LK G+ + A+ G + V ++++ +Y
Sbjct: 598 GLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMY 657
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
V C M EA + F+ + KD++ W+++I G N E+ + M + + V M
Sbjct: 658 VNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMT 716
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ A A + G +H Y++RR D +LVDMY K G L +A +F +++
Sbjct: 717 CILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKK 776
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N+++W +I+G+ +G + L +M+ G EPD+ S + L AC G G
Sbjct: 777 NLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFF 836
Query: 302 GYTVRRFDFNLVLG--TSVIDMYSKCG 326
+ + L T ++D+ S G
Sbjct: 837 NAMRKEYKIEPKLKHYTCIVDLLSHTG 863
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSR--DLISWNVIIASYGIHGHGEEALSLFLQMI 370
VLG ++ Y KCG AR +FD+M R D+ W ++++Y G +E +SLF QM
Sbjct: 131 VLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQ 190
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
V PD + +L ++ G + EG L+ K + ++ L +R G +
Sbjct: 191 CCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLL-EKLGLGEACAVANALIALYSRCGCM 249
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E+A+++ DSM ++ W + +SG
Sbjct: 250 EDAMQVFDSMHARDAIS-WNSTISG 273
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 322/572 (56%), Gaps = 9/572 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG + A +F+ + R V ++ +++ + + +P E L L+++M V+P+
Sbjct: 13 LIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPN 72
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ LKAC L L +G +I V+ G+ VG+S++++Y KCG++NEA FE
Sbjct: 73 DFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFE 132
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++L+ W++MI G G +A+ +++M++ G DE ++AC+DLG +
Sbjct: 133 VMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKE 192
Query: 196 GLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + I +++ V +L+D+Y K G L +A VF ++ ++++W ALI G+
Sbjct: 193 GNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGY 252
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
AQ G ++EL +++ + D L S + A ++ GK +H + ++ ++
Sbjct: 253 AQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDI 312
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S++DMY KCG+ + A LF +M +R++ISW V+I YG HG G+EA+ LF +M
Sbjct: 313 SVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLD 372
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+PD T+ ++L SHSGLVE+G+ +F + S + I+ +HYACMVDLL RAG ++E
Sbjct: 373 STEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKE 432
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +VDSM E + +W LLS C H +G++V +L+L+ ++ + ++SN +A
Sbjct: 433 AKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYAD 492
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W+E +R+ ++ +KK G S VE++ E+H F D +H E I +LK++
Sbjct: 493 AGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERR 552
Query: 553 MRAISSWLQG------HMEEHEEHDPLSTAAQ 578
M+ ++ G +EE + D L ++
Sbjct: 553 MKEELGYVYGVKYALHDVEEESKMDNLRVHSE 584
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 207/424 (48%), Gaps = 40/424 (9%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+G+G D+ + + ++ +Y KCG++ A F++M ++++V W++++ G + NG P E++
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ +M G+ ++ ++AC L G +H ++ ++ V S++DMY+K
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G ++ A+ +F+ M N+++W A+I+G+ G L L +MQ G D + S
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 285 LLACAQIGFLKLGKSIHGYTVRR---FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
L AC+ +G +K G IH + + + N + ++ID+Y KCG AR +F ++ +
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW- 400
+ISW +I Y G+ E++ LF Q+ E+ ++ D +S++ + LV++G+
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 401 ------------------FDLMVSKYKIQPTEKHYA-----------CMVDLLARAGEVE 431
D+ + I E+ ++ M+ + G +
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360
Query: 432 EALKIVDSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
EA+++ D M STEP ++A+L GC + G++ ++ + GI A V +
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYH----GIKARVEH 416
Query: 489 FFAM 492
+ M
Sbjct: 417 YACM 420
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 190/377 (50%), Gaps = 21/377 (5%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN 65
++ GNS II +Y I A +FE +P+R + ++N++I Y+ + L L+
Sbjct: 107 VNVVGNS---IIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQ 163
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG--YGNDVFVGSSMLNLYVK 123
+M + D TFT LKAC L +K G +I + G Y + V ++++LYVK
Sbjct: 164 KMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVK 223
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CGK+ A F ++ K ++ W+++I G G E+++ ++++++ I D ++ +
Sbjct: 224 CGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSM 283
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ AD + G +H ++I+ +D+ V S++DMY K G ++ A +F M N+
Sbjct: 284 MGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNV 343
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK----- 298
++W +I+G+ ++GL + L EMQ EPD V+ ++ LL C+ G ++ G+
Sbjct: 344 ISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSR 403
Query: 299 --SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGI 355
S HG R + ++D+ + G A+ L D M + W ++++ +
Sbjct: 404 LCSYHGIKARVEHY-----ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRV 458
Query: 356 HGH---GEEALSLFLQM 369
HG G+E + L++
Sbjct: 459 HGDLELGKEVGGILLRL 475
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 301/535 (56%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARK+F+E+ R + ++N+II AY+ + +++ M++ + +P+
Sbjct: 51 VLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPN 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST+ L++ ++ L++G++I A+ G G++ V +++ N+YVKCG + A + FE
Sbjct: 111 GSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFE 170
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM K+ V W+ ++ G + +A+ + +M EG++ DE V +++ACA L + F
Sbjct: 171 KMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNF 230
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ ++ L +V V T LVD Y K +L+ A+ F+ +S N V+W ALI+G+ Q
Sbjct: 231 GRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQ 290
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
G L+ +++ + +S + S AC+ + G H ++ G
Sbjct: 291 MGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG 350
Query: 316 TS-VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S +I MYS+CG A +F+ + D ++W IIA Y G+ EAL LF +M + V
Sbjct: 351 ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGV 410
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF ++L+A SHSGLV EGR + + M S Y + T HY CMVD+ +RAG ++EAL
Sbjct: 411 RPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEAL 470
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ SM P W LL GC ++ IGE A+ + +L+P+D + L+ N +A
Sbjct: 471 ELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFG 530
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW+E A VRK M + ++K S + V G++H FI+ DK H Q E+I L+ L
Sbjct: 531 KWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEAL 585
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 11/388 (2%)
Query: 72 VRPDSSTFTVALKAC---VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
V P S + +AC SL D ++ E ++ V+ F+ +S+L +Y KCG +
Sbjct: 8 VSPRS--YKCLFEACGKIKSLFDGRLFHEQMQRTVK---NPPEFLENSVLKMYCKCGSLA 62
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
+A F++M+ ++LV W+++I+ NG + + M + + +G +++
Sbjct: 63 DARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLL 122
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
+ G +H ++IR L + V T++ +MY K G L+ A VF+ MS N V W
Sbjct: 123 NPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTG 182
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-R 307
++ G+ Q L L +M + G E D L ACA + L G+ IHG+ V+
Sbjct: 183 IMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLG 242
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ + +GT ++D Y KC A F+ + + +SW+ +I Y G EEAL F
Sbjct: 243 LESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFE 302
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+ V + T+ S+ A S G + K + + + M+ + +R
Sbjct: 303 SLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAI-KSSLVAYQHGESAMITMYSRC 361
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSG 455
G ++ A ++ +S+ +P W A+++G
Sbjct: 362 GRLDYATRVFESID-DPDAVAWTAIIAG 388
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 3/289 (1%)
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M+ GI L +AC + G H R N ++ S++ MY K G
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L A VF M N+V+W +IS +A+NG+ + M +P+ + + L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
L++GK IH + +R N + T++ +MY KCG A +F++M ++ ++W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
I+ Y +AL+LF +M+ V+ D F+ +L A + + GR +V
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV- 239
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K ++ +VD + +E A K + +S EP W AL++G
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWIS-EPNDVSWSALITG 287
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK++L AY + +I +Y + A ++FE + + +II Y+ + + E L
Sbjct: 340 IKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEAL 399
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSMLN 119
L+ +M VRP++ TF L AC S L + + +++ YG + M++
Sbjct: 400 KLFRRMQDCGVRPNAVTFIAVLTAC-SHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVD 458
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+Y + G + EA+ M D + W ++ G
Sbjct: 459 IYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 304/581 (52%), Gaps = 42/581 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI------ 68
++I+ Y ++ A +F+E+ +R +YN+++IAY+ +E F+ L+ I
Sbjct: 62 KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYS 121
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMG---EEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+ RPDS + + LKA D +G ++ + G+ +DVFVG+ M+ Y KC
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLI 184
+ A F++M +D+V W+SMI+G +G + YK M + V ++ +
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
QAC D FGL VH I H+ +D+ + +++ YAK G LD A +F MS + V
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQS-------------------------------CG 273
T+GA+ISG+ +GL + L EM+S CG
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
P++V+L S L + LK GK IH + +R D N+ + TS+ID Y+K G A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+FD + R LI+W II +Y +HG + A SLF QM KPD T ++LSA +HSG
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+ ++ FD M++KY I+P +HYACMV +L+RAG++ +A++ + M +P VW AL
Sbjct: 482 DSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGAL 541
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L+G I ++ ++ P++ G + +++N + +WEE VR M++ G+K
Sbjct: 542 LNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLK 601
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
K+PG S +E L +FI +D S + +++ +++ L M
Sbjct: 602 KIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 5/264 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
+ G II+ Y + A LF E+ G+ T+N++I + EV+ + +MI+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP++ T + L + +LK G+EI A+ G N+++V +S+++ Y K G + A
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + + L+ W+++I +G A + +M+ G D+V + ++ A A G
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 192 DSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV-TWGAL 249
DS + + ++ + V+ +V + ++ G L A M I WGAL
Sbjct: 482 DSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGAL 541
Query: 250 ISGFAQNG---LAGSTLELLMEMQ 270
++G + G +A + L EM+
Sbjct: 542 LNGASVLGDLEIARFACDRLFEME 565
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 34/228 (14%)
Query: 294 LKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
L+L I ++++ +F L + +I Y++ A +FD++ R+ S+N ++ +Y
Sbjct: 42 LQLHARIVVFSIKPDNF---LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 354 GIHGHGEEALSLFLQMIET------MVKPDHSTFASLLSALSHS-------------GLV 394
+A SLFL I + +PD + + +L ALS G V
Sbjct: 99 TSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G + D+ V M+ + +E A K+ D MS E + W +++S
Sbjct: 159 IRGGFDSDVFVGN-----------GMITYYTKCDNIESARKVFDEMS-ERDVVSWNSMIS 206
Query: 455 GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
G F +K+ K +L + ++S F A Q + + G+
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL 254
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 300/536 (55%), Gaps = 11/536 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
+R +F+ L + V +NS+I Y++ E L+NQM DV PD T + K
Sbjct: 77 SRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSE 136
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L G+ I K++ +G+ +D V +S++++Y KCG E+ F++M ++ W+ +
Sbjct: 137 LGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVL 196
Query: 149 INGLVFNGQPR---EAVDAYKRMKKEGIDADEVVMMGLIQAC-ADLGDSRFGLSVHGYSI 204
I G +G E + K+M+ + + D + L+ C D G +G +H Y +
Sbjct: 197 IAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIV 256
Query: 205 RRHLNL----DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+ L L DV + L+DMY+++ + + VF M N+ +W A+I+G+ +NG +
Sbjct: 257 KNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSD 316
Query: 261 STLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L L +MQ G EP+ VSLVS L AC+ L G+ IHG+ VR+ + + L ++
Sbjct: 317 EALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNAL 376
Query: 319 IDMYSKCGVPSCARALF-DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
IDMYSKCG AR +F D +D ISW+ +I+ YG+HG G+EA+ L+ +M++ ++PD
Sbjct: 377 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPD 436
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T +LSA S SGLV EG + +++ Y I+PT + +AC+VD+L RAG+++ AL +
Sbjct: 437 MITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFI 496
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
+M EPG +VW AL+S H + E + +++L P++ + +SN +A ++W+
Sbjct: 497 KAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWD 556
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
VA VR+ M+ ++KVPG S + +N + H F + DK+H I +L L L M
Sbjct: 557 AVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLLTM 612
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 188/391 (48%), Gaps = 13/391 (3%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
+L V+ LK+ + + + LG + + + ++ Y C + + F+ +Q K+
Sbjct: 29 SLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKN 88
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+ W+S+ING N EA + +M + D+ + L + ++LG G S+HG
Sbjct: 89 VFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHG 148
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG---L 258
SIR D V S++ MY K G+ + + VF M+ N +W LI+G+A +G
Sbjct: 149 KSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNF 208
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLAC-AQIGFLKLGKSIHGYTVRR-----FDFNL 312
T E + +MQ PD+ ++ S L C G G+ +H Y V+ D ++
Sbjct: 209 REETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDV 268
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--LQMI 370
LG +IDMYS+ R +FD+M+ R++ SW +I Y +G +EALSLF +Q+I
Sbjct: 269 HLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVI 328
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ ++P+ + S+L A S + GR V K ++ ++D+ ++ G +
Sbjct: 329 DG-IEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRK-ELNNEVSLCNALIDMYSKCGSL 386
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ A ++ + S W +++SG H K
Sbjct: 387 DSARRVFEDDSLCKDAISWSSMISGYGLHGK 417
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 200/401 (49%), Gaps = 21/401 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR------KESPFEVLGLYNQMIK 69
I+++Y + +RK+F+E+ +R ++N +I Y+ +E +E + QM
Sbjct: 165 IMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV---KQMQM 221
Query: 70 EDVRPDSSTFTVALKACVSLM-DLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKC 124
++VRPD+ T + L C G E I + + LG +DV +G ++++Y +
Sbjct: 222 DEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRS 281
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGL 183
K+ F++M+ +++ W++MING V NG EA+ ++ M+ +GI+ + V ++ +
Sbjct: 282 NKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSV 341
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-N 242
+ AC+ G +HG+++R+ LN +V + +L+DMY+K G LD A VF++ S +
Sbjct: 342 LPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKD 401
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W ++ISG+ +G + L +M G PD ++ V L AC++ G + G +I+
Sbjct: 402 AISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYS 461
Query: 303 YTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHG 359
+ + L + ++DM + G A M S W +++ IHG
Sbjct: 462 SVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDL 521
Query: 360 E--EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
E E FL +E ++ + ++L ++ V E R
Sbjct: 522 EMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVR 562
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 302/549 (55%), Gaps = 8/549 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
V I +Y + AR++F+ R + +N++I Y + P E + L+ Q+++ E
Sbjct: 258 VSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQ 317
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D TF AL A L L +G ++ ++ V + ++++ +Y +CG + +
Sbjct: 318 FXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSF 377
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F M +D+V W++M++ V NG E + M+K+G D V + L+ ++L
Sbjct: 378 KVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLR 437
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI--VTWGAL 249
G H Y IR + + + L+DMYAK+G + A +F+ S + TW A+
Sbjct: 438 SQEIGKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAM 496
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF- 308
I+G+ QNGL+ + +M P++V+L S L AC +G + LGK IHG+ +R F
Sbjct: 497 IAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFL 556
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ N+ +GT+++DMYSK G + A +F + ++ +++ +I SYG HG GE ALSLF
Sbjct: 557 NQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHA 616
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ + +KPD TF ++LSA S++GLV+EG F M +YKIQP+ +HY C+ D+L R G
Sbjct: 617 MLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVG 676
Query: 429 EVEEALKIVDSMSTEPG-LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL--GIHAL 485
V EA + V + E +W +LL C H +F +G+ VA K+L++ G H L
Sbjct: 677 RVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVL 736
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN +A E W+ V VRK MR+ G+ K G S VEV G ++ F+ D H Q +I +
Sbjct: 737 LSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQM 796
Query: 546 LKKLYLEMR 554
L+KL +EM+
Sbjct: 797 LEKLAMEMK 805
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 198/381 (51%), Gaps = 7/381 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
N+ R++F+ + R V +N++I Y + E E ++ M++ +RP +F
Sbjct: 166 NNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVF 225
Query: 84 KACVSLMDLKMGEEIWRKAVELG--YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
A + D ++ V+LG Y +D FV SS + +Y + G ++ A F+ ++
Sbjct: 226 PAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN 285
Query: 142 LVCWSSMINGLVFNGQPREAVDAY-KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
W++MI G V N P EA+D + + M+ E D+V + + A + L G +H
Sbjct: 286 TEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLH 345
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
Y ++ L V + +++ MY++ G + + VF NM ++VTW ++S F QNGL
Sbjct: 346 AYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDD 405
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L L+ EMQ GF DSV+L + L + + ++GK H Y +R F + G +I
Sbjct: 406 EGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LI 464
Query: 320 DMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
DMY+K G+ + A+ LF++ RD +WN +IA Y +G EE ++F +MIE V+P+
Sbjct: 465 DMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPN 524
Query: 378 HSTFASLLSALSHSGLVEEGR 398
T AS+L A + G + G+
Sbjct: 525 AVTLASILPACNPMGTIGLGK 545
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 225/467 (48%), Gaps = 21/467 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALKACV 87
A LF+ +P +N+III + P + L Y +M + DS TF+ LKAC
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC-------------GKMNEAMVAF 134
LK+G+ + + +G+ V +S+LN+Y C + F
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M+++++V W++MI+ V + EA ++ M + GI V + + A + D
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYD 235
Query: 195 FGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
++G ++ + D V +S + MYA+ G +D A +F N W +I G
Sbjct: 236 NANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295
Query: 253 FAQNGLAGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-F 310
+ QN ++L ++ M+S F D V+ +SAL A +Q+ +L LG+ +H Y ++
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTIL 355
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+V+ ++I MYS+CG + +F M RD+++WN +++++ +G +E L L +M
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQ 415
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ D T +LLS S+ E G+ ++ ++ IQ E ++D+ A++G +
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI-RHGIQ-FEGMDGYLIDMYAKSGLI 473
Query: 431 EEALKIVDSMST-EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
A ++ + S + A W A+++G + G V +K+++ N
Sbjct: 474 TTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN 520
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 24/360 (6%)
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGID 174
S L+ + G ++A+ F+ + R V W+++I G + N P +A+ Y RM+
Sbjct: 42 SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT--------- 225
D ++ACA + G ++H + +R H V SL++MY+
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161
Query: 226 ----GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
+ DL VF M + N+V W +IS + + ++ M G P VS
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRRF-----DFNLVLGTSVIDMYSKCGVPSCARALFD 336
V+ A ++ ++G V+ DF +V +S I MY++ G AR +FD
Sbjct: 222 VNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVV--SSAIFMYAELGCVDFAREIFD 279
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVE 395
R+ WN +I Y + EA+ LF+Q++E+ D TF S L+A+S ++
Sbjct: 280 CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLD 339
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
GR ++ I A +V + +R G + + K+ +M E + W ++S
Sbjct: 340 LGRQLHAYILKSSTILQVVILNAIIV-MYSRCGSIGTSFKVFSNM-LERDVVTWNTMVSA 397
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 273/487 (56%), Gaps = 15/487 (3%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK-------CGKMNEAMVA- 133
ALK+C +L +G + A+ G D F +++LNLY K +M+ + V
Sbjct: 64 ALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVL 123
Query: 134 ------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
F++M KD+V W++++ G +G+ EA+ + M ++G D + ++
Sbjct: 124 ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A+ D R G+ +HG++ R + DV V +SL+DMYA D + VF N+ + + W
Sbjct: 184 AEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWN 243
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
++++G AQNG L L M G +P V+ S + AC + L LGK +H Y +R
Sbjct: 244 SMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG 303
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
FD N+ + +S+IDMY KCG S AR +FD++QS D++SW +I + +HG EAL LF
Sbjct: 304 GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLF 363
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M +KP+H TF ++L+A SH+GLV++G +F+ M Y I P+ +H+A + D L R
Sbjct: 364 DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
G++EEA + M +P +VW LL C HK + E+VAKK+ L P +G H ++
Sbjct: 424 PGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIIL 483
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SN ++ +W E A +RK+MRK GM+K P S +EV + H F+ DKSH YE I+ L
Sbjct: 484 SNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDAL 543
Query: 547 KKLYLEM 553
+M
Sbjct: 544 NVFSEQM 550
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 148/270 (54%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S RK+F+E+P + V ++N++++ + E LGL +M ++ +PDS T + L
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
D++ G E+ A G+ +DVFVGSS++++Y C + + ++ F+ + +D + W+S
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M+ G NG EA+ ++RM GI V LI AC +L G +H Y IR
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ +V + +SL+DMY K G++ +A +F + +IV+W A+I G A +G A L L
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFD 364
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M+ +P+ ++ ++ L AC+ G + G
Sbjct: 365 RMELGNLKPNHITFLAVLTACSHAGLVDKG 394
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM----GLIQACADLGDSRFGLSVH 200
W+ I G A+ + RM+ A ++ G +++CA LG G S+H
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAK----TGH----------LDLASHVFKNMSRINIVTW 246
++R D +L+++Y K H L+ VF M ++V+W
Sbjct: 82 ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSW 141
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
L+ G A++G G L L+ EM G +PDS +L S L A+ ++ G +HG+ R
Sbjct: 142 NTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATR 201
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F ++ +G+S+IDMY+ C + +FD + RD I WN ++A +G +EAL L
Sbjct: 202 NGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGL 261
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M+ + +KP TF+SL+ A + + G+ V + + ++D+
Sbjct: 262 FRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQ-LHAYVIRGGFDGNVFISSSLIDMYC 320
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G V A +I D + + P + W A++ G
Sbjct: 321 KCGNVSIARRIFDRIQS-PDIVSWTAMIMG 349
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 275/476 (57%), Gaps = 4/476 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D F L C ++ +K ++ + G +D+ V + +L + K + A + F
Sbjct: 2 DPDFFISTLFKCRNIFQIK---QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLF 58
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
KM+ +D V WS MI G V NG ++ + + G D + +I+AC D
Sbjct: 59 NKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI 118
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ L+LD V ++LVDMYAK G +D A +F M + ++VT +I+G+A
Sbjct: 119 MGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYA 178
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLV 313
+ G + L +M+ GF PD V++V+ + ACA++G + + +H Y RR+ ++
Sbjct: 179 ECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVE 238
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
LGT++IDMY+KCG +R +FD+M+ +++ISW+ +I +YG HG G EAL LF M+ +
Sbjct: 239 LGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSG 298
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ P+ TF SLL A SH+GLV++G F LM Y ++P KHY CMVDLL RAG +++A
Sbjct: 299 IIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQA 358
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L+++++M E +W A L C H++ + EK AK +L L + G + L+SN +A
Sbjct: 359 LRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANA 418
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W++VA +R M K +KK+PGY+ +EV+ ++ F D SH + +I +LK L
Sbjct: 419 GRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSL 474
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 184/364 (50%), Gaps = 12/364 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ + D+V+A LF ++ R +++ +I + + + ++I+ +P
Sbjct: 40 KLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKP 99
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ + +KAC M L MG I ++ G D FV S+++++Y KCG ++ A F
Sbjct: 100 DNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLF 159
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +KDLV + MI G G+P E+ + +M+++G D+V M+ ++ ACA LG
Sbjct: 160 DRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMN 219
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
VH Y R +LDV++ T+++DMYAK G +D + +F M + N+++W A+I +
Sbjct: 220 KARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYG 279
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-----GYTVRRFD 309
+G LEL M + G P+ ++ +S L AC+ G + G + Y VR
Sbjct: 280 YHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRP-- 337
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGH---GEEALSL 365
++ T ++D+ + G A L + M+ +D W + + IH E+A L
Sbjct: 338 -DVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKL 396
Query: 366 FLQM 369
L +
Sbjct: 397 LLSL 400
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 324/571 (56%), Gaps = 20/571 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
V I +Y + A+K+F+ R + +N++I A+ + E + L+ Q ++ ED
Sbjct: 226 VSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESED 285
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D T A+ A L ++ E++ ++ V V ++++ +Y +C ++ +
Sbjct: 286 AAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSF 345
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ M KD+V W++MI+ V NG EA+ + MKK+ + D V + L+ A +DL
Sbjct: 346 KIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLR 405
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMS-RINIVTWGAL 249
+ G HGY +R + + + + L+DMYAK+G ++ A +VF K+ S + TW ++
Sbjct: 406 NPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSM 464
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
+SG+ QNGL +L +M P+ V+L S L AC G++ GK +HG+++R
Sbjct: 465 MSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDL 524
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D N+ + T++IDMYSK G + A +F + + +++++ +I YG HG GE AL +F +
Sbjct: 525 DQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHR 584
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M ++ ++PD T ++LSA S++GLV+EG F+ M + Y IQP+ +H+ C+ D+L RAG
Sbjct: 585 MQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAG 644
Query: 429 EVEEALKIVDSMSTEPG-LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGIHAL 485
V++A + V + + + +W +LL+ C HK+F +G+ VAKK+L++ + G H L
Sbjct: 645 RVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVL 704
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN +A E+ WE V VRK MR+ G+KK G S +E+ G ++ F +D+ H Q + I +
Sbjct: 705 LSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSM 764
Query: 546 LKKLYLEMRAISSWLQGHMEEHEEHDPLSTA 576
L++L +EM+ H + PLST+
Sbjct: 765 LEELLMEMK------------HAGYRPLSTS 783
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 223/448 (49%), Gaps = 24/448 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DVRPDSSTFTVALKAC 86
AR+LF+ LP +N+III P E L Y+ M V+ DS T++ LKAC
Sbjct: 23 ARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKAC 82
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC------GKM-------NEAMVA 133
+L +G+ + + V +S+LN+Y C GKM +
Sbjct: 83 ADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKV 142
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M+++ +V W+++I V + EAV + M K GI V + + A + LGD
Sbjct: 143 FDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDF 202
Query: 194 RFGLSVHGYSIR---RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ VHG ++ ++N D+ V +S + MYA+ G L+ A VF N N W +I
Sbjct: 203 KNANVVHGMLVKLGSEYVN-DLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMI 261
Query: 251 SGFAQNGLAGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
S F QN + ++L + ++S D V+L+SA+ A + + +L + +H + ++
Sbjct: 262 SAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVA 321
Query: 310 FNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
V + ++I MYS+C + +FD M +D++SWN +I+++ +G +EAL LF +
Sbjct: 322 VTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYE 381
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M + + D T +LLSA S + G+ ++ + IQ E + ++D+ A++G
Sbjct: 382 MKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL-RNGIQ-FEGMDSYLIDMYAKSG 439
Query: 429 EVEEALKIVD-SMSTEPGLAVWVALLSG 455
+E A + + S S E A W +++SG
Sbjct: 440 LIEAAQNVFEKSFSHERDQATWNSMMSG 467
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 154/350 (44%), Gaps = 21/350 (6%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG--IDADEVVMMG 182
G+++ A F+ + R V W+++I GLV N P EA+ Y MK + D
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT-------------GHLD 229
+++ACAD + G +VH + +R +N V SL++MY+ D
Sbjct: 78 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
L VF M + +V W LI+ + + ++ M G +P VS V+ A +
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197
Query: 290 QIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
+G K +HG V+ + +L + +S I MY++ G A+ +FD R+ W
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
N +I+++ + E + LF Q +E+ D T S +SA SH E ++
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ A ++ + +R ++ + KI D+M E + W ++S
Sbjct: 318 KNVAVTQVCVMNA-LIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISA 365
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 325/569 (57%), Gaps = 14/569 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
V I +Y + A+K+F+ R + +N++I A+ + E + L+ Q ++ ED
Sbjct: 250 VSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESED 309
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D T A+ A L ++ E++ ++ V V ++++ +Y +C ++ +
Sbjct: 310 AAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSF 369
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ M KD+V W++MI+ V NG EA+ + MKK+ + D V + L+ A +DL
Sbjct: 370 KIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLR 429
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMS-RINIVTWGAL 249
+ G HGY +R + + + + L+DMYAK+G ++ A +VF K+ S + TW ++
Sbjct: 430 NPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSM 488
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
+SG+ QNGL +L +M P+ V+L S L AC G++ GK +HG+++R
Sbjct: 489 MSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDL 548
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D N+ + T++IDMYSK G + A +F + + +++++ +I YG HG GE AL +F +
Sbjct: 549 DQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHR 608
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M ++ ++PD T ++LSA S++GLV+EG F+ M + Y IQP+ +H+ C+ D+L RAG
Sbjct: 609 MQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAG 668
Query: 429 EVEEALKIVDSMSTEPG-LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGIHAL 485
V++A + V + + + +W +LL+ C HK+F +G+ VAKK+L++ + G H L
Sbjct: 669 RVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVL 728
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN +A E+ WE V VRK MR+ G+KK G S +E+ G ++ F +D+ H Q + I +
Sbjct: 729 LSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSM 788
Query: 546 LKKLYLEMRAI------SSWLQGHMEEHE 568
L++L +EM+ +S+L G +E E
Sbjct: 789 LEELLMEMKHAGYRPLSTSYLGGFLEPDE 817
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 223/448 (49%), Gaps = 24/448 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM--IKEDVRPDSSTFTVALKAC 86
AR+LF+ LP +N+III P E L Y+ M V+ DS T++ LKAC
Sbjct: 47 ARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKAC 106
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC------GKM-------NEAMVA 133
+L +G+ + + V +S+LN+Y C GKM +
Sbjct: 107 ADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKV 166
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M+++ +V W+++I V + EAV + M K GI V + + A + LGD
Sbjct: 167 FDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDF 226
Query: 194 RFGLSVHGYSIR---RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ VHG ++ ++N D+ V +S + MYA+ G L+ A VF N N W +I
Sbjct: 227 KNANVVHGMLVKLGSEYVN-DLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMI 285
Query: 251 SGFAQNGLAGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
S F QN + ++L + ++S D V+L+SA+ A + + +L + +H + ++
Sbjct: 286 SAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVA 345
Query: 310 FNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
V + ++I MYS+C + +FD M +D++SWN +I+++ +G +EAL LF +
Sbjct: 346 VTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYE 405
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M + + D T +LLSA S + G+ ++ + IQ E + ++D+ A++G
Sbjct: 406 MKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL-RNGIQ-FEGMDSYLIDMYAKSG 463
Query: 429 EVEEALKIVD-SMSTEPGLAVWVALLSG 455
+E A + + S S E A W +++SG
Sbjct: 464 LIEAAQNVFEKSFSHERDQATWNSMMSG 491
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 154/350 (44%), Gaps = 21/350 (6%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG--IDADEVVMMG 182
G+++ A F+ + R V W+++I GLV N P EA+ Y MK + D
Sbjct: 42 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT-------------GHLD 229
+++ACAD + G +VH + +R +N V SL++MY+ D
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 161
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
L VF M + +V W LI+ + + ++ M G +P VS V+ A +
Sbjct: 162 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 221
Query: 290 QIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
+G K +HG V+ + +L + +S I MY++ G A+ +FD R+ W
Sbjct: 222 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 281
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
N +I+++ + E + LF Q +E+ D T S +SA SH E ++
Sbjct: 282 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 341
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ A ++ + +R ++ + KI D+M E + W ++S
Sbjct: 342 KNVAVTQVCVMNA-LIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISA 389
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 290/548 (52%), Gaps = 34/548 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +FE + + +N++ ++ L LY MI + P+S +F LK+C
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM--------------------- 127
L G++I ++LGY D++V +S++++Y + G++
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 128 ----------NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
N A F+++ KD+V W++MI+G V +EA++ YK M K + DE
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
M+ ++ ACA G G +H + ++K+ L+D+Y+K G ++ A +F+
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+++ ++++W LI G L L L EM G P+ V+++S L ACA +G + +G
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317
Query: 298 KSIHGYTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+ IH Y +R L TS+IDMY+KCG A+ +FD M +R L SWN +I +
Sbjct: 318 RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFA 377
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG A LF +M + + PD TF LLSA SHSG+++ GR+ F M YKI P
Sbjct: 378 MHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKL 437
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY CM+DLL G +EA +++ +M EP +W +LL C H +GE A+ ++K
Sbjct: 438 EHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIK 497
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+ P++ G + L+SN +A +W++VA +R + G+KK PG S +E++ +H FI+ DK
Sbjct: 498 IEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDK 557
Query: 535 SHNQYEDI 542
H + +I
Sbjct: 558 FHPRNREI 565
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 212/427 (49%), Gaps = 44/427 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + I +ARKLF+E+ ++ V ++N++I Y + E L LY M+K +V+PD
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST + AC +++G ++ + G+G+++ + + +++LY KCG++ A F+
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +KD++ W+++I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 257 GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 316
Query: 196 GLSVHGYSIRRHLNLD--VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y +R + + TSL+DMYAK G ++ A VF +M ++ +W A+I GF
Sbjct: 317 GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
A +G A + +L +M+ G +PD ++ V L AC+ G L LG+ I + +
Sbjct: 377 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK 436
Query: 314 LG--TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +ID+ CG LF + + +MI
Sbjct: 437 LEHYGCMIDLLGHCG-------LFKEAK----------------------------EMIR 461
Query: 372 TM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGE 429
TM ++PD + SLL A VE G + ++ KI+P Y + ++ A AG
Sbjct: 462 TMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLI---KIEPENPGSYVLLSNIYATAGR 518
Query: 430 VEEALKI 436
++ KI
Sbjct: 519 WDQVAKI 525
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 197/397 (49%), Gaps = 38/397 (9%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++ A+ FE +Q +L+ W++M G N A+ Y M G+ + L+++
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA G +HG+ ++ +LD+ V TSL+ MYA+ G L+ A VF S ++V++
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 247 GALISGFAQNGLAGSTLELLMEM----------------QSCGF---------------E 275
ALI+G+A G + +L E+ ++C F +
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
PD ++V+ + ACAQ G ++LG+ +H + F N+ + +ID+YSKCG A L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F + +D+ISWN +I + +EAL LF +M+ + P+ T S+L A +H G +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314
Query: 395 EEGRYWFDLMVSKY--KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+ GR W + ++K + ++D+ A+ G++E A ++ DSM T L+ W A+
Sbjct: 315 DIGR-WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTR-SLSSWNAM 372
Query: 453 LSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ G H K + + K+ K ++PDD+ L+S
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 45/294 (15%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY ++ +A LF+ L + V ++N++I ++ E L L+ +M++
Sbjct: 235 VNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE 294
Query: 73 RPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
P+ T L AC L + +G ++ G N + +S++++Y KCG + A
Sbjct: 295 SPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAA 354
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ M + L W++MI G +G+ A D + +M+K GID D++ +GL+ AC
Sbjct: 355 KQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSAC--- 411
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT----- 245
+ +G LDL H+F++MS+ +T
Sbjct: 412 --------------------------------SHSGMLDLGRHIFRSMSQDYKITPKLEH 439
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+G +I GL E++ M EPD V S L AC ++LG+S
Sbjct: 440 YGCMIDLLGHCGLFKEAKEMIRTMP---MEPDGVIWCSLLKACKMHNNVELGES 490
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 313/551 (56%), Gaps = 14/551 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-ED 71
V I++Y + RK+F+ + + +N++I + + S E + L+ Q +K E
Sbjct: 140 VSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEH 199
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D TF AL A L L +G+++ ++ V V +++L +Y +C + +
Sbjct: 200 TILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSF 259
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FEKM KD+V W++MI+G + NG E + M+K+G AD V + L+ A ++L
Sbjct: 260 EVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLR 319
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGAL 249
+ G H Y IR + D + + L+DMYAK+G + ++ VF+N + + TW A+
Sbjct: 320 NREIGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAV 378
Query: 250 ISGFAQNGL---AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
I+G+ QNGL A T L++E P++V+L S L AC+ +G + LGK +HG ++R
Sbjct: 379 IAGYTQNGLVEQAFITFRLMLEQN---LRPNAVTLASILPACSSLGSINLGKQLHGVSIR 435
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D N+ + T+++DMYSK G + A ++F Q R+ +++ +I YG HG GE ALSL
Sbjct: 436 YSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSL 495
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F M ++ ++PD TF ++LSA S++GLV+EG F+ M +KIQP+ HY C+ D+L
Sbjct: 496 FHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLG 555
Query: 426 RAGEVEEALKIVDSMSTEPG-LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGI 482
R G V EA + V + E + +W +LL C H +GE+V+ ++L++N D G
Sbjct: 556 RVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAGY 615
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
L+SN +A E WE V +RK+MR+ G++K G S ++ G L F+ +DK H + E+I
Sbjct: 616 QVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWIDTGGLLVRFVSKDKDHTRCEEI 675
Query: 543 VYVLKKLYLEM 553
+L++L +EM
Sbjct: 676 YEMLERLAMEM 686
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 237/470 (50%), Gaps = 21/470 (4%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLM 90
K+F+ + R V +N+++ Y + E E + + M+K ++P +F A S+
Sbjct: 55 KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114
Query: 91 DLKMGEEIWRKAVELG--YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
D K ++ ++LG Y ND+FV SS +++Y + G ++ F+ K W++M
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174
Query: 149 INGLVFNGQPREAVDAY-KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I G + N E V + + MK E D+V + + A + L G +H ++++ H
Sbjct: 175 IGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNH 234
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L V V +++ MY++ + + VF+ M ++V+W +ISGF QNGL L L+
Sbjct: 235 TVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVY 294
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSK 324
EMQ GF DSV++ S L A + + ++GK H Y +R +FD + + +IDMY+K
Sbjct: 295 EMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG---MDSYLIDMYAK 351
Query: 325 CGVPSCARALF--DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
G+ ++ +F + +Q+RD +WN +IA Y +G E+A F M+E ++P+ T A
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLA 411
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S+L A S G + G+ + + +Y + +VD+ +++G + A + V + S+
Sbjct: 412 SILPACSSLGSINLGKQLHGVSI-RYSLDQNIFVRTALVDMYSKSGAINYA-ESVFTQSS 469
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKV-----AKKVLKLNPDDLGIHALVS 487
E + ++ G H +GE + K + PD + A++S
Sbjct: 470 ERNSVTYTTMILGYGQH---GMGENALSLFHSMKKSGIQPDAITFVAVLS 516
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
L VFK M + +++ W ++S + + + M G +P VS V+ A +
Sbjct: 52 LLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAIS 111
Query: 290 QIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
+G K ++G ++ + +L + +S I MY++ G R +FD + W
Sbjct: 112 SVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVW 171
Query: 347 NVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
N +I + + E + LFLQ ++T D TF S L+A+S + G+ +
Sbjct: 172 NTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTM 231
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + A +V + +R V+ + ++ + M E + W ++SG
Sbjct: 232 KNHTVLSVTVLNAILV-MYSRCNSVQTSFEVFEKMP-EKDVVSWNTMISG 279
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 300/537 (55%), Gaps = 13/537 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+LY A K+FEE+P R + ++NS+I Y F L L+ +M+K +PD
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 76 SSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ AL AC + KMG+EI R +E G DV V +S+L++Y K G+++ A
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG---DVMVMTSILDMYSKYGEVSYAE 287
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
F M ++++V W+ MI NG+ +A +++M ++ G+ D + + L+ A A L
Sbjct: 288 RIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G ++HGY++RR + ++T+L+DMY + G L A +F M+ N+++W ++I
Sbjct: 348 E----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
+ + QNG S LEL E+ PDS ++ S L A A+ L G+ IH Y V+ R+
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N ++ S++ MY+ CG AR F+ + +D++SWN II +Y +HG G ++ LF +M
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
I + V P+ STFASLL+A S SG+V+EG +F+ M +Y I P +HY CM+DL+ R G
Sbjct: 524 IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGN 583
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
A + ++ M P +W +LL+ NHK +I E A+++ K+ D+ G + L+ N
Sbjct: 584 FSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNM 643
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+A +WE+V ++ M G+ + S VE G+ H F D+SH I VL
Sbjct: 644 YAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 228/413 (55%), Gaps = 8/413 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+E+ +N +I ++ E + Y++M+ V+ D+ T+ +K+
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L+ G++I ++LG+ +DV+V +S+++LY+K G +A FE+M +D+V W+SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G + G ++ +K M K G D M + AC+ + + G +H +++R +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 209 NL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
DV V TS++DMY+K G + A +F M + NIV W +I +A+NG
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 268 EM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+M + G +PD ++ ++ L A A + G++IHGY +RR F ++VL T++IDMY +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +FD+M +++ISWN IIA+Y +G AL LF ++ ++ + PD +T AS+L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
A + S + EGR +V K + +V + A G++E+A K +
Sbjct: 439 PAYAESLSLSEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 177/345 (51%), Gaps = 18/345 (5%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M +A+ F++M + D W+ MI G G EAV Y RM G+ AD +I++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
A + G +H I+ DV V SL+ +Y K G A VF+ M +IV+W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++ISG+ G S+L L EM CGF+PD S +SAL AC+ + K+GK IH + VR
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 307 -RFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R + ++++ TS++DMYSK G S A +F+ M R++++WNV+I Y +G +A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 365 LFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ----PTEKHYAC 419
F +M E ++PD T +LL A + EGR + Y ++ P
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPA----SAILEGR-----TIHGYAMRRGFLPHMVLETA 370
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKFS 463
++D+ G+++ A I D M+ E + W ++++ N K +S
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYS 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 5/238 (2%)
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
+A + ++ A +F M++ + W +I GF GL ++ M G + D+ +
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ + A I L+ GK IH ++ F ++ + S+I +Y K G A +F++M
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RD++SWN +I+ Y G G +L LF +M++ KPD + S L A SH + G+
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE- 252
Query: 401 FDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ +I+ + ++D+ ++ GEV A +I + M + + W ++ GC+
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI-GCY 308
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 302/544 (55%), Gaps = 10/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-RP 74
+I++Y I A +F + + + ++ S+I +++ E L L+ M ++ V +P
Sbjct: 222 LISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQP 281
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F AC SL+ + G +I + G G +VF G S+ ++Y K G + A AF
Sbjct: 282 NEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAF 341
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+++I L N EA+ + +M G+ D++ + L+ AC
Sbjct: 342 YQIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLN 400
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGF 253
G+ +H Y I+ L+ V SL+ MY K +L A +VFK++S N+V+W A++S
Sbjct: 401 QGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSAC 460
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+Q+ G L M +PD++++ + L CA++ L++G +H ++V+ LV
Sbjct: 461 SQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKS---GLV 517
Query: 314 LGTSV----IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ SV IDMY+KCG+ AR +FD Q+ D++SW+ +I Y G G+EAL+LF M
Sbjct: 518 VDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMM 577
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
V+P+ T+ +LSA SH GLVEEG + ++ M + I PT +H +CMVDLLARAG
Sbjct: 578 RNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGC 637
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ EA + +P + +W LL+ C H I E+ A+ +LKL+P + L+SN
Sbjct: 638 LYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNI 697
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A W+EVA +R M++ G++KVPG S +EV ++H F ED SH Q +I +L+ L
Sbjct: 698 HASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDL 757
Query: 550 YLEM 553
+L+M
Sbjct: 758 WLQM 761
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 226/452 (50%), Gaps = 17/452 (3%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
NS I +++ E L +N +K ++ + ST+ + AC ++ LK G+ I +
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ D+ + + +LN+Y KCG + +A AF+ MQ + +V W+ MI+G NGQ +A+
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y +M + G D++ +I+AC GD G +HG+ I+ + + Q +L+ MY
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLV 282
K G + AS VF +S ++++W ++I+GF Q G L L +M G ++P+
Sbjct: 228 KFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFG 287
Query: 283 SALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG-VPSCARALFDQMQS 340
S AC + + G+ I G + N+ G S+ DMY+K G +PS RA + Q++S
Sbjct: 288 SVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFY-QIES 346
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
DL+SWN IIA+ + EA+ F QMI + PD TF +LL A + +G
Sbjct: 347 PDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQG--- 402
Query: 401 FDLMVSKYKIQPTEKHYACMVDLL----ARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+ + Y I+ A + + L + + +A + +S L W A+LS C
Sbjct: 403 --MQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSAC 460
Query: 457 HNHKKFSIGEKVAKKVL--KLNPDDLGIHALV 486
HK+ ++ K +L + PD++ I ++
Sbjct: 461 SQHKQPGEAFRLFKLMLFSENKPDNITITTIL 492
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 304/570 (53%), Gaps = 42/570 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A Y + A +LFE +P R V ++N ++ A S+ E L + M VR D
Sbjct: 234 MLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLD 293
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T+T +L AC L L G+++ + + D +V S+M+ LY KCG EA F
Sbjct: 294 STTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFS 353
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W+ +I G + G E+++ + +M+ E + D+ + +I C++ D
Sbjct: 354 SLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCL 413
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H S++ V + SL+ MYAK G+L A +F +M +IV+W +++ ++Q
Sbjct: 414 ARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQ 473
Query: 256 NGLAGSTLELLMEMQS---------------CGFEPDSVSLVSALL-------------- 286
G G E M + G E D + + SA+L
Sbjct: 474 VGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVT 533
Query: 287 ---ACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQ 339
CA +G KLG I G+TV+ L+L TS VI MYSKCG S AR +FD +
Sbjct: 534 LFRGCADMGANKLGDQITGHTVK---VGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+DL+SWN +I Y HG G++A+ +F M++ KPD+ ++ ++LS+ SHSGLV+EG++
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKF 650
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+FD++ + + P +H++CMVDLLARAG + EA ++D M +P VW ALLS C H
Sbjct: 651 YFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTH 710
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
+ E AK + L+ D G + L++ +A K + A VRK MR G+KK PGYS
Sbjct: 711 GNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSW 770
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+EV ++H F ED SH Q ++ + +KL
Sbjct: 771 MEVKNKVHVFKAEDVSHPQ---VIAIREKL 797
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 237/538 (44%), Gaps = 73/538 (13%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y + A +LF +P R V ++N+++ Y + + + + M + D P++ T
Sbjct: 105 YAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFT 164
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK------------ 126
F A+K+C +L ++ ++ + G+ D V + +++++V+CG
Sbjct: 165 FGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224
Query: 127 -------------------MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
++ A+ FE M +D+V W+ M++ L +G+ REA+
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M G+ D + ACA L +G +H IR +D V +++V++YAK G
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A VF ++ N V+W LI GF Q G +LEL +M++ D +L + +
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC---------------- 330
C+ + L + +H +++ +V+ S+I MY+KCG
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 331 ---------------ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
AR FD M +R++I+WN ++ +Y HG E+ L ++ M+ E V
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T+ +L + G + G V I T A ++ + ++ G + EA
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNA-VITMYSKCGRISEAR 583
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
KI D +S + L W A+++G H + I + + KK K PD + A++S+
Sbjct: 584 KIFDFLSRKD-LVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAK--PDYISYVAVLSS 638
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 179/379 (47%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + M+N Y K G +++A F +M R+D+ W+++++G +G+ +A++++ M+
Sbjct: 94 NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153
Query: 170 KEGIDADEVVMMGL-IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G G +++C LG L + G + D V T +VDM+ + G +
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213
Query: 229 DLAS-------------------------------HVFKNMSRINIVTWGALISGFAQNG 257
D AS +F++M ++V+W ++S +Q+G
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGT 316
A L + ++M + G DS + S+L ACA++ L GK +H +R + + +
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++++Y+KCG AR +F ++ R+ +SW V+I + +G E+L LF QM ++
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTV 393
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+++S S+ + R L + + + ++ + A+ G ++ A I
Sbjct: 394 DQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNS-LISMYAKCGNLQNAESI 452
Query: 437 VDSMSTEPGLAVWVALLSG 455
SM E + W +L+
Sbjct: 453 FSSME-ERDIVSWTGMLTA 470
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 290/531 (54%), Gaps = 6/531 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL--YNQMIKEDVRPDSSTFTVALKAC 86
AR+L +L + ++S+I +S + L Y M + V P TF LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L D + V+ G +D FV +S+++ Y G + A F+ + KD+V W+
Sbjct: 115 FKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G V NG EA+ + MKK G+ A+E+ ++ +++A + D RFG SVHG +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 207 -HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ DV + +SLVDMY K D A VF M N+VTW ALI+G+ Q+ + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EM P+ +L S L ACA +G L G+ +H Y ++ + N GT++ID+Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F+++ +++ +W +I + HG+ +A LF M+ + V P+ TF ++
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA +H GLVEEGR F M ++ ++ HYACMVDL R G +EEA +++ M EP
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW AL C HK + +G+ A +V+KL P G + L++N ++ Q W+EVA VRK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVYVLKKLYLEMR 554
M+ + K PG+S +EV G+L FI +DK + +D+ L + ++MR
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 125/240 (52%), Gaps = 8/240 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + A+K+F+E+P R V T+ ++I Y + + + ++ +M+K DV P+
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC + L G + ++ + G+++++LYVKCG + EA++ FE
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG---- 191
++ K++ W++MING +G R+A D + M + +EV M ++ ACA G
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
R LS+ G R ++ L +VD++ + G L+ A + + M V WGAL
Sbjct: 426 GRRLFLSMKG---RFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 313/542 (57%), Gaps = 16/542 (2%)
Query: 9 YGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
+GN+ ++ +Y I +A KLF+E+ R + ++ SII Y ES L+N+M
Sbjct: 187 FGNT---MLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKM- 242
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
+ ++ P+S T V L+AC + + G E+ ++ G+ D V +S+L +Y K G
Sbjct: 243 RMEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSG 302
Query: 129 EAM-VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE--VVMMGLIQ 185
E + F +++ +D++ W+ +I F G E + + M++E + E +++ I
Sbjct: 303 EEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAIA 362
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
CA+L + G +H +I+ L+ D + T L+ +YAK G L++++ +F+++ N +T
Sbjct: 363 NCANLSE---GGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQLFRDIPHRNSIT 418
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +++SGF QNG +EL +M + G +P+ + + ++A +G L+LGK+ H + +
Sbjct: 419 WSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFI 478
Query: 306 RRF-----DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
R + + L TS+++MY +CG S A F+++ +D+++W +I +G HG
Sbjct: 479 RNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAF 538
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL F M+E+ V+P+ TF SLLSA SHSGLV EG F M ++I+P HY CM
Sbjct: 539 EALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCM 598
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL R+G+++EAL ++ + T P +W ALL+ H+ +GE A+K+L+L PD++
Sbjct: 599 VDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLELEPDNV 658
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYE 540
G + L SN A ++W EV VR+ M + +KK PG+S +EV G +H F+ D SH+Q E
Sbjct: 659 GYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDTSHHQVE 718
Query: 541 DI 542
+I
Sbjct: 719 EI 720
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 238/482 (49%), Gaps = 14/482 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I LY ND SA + +NSII ++ L Y +M + V
Sbjct: 88 KLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAH 147
Query: 75 DSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
DS TF + +A SL ++ GE + A+++G+G DV+ G++ML +YVKCG + A
Sbjct: 148 DSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKL 207
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M +DLV W+S+I+G ++ + +M+ E ++ + V M+ ++QAC+
Sbjct: 208 FDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRME-MEPNSVTMVVMLQACSAFESV 266
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT-GHLDLASHVFKNMSRINIVTWGALISG 252
G +H Y I++ +D VQ S++ MY KT G + F + +I++W LI+
Sbjct: 267 NEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAF 326
Query: 253 FAQNGLAGSTLELLMEM-QSCGFEPDSVSL-VSALLACAQIGFLKLGKSIHGYTVRRFDF 310
++ G E EM + +S++L VSA+ CA L G +H ++
Sbjct: 327 YSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAIANCAN---LSEGGMLHCSAIKTGLH 383
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ VL T ++ +Y+KCG + LF + R+ I+W+ +++ + +G +EA+ L+ QM+
Sbjct: 384 DTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQML 443
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY---ACMVDLLARA 427
+ ++P+H ++L+ A +H G ++ G+ + P E ++++ R
Sbjct: 444 ASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRC 503
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHAL 485
G + AL + + + + W +++ G H K K +L ++ P+ + +L
Sbjct: 504 GSISSALICFNRVVVKD-VVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSL 562
Query: 486 VS 487
+S
Sbjct: 563 LS 564
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 178/380 (46%), Gaps = 12/380 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
V S ++ LY + A + + V W+S+I V +G A+ Y RM++ G
Sbjct: 85 VASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELG 144
Query: 173 IDADEVVMMGLIQACADLG-DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
+ D + QA LG +G +VH +++ DV +++++Y K G + A
Sbjct: 145 VAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNA 204
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
S +F M+ ++V+W ++ISG+ +L +M+ EP+SV++V L AC+
Sbjct: 205 SKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRM-EMEPNSVTMVVMLQACSAF 263
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC-GVPSCARALFDQMQSRDLISWNVI 349
+ G+ +H Y +++ F + + S++ MY+K G F +++ RD+ISWN++
Sbjct: 264 ESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNIL 323
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
IA Y G E F +M V + ++SA+++ + EG L S K
Sbjct: 324 IAFYSFRGDIAEVAERFNEM-RREVTSSIESLTLVVSAIANCANLSEGGM---LHCSAIK 379
Query: 410 IQPTEK-HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ C++ L A+ G +E + ++ + + W +++SG + F ++
Sbjct: 380 TGLHDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSIT-WSSMMSGFTQNGFFKEAIEL 438
Query: 469 AKKVLK--LNPDDLGIHALV 486
+++L L P+ I LV
Sbjct: 439 YQQMLASGLQPNHDIISTLV 458
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 303/536 (56%), Gaps = 5/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LY + AR++F+E+ R + +++++I Y + P LGL++++ ++ P+
Sbjct: 44 ILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPN 100
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + AC SL L G++I +A++ G + FV ++++ +Y+KCGK ++A++A+
Sbjct: 101 EYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYN 160
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + V ++++I G V N QP + + + M ++G D +GL+ C D +
Sbjct: 161 EALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKR 220
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+ LN + ++ MY+K L+ A F+++ ++++W IS +
Sbjct: 221 GELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSH 280
Query: 256 NGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
LE EM C PD + SAL AC+ + + GK IHG+ +R R ++
Sbjct: 281 CNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVG 340
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
G ++I+MY+KCG + A +F +M+ ++L+SWN +IA +G HG G +A LF +M
Sbjct: 341 AGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMG 400
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
VKPD TF LL+A +H+GLV+EG +F+ M Y I P +H++C++DLL RAG + EA
Sbjct: 401 VKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEA 460
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + V +LLS C H G+ A+++LKL P + L+SN +A +
Sbjct: 461 KEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASD 520
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ W+ VA K ++ SG+KK PG+S++EVNG F + D SH++ E+I+ +LK L
Sbjct: 521 EMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKIL 576
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 197/408 (48%), Gaps = 13/408 (3%)
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C L+ G + A++ +DV V + +LNLY KC K+ EA F++M ++LV W
Sbjct: 13 CSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSW 72
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S+MI+G G+P A+ + ++ I +E V +I ACA L G +HG +++
Sbjct: 73 SAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQALK 129
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L+ V +L+ MY K G A + +N V + ALI+GF +N E+
Sbjct: 130 FGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEV 189
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSK 324
L M GF PD + V L C LK G+ +H T++ + + +G +I MYSK
Sbjct: 190 LRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSK 249
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFAS 383
+ A F ++ +DLISWN I+S E+AL F +M+ E V+PD TFAS
Sbjct: 250 LNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFAS 309
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
L+A S + G+ ++ Q A ++++ A+ G + +A I M +
Sbjct: 310 ALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNA-LINMYAKCGCIAKAYYIFSKMEHQ 368
Query: 444 PGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALVS 487
L W +++G NH K F + K+ K + + PD + L++
Sbjct: 369 -NLVSWNTMIAGFGNHGFGGKAFELFAKM--KTMGVKPDSVTFVGLLT 413
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 11/303 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
LI C+ R GL +H +I+ DV V ++++YAK L A VF MS N
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W A+ISG+ Q G S L L ++ P+ S + ACA + L GK IHG
Sbjct: 69 LVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHG 125
Query: 303 YTVRRFDFNLV--LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
+ +F + V + ++I MY KCG S A +++ + +++N +I + + +
Sbjct: 126 QAL-KFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPD 184
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ + M + PD TF LL + ++ G K K+ T +
Sbjct: 185 KGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGEL-LHCQTIKLKLNSTAFIGNLI 243
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG---CHNHKKFSIGEKVAKKVLKLNP 477
+ + ++ +EEA K S+ E L W +S C++H+K K ++ P
Sbjct: 244 ITMYSKLNLLEEAEKAFRSIE-EKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRP 302
Query: 478 DDL 480
D+
Sbjct: 303 DEF 305
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 307/579 (53%), Gaps = 5/579 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K +S + G ++ LY DI +A +F V +N +++AY + +
Sbjct: 271 LLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKS 330
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ QM + P+ T+ L+ C +++GE+I +++ G+ +D++V ++++
Sbjct: 331 FEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K +++A E ++++D+V W+SMI G V + EA+ +K M+ G+ D + +
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
ACA + R GL +H D+ + +LV++YA+ G + A +F+ +
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDH 510
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ +TW LISGF Q+ L L + M+M G + + + +SA+ A A + +K GK +
Sbjct: 511 KDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQV 570
Query: 301 HGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG V+ + + ++I +Y KCG A+ +F +M R+ +SWN II S HG G
Sbjct: 571 HGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG 630
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EAL LF QM + +KP+ TF +L+A SH GLVEEG +F M + Y + P HYAC
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VD+L RAG+++ A + VD M +W LLS C HK IGE AK +L+L P D
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHD 750
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN +A+ KW VRK M+ G++K PG S +EV +HAF + D+ H
Sbjct: 751 SASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLS 810
Query: 540 EDIVYVLKKLYLEMRAISSWLQG----HMEEHEEHDPLS 574
+ I L +L + I + H +E E+ DP +
Sbjct: 811 DQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTA 849
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 214/446 (47%), Gaps = 13/446 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+EL R ++ +++ Y+++ E LY+QM V P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT 143
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC G I + + + ++ FVG++++ LY+ G A F
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M D V ++++I+G G A+ + M+ G+ D V + L+ ACA +GD +
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y ++ ++ D + SL+D+Y K G ++ A +F R N+V W ++ + Q
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ E+ +MQ+ G P+ + L C G ++LG+ IH +++ F+ ++ +
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK AR + + ++ RD++SW +IA Y H EEAL+ F +M + V
Sbjct: 384 SGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 375 KPDHSTFASLLSALS-----HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
PD+ AS SA + GL R + + I T +V+L AR G
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT------LVNLYARCGR 497
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
EEA + + + + W L+SG
Sbjct: 498 SEEAFSLFREIDHKDEI-TWNGLISG 522
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 208/437 (47%), Gaps = 6/437 (1%)
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFV 113
++P ++L L S+ T AL+AC + + EI +V G G D +
Sbjct: 21 DNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLI 80
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
G+ +++LY K G + +A F+++ +D V W +M++G G +EA Y +M +
Sbjct: 81 GNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAV 140
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
V+ ++ AC G +H ++ + V +L+ +Y G LA
Sbjct: 141 IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF +M + VT+ LISG AQ G L++ EMQ G PD V++ S L ACA +G
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+ GK +H Y ++ F+ + S++D+Y KCG A +F+ +++ WN+++ +
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
YG ++ +F QM T + P+ T+ +L + +G +E G L + K +
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI-KNGFES 379
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
++D+ ++ +++A KI++ M + + W ++++G H K++
Sbjct: 380 DMYVSGVLIDMYSKYRCLDKARKILE-MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 473 LKLN--PDDLGIHALVS 487
PD++G+ + S
Sbjct: 439 QDCGVWPDNIGLASAAS 455
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 299/545 (54%), Gaps = 9/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK---EDV 72
+I +Y D+ ARK F+E+ + + T+N++I YSR L +Y M+ E +
Sbjct: 100 LITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGM 159
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ TF+ AL AC + D+ G EI + V GY +D V ++++N+Y KCG + A
Sbjct: 160 KPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARK 219
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++++ +D++ W++MI+G G +A++ ++RM + V +GL+ AC +L D
Sbjct: 220 VFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLED 279
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK-TGHLDLASHVFKNMSRINIVTWGALIS 251
G ++H D+ + L++MY K + L+ A VF+ + +++TW LI
Sbjct: 280 LEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIV 339
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+ Q G A L++ +MQ P+ ++L + L ACA +G + GK++H R
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++VL S+++MY++CG +F ++ + L+SW+ +IA+Y HGH L F +++
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + D T S LSA SH G+++EG F MV + + P +H+ CMVDLL+RAG +
Sbjct: 460 QEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRL 519
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL-NPDDLGIHALVSNF 489
E A ++ M P W +LLSGC H +VA K+ +L + D+ L+SN
Sbjct: 520 EAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNV 579
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +W++ VRKT + +K PG S +E+N +H F+ DKSH + E I +K+L
Sbjct: 580 YAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRL 636
Query: 550 YLEMR 554
+M+
Sbjct: 637 SKQMK 641
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 234/453 (51%), Gaps = 8/453 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+YG + A +F + ++ I+ A++R E LG Y +M+ E +RPD +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
F VA+ C S DLK G+ + +E D+ +G++++ +Y +C + A F++M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRM---KKEGIDADEVVMMGLIQACADLGDSR 194
+K LV W+++I G NG R A+ Y+ M EG+ D + + AC+ +GD
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G + ++ D VQ +L++MY+K G L+ A VF + +++ W +ISG+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+ G A LEL M +P+ V+ + L AC + L+ G++IH ++ +LV
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 314 LGTSVIDMYSKCGVP-SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G +++MY+KC AR +F+++++RD+I+WN++I +Y +G ++AL +F QM
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V P+ T +++LSA + G +G+ L+ S + + ++++ R G +++
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASG-RCKADVVLENSLMNMYNRCGSLDD 419
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ + ++ + L W L++ H G
Sbjct: 420 TVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY KCG + A A+F ++ + +SW +I+A++ +GH EAL + +M+ ++PD +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
F + S S +++G+ +++ ++ ++ + AR ++E A K D M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ L W AL++G + K+ + ++ +P+ + A+
Sbjct: 121 GKKT-LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAIT 165
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 296/555 (53%), Gaps = 4/555 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT A+ ++ +Y + + SA+ + E P R V T+ ++I + L
Sbjct: 36 LKTPFPAF--LYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSAL 93
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ M+ + VRP+ TF LKA L G+++ AV+ G NDVFVG S+ ++Y
Sbjct: 94 LHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMY 153
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G +N+A F++M ++L W++ I+ V +G+P ++V A+ + + G D +
Sbjct: 154 SKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFC 213
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+ AC+D G +HG+ IR +V V L+D Y K G ++ + VF M
Sbjct: 214 AFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGER 273
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N V+W +LI+ + QN L + + EP + S L ACA + ++ G+S+
Sbjct: 274 NSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQ 333
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
V+ + N+ + ++++DMY KCG A F+ M R+L+SWN ++ Y GH
Sbjct: 334 ALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHAN 393
Query: 361 EALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+A++L +M + P + + LSA S +G ++ G F+ M +Y ++P +HYAC
Sbjct: 394 KAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYAC 453
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL RAG VE A + M P +++W ALL C H K +G+ A+K+ +L+P D
Sbjct: 454 LVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKD 513
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G H ++SN FA +WEEV VR M++ G+KK G+S + V+ +H F +DKSH +
Sbjct: 514 SGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKD 573
Query: 540 EDIVYVLKKLYLEMR 554
+I +L KL EM+
Sbjct: 574 PEIQDILGKLRKEMQ 588
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 296 LGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LG++ H ++ + F L +++MY+K + A+ + + R +++W +IA
Sbjct: 24 LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGS 83
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G AL F M+ V+P+ TF +L A + + G+ L V + I
Sbjct: 84 VQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIN-- 141
Query: 414 EKHYACMV-DLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ C V D+ ++ G + +A K+ D M L W A +S
Sbjct: 142 DVFVGCSVFDMYSKLGFLNDAYKVFDEMPHR-NLETWNAYIS 182
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 319/556 (57%), Gaps = 16/556 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KED 71
V I++Y DI S+R++F+ R ++ +N++I Y + + E + L+ + I ++
Sbjct: 254 VSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKE 313
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ D T+ +A A +L +++G + + + EL + + +S++ +Y +CG +
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL----PIVIVNSLMVMYSRCGSV 369
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+++ F M+ +D+V W++MI+ V NG E + M+K+G D + + L+ A
Sbjct: 370 HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAA 429
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVT 245
++L + G H + IR+ + + + + L+DMY+K+G + ++ +F+ + + T
Sbjct: 430 SNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQAT 488
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++ISG+ QNG T + +M P++V++ S L AC+QIG + LGK +HG+++
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 306 RRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R++ D N+ + ++++DMYSK G A +F Q + R+ +++ +I YG HG GE A+S
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LFL M E+ +KPD TF ++LSA S+SGL++EG F+ M Y IQP+ +HY C+ D+L
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 425 ARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLG 481
R G V EA + V + E +A +W +LL C H + + E V++++ K + + G
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSG 728
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
L+SN +A EQKW+ V VR+ MR+ G+KK G S +E+ G ++ F+ D+ H +
Sbjct: 729 YEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSE 788
Query: 542 IVYVLKKLYLEMRAIS 557
I V+ L +MR S
Sbjct: 789 IYDVIDGLAKDMRGDS 804
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 229/465 (49%), Gaps = 19/465 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VRPDSSTFTVALKAC 86
AR+LF+ +P +N+III + P E L Y++M K D+ T++ LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM------VAFEKMQRK 140
+LK G+ + + + V +S++N+YV C + F+ M+RK
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
++V W+++I+ V G+ EA + M + + V + + A + + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 201 GYSIR--RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
G ++ D+ V +S + MYA+ G ++ + VF + NI W +I + QN
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 259 AGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGT 316
++EL +E + S D V+ + A A + + ++LG+ HG+ + F + +V+
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S++ MYS+CG + +F M+ RD++SWN +I+++ +G +E L L +M + K
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D+ T +LLSA S+ E G+ ++ + IQ E + ++D+ +++G + + K+
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLI-RQGIQ-FEGMNSYLIDMYSKSGLIRISQKL 475
Query: 437 VD-SMSTEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVLKLN 476
+ S E A W +++SG H K F + K+ ++ ++ N
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 13/242 (5%)
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVS 280
+ G+ LA +F + + V W +I GF N L L M+ D+ +
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKC-GVPSC-----ARA 333
S L ACA+ LK GK++H + +R + + V+ S+++MY C P C R
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+FD M+ +++++WN +I+ Y G EA F M+ VKP +F ++ A+S S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
+++ ++ LM+ K + + + + + + A G++E + ++ DS E + VW
Sbjct: 230 IKKANVFYGLML-KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS-CVERNIEVWNT 287
Query: 452 LL 453
++
Sbjct: 288 MI 289
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 292/524 (55%), Gaps = 2/524 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LFEE+P + T+N++I Y + E + L+ +M + +P TF+ LKA V L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+G+++ +V G+ D VG+ +L+ Y K ++ E + F++M D V ++ +I+
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
Q ++ ++ M+ G D ++ A+L + G +H ++ +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V SLVDMYAK + A +FK++ + V+W ALISG+ Q GL G+ L+L +M+
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSC 330
D + + L A A L LGK +H + +R + N+ G+ ++DMY+KCG
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +F++M R+ +SWN +I+++ +G GE A+ F +MIE+ ++PD + +L+A SH
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G VE+G +F M Y I P +KHYACM+DLL R G EA K++D M EP +W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
++L+ C HK S+ E+ A+K+ + D + +SN +A +WE+V V+K MR+
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
G+KKVP YS VEVN ++H F D++H ++IV + +L E+
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 21/484 (4%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I+ + D+ SAR LF+ +P R V T+ ++ Y+R E L+ QM +
Sbjct: 81 STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 72 --VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF--VGSSMLNLYVKCGKM 127
PD TFT L C + ++ AV+LG+ + F V + +L Y + ++
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+ A V FE++ KD V ++++I G +G E++ + +M++ G + G+++A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L D G +H S+ + D V ++D Y+K + +F M ++ V++
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VR 306
+IS ++Q ++L EMQ GF+ + + L A + L++G+ +H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY---GIHGHGEEAL 363
D L +G S++DMY+KC + A +F + R +SW +I+ Y G+HG G L
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---L 437
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF +M + ++ D STFA++L A + + G+ ++ ++ +VD+
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDM 496
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK-----LNPD 478
A+ G +++A+++ + M ++ W AL+S H GE K L PD
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVS-WNALISA---HADNGDGEAAIGAFAKMIESGLQPD 552
Query: 479 DLGI 482
+ I
Sbjct: 553 SVSI 556
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 175/363 (48%), Gaps = 13/363 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ T S + +I+ Y + ++ R LF+E+P +YN +I +YS+ + L
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ +M + F L +L L+MG ++ +A+ + + VG+S++++Y
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC EA + F+ + ++ V W+++I+G V G + + +M+ + AD+
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+++A A G +H + IR +V + LVDMYAK G + A VF+ M
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG---- 297
N V+W ALIS A NG + + +M G +PDSVS++ L AC+ GF++ G
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 298 ---KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASY 353
I+G T ++ + +L D+ + G + A L D+M D I W+ ++ +
Sbjct: 577 QAMSPIYGITPKKKHYACML-----DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Query: 354 GIH 356
IH
Sbjct: 632 RIH 634
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N V ++I + K G S AR LFD M R +++W +++ Y + H +EA LF QM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 371 E--TMVKPDHSTFASLL 385
+ PDH TF +LL
Sbjct: 138 RSSSCTLPDHVTFTTLL 154
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 285/490 (58%), Gaps = 5/490 (1%)
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF 112
R++ P + + + M + V DS T++ +K C++ ++ G+ + R GY F
Sbjct: 263 RRDLP-SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTF 321
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ + ++N+YVK + EA V F+KM +++V W++MI+ A+ M ++G
Sbjct: 322 LTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDG 381
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ + +++AC L D + +H + ++ L DV V+++L+D+Y+K G L A
Sbjct: 382 VMPNMFTFSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEAL 438
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF+ M + V W ++I+ FAQ+ L L M+ GF D +L S L AC +
Sbjct: 439 KVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLS 498
Query: 293 FLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+LG+ H + V +FD +L+L +++DMY KCG A+ +F++M +D+ISW+ +IA
Sbjct: 499 LLELGRQAHVH-VLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAG 557
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+G EAL+LF M KP+H T +L A SH+GLV EG Y+F M + Y I P
Sbjct: 558 LAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDP 617
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+HY CM+DLL RA ++++ +K++ M+ EP + W LL C + + AK++
Sbjct: 618 GREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEI 677
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
LKL+P D G + L+SN +A+ ++W +VA VR+TM+K G++K PG S +EVN ++HAFI+
Sbjct: 678 LKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILG 737
Query: 533 DKSHNQYEDI 542
DKSH Q ++I
Sbjct: 738 DKSHPQIDEI 747
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 157/282 (55%), Gaps = 5/282 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y N + A+ LF+++P R V ++ ++I AYS + + L M ++ V P+
Sbjct: 326 LINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ L+AC L DLK ++ +++G +DVFV S+++++Y K G++ EA+ F
Sbjct: 386 MFTFSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFR 442
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V W+S+I + EA+ YK M++ G AD+ + +++AC L
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G H + ++ + D+ + +L+DMY K G L+ A +F M++ ++++W +I+G AQ
Sbjct: 503 GRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
NG + L L M+ G +P+ ++++ L AC+ G + G
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG 602
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y +++ A K+F E+ +NSII A+++ E L LY M + D
Sbjct: 424 LIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPAD 483
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST T L+AC SL L++G + L + D+ + +++L++Y KCG + +A F
Sbjct: 484 QSTLTSVLRACTSLSLLELGRQA--HVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFN 541
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +KD++ WS+MI GL NG EA++ ++ MK +G + + ++G++ AC S
Sbjct: 542 RMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFAC-----SHA 596
Query: 196 GLSVHGYSIRRHLNLDVKVQT------SLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
GL G+ R +N + ++D+ + LD + M+ ++VTW
Sbjct: 597 GLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRT 656
Query: 249 LISG 252
L+
Sbjct: 657 LLDA 660
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 303/549 (55%), Gaps = 31/549 (5%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE 96
P R ++ + + +R E + Y +M RPD+ F LKA L DLK GE
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 97 EIWRKAVELGYGND-VFVGSSMLNLYVKCGKM------NEAMVA--------------FE 135
+I AV+ GYG+ V V ++++N+Y KCG + N A++A FE
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+D+V W++MI+ + + EA+ ++ M EG++ D V + ++ AC+ L
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y +R + L + V ++LVDMY ++ VF ++ I W A+ISG+A
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 255 QNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQ-IGFLKLGKSIHGYTVRR-FDFN 311
+NGL L L +EM + G P++ ++ S + AC + + GK IH Y +R +
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +G++++DMY+KCG + +R +F++M ++++I+WNV+I + G+HG GEEAL LF M+
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412
Query: 372 TM-----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
KP+ TF ++ +A SHSGL+ EG F M + ++PT HYAC+VDLL R
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 472
Query: 427 AGEVEEALKIVDSMSTE-PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
AG++EEA ++V++M E + W +LL C H+ +GE AK +L L P+ + L
Sbjct: 473 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVL 532
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN ++ W + VRK MR+ G+KK PG S +E E+H F+ D SH Q E +
Sbjct: 533 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGF 592
Query: 546 LKKLYLEMR 554
L+ L +MR
Sbjct: 593 LETLSEKMR 601
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 187/402 (46%), Gaps = 37/402 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + ++ LFE R + ++N++I ++S+ + E L + M+ E V D
Sbjct: 154 LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELD 213
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV----FVGSSMLNLYVKCGKMNEAM 131
T L AC L L +G+EI + ND+ FVGS+++++Y C ++
Sbjct: 214 GVTIASVLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGR 270
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACA-D 189
F+ + + + W++MI+G NG +A+ + M K G+ + M ++ AC
Sbjct: 271 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHS 330
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L G +H Y+IR L D+ V ++LVDMYAK G L+L+ VF M N++TW L
Sbjct: 331 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVL 390
Query: 250 ISGFAQNGLAGSTLELLMEM-----QSCGFEPDSVSLVSALLACAQIGFLKLG------- 297
I +G LEL M + +P+ V+ ++ AC+ G + G
Sbjct: 391 IMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRM 450
Query: 298 KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR--DLISWNVIIASYGI 355
K HG + V+D+ + G A L + M + + +W+ ++ + I
Sbjct: 451 KHDHGVEPTSDHY-----ACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRI 505
Query: 356 HGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL-SHSGL 393
H + GE A L + +P+ ++ LLS + S +GL
Sbjct: 506 HQNVELGEVAAKNLLHL-----EPNVASHYVLLSNIYSSAGL 542
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 294/557 (52%), Gaps = 40/557 (7%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y N + + +LF + + S+I Y+ P + LG + M+ + PD +
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK-------------CG 125
F LK+C LMDL +GE + + +G D++ G++++N+Y K G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 126 KMNEAMVA-------------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
++ + M FE M KDLV W+++I G NG E + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M + D + ++ A+ D G +HG SIR+ L+ D+ V +SL+DMYAK
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ + VF ++ + ++W ++I+G QNGL L +M +P S S S +
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
ACA + L LGK +HGY R FD N+ + +S++DMY+KCG A+ +FD+M+ RD++S
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I +HG +A+ LF QM +K ++L+A SH GLV+E +F+ M
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMT 461
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ I P +HYA + DLL RAG +EEA + M P ++W LLS C HK +
Sbjct: 462 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMA 521
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
EKVA ++L+++P++ G + L++N ++ ++W+E A R +MR+ G++K P S +EV +
Sbjct: 522 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 581
Query: 526 LHAFIMEDKSHNQYEDI 542
++AF+ D+SH YE I
Sbjct: 582 VYAFMAGDESHPCYEKI 598
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I+ L A +I +Y + + ++F L R ++NSII + E L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ QM+ ++P S +F+ + AC L L +G+++ G+ ++F+ SS++++Y
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
KCG + A F++M+ +D+V W++MI G +GQ +A++ +++M+ EGI A
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKA 439
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 299/556 (53%), Gaps = 3/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK S++ + +IA+Y N + A ++F +P++ + +++SII +S+ FE
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA 253
Query: 61 LGLYNQMIKEDV-RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L +M+ V P+ F +LKAC SL+ G +I ++ + G S+ +
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +CG +N A F++++R D W+ +I GL NG EAV + +M+ G D +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM- 238
+ L+ A G+ +H Y I+ D+ V SL+ MY L ++F++
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ + V+W +++ Q+ L L M EPD +++ + L C +I LKLG
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y+++ + +IDMY+KCG AR +FD M +RD++SW+ +I Y G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
GEEAL LF +M ++P+H TF +L+A SH GLVEEG + M +++ I PT++H
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+C+VDLLARAG + EA + +D M EP + VW LLS C + +K A+ +LK++P
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ H L+ + A WE A +R +M+K +KK+PG S +E+ ++H F ED H
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 538 QYEDIVYVLKKLYLEM 553
+ +DI VL ++ +M
Sbjct: 734 ERDDIYTVLHNIWSQM 749
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 229/447 (51%), Gaps = 13/447 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+++YG + AR++F+ +P R + +Y S+I YS+ E + LY +M++ED+ PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F +KAC S D+ +G+++ + ++L + + ++++ +YV+ +M++A F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSR 194
+ KDL+ WSS+I G G EA+ K M G+ +E + ++AC+ L
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +HG I+ L + SL DMYA+ G L+ A VF + R + +W +I+G A
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
NG A + + +M+S GF PD++SL S L A + L G IH Y ++ F +L
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S++ MY+ C C LF+ ++ D +SWN I+ + H E L LF M+ +
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS 467
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ----PTEKHYACMVDLLARAG 428
+PDH T +LL G VE V Y ++ P + ++D+ A+ G
Sbjct: 468 ECEPDHITMGNLL-----RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
+ +A +I DSM + W L+ G
Sbjct: 523 SLGQARRIFDSMDNR-DVVSWSTLIVG 548
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 210/455 (46%), Gaps = 46/455 (10%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKE--------------DVRPDSSTFTVALK-- 84
V NS I+A S S + L N I D +S+F + L+
Sbjct: 11 VSVSNSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTY 70
Query: 85 -----ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
AC S L G +I + D + + +L++Y KCG + +A F+ M
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++LV ++S+I G NGQ EA+ Y +M +E + D+ +I+ACA D G +
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H I+ + + Q +L+ MY + + AS VF + ++++W ++I+GF+Q G
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 260 GSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
L L EM S G F P+ S+L AC+ + G IHG ++ N + G S
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ DMY++CG + AR +FDQ++ D SWNVIIA +G+ +EA+S+F QM + PD
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Query: 378 HSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+ SLL A + HS +++ G + DL V + Y DL
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWG-FLADLTVCNSLL----TMYTFCSDLYCC 425
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
E+ DS+S W +L+ C H++
Sbjct: 426 FNLFEDFRNNADSVS-------WNTILTACLQHEQ 453
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 313/582 (53%), Gaps = 40/582 (6%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+ NL ++ N ++ Y + + FE+LP R T+N +I YS +
Sbjct: 66 QPNLFSWNN----LLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVK 121
Query: 63 LYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
YN M+K+ T LK S + +G++I + ++LG+ + + VGS +L++Y
Sbjct: 122 AYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMY 181
Query: 122 VK-------------------------------CGKMNEAMVAFEKMQRKDLVCWSSMIN 150
K CG + +A+ F M+ KD V WS+MI
Sbjct: 182 SKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIK 240
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
GL NG +EA++ ++ MK EG+ D+ ++ AC LG G +H IR +L
Sbjct: 241 GLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQD 300
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+ V ++L+DMY K L A VF M + N+V+W A++ G+ Q G AG +++ ++MQ
Sbjct: 301 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQ 360
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVIDMYSKCGVPS 329
G +PD +L A+ ACA I L+ G HG + + + + S++ +Y KCG
Sbjct: 361 RSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDID 420
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+ LF++M RD +SW ++++Y G EA+ LF +M++ +KPD T ++SA S
Sbjct: 421 DSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACS 480
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
+GLVE+G+ +F+LM+++Y I P+ HY+CM+DL +R+G +EEA+ ++ M P W
Sbjct: 481 RAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGW 540
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
LLS C N IG+ A+ +++L+P + L+S+ +A + KW+ VA +R+ M++
Sbjct: 541 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEK 600
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV-LKKLY 550
++K PG S ++ G+LH+F +D+S + Y D +Y L++LY
Sbjct: 601 NVRKEPGQSWIKWKGKLHSFSADDES-SPYSDQIYAKLEELY 641
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 145/299 (48%), Gaps = 21/299 (7%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+TNL + +I +Y + A+ +F+ + + V ++ ++++ Y + E
Sbjct: 293 IIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEA 352
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ ++ M + + PD T A+ AC ++ L+ G + KA+ G + + V +S++ L
Sbjct: 353 VKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTL 412
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++++ F +M +D V W++M++ G+ EA+ + +M + G+ D V +
Sbjct: 413 YGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTL 472
Query: 181 MGLIQACA-----DLGDSRFGLSVHGYSI---RRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
G+I AC+ + G F L ++ Y I H + ++D+++++G ++ A
Sbjct: 473 TGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHY-------SCMIDLFSRSGRIEEAM 525
Query: 233 HVFKNMS-RINIVTWGALISGFAQNG---LAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
M R + + W L+S G + E L+E+ P +L+S++ A
Sbjct: 526 GFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP--HHPAGYTLLSSIYA 582
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 5/150 (3%)
Query: 288 CAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C +G + K IHG +R L +++ Y+ AR +FD + +L SW
Sbjct: 13 CIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSW 72
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N ++ +Y GH LS + E + D T+ L+ S SGLV ++ M+
Sbjct: 73 NNLLLAYSKSGH----LSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMK 128
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ T M+ L + G V +I
Sbjct: 129 DFSSNLTRVTLMTMLKLSSSNGHVSLGKQI 158
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 285/519 (54%), Gaps = 3/519 (0%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQ-MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
S++ Y + E L +++ ++ + P T + A L D+ G+ +
Sbjct: 170 TSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVI 229
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ D+ + +++L Y++ G + A FE M KD+V WS M+ G V +G EA+
Sbjct: 230 RNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALT 289
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
AYK+M + GI + V ++ ++QAC+ D G VH +++ L++ V T+LVDMY
Sbjct: 290 AYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYM 349
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K + A +F MS+ + V W +ISGF QNGL ++ + M G PD+V++V
Sbjct: 350 KCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVK 409
Query: 284 ALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC++ G ++ +HGY + F + + +++D+YSKCG CA +F+ +D
Sbjct: 410 VLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKD 469
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++ W+ +I+ YG+HG G++A+ LF M+ + VKP+ TF S+LSA SHSGLV+EG+ F+
Sbjct: 470 VVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFE 529
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M Y + P H++ MVDLL RAGE++EA K++ + W ALL+ C H
Sbjct: 530 SMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHG-NGRADAHTWCALLAACRAHHDT 588
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ E VA K+LKL+PD G + L++N + ++ W R +R G+ KVPG S VE+
Sbjct: 589 EMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVEL 648
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQ 561
N +H F ++ H +E I +L++ ++ + Q
Sbjct: 649 NNVMHTFTAGERPHKDWEKISRLLREFSRTLKGGDCFFQ 687
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 226/433 (52%), Gaps = 14/433 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR LF+E+P+ N+++ A+ R + L L + VRPD+ T ++ LKAC
Sbjct: 55 ARHLFDEIPVPTPRLANALLRAHVRARQWCDALLLIPCL---RVRPDAFTLSLLLKACAM 111
Query: 89 LMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L L G + A+ D FV ++++++Y KC M ++ A+ D+V +S
Sbjct: 112 LPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTS 171
Query: 148 MINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
M+ G N EA++ + R + +G V ++ +I A A L D G + H + IR
Sbjct: 172 MVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRN 231
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ D+ + +++ Y + G + A +F+ M+ ++VTW +++G+ Q+G L
Sbjct: 232 NFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAY 291
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
+M G +P++V++VS + AC+ ++ G+ +H V+ + + + T+++DMY KC
Sbjct: 292 KKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKC 351
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
A LF +M +D ++W V+I+ + +G +E++ +F M+ PD T +L
Sbjct: 352 SCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVL 411
Query: 386 SALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMST 442
+A S SG++ + L+++ + +K + A +VDL ++ G + A+++ +S +
Sbjct: 412 AACSESGVMRQAFCLHGYLVITGF----CDKIFVAAALVDLYSKCGNLGCAVRVFES-AM 466
Query: 443 EPGLAVWVALLSG 455
E + +W +++SG
Sbjct: 467 EKDVVLWSSMISG 479
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 198/376 (52%), Gaps = 4/376 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V I+ Y + +AR+LFE + + V T++ ++ Y + E L Y +M++ +
Sbjct: 240 VNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGI 299
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P++ T ++AC D++ G + AV++G ++ V ++++++Y+KC EAM
Sbjct: 300 KPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQ 359
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M +KD V W+ +I+G NG P E++ +K M G D V M+ ++ AC++ G
Sbjct: 360 LFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGV 419
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R +HGY + + V +LVD+Y+K G+L A VF++ ++V W ++ISG
Sbjct: 420 MRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISG 479
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+ +GL +EL M + +P+S++ VS L AC+ G ++ GK I + +
Sbjct: 480 YGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVP 539
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N V ++++D+ + G A L D +W ++A+ H E + + +++
Sbjct: 540 NAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAACRAHHDTEMSEVVAAKLL 599
Query: 371 ETMVKPDHSTFASLLS 386
+ + PDH+ + +LL+
Sbjct: 600 K--LDPDHAGYYNLLN 613
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 280/507 (55%), Gaps = 9/507 (1%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI A + ++ V +NS+I + +P + LY QMI+ PD TF LK
Sbjct: 53 DINYADLVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLK 112
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC + D G+ I V+ G+ D + + +L++YV C M + F+ + + ++V
Sbjct: 113 ACCVIADQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVA 172
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH---- 200
W+ +I G V N QP EA+ ++ M ++ +E+ M+ + ACA D G VH
Sbjct: 173 WTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIR 232
Query: 201 --GY-SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
GY N ++ + T++++MYAK G L +A +F M + NIV+W ++I+ + Q
Sbjct: 233 KAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYE 292
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L+L +M + G PD + +S L CA L LG+++H Y ++ ++ L T
Sbjct: 293 RHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLAT 352
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMVK 375
+++DMY+K G A+ +F +Q +D++ W +I +HGHG EALS+F M E + +
Sbjct: 353 ALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLV 412
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PDH T+ +L A SH GLVEE + F LM Y + P +HY CMVDLL+RAG EA +
Sbjct: 413 PDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAER 472
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQK 495
++++M+ +P +A+W ALL+GC H+ + +V ++ +L P G+H L+SN +A +
Sbjct: 473 LMETMTVQPNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGR 532
Query: 496 WEEVAGVRKTMRKSGMKKVPGYSVVEV 522
WEEV RK M+ + K G+S VE+
Sbjct: 533 WEEVNVTRKVMKHKRITKTIGHSSVEM 559
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 10/343 (2%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G +N A + ++ + W+SMI G V + PR ++ Y++M + G D ++
Sbjct: 52 GDINYADLVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVL 111
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+AC + D G +H ++ D T L+ MY + VF N+ + N+V
Sbjct: 112 KACCVIADQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVV 171
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH--- 301
W LI+G+ +N L++ +M EP+ +++V+AL+ACA + G+ +H
Sbjct: 172 AWTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRI 231
Query: 302 ---GYT--VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
GY + + N++L T++++MY+KCG AR LF++M R+++SWN +I +Y +
Sbjct: 232 RKAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQY 291
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
+EAL LF M + V PD +TF S+LS +H + G+ ++ K I
Sbjct: 292 ERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLL-KTGIATDISL 350
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++D+ A+ GE+ A KI S+ + + +W ++++G H
Sbjct: 351 ATALLDMYAKTGELGNAQKIFSSLQKK-DVVMWTSMINGLAMH 392
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 181/369 (49%), Gaps = 15/369 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ A + ++ +Y D+ S K+F+ +P V + +I Y + P+E
Sbjct: 130 IVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPYEA 189
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-------GNDVFV 113
L ++ M +V P+ T AL AC D+ G + ++ + GY +++ +
Sbjct: 190 LKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNIIL 249
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
+++L +Y KCG++ A F KM ++++V W+SMIN + +EA+D + M G+
Sbjct: 250 ATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTSGV 309
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D+ + ++ CA G +VH Y ++ + D+ + T+L+DMYAKTG L A
Sbjct: 310 YPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNAQK 369
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIG 292
+F ++ + ++V W ++I+G A +G L + MQ PD ++ + L AC+ +G
Sbjct: 370 IFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHVG 429
Query: 293 FLKLGKSIHGYTVRRFDFNLVLGT----SVIDMYSKCGVPSCARALFDQMQSRDLIS-WN 347
++ K + + + +V G ++D+ S+ G A L + M + I+ W
Sbjct: 430 LVEEAKK--HFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIWG 487
Query: 348 VIIASYGIH 356
++ IH
Sbjct: 488 ALLNGCQIH 496
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 308/541 (56%), Gaps = 6/541 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A ++F+ + + V +++S+I + F+ L + M+ V+P+
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPN 498
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF AL AC + L+ G+EI + G G++ +V +++L+LYVKCG+ + A F
Sbjct: 499 SVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS 558
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KD+V W+ M++G V +G A+ + +M + + + ACA LG
Sbjct: 559 VHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLG--RMGACSALAACACLGRLDV 616
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H + + V V +L++MYAK+ H+D A VFK M+ ++V+W ++I+GF
Sbjct: 617 GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCF 676
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N + L M +P+SV+ ++AL ACA G L+ GK IH Y +R +
Sbjct: 677 NHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 735
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++D+Y KCG S A A F +D++SWN++++ + HG G+ ALSLF QM+E
Sbjct: 736 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 795
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF L+ A S +G+V +G F K+ I P KHYACMVDLL+R G++ EA
Sbjct: 796 HPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 854
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ M +P AVW ALL+GC H+ +GE AK +L+L P+D+ H L+ + +
Sbjct: 855 NLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAG 914
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +VA VRKTMR+ G+++ G S VEV G HAF+ +D+SH Q ++I VL +Y M+
Sbjct: 915 KWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 974
Query: 555 A 555
A
Sbjct: 975 A 975
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 225/451 (49%), Gaps = 15/451 (3%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GN++ ++ +G +I A ++F ++P R V ++N ++ Y + E L LY +M+
Sbjct: 134 GNAMLSMLVRFG---EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+RPD TF L+ C + D +MG E+ + G+G++V V ++++ +Y KCG +
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ M D + W++MI G N + ++ + M + + + + + + A
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + F +HG++++R +DV SL+ MY G + A +F M + ++W A+
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG+ +NG LE+ M+ PD V++ SAL ACA +G L +G +H + F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+V+ ++++MY+K A +F M +D++SW+ +IA + + +AL F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRY 490
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLL 424
M+ VKP+ TF + LSA + +G + G+ Y + P ++DL
Sbjct: 491 ML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLDLY 544
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G+ A S+ +E + W +LSG
Sbjct: 545 VKCGQTSYAWAQF-SVHSEKDVVSWNIMLSG 574
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 202/404 (50%), Gaps = 30/404 (7%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-------------YGNDVFVGSSMLNL 120
PD + + C WR+AV+ G +G + +G++ML++
Sbjct: 94 PDEGAYVALFRLCE-----------WRRAVDAGMRACARADAEHPSFG--LRLGNAMLSM 140
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
V+ G++ A F KM +D+ W+ M+ G G EA+D Y RM G+ D
Sbjct: 141 LVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTF 200
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++ C + D R G VH + +R +V V +LV MYAK G + A VF M+
Sbjct: 201 PCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAM 260
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ ++W A+I+G +N + LEL + M +P+ +++ S +A + + K +
Sbjct: 261 TDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM 320
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ V+R F ++ S+I MY+ G A +F +M+++D +SW +I+ Y +G
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++AL ++ M V PD T AS L+A + G ++ G +L +K I+ A
Sbjct: 381 DKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA- 439
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKF 462
++++ A++ +++A+++ M+ E + W ++++G C NH+ F
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSF 482
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 303/550 (55%), Gaps = 37/550 (6%)
Query: 36 LPLRGVDT----YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LP +D YN I + + + L NQ K D+ + T+ L+ C L
Sbjct: 59 LPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKS 116
Query: 92 LKMGEEIWRKAVELGYGNDVFV----GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
++ G R+ + NDV V GS ++ +YV CG + E F+K+ + + W+
Sbjct: 117 IQDG----RRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNL 172
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGI--------------DADEVVMMGLIQACADLGDS 193
++NG G RE++ +KRM++ GI D D + +I G S
Sbjct: 173 LMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLS 232
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTS--------LVDMYAKTGHLDLASHVFKNMSRINIVT 245
GL + + +N D+ S L+DMY+K+G+L+ A VF+ M ++V+
Sbjct: 233 EKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 292
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++I+G+A+ GL+ ++ L EM+ P+S+++ L ACA + L+ G+ IHG+ +
Sbjct: 293 WTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHIL 352
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R F + + +++DMY KCG AR LFD + +DL+SW V+IA YG+HG+G EA++
Sbjct: 353 RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIA 412
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
F +M + ++PD +F S+L A SHSGL++EG +F++M + I+P +HYAC+VDLL
Sbjct: 413 AFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLL 472
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
ARAG + +A K + M EP +W ALL GC + + EKVA+ V +L P++ G +
Sbjct: 473 ARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYV 532
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L++N +A +KWEEV +R+ + + G++K PG S +E+ G++H F+ D SH I
Sbjct: 533 LLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIEL 592
Query: 545 VLKKLYLEMR 554
+LKK M+
Sbjct: 593 LLKKTRTRMK 602
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 131/244 (53%), Gaps = 12/244 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ SA ++FE + R V ++ S+I Y+R+ + L+++M KED+ P+
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC SL L+ G+EI + G+ D V ++++++Y+KCG + A + F+
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 384
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KDLV W+ MI G +G EA+ A+ M+ GI+ DEV + ++ AC S
Sbjct: 385 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC-----SHS 439
Query: 196 GLSVHGYS----IRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
GL G+ +R + ++ K + +VD+ A+ G+L A K M + WGA
Sbjct: 440 GLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGA 499
Query: 249 LISG 252
L+ G
Sbjct: 500 LLCG 503
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/605 (32%), Positives = 308/605 (50%), Gaps = 87/605 (14%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIII------------------------- 49
R+I +YG + + ARKLF+ +P R T+NS+I
Sbjct: 55 RLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCS 114
Query: 50 ------AYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+++ + E L + +M +ED + +F AL AC LMDL MG ++
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ Y DV++GS+++++Y KCG + A F M ++LV W+S+I NG EA++
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMY 222
+ RM G++ DEV + ++ ACA L + GL +H ++ + D+ + +LVDMY
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 223 AKTGHLDLASHVFKNMS-------------------------------RINIVTWGALIS 251
AK ++ A VF MS + N+V+W ALI+
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA 354
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G+ QNG L L ++ P + F L KS +
Sbjct: 355 GYTQNGENEEALRLFRLLKRESIWPTHYT------------FGNLLKS-----------D 391
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +G S+IDMY KCG +F++M+ RD +SWN II Y +G+G EAL +F +M+
Sbjct: 392 IFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLV 451
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KPDH T +L A SH+GLVEEGR++F + ++ + P + HY CMVDLL RAG +
Sbjct: 452 CGEKPDHVTMIGVLCACSHAGLVEEGRHYF-FSMEEHGLIPLKDHYTCMVDLLGRAGCLN 510
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA ++++M P VW +LL+ C H +G+ A+K+L+++P + G + L+SN +A
Sbjct: 511 EAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYA 570
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W +V VRK MR+ G+ K PG S +EV +H F+++DKSH + I VLK L
Sbjct: 571 ELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTE 630
Query: 552 EMRAI 556
+M+ +
Sbjct: 631 QMKRV 635
>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
Length = 587
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 285/519 (54%), Gaps = 3/519 (0%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQ-MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
S++ Y + E L +++ ++ + P T + A L D+ G+ +
Sbjct: 60 TSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVI 119
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ D+ + +++L Y++ G + A FE M KD+V WS M+ G V +G EA+
Sbjct: 120 RNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALT 179
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
AYK+M + GI + V ++ ++QAC+ D G VH +++ L++ V T+LVDMY
Sbjct: 180 AYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYM 239
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K + A +F MS+ + V W +ISGF QNGL ++ + M G PD+V++V
Sbjct: 240 KCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVK 299
Query: 284 ALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC++ G ++ +HGY + F + + +++D+YSKCG CA +F+ +D
Sbjct: 300 VLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKD 359
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++ W+ +I+ YG+HG G++A+ LF M+ + VKP+ TF S+LSA SHSGLV+EG+ F+
Sbjct: 360 VVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFE 419
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M Y + P H++ MVDLL RAGE++EA K++ + W ALL+ C H
Sbjct: 420 SMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHG-NGRADAHTWCALLAACRAHHDT 478
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ E VA K+LKL+PD G + L++N + ++ W R +R G+ KVPG S VE+
Sbjct: 479 EMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVEL 538
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQ 561
N +H F ++ H +E I +L++ ++ + Q
Sbjct: 539 NNVMHTFTAGERPHKDWEKISRLLREFSRTLKGGDCFFQ 577
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 198/376 (52%), Gaps = 4/376 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V I+ Y + +AR+LFE + + V T++ ++ Y + E L Y +M++ +
Sbjct: 130 VNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGI 189
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P++ T ++AC D++ G + AV++G ++ V ++++++Y+KC EAM
Sbjct: 190 KPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQ 249
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M +KD V W+ +I+G NG P E++ +K M G D V M+ ++ AC++ G
Sbjct: 250 LFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGV 309
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R +HGY + + V +LVD+Y+K G+L A VF++ ++V W ++ISG
Sbjct: 310 MRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISG 369
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+ +GL +EL M + +P+S++ VS L AC+ G ++ GK I + +
Sbjct: 370 YGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVP 429
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N V ++++D+ + G A L D +W ++A+ H E + + +++
Sbjct: 430 NAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAACRAHHDTEMSEVVAAKLL 489
Query: 371 ETMVKPDHSTFASLLS 386
+ + PDH+ + +LL+
Sbjct: 490 K--LDPDHAGYYNLLN 503
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 188/352 (53%), Gaps = 10/352 (2%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR- 167
D FV ++++++Y KC M ++ A+ D+V +SM+ G N EA++ + R
Sbjct: 23 TDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRH 82
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ +G V ++ +I A A L D G + H + IR + D+ + +++ Y + G
Sbjct: 83 VVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGA 142
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+ A +F+ M+ ++VTW +++G+ Q+G L +M G +P++V++VS + A
Sbjct: 143 VQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQA 202
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C+ ++ G+ +H V+ + + + T+++DMY KC A LF +M +D ++W
Sbjct: 203 CSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAW 262
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD-LMV 405
V+I+ + +G +E++ +F M+ PD T +L+A S SG++ + L++
Sbjct: 263 AVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVI 322
Query: 406 SKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + +K + A +VDL ++ G + A+++ +S + E + +W +++SG
Sbjct: 323 TGF----CDKIFVAAALVDLYSKCGNLGCAVRVFES-AMEKDVVLWSSMISG 369
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 296/555 (53%), Gaps = 4/555 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT A+ ++ +Y + + SA+ + E P R V T+ ++I + L
Sbjct: 36 LKTPFPAF--LYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSAL 93
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ M+ + VRP+ TF LKA L G+++ AV+ G NDVFVG S+ ++Y
Sbjct: 94 LHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMY 153
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G +N+A F++M ++L W++ I+ V +G+P ++V A+ + + G D +
Sbjct: 154 SKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFC 213
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+ AC+D G +HG+ IR +V V L+D Y K G ++ + VF M
Sbjct: 214 XFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGER 273
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N V+W +LI+ + QN L + + EP + S L ACA + ++ G+S+
Sbjct: 274 NSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQ 333
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
V+ + N+ + ++++DMY KCG A F+ M R+L+SWN ++ Y GH
Sbjct: 334 ALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHAN 393
Query: 361 EALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+A++L +M + P + + LSA S +G ++ G F+ M +Y ++P +HYAC
Sbjct: 394 KAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYAC 453
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL RAG VE A + M P +++W ALL C H K +G+ A+K+ +L+P D
Sbjct: 454 LVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKD 513
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G H ++SN FA +WEEV VR M++ G+KK G+S + V+ +H F +DKSH +
Sbjct: 514 SGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKD 573
Query: 540 EDIVYVLKKLYLEMR 554
+I +L KL EM+
Sbjct: 574 PEIQDILGKLRKEMQ 588
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 296 LGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LG++ H ++ + F L +++MY+K + A+ + + R +++W +IA
Sbjct: 24 LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGS 83
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G AL F M+ V+P+ TF +L A + + G+ L V + I
Sbjct: 84 VQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIN-- 141
Query: 414 EKHYACMV-DLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ C V D+ ++ G + +A K+ D M L W A +S
Sbjct: 142 DVFVGCSVFDMYSKLGFLNDAYKVFDEMPHR-NLETWNAYIS 182
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 309/533 (57%), Gaps = 8/533 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRPDSSTFTVALKACV 87
AR +F+ + + +N++I+AY + P E + ++ Q ++ E+ D T L A
Sbjct: 277 ARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVS 336
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L +K+ E+ ++ G+ + + ++++ +Y +C ++ ++ F+KM +D V W++
Sbjct: 337 QLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNT 396
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I+ V NG EA+ M+K+ D V L+ A ++L + G H Y IRR
Sbjct: 397 IISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRG 456
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLEL 265
+ + +++ L+DMYAK+G + A +F+ S + TW A+I+G+ QNGL + L
Sbjct: 457 IQFE-GMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILL 515
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSK 324
L +M P++V+L S L AC+ +G + L + +HG+++RRF + N+ +GTS+ D YSK
Sbjct: 516 LKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSK 575
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG S A +F + ++ +++ ++ YG HG G+ AL+L+ M+ + ++PD TF ++
Sbjct: 576 CGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAI 635
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA ++SGLV+EG F+ M +KI+P+ +HY C+ D+L R G V EA + V + +
Sbjct: 636 LSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDA 695
Query: 445 G-LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGIHALVSNFFAMEQKWEEVAG 501
+ +W +LL C NH F +G+ VAKK+L + D G H L+SN +A E +WE+V
Sbjct: 696 NTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDR 755
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
VRK M++ G+ K G S VE+ G ++ F+ D+ H Q +I Y+L L L+M+
Sbjct: 756 VRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMK 808
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 217/439 (49%), Gaps = 16/439 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP--DSSTFTVALKAC 86
A L + LP +NS+II + P + L LY +M D TF+ LKAC
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKAC 127
Query: 87 VSLMDLKMGEEI----WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
D+ G+ I R G V +S+LN+Y C + A+ F+ M+R+++
Sbjct: 128 ALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC-QHEYALNVFDVMRRRNV 186
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+++I V + +AV+A+ M + + V + L A + LGDSR +G+
Sbjct: 187 VAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGF 246
Query: 203 SIRRHLNL---DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
+R+ + DV V +S + M++ G +D A VF N W +I + QN
Sbjct: 247 -MRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCP 305
Query: 260 GSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG-TS 317
+++ ++ ++S D V+L+S L A +Q+ +KL + H + ++ +L++ +
Sbjct: 306 VEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNA 365
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
V+ MYS+C + +FD+M RD +SWN II+++ +G EEAL L +M + D
Sbjct: 366 VMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLID 425
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA-LKI 436
T +LLSA S+ + G+ ++ + IQ E + ++D+ A++G + A L
Sbjct: 426 SVTATALLSAASNLRNLYVGKQTHAYLIRR-GIQ-FEGMESYLIDMYAKSGSIRTAELLF 483
Query: 437 VDSMSTEPGLAVWVALLSG 455
+ S++ A W A+++G
Sbjct: 484 EQNCSSDRDQATWNAIIAG 502
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 7/289 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N + ++ K+F+++ R ++N+II A+ + E L L +M K+ D
Sbjct: 366 VMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLID 425
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSMLNLYVKCGKMNEAMVA 133
S T T L A +L +L +G++ + G F G S ++++Y K G + A +
Sbjct: 426 SVTATALLSAASNLRNLYVGKQTHAYLIRRGIQ---FEGMESYLIDMYAKSGSIRTAELL 482
Query: 134 FEK--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE+ +D W+++I G NG +A+ K+M + + + V + ++ AC+ +G
Sbjct: 483 FEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+HG+SIRR L +V V TSL D Y+K G + A +VF N VT+ ++
Sbjct: 543 SMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMM 602
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ Q+G+ L L M G PD+V+ V+ L AC G + G I
Sbjct: 603 CYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQI 651
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS---CG-FEPDS 278
+ G LA H+ ++ R + V W ++I GF N L L L +M+S C F+P +
Sbjct: 60 CREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYT 119
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-----NLVLGTSVIDMYSKCGVPSCARA 333
S S L ACA + GK+IH + +R + ++ S+++MY+ C A
Sbjct: 120 FS--STLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQ-HEYALN 176
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+FD M+ R++++WN +I S+ +A+ F MI V P TF +L ALS G
Sbjct: 177 VFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGD 236
Query: 394 VEEGRYWFDLM 404
+ ++ M
Sbjct: 237 SRTVKMFYGFM 247
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 320/645 (49%), Gaps = 115/645 (17%)
Query: 5 NLSAYGNSVGRIIALYGGKNDIVSARKLFE---ELPLRGVD---------------TYNS 46
NL + + ++I L G +D +A +L + + P G+D +N+
Sbjct: 53 NLKQFNRILSQMI-LTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNT 111
Query: 47 IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC-VSLMDLKMGEEIWRKAVEL 105
++ AY + S + L LY M+K +V PD+ T+ + ++AC V L++ G+EI +++
Sbjct: 112 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG-GKEIHDHVLKV 170
Query: 106 GYGNDVFVGSSMLNLYVKCGKMN-------------------------------EAMVAF 134
G+ +DV+V ++++N+Y CG M EA + F
Sbjct: 171 GFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIF 230
Query: 135 EKMQRKDLVC-------------------------------WSSMINGLVFNGQPREAVD 163
++M ++++V WS++I+G NG EA+
Sbjct: 231 DQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALV 290
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ M G+ DEVV++ ++ ACA L + G +HG IR + V +Q +L+ MY+
Sbjct: 291 MFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS 350
Query: 224 -------------------------------KTGHLDLASHVFKNMSRINIVTWGALISG 252
K G ++ A +F M +IV+W A+ISG
Sbjct: 351 GSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISG 410
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+AQ+ TL L EMQ PD LVS + AC + L GK +H Y + N
Sbjct: 411 YAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVN 470
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++LGT+++DMY KCG A +F+ M+ + + SWN +I ++G E +L +F +M
Sbjct: 471 VILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN 530
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V P+ TF +L A H GLV+EGR F M+ K+ I+P KHY CMVDLL RAG +
Sbjct: 531 NGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN 590
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA K+++SM P +A W ALL C H +GE+V +K+++L PD G H L+SN FA
Sbjct: 591 EAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFA 650
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ WE+V VR M++ G+ K PG S++E NG +H F+ DK+H
Sbjct: 651 SKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTH 695
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 140/290 (48%), Gaps = 33/290 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARK----------------------------- 31
+I+ + +Y N +I +Y G +I+ A+K
Sbjct: 330 VIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKA 389
Query: 32 --LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSL 89
LF+ +P + + +++++I Y++ + E L L+++M +RPD + + AC L
Sbjct: 390 RALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHL 449
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
L G+ + + G +V +G+++L++Y+KCG + A+ F M+ K + W+++I
Sbjct: 450 AALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALI 509
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH-L 208
GL NG ++D + MK G+ +E+ MG++ AC +G G I +H +
Sbjct: 510 IGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI 569
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNG 257
+VK +VD+ + G L+ A + ++M ++ TWGAL+ ++G
Sbjct: 570 EPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 619
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 304/531 (57%), Gaps = 2/531 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A+++F P + V ++ +I ++ + E + ++ +MI + +P++ T + L A
Sbjct: 72 LADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPA 131
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
+L +++ + + V G+ +VFV ++++++Y K G M A FE M +++V W
Sbjct: 132 FANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTW 191
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+++++G +G EA+D + M+++G+ D +M LI A +G + G +HG+ IR
Sbjct: 192 NAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIR 251
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
D ++T+L+D+Y +D A VF MS ++ W +++GF+ ++
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKH 311
Query: 266 LMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYS 323
+M + DS++L+ L +C+ G L+ G+ +H ++ F N+ +G++VIDMY+
Sbjct: 312 FNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
CG A+ F M +D++ WN +IA G++G+G +A+ LFLQM + + PD STF S
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A SH+G+V EG F MV + P +HYAC++D+L RAG+++ A +++M +
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P V+ LL C H +G ++++K+ ++ P+D G + L+SN +A+ WE V R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
++R MKK PG+S +E+N E++ F+ +K H QY I +LK L L+++
Sbjct: 552 ASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIK 602
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 199/369 (53%), Gaps = 4/369 (1%)
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L DLK ++I + + G ++ F+ +S++N YV CG + +A F K++V W+ +
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+GL N EA+D ++ M + V + ++ A A+LG R SVH + +R
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V+T+LVDMY+K G + +A +F++MS N+VTW A++SG++ +G + ++L
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G D +++S + A +G L++G IHG+ +R ++ + + T+++D+Y
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLS 386
A +F +M +D+ +W +++ + H + A+ F +M+ +K D +LS
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+ SHSG +++GR L + K + ++D+ A G +E+A + M E +
Sbjct: 334 SCSHSGALQQGRRVHALAI-KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDV 391
Query: 447 AVWVALLSG 455
W A+++G
Sbjct: 392 VCWNAMIAG 400
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
++ +Y N + A ++F E+ ++ V + ++ +S + +N+M+ ++++
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKL 323
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS L +C L+ G + A++ + N++FVGS+++++Y CG + +A F
Sbjct: 324 DSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF 383
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M KD+VCW++MI G NG +A+D + +MK G+D DE + ++ AC+ G
Sbjct: 384 YGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVY 443
Query: 195 FGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
GL + + ++ H+ +++ ++D+ + G LD A NM
Sbjct: 444 EGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNM 488
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 314/582 (53%), Gaps = 34/582 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKND--IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
IK LS+ R+IA ++ AR++F+ +P + +N++I YSR P
Sbjct: 31 IKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQN 90
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ +Y M+ +++PD TF LK M L+ G+ + AV+ G+ +++FV + ++
Sbjct: 91 GVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIH 150
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
++ C ++ A F+ ++V W+ M++G Q +++ + M+K G+ + V
Sbjct: 151 MFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVT 210
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++ AC+ L D G ++ Y + ++ ++ L+DM+A G +D A VF NM
Sbjct: 211 LVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK 270
Query: 240 RINIVTWGALISGFAQNGLAG-------------------------------STLELLME 268
++++W ++++GFA G L L E
Sbjct: 271 NRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFRE 330
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
MQ +PD ++VS L ACA +G L+LG+ + Y + + +G ++IDMY KCG
Sbjct: 331 MQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGN 390
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A+ +F +M +D +W +I I+GHGEEAL++F MIE + PD T+ +L A
Sbjct: 391 VGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCA 450
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+H+G+VE+G+ +F M ++ I+P HY CMVDLL RAG +EEA +++ +M +P
Sbjct: 451 CTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSI 510
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW +LL C HK + E AK++L+L P++ ++ L+ N +A ++WE + VRK M
Sbjct: 511 VWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMM 570
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ G+KK PG S++E+NG ++ F+ D+SH Q ++I L+ +
Sbjct: 571 ERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENM 612
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 186/410 (45%), Gaps = 45/410 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV--KCGKMNEAMVAFEKMQRK 140
L+ C S+ LK +I +++G +D ++ + GKM A F+ + +
Sbjct: 14 LEKCKSMYQLK---QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP 70
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
L W++MI G P+ V Y M I D L++ ++G +
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
++++ + ++ VQ + + M++ +DLA VF +VTW ++SG+ +
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY----TVRRFDFNLVLGT 316
+ L +EM+ G P+SV+LV L AC+++ L+ GK I+ Y V R NL+L
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVER---NLILEN 247
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE---------------- 360
+IDM++ CG A+++FD M++RD+ISW I+ + G +
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307
Query: 361 ---------------EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
EAL+LF +M + VKPD T S+L+A +H G +E G W +
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE-WVKTYI 366
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K I+ ++D+ + G V +A K+ M + W A++ G
Sbjct: 367 DKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFT-WTAMIVG 415
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 282/496 (56%), Gaps = 7/496 (1%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+++ ++ P T+ + + C L G + R ++ G D F+ + ++ +Y G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
++ A F+K +++ + W+++ L G E + Y +M + G+++D +++
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 186 AC----ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
AC G +H + RR N V + T+LVDMYA+ G +D AS+VF M
Sbjct: 187 ACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVR 246
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+V+W A+I+ +A+NG A L EM ++ P+SV++VS L ACA + L+ G+
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRL 306
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHGY +RR D L + ++++ MY +CG + +FD+M RD++SWN +I+SYG+HG+
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G +A+ +F +M+ P TF S+L A SH GLVEEG+ F+ M + I+P +HYA
Sbjct: 367 GRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYA 426
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL RA ++EA K+V M TEPG VW +LL C H + E+ ++++ L P
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L+++ +A Q W+EV V+K + G++K+PG +EV ++++F+ D+ +
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPL 546
Query: 539 YEDIVYVLKKLYLEMR 554
E I L KL +M+
Sbjct: 547 MEQIHAFLVKLAEDMK 562
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 158/292 (54%), Gaps = 6/292 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y + ARK+F++ R + +N++ A + EVLGLY +M + V
Sbjct: 117 KLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176
Query: 75 DSSTFTVALKACV----SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV + L G+EI GY + V++ ++++++Y + G ++ A
Sbjct: 177 DRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYA 236
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F M +++V WS+MI NG+ EA+ ++ M E D+ + V M+ ++QACA
Sbjct: 237 SYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACA 296
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +RR L+ + V ++LV MY + G LD+ VF M ++V+W +
Sbjct: 297 SLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNS 356
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
LIS + +G +++ EM + G P V+ VS L AC+ G ++ GK +
Sbjct: 357 LISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ L + + ++ +YG + +++F+ + R V ++NS+I +Y +
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKA 370
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSS 116
+ ++ +M+ P TF L AC ++ G E +WR + G V +
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWR---DHGIKPQVEHYAC 427
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKD-LVCWSSMINGLVFNGQPREAVDAYKRM-KKEGID 174
M++L + +++EA + M+ + W S++ +G A A +R+ E +
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 175 ADEVVMMGLIQACADLGD 192
A V++ I A A + D
Sbjct: 488 AGNYVLLADIYAEAQMWD 505
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 293/539 (54%), Gaps = 8/539 (1%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
NL + N V + ND+ K+F+E+PL+ V ++N++I F ++
Sbjct: 104 NCNLLSLQNQVLHVYVKCKEFNDVC---KMFDEMPLKNVVSWNTLICGVVEGNCKFALVR 160
Query: 63 L----YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L + QM+ E + P+ T L+A + L D+ + ++ ++ G+ ++ FVGS+++
Sbjct: 161 LGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALV 220
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+ Y K G ++EA AF+++ +DLV W+ M++ NG +A +K M+ EG+ D
Sbjct: 221 DSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNF 280
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+I +C LG G VHG IR +LDV V ++LVDMY+K +++ A F M
Sbjct: 281 TFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM 340
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
NIV+W +I G+ Q+G + LL EM PD ++L S L +C +
Sbjct: 341 IVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVV 400
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y V F+ L + +++ YSKCG A F + D+ISW ++ +Y HG
Sbjct: 401 QVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHG 460
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+E + +F +M+ + V+PD F +LSA +H G V EG ++F+LM++ Y+I P +HY
Sbjct: 461 LSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHY 520
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
C++DLL RAG ++EA+ ++ SM EP A L C H+ + ++K+ + P
Sbjct: 521 TCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEP 580
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
++ ++L+SN +A W +VA VRK MR+ KVPG S +E+ GE+H F+ DK+H
Sbjct: 581 NEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEVHTFVSRDKTH 639
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 215/418 (51%), Gaps = 19/418 (4%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
ALK L L G+++ ++LG N + + + +L++YVKC + N+ F++M K+
Sbjct: 79 ALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKN 138
Query: 142 LVCWSSMINGLVFNGQPREAV-----DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+V W+++I G+V G + A+ +++M E + + + + GL++A +L D
Sbjct: 139 VVSWNTLICGVV-EGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+H + ++ + + V ++LVD YAK G +D A F +S ++V W ++S +A N
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALN 257
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLG 315
G+ G + M+ G + D+ + S + +C +G LGK +HG +R FD ++++
Sbjct: 258 GVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA 317
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++++DMYSK AR FD M ++++SW +I YG HG G+EA+ L +MI
Sbjct: 318 SALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTY 377
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL----ARAGEVE 431
PD AS+LS+ + E + V Y ++ + + + + L ++ G +
Sbjct: 378 PDELALASILSSCGNLSATSE-----VVQVHAYVVENGFEAFLSIANALVSAYSKCGSIG 432
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
A + S++ EP + W +L+ H G +V +K+L N PD + ++S
Sbjct: 433 SAFQSFSSVA-EPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLS 489
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 271/470 (57%), Gaps = 2/470 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D + LK C L G + ++ + +D+ +G+++LN+Y KCG + EA F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM ++D V W+++I+G + +P +A+ + +M + G +E + +I+A A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ + +V V ++L+D+Y + G +D A VF + N V+W ALI+G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+ LEL M GF P S S AC+ GFL+ GK +H Y ++ + +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
G +++DMY+K G AR +FD++ RD++SWN ++ +Y HG G+EA+ F +M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+ +F S+L+A SHSGL++EG ++++LM K I P HY +VDLL RAG++ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L+ ++ M EP A+W ALL+ C HK +G A+ V +L+PDD G H ++ N +A
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+W + A VRK M++SG+KK P S VE+ +H F+ D+ H Q E+I
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 178/349 (51%), Gaps = 6/349 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARK+FE++P R T+ ++I YS+ + P + L +NQM++ P+
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +KA + G ++ V+ G+ ++V VGS++L+LY + G M++A + F+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W+++I G +A++ ++ M ++G L AC+ G
Sbjct: 221 ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ 280
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y I+ L +L+DMYAK+G + A +F +++ ++V+W +L++ +AQ
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G + EM+ G P+ +S +S L AC+ G L G H Y + + D +
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVPEA 398
Query: 316 ---TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
+V+D+ + G + A ++M + W ++ + +H + E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK+ + ++ +Y I ARK+F+ L R V ++NS++ AY++ E
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ + +M + +RP+ +F L AC L G + + G + + ++++L
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+ G +N A+ E+M W +++N
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 186/625 (29%), Positives = 320/625 (51%), Gaps = 71/625 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ G ++IA Y N A + + +P V +++S+I A ++ + +
Sbjct: 41 ILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQS 100
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+G++++M + PD+ K C L K G++I A G D FV S+ ++
Sbjct: 101 IGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHM 160
Query: 121 YVKCGKMNEAMVAFEKMQRKD-----------------------------------LVCW 145
Y++CG+M +A F++M KD +V W
Sbjct: 161 YMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSW 220
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+ +++G +G +EAV +++M G D+V + ++ + D + G +HGY I+
Sbjct: 221 NGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIK 280
Query: 206 RHLNLDVKVQTSLVDMYAKTGHL-------------------------------DLASHV 234
+ L D V ++++DMY K+GH+ D A +
Sbjct: 281 QGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEM 340
Query: 235 F----KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
F + +N+V+W ++I+G AQNG LEL EMQ G +P+ V++ S L AC
Sbjct: 341 FGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGN 400
Query: 291 IGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
I L G+S HG+ VR + V +G+++IDMY+KCG ++ +F+ M +++L+ WN +
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSL 460
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
+ Y +HG +E +S+F ++ T +KPD +F SLLSA GL +EG +F++M +Y
Sbjct: 461 MNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYG 520
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
I+P +HY+CMV+LL RAG+++EA ++ + EP VW ALL+ C + E A
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAA 580
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+ L P++ G + L+SN +A + W EV +R M G+KK PG S ++V +++
Sbjct: 581 QKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTL 640
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMR 554
+ DKSH Q + I + ++ EMR
Sbjct: 641 LACDKSHPQIDQITEKMDEISEEMR 665
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 292/543 (53%), Gaps = 5/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + S+ LF +P +NS+I +Y E + L+ +M E ++ D
Sbjct: 303 LLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKED 362
Query: 76 SSTFTVALKACVSLMDLKM-GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + L C L D + G + A++ G D ++G+++L++YVK ++ A F
Sbjct: 363 VRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVF 422
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM+ D++ W++MI+ + +A + + M + I + ++ L+ C D D
Sbjct: 423 EKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLV 482
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG S+HG++I+ L ++ + TSL +MY G A+++F + ++V+W +LIS +
Sbjct: 483 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYI 542
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---FDFN 311
+N AG L L M S EP+SV++++ L +C Q+ L LG+ +H YT RR + +
Sbjct: 543 KNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMD 601
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L + I MY++CG A +F +Q+R ++SWN +I YG+HG G +A F QM++
Sbjct: 602 ASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLD 661
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KP++ +FAS+LSA SHSGL G F MV + I P HY CMVDLL R G
Sbjct: 662 DGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFS 721
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA+ ++SM EP ++W ALLS C + E + K+++L P + G L+SN +A
Sbjct: 722 EAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYA 781
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W EV +RK +R+ G+ K PG S + + ++H F D H Q E I L L
Sbjct: 782 AAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTS 841
Query: 552 EMR 554
+R
Sbjct: 842 LIR 844
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 231/452 (51%), Gaps = 5/452 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
VG + + + D V + ++F + +R + ++N+II + + L LY+ M+ E +
Sbjct: 199 VGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGI 258
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ D+ T V ++AC L++G ++ + A++ ND+F+ +++LN+Y G + +
Sbjct: 259 KFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWA 318
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F + D W+SMI+ + G EA+ + +M+ E I D + ++ C DL D
Sbjct: 319 LFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLND 378
Query: 193 -SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
S +G +H ++++ + LD + +L+ MY K + A +VF+ M +++++W +IS
Sbjct: 379 GSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMIS 438
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
FAQ+ EL + M + +S ++VS L C L G+SIHG+ ++ +
Sbjct: 439 AFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N L TS+ +MY CG A +F + RDL+SWN +I+SY + + +AL LF MI
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGE 429
+ +P+ T ++L++ + + G+ + + A + + AR G+
Sbjct: 559 SEL-EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGK 617
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ A KI ++ T + W A+++G H +
Sbjct: 618 LQYAEKIFCTLQTR-SIVSWNAMITGYGMHGR 648
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 197/362 (54%), Gaps = 12/362 (3%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NSII +++ ++ +L Y QM + PDS+T + LKAC L + G I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
L NDV VG+++++ Y KCG + EA F +M +DLV W+++I+G V +EAV
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMY 222
+ MKK G+ + ++ L+ AC ++ + R G +HGY +R L ++D V T+LV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+ + L+ VF M NIV+W A+I+GF G L+L M G + D+V+++
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDFNLV----LGTSVIDMYSKCGVPSCARALFDQM 338
+ ACA+ G L+LG +H ++ FNL+ + ++++MYS G + ALF+ +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIK---FNLINDLFILNALLNMYSDNGSLESSWALFNAV 323
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+ D WN +I+SY G EA++LF++M +K D T A +LS + + +G
Sbjct: 324 PTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND---LNDGS 380
Query: 399 YW 400
W
Sbjct: 381 IW 382
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 194/364 (53%), Gaps = 4/364 (1%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A K+F E+P R + ++N++I Y E + L+ +M K + P+S T L A
Sbjct: 111 VAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLA 170
Query: 86 CVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
C +++L++G+EI + G + D +VG++++ Y++ + V F M +++V
Sbjct: 171 CGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRV-FSLMLVRNIVS 229
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++I G + G +A+ Y M EGI D V M+ +IQACA+ G R G+ +H +I
Sbjct: 230 WNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAI 289
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ +L D+ + +L++MY+ G L+ + +F + + W ++IS + G +
Sbjct: 290 KFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIA 349
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKL-GKSIHGYTVRR-FDFNLVLGTSVIDMY 322
L ++M+ + D ++ L C + + G+ +H + ++ + + LG +++ MY
Sbjct: 350 LFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMY 409
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
K + A+ +F++M+ D+ISWN +I+++ +A LFL M E+ +K + T
Sbjct: 410 VKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIV 469
Query: 383 SLLS 386
SLL+
Sbjct: 470 SLLA 473
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 278/490 (56%), Gaps = 6/490 (1%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ ++PD+ TF +KAC L + G I + V+ GY + VF+ +S++ +Y KC K
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ F++M K+ V WS++I + + + +E +++M EG ++ A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNA 117
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
A + V+ + L+ D VQ++ M+A+ G +++A +F + ++VTW
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
I + + + L LL +M G PD+++L+ + AC+ + +L +HG
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237
Query: 307 RFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
F +N +L T++ID+Y KCG + AR +FD MQ R++I+W+ +I+ YG+HG G EAL+
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF QM + VKPDH TF S+LSA SHSGLV EG F+ M + + P +HYACMVD+L
Sbjct: 298 LFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDIL 356
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG+++EA ++ M P AVW ALL C H + E VA+ + L+P + G +
Sbjct: 357 GRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYV 416
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
++ N + + K +E +R M+ G+KK+ GYSV+E+ +L+AF+ D+SH Q + I
Sbjct: 417 ILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYS 476
Query: 545 VLKKLYLEMR 554
L++L +R
Sbjct: 477 ELERLMDRIR 486
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 12/347 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG + +R++F+E+P + ++++II A + + E L+ QM+ E RP
Sbjct: 51 LITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPS 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
A+ ACV + ++++R VE G D V S+ ++ +CG++ A F+
Sbjct: 111 RGAILNAM-ACVR--SHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFD 167
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KDLV W++ I V P EA+ K+M +GI D + ++G+I+AC+ L +
Sbjct: 168 GIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQL 227
Query: 196 GLSVHG-YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
VHG + N + V+T+L+D+Y K G L A VF M NI+TW A+ISG+
Sbjct: 228 AHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYG 287
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G L L +M++ +PD ++ VS L AC+ G + G R DF +
Sbjct: 288 MHGWGREALNLFDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMAR--DFGVTP 344
Query: 315 G----TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIH 356
++D+ + G A ++M R + W ++ + IH
Sbjct: 345 RPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 290/538 (53%), Gaps = 5/538 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + S+ LF +P +NS+I +Y E + L+ +M E ++ D
Sbjct: 303 LLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKED 362
Query: 76 SSTFTVALKACVSLMDLKM-GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + L C L D + G + A++ G D ++G+++L++YVK ++ A F
Sbjct: 363 VRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVF 422
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM+ D++ W++MI+ + +A + + M + I + ++ L+ C D D
Sbjct: 423 EKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLV 482
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG S+HG++I+ L ++ + TSL +MY G A+++F + ++V+W +LIS +
Sbjct: 483 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYI 542
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---FDFN 311
+N AG L L M S EP+SV++++ L +C Q+ L LG+ +H YT RR + +
Sbjct: 543 KNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMD 601
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L + I MY++CG A +F +Q+R ++SWN +I YG+HG G +A F QM++
Sbjct: 602 ASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLD 661
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KP++ +FAS+LSA SHSGL G F MV + I P HY CMVDLL R G
Sbjct: 662 DGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFS 721
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA+ ++SM EP ++W ALLS C + E + K+++L P + G L+SN +A
Sbjct: 722 EAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYA 781
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W EV +RK +R+ G+ K PG S + + ++H F D H Q E I L L
Sbjct: 782 AAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSL 839
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 231/452 (51%), Gaps = 5/452 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
VG + + + D V + ++F + +R + ++N+II + + L LY+ M+ E +
Sbjct: 199 VGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGI 258
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ D+ T V ++AC L++G ++ + A++ ND+F+ +++LN+Y G + +
Sbjct: 259 KFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWA 318
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F + D W+SMI+ + G EA+ + +M+ E I D + ++ C DL D
Sbjct: 319 LFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLND 378
Query: 193 -SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
S +G +H ++++ + LD + +L+ MY K + A +VF+ M +++++W +IS
Sbjct: 379 GSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMIS 438
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
FAQ+ EL + M + +S ++VS L C L G+SIHG+ ++ +
Sbjct: 439 AFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N L TS+ +MY CG A +F + RDL+SWN +I+SY + + +AL LF MI
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGE 429
+ +P+ T ++L++ + + G+ + + A + + AR G+
Sbjct: 559 SEL-EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGK 617
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ A KI ++ T + W A+++G H +
Sbjct: 618 LQYAEKIFCTLQTR-SIVSWNAMITGYGMHGR 648
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 197/362 (54%), Gaps = 12/362 (3%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NSII +++ ++ +L Y QM + PDS+T + LKAC L + G I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
L NDV VG+++++ Y KCG + EA F +M +DLV W+++I+G V +EAV
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMY 222
+ MKK G+ + ++ L+ AC ++ + R G +HGY +R L ++D V T+LV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+ + L+ VF M NIV+W A+I+GF G L+L M G + D+V+++
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDFNLV----LGTSVIDMYSKCGVPSCARALFDQM 338
+ ACA+ G L+LG +H ++ FNL+ + ++++MYS G + ALF+ +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIK---FNLINDLFILNALLNMYSDNGSLESSWALFNAV 323
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+ D WN +I+SY G EA++LF++M +K D T A +LS + + +G
Sbjct: 324 PTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND---LNDGS 380
Query: 399 YW 400
W
Sbjct: 381 IW 382
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 194/364 (53%), Gaps = 4/364 (1%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A K+F E+P R + ++N++I Y E + L+ +M K + P+S T L A
Sbjct: 111 VAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLA 170
Query: 86 CVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
C +++L++G+EI + G + D +VG++++ Y++ + V F M +++V
Sbjct: 171 CGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRV-FSLMLVRNIVS 229
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++I G + G +A+ Y M EGI D V M+ +IQACA+ G R G+ +H +I
Sbjct: 230 WNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAI 289
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ +L D+ + +L++MY+ G L+ + +F + + W ++IS + G +
Sbjct: 290 KFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIA 349
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKL-GKSIHGYTVRR-FDFNLVLGTSVIDMY 322
L ++M+ + D ++ L C + + G+ +H + ++ + + LG +++ MY
Sbjct: 350 LFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMY 409
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
K + A+ +F++M+ D+ISWN +I+++ +A LFL M E+ +K + T
Sbjct: 410 VKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIV 469
Query: 383 SLLS 386
SLL+
Sbjct: 470 SLLA 473
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 306/566 (54%), Gaps = 7/566 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY DI +A F E + V +N +++AY + ++ QM E++
Sbjct: 388 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 447
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ LK C+ L DL++GE+I + ++ + + +V S ++++Y K GK++ A
Sbjct: 448 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ KD+V W++MI G +A+ +++M GI +DEV + + ACA L
Sbjct: 508 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 567
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G +H + + D+ Q +LV +Y++ G ++ + F+ + + W AL+SGF
Sbjct: 568 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 627
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q+G L + + M G + ++ + SA+ A ++ +K GK +H + +D
Sbjct: 628 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 687
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I MY+KCG S A F ++ +++ +SWN II +Y HG G EAL F QMI +
Sbjct: 688 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 747
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P+H T +LSA SH GLV++G +F+ M S+Y + P +HY C+VD+L RAG +
Sbjct: 748 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 807
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M +P VW LLS C HK IGE A +L+L P+D + L+SN +A+
Sbjct: 808 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 867
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+KW+ R+ M++ G+KK PG S +EV +H+F + D++H ++I + L
Sbjct: 868 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 927
Query: 553 MRAISSWLQGHME-----EHEEHDPL 573
I ++Q +HE+ DP+
Sbjct: 928 ASEI-GYVQDCFSLLNELQHEQKDPI 952
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 229/457 (50%), Gaps = 4/457 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + G ++ Y K D+ A K+F+E+P R + T+N +I + + EV
Sbjct: 71 ILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV 130
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
GL+ +M+ E+V P+ TF+ L+AC + + E+I + + G + V + +++
Sbjct: 131 FGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLID 190
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
LY + G ++ A F+ ++ KD W +MI+GL N EA+ + M GI
Sbjct: 191 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 250
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ AC + G +HG ++ + D V +LV +Y G+L A H+F NMS
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ + VT+ LI+G +Q G +EL M G EPDS +L S ++AC+ G L G+
Sbjct: 311 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 370
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H YT + F N + +++++Y+KC A F + + +++ WNV++ +YG+
Sbjct: 371 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 430
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+ +F QM + P+ T+ S+L G +E G ++ K Q +
Sbjct: 431 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYVCS 489
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G+++ A I+ + + + W +++G
Sbjct: 490 VLIDMYAKLGKLDTAWDILIRFAGKD-VVSWTTMIAG 525
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 226/445 (50%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY +++SA +F + R TYN++I S+ + + L+ +M + + PD
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + AC + L G+++ +LG+ ++ + ++LNLY KC + A+ F
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + +++V W+ M+ R + +++M+ E I ++ +++ C LGD
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 468
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + L+ V + L+DMYAK G LD A + + ++V+W +I+G+ Q
Sbjct: 469 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 528
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
L +M G D V L +A+ ACA + LK G+ IH V F +L
Sbjct: 529 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 588
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++ +YS+CG + F+Q ++ D I+WN +++ + G+ EEAL +F++M +
Sbjct: 589 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 648
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
++ TF S + A S + +++G+ ++ TE A ++ + A+ G + +A
Sbjct: 649 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-LISMYAKCGSISDAE 707
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K +ST+ ++ W A+++ H
Sbjct: 708 KQFLEVSTKNEVS-WNAIINAYSKH 731
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 223/443 (50%), Gaps = 7/443 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+ L L+ ++ ++I S+ E E + L+ M + P
Sbjct: 188 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 247
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ L AC + L++GE++ ++LG+ +D +V +++++LY G + A F
Sbjct: 248 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D V ++++INGL G +A++ +KRM +G++ D + L+ AC+ G
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+ + + K++ +L+++YAK ++ A F N+V W ++ +
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
++ + +MQ P+ + S L C ++G L+LG+ IH ++ F N +
Sbjct: 428 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G A + + +D++SW +IA Y + ++AL+ F QM++ +
Sbjct: 488 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 547
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQ-PTEKHYACMVDLLARAGEVEE 432
+ D + +SA + ++EG+ VS + P + +V L +R G++EE
Sbjct: 548 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCGKIEE 604
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
+ + +A W AL+SG
Sbjct: 605 SYLAFEQTEAGDNIA-WNALVSG 626
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 202/401 (50%), Gaps = 25/401 (6%)
Query: 1 MIKTN--LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKTN L+AY SV +I +Y + +A + + V ++ ++I Y++
Sbjct: 476 IIKTNFQLNAYVCSV--LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 533
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L + QM+ +R D T A+ AC L LK G++I +A G+ +D+ ++++
Sbjct: 534 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 593
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
LY +CGK+ E+ +AFE+ + D + W+++++G +G EA+ + RM +EGID +
Sbjct: 594 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 653
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++A ++ + + G VH + + + +V +L+ MYAK G + A F +
Sbjct: 654 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 713
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG- 297
S N V+W A+I+ ++++G L+ +M P+ V+LV L AC+ IG + G
Sbjct: 714 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 773
Query: 298 ------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVII 350
S +G + + + V+DM ++ G+ S A+ +M + D + W ++
Sbjct: 774 AYFESMNSEYGLSPKPEHY-----VCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 828
Query: 351 ASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
++ +H + GE A L++ +P+ S LLS L
Sbjct: 829 SACVVHKNMEIGEFAAHHLLEL-----EPEDSATYVLLSNL 864
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 168 MKKEGIDADEVVMMGLIQACADL-GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
++ GI + + L++ C G G +H ++ L+ + + L D Y G
Sbjct: 35 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 94
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
L A VF M I TW +I A L G L + M S P+ + L
Sbjct: 95 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 154
Query: 287 AC--AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
AC + F + + IH + + + V+ +ID+YS+ G AR +FD ++ +D
Sbjct: 155 ACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 213
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
SW +I+ + EA+ LF M + P F+S+LSA +E G L
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273
Query: 404 MVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ K+ + Y C +V L G + A I +MS + + L++G +
Sbjct: 274 VL---KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-TYNTLINGL---SQ 326
Query: 462 FSIGEKVAKKVLKLNPDDL 480
GEK + +++ D L
Sbjct: 327 CGYGEKAMELFKRMHLDGL 345
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 271/470 (57%), Gaps = 2/470 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D + LK C L G + ++ + +D+ +G+++LN+Y KCG + EA F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM ++D V W+++I+G + +P +A+ + +M + G +E + +I+A A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ + +V V ++L+D+Y + G +D A VF + N V+W ALI+G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+ LEL M GF P S S AC+ GFL+ GK +H Y ++ + +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
G +++DMY+K G AR +FD++ RD++SWN ++ +Y HG G+EA+ F +M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+ +F S+L+A SHSGL++EG ++++LM K I P HY +VDLL RAG++ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L+ ++ M EP A+W ALL+ C HK +G A+ V +L+PDD G H ++ N +A
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+W + A VRK M++SG+KK P S VE+ +H F+ D+ H Q E+I
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 178/349 (51%), Gaps = 6/349 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARK+FE++P R T+ ++I YS+ + P + L +NQM++ P+
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +KA + G ++ V+ G+ ++V VGS++L+LY + G M++A + F+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W+++I G +A++ ++ M ++G L AC+ G
Sbjct: 221 ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ 280
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y I+ L +L+DMYAK+G + A +F +++ ++V+W +L++ +AQ
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G + EM+ G P+ +S +S L AC+ G L G H Y + + D +
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVPEA 398
Query: 316 ---TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
+V+D+ + G + A ++M + W ++ + +H + E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK+ + ++ +Y I ARK+F+ L R V ++NS++ AY++ E
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ + +M + +RP+ +F L AC L G + + G + + ++++L
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+ G +N A+ E+M W +++N
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 306/566 (54%), Gaps = 7/566 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY DI +A F E + V +N +++AY + ++ QM E++
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ LK C+ L DL++GE+I + ++ + + +V S ++++Y K GK++ A
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ KD+V W++MI G +A+ +++M GI +DEV + + ACA L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G +H + + D+ Q +LV +Y++ G ++ + F+ + + W AL+SGF
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q+G L + + M G + ++ + SA+ A ++ +K GK +H + +D
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I MY+KCG S A F ++ +++ +SWN II +Y HG G EAL F QMI +
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P+H T +LSA SH GLV++G +F+ M S+Y + P +HY C+VD+L RAG +
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M +P VW LLS C HK IGE A +L+L P+D + L+SN +A+
Sbjct: 848 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+KW+ R+ M++ G+KK PG S +EV +H+F + D++H ++I + L
Sbjct: 908 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 967
Query: 553 MRAISSWLQGHME-----EHEEHDPL 573
I ++Q +HE+ DP+
Sbjct: 968 ASEI-GYVQDCFSLLNELQHEQKDPI 992
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 229/457 (50%), Gaps = 4/457 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + G ++ Y K D+ A K+F+E+P R + T+N +I + + EV
Sbjct: 111 ILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV 170
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
GL+ +M+ E+V P+ TF+ L+AC + + E+I + + G + V + +++
Sbjct: 171 FGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
LY + G ++ A F+ ++ KD W +MI+GL N EA+ + M GI
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ AC + G +HG ++ + D V +LV +Y G+L A H+F NMS
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ + VT+ LI+G +Q G +EL M G EPDS +L S ++AC+ G L G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H YT + F N + +++++Y+KC A F + + +++ WNV++ +YG+
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+ +F QM + P+ T+ S+L G +E G ++ K Q +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYVCS 529
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G+++ A I+ + + + W +++G
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKD-VVSWTTMIAG 565
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 226/445 (50%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY +++SA +F + R TYN++I S+ + + L+ +M + + PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + AC + L G+++ +LG+ ++ + ++LNLY KC + A+ F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + +++V W+ M+ R + +++M+ E I ++ +++ C LGD
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + L+ V + L+DMYAK G LD A + + ++V+W +I+G+ Q
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
L +M G D V L +A+ ACA + LK G+ IH V F +L
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++ +YS+CG + F+Q ++ D I+WN +++ + G+ EEAL +F++M +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
++ TF S + A S + +++G+ ++ TE A ++ + A+ G + +A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-LISMYAKCGSISDAE 747
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K +ST+ ++ W A+++ H
Sbjct: 748 KQFLEVSTKNEVS-WNAIINAYSKH 771
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 223/443 (50%), Gaps = 7/443 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+ L L+ ++ ++I S+ E E + L+ M + P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ L AC + L++GE++ ++LG+ +D +V +++++LY G + A F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D V ++++INGL G +A++ +KRM +G++ D + L+ AC+ G
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+ + + K++ +L+++YAK ++ A F N+V W ++ +
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
++ + +MQ P+ + S L C ++G L+LG+ IH ++ F N +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G A + + +D++SW +IA Y + ++AL+ F QM++ +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQ-PTEKHYACMVDLLARAGEVEE 432
+ D + +SA + ++EG+ VS + P + +V L +R G++EE
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCGKIEE 644
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
+ + +A W AL+SG
Sbjct: 645 SYLAFEQTEAGDNIA-WNALVSG 666
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 202/401 (50%), Gaps = 25/401 (6%)
Query: 1 MIKTN--LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKTN L+AY SV +I +Y + +A + + V ++ ++I Y++
Sbjct: 516 IIKTNFQLNAYVCSV--LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L + QM+ +R D T A+ AC L LK G++I +A G+ +D+ ++++
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
LY +CGK+ E+ +AFE+ + D + W+++++G +G EA+ + RM +EGID +
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++A ++ + + G VH + + + +V +L+ MYAK G + A F +
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG- 297
S N V+W A+I+ ++++G L+ +M P+ V+LV L AC+ IG + G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 298 ------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVII 350
S +G + + + V+DM ++ G+ S A+ +M + D + W ++
Sbjct: 814 AYFESMNSEYGLSPKPEHY-----VCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
Query: 351 ASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
++ +H + GE A L++ +P+ S LLS L
Sbjct: 869 SACVVHKNMEIGEFAAHHLLEL-----EPEDSATYVLLSNL 904
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 168 MKKEGIDADEVVMMGLIQACADL-GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
++ GI + + L++ C G G +H ++ L+ + + L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
L A VF M I TW +I A L G L + M S P+ + L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 287 AC--AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
AC + F + + IH + + + V+ +ID+YS+ G AR +FD ++ +D
Sbjct: 195 ACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
SW +I+ + EA+ LF M + P F+S+LSA +E G L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 404 MVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ K+ + Y C +V L G + A I +MS + + L++G +
Sbjct: 314 VL---KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-TYNTLINGL---SQ 366
Query: 462 FSIGEKVAKKVLKLNPDDL 480
GEK + +++ D L
Sbjct: 367 CGYGEKAMELFKRMHLDGL 385
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 304/532 (57%), Gaps = 18/532 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SA +FE + R T+ ++I +Y+ E L L+ M K +V P+
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPN 300
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV-----FVGSSMLNLYVKCGKMNEA 130
S T + L++C +L L+ G+ + ++ ND+ +G ++L LY K +
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIK----NDLDANLDCLGPTLLELYAATAKHDLC 356
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
++ + + W+++I+ G +E VD + RM+K+G D + + A +
Sbjct: 357 EKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G+ + GL +HG+ I+R +D V SL++MY+K G++DLA +F M +VTW ++I
Sbjct: 417 GELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMI 475
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH----GYTVR 306
SG +QNG + + L M E V+ VS + AC+ +GFL+ GK IH VR
Sbjct: 476 SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVR 535
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ F + T+++DMY+KCG A+ +FD M R ++SW+ +I+SYG+HG E + LF
Sbjct: 536 KCIF---IETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLF 592
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M+E+ +KP+ T ++LSA SH+G V+EG +F+ M + I+P +H+ C+VDLL+R
Sbjct: 593 SKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSR 651
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG+++EA +I+ M PG ++W ALL+GC H++ I + + +++ + DD G + L+
Sbjct: 652 AGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLL 711
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
SN +A +W E VR M+ +G+KKVP YSVVE+ + + F D S+ Q
Sbjct: 712 SNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGDASYPQ 763
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 256/476 (53%), Gaps = 7/476 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++YG + SARK+F E+PLR + +++SII + E L + M+ E PD
Sbjct: 140 LLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S ++AC L L++ + ++ G ND FV SS++ +Y KCG + A + FE
Sbjct: 200 SVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFE 259
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + W++MI+ G +EA+ + M+K ++ + V M ++++C +L R
Sbjct: 260 NVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLRE 319
Query: 196 GLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G SVH I+ L NLD + +L+++YA T DL + + I W LIS +
Sbjct: 320 GKSVHCVVIKNDLDANLDC-LGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQ GL T++L + MQ GF PDS SL S+L A G L+LG IHG+ ++R +
Sbjct: 379 AQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEY 438
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I+MYSKCG A +FDQM+ + +++WN +I+ +G+ +A+SLF M T
Sbjct: 439 VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTC 498
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ F S++ A SH G +E+G+ W + ++ +VD+ A+ G+++ A
Sbjct: 499 PEIGEVAFVSVIQACSHLGFLEKGK-WIHHKLITCGVRKCIFIETALVDMYAKCGDLQTA 557
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
++ D+MS E + W +L+S H + S + K+L+ + P+D+ + ++S
Sbjct: 558 QRVFDNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLS 612
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 222/403 (55%), Gaps = 13/403 (3%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + LY+QM+ + ++ +S TF L+AC DL +G+ + + ++ G+ D V +++L
Sbjct: 82 EAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALL 141
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y + G ++ A F +M +DLV WSS+I+ +V NG+ E +DA++ M EG D V
Sbjct: 142 SVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSV 201
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+++ +++AC +LG R S HGY ++R + D V +SL+ MYAK G L A VF+N+
Sbjct: 202 LVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENV 261
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ + TW A+IS + G L L + MQ EP+SV++ L +C + L+ GK
Sbjct: 262 TYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGK 321
Query: 299 SIHGYTVRR-FDFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
S+H ++ D NL LG +++++Y+ + ++ R + WN +I+ Y
Sbjct: 322 SVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQK 381
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT--- 413
G +E + LF++M + PD + AS LSA + G ++ G L + + I+
Sbjct: 382 GLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLG-----LQIHGHVIKRPFMD 436
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEP-GLAVWVALLSG 455
E + ++++ ++ G V+ A I D M EP G+ W +++SG
Sbjct: 437 EYVFNSLINMYSKCGYVDLAYMIFDQM--EPKGVVTWNSMISG 477
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 182/347 (52%), Gaps = 2/347 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
ND + ++ Y + G + + F D W ++ V+NG +EA+ Y +M
Sbjct: 31 NDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQM 90
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ I A+ +++AC+ GD G VHG I+ ++D V T+L+ +Y + G+L
Sbjct: 91 LSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYL 150
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
D A VF M ++V+W ++IS +NG L+ M S G PDSV +++ + AC
Sbjct: 151 DSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEAC 210
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
++G L+L KS HGY ++R + + + +S+I MY+KCG A +F+ + R +W
Sbjct: 211 GELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWT 270
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I+SY + G+ +EAL+LF+ M +T V+P+ T +L + ++ L+ EG+ +++
Sbjct: 271 AMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKN 330
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ +++L A + + KI+ + G+AVW L+S
Sbjct: 331 DLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR-GIAVWNTLIS 376
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 165/298 (55%), Gaps = 2/298 (0%)
Query: 1 MIKTNLSAYGNSVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+IK +L A + +G ++ LY K+ E+ RG+ +N++I Y++K E
Sbjct: 327 VIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKE 386
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ L+ +M K+ PDS + +L A + +L++G +I ++ + D +V +S++N
Sbjct: 387 TVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MDEYVFNSLIN 445
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG ++ A + F++M+ K +V W+SMI+GL NG +A+ + M + EV
Sbjct: 446 MYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVA 505
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ +IQAC+ LG G +H I + + ++T+LVDMYAK G L A VF NMS
Sbjct: 506 FVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS 565
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
++V+W +LIS + +G + L +M G +P+ V++++ L AC+ G +K G
Sbjct: 566 ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEG 623
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 3/257 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H + I L+ D T L++ Y++ G L ++ VF+ + WG L+ NG
Sbjct: 20 LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGC 79
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ L +M S + +S + S L AC+ G L +G+ +HG ++ FD + V+ T+
Sbjct: 80 YQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTA 139
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++ +Y + G AR +F +M RDL+SW+ II+S +G E L F M+ PD
Sbjct: 140 LLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+++ A G++ + ++ K I+ + ++ + A+ G + A +IV
Sbjct: 200 SVLVLTVVEACGELGVLRLAKSAHGYIL-KRGIENDRFVDSSLIFMYAKCGSLRSA-EIV 257
Query: 438 DSMSTEPGLAVWVALLS 454
T + W A++S
Sbjct: 258 FENVTYRSTSTWTAMIS 274
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 304/532 (57%), Gaps = 18/532 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SA +FE + R T+ ++I +Y+ E L L+ M K +V P+
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPN 300
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV-----FVGSSMLNLYVKCGKMNEA 130
S T + L++C +L L+ G+ + ++ ND+ +G ++L LY K +
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIK----NDLDANLDCLGPTLLELYAATAKHDLC 356
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
++ + + W+++I+ G +E VD + RM+K+G D + + A +
Sbjct: 357 EKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G+ + GL +HG+ I+R +D V SL++MY+K G++DLA +F M +VTW ++I
Sbjct: 417 GELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMI 475
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH----GYTVR 306
SG +QNG + + L M E V+ VS + AC+ +GFL+ GK IH VR
Sbjct: 476 SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVR 535
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ F + T+++DMY+KCG A+ +FD M R ++SW+ +I+SYG+HG E + LF
Sbjct: 536 KCIF---IETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLF 592
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M+E+ +KP+ T ++LSA SH+G V+EG +F+ M + I+P +H+ C+VDLL+R
Sbjct: 593 SKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSR 651
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG+++EA +I+ M PG ++W ALL+GC H++ I + + +++ + DD G + L+
Sbjct: 652 AGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLL 711
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
SN +A +W E VR M+ +G+KKVP YSVVE+ + + F D S+ Q
Sbjct: 712 SNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGDASYPQ 763
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 256/476 (53%), Gaps = 7/476 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++YG + SARK+F E+PLR + +++SII + E L + M+ E PD
Sbjct: 140 LLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S ++AC L L++ + ++ G ND FV SS++ +Y KCG + A + FE
Sbjct: 200 SVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFE 259
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + W++MI+ G +EA+ + M+K ++ + V M ++++C +L R
Sbjct: 260 NVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLRE 319
Query: 196 GLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G SVH I+ L NLD + +L+++YA T DL + + I W LIS +
Sbjct: 320 GKSVHCVVIKNDLDANLDC-LGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
AQ GL T++L + MQ GF PDS SL S+L A G L+LG IHG+ ++R +
Sbjct: 379 AQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEY 438
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I+MYSKCG A +FDQM+ + +++WN +I+ +G+ +A+SLF M T
Sbjct: 439 VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTC 498
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ F S++ A SH G +E+G+ W + ++ +VD+ A+ G+++ A
Sbjct: 499 PEIGEVAFVSVIQACSHLGFLEKGK-WIHHKLITCGVRKCIFIETALVDMYAKCGDLQTA 557
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
++ D+MS E + W +L+S H + S + K+L+ + P+D+ + ++S
Sbjct: 558 QRVFDNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLS 612
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 222/403 (55%), Gaps = 13/403 (3%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + LY+QM+ + ++ +S TF L+AC DL +G+ + + ++ G+ D V +++L
Sbjct: 82 EAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALL 141
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y + G ++ A F +M +DLV WSS+I+ +V NG+ E +DA++ M EG D V
Sbjct: 142 SVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSV 201
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+++ +++AC +LG R S HGY ++R + D V +SL+ MYAK G L A VF+N+
Sbjct: 202 LVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENV 261
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ + TW A+IS + G L L + MQ EP+SV++ L +C + L+ GK
Sbjct: 262 TYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGK 321
Query: 299 SIHGYTVRR-FDFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
S+H ++ D NL LG +++++Y+ + ++ R + WN +I+ Y
Sbjct: 322 SVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQK 381
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT--- 413
G +E + LF++M + PD + AS LSA + G ++ G L + + I+
Sbjct: 382 GLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLG-----LQIHGHVIKRPFMD 436
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEP-GLAVWVALLSG 455
E + ++++ ++ G V+ A I D M EP G+ W +++SG
Sbjct: 437 EYVFNSLINMYSKCGYVDLAYMIFDQM--EPKGVVTWNSMISG 477
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 182/347 (52%), Gaps = 2/347 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
ND + ++ Y + G + + F D W ++ V+NG +EA+ Y +M
Sbjct: 31 NDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQM 90
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ I A+ +++AC+ GD G VHG I+ ++D V T+L+ +Y + G+L
Sbjct: 91 LSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYL 150
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
D A VF M ++V+W ++IS +NG L+ M S G PDSV +++ + AC
Sbjct: 151 DSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEAC 210
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
++G L+L KS HGY ++R + + + +S+I MY+KCG A +F+ + R +W
Sbjct: 211 GELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWT 270
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I+SY + G+ +EAL+LF+ M +T V+P+ T +L + ++ L+ EG+ +++
Sbjct: 271 AMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKN 330
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ +++L A + + KI+ + G+AVW L+S
Sbjct: 331 DLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR-GIAVWNTLIS 376
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 165/298 (55%), Gaps = 2/298 (0%)
Query: 1 MIKTNLSAYGNSVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+IK +L A + +G ++ LY K+ E+ RG+ +N++I Y++K E
Sbjct: 327 VIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKE 386
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ L+ +M K+ PDS + +L A + +L++G +I ++ + D +V +S++N
Sbjct: 387 TVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MDEYVFNSLIN 445
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG ++ A + F++M+ K +V W+SMI+GL NG +A+ + M + EV
Sbjct: 446 MYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVA 505
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ +IQAC+ LG G +H I + + ++T+LVDMYAK G L A VF NMS
Sbjct: 506 FVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS 565
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
++V+W +LIS + +G + L +M G +P+ V++++ L AC+ G +K G
Sbjct: 566 ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEG 623
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 3/257 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H + I L+ D T L++ Y++ G L ++ VF+ + WG L+ NG
Sbjct: 20 LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGC 79
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ L +M S + +S + S L AC+ G L +G+ +HG ++ FD + V+ T+
Sbjct: 80 YQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTA 139
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++ +Y + G AR +F +M RDL+SW+ II+S +G E L F M+ PD
Sbjct: 140 LLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+++ A G++ + ++ K I+ + ++ + A+ G + A +IV
Sbjct: 200 SVLVLTVVEACGELGVLRLAKSAHGYIL-KRGIENDRFVDSSLIFMYAKCGSLRSA-EIV 257
Query: 438 DSMSTEPGLAVWVALLS 454
T + W A++S
Sbjct: 258 FENVTYRSTSTWTAMIS 274
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 301/574 (52%), Gaps = 37/574 (6%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +++ Y + + A + E + +N +I +Y R E L Y QM + +
Sbjct: 131 VPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGI 190
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD T+ LKAC +D+ G+++ G ++FV +S++++Y K G+++ A
Sbjct: 191 RPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARC 250
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI------------------- 173
FE M +D V W++MI+G G +EA + + +M+ EGI
Sbjct: 251 LFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGN 310
Query: 174 ----------------DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
D D V + + AC+ +G + G +HG +IR + V+ +
Sbjct: 311 FEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNA 370
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ MY++ +L A ++F++ NI+TW +++SG+ + L EM G EP+
Sbjct: 371 LITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPN 430
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDMYSKCGVPSCARALF 335
V++ S L CA++ L+ GK H Y +RR F L+L S++DMY++ G A+ LF
Sbjct: 431 YVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLF 490
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D + RD +++ +IA YGI G G EAL LF +M + +KPDH T ++LSA SHSGLV
Sbjct: 491 DSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVT 550
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG F+LM S Y I P +H+ACMVDL RAG + +A +++ M P A+W LL
Sbjct: 551 EGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGA 610
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H IGE A+K+L++ P++ G + L++N +A W ++A VR MR G++K P
Sbjct: 611 CRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAP 670
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
G + V+V F+++D S + +L+ L
Sbjct: 671 GCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGL 704
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 191/390 (48%), Gaps = 36/390 (9%)
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+L L G+++ + LG+ + ++ Y + +A E + W+
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I+ V NG EA+ AYK+M +GI D+ +++AC + D FG +H
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL--------- 258
L ++ V SLV MYAKTG L A +F+NM + V+W +ISG+A G+
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 259 -----------------AGS---------TLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
AG LELL M+S G + DSV+ + L AC+ IG
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIG 344
Query: 293 FLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+KLG+ IHG +R F D + ++I MYS+C A LF +++++I+WN +++
Sbjct: 345 AIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLS 404
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y EEA LF +M+ + ++P++ T AS+L + ++ G+ + ++ + +
Sbjct: 405 GYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFK 464
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+ +VD+ AR+G+V EA ++ DS+S
Sbjct: 465 DYLLLWNSLVDMYARSGKVLEAKRLFDSIS 494
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 20/282 (7%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I++ N +I +Y + A LF+ + + T+NS++ Y+ + E
Sbjct: 357 IRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEAS 416
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSM 117
L+ +M+ + P+ T L C + +L+ G+E I R+A G+ + + + +S+
Sbjct: 417 FLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRA---GFKDYLLLWNSL 473
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++Y + GK+ EA F+ + R+D V ++S+I G G+ REA+ + MKK I D
Sbjct: 474 VDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDH 533
Query: 178 VVMMGLIQACADL-----GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
V M+ ++ AC+ G F L Y I L + +VD++ + G L A
Sbjct: 534 VTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRL----EHFACMVDLFGRAGLLHKAK 589
Query: 233 HVFKNMS-RINIVTWGALISGFAQNG---LAGSTLELLMEMQ 270
+ M R + W L+ +G + E L+EM+
Sbjct: 590 EMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMR 631
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/560 (31%), Positives = 305/560 (54%), Gaps = 6/560 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEEL-----PLRGVDTYNSIIIAYSRKE 55
++K+ L V +I +Y I +A +F + R +N +I Y
Sbjct: 237 VVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNG 296
Query: 56 SPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGS 115
+ L L+ +M+ ++PD ST C +D+ G++I + G N++ V +
Sbjct: 297 CFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVET 356
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
++L++Y+KCG M + F + Q +L+ WS++I+ +G P +A++ + K E A
Sbjct: 357 ALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLA 416
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
D +++ +++AC+ L G+ +HG + + DV V ++LVD+YAK + + VF
Sbjct: 417 DSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVF 476
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
+S+ ++V+W ALISG+AQ+ A L+ +MQ P++V++ L CA + +
Sbjct: 477 LRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMT 536
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
L K +HGY +R+ +++ S+I Y+KCG + + F++M R+ +SWN II G
Sbjct: 537 LCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMG 596
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+H +E + LF +M+ + +KPDH TF ++LSA SH+G V+EG +F MV + ++P
Sbjct: 597 MHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQL 656
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ Y CMVDLL RAG + +A ++ +M P +W +LL C NH + E VA + K
Sbjct: 657 EQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFK 716
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
L P +G L++N + K E + VR ++ G+KK PG S +EV+ H FI D+
Sbjct: 717 LVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDR 776
Query: 535 SHNQYEDIVYVLKKLYLEMR 554
SH+Q ++I ++ L E++
Sbjct: 777 SHSQSDEIYAAVESLTTEIK 796
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 211/420 (50%), Gaps = 12/420 (2%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS-STFTVALKACVSLMDLKMGEEIWRKAV 103
N++I Y+ + +G+Y +M+ + V+ + F +KA L D+ G +I +
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+LG +DV V +S+L +Y KCG + +A+ FEKM DLV W++MI+G + ++
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196
Query: 164 AYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
++ M E GI + V + I +C+ L G +HG ++ L+++ + +SL++MY
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMY 256
Query: 223 AKTGHLDLASHVF-----KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
K G + A ++F K+ R N V W +ISG+ NG L L ++M G +PD
Sbjct: 257 MKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPD 316
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALF 335
++VS C++ + GK IHG + +F N+ + T+++DMY KCG +F
Sbjct: 317 YSTMVSLFSLCSESLDIAFGKQIHG-LIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIF 375
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+ Q+ +LI W+ +I++ G +AL LF + D ++L A S L
Sbjct: 376 RRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKP 435
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG L +K + +VDL A+ ++ + K+ +S + L W AL+SG
Sbjct: 436 EGMQIHGL-ATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS-QKDLVSWNALISG 493
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 279/485 (57%), Gaps = 5/485 (1%)
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC 124
+ M + V D+ T++ +K C + ++ G+ + GY +FV +++LN+YVK
Sbjct: 44 DAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKF 103
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
+ EA F++M +++V W++MI+ N +A+ M +EG+ + ++
Sbjct: 104 NLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVL 162
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+AC L + R +H I+ L DV V+++L+D+Y+K LD A VF M ++V
Sbjct: 163 RACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLV 219
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W ++I GFAQN L L M+ GF D +L S L AC + L+LG+ +H +
Sbjct: 220 VWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH- 278
Query: 305 VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
V +FD +L+L ++IDMY KCG A + F +M +D+ISW+ ++A +G+ +AL
Sbjct: 279 VLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALE 338
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF M E+ +P++ T +L A SH+GLVE+G Y+F M + + P +HY C++DLL
Sbjct: 339 LFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLL 398
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG ++EA+K++ M EP W LL C H+ + AKK+++L P+D G +
Sbjct: 399 GRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYI 458
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L+SN +A Q+WE+VA VRKTM G++K PG S +EV+ ++H FI+ D SH + E+IV
Sbjct: 459 LLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQ 518
Query: 545 VLKKL 549
L L
Sbjct: 519 RLNDL 523
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 204/384 (53%), Gaps = 21/384 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ +Y N + A LF+E+P R V ++ ++I AYS K + + L M +E V
Sbjct: 93 VNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLND-KALKCLILMFREGV 151
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP+ T++ L+AC L +L+ ++ ++ G +DVFV S+++++Y K ++ A+
Sbjct: 152 RPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALG 208
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +DLV W+S+I G N EA++ +KRMK+ G AD+ + +++AC L
Sbjct: 209 VFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLAL 268
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH + ++ + D+ + +L+DMY K G L+ A+ F M ++++W +++G
Sbjct: 269 LELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAG 326
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGYTV 305
AQNG + LEL M+ G P+ ++++ L AC+ G ++ G K + G
Sbjct: 327 LAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDP 386
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALS 364
R + +ID+ + G A L +M+ D ++W ++ + +H + + A+
Sbjct: 387 GREHYG-----CLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIY 441
Query: 365 LFLQMIETMVKPDHSTFASLLSAL 388
++IE ++P+ + LLS +
Sbjct: 442 AAKKIIE--LEPEDAGTYILLSNI 463
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 137/257 (53%), Gaps = 14/257 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT L + +I +Y +D+ +A +F+E+P R + +NSII +++ E
Sbjct: 178 IIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEA 237
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M + D +T T L+AC L L++G ++ L + D+ + ++++++
Sbjct: 238 LNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHV--LKFDQDLILNNALIDM 295
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A AF +M KD++ WS+M+ GL NG R+A++ ++ MK+ G + + +
Sbjct: 296 YCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITV 355
Query: 181 MGLIQACADLGDSRFGLSVHGY----SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHV 234
+G++ AC S GL G+ S+++ +D + L+D+ + G LD A +
Sbjct: 356 LGVLFAC-----SHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410
Query: 235 FKNM-SRINIVTWGALI 250
M + VTW L+
Sbjct: 411 IHEMECEPDSVTWRTLL 427
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 7/295 (2%)
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ A M++ G+ AD + LI+ C+ G + G VH + + + V +L++
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY K L+ A +F M N+V+W +IS ++ N L L+ L+ M G P+ +
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFT 157
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
S L AC G L + G + ++ + +++ID+YSK A +FD+M +
Sbjct: 158 YSSVLRACD--GLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPT 215
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RDL+ WN II + + G EAL+LF +M D +T S+L A + L+E GR
Sbjct: 216 RDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR-- 273
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ V K ++D+ + G +E+A M E + W +++G
Sbjct: 274 -QVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAG 326
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 300/569 (52%), Gaps = 29/569 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES---- 56
++K NL ++IA + + SA +F +P V YNSII A++ S
Sbjct: 44 VLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSL 103
Query: 57 PFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
PF + QM K + PD+ T+ LKAC L + I ++G+ D+FV +S
Sbjct: 104 PFNA---FFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNS 160
Query: 117 MLNLYVKCGK--MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+++ Y +CG ++ AM F M+ +D+V W+SMI GLV G+ + A + M D
Sbjct: 161 LIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMP----D 216
Query: 175 ADEVVMMGLIQACADLG--DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
D V ++ A G D+ F L R ++ +++V Y+K G +D+A
Sbjct: 217 RDMVSWNTMLDGYAKAGEMDTAFEL------FERMPWRNIVSWSTMVCGYSKGGDMDMAR 270
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
+F N+V W +I+G+A+ GLA EL +M+ G PD L+S L ACA+ G
Sbjct: 271 MLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESG 330
Query: 293 FLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFD----QMQSRDLISWN 347
L LGK IH R RF + + IDMY+KCG C A FD M +D++SWN
Sbjct: 331 MLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCG---CLDAAFDVFSGMMAKKDVVSWN 387
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I + +HGHGE+AL LF M++ +PD TF LL A +H+GLV EGR +F M
Sbjct: 388 SMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKV 447
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
Y I P +HY CM+DLL R G ++EA ++ SM EP + LL+ C H +
Sbjct: 448 YGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARA 507
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELH 527
V +++ KL P D G ++L+SN +A W VA VR M+ +G +K G S +EV E+H
Sbjct: 508 VCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVH 567
Query: 528 AFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
F + D+SH + +DI ++ +L ++R +
Sbjct: 568 EFTVFDQSHPKSDDIYQMIDRLVQDLRQV 596
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 16/262 (6%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H ++ +L+ D+ V L+ ++ HL A +VF ++ N+ + ++I A N
Sbjct: 40 IHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSS 99
Query: 259 AGS-TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLG 315
S +MQ G PD+ + L AC+ L L + IH + V + F ++ +
Sbjct: 100 HRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAH-VEKIGFYGDIFVP 158
Query: 316 TSVIDMYSKCGVPSC--ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
S+ID YS+CG A +LF M+ RD+++WN +I G + A LF +M +
Sbjct: 159 NSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDR- 217
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D ++ ++L + +G ++ F+ M + + ++ MV ++ G+++ A
Sbjct: 218 ---DMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVS-----WSTMVCGYSKGGDMDMA 269
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ D + + +W +++G
Sbjct: 270 RMLFDRCPVK-NVVLWTTIIAG 290
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 288/489 (58%), Gaps = 7/489 (1%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P TF + +C L G ++ R+ V G+ D F+ + ++N+Y + G ++ A
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC--ADLG 191
F++ + + + W+++ L G +E +D Y +M GI +D +++AC ++L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 192 DSRF--GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
S G +H + +R ++ V T+L+D+YAK G + A+ VF M N V+W A+
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 250 ISGFAQNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
I+ FA+N + LEL LM +++ P+SV++V+ L ACA + L+ GK IHGY +RR
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
D L + ++I MY +CG + +FD M++RD++SWN +I+ YG+HG G++A+ +F
Sbjct: 316 GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
MI P + +F ++L A SH+GLVEEG+ F+ M+SKY+I P +HYACMVDLL R
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
A ++EA+K+++ M EPG VW +LL C H + E+ + + +L P + G + L+
Sbjct: 436 ANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLL 495
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
++ +A + W E V K + G++K+PG S +EV ++++F+ D+ + Q E+I +L
Sbjct: 496 ADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555
Query: 547 KKLYLEMRA 555
KL EM+A
Sbjct: 556 VKLSNEMKA 564
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 153/290 (52%), Gaps = 6/290 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y I ARK+F+E R + +N++ A + E+L LY QM +
Sbjct: 118 KLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPS 177
Query: 75 DSSTFTVALKACV----SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV S+ L+ G+EI + GY ++ V +++L++Y K G ++ A
Sbjct: 178 DRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYA 237
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F M K+ V WS+MI N P +A++ ++ M E D+ + V M+ ++QACA
Sbjct: 238 NSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACA 297
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +RR L+ + V +L+ MY + G + + VF NM ++V+W +
Sbjct: 298 GLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNS 357
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
LIS + +G +++ M G P +S ++ L AC+ G ++ GK
Sbjct: 358 LISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 119/239 (49%), Gaps = 4/239 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DVR 73
++ +Y + A +F +P + +++++I +++ E P + L L+ M+ E D
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSV 283
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+S T L+AC L L+ G+ I + G + + V ++++ +Y +CG++
Sbjct: 284 PNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRV 343
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M+ +D+V W+S+I+ +G ++A+ ++ M +G + + ++ AC+ G
Sbjct: 344 FDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLV 403
Query: 194 RFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G + + ++ ++ ++ +VD+ + LD A + ++M WG+L+
Sbjct: 404 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLL 462
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
Q+ G L+ + + C P + + +CAQ L G +H V FD +
Sbjct: 55 QSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPF 114
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L T +I+MY + G AR +FD+ + R + WN + + + G G+E L L++QM
Sbjct: 115 LATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIG 174
Query: 374 VKPDHSTFASLLSALSHSGL----VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ D T+ +L A S L +++G+ + ++ + ++D+ A+ G
Sbjct: 175 IPSDRFTYTFVLKACVVSELSVSPLQKGKE-IHAHILRHGYEANIHVMTTLLDVYAKFGS 233
Query: 430 VEEALKIVDSMSTEPGLAVWVALLS 454
V A + +M T+ W A+++
Sbjct: 234 VSYANSVFCAMPTK-NFVSWSAMIA 257
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 314/556 (56%), Gaps = 16/556 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KED 71
V I++Y D+ S+R++F+ R ++ +N++I Y + + E + L+ + I ++
Sbjct: 258 VSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKE 317
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ D TF +A A L +++G + + + EL + + +S++ +Y +CG +
Sbjct: 318 IVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFREL----PIVIINSLMVMYSRCGFV 373
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
++ F M+ +D+V W++MI+ V NG E + M+K+G D + + L+ A
Sbjct: 374 QKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAA 433
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVT 245
++L + G HG+ IR+ + + + + L+DMYAK+G + ++ +F+ + + T
Sbjct: 434 SNLRNKEIGKQTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQAT 492
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++ISG+ QNG T + +M P++V++ S L AC+Q+G + LGK +HG+++
Sbjct: 493 WNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSI 552
Query: 306 RRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R++ D N+ + ++++DMYSK G A +F Q + R+ +++ +I YG HG GE A+S
Sbjct: 553 RQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAIS 612
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LFL M E +KPD F ++LSA S+SGLV+EG F+ M Y IQP+ +HY C+ D+L
Sbjct: 613 LFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDML 672
Query: 425 ARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLG 481
R G V EA + V + E +A +W +LL C H + + E V++++ KL+ + G
Sbjct: 673 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERLAKLDKGKNFSG 732
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
L+SN +A EQ W+ V VRK MR+ G+KK G S +EV G ++ F+ D+ H +
Sbjct: 733 YEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSGIEVAGHVNCFVSRDQEHPHSGE 792
Query: 542 IVYVLKKLYLEMRAIS 557
I + L MR S
Sbjct: 793 IYDAIDGLAKNMRGDS 808
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 231/469 (49%), Gaps = 23/469 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VRPDSSTFTVALKAC 86
AR+LF+ +P +N+III + P E L Y++M K + D+ T++ LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKAC 117
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC----------GKMNEAMVAFEK 136
+LK G+ + + + V +S++N+YV C + + F+
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDN 177
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M+RK++V W+++I+ V G+ EA + M + I V + + A A +
Sbjct: 178 MRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKA 237
Query: 197 LSVHGYSIR--RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G ++ D+ V +S + MYA+ G L+ + VF + NI W +I +
Sbjct: 238 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYV 297
Query: 255 QNGLAGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNL 312
QN ++EL +E + S D V+ + A A + + ++LG+ HG+ + F + +
Sbjct: 298 QNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPI 357
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
V+ S++ MYS+CG + +F M+ RD++SWN +I+++ +G +E L L +M +
Sbjct: 358 VIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 417
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
K D+ T +LLSA S+ E G+ ++ + IQ E + ++D+ A++G +
Sbjct: 418 GFKIDYITVTALLSAASNLRNKEIGKQTHGFLI-RQGIQ-FEGMNSYLIDMYAKSGLIRI 475
Query: 433 ALKIVD-SMSTEPGLAVWVALLSG----CHNHKKFSIGEKVAKKVLKLN 476
+ K+ + S E A W +++SG H + F + K+ ++ ++ N
Sbjct: 476 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPN 524
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 17/246 (6%)
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVS 280
+ G+ LA +F + + V W +I GF N L L M+ + D+ +
Sbjct: 50 CQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYT 109
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKC-GVP---------S 329
S L ACA+ LK GK++H + +R + + V+ S+++MY C P
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYD 169
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
R +FD M+ +++++WN +I+ Y G EA F M+ +KP +F ++ A++
Sbjct: 170 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVA 229
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
S +++ ++ LM+ K + + + + + + A G++E + ++ DS E +
Sbjct: 230 TSRSIKKANVFYGLML-KLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDS-CVERNIE 287
Query: 448 VWVALL 453
VW ++
Sbjct: 288 VWNTMI 293
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 295/537 (54%), Gaps = 1/537 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY +DI +A F E + V +N +++AY + ++ QM E++
Sbjct: 411 GALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 470
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ LK C+ L DL++GE+I + ++ + + +V S ++++Y K GK++ A
Sbjct: 471 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDI 530
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ KD+V W++MI G +A+ +++M GI +DEV + + ACA L
Sbjct: 531 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 590
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G +H + + D+ Q +LV +Y+K G+++ A F+ + + W AL+SGF
Sbjct: 591 KEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGF 650
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q+G L + M G + ++ + SA+ A ++ +K GK +H + +D
Sbjct: 651 QQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 710
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I MY+KCG S A+ F ++ ++ +SWN +I +Y HG G EAL F QMI +
Sbjct: 711 EVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHS 770
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P+H T +LSA SH GLV++G +F+ M ++Y + P +HY C+VD+L RAG +
Sbjct: 771 NVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSR 830
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + M EP VW LLS C HK IGE A +L+L P+D + L+SN +A+
Sbjct: 831 AKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 890
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+KW+ R+ M++ G+KK PG S +EV +H+F + D++H ++I K L
Sbjct: 891 CRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDL 947
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 222/443 (50%), Gaps = 4/443 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y K D+ A K+F+E+P R + T+N +I + + +V L+ +M+ E+V P
Sbjct: 108 KLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTP 167
Query: 75 DSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ TF+ L+AC + + E+I + + G G V + +++LY + G ++ A
Sbjct: 168 NEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRV 227
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + KD W +MI+GL N EA+ + M GI ++ AC +
Sbjct: 228 FDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 287
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG ++ + D V +LV +Y G L A H+F NMS+ + VT+ LI+G
Sbjct: 288 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGL 347
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+Q G +EL MQ G EPDS +L S ++AC+ G L G+ +H YT + F N
Sbjct: 348 SQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASND 407
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +++++Y+KC A F + + +++ WNV++ +YG+ + +F QM
Sbjct: 408 KIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 467
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P+ T+ S+L G +E G ++ K Q + ++D+ A+ G+++
Sbjct: 468 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTSFQLNAYVCSVLIDMYAKLGKLDT 526
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A I+ + + + W +++G
Sbjct: 527 AWDILIRFAGKD-VVSWTTMIAG 548
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 222/445 (49%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY ++SA +F + R TYN++I S+ + + L+ +M + + PD
Sbjct: 312 LVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPD 371
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + AC S L G+++ +LG+ ++ + ++LNLY KC + A+ F
Sbjct: 372 SNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + +++V W+ M+ R + +++M+ E I ++ +++ C LGD
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 491
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ L+ V + L+DMYAK G LD A + + ++V+W +I+G+ Q
Sbjct: 492 GEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 551
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
L +M G D V L +A+ ACA + LK G+ IH V F +L
Sbjct: 552 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 611
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++ +YSKCG A F+Q ++ D I+WN +++ + G+ EEAL +F +M +
Sbjct: 612 QNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGI 671
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
++ TF S + A S + +++G+ ++ TE A ++ + A+ G + +A
Sbjct: 672 DSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-IISMYAKCGSISDAK 730
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K +S + ++ W A+++ H
Sbjct: 731 KQFLELSMKNEVS-WNAMINAYSKH 754
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 224/443 (50%), Gaps = 7/443 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+ L L+ ++ ++I S+ E E + L+ M + P
Sbjct: 211 LIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPT 270
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ L AC + L++GE++ ++LG+ +D +V +++++LY G + A F
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFS 330
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D V ++++INGL G +A++ +KRM+ +G++ D + L+ AC+ G
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+ + + K++ +L+++YAK ++ A + F N+V W ++ +
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
++ + +MQ P+ + S L C ++G L+LG+ IH ++ F N +
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYV 510
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G A + + +D++SW +IA Y + ++AL+ F QM++ +
Sbjct: 511 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 570
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQ-PTEKHYACMVDLLARAGEVEE 432
+ D + +SA + ++EG+ VS + P + +V L ++ G +EE
Sbjct: 571 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSKCGNIEE 627
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + +A W AL+SG
Sbjct: 628 AYLAFEQTEAGDNIA-WNALVSG 649
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 200/398 (50%), Gaps = 19/398 (4%)
Query: 1 MIKTN--LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKT+ L+AY SV +I +Y + +A + + V ++ ++I Y++
Sbjct: 499 IIKTSFQLNAYVCSV--LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 556
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L + QM+ +R D T A+ AC L LK G++I +A G+ +D+ ++++
Sbjct: 557 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 616
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
LY KCG + EA +AFE+ + D + W+++++G +G EA+ + RM +EGID++
Sbjct: 617 TLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNF 676
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++A ++ + + G VH + + + +V +++ MYAK G + A F +
Sbjct: 677 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLEL 736
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
S N V+W A+I+ ++++G L+ +M P+ V+LV L AC+ IG + K
Sbjct: 737 SMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD--K 794
Query: 299 SIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASY 353
I + ++ L V+DM ++ G+ S A+ +M D + W ++++
Sbjct: 795 GIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSAC 854
Query: 354 GIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+H + GE A L++ +P+ S LLS L
Sbjct: 855 VVHKNMEIGEFAAHHLLEL-----EPEDSATYVLLSNL 887
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 14/315 (4%)
Query: 172 GIDADEVVMMGLIQACADL-GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
GI + + L++ C G G +H ++ + + + L+D Y G LD
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC-- 288
A VF M I TW +I A L+G L M + P+ + L AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ F + + IH + + + ++ +ID+YS+ G AR +FD + +D SW
Sbjct: 182 GSVAF-DVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I+ + EA+ LF M + P F+S+LSA +E G L++
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL-- 298
Query: 408 YKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
K+ + Y C +V L G + A I +MS + + L++G + G
Sbjct: 299 -KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAV-TYNTLINGL---SQCGYG 353
Query: 466 EKVAKKVLKLNPDDL 480
EK + ++ D L
Sbjct: 354 EKAMELFKRMQLDGL 368
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVRR-FDF 310
F +NG+ +++CG P+ +L L C + G L G+ +H ++ FD
Sbjct: 50 FQENGIDS--------VENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDN 101
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N L ++D Y G A +FD+M R + +WN +I + LF +M+
Sbjct: 102 NACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMV 161
Query: 371 ETMVKPDHSTFASLLSALS------------HSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
V P+ TF+ +L A H+ ++ +G L S P
Sbjct: 162 NENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQG-----LGKSTIVCNP------ 210
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++DL +R G V+ A ++ D + + + WVA++SG
Sbjct: 211 -LIDLYSRNGFVDRARRVFDGLYLKDH-SSWVAMISG 245
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 300/560 (53%), Gaps = 5/560 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + S+ +LFE +P R +NS+I AY+ E + L+ +M E V+ D
Sbjct: 296 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 355
Query: 76 SSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + L C L L G+ + ++ G D +G+++L++Y + + F
Sbjct: 356 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 415
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M+ D++ W++MI L N +A + ++RM++ I + ++ ++ AC D+
Sbjct: 416 DRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLD 475
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG S+HGY ++ + ++ ++T+L DMY G A +F+ ++++W A+I+ +
Sbjct: 476 FGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYV 535
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---FDFN 311
+N A L L M S EP+SV++++ L + + L G+S+H Y RR +
Sbjct: 536 KNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLD 594
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L L + I MY++CG A +F + R++ISWN +IA YG++G G +A+ F QM+E
Sbjct: 595 LSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLE 654
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+P+ TF S+LSA SHSG +E G F MV + + P HY+C+VDLLAR G ++
Sbjct: 655 DGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCID 714
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + +DSM EP +VW ALLS C + + + +K+ KL P + G + L+SN +A
Sbjct: 715 EAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYA 774
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W EV +R +++ G++K PG S + V ++H F D+SH Q + I L L
Sbjct: 775 TAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLS 834
Query: 552 EMRAISSWLQGHMEEHEEHD 571
MR HEE D
Sbjct: 835 SMRETGYDPDLRWVFHEEDD 854
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 229/427 (53%), Gaps = 5/427 (1%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF+ + +R + ++N++I Y F+ L L+ QM+ ++V+ D T VA++AC L
Sbjct: 211 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 270
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
LK+G++I + A++ + D+++ +++LN+Y G + + FE + +D W+SMI+
Sbjct: 271 LKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISA 330
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF-GLSVHGYSIRRHLNL 210
G EA+D + RM+ EG+ DE ++ ++ C +L G S+H + I+ + +
Sbjct: 331 YAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRI 390
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D + +L+ MY + ++ +F M ++I++W +I A+N L EL M+
Sbjct: 391 DASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMR 450
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
+P+S +++S L AC + L G+SIHGY ++ + N L T++ DMY CG +
Sbjct: 451 ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEA 510
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR LF+ RDLISWN +IASY + +AL LF +MI + +P+ T ++LS+ +
Sbjct: 511 TARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFT 569
Query: 390 HSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
H + +G+ + + + + + + AR G ++ A I ++ +
Sbjct: 570 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKR-NIIS 628
Query: 449 WVALLSG 455
W A+++G
Sbjct: 629 WNAMIAG 635
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 210/402 (52%), Gaps = 9/402 (2%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NS+I + ++ +L Y QM V P+++T + LKAC + ++ G+ I R
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+DV VG+++++ Y KCG + +A F+ M +D+V W++M+ G V G EA+
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMY 222
+ M +E + + M+ L+ AC + R G VHGY +R + + + V T+L+ Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+ + + +F M NIV+W A+ISG+ G LEL ++M + D V+++
Sbjct: 201 LRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
A+ ACA++G LKLGK IH + +F+F +L + ++++MYS G + LF+ + +
Sbjct: 260 VAVQACAELGSLKLGKQIHQLAI-KFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 318
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH--SGLVEEGR 398
RD WN +I++Y G EEA+ LF++M VK D T +LS SGL++
Sbjct: 319 RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKS 378
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
++ S +I + + ++ + VE KI D M
Sbjct: 379 LHAHVIKSGMRIDASLGN--ALLSMYTELNCVESVQKIFDRM 418
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 194/376 (51%), Gaps = 15/376 (3%)
Query: 7 SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFEVLGLY 64
++ GN+ ++++Y N + S +K+F+ + +GVD ++N++I+A +R + L+
Sbjct: 392 ASLGNA---LLSMYTELNCVESVQKIFDRM--KGVDIISWNTMILALARNTLRAQACELF 446
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC 124
+M + +++P+S T L AC + L G I ++ + + +++ ++Y+ C
Sbjct: 447 ERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNC 506
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G A FE +DL+ W++MI V N Q +A+ + RM E + + V ++ ++
Sbjct: 507 GDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVL 565
Query: 185 QACADLGDSRFGLSVHGYSIRR--HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+ L G S+H Y RR L LD+ + + + MYA+ G L A ++FK + + N
Sbjct: 566 SSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRN 625
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
I++W A+I+G+ NG + +M GF P+ V+ VS L AC+ GF+++G +
Sbjct: 626 IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFH 685
Query: 303 YTVRRFDFN--LVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHG 359
V+ F+ LV + ++D+ ++ G AR D M D W +++S +
Sbjct: 686 SMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDA 745
Query: 360 EEALSLF--LQMIETM 373
++A ++F L +E M
Sbjct: 746 KQAKTIFEKLDKLEPM 761
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 14/331 (4%)
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+Q KD W+S+I + + AY +M+ G+ + + +++ACA
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H L DV+V T++VD Y K G ++ A VF MS ++V W A++ G+
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
G + L+ EM P+S ++V+ LLAC L+LG+ +HGY +R FD N
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ T++I Y + + LFD M R+++SWN +I+ Y G +AL LF+QM+
Sbjct: 192 VATALIGFYLRFDM-RVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVE 431
VK D T + A + G ++ G+ L + K + E Y ++++ + G +E
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAI---KFEFVEDLYILNALLNMYSNNGSLE 307
Query: 432 EALKIVDSMSTEPGLAVWVALLS-----GCH 457
+ ++ +S+ +W +++S GCH
Sbjct: 308 SSHQLFESVPNRDA-PLWNSMISAYAAFGCH 337
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 295/582 (50%), Gaps = 39/582 (6%)
Query: 7 SAYGNSVGRIIALY------GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
SA + V +++A Y G + AR++F+ +P YNS+I AYS P E
Sbjct: 32 SAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEA 91
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +++ + P+ T LKAC + A++LGY VFVG+++L+
Sbjct: 92 LCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHS 151
Query: 121 YVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
G + ++ F +M +++V W++MI G G+ EA ++ M+++G+ AD
Sbjct: 152 SASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFT 211
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL----------- 228
+ L+ C+ G+ G VH + + +D+ + +LVDMY K G L
Sbjct: 212 FVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMP 271
Query: 229 --------------------DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D A F+ M NI++W A+IS + Q G TL L
Sbjct: 272 IKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNR 331
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGV 327
M+S G PD V+L L Q G L G+ IH Y F D + + S+IDMY++CG
Sbjct: 332 MKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQ 391
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ +LF +M +++ ISWNVII + +HG +EA+ F M+ PD TF LLSA
Sbjct: 392 VDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSA 451
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH GL+E+G+Y+F M Y ++P +HYACMVDLL R G + +A+ ++ M +P +
Sbjct: 452 CSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVV 511
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW AL+ C H IG+ K++L+L + G+ L+SN ++WE++ +RK MR
Sbjct: 512 VWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMR 571
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
G KK G S +E+N +H F +ED H I + +L
Sbjct: 572 DRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQIYAAVDQL 613
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 291/524 (55%), Gaps = 2/524 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LFEE+ + T+N++I Y + E + L+ +M + +P TF+ LKA V L D
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHD 259
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+G+++ +V G+ D VG+ +L+ Y K ++ E F +M D V ++ +I+
Sbjct: 260 FALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISS 319
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
Q E+++ ++ M+ G D ++ A+L + G VH +I +
Sbjct: 320 YSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSI 379
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V SLVDMYAK D A +FK++S+ + V+W ALISG+ Q GL G+ L+L +M+
Sbjct: 380 LHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRG 439
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSC 330
D + + L A A L LGK +H + +R + N+ G+ ++DMY+KCG
Sbjct: 440 ANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 499
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +F++M R+ +SWN +I++Y +G GE A+ F +MI++ ++PD + +L A SH
Sbjct: 500 AVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSH 559
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G VE+G +F M Y I P +KHYACM+DLL R G EA K++D M EP +W
Sbjct: 560 CGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 619
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
++L+ C +K S+ E+ A+++ + D + +SN +A KWE V V+K MR+
Sbjct: 620 SVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRER 679
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
G+KKVP YS VEVN ++H F D++H ++IV + +L E+
Sbjct: 680 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEI 723
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 233/479 (48%), Gaps = 13/479 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I+ Y D+ SAR LF+ +P R V T+ ++ Y+ E L+ QM +
Sbjct: 77 STNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSC 136
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF--VGSSMLNLYVKCGKMNE 129
PD TFT L C + ++ AV+LG+ ++F V + +L Y + +++
Sbjct: 137 TLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDL 196
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A V FE++ KD V ++++I G +G EA+ + +M++ G + G+++A
Sbjct: 197 ACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVG 256
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L D G +HG S+ + D V ++ Y+K + ++F M ++ V++ +
Sbjct: 257 LHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVV 316
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRF 308
IS ++Q +L L EMQ GF+ + + L A + L++G+ +H V
Sbjct: 317 ISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATA 376
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY---GIHGHGEEALSL 365
D L +G S++DMY+KC + A +F + R +SW +I+ Y G+HG G L L
Sbjct: 377 DSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAG---LKL 433
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M ++ D STFA++L A + + G+ ++ ++ + +VD+ A
Sbjct: 434 FTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYA 492
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGI 482
+ G +++A+++ + M ++ W AL+S ++ K+++ L PD + I
Sbjct: 493 KCGSIKDAVQVFEEMPDRNAVS-WNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSI 550
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 194/397 (48%), Gaps = 14/397 (3%)
Query: 12 SVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG +I+ Y + ++ R LF E+P +YN +I +YS+ E E L L+ +M
Sbjct: 280 SVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCM 339
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ F L +L L++G ++ +A+ + + VG+S++++Y KC +EA
Sbjct: 340 GFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEA 399
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
+ F+ + ++ V W+++I+G V G + + +M+ + AD+ +++A A
Sbjct: 400 ELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGF 459
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G +H + IR +V + LVDMYAK G + A VF+ M N V+W ALI
Sbjct: 460 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 519
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGY 303
S +A NG + + +M G +PDSVS++ L+AC+ GF++ G I+G
Sbjct: 520 SAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGI 579
Query: 304 TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEA 362
T ++ + +L D+ + G + A L D+M D I W+ ++ + I+ + A
Sbjct: 580 TPKKKHYACML-----DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLA 634
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
Q+ D + + S+ + + +G E R+
Sbjct: 635 ERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRH 671
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 46/284 (16%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS ++ +Y A +F+ L R ++ ++I Y +K L L+ +M
Sbjct: 383 GNS---LVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRG 439
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
++R D STF LKA L +G+++ + G +VF GS ++++Y KCG + +
Sbjct: 440 ANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 499
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A+ FE+M ++ V W+++I+ NG A+ A+ +M + G+ D V ++G++ AC
Sbjct: 500 AVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIAC-- 557
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT---- 245
+ G ++ + F+ MS I +T
Sbjct: 558 ---------------------------------SHCGFVEQGTEFFQAMSPIYGITPKKK 584
Query: 246 -WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ ++ +NG +L+ EM FEPD + S L AC
Sbjct: 585 HYACMLDLLGRNGRFAEAEKLMDEMP---FEPDEIMWSSVLNAC 625
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N V ++I Y K G S AR LFD M R +++W +++ Y + H +EA LF QM
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 371 ETMVKPDHSTFASLL 385
+ PD+ TF +LL
Sbjct: 134 RSCTLPDYVTFTTLL 148
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 282/475 (59%), Gaps = 7/475 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS+T++ +K C+S + G I R G+ +F+ + ++N+YVK +N+A F
Sbjct: 12 DSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLF 71
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +++++ W++MI+ ++A++ M ++G+ + +++AC + D R
Sbjct: 72 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVR 131
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H I+ L DV V+++L+D++AK G + A VF M + + W ++I GFA
Sbjct: 132 M---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 188
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QN + LEL M+ GF + +L S L AC + L+LG H + V+ +D +L+L
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-YDQDLIL 247
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY KCG AR +F+QM+ RD+I+W+ +I+ +G+ +EAL LF M +
Sbjct: 248 NNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGT 307
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP++ T +L A SH+GL+E+G Y+F M Y I P +HY CM+DLL +AG++++A+
Sbjct: 308 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAV 367
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+++ M EP W LL C + + E AKKV+ L+P+D G + ++SN +A Q
Sbjct: 368 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQ 427
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW+ V +RK MR G+KK PG S +EVN ++HAFI+ D+SH Q IV V KKL
Sbjct: 428 KWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQ---IVEVNKKL 479
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 191/348 (54%), Gaps = 18/348 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y N + A +LF+++P R V ++ ++I AYS+ + + L L M+++ V
Sbjct: 51 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGV 110
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP+ T++ L+AC + D++M + ++ G +DV+V S++++++ K G+ +A+
Sbjct: 111 RPNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALS 167
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M D + W+S+I G N + A++ +KRMK+ G A++ + +++AC L
Sbjct: 168 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 227
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ H + ++ + D+ + +LVDMY K G L+ A VF M +++TW +ISG
Sbjct: 228 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGYTV 305
AQNG + L+L M+S G +P+ +++V L AC+ G L+ G K ++G
Sbjct: 286 LAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINP 345
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
R + +ID+ K G A L ++M+ D ++W ++ +
Sbjct: 346 GREHYG-----CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 305/545 (55%), Gaps = 9/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SA +LF +P R ++ +++ S+ + L + M + V P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A +A +L G ++ V LG+ ++FV S++ ++Y KCG ++EA F+
Sbjct: 122 RFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFD 181
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+M +KD V W++MI+G NG AV +++ MK+EG + AD+ V ++ A L D
Sbjct: 182 QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGW 241
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK-NMSRINIVTWGALISGF 253
S+H + L+V V+ +L+DMYAK+ ++ AS V K + N+V+ ++I G+
Sbjct: 242 LSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGY 301
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR----RFD 309
+ L + +E++ G EP+ + S + CA L+ G +H ++ R
Sbjct: 302 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 361
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
F +G++++DMY KCG+ S + LF++++ R I+WN +I + HGHG EA+ F +M
Sbjct: 362 F---VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM 418
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
I + ++P+H F SLL+A SH+GLV+EG +F M + I+P E+HY+C++D RAG
Sbjct: 419 IYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGR 478
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA K + M +P W +LL C +GE A+ ++KL P + GIH +S
Sbjct: 479 LDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGI 538
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +WE+V VRK MR S +KK+PG+S V+ N + H F ED SH Q +DI L++L
Sbjct: 539 YASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEEL 598
Query: 550 YLEMR 554
++
Sbjct: 599 TTRIK 603
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 195/415 (46%), Gaps = 21/415 (5%)
Query: 64 YNQMIKEDVRPDSST---FTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLN 119
+ Q + PD++T L++C DL+ G + + V G F+ + ++
Sbjct: 5 WGQRLWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLIT 64
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y C + A+ F M R++ V W+++++GL N +A+ A+ M++ G+
Sbjct: 65 MYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFA 124
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ +A A LG G +H +R + ++ V ++L DMY+K G L A VF M
Sbjct: 125 LSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMP 184
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKLGK 298
+ + V W A+I G+A+NG + + +M+ G D S L A + L K
Sbjct: 185 QKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSK 244
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKC-GVPSCARALFDQMQSRDLISWNVIIASYGIH 356
SIH + F+ + + ++IDMY+K V S +R L D WNV+ + I
Sbjct: 245 SIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL-----KIDPGGWNVVSGTSMID 299
Query: 357 GH-----GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
G+ EEAL +++++ V+P+ TF+S++ + L+E+G V K +
Sbjct: 300 GYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQ-LHAQVIKTDLI 358
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSI 464
+ +VD+ + G + ++++ + + +A W A+++ H H + +I
Sbjct: 359 RDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAI 412
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 298/541 (55%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + A +F + + ++ +N+++ AY+ + + L L+ M ++ V PD
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + + C L G+ + + + + + S++L LY KCG +A + F+
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACADLGDS 193
M+ KD+V W S+I+GL NG+ +EA+ + MK + + D +M + ACA L
Sbjct: 433 SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
RFGL VHG I+ L L+V V +SL+D+Y+K G ++A VF +MS N+V W ++IS +
Sbjct: 493 RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
++N L +++L M S G PDSVS+ S L+A + L GKS+HGYT+R +
Sbjct: 553 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 612
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY KCG A +F +MQ + LI+WN++I YG HG ALSLF +M +
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKA 672
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD TF SL+SA +HSG VEEG+ F+ M Y I+P +HYA MVDLL RAG +EE
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + +M E ++W+ LLS H +G A+K+L++ P+ + + N +
Sbjct: 733 AYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYME 792
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E A + M++ G+ K PG S +EV+ + F S +I VL +L
Sbjct: 793 AGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSN 852
Query: 553 M 553
M
Sbjct: 853 M 853
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 236/471 (50%), Gaps = 16/471 (3%)
Query: 27 VSARKLFEELPLR-GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A ++F E+ + V +N +I+ + L LY V+ S++FT AL A
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGA 281
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C + G +I V++G ND +V +S+L++Y KCG + EA F + K L W
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++M+ N A+D + M+++ + D + +I C+ LG +G SVH +
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
R + ++++L+ +Y+K G A VFK+M ++V WG+LISG +NG L++
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 266 LMEMQ--SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
+M+ +PDS + S ACA + L+ G +HG ++ N+ +G+S+ID+Y
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SKCG+P A +F M + ++++WN +I+ Y + E ++ LF M+ + PD +
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQ---PTEKHYA-CMVDLLARAGEVEEALKIVD 438
S+L A+S + + +G+ + Y ++ P++ H ++D+ + G + A I
Sbjct: 582 SVLVAISSTASLLKGK-----SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGIHALVS 487
M L W ++ G +H + ++ K +PDD+ +L+S
Sbjct: 637 KMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF LKAC +L +L G+ I V LG+ D F+ +S++N+YVKCG ++ A+ F+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 138 QR-------KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
+ +D+ W+SMI+G + +E V ++RM G+ D + ++
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 191 GDSRF--GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWG 247
G+ R G +HG+ +R L+ D ++T+L+DMY K G A VF + + N+V W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+I GF +G+ S+L+L M ++ + S S AL AC+Q G+ IH V+
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 308 FDFN-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
N + TS++ MYSKCG+ A +F + + L WN ++A+Y + +G AL LF
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
M + V PD T ++++S S GL G+ + K IQ T + ++ L ++
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS-VHAELFKRPIQSTSTIESALLTLYSK 420
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
G +A + SM E + W +L+SG + KF K A KV DD
Sbjct: 421 CGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKF----KEALKVFGDMKDD 468
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 211/432 (48%), Gaps = 13/432 (3%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM--GE 96
R V +NS+I Y + E +G + +M+ VRPD+ + ++ + + + G+
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK-DLVCWSSMINGLVFN 155
+I + D F+ ++++++Y K G +A F +++ K ++V W+ MI G +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G ++D Y K + G + AC+ +S FG +H ++ L+ D V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
TSL+ MY+K G + A VF + + W A+++ +A+N S L+L M+
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
PDS +L + + C+ +G GKS+H +R + ++++ +YSKCG A +
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI--ETMVKPDHSTFASLLSALSHSG 392
F M+ +D+++W +I+ +G +EAL +F M + +KPD S+ +A +
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG-- 488
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+E R+ + S K + + ++DL ++ G E ALK+ SMSTE + W
Sbjct: 489 -LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWN 546
Query: 451 ALLSGCHNHKKF 462
+++S C++
Sbjct: 547 SMIS-CYSRNNL 557
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/531 (36%), Positives = 299/531 (56%), Gaps = 11/531 (2%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
+I AR+LF+ +P R + T+NSII Y + E + +Y MI +V PD T + K
Sbjct: 96 EIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFK 155
Query: 85 ACVSLMDLKMGEEIWRK---AVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
A DL + +E R AV LG ++VFVGS+++++YVK GK EA + ++++ K
Sbjct: 156 A---FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 212
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D+V +++I G G+ EAV A++ M E + +E ++ +C +L D G +H
Sbjct: 213 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 272
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G ++ + QTSL+ MY + +D + VFK + N VTW +LISG QNG
Sbjct: 273 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREE 332
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
+ L +M +P+S +L SAL C+ + + G+ +HG + FD + G+ +I
Sbjct: 333 TALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLI 392
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
++Y KCG AR +FD + D+IS N +I SY +G G EAL LF +MI ++P+
Sbjct: 393 ELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDV 452
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T S+L A ++SGLVEEG FD K KI T HYACMVD+L RAG +EEA ++
Sbjct: 453 TVLSVLLACNNSGLVEEGCELFD-SFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITE 511
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
+ T P L +W LLS C H+K + E++ +K+L++ P D G L+SN +A KW+ V
Sbjct: 512 V-TNPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRV 570
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK-SHNQYEDIVYVLKKL 549
++ M++ +KK P S VE++ E H F+ D SH E I+ L++L
Sbjct: 571 IEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEEL 621
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 204/420 (48%), Gaps = 9/420 (2%)
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
I D + TF+ L+ C+ + + I + ++ G+ ++ GS +++ +KCG++
Sbjct: 39 ITCDSLTTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVEL-SGSKLVDASLKCGEI 97
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A F+ M + +V W+S+I + + + +EAV+ Y+ M + DE + + +A
Sbjct: 98 GYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAF 157
Query: 188 ADLGDSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+DL + HG ++ L + +V V ++LVDMY K G A V + ++V
Sbjct: 158 SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 217
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
ALI G++Q G ++ M +P+ + S L++C + + GK IHG V+
Sbjct: 218 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 277
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F+ L TS++ MY +C + + +F ++ + ++W +I+ +G E AL
Sbjct: 278 SGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIE 337
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M+ VKP+ T +S L S+ + EEGR + VSKY + + +++L
Sbjct: 338 FRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGI-VSKYGFDRDKYAGSGLIELYG 396
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN---HKKFSIGEKVAKKVLKLNPDDLGI 482
+ G + A + D++S +++ + S N + + E++ L L P+D+ +
Sbjct: 397 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMIN--LGLQPNDVTV 454
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 265/480 (55%), Gaps = 20/480 (4%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK--CGKMNEAMVA- 133
++ ALK+C +L +G + A+ G D F +++LNLY K C ++ V
Sbjct: 52 ASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTS 111
Query: 134 ----------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
F++M +D+V W++++ G G+ EA+ ++M +EG D
Sbjct: 112 VGGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDS 171
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ ++ A+ D + G VHG+++R + DV V +SL+DMYA D + VF N
Sbjct: 172 FTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDN 231
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ + + W ++++G AQNG L + M G P V+ S + C + L+ G
Sbjct: 232 LPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFG 291
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H Y +R F+ N+ + +S+IDMY KCG S A +FD+M S D++SW +I Y +H
Sbjct: 292 KQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALH 351
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G EAL LF +M KP+H TF ++L+A SH+GLV++G +F M Y I PT +H
Sbjct: 352 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEH 411
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
A + D+L RAGE++EA + M +P +VW LL C HK + E+VAKK+++L
Sbjct: 412 CAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELE 471
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P +G H ++SN ++ +W E A +RK+MRK GMKK P S +EV +LH F+ D+SH
Sbjct: 472 PRSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSH 531
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 152/277 (54%)
Query: 21 GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFT 80
G + S RK+F+E+ R V ++N++++ + + E L L +M +E RPDS T +
Sbjct: 116 GSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLS 175
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
L D+K G E+ AV G+ NDVFVGSS++++Y C + + ++ F+ + +
Sbjct: 176 SVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 235
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D + W+S++ G NG EA+ ++RM + G+ V LI C +L RFG +H
Sbjct: 236 DPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLH 295
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
Y IR +V + +SL+DMY K G + +A H+F M ++V+W A+I G+A +G A
Sbjct: 296 AYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAR 355
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
L L M+ +P+ ++ ++ L AC+ G + G
Sbjct: 356 EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKG 392
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 287/510 (56%), Gaps = 3/510 (0%)
Query: 47 IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
+I Y+ + ++ +M+ E++ P++ T + LKAC + L G + A++ G
Sbjct: 64 MIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123
Query: 107 YGNDVFVGSSMLNLYVKCG-KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
++V ++++++Y C M++A + F + K+ V W+++I G + +
Sbjct: 124 LDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVF 183
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
++M E ++ + ++AC +G FG +H + ++ V S++DMY +
Sbjct: 184 RQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC 243
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
A+ F M++ +++TW LI+G+ ++ S L + M+S GF P+ + S +
Sbjct: 244 SCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTES-LYVFSMMESEGFSPNCFTFTSIM 302
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
ACA + FL G+ IHG +RR D NL L ++IDMYSKCG + + +F M RDL+
Sbjct: 303 AACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLV 362
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SW ++ YG HG+GEEA+ LF +M+ + ++PD F ++LSA SH+GLV+EG +F LM
Sbjct: 363 SWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLM 422
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
V Y I P ++ Y C+VDLL RAG+VEEA ++++SM +P VW L C H ++
Sbjct: 423 VGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNL 482
Query: 465 GEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
G+ A ++L L P G + ++SN +A + KW E A +RK M++ G KK G S VEV
Sbjct: 483 GKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGN 542
Query: 525 ELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+++F++ D+ ++ E I VL+ L M+
Sbjct: 543 HVYSFVVGDEVGSKIEGIYQVLENLIGHMK 572
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 215/454 (47%), Gaps = 54/454 (11%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F + L+ ++ ++I Y+ ++ + L ++ QM+ E+V + +F++A++AC S
Sbjct: 148 ACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTS 207
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ GE++ + G+ +++ V +S+L++Y +C +EA F +M ++DL+ W+++
Sbjct: 208 IGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTL 267
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G P E++ + M+ EG + ++ ACA L G +HG IRR L
Sbjct: 268 IAGYE-RSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGL 326
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ ++ + +L+DMY+K G++ + VF MSR ++V+W A++ G+ +G +EL +
Sbjct: 327 DGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDK 386
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVP 328
M G PD V ++ L AC+ G + G R+ F L++G
Sbjct: 387 MVRSGIRPDRVVFMAILSACSHAGLVDEG--------LRY-FKLMVG------------- 424
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSA 387
D S D + ++ G G EEA ++IE+M KPD + L A
Sbjct: 425 -------DYNISPDQEIYGCVVDLLGRAGKVEEA----YELIESMPFKPDECVWGPFLGA 473
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA-------RAGEVEEALKIVDSM 440
G+ ++ ++I H A +L+ + GE K++ M
Sbjct: 474 CKAHTFPNLGK------LAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRM 527
Query: 441 ST--EPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
E G + WV + G H + F +G++V K+
Sbjct: 528 GNKKETGRS-WVEV--GNHVY-SFVVGDEVGSKI 557
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 166/354 (46%), Gaps = 11/354 (3%)
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
K L+ + MI G A + M E +D + + +++AC + +G V
Sbjct: 56 KGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLV 115
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTG-HLDLASHVFKNMSRINIVTWGALISGFAQ--N 256
HG +I+ L+ + V +L+DMYA +D A VF+ + N V+W LI+G+ +
Sbjct: 116 HGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDD 175
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
G G + M ++ P S S+ A+ AC IG G+ +H + F+ NL +
Sbjct: 176 GYGGLRVFRQMLLEEVELNPFSFSI--AVRACTSIGSHTFGEQLHAAVTKHGFESNLPVM 233
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
S++DMY +C S A F +M RDLI+WN +IA Y + E+L +F M
Sbjct: 234 NSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYE-RSNPTESLYVFSMMESEGFS 292
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
P+ TF S+++A + + G+ ++ + + ++D+ ++ G + ++ +
Sbjct: 293 PNCFTFTSIMAACATLAFLNCGQQIHGRIIRR-GLDGNLALSNALIDMYSKCGNIADSHQ 351
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ MS L W A++ G H ++ K+++ + PD + A++S
Sbjct: 352 VFGGMSRR-DLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILS 404
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 127/241 (52%), Gaps = 11/241 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + A + F E+ R + T+N++I Y R +P E L +++ M E P+
Sbjct: 236 ILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERS-NPTESLYVFSMMESEGFSPN 294
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT + AC +L L G++I + + G ++ + ++++++Y KCG + ++ F
Sbjct: 295 CFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFG 354
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DL 190
M R+DLV W++M+ G +G EAV+ + +M + GI D VV M ++ AC+ D
Sbjct: 355 GMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDE 414
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
G F L V Y+I + D ++ +VD+ + G ++ A + ++M + + WG
Sbjct: 415 GLRYFKLMVGDYNI----SPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPF 470
Query: 250 I 250
+
Sbjct: 471 L 471
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+R + L T + G LA+ + K+ ++ +I+G+
Sbjct: 19 VRNSIQLVQNCTTPPNPPFIPKGPSVLATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAW 78
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
+ EM + +P++ ++ S L AC + L G+ +HG ++ D + + +++DMY
Sbjct: 79 MVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMY 138
Query: 323 SKCGVP-SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
+ C V A +F + ++ +SW +IA Y G L +F QM+ V+ + +F
Sbjct: 139 ATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSF 198
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+ + A + G G V+K+ + ++D+ R EA + M+
Sbjct: 199 SIAVRACTSIGSHTFGEQ-LHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMN 257
Query: 442 TEPGLAVWVALLSG 455
+ L W L++G
Sbjct: 258 -QRDLITWNTLIAG 270
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 312/542 (57%), Gaps = 6/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A ++ ++ V T+NS+I Y + E L ++ MI + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + A L +L G E+ ++ G+ +++ VG++++++Y KC AF
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KDL+ W+++I G N EA++ ++ + K+ ++ DE+++ +++A + L
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H + +R+ L LD +Q LVD+Y K ++ A+ VF+++ ++V+W ++IS A
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG +EL M G DSV+L+ L A A + L G+ IH Y +R+ F +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+DMY+ CG A+A+FD+++ + L+ + +I +YG+HG G+ A+ LF +M V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SH+GL++EGR + +M +Y+++P +HY C+VD+L RA V EA
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAF 744
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M TEP VW ALL+ C +H + IGE A+++L+L P + G LVSN FA +
Sbjct: 745 EFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQG 804
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLY 550
+W +V VR M+ SGM+K PG S +E++G++H F DKSH + YE + V +KL
Sbjct: 805 RWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Query: 551 LE 552
E
Sbjct: 865 RE 866
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 197/379 (51%), Gaps = 3/379 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G+++ +YG + A K+F+E+P R +N++I AY P L LY M E V
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP 179
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
S+F LKAC L D++ G E+ V+LGY + F+ ++++++Y K ++ A
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 134 FEKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ Q K D V W+S+++ +G+ E ++ ++ M G + ++ + AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 193 SRFGLSVHGYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
++ G +H ++ + ++ V +L+ MY + G + A + + M+ ++VTW +LI
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+ QN + LE +M + G + D VS+ S + A ++ L G +H Y ++ +D
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
NL +G ++IDMYSKC + F +M +DLISW +IA Y + EAL LF +
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 371 ETMVKPDHSTFASLLSALS 389
+ ++ D S+L A S
Sbjct: 480 KKRMEIDEMILGSILRASS 498
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 251/490 (51%), Gaps = 6/490 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFE 59
++K + G V ++++Y +D+ +AR+LF+ +G +NSI+ +YS E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSML 118
L L+ +M P+S T AL AC K+G+EI ++ + ++++V ++++
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y +CGKM +A +M D+V W+S+I G V N +EA++ + M G +DEV
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M +I A L + G+ +H Y I+ + +++V +L+DMY+K F M
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++++W +I+G+AQN LEL ++ E D + L S L A + + + + K
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH + +R+ + V+ ++D+Y KC A +F+ ++ +D++SW +I+S ++G+
Sbjct: 508 EIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EA+ LF +M+ET + D +LSA + + +GR ++ K A
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLN 476
+VD+ A G+++ A + D + + GL + ++++ G H K ++ + ++
Sbjct: 628 -VVDMYACCGDLQSAKAVFDRIERK-GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 477 PDDLGIHALV 486
PD + AL+
Sbjct: 686 PDHISFLALL 695
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 3/279 (1%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ ++ +Y KCG +++A F++M + W++MI V NG+P A+ Y M+ E
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ L++ACA L D R G +H ++ + + +LV MYAK L A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 232 SHVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+F + + V W +++S ++ +G + TLEL EM G P+S ++VSAL AC
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 291 IGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ KLGK IH ++ + L + ++I MY++CG A + QM + D+++WN
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+I Y + +EAL F MI K D + S+++A
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 288 CAQIGFLKLGKSIHGYTVRRF-DFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
C + + G+ +H + F F L L ++ MY KCG A +FD+M R +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFA 149
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I +Y +G AL+L+ M V S+F +LL A + + G L+V
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
K T +V + A+ ++ A ++ D + +W ++LS
Sbjct: 210 -KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 291/546 (53%), Gaps = 4/546 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPF 58
+I T L + ++ LY + LF P + V ++ S+I +R + PF
Sbjct: 53 LITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPF 112
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L +N M + V P+ TF+ L AC GE++ + G+ +VFV S+++
Sbjct: 113 KALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALV 172
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DE 177
++Y KC M A FE+M ++LV W++MI G + N +A+ +K + E + A DE
Sbjct: 173 DMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDE 232
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V + ACA+ G+ FG VHG +++ + V + SL DMY K G + + +F N
Sbjct: 233 VSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 292
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
++VTW +I + N M+ G PD S S L +CA + L G
Sbjct: 293 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 352
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
IH +R F NL + +S+I MY+KCG A +F++ + R+++ W IIA+ H
Sbjct: 353 TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQH 412
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
GH + LF QM+ +KPD+ TF S+LSA SH+G VEEG ++F+ M+ + I P +H
Sbjct: 413 GHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEH 472
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YAC+VDLL+RAGE++ A + ++ M +P +VW ALLS C NH +G++VA K+ L
Sbjct: 473 YACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLE 532
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
PD+ G + L+ N E VR+ M G++K PG S +++ + F + DKSH
Sbjct: 533 PDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSH 592
Query: 537 NQYEDI 542
+ ++I
Sbjct: 593 EKTKEI 598
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 293/498 (58%), Gaps = 11/498 (2%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
Q++ ++ P T+ + + +C L G ++ R + G D F+ + ++N+Y +
Sbjct: 68 QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELD 127
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
++ A F+K +++ + W+++ L G RE +D Y+RM + G+ +D +++
Sbjct: 128 SIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLK 187
Query: 186 ACADLGDSRF------GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
AC + F G +HG+ +R V + T+L+DMYA+ G + AS VF M
Sbjct: 188 AC--VASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMP 245
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLG 297
N+V+W A+I+ +++NG LEL +M ++ P+SV++VS L ACA + L+ G
Sbjct: 246 VKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQG 305
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +HGY +RR D L + ++++ +Y++CG +F++M+ RD++SWN +I+SYGIH
Sbjct: 306 KLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIH 365
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G G +A+ +F +MI+ + P +F S+L A SH+GLVEEG+ F+ MV +KI P+ +H
Sbjct: 366 GFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEH 425
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YACMVDLL RA ++EA KI+D M EPG VW +LL C H + E+ ++ +L
Sbjct: 426 YACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELE 485
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + G + L+++ +A + W EV V+ + G++KVPG S +E+ ++++F+ D+ +
Sbjct: 486 PTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFN 545
Query: 537 NQYEDIVYVLKKLYLEMR 554
Q E + +L KL +EM+
Sbjct: 546 PQIEQLHALLLKLSMEMK 563
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 166/298 (55%), Gaps = 6/298 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y + I +ARK+F++ R + +N++ A + EVL LY +M + V
Sbjct: 118 KLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPS 177
Query: 75 DSSTFTVALKACVS----LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV+ + L G EI + G+ V + +++L++Y + G + A
Sbjct: 178 DRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNA 237
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID--ADEVVMMGLIQACA 188
F++M K++V WS+MI NG+P EA++ +++M E D + V M+ ++QACA
Sbjct: 238 SRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACA 297
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +RR L+ + V ++LV +YA+ G+L+L VF+ M + ++V+W +
Sbjct: 298 ALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNS 357
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
LIS + +G +++ EM G P +S VS L AC+ G ++ GK + VR
Sbjct: 358 LISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVR 415
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 300/556 (53%), Gaps = 3/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK S++ + +IA+Y N + A K+F +P + + +++SII +S+ FE
Sbjct: 191 VIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEA 250
Query: 61 LGLYNQMIKEDV-RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L +M+ V P+ F +LKAC SL+ G +I ++L + G S+ +
Sbjct: 251 LSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCD 310
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +CG ++ A F +++R D W+ +I GL NG EAV + M+ G D +
Sbjct: 311 MYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAIS 370
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM- 238
+ L+ A G+ +H + I+ D+ V SL+ MY L ++F++
Sbjct: 371 LRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFR 430
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++ + V+W A+++ Q+ L L M EPD +++ + L C +I LKLG
Sbjct: 431 NKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 490
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y+ + + +IDMY+KCG AR +FD M + D++SW+ +I Y G
Sbjct: 491 QVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSG 550
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
GEEAL LF +M + ++P+H TF +L+A SH GLVEEG + +M +++ I PT++H
Sbjct: 551 FGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHC 610
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+C+VDLLARAG + EA + +D M EP + VW LLS C + +K A+ +LK++P
Sbjct: 611 SCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDP 670
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ H L+ + A WE+ A +R +M+K +KK+PG S ++V ++H F ED H
Sbjct: 671 FNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHP 730
Query: 538 QYEDIVYVLKKLYLEM 553
+ +DI VL ++ +M
Sbjct: 731 ERDDIYTVLHNIWSQM 746
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 230/450 (51%), Gaps = 19/450 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+++YG + AR++F+ +P R + +Y S+I YS+ E + LY +M++ D+ PD
Sbjct: 105 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPD 164
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F +KAC D+ +G+++ + ++L + + ++++ +YV+ +M++A F
Sbjct: 165 QFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFY 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSR 194
+ KDL+ WSS+I G G EA+ K M G+ +E + ++AC+ L
Sbjct: 225 GIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 284
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +HG I+ L + SL DMYA+ G LD A VF + R + +W +I+G A
Sbjct: 285 YGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLA 344
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL--GKSIHGYTVR-RFDFN 311
NG A + + EM++ GF PD++SL S L CAQ + L G IH + ++ F +
Sbjct: 345 NNGYADEAVSVFSEMRNSGFIPDAISLRS--LLCAQTKPMALCQGMQIHSFIIKCGFLAD 402
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMI 370
L + S++ MY+ C C LF+ +++ D +SWN I+ + H E L LF M+
Sbjct: 403 LSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLML 462
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRY-----WFDLMVSKYKIQPTEKHYACMVDLLA 425
+ +PDH T +LL ++ G W +V + I+ ++D+ A
Sbjct: 463 VSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNG------LIDMYA 516
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G + +A +I DSM + W L+ G
Sbjct: 517 KCGSLRQARRIFDSMDN-GDVVSWSTLIVG 545
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 198/411 (48%), Gaps = 32/411 (7%)
Query: 71 DVRPDSSTFTVALK-------ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
D +S+F + L+ AC S L G +I + D + + +L++Y K
Sbjct: 52 DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGK 111
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG + +A F+ M ++LV ++S+I G NGQ EA+ Y +M + + D+ +
Sbjct: 112 CGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSI 171
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
I+ACA GD G +H I+ + + Q +L+ MY + + AS VF + ++
Sbjct: 172 IKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDL 231
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W ++I+GF+Q G L L EM S G F P+ S+L AC+ + G IHG
Sbjct: 232 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 291
Query: 303 YTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
++ N + G S+ DMY++CG AR +F+Q++ D SWNVIIA +G+ +E
Sbjct: 292 LCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADE 351
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKI 410
A+S+F +M + PD + SLL A + HS +++ G + DL V +
Sbjct: 352 AVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCG-FLADLSVCNSLL 410
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
Y DL E+ DS+S W A+L+ C H++
Sbjct: 411 ----TMYTFCSDLYCCFNLFEDFRNKADSVS-------WNAILTACLQHEQ 450
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 311/568 (54%), Gaps = 32/568 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + ++ LFE R + ++N++I ++S+ + E L + M+ E V D
Sbjct: 237 LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELD 296
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV----FVGSSMLNLYVKCGKMNEAM 131
T L AC L L +G+EI + ND+ FVGS+++++Y C ++
Sbjct: 297 GVTIASVLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGR 353
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADL 190
F+ + + + W++MI+G NG +A+ + M K G+ + M ++ AC
Sbjct: 354 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHC 413
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
S+HGY+++ D VQ +L+DMY++ G +D++ +F +M + V+W +I
Sbjct: 414 EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMI 473
Query: 251 SGFAQNGLAGSTLELLMEMQSC-----------------GFEPDSVSLVSALLACAQIGF 293
+G+ +G + L LL EMQ ++P++++L++ L CA +
Sbjct: 474 TGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAA 533
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ GK IH Y +R ++ +G++++DMY+KCG + +R +F++M ++++I+WNV+I +
Sbjct: 534 IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMA 593
Query: 353 YGIHGHGEEALSLFLQMIETM-----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
G+HG GEEAL LF M+ KP+ TF ++ +A SHSGL+ EG F M
Sbjct: 594 CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHD 653
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE-PGLAVWVALLSGCHNHKKFSIGE 466
+ ++PT HYAC+VDLL RAG++EEA ++V++M E + W +LL C H+ +GE
Sbjct: 654 HGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGE 713
Query: 467 KVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGEL 526
AK +L L P+ + L+SN ++ W + VRK MR+ G+KK PG S +E E+
Sbjct: 714 VAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEV 773
Query: 527 HAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
H F+ D SH Q E + L+ L +MR
Sbjct: 774 HKFMAGDVSHPQSEQLHGFLETLSEKMR 801
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 220/428 (51%), Gaps = 14/428 (3%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE 96
P R ++ + + +R E + Y +M RPD+ F LKA L DLK GE
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 97 EIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+I AV+ GYG + V V ++++N+Y KCG + + F+++ +D V W+S I L
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG---DSRFGLSVHGYSIRRHLNLDV 212
+ +A++A++ M+ E ++ ++ + AC++LG R G +HGYS+R +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
+L+ MYAK G +D + +F++ ++V+W +IS F+Q+ L M
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSC 330
G E D V++ S L AC+ + L +GK IH Y +R D N +G++++DMY C
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALS 389
R +FD + R + WN +I+ Y +G E+AL LF++MI+ + P+ +T AS++ A
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVEEALKIVDSMSTEPGLA 447
H V K+ E Y ++D+ +R G+++ + I DSM ++
Sbjct: 412 HCEAFSNKESIHGYAV---KLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVS 468
Query: 448 VWVALLSG 455
W +++G
Sbjct: 469 -WNTMITG 475
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 230/485 (47%), Gaps = 40/485 (8%)
Query: 9 YGNS----VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY 64
YG+S ++ +YG I K+F+ + R ++NS I A R E + L +
Sbjct: 123 YGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAF 182
Query: 65 NQMIKEDVRPDSSTFTVALKACVSL---MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
M E++ S T AC +L L++G+++ ++ +G F ++++ +Y
Sbjct: 183 RAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMY 241
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G+++++ FE +D+V W++MI+ + + EA+ ++ M EG++ D V +
Sbjct: 242 AKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIA 301
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ AC+ L G +H Y +R + L + V ++LVDMY ++ VF ++
Sbjct: 302 SVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILG 361
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
I W A+ISG+A+NGL L L +EM + G P++ ++ S + AC +S
Sbjct: 362 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKES 421
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHGY V+ F + + +++DMYS+ G + +FD M+ RD +SWN +I Y + G
Sbjct: 422 IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGR 481
Query: 359 GEEALSLF--LQMIETMV---------------KPDHSTFASLLSALSHSGLVEEGRYWF 401
AL L +Q +E KP+ T ++L + + +G+
Sbjct: 482 YSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIH 541
Query: 402 -----DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+++ S + + +VD+ A+ G + + ++ + M + + W L+ C
Sbjct: 542 AYAIRNMLASDITVG------SALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMAC 594
Query: 457 HNHKK 461
H K
Sbjct: 595 GMHGK 599
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 313/543 (57%), Gaps = 6/543 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A ++ ++ V T+NS+I Y + E L ++ MI + D
Sbjct: 289 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 348
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + A L +L G E+ ++ G+ +++ VG++++++Y KC AF
Sbjct: 349 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 408
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KDL+ W+++I G N EA++ ++ + K+ ++ DE+++ +++A + L
Sbjct: 409 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 468
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H + +R+ L LD +Q LVD+Y K ++ A+ VF+++ ++V+W ++IS A
Sbjct: 469 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 527
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG +EL M G DSV+L+ L A A + L G+ IH Y +R+ F +
Sbjct: 528 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 587
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+DMY+ CG A+A+FD+++ + L+ + +I +YG+HG G+ A+ LF +M V
Sbjct: 588 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 647
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SH+GL++EGR + +M +Y+++P +HY C+VD+L RA V EA
Sbjct: 648 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAF 707
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M TEP VW ALL+ C +H + IGE A+++L+L P + G LVSN FA +
Sbjct: 708 EFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQG 767
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLY 550
+W +V VR M+ SGM+K PG S +E++G++H F DKSH + YE + V +KL
Sbjct: 768 RWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 827
Query: 551 LEM 553
E+
Sbjct: 828 REV 830
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 192/371 (51%), Gaps = 3/371 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
GK VS K+F+E+P R +N++I AY P L LY M E V S+F
Sbjct: 91 GKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 150
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK- 140
LKAC L D++ G E+ V+LGY + F+ ++++++Y K ++ A F+ Q K
Sbjct: 151 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 210
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D V W+S+++ +G+ E ++ ++ M G + ++ + AC ++ G +H
Sbjct: 211 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 270
Query: 201 GYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
++ + ++ V +L+ MY + G + A + + M+ ++VTW +LI G+ QN +
Sbjct: 271 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 330
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
LE +M + G + D VS+ S + A ++ L G +H Y ++ +D NL +G ++
Sbjct: 331 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 390
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
IDMYSKC + F +M +DLISW +IA Y + EAL LF + + ++ D
Sbjct: 391 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 450
Query: 379 STFASLLSALS 389
S+L A S
Sbjct: 451 MILGSILRASS 461
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 251/490 (51%), Gaps = 6/490 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFE 59
++K + G V ++++Y +D+ +AR+LF+ +G +NSI+ +YS E
Sbjct: 171 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 230
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSML 118
L L+ +M P+S T AL AC K+G+EI ++ + ++++V ++++
Sbjct: 231 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 290
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y +CGKM +A +M D+V W+S+I G V N +EA++ + M G +DEV
Sbjct: 291 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 350
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M +I A L + G+ +H Y I+ + +++V +L+DMY+K F M
Sbjct: 351 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 410
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++++W +I+G+AQN LEL ++ E D + L S L A + + + + K
Sbjct: 411 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 470
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH + +R+ + V+ ++D+Y KC A +F+ ++ +D++SW +I+S ++G+
Sbjct: 471 EIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 530
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EA+ LF +M+ET + D +LSA + + +GR ++ K A
Sbjct: 531 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 590
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLN 476
+VD+ A G+++ A + D + + GL + ++++ G H K ++ + ++
Sbjct: 591 -VVDMYACCGDLQSAKAVFDRIERK-GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 648
Query: 477 PDDLGIHALV 486
PD + AL+
Sbjct: 649 PDHISFLALL 658
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+FD+M R +WN +I +Y +G AL+L+ M V S+F +LL A +
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 160
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ G L+V K T +V + A+ ++ A ++ D + +W ++L
Sbjct: 161 IRSGSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219
Query: 454 S 454
S
Sbjct: 220 S 220
>gi|297740128|emb|CBI30310.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/440 (39%), Positives = 258/440 (58%), Gaps = 4/440 (0%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++N+ + +R+ E L LY QM+ P++ TF A K+C SL G ++
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPRE 160
++ G + FV +S++++Y KC + A F++ R VC++++I G N + +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
AV +++M+KEG+ + V M+GLI CA FG S+H S+R L+ D+ V L+
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY + G +D A +F M ++TW A+ISG+AQNGLAG L+L +M+ G PD V+
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 281 LVSALLACAQIGFLKLGKSI-HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
LV L +CA +G G+ + + F FN L ++I+MY++CG ARA+FD M
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+++ISW IIA YG+HG GE A+ LF +MI + PD + F S+LSA SH+GL E+G Y
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+F M Y +QP +HY+C+VDLL RAG +EEA K++ SMS EP AVW ALL C H
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442
Query: 460 KKFSIGE-KVAKKVLKLNPD 478
+ + E K+ LK P+
Sbjct: 443 RNVELAELAFEKRKLKKEPE 462
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 9/354 (2%)
Query: 16 IIALYGGKNDIVSARKLFEE--LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++Y + I SARK+F+E YN++I YS + + L+ QM KE V
Sbjct: 97 LISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVS 156
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ T + C + L G + +V G D+ VG+ +L +YV+CG ++ A
Sbjct: 157 VNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKL 216
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M K L+ W++MI+G NG +D Y++M+ GI D V ++G++ +CA LG
Sbjct: 217 FDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAH 276
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G V + ++ +L++MYA+ G+L A +F M+ N+++W A+I+G+
Sbjct: 277 AAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGY 336
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G ++L EM S PD + VS L AC+ G + K ++ +T D+ L
Sbjct: 337 GMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTE--KGLYYFTAMERDYGLQ 394
Query: 314 LG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEA 362
G + V+D+ + G AR L M D W ++ + IH + E A
Sbjct: 395 PGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELA 448
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 5/243 (2%)
Query: 12 SVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG ++ +Y + ARKLF+ +P +G+ T+N++I Y++ VL LY +M
Sbjct: 195 SVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFT 254
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ PD T L +C L G E+ ++ G+G + F+ ++++N+Y +CG + +A
Sbjct: 255 GIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKA 314
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ M K+++ W+++I G +GQ AV + M D + ++ AC+
Sbjct: 315 RAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA 374
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
G + GL + ++ R L + + +VD+ + G L+ A + +MS + WG
Sbjct: 375 GLTEKGL-YYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 248 ALI 250
AL+
Sbjct: 434 ALL 436
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 310/536 (57%), Gaps = 15/536 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R+++ Y ++ ++R +FE + + V +NS+I Y + + L L+ +M + + P
Sbjct: 68 RLVSAYATCGELATSRFVFESVEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLP 127
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T K L DL G+ I K + +G+ +DV VG+S++++Y +CG+ +A+ F
Sbjct: 128 DDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVF 187
Query: 135 EKMQRKDLVCWSSMINGLV------FNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ-AC 187
++ +++ ++ +I+G F + + + RM+ EG AD + L+ C
Sbjct: 188 DETPHRNVGSFNVVISGCAALENCNFTSHD-DLSNFFLRMQCEGFKADAFTVASLLPVCC 246
Query: 188 ADLGDSRFGLSVHGYSIRRHLNL----DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
D G +G +H Y ++ L+L DV + +SL+DMY+++ + L VF M N+
Sbjct: 247 GDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNV 306
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W A+I+G+ QNG L LL MQ G P+ VSL+SAL AC + L GK IHG
Sbjct: 307 YVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHG 366
Query: 303 YTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGE 360
++++ + ++ L ++IDMYSKCG AR F+ +D I+W+ +I++YG+HG GE
Sbjct: 367 FSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGE 426
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EA+ + +M++ KPD T +LSA S SGLV+EG + +++KY+I+PT + AC+
Sbjct: 427 EAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACV 486
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VD+L R+G++++AL+ + M +PG +VW +LL+ H + + +L+L P++
Sbjct: 487 VDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENP 546
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ +SN +A +++W+ V VR M++ G+KKVPG S + ++G+ H+F + DK+H
Sbjct: 547 SNYISLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITISGKTHSFSVADKAH 602
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 192/393 (48%), Gaps = 17/393 (4%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C+ L K+ ++ + + G+ + F+ + +++ Y CG++ + FE ++ K +
Sbjct: 35 LQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKSV 94
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+S+ING V N R+A+ ++ M + G+ D+ + + + +L D G +HG
Sbjct: 95 YLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGK 154
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ----NGL 258
IR DV V SL+ MY + G A VF N+ ++ +ISG A N
Sbjct: 155 GIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALENCNFT 214
Query: 259 AGSTL-ELLMEMQSCGFEPDSVSLVSAL-LACAQIGFLKLGKSIHGYTVR-----RFDFN 311
+ L + MQ GF+ D+ ++ S L + C G G+ +H Y V+ + D +
Sbjct: 215 SHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSD 274
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-I 370
+ LG+S+IDMYS+ R +FDQM++R++ W +I Y +G ++AL L M +
Sbjct: 275 VHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQM 334
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAG 428
+ ++P+ SL+SAL GL+ + K++ + C ++D+ ++ G
Sbjct: 335 KDGIRPNK---VSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCG 391
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ A + ++ S W +++S H +
Sbjct: 392 SLDYARRAFETSSYFKDAITWSSMISAYGLHGR 424
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 13/287 (4%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ L+Q C DL + H + + + T LV YA G L + VF+++
Sbjct: 31 LLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVE 90
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++ W +LI+G+ +N L L EM G PD +L + ++ L GK
Sbjct: 91 AKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKL 150
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA------S 352
IHG +R F ++V+G S++ MY +CG A +FD+ R++ S+NV+I+ +
Sbjct: 151 IHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALEN 210
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS-ALSHSGLVEEGRYWFDLMVSK---Y 408
H ++ + FL+M K D T ASLL +G + GR +V
Sbjct: 211 CNFTSH-DDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDL 269
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K+ + ++D+ +R+ +V ++ D M + VW A+++G
Sbjct: 270 KMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNR-NVYVWTAMING 315
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 292/530 (55%), Gaps = 10/530 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+++P + +NS+ Y++ ES EV+ L+ QM D+RP+ TF V LK+C
Sbjct: 89 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 148
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L GE++ ++ G+ + FVG++++++Y G + +A F +M +++V W+SM
Sbjct: 149 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 208
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
ING + + A + + + +++ G I+ D+ ++R
Sbjct: 209 INGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEG-GDMVEAR-------KLFHEMP 260
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
N DV +++ YA G+++ +F+ M NI +W ALI G+A NGL L
Sbjct: 261 NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKR 320
Query: 269 MQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M S P+ +LV+ L ACA++G L LGK +H Y N+ +G +++DMY+KCG
Sbjct: 321 MLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCG 380
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ A ++F M ++DLISWN +I +H G +AL+LF QM KPD TF +L
Sbjct: 381 IIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILC 440
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A +H GLVE+G +F M Y I P +HY CMVD+LARAG +E+A+ V M E
Sbjct: 441 ACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADG 500
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W LL C +K + E +++++L P + + ++SN + +WE+VA ++ M
Sbjct: 501 VIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAM 560
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
R +G KK+PG S++EVN + F D+ H Q E+I VL+ L +R+
Sbjct: 561 RDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSF 610
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 133/258 (51%), Gaps = 6/258 (2%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y ++ + LFEE+P R + ++N++I Y+ FEVLG + +M+ E DV P+ +T
Sbjct: 274 YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDAT 333
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L AC L L +G+ + A G +V+VG++++++Y KCG + A+ F M
Sbjct: 334 LVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMD 393
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
KDL+ W+++I GL + + +A++ + +MK G D + +G++ AC +G G +
Sbjct: 394 TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFA 453
Query: 199 VHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG---F 253
+L + ++ +VDM A+ G L+ A + M + V W L+ +
Sbjct: 454 YFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIY 513
Query: 254 AQNGLAGSTLELLMEMQS 271
LA L+ L+E++
Sbjct: 514 KNVELAELALQRLIELEP 531
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 173/387 (44%), Gaps = 19/387 (4%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F L++C + K +I + + G+ + ++ ++ + +M A F+++
Sbjct: 41 FISLLQSCKTS---KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 97
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++ W+SM G + RE V + +MK I + ++++C + G
Sbjct: 98 DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQ 157
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH + I+ + V T+L+DMY+ G + A +F M N+V W ++I+G+ +
Sbjct: 158 VHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA- 216
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQI---GFLKLGKSIHGYTVRRFDFNLVLG 315
+L+ + P+ ++ ++ I ++ K H R +++
Sbjct: 217 -----DLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR----DVMFW 267
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
+V+ Y+ G LF++M R++ SWN +I Y +G E L F +M+ E+ V
Sbjct: 268 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 327
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ +T ++LSA + G ++ G+ W + ++ ++D+ A+ G +E A+
Sbjct: 328 PPNDATLVTVLSACARLGALDLGK-WVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAI 386
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ M T+ L W L+ G H +
Sbjct: 387 SVFRGMDTK-DLISWNTLIGGLAMHSR 412
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 278/511 (54%), Gaps = 25/511 (4%)
Query: 61 LGLYNQMIKEDVRPDSS---TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ L+ QM + V P SS + ALK+C L + + A+ G D F +++
Sbjct: 32 ISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANAL 90
Query: 118 LNLYVKC---------------GKMNEAMV-----AFEKMQRKDLVCWSSMINGLVFNGQ 157
LNL +K G + A F++M +D V W+++I G + +
Sbjct: 91 LNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKR 150
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
+EA+ + M ++G D + ++ A+ D + G+ VHGY+I+ + DV V +S
Sbjct: 151 HQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSS 210
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMYA +D + VF + S + V W ++++G+AQNG L + M G P
Sbjct: 211 LIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPV 270
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V+ S + A + L+LGK +H Y +R RF+ N+ + +S+IDMY KCG AR +F+
Sbjct: 271 PVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFN 330
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+QS D++SW +I Y +HG EA LF +M VKP+H TF ++L+A SH+GLV+
Sbjct: 331 GIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDN 390
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G +F+ M ++Y P+ +H A + D L RAG+++EA + M +P +VW LL C
Sbjct: 391 GWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRAC 450
Query: 457 HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPG 516
HK + E+VAKK+ +L P +G H ++SN ++ +W E A +RK+MR GMKK P
Sbjct: 451 RVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPA 510
Query: 517 YSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
S +EV +LH FI DKSH Y+ I+ L
Sbjct: 511 CSWIEVKNKLHVFIAHDKSHPWYDRIIDALN 541
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 146/270 (54%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S RK+F+E+ R ++N++I+ + + E L + +M ++ PD+ T + L
Sbjct: 122 SMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFA 181
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
D+K G + A++ G+ NDVFVGSS++++Y C +M+ +M F+ D V W+S
Sbjct: 182 ECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNS 241
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M+ G NG EA+ ++RM + G+ V LI A +L R G +H Y IR
Sbjct: 242 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 301
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
N ++ + +SL+DMY K G++D+A VF + +IV+W A+I G+A +G L
Sbjct: 302 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 361
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M+ +P+ ++ ++ L AC+ G + G
Sbjct: 362 RMELGNVKPNHITFLAVLTACSHAGLVDNG 391
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 96/176 (54%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + K+F+ +NS++ Y++ S E LG++ +M++ VRP
Sbjct: 211 LIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPV 270
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ + A +L L++G+++ + + +++F+ SS++++Y KCG ++ A F
Sbjct: 271 PVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFN 330
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+Q D+V W++MI G +G EA ++RM+ + + + + ++ AC+ G
Sbjct: 331 GIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAG 386
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 317/588 (53%), Gaps = 42/588 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A KLF ++P V +N++I +S+ + E + LY M+KE V PDS TF L
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 89 LMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L G+++ V+ G G++++V ++++ +Y CG M+ A F++ ++D+ W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI+G + E+++ M++ + V ++ ++ AC+ + D VH Y
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG---------- 257
++++ +LV+ YA G +D+A +F++M ++++W +++ G+ + G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 258 ---------------------LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+LE+ EMQS G PD ++VS L ACA +G L++
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ I Y + + ++V+G ++IDMY KCG A+ +F M RD +W ++
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G G+EA+ +F QM + ++PD T+ +LSA +HSG+V++ R +F M S ++I+P+
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLV 506
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVD+L RAG V+EA +I+ M P VW ALL H + E AKK+L+L
Sbjct: 507 HYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
PD+ ++AL+ N +A ++W+++ VR+ + +KK PG+S++EVNG H F+ DKS
Sbjct: 567 EPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKS 626
Query: 536 HNQYEDIVYVLKKLYLEMRAISSWLQGHME--------EHEEHDPLST 575
H Q E+I L++L E +++L E E EEH ++T
Sbjct: 627 HLQSEEIYMKLEELAQE-STFAAYLPDTSELLFEAGNKELEEHSQVTT 673
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 207/475 (43%), Gaps = 47/475 (9%)
Query: 55 ESPFEV-LGLYNQM----IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN 109
+SPF L ++ + I E + D S F L C + K ++ +++ G
Sbjct: 8 KSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAP 64
Query: 110 DVFVGSSMLNLYVK--CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
+ + + G ++ A F K+ D+V W++MI G E V Y
Sbjct: 65 NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 168 MKKEGIDADEVVMMGLIQACA-DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M KEG+ D L+ D G G +H + ++ L ++ VQ +LV MY+ G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+D+A VF + ++ +W +ISG+ + ++ELL+EM+ P SV+L+ L
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 287 ACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC--------------- 330
AC+++ L K +H Y + + +L L ++++ Y+ CG
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 331 ----------------ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
AR FDQM RD ISW ++I Y G E+L +F +M +
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T S+L+A +H G +E G W + K KI+ ++D+ + G E+A
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV--LKLNPDDLGIHALVS 487
K+ M W A++ G N+ + KV ++ + + PDD+ ++S
Sbjct: 424 KVFHDMDQRDKFT-WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ Y + ++ AR F+++P+R ++ +I Y R E L ++ +M + PD
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L L++GE I + NDV VG++++++Y KCG +A F
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D W++M+ GL NGQ +EA+ + +M+ I D++ +G++ AC +
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC-----NHS 482
Query: 196 GLSVHGYSIRRHLNLDVKVQTSL------VDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
G+ + D +++ SL VDM + G + A + + M N + WGA
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGA 542
Query: 249 LI 250
L+
Sbjct: 543 LL 544
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 291/523 (55%), Gaps = 10/523 (1%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE 104
N +I Y+ + P+ + +Y ++ PD TF LK+C + + +V+
Sbjct: 78 NLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVK 137
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
G D++V ++++++Y CG A FE M +D+V W+ +I+G V G EA+
Sbjct: 138 TGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISL 197
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ RM E V ++G AC LG G +HG + ++ V +++DMY K
Sbjct: 198 FLRMNVEPNVGTFVSILG---ACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMK 254
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
+ A +F M +I++W ++I G Q +L+L +MQ+ GFEPD V L S
Sbjct: 255 CDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSV 314
Query: 285 LLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L ACA +G L G+ +H Y R +++ +GT+++DMY+KCG A+ +F+ M S+++
Sbjct: 315 LSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNI 374
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+WN I I+G+G+EAL F ++E+ +P+ TF ++ +A H+GLV+EGR +F+
Sbjct: 375 RTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNE 434
Query: 404 MVSK-YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M S Y + P +HY CMVDLL RAG V EA++++ +M P + + ALLS + +
Sbjct: 435 MTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNV 494
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+++ K + + D GI+ L+SN +A +KW EV VR+ M++ G+ K PG S++ V
Sbjct: 495 GFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRV 554
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHME 565
+G H F++ D SH Q E+I YVL L + A +L+GH+
Sbjct: 555 DGMSHEFLVGDNSHPQSEEI-YVL----LNILANQIYLEGHIN 592
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 154/287 (53%), Gaps = 11/287 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI----KED 71
++ +Y D V A K+FE++ +R V ++ +I Y + GL+N+ I + +
Sbjct: 150 LVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKT-------GLFNEAISLFLRMN 202
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P+ TF L AC L L +G+ I + YG ++ V +++L++Y+KC + +A
Sbjct: 203 VEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVTDAR 262
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++M KD++ W+SMI GLV PRE++D + +M+ G + D V++ ++ ACA LG
Sbjct: 263 KMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACASLG 322
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G VH Y + DV + T+LVDMYAK G +D+A +F M NI TW A I
Sbjct: 323 LLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIG 382
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
G A NG L+ ++ G P+ V+ ++ AC G + G+
Sbjct: 383 GLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGR 429
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 279/513 (54%), Gaps = 25/513 (4%)
Query: 58 FEVLGLYNQMIKEDVRPDSS---TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
+ L+ QM + V P SS + ALK+C L + + A+ G D F
Sbjct: 346 LHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTA 404
Query: 115 SSMLNLYVK-------------CGKMNEAMVAFEKMQR-------KDLVCWSSMINGLVF 154
+++LNL +K G+ A+E M++ +D V W+++I G
Sbjct: 405 NALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAE 464
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+ + +EA+ + M ++G D + ++ A+ D + G+ VHGY+I+ + DV V
Sbjct: 465 HKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFV 524
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
+SL+DMYA +D + VF + S + V W ++++G+AQNG L + M G
Sbjct: 525 GSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGV 584
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARA 333
P V+ S + A + L+LGK +H Y +R RF+ N+ + +S+IDMY KCG AR
Sbjct: 585 RPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARR 644
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+F+ +QS D++SW +I Y +HG EA LF +M VKP+H TF ++L+A SH+GL
Sbjct: 645 VFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGL 704
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
V+ G +F+ M ++Y P+ +H A + D L RAG+++EA + M +P +VW LL
Sbjct: 705 VDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 764
Query: 454 SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
C HK + E+VAKK+ +L P +G H ++SN ++ +W E A +RK+MR GMKK
Sbjct: 765 RACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKK 824
Query: 514 VPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
P S +EV +LH FI DKSH Y+ I+ L
Sbjct: 825 EPACSWIEVKNKLHVFIAHDKSHPWYDRIIDAL 857
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 169/332 (50%), Gaps = 3/332 (0%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S RK+F+E+ R ++N++I+ + + E L + +M ++ PD+ T + L
Sbjct: 439 SMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFA 498
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
D+K G + A++ G+ NDVFVGSS++++Y C +M+ +M F+ D V W+S
Sbjct: 499 ECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNS 558
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M+ G NG EA+ ++RM + G+ V LI A +L R G +H Y IR
Sbjct: 559 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 618
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
N ++ + +SL+DMY K G++D+A VF + +IV+W A+I G+A +G L
Sbjct: 619 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 678
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKC 325
M+ +P+ ++ ++ L AC+ G + G ++ F +L ++ D +
Sbjct: 679 RMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRA 738
Query: 326 GVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
G A +M+ + S W+ ++ + +H
Sbjct: 739 GDLDEAYNFISEMKIKPTSSVWSTLLRACRVH 770
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 96/176 (54%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + K+F+ +NS++ Y++ S E LG++ +M++ VRP
Sbjct: 528 LIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPV 587
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ + A +L L++G+++ + + +++F+ SS++++Y KCG ++ A F
Sbjct: 588 PVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFN 647
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+Q D+V W++MI G +G EA ++RM+ + + + + ++ AC+ G
Sbjct: 648 GIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAG 703
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 322/559 (57%), Gaps = 7/559 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I++ L A + + +Y D+ AR LF+E+P + V +++++I Y +
Sbjct: 191 LIQSGLWASWSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIG 249
Query: 61 LGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L ++ +M+ + PD LKAC + +++ MG + + G +D+FV +S+++
Sbjct: 250 LQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLID 309
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KC A F +M R++ V W+S+++GL+ N + EA+ M+ EGI+ADEV
Sbjct: 310 MYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVT 369
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ +Q C +VH +IRR + V SL+D YAK ++LA VF
Sbjct: 370 LVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTR 429
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGK 298
R ++V W +I+GFA G + + +M G E P++V++++ L AC+ LK
Sbjct: 430 RRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNE-GIEVPNAVTIINLLQACSVSAELKRSM 488
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
HG +RR + +GT+++DMYSKCG +R F+Q+ +++I+W+ +IA+YG++G
Sbjct: 489 WAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNG 548
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EAL+L QM +KP+ T+ S+L+A SH GLVE G F M+ + + P +HY
Sbjct: 549 LAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHY 608
Query: 418 ACMVDLLARAGEVEEALKIVDSM--STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+CMVD+L+RAG++++A++++ M + G +VW ALLS C ++ ++GEK +VL+L
Sbjct: 609 SCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLEL 668
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
P +L + L S+ +A + W+ A ++ R+ G++ V GYS+V V+ + H F+ DKS
Sbjct: 669 EPLNLAGYLLASSMYASDGLWDNAARMKLLARERGVRAVAGYSIVHVDSKAHKFVAGDKS 728
Query: 536 HNQYEDIVYVLKKLYLEMR 554
+Q +I ++L +L+ M+
Sbjct: 729 CSQAGNIHHMLNQLHFCMK 747
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 172/339 (50%), Gaps = 7/339 (2%)
Query: 52 SRKESPFEVLGLYNQMIKEDVRP---DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG 108
S E EV+ Y ++ + D + F LKAC S + G+ + ++ +
Sbjct: 38 SSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKAC-SYLSYIDGKCLHACLIKTAFD 96
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+ +G+S+LN Y+KCG+++ A+ F+ M+ +D V W+ +I+G + G E + +
Sbjct: 97 SFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINA 156
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G + + ++ L+QAC L + GL +HGY I+ L VQ S + MYA +
Sbjct: 157 RVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADV-DM 215
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLA 287
D A +F M ++++W A+I G+ Q L++ +M S PD V LVS L A
Sbjct: 216 DCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKA 275
Query: 288 CAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
CA + +G+ +HG T+ R D +L + S+IDMYSKC A +F +M R+ +SW
Sbjct: 276 CANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSW 335
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
N +++ ++ EAL L M ++ D T + L
Sbjct: 336 NSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCL 374
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 27/263 (10%)
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP---DSVSLVSALLA 287
AS + +S +++W I + N + E+ + G D L A
Sbjct: 15 ASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKA 74
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C+ + ++ GK +H ++ FD +G S+++ Y KCG A ++FD M+SRD +SW
Sbjct: 75 CSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSW 133
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
NV+I +G E L F+ +P+ ST L+ A +EG L +
Sbjct: 134 NVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEG-----LQLH 188
Query: 407 KYKIQ-------PTEKHYACM-VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
Y IQ + + CM D+ +++ A + D M E + W A++ G
Sbjct: 189 GYLIQSGLWASWSVQNSFLCMYADV-----DMDCARILFDEM-PEKDVISWSAMIGGYVQ 242
Query: 459 HKKFSIGEKVAKKVL---KLNPD 478
+ + IG ++ +K+L ++ PD
Sbjct: 243 YLEDQIGLQIFQKMLSTSRITPD 265
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 300/544 (55%), Gaps = 2/544 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++A Y + A ++F+ +P+R + T+N+++ Y
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLA 192
Query: 61 LGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L + +M +V+ DS AL AC + G+EI + G D+ VG+S+L+
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLD 252
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG++ A F M + +V W+ MI G N +P EA D + +M+ EG+ + V
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ L+ ACA S +G SVHGY +RR V ++T+L++MY K G ++ + +F ++
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+V+W +I+ + + + L +E+ + PD ++ + + A +G L+ +
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH Y + + N ++ +V+ MY++ G +R +FD+M S+D+ISWN +I Y IHG
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+ AL +F +M ++P+ STF S+L+A S SGLV+EG F+LM+ +Y + P +HY
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYG 552
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CM DLL R G++ E L+ ++SM +P VW +LL+ N I E A+++ +L D
Sbjct: 553 CMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHD 612
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + ++S+ +A +WE+V VR M++ G+++ S+VE++ +F D SH+Q
Sbjct: 613 NTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQ 672
Query: 539 YEDI 542
I
Sbjct: 673 SRTI 676
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 229/461 (49%), Gaps = 47/461 (10%)
Query: 38 LRGVDTY--NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
+RG D + N +I ++ P L Y M+++ RPD TF V +K C L L G
Sbjct: 67 VRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEG 126
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++LG +DV+ +S++ Y K G + +A F+ M +D+V W++M++G V N
Sbjct: 127 RAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSN 186
Query: 156 GQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
G A+ ++ M + D V ++ + AC S G +HGY IR L D+KV
Sbjct: 187 GLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKV 246
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
TSL+DMY K G + A VF M +VTW +I G+A N + M+M++ G
Sbjct: 247 GTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGL 306
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
+ + V+ ++ L ACAQ G+S+HGY VRR F ++VL T++++MY K G +
Sbjct: 307 QVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEK 366
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS------LLSA 387
+F ++ ++ L+SWN +IA+Y EA++LFL+++ + PD+ T ++ LL +
Sbjct: 367 IFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGS 426
Query: 388 LSH-----------------------------SGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
L H SG V R FD MVSK I +
Sbjct: 427 LRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS-----WN 481
Query: 419 CMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGC 456
M+ A G+ + AL++ D M +P + +V++L+ C
Sbjct: 482 TMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 169/333 (50%), Gaps = 4/333 (1%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G+M+EA+ A ++ D + MI G G P A+ AY+ M ++G D ++
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+ CA LG G + HG I+ L DV SLV YAK G ++ A VF M +IV
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
TW ++ G+ NGL L EM + + DSV +++AL AC GK IHGY
Sbjct: 175 TWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGY 234
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+R + ++ +GTS++DMY KCG + AR++F M R +++WN +I Y ++ +EA
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEA 294
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
F+QM ++ + T +LL+A + + GR +V + + P +++
Sbjct: 295 FDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR-QFLPHVVLETALLE 353
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + G+VE + KI ++ + L W +++
Sbjct: 354 MYGKVGKVESSEKIFGKIANKT-LVSWNNMIAA 385
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
SLV A G +D A + + +I GFA GL L M G P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
D + + CA++G L G++ HG ++ + ++ S++ Y+K G+ A +F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLV 394
D M RD+++WN ++ Y +G G AL+ F +M + + V+ D + L+A
Sbjct: 166 DGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSS 225
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+G+ ++ ++ ++ K ++D+ + GEV A + +M + W ++
Sbjct: 226 MQGKEIHGYVI-RHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT-VVTWNCMIG 283
Query: 455 G 455
G
Sbjct: 284 G 284
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 304/546 (55%), Gaps = 12/546 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +V+ARK+F+ LP R V + +++ Y + P + ++ M++ P
Sbjct: 21 LVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPS 80
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T ++AL AC SL + +G++ ++ +D +G+++ +LY K G ++ ++ AF
Sbjct: 81 NFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR 140
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD++ W+++I+ NG+ + + M E ++ ++ + ++ C+ + S
Sbjct: 141 ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ VH S + ++++ SLV +Y K G +D A ++F M N++TW A+I+G AQ
Sbjct: 201 GMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ 260
Query: 256 -------NGLAGST----LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
N A T L + +++ G +PD +L S L C+++ L+ G+ IH T
Sbjct: 261 AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT 320
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ F ++V+GT+++DMY KCG AR F M +R LISW +I S+ HG + AL
Sbjct: 321 IKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHAL 380
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF M +P+ TF +L+A SH+G+V+E +F++M +YKI+P HY C+VD+
Sbjct: 381 QLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDM 440
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
R G ++EA ++ M EP +W+ L++GC NH +G A+++LKL P +
Sbjct: 441 FVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETY 500
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
++ N + ++WE+V+ VR+ M++ + K+ +S + + GE+H+F ++ HN ++
Sbjct: 501 VVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKTNNRLHNHNAELH 560
Query: 544 YVLKKL 549
+L L
Sbjct: 561 TLLNDL 566
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 181/369 (49%), Gaps = 14/369 (3%)
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
++ G + FV S ++N+Y KCG M A F+ + R+++V W++++ G V N QP AV
Sbjct: 7 IKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAV 66
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+ + M + G + + AC+ L G H + I+ ++ D + +L +Y
Sbjct: 67 EVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLY 126
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+K G LD + F+ ++++W +IS NG AG L L +EM EP+ +L
Sbjct: 127 SKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLT 186
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S L C+ I LG +H + + + NL + S++ +Y KCG A+ LF++M+ +
Sbjct: 187 SVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYK 246
Query: 342 DLISWNVIIA-----------SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+LI+WN +IA ++ G EAL ++L++ + KPD T +S+L+ S
Sbjct: 247 NLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSR 306
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+E+G + + A +VD+ + G +E A K MST L W
Sbjct: 307 LAALEQGEQIHAQTIKSGFLSDVVVGTA-LVDMYDKCGSIERARKAFLDMSTRT-LISWT 364
Query: 451 ALLSGCHNH 459
++++ H
Sbjct: 365 SMITSFARH 373
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH + I+ + + V + LV++YAK G + A VF N+ R N+V W L++G+ QN
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
+E+ +M G P + +L AL AC+ + + LGK H + ++ R + +G +
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ +YSK G + F + +D+ISW II++ G +G L LF++M+ V+P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T S+LS S + G L +K + + +V L + G ++EA +
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSL-STKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 438 DSMSTEPGLAVWVALLSG 455
+ M + L W A+++G
Sbjct: 241 NRMEYK-NLITWNAMIAG 257
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 281/508 (55%), Gaps = 9/508 (1%)
Query: 41 VDTYNSIIIAYSRKESPF-EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW 99
V +N+II + S + F + LY QM+ + PD+ T LKAC +I
Sbjct: 102 VYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIH 161
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
+++ G +++FV ++++ Y G + F++ DL+ W+++I G P
Sbjct: 162 AHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPS 221
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL---NLDVKVQT 216
EA+ A+ RM AD + ++ ++ AC+ LGD G + Y + HL + DV +
Sbjct: 222 EAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAY-MDHHLFDVHSDVFLGN 277
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
+L+DMY K G LA +F M N+V+W ++ISG A GL L + MQ+ G +P
Sbjct: 278 ALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKP 337
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALF 335
DSV+LV L +CA +G L+LGK +H Y + + + +++DMY+KCG A +F
Sbjct: 338 DSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVF 397
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
M+ +D+ S+ +I + +HG + AL++F +M V+PDH T +LSA SH+GL+E
Sbjct: 398 QAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLE 457
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EGR F M Y +QP +HY CMVDLL RAG + EA + M P +VW +LL
Sbjct: 458 EGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGA 517
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H K +GE V +K++++ P+ G + L+SN ++ +W + RK M+++ +KK P
Sbjct: 518 CKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTP 577
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIV 543
G S +EV+G +H F +KSH + +++
Sbjct: 578 GCSSIEVDGMVHEFRKGEKSHPKSREMI 605
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 200/377 (53%), Gaps = 12/377 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IKT LS+ ++ Y I + K+F++ P + ++ ++I AYS+ P E +
Sbjct: 165 IKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAI 224
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI--WRKAVELGYGNDVFVGSSMLN 119
+ +M + D T V L AC L D +G++I + +DVF+G+++L+
Sbjct: 225 AAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLD 281
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y+KCG+ + A F M K+LV W+SMI+GL G +EA+ ++RM+ G+ D V
Sbjct: 282 MYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVT 341
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++G++ +CA+LGD G VH Y + H+ D V +LVDMYAK G +D A VF+ M
Sbjct: 342 LVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMK 401
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++ ++ A+I GFA +G A L + EM G PD V+LV L AC+ G L+ G+
Sbjct: 402 CKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRR 461
Query: 300 IHGYTVRRFDFNLVLGT----SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYG 354
H + R ++L T ++D+ + G+ S A A ++M D W ++ +
Sbjct: 462 -HFQDMSRL-YHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACK 519
Query: 355 IHGHGEEALSLFLQMIE 371
IH E ++ ++IE
Sbjct: 520 IHAKVELGETVIQKLIE 536
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 129/248 (52%), Gaps = 7/248 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF +P++ + ++NS+I + + E L ++ +M ++PDS T L +C +
Sbjct: 292 ARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCAN 351
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L DL++G+ + + D +V ++++++Y KCG +++A + F+ M+ KD+ +++M
Sbjct: 352 LGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAM 411
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-- 206
I G +G+ A+ + M + G+ D V ++G++ AC+ G G H + R
Sbjct: 412 IVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRR-HFQDMSRLY 470
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISG---FAQNGLAGST 262
HL + +VD+ + G + A M + + WG+L+ A+ L +
Sbjct: 471 HLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETV 530
Query: 263 LELLMEMQ 270
++ L+EM+
Sbjct: 531 IQKLIEME 538
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 313/543 (57%), Gaps = 6/543 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A ++ ++ V T+NS+I Y + E L ++ MI + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + A L +L G E+ ++ G+ +++ VG++++++Y KC AF
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KDL+ W+++I G N EA++ ++ + K+ ++ DE+++ +++A + L
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H + +R+ L LD +Q LVD+Y K ++ A+ VF+++ ++V+W ++IS A
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG +EL M G DSV+L+ L A A + L G+ IH Y +R+ F +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+DMY+ CG A+A+FD+++ + L+ + +I +YG+HG G+ A+ LF +M V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SH+GL++EGR + +M +Y+++P +HY C+VD+L RA V EA
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAF 744
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M TEP VW ALL+ C +H + IGE A+++L+L P + G LVSN FA +
Sbjct: 745 EFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQG 804
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLY 550
+W +V VR M+ SGM+K PG S +E++G++H F DKSH + YE + V +KL
Sbjct: 805 RWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Query: 551 LEM 553
E+
Sbjct: 865 REV 867
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 197/379 (51%), Gaps = 3/379 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G+++ +YG + A K+F+E+P R +N++I AY P L LY M E V
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP 179
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
S+F LKAC L D++ G E+ V+LGY + F+ ++++++Y K ++ A
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 134 FEKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ Q K D V W+S+++ +G+ E ++ ++ M G + ++ + AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 193 SRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
++ G +H ++ + ++ V +L+ MY + G + A + + M+ ++VTW +LI
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+ QN + LE +M + G + D VS+ S + A ++ L G +H Y ++ +D
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
NL +G ++IDMYSKC + F +M +DLISW +IA Y + EAL LF +
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 371 ETMVKPDHSTFASLLSALS 389
+ ++ D S+L A S
Sbjct: 480 KKRMEIDEMILGSILRASS 498
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 251/490 (51%), Gaps = 6/490 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFE 59
++K + G V ++++Y +D+ +AR+LF+ +G +NSI+ +YS E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSML 118
L L+ +M P+S T AL AC K+G+EI ++ + ++++V ++++
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y +CGKM +A +M D+V W+S+I G V N +EA++ + M G +DEV
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M +I A L + G+ +H Y I+ + +++V +L+DMY+K F M
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++++W +I+G+AQN LEL ++ E D + L S L A + + + + K
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH + +R+ + V+ ++D+Y KC A +F+ ++ +D++SW +I+S ++G+
Sbjct: 508 EIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EA+ LF +M+ET + D +LSA + + +GR ++ K A
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLN 476
+VD+ A G+++ A + D + + GL + ++++ G H K ++ + ++
Sbjct: 628 -VVDMYACCGDLQSAKAVFDRIERK-GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 477 PDDLGIHALV 486
PD + AL+
Sbjct: 686 PDHISFLALL 695
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 3/279 (1%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ ++ +Y KCG +++A F++M + W++MI V NG+P A+ Y M+ E
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ L++ACA L D R G +H ++ + + +LV MYAK L A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 232 SHVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+F + + V W +++S ++ +G + TLEL EM G P+S ++VSAL AC
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 291 IGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ KLGK IH ++ + L + ++I MY++CG A + QM + D+++WN
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+I Y + +EAL F MI K D + S+++A
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 288 CAQIGFLKLGKSIHGYTVRRF-DFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
C + + G+ +H + F F L L ++ MY KCG A +FD+M R +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFA 149
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I +Y +G AL+L+ M V S+F +LL A + + G L+V
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
K T +V + A+ ++ A ++ D + +W ++LS
Sbjct: 210 -KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 287/506 (56%), Gaps = 1/506 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+ +ARK+F+ +P R V ++ S++ + E L L+N+M +E + P
Sbjct: 168 LVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPS 227
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L L G I ++ G ++ F+ ++ML++YVKCG+ +A F+
Sbjct: 228 EYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFD 287
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ DLV W++MI G NG P +A+ + K I + V + ++ A A L +
Sbjct: 288 ELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSL 347
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+HG S++ + V +LVDMYAK L A +F + ++VTW +LI+G+A+
Sbjct: 348 GRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAE 407
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N + L L M+ G PD++S+V+AL AC +G L +GK H Y V+ F N+ +
Sbjct: 408 NDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYV 467
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++++Y+KC A+ +F +M R+ ++W +I YG+ G ++ LF +M++ +
Sbjct: 468 NTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNI 527
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ + F S+LS SH+G+V G+ F+ M + I P+ KHYACMVD+LARAG +EEAL
Sbjct: 528 QPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEAL 587
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M + ++W A L GC H + E+ +++ L+PD ++SN +
Sbjct: 588 EFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYG 647
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W++ +RK M++ G+ K+PG S V
Sbjct: 648 RWDKSLAIRKLMKERGLVKLPGCSSV 673
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 226/444 (50%), Gaps = 6/444 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DV 72
++++ Y D+ SAR++ +E P TY + ++ E + ++ M +
Sbjct: 65 KLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAE 124
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ D ++ALKA V D G + V+ G G D+FV ++++++Y K G + A
Sbjct: 125 QEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARK 183
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ +++V W+SM++G + NG +E + + M++E I E M ++ AC LG
Sbjct: 184 VFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGS 243
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG ++ L + + +++DMY K G + A VF +S +++V W +I G
Sbjct: 244 LHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVG 303
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-N 311
+ QNG L L ++ + P+SV++ + L A AQ+ L LG+SIHG +V+ N
Sbjct: 304 YTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEN 363
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V+ +++DMY+KC S A+ +F ++ ++D+++WN +IA Y + G +AL LF M
Sbjct: 364 DVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRV 423
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
PD + + LSA G + G+ F K+ +++L + ++
Sbjct: 424 QGSLPDAISVVNALSACVCLGDLLIGK-CFHTYAVKHAFMSNIYVNTALLNLYNKCADLP 482
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A ++ M+ + W A++ G
Sbjct: 483 SAQRVFSEMN-DRNTVTWGAMIGG 505
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 306/537 (56%), Gaps = 3/537 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG + + A +F+ + R V ++ +++ Y ++ + L L +M V+P+
Sbjct: 45 LIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPN 104
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ +LKAC +L ++ G +I V+ G+ VG++ +++Y KCG++ A F
Sbjct: 105 EFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFN 164
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM ++LV W++MI G G R+++ ++RM+ +G DE ++AC LG R
Sbjct: 165 KMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRG 224
Query: 196 GLSVHGYSIRRHLNLDVK--VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H I R + ++ + +++VD+YAK G+L A VF + + N+++W ALI GF
Sbjct: 225 GTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGF 284
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
AQ G ++L +++ D L + A + ++ GK +H Y ++ ++
Sbjct: 285 AQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDI 344
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S+IDMY KCG+ A LF +MQ R+++SW V+I YG HG GE+A+ LF +M
Sbjct: 345 SVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLD 404
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++ D + +LLSA SHSGL+ E + +F + + ++++P +HYACMVD+L RAG+++E
Sbjct: 405 GIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKE 464
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++++M +P +W LLS C H IG +V + + +++ D+ + ++SN +A
Sbjct: 465 AKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAE 524
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W+E VRK ++ G+KK G S VE+N E+H F D +H E I +LK++
Sbjct: 525 AGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEM 581
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 199/391 (50%), Gaps = 14/391 (3%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C G ++ AV +G+G D+ + + ++++Y KC +++ A F++M +++
Sbjct: 11 LRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNV 70
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W++++ G + G + ++ M G+ +E ++AC LG G+ +HG
Sbjct: 71 VSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGM 130
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
++ V + +DMY+K G + +A VF M N+V+W A+I+G G +
Sbjct: 131 CVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKS 190
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL--VLGTSVI 319
L L MQ G PD + S L AC +G ++ G IH + R F ++ ++ ++++
Sbjct: 191 LVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIV 250
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
D+Y+KCG A+ +FD+++ ++LISW+ +I + G+ EA+ LF Q+ E++ D
Sbjct: 251 DLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGF 310
Query: 380 TFASLLSALSHSGLVEEGR--YWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ ++ + LVE+G+ + + L V S I ++D+ + G EEA ++
Sbjct: 311 VLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANS----IIDMYLKCGLTEEAERL 366
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
M + W +++G + K +GEK
Sbjct: 367 FSEMQVR-NVVSWTVMITG---YGKHGLGEK 393
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 146/275 (53%), Gaps = 3/275 (1%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++ C+ G GL VH ++ D+ + L+DMY K +DLA VF M N
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W AL+ G+ Q G A +L LL EM G +P+ + ++L AC +G ++ G IHG
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
V+ F++ V+G + IDMYSKCG A +F++M R+L+SWN +IA + G+G +
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACM 420
+L LF +M PD TF S L A G + G + L+ + I + +
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
VDL A+ G + EA K+ D + + L W AL+ G
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIE-QKNLISWSALIQG 283
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 315/559 (56%), Gaps = 5/559 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + AR++F ++ ++ T+N++I Y++ + L+ MI V PD
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PD 321
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T ++AC DL++G+ + + + G+ D + ++++Y KCG + A F+
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD V W+S+ING +G +E ++++K MK E D V + L+ + L D
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQ 440
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ ++ + SL+D+YAK G +D VF MS +I++W +I+
Sbjct: 441 GRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVH 500
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+++ EM++ G PD +++ L C+ + + GK IHGY + F+ N+ +
Sbjct: 501 FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPI 560
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG +F M+ +D+++W +I+++G++G G++AL F M + V
Sbjct: 561 GNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGV 620
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD F + + A SHSG+V+EG +FD M + Y ++P +HYAC+VDLLAR+G + +A
Sbjct: 621 LPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE 680
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM +P ++W ALLS C +I ++V+KK+L+LN DD G + LVSN +A
Sbjct: 681 EFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLG 740
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM- 553
KW++V VR +M+ G+KK PG S +E+ ++ F DKS QY+ + +L+ L M
Sbjct: 741 KWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMA 800
Query: 554 -RAISSWLQGHMEEHEEHD 571
+ LQ + + EE D
Sbjct: 801 KEGYVADLQFALHDVEEDD 819
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 282/518 (54%), Gaps = 17/518 (3%)
Query: 14 GRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G++I+ Y D +S+ +F + P V +NSII A + + LG Y +M ++ +
Sbjct: 58 GKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKL 117
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ TF + +C ++DL++G + A+E+G+ +D+++G++++++Y + ++ A
Sbjct: 118 QPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARY 177
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
FE+M +D V W+S+I+G NG +A+D Y + + G+ D M ++ AC L
Sbjct: 178 VFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMA 237
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G++VHG + + DV + L+ MY K L A VF M+ + VTW +I G
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFN 311
+AQ G ++++L M+M GF PD +S+ S + AC Q G L++GK +H Y + F+ +
Sbjct: 298 YAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECD 356
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V +IDMY+KCG A+ +FD + +D ++WN +I Y G+ +E L F +M++
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMK 415
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KPD TF LLS S + +GR V K+ + ++D+ A+ GE++
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGR-GIHCDVIKFGFEAELIIGNSLLDVYAKCGEMD 474
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDD---LGIHALV 486
+ LK+ MS ++ W +++ + ++G ++ ++ L PD+ LGI +
Sbjct: 475 DLLKVFSYMSAHDIIS-WNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMC 533
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMK-KVP-GYSVVEV 522
S A+ ++ +E+ G + KSG + VP G +++E+
Sbjct: 534 S-LLAVRRQGKEIHGY---IFKSGFESNVPIGNALIEM 567
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 2/202 (0%)
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQN 256
+VH I L+L V L+ YA+ + VF+++S N+ W ++I N
Sbjct: 40 TVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHN 99
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
GL L EM+ +PD+ + S + +CA+I L+LG +H + + F+ +L +G
Sbjct: 100 GLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++IDMYS+ AR +F++M +RD +SWN +I+ Y +G E+AL ++ + T +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 376 PDHSTFASLLSALSHSGLVEEG 397
PD T +S+L A V+EG
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEG 241
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 300/536 (55%), Gaps = 5/536 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
GK D A LF+++P+R + ++N++II +S+ S V L+ M RPD++T
Sbjct: 101 GKVD--DAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIG 158
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR-- 139
+A +S L+ + + +E G D V ++ + Y KCG++ A + F +Q+
Sbjct: 159 LTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTA 218
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+ V W+S+I G+ +AV +YK + +G D ++ L+ +C +G +
Sbjct: 219 RSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLI 278
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG+ + + D+ + +L+ MY++ G + A+ +F MS V+W A+ISG+++ G
Sbjct: 279 HGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRV 338
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSV 318
L L M+ G +PD V+++S + C + G L LG I Y ++ ++V+ ++
Sbjct: 339 DDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNAL 398
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
IDMY+KCG + AR +F + +R ++SW +IA+ ++G EAL LF + E+ ++P++
Sbjct: 399 IDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNN 458
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TF ++L A H G +E+GR F +M +Y I P HY+CM+DLL R G++ EAL+++
Sbjct: 459 ITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQ 518
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
M +P +W ALL C H IGE V++ + +L P ++N +A +W+E
Sbjct: 519 DMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDE 578
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
VA +RKTMR + M+K PG SVV+VNG H F +ED+SH+ I L L ++M+
Sbjct: 579 VAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMK 634
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 216/422 (51%), Gaps = 5/422 (1%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NS I + + + L L++Q+ ++P++ TF KAC L L + I V
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ + +D++V ++M+++YVKCGK+++A F+KM +++ W++MI G G +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ M+ G D ++GL +A RF +VH I L+ D V + + Y+
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 224 KTGHLDLASHVFKNMSRI--NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
K G L LA VF + + + V+W +LI+ +A G ++ + GF+PD+ ++
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+S L +C Q L G IHG+ + D ++ L ++I MYS+CG S A LFD M
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
R +SW +I+ Y G ++AL LF M ET KPD T SL+S +G + G +W
Sbjct: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLG-HW 378
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
D S ++++ ++D+ A+ G + +A +I S+ + W A+++ C +
Sbjct: 379 IDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRT-VVSWTAMIAACALNG 437
Query: 461 KF 462
+F
Sbjct: 438 EF 439
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 156/341 (45%), Gaps = 25/341 (7%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ + + F K+ L W+S I G V G +A+ + ++K G+ + L +A
Sbjct: 4 LTQHLNCFSKLST--LTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKA 61
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA L +H + ++ D+ VQT++VDMY K G +D A ++F M NI +W
Sbjct: 62 CAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASW 121
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+I GF+Q G L M M+ G PD+ +++ A L+ K++H +
Sbjct: 122 NAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIE 181
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ--SRDLISWNVIIASYGIHGHGEEAL 363
D + + + I YSKCG A+ +F +Q +R +SWN +IA Y G +A+
Sbjct: 182 TGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAV 241
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC---- 419
+ ++ KPD ST SLLS+ + ++ + I C
Sbjct: 242 KSYKGLLCDGFKPDASTIISLLSSCQQP----------EALIYGFLIHGHGFQLGCDSDI 291
Query: 420 -----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + +R G++ A + D MS ++ W A++SG
Sbjct: 292 SLINTLISMYSRCGDISSATILFDGMSIRTCVS-WTAMISG 331
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I++Y DI SA LF+ + +R ++ ++I YS + L L+N M +
Sbjct: 294 INTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGE 353
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD T + C L +G I A DV V ++++++Y KCG +N+A
Sbjct: 354 KPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDARE 413
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F + + +V W++MI NG+ REA+D + + + GI+ + + + ++QAC G
Sbjct: 414 IFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGY 473
Query: 193 SRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G R+ +N + + ++D+ + G L A V ++M + + WGAL+
Sbjct: 474 LEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALL 533
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 283/496 (57%), Gaps = 7/496 (1%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+++ ++ P T+ + + C L + R ++ G D F+ + ++ +Y G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
++ A F+K +++ + W+++ L G E + Y +M + G+++D +++
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 186 AC----ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
AC + G +H + RR + V + T+LVDMYA+ G +D AS+VF M
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+V+W A+I+ +A+NG A L EM ++ P+SV++VS L ACA + L+ GK
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHGY +RR D L + ++++ MY +CG + +FD+M RD++SWN +I+SYG+HG+
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G++A+ +F +M+ P TF S+L A SH GLVEEG+ F+ M + I+P +HYA
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL RA ++EA K+V M TEPG VW +LL C H + E+ ++++ L P
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L+++ +A Q W+EV V+K + G++K+PG +EV ++++F+ D+ +
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPL 546
Query: 539 YEDIVYVLKKLYLEMR 554
E I L KL +M+
Sbjct: 547 MEQIHAFLVKLAEDMK 562
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 182/357 (50%), Gaps = 9/357 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y + ARK+F++ R + +N++ A + EVLGLY +M + V
Sbjct: 117 KLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176
Query: 75 DSSTFTVALKACV----SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV ++ L G+EI GY + V++ ++++++Y + G ++ A
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F M +++V WS+MI NG+ EA+ ++ M +E D+ + V M+ ++QACA
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +RR L+ + V ++LV MY + G L++ VF M ++V+W +
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNS 356
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LIS + +G +++ EM + G P V+ VS L AC+ G ++ GK + R
Sbjct: 357 LISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH 416
Query: 309 DFNLVLG--TSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ ++D+ + + A+ + D W ++ S IHG+ E A
Sbjct: 417 GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ L + + ++ +YG + +++F+ + R V ++NS+I +Y +
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSS 116
+ ++ +M+ P TF L AC ++ G E +WR + G + +
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR---DHGIKPQIEHYAC 427
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKD-LVCWSSMINGLVFNGQPREAVDAYKRM-KKEGID 174
M++L + +++EA + M+ + W S++ +G A A +R+ E +
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 175 ADEVVMMGLIQACADLGD 192
A V++ I A A + D
Sbjct: 488 AGNYVLLADIYAEAQMWD 505
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 271/472 (57%), Gaps = 2/472 (0%)
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
T L++CV+ L+ G ++ + + G G D + + +++LY CG++ A F+ M +
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+++ W+ +I G AV Y+ M + G++ D +++ACA L D G V
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H DV V +VDMYAK G +D A VF ++ + V W ++I+ + QNG
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L L +M + G P +LVSA+ A A L G+ +HG+ RR F L TS+
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSL 305
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPD 377
+DMY+K G AR LF+Q+ R+L+SWN +I YG+HGH +EAL+LF +M + V PD
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+ TF +LSA +H G+VEE + +F LMV+ Y I+PT +HY C++D+L G EEA ++
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLI 425
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
MS EP +W ALL+GC HK +GE +K+++L P+D G + +SN +A KWE
Sbjct: 426 KGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWE 485
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ A VRK M G+KK+ S +E+ G+ H F++ D SH + ++I L++L
Sbjct: 486 KAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERL 537
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 198/397 (49%), Gaps = 5/397 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ LY + AR+LF+ +P R V +N +I AY+R+ + LY M++ V P
Sbjct: 102 KLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEP 161
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T+ + LKAC +L+DL+ G E+ ++ +G DVFV + ++++Y KCG +++A F
Sbjct: 162 DNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVF 221
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ + +D V W+SMI NG+P EA+ + M GI ++ + A AD
Sbjct: 222 DGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALP 281
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ RR L K++TSLVDMYAK+G + +A +F+ + + +V+W A+I G+
Sbjct: 282 RGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYG 341
Query: 255 QNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G A L L +M+ PD+++ V L AC G ++ K V +
Sbjct: 342 MHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPT 401
Query: 314 LG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ T VID+ G A L M D W ++ IH + E L LQ +
Sbjct: 402 VQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELG-ELALQKL 460
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+ D + L + + SG E+ LM ++
Sbjct: 461 IELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNR 497
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 315/559 (56%), Gaps = 5/559 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + AR++F ++ ++ T+N++I Y++ + L+ MI V PD
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PD 321
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T ++AC DL++G+ + + + G+ D + ++++Y KCG + A F+
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD V W+S+ING +G +E ++++K MK E D V + L+ + L D
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQ 440
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ ++ + SL+D+YAK G +D VF MS +I++W +I+
Sbjct: 441 GRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVH 500
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+++ EM++ G PD +++ L C+ + + GK IHGY + F+ N+ +
Sbjct: 501 FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPI 560
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG +F M+ +D+++W +I+++G++G G++AL F M + V
Sbjct: 561 GNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGV 620
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD F + + A SHSG+V+EG +FD M + Y ++P +HYAC+VDLLAR+G + +A
Sbjct: 621 LPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE 680
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + SM +P ++W ALLS C +I ++V+KK+L+LN DD G + LVSN +A
Sbjct: 681 EFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLG 740
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM- 553
KW++V VR +M+ G+KK PG S +E+ ++ F DKS QY+ + +L+ L M
Sbjct: 741 KWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMA 800
Query: 554 -RAISSWLQGHMEEHEEHD 571
+ LQ + + EE D
Sbjct: 801 KEGYVADLQFALHDVEEDD 819
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 296/555 (53%), Gaps = 29/555 (5%)
Query: 14 GRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G++I+ Y D +S+ +F + P V +NSII A + + LG Y +M ++ +
Sbjct: 58 GKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKL 117
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ TF + +C ++DL++G + A+E+G+ +D+++G++++++Y + ++ A
Sbjct: 118 QPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARY 177
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
FE+M +D V W+S+I+G NG +A+D Y + + G+ D M ++ AC L
Sbjct: 178 VFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMA 237
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G++VHG + + DV + L+ MY K L A VF M+ + VTW +I G
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFN 311
+AQ G ++++L M+M GF PD +S+ S + AC Q G L++GK +H Y + F+ +
Sbjct: 298 YAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECD 356
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V +IDMY+KCG A+ +FD + +D ++WN +I Y G+ +E L F +M++
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMK 415
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KPD TF LLS S + +GR V K+ + ++D+ A+ GE++
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGR-GIHCDVIKFGFEAELIIGNSLLDVYAKCGEMD 474
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDD---LGIHALV 486
+ LK+ MS ++ W +++ + ++G ++ ++ L PD+ LGI +
Sbjct: 475 DLLKVFSYMSAHDIIS-WNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMC 533
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMK-KVP-GYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
S A+ ++ +E+ G + KSG + VP G +++E+ + + E+ +
Sbjct: 534 S-LLAVRRQGKEIHGY---IFKSGFESNVPIGNALIEMYSKCGSL----------ENCIK 579
Query: 545 VLKKLYLEMRAISSW 559
V K Y++ + + +W
Sbjct: 580 VFK--YMKEKDVVTW 592
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 2/202 (0%)
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQN 256
+VH I L+L V L+ YA+ + VF+++S N+ W ++I N
Sbjct: 40 TVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHN 99
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
GL L EM+ +PD+ + S + +CA+I L+LG +H + + F+ +L +G
Sbjct: 100 GLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++IDMYS+ AR +F++M +RD +SWN +I+ Y +G E+AL ++ + T +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 376 PDHSTFASLLSALSHSGLVEEG 397
PD T +S+L A V+EG
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEG 241
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 299/541 (55%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + A +F + + ++ +N+++ AY ++ + L L+ M ++ V PD
Sbjct: 812 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPD 871
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + + C G+ + + + + + S++L LY KCG +A + F+
Sbjct: 872 SFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFK 931
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACADLGDS 193
M+ KD+V W S+I+GL NG+ +EA+ + MK + + D +M +I ACA L
Sbjct: 932 SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEAL 991
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
FGL VHG I+ L+V V +SL+D+Y+K G ++A VF +M NIV W ++IS +
Sbjct: 992 SFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCY 1051
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
++N L ++EL M S G PDSVS+ S L+A + L GKS+HGYT+R +
Sbjct: 1052 SRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 1111
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY KCG A +F +MQ + LI+WN++I YG HG ALSLF ++ +
Sbjct: 1112 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKA 1171
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD TF SL+SA +HSG VEEG+ +F++M Y I+P +HYA MVDLL RAG +EE
Sbjct: 1172 GETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEE 1231
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + +M TE ++W+ LLS H +G A+K+L++ P+ + + N +
Sbjct: 1232 AYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYME 1291
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E A + M++ G++K PG S +EV+ + F S +I VL +L
Sbjct: 1292 AGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSN 1351
Query: 553 M 553
M
Sbjct: 1352 M 1352
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 227/454 (50%), Gaps = 17/454 (3%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N +I+ + E L LY V+ S++FT AL AC + G +I V
Sbjct: 739 WNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVV 798
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
++G ND +V +S+L++Y KCG + EA F + K L W++M+ V N A++
Sbjct: 799 KMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALE 858
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ M+++ + D + +I C+ G +G SVH +R + ++++L+ +Y+
Sbjct: 859 LFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYS 918
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ--SCGFEPDSVSL 281
K G A VFK+M ++V WG+LISG +NG L++ +M+ +PDS +
Sbjct: 919 KCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 978
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
S + ACA + L G +HG ++ N+ +G+S+ID+YSKCG+P A +F M+
Sbjct: 979 TSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRP 1038
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR-- 398
++++WN +I+ Y + E ++ LF M+ + PD + S+L A+S + + +G+
Sbjct: 1039 ENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 1098
Query: 399 --YWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
Y L + P++ H ++D+ + G + A I M + L W ++ G
Sbjct: 1099 HGYTLRLGI------PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLITWNLMIYG 1151
Query: 456 CHNHKKFSIGEKVAKKVLKL--NPDDLGIHALVS 487
+H + ++ K PDD+ +L+S
Sbjct: 1152 YGSHGDCRTALSLFDELKKAGETPDDVTFLSLIS 1185
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 11/400 (2%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF LKAC SL +L G+ I + LG+ D F+ +S++N+YVKCG ++ A+ F+
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 138 QR-----KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+ +D+ +SMI+G + +E V ++RM G+ D + ++ G+
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGN 682
Query: 193 SRF--GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGAL 249
R G +HGY +R L+ D ++T+L+DMY K G A VF + + N+V W +
Sbjct: 683 FRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVM 742
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I GF + + S+LEL M +S + S S AL AC+Q G+ IH V+
Sbjct: 743 IVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGL 802
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D + + TS++ MYSKCG+ A +F + + L WN ++A+Y + +G AL LF
Sbjct: 803 DNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGF 862
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M + V PD T ++++S S GL + G+ + K IQ T + ++ L ++ G
Sbjct: 863 MRQKSVLPDSFTLSNVISCCSMFGLYDYGKS-VHAELFKRPIQSTPAIESALLTLYSKCG 921
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+A + SM E + W +L+SG + KF KV
Sbjct: 922 CDTDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKV 960
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 208/441 (47%), Gaps = 31/441 (7%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM--GE 96
R V NS+I Y + E +G + +M+ VRPD+ + ++ + + + G+
Sbjct: 630 RDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGK 689
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK-DLVCWSSMINGLVFN 155
+I + D F+ ++++++Y K G +A F +++ K ++V W+ MI G +
Sbjct: 690 QIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGS 749
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
+++ Y K + G + AC+ +S FG +H ++ L+ D V
Sbjct: 750 EICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVS 809
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
TSL+ MY+K G + A VF + + W A+++ + +N S LEL M+
Sbjct: 810 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVL 869
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
PDS +L + + C+ G GKS+H +R + ++++ +YSKCG + A +
Sbjct: 870 PDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLV 929
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI--ETMVKPDHSTFASLLSALS--- 389
F M+ +D+++W +I+ +G +EAL +F M + +KPD S+++A +
Sbjct: 930 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLE 989
Query: 390 --------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
H +++ G+ ++ V + ++DL ++ G E ALK+ SM
Sbjct: 990 ALSFGLQVHGSMIKTGQV-LNVFVG-----------SSLIDLYSKCGLPEMALKVFTSMR 1037
Query: 442 TEPGLAVWVALLSGCHNHKKF 462
E + W +++S C++
Sbjct: 1038 PE-NIVAWNSMIS-CYSRNNL 1056
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 307/557 (55%), Gaps = 33/557 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A KLF ++P V +N++I +S+ + E + LY M+KE V PDS TF L
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 89 LMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L G+++ V+ G G++++V ++++ +Y CG M+ A F++ ++D+ W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI+G + E+++ M++ + V ++ ++ AC+ + D VH Y
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG---------- 257
++++ +LV+ YA G +D+A +F++M ++++W +++ G+ + G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 258 ------------------LAG---STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
AG +LE+ EMQS G PD ++VS L ACA +G L++
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ I Y + + ++V+G ++IDMY KCG A+ +F M RD +W ++
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G G+EA+ +F QM + ++PD T+ +LSA +HSG+V++ R +F M S ++I+P+
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLV 506
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVD+L RAG V+EA +I+ M P VW ALL H + E AKK+L+L
Sbjct: 507 HYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
PD+ ++AL+ N +A ++W+++ VR+ + +KK PG+S++EVNG H F+ DKS
Sbjct: 567 EPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKS 626
Query: 536 HNQYEDIVYVLKKLYLE 552
H Q E+I L++L E
Sbjct: 627 HLQSEEIYMKLEELAQE 643
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 207/475 (43%), Gaps = 47/475 (9%)
Query: 55 ESPFEV-LGLYNQM----IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN 109
+SPF L ++ + I E + D S F L C + K ++ +++ G
Sbjct: 8 KSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAP 64
Query: 110 DVFVGSSMLNLYVK--CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
+ + + G ++ A F K+ D+V W++MI G E V Y
Sbjct: 65 NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 168 MKKEGIDADEVVMMGLIQACA-DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M KEG+ D L+ D G G +H + ++ L ++ VQ +LV MY+ G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+D+A VF + ++ +W +ISG+ + ++ELL+EM+ P SV+L+ L
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 287 ACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC--------------- 330
AC+++ L K +H Y + + +L L ++++ Y+ CG
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 331 ----------------ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
AR FDQM RD ISW ++I Y G E+L +F +M +
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T S+L+A +H G +E G W + K KI+ ++D+ + G E+A
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV--LKLNPDDLGIHALVS 487
K+ M W A++ G N+ + KV ++ + + PDD+ ++S
Sbjct: 424 KVFHDMDQRDKFT-WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ Y + ++ AR F+++P+R ++ +I Y R E L ++ +M + PD
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L L++GE I + NDV VG++++++Y KCG +A F
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D W++M+ GL NGQ +EA+ + +M+ I D++ +G++ AC +
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC-----NHS 482
Query: 196 GLSVHGYSIRRHLNLDVKVQTSL------VDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
G+ + D +++ SL VDM + G + A + + M N + WGA
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGA 542
Query: 249 LI 250
L+
Sbjct: 543 LL 544
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 304/560 (54%), Gaps = 11/560 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK NL ++I+ + + + A +F ++ V YN++I A+ + +
Sbjct: 46 IIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKA 105
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ M K + D+ T+ LKAC L + I + G+ D+FV +S+++
Sbjct: 106 FATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDS 165
Query: 121 YVKCGKM--NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y KCG + N AM F +M KDLV W+SMI GLV G A + M + +
Sbjct: 166 YSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNT 225
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ G ++A G+ ++ R +V +++V Y KTG +++A +F M
Sbjct: 226 ILDGYVKA----GEMSQAFNLFEKMPER----NVVSWSTMVSGYCKTGDMEMARMLFDKM 277
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+VTW +ISGFA+ GLA L +M++ G +PD +L+S L ACA+ G L LGK
Sbjct: 278 PFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGK 337
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + R ++ + +++DMY+KCG A ++F++M RDL+SWN ++ +HG
Sbjct: 338 KVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHG 397
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
HGE+A+ LF +M + KPD T ++L A +H+G V++G +F+ M + I P +HY
Sbjct: 398 HGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHY 457
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CM+DLL R G +EEA ++V SM EP +W LL C H + EKV +++ L
Sbjct: 458 GCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQ 517
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
D G ++++SN FA W VA +R M+ +G++K G S +E++ E+H F + DKSH
Sbjct: 518 SDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHP 577
Query: 538 QYEDIVYVLKKLYLEMRAIS 557
+ + I +L KL +++ ++
Sbjct: 578 ETDKIYQILVKLGQDLKQVA 597
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 202/404 (50%), Gaps = 21/404 (5%)
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
D +E+ + ++ ND++V +++ + C +MN A+ F ++Q ++ ++++I
Sbjct: 35 DFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIR 94
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
V N Q +A + M+K G+ AD L++AC G +H + +
Sbjct: 95 AHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFG 154
Query: 211 DVKVQTSLVDMYAKTGHL--DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D+ V SL+D Y+K G L + A +F M ++V+W ++I G + G G +L E
Sbjct: 155 DLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDE 214
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYSKCG 326
M E D+VS + L G++K G+ + + + + N+V ++++ Y K G
Sbjct: 215 MA----ERDAVSWNTIL-----DGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTG 265
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD+M ++L++W +II+ + G +EA +L+ QM +KPD T S+L+
Sbjct: 266 DMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILA 325
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A + SGL+ G+ + K +I+ + +VD+ A+ G V++AL I + MS L
Sbjct: 326 ACAESGLLVLGKK-VHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMR-DL 383
Query: 447 AVWVALLSGC----HNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
W +L G H K + K+ ++ K PD + + A++
Sbjct: 384 VSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFK--PDKVTLIAIL 425
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 305/552 (55%), Gaps = 14/552 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +IA Y ++ I A LF+++P + ++N++I AY+ + L L+ +M +
Sbjct: 76 SFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMG 135
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ D TF+ + AC + + L ++ A G+ + V V +S+L Y K G + EA
Sbjct: 136 LVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAE 193
Query: 132 VAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDA---YKRMKKEGIDADEVVMMGLIQA 186
+ F M + +D V W+SMI V GQ + + A Y+ M G + D + ++
Sbjct: 194 MVFNGMGEEVRDEVSWNSMI---VAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH-LDLASHVFKNMSRINIVT 245
+ + D GL H +I+ N + V + L+DMYAK G + + VF+ + ++V
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310
Query: 246 WGALISGFAQNG-LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W +ISG++QN L+ LE +MQ G+ PD S V A+ AC+ + GK H
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370
Query: 305 VRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
++ + + +++ MYSKCG AR LF +M + ++ N IIA Y HG G E+
Sbjct: 371 MKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTES 430
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L+LF QM+ + P T S+LSA +H+G VEEG+ +F++M + I+P +HY+CM+D
Sbjct: 431 LNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMID 490
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
LL RAG++ EA +++D+M PG A W ALL C + + EK A + L+L P +
Sbjct: 491 LLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ ++++ ++ +KWEE A +RK MR G++K PG S +E+N +H F+ ED SH + ++I
Sbjct: 551 YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEI 610
Query: 543 VYVLKKLYLEMR 554
L +++++M+
Sbjct: 611 HMYLDEMFVKMK 622
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 163/339 (48%), Gaps = 13/339 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+VF ++++ Y K ++ A F+++ + DLV ++++IN G A+ + M+
Sbjct: 73 NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGL--SVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ G+ D G+I AC + GL +H + + V V+ SL+ Y+K G
Sbjct: 133 EMGLVMDGFTFSGVITACCN----HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 228 LDLASHVFKNMSR--INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
L+ A VF M + V+W ++I + Q+ L L +M GFE D +L S L
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVP-SCARALFDQMQSRDL 343
+ + L G H ++ F+ N +G+ +IDMY+KCG S +R +F+++ DL
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDL 308
Query: 344 ISWNVIIASYGIHGH-GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+ WN +I+ Y + EAL F QM PD +F +SA S+ +G+ F
Sbjct: 309 VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ-FH 367
Query: 403 LMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIVDSM 440
+ K +I + +V + ++ G +++A K+ M
Sbjct: 368 ALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRM 406
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 280 SLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
S L +C L GKS+H Y + L I +YSKC + + A F+Q
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
++ S+N +IA+Y E + + + + + +PD +F +L++A + G
Sbjct: 70 HEPNVFSFNALIAAYA----KESLIHVAHHLFDQIPQPDLVSFNTLINAYADRG 119
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 299/544 (54%), Gaps = 9/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + LFE + + + ++ SII ++++ E L ++ +MI E P
Sbjct: 193 LVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHP 252
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F A +AC ++ + GE+I +++ D++VG S+ ++Y +C ++ A VAF
Sbjct: 253 NEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAF 312
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+S++N G EA+ + M+ G+ D + + GL+ AC
Sbjct: 313 YRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 372
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y ++ L+ DV V SL+ MYA+ L A VF + ++VTW ++++ A
Sbjct: 373 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 432
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV- 313
Q+ L+L + D +SL + L A A++G+ ++ K +H Y F LV
Sbjct: 433 QHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYA---FKAGLVD 489
Query: 314 ---LGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L ++ID Y+KCG A LF+ M +RD+ SW+ +I Y G+ +EA LF +M
Sbjct: 490 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRM 549
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++P+H TF +L+A S G V EG Y++ +M +Y I PT +H +C+VDLLARAG+
Sbjct: 550 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 609
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ EA +D M EP + +W LL+ H +G++ A+ +L ++P + L+ N
Sbjct: 610 LTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNI 669
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A W E A ++K MR SG+KK PG S V++ GEL FI+ED+SH + E+I +L+ +
Sbjct: 670 YAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELI 729
Query: 550 YLEM 553
+EM
Sbjct: 730 GMEM 733
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 237/455 (52%), Gaps = 15/455 (3%)
Query: 10 GNSV--GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
GN+V +I +YG SAR++F+E+P R ++ S+I A+ + + LGL++ M
Sbjct: 84 GNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSM 143
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
++ D A++AC L D+ G ++ A++ G+D+ V ++++ +Y K G +
Sbjct: 144 LRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLV 203
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQA 186
++ + FE+++ KDL+ W S+I G G EA+ ++ M EG +E +A
Sbjct: 204 DDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRA 263
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C +G +G +HG SI+ L+ D+ V SL DMYA+ +LD A F + ++V+W
Sbjct: 264 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSW 323
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++++ ++ GL L L EM+ G PD +++ L AC L G+ IH Y V+
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 383
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D ++ + S++ MY++C S A +F +++ +D+++WN I+ + H H EE L L
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 443
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDL-MVSKYKIQPTEKHYACM 420
F + ++ D + ++LSA + G E + Y F +V + T +
Sbjct: 444 FSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT------L 497
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+D A+ G +++A+++ + M + W +L+ G
Sbjct: 498 IDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVG 532
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 201/394 (51%), Gaps = 13/394 (3%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAV-------ELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ + AC L L G + R V + + +G+ ++ +Y +C + A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++M ++ V W+S+I V NG+ +A+ + M + G AD+ + ++AC +LG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D G VH ++++ D+ VQ +LV MY+K G +D +F+ + ++++WG++I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 252 GFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
GFAQ G L++ EM G P+ SA AC +G + G+ IHG +++ R D
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L +G S+ DMY++C AR F ++++ DL+SWN I+ +Y + G EAL LF +M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ ++PD T LL A + GR +V K + ++ + AR +
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLV-KLGLDGDVSVCNSLLSMYARCSD 405
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGC--HNHKK 461
+ A+ + + + + W ++L+ C HNH +
Sbjct: 406 LSSAMDVFHEIKDQD-VVTWNSILTACAQHNHPE 438
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + ++++Y +D+ SA +F E+ + V T+NSI+ A ++ P EV
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L++ + K + D + L A L +M +++ A + G +D + +++++
Sbjct: 441 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500
Query: 121 YVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG +++AM FE M +D+ WSS+I G G +EA D + RM+ GI + V
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 560
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ---TSLVDMYAKTGHLDLASHVFK 236
+G++ AC+ +G G + YSI V + + +VD+ A+ G L A++
Sbjct: 561 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 237 NMS-RINIVTWGALISGFAQNGLAGSTLELLMEM 269
M +I+ W L LA S + MEM
Sbjct: 619 QMPFEPDIIMWKTL--------LAASKMHNDMEM 644
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 302/544 (55%), Gaps = 15/544 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS +I +Y I SA +F E+P+R + ++NS+I Y + L + +M
Sbjct: 164 GNS---LIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQA 220
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEI----WRKAVELGYGNDVFVGSSMLNLYVKCG 125
++ D + L AC L+ G+EI R +EL DV V +S++++Y KCG
Sbjct: 221 SGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLEL----DVMVQTSLVDMYAKCG 276
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG--IDADEVVMMGL 183
+M+ A F+++ K +V W++MI G N Q E+ AY R +EG + D + M+ L
Sbjct: 277 RMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESF-AYVRKMQEGGKLHPDWITMINL 335
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CA L G SVHG++IR + ++T+LVDMY + G L A +F M+ N+
Sbjct: 336 LPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNL 395
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
++W A+I+ + +NG + L ++ + +PD+ ++ S L A A++ L+ + IHGY
Sbjct: 396 ISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGY 455
Query: 304 TVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ + D N + S++ MY KCG AR +FD+M +D+ISWN +I +Y IHG G +
Sbjct: 456 VTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRIS 515
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
+ LF +M E +P+ STF SLL + S +GLV EG +F+ M Y I P +HY C++D
Sbjct: 516 IELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILD 575
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
L+ R G ++ A ++ M P +W +LL+ N + E A+ +L L D+ G
Sbjct: 576 LIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGC 635
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ L+SN +A +WE+V ++ M+K G++K G SVV+++ + F+ +D+S N+ +
Sbjct: 636 YVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMV 695
Query: 543 VYVL 546
VL
Sbjct: 696 YDVL 699
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 241/434 (55%), Gaps = 7/434 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTY--NSIIIAYSRKESPFEVLGLYNQMIK 69
S+ R ++ Y + + +A LFE + R DT+ N +I + ++ + Y++M
Sbjct: 62 SLTRALSSYVERGYMKNALDLFENM--RQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEF 119
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
VR D+ T+ +KAC L DL GE + K ++ G D+++G+S++ +Y K G +
Sbjct: 120 GGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIES 179
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A + F +M +DLV W+SMI+G V G ++ ++ M+ GI D ++G++ AC+
Sbjct: 180 AEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSL 239
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G R G +H +R L LDV VQTSLVDMYAK G +D A +F ++ +IV W A+
Sbjct: 240 EGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAM 299
Query: 250 ISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
I G++ N + + + +MQ G PD +++++ L CAQ+ + LGKS+HG+ +R
Sbjct: 300 IGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNG 359
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F +LVL T+++DMY +CG A LF QM R+LISWN +IASY +G +A++LF
Sbjct: 360 FLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQ 419
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+ +KPD +T AS+L A + + E V+K K+ +V + +
Sbjct: 420 DLCNKTLKPDATTIASILPAYAELASLREAEQ-IHGYVTKLKLDSNTFVSNSIVFMYGKC 478
Query: 428 GEVEEALKIVDSMS 441
G + A +I D M+
Sbjct: 479 GNLLRAREIFDRMT 492
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 292/524 (55%), Gaps = 1/524 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF + YNS+I + E L L+ + K + TF + LKAC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
K+G ++ V+ G+ +DV +S+L++Y G++N+A F+++ + +V W+++ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
+G+ REA+D +K+M + G+ D ++ ++ AC +GD G + Y + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V+T+LV++YAK G ++ A VF +M +IVTW +I G+A N +EL ++M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGK-SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSC 330
+PD S+V L +CA +G L LG+ I F NL + ++IDMY+KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+F +M+ +D++ N I+ +GH + + ++F Q + + PD STF LL H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+++G +F+ + Y ++ T +HY CMVDL RAG +++A +++ M P VW
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
ALLSGC K + E V K+++ L P + G + +SN +++ +W+E A VR M K G
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
MKK+PGYS +E+ G++H F+ +DKSH + I L+ L EMR
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 230/480 (47%), Gaps = 59/480 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y G + A KLF+E+P R V T+ ++ Y+ E + L+ +M++ V+PD
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S L ACV + DL GE I + E+ + FV ++++NLY KCGKM +A F+
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD--- 192
M KD+V WS+MI G N P+E ++ + +M +E + D+ ++G + +CA LG
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 193 SRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+G+S+ I RH L ++ + +L+DMYAK G + VFK M +IV A IS
Sbjct: 332 GEWGISL----IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G A+NG + + + + G PD + + L C G ++ G RF FN
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG--------LRF-FN 438
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ SC AL R + + ++ +G G ++A L M
Sbjct: 439 AI---------------SCVYAL-----KRTVEHYGCMVDLWGRAGMLDDAYRLICDM-- 476
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYACMVDLLARAGEV 430
++P+ + +LLS LV++ + ++ ++P +Y + ++ + G
Sbjct: 477 -PMRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRW 532
Query: 431 EEALKIVDSMSTE-----PGLAVWVALLSGCH----NHKKFSIGEKVAKKVLKLNPDDLG 481
+EA ++ D M+ + PG + W+ L H + K + +K+ K+ +DLG
Sbjct: 533 DEAAEVRDMMNKKGMKKIPGYS-WIELEGKVHEFLADDKSHPLSDKIYAKL-----EDLG 586
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 185/373 (49%), Gaps = 5/373 (1%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D F+ + +L + + + + F Q ++ ++S+ING V N E +D + +
Sbjct: 43 HDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSI 102
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+K G+ +++AC + G+ +H ++ N DV TSL+ +Y+ +G L
Sbjct: 103 RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A +F + ++VTW AL SG+ +G ++L +M G +PDS +V L AC
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+G L G+ I Y N + T+++++Y+KCG AR++FD M +D+++W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y + +E + LFLQM++ +KPD + LS+ + G ++ G W ++ +
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE-WGISLIDR 341
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIG 465
++ ++D+ A+ G + ++ M E + + A +SG + H K S
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 466 EKVAKKVLKLNPD 478
+ L ++PD
Sbjct: 401 VFGQTEKLGISPD 413
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 271/473 (57%), Gaps = 2/473 (0%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
S + L++CV ++ G+++ + ++G + + + ++NLY C + A + F++
Sbjct: 2 SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ +++L W+ MI G +NG A+ Y +M+ G+ D+ +++AC+ L G
Sbjct: 62 ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+H IR L DV V +L+DMYAK G ++ A VF + ++V W ++++ ++QN
Sbjct: 122 KKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQN 181
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
G +L L M G +P + V ++ A A G L GK +HGY+ R F+ N +
Sbjct: 182 GQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVK 241
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
T+++DMY+K G + AR+LF+ ++ + ++SWN +I Y +HGH EAL LF +M + V
Sbjct: 242 TALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVL 300
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PDH TF +L+A SH GL+ EG+ F M+S + I PT +HY CM+DLL G +EEA K
Sbjct: 301 PDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYK 360
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQK 495
++ M EP VW ALL C H +GE +K+++L PDD G + ++SN +A K
Sbjct: 361 LIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGK 420
Query: 496 WEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
W+ VA +R M G+KK S +EV ++HAF+ ED SH + E I LK+
Sbjct: 421 WDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKR 473
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 211/399 (52%), Gaps = 11/399 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV-LGLYNQMIKEDVR 73
+++ LY N + +A LF+ + R + +N +I Y+ P+E+ + LY QM +
Sbjct: 41 KLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWN-GPYELAISLYYQMRDYGLV 99
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF LKAC +L ++ G++I + + G +DVFVG++++++Y KCG + A
Sbjct: 100 PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQV 159
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+K+ +D+VCW+SM+ NGQP E++ + M G+ E + I A AD G
Sbjct: 160 FDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLL 219
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HGYS R + KV+T+L+DMYAK+G +++A +F+ + +V+W A+I+G+
Sbjct: 220 PQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGY 279
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
A +G A L+L EM+ PD ++ V L AC+ G L GK +H + DFN+
Sbjct: 280 AMHGHANEALDLFKEMKG-KVLPDHITFVGVLAACSHGGLLNEGK-MH-FRSMISDFNIW 336
Query: 314 LG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
T +ID+ CG A L +M+ D W ++ S IHG+ E L L+
Sbjct: 337 PTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMG-ELALE 395
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+ + D + L + + +G + DLM++K
Sbjct: 396 KLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNK 434
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 292/547 (53%), Gaps = 33/547 (6%)
Query: 29 ARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
A LF + PL +NS++ SR P + Y ++ R D +F LKA
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L G E+ A ++ +D FV + ++++Y CG++N A F++M ++D+V W++
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G EA ++ MK + DE+++ ++ AC G+ R+ +++ + I
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI------------------------ 243
+ +D + T+LV MYA G +D+A F+ MS N+
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 244 -------VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
V W +IS +A++ L + EM G +PD V+++S + AC +G L
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 297 GKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
K +H YT + + L + ++I+MY+KCG AR +F++M +R+++SW+ +I ++ +
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HG ++LSLF QM + V+P+ TF +L SHSGLVEEG+ F M +Y I P +
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVDL RA + EAL++++SM P + +W +L+S C H + +GE AK++LKL
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL 545
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
PD G L+SN +A E +W+ V +R M K + K G S +++NG+ H F++ DK
Sbjct: 546 EPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKR 605
Query: 536 HNQYEDI 542
H Q +I
Sbjct: 606 HKQSNEI 612
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 205/416 (49%), Gaps = 54/416 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR--------------KES---PF 58
++ +Y I AR +F+E+ R V T+N++I Y R K+S P
Sbjct: 155 LMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPD 214
Query: 59 EVL------------------GLYNQMIKEDVRPDSSTFT--VALKACVSLMDLKMGEEI 98
E++ +Y+ +I+ DVR D+ T V + A MD+ M E
Sbjct: 215 EMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAM--EF 272
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
+RK ++FV ++M++ Y K G++++A V F++ + KDLVCW++MI+ + P
Sbjct: 273 FRKMSV----RNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHP 328
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
+EA+ ++ M GI D V M+ +I AC +LG VH Y+ L + + +L
Sbjct: 329 QEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNAL 388
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
++MYAK G LD A VF+ M N+V+W ++I+ FA +G A +L L +M+ EP+
Sbjct: 389 INMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNE 448
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFD 336
V+ V L C+ G ++ GK I ++ + ++D++ + + A + +
Sbjct: 449 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIE 508
Query: 337 QMQ-SRDLISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
M + +++ W ++++ +HG GE A L++ +PDH L+S +
Sbjct: 509 SMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL-----EPDHDGALVLMSNI 559
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 278/518 (53%), Gaps = 25/518 (4%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L +N + + PD F L+A + + + + LG+ D++ ++++N+
Sbjct: 61 LASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNM 120
Query: 121 YVKCG----------------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
Y K K++ F++M +D+V W+++I G NG
Sbjct: 121 YSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMY 180
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
EA++ K M KE + D + ++ + + G +HGY+IR + DV + +SL
Sbjct: 181 EEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSL 240
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+DMYAK ++L+ F +S + ++W ++I+G QNG L M +P
Sbjct: 241 IDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQ 300
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD- 336
VS S + ACA + L LGK +H Y +R FD N + +S++DMY+KCG AR +F+
Sbjct: 301 VSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNK 360
Query: 337 -QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+M RD++SW II +HGH +A+SLF +M+ VKP + F ++L+A SH+GLV+
Sbjct: 361 IEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVD 420
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG +F+ M + + P +HYA + DLL RAG +EEA + +M EP +VW LL+
Sbjct: 421 EGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C HK + EKV K+L ++P ++G H ++SN ++ Q+W + A +R MRK+G+KK P
Sbjct: 481 CRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTP 540
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
S +EV ++H F+ DKSH Y+ I L L +M
Sbjct: 541 ACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQM 578
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 179/344 (52%), Gaps = 9/344 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I S RKLF+ +P+R V ++N++I ++ E L + +M KE++RPDS T + L
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
++ G+EI A+ G+ DVF+GSS++++Y KC ++ ++ AF + +D + W
Sbjct: 209 FTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISW 268
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+S+I G V NG+ + + ++RM KE + +V +I ACA L G +H Y IR
Sbjct: 269 NSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR 328
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTL 263
+ + + +SL+DMYAK G++ +A ++F M ++V+W A+I G A +G A +
Sbjct: 329 LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAV 388
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG----TSVI 319
L EM G +P V+ ++ L AC+ G + G R DF + G +V
Sbjct: 389 SLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQR--DFGVAPGLEHYAAVA 446
Query: 320 DMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEA 362
D+ + G A M S W+ ++A+ H + E A
Sbjct: 447 DLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELA 490
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 25/339 (7%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W +I +G R ++ ++ ++ GI D + L++A S+H I
Sbjct: 44 WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVI 103
Query: 205 RRHLNLDVKVQTSLVDMYAK----------------------TGHLDLASHVFKNMSRIN 242
R + D+ +L++MY+K + +D +F M +
Sbjct: 104 RLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRD 163
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W +I+G AQNG+ L ++ EM PDS +L S L + + GK IHG
Sbjct: 164 VVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHG 223
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
Y +R FD ++ +G+S+IDMY+KC + F + +RD ISWN IIA +G ++
Sbjct: 224 YAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQ 283
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
L F +M++ VKP +F+S++ A +H + G+ ++ + + + ++
Sbjct: 284 GLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYII-RLGFDDNKFIASSLL 342
Query: 422 DLLARAGEVEEALKIVDSMS-TEPGLAVWVALLSGCHNH 459
D+ A+ G ++ A I + + + + W A++ GC H
Sbjct: 343 DMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + F L R ++NSII + + LG + +M+KE V+P
Sbjct: 240 LIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPM 299
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+F+ + AC L L +G+++ + LG+ ++ F+ SS+L++Y KCG + A F
Sbjct: 300 QVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFN 359
Query: 136 KMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
K++ +D+V W+++I G +G +AV ++ M +G+ V M ++ AC S
Sbjct: 360 KIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTAC-----S 414
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSL------VDMYAKTGHLDLASHVFKNM 238
GL G+ + D V L D+ + G L+ A NM
Sbjct: 415 HAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM 465
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 298/528 (56%), Gaps = 1/528 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y ++ ARKLF +P T+N +I Y + E L+N MI V+PD
Sbjct: 287 LVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L + + L+ +E+ V DV++ S+++++Y K G + A F+
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQ 406
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D+ ++MI+G V +G +A++ ++ + +EG+ + + M ++ ACA L +
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKL 466
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +++ L V V +++ DMYAK G LDLA F+ MS + + W ++IS F+Q
Sbjct: 467 GKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQ 526
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG ++L +M G + DSVSL SAL + A + L GK +HGY +R F + +
Sbjct: 527 NGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFV 586
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++IDMYSKCG + AR +F+ M ++ +SWN IIA+YG HG E L LF +M+ V
Sbjct: 587 ASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGV 646
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH TF ++SA H+GLV EG ++F M +Y I +HYACMVDL RAG + EA
Sbjct: 647 HPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAF 706
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ SM P VW LL C H + + ++ +L+L+P + G + L+SN A
Sbjct: 707 DAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAG 766
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+W V VR+ M++ G++K+PGYS ++VNG H F + +H + +I
Sbjct: 767 EWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEI 814
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 217/442 (49%), Gaps = 5/442 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIA-YSRKESPFEVLGLYNQMIKEDVR 73
R++ LY I LF L L +N +I Y F +L Y +M+ +V
Sbjct: 84 RVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALL-FYFKMLGSNVS 142
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD TF +KAC L ++ + + A LG+ D+FVGS+++ LY G + +A
Sbjct: 143 PDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRV 202
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ ++D + W+ M++G V +G A+ + M+ + V ++ CA G
Sbjct: 203 FDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKF 262
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VHG I D +V +LV MY+K G+L A +F M + + VTW LI+G+
Sbjct: 263 CLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGY 322
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG L M S G +PDSV+ S L + + G L+ K +H Y VR R F++
Sbjct: 323 VQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 382
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L +++ID+Y K G AR +F Q D+ +I+ Y +HG +A++ F +I+
Sbjct: 383 YLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 442
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P+ T AS+L A + ++ G+ + K +++ + + D+ A+ G ++
Sbjct: 443 GMVPNSLTMASVLPACAALAALKLGKE-LHCDILKKQLENIVNVGSAITDMYAKCGRLDL 501
Query: 433 ALKIVDSMSTEPGLAVWVALLS 454
A + MS E W +++S
Sbjct: 502 AYEFFRRMS-ETDSICWNSMIS 522
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 184/363 (50%), Gaps = 1/363 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I AR++F+ELP R +N ++ Y + +G + M +
Sbjct: 186 LIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVN 245
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T+T L C + +G ++ + G+ D V ++++ +Y KCG + +A F
Sbjct: 246 SVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFN 305
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + D V W+ +I G V NG EA + M G+ D V + + + G R
Sbjct: 306 TMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRH 365
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
VH Y +R + DV ++++L+D+Y K G +++A +F+ + +++ A+ISG+
Sbjct: 366 CKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVL 425
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-L 314
+GL + + G P+S+++ S L ACA + LKLGK +H +++ N+V +
Sbjct: 426 HGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNV 485
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+++ DMY+KCG A F +M D I WN +I+S+ +G E A+ LF QM +
Sbjct: 486 GSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGA 545
Query: 375 KPD 377
K D
Sbjct: 546 KFD 548
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 186/374 (49%), Gaps = 3/374 (0%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+AC ++ ++ + + G + + S +L LYV CG++++ F ++ +
Sbjct: 51 FRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNA 110
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+ MI GL G A+ Y +M + D+ +I+AC L + + VH
Sbjct: 111 LPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNT 170
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ ++D+ V ++L+ +YA G++ A VF + + + + W ++ G+ ++G +
Sbjct: 171 ARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNA 230
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDM 321
+ M++ +SV+ L CA G LG +HG + F+F+ + +++ M
Sbjct: 231 MGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAM 290
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSKCG AR LF+ M D ++WN +IA Y +G +EA LF MI VKPD TF
Sbjct: 291 YSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 350
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
AS L ++ SG + + +V ++++ + ++D+ + G+VE A KI +
Sbjct: 351 ASFLPSILESGSLRHCKEVHSYIV-RHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQ-N 408
Query: 442 TEPGLAVWVALLSG 455
T +AV A++SG
Sbjct: 409 TLVDVAVCTAMISG 422
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 6/261 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L N I +Y + A + F + +NS+I ++S+ P
Sbjct: 474 ILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMA 533
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ QM + DS + + AL + +L L G+E+ + + +D FV S+++++
Sbjct: 534 VDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDM 593
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCGK+ A F M K+ V W+S+I +G RE +D + M + G+ D V
Sbjct: 594 YSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTF 653
Query: 181 MGLIQACADLGDSRFGLSVHGY-SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKN 237
+ +I AC G G +H + + R + +++ +VD+Y + G L A K+
Sbjct: 654 LVIISACGHAG--LVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKS 711
Query: 238 MSRI-NIVTWGALISGFAQNG 257
M + WG L+ +G
Sbjct: 712 MPFTPDAGVWGTLLGACRLHG 732
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 288/527 (54%), Gaps = 5/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARK+F+ +P +N+++ S E+ V + VRPD++T L A
Sbjct: 168 ARKVFDTVPSPDTVLWNTLLAGLSGSEA---VESFARMVCDGSVRPDATTLASVLPAAAE 224
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ D+ MG + A + G V + +++LY KCG + A F+ M++ DLV ++++
Sbjct: 225 VADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNAL 284
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G NG +V+ + + G+ + ++ LI + G +HG+ ++
Sbjct: 285 ISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGF 344
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ V T++ ++ + ++ A F M + +W A+ISG+AQNGL + L +
Sbjct: 345 TANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQ 404
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLVLGTSVIDMYSKCGV 327
M P+ +++ S L ACAQ+G L LGK +H T + N+ + T++IDMY+KCG
Sbjct: 405 MVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGS 464
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S AR +F+ M +++++SWN +IA YG+HG G EAL L+ M++ + P +TF S+L A
Sbjct: 465 ISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYA 524
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP-GL 446
SH GLVEEG F M Y I P +H CMVDLL RAG+++EA +++ G
Sbjct: 525 CSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGP 584
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VW ALL C HK + + ++K+ +L+P++ G + L+SN ++++ E A VR+
Sbjct: 585 GVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEA 644
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ + K PGY+++E+ + H F+ D++H Q E I L+KL +M
Sbjct: 645 KSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKM 691
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 203/381 (53%), Gaps = 15/381 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D FV S++ LY +++ A F+ + D V W++++ GL +G EAV+++ RM
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL--SGS--EAVESFARMV 203
Query: 170 KEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+G + D + ++ A A++ D G VH ++ + L V T L+ +Y+K G +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A +F M + ++V + ALISG++ NG+ GS++ L E+ + G P+S +LV+ +
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ G L + +HG+ ++ F N + T++ ++ + AR FD M + + SWN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I+ Y +G E A++LF QM++ V+P+ T +S LSA + G + G+ W ++++
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGK-WLHRIITE 442
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
++P ++D+ A+ G + EA +I ++M + + W A+++G H +
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQ------ 495
Query: 468 VAKKVLKLNPDDLGIHALVSN 488
+ LKL D L H L ++
Sbjct: 496 -GAEALKLYKDMLDAHLLPTS 515
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 6/393 (1%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
K L+ + + + +I+LY D+ SAR LF+ + + YN++I YS +
Sbjct: 240 KCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVN 299
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +++ + P+SST + + + + ++ G+ + V +++ L+
Sbjct: 300 LFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHC 359
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ M A AF+ M K + W++MI+G NG AV +++M K + + + +
Sbjct: 360 RLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISS 419
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+ ACA LG G +H L +V V T+L+DMYAK G + A +F M N
Sbjct: 420 TLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKN 479
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W A+I+G+ +G L+L +M P S + +S L AC+ G ++ G +
Sbjct: 480 VVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFR 539
Query: 303 YTVRRFDFNLVL--GTSVIDMYSKCGVPSCARALFDQMQSRDLIS--WNVIIASYGIHGH 358
+ N + T ++D+ + G A L + + W ++ + +H
Sbjct: 540 SMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKD 599
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
+ A ++ E + P++S + LLS L S
Sbjct: 600 SDLAKLASQKLFE--LDPENSGYYVLLSNLHTS 630
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 13/258 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ +A I L+ ND+ SARK F+ +P + ++++N++I Y++
Sbjct: 339 VLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMA 398
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ QM+K +VRP+ T + L AC L L +G+ + R E +V+V ++++++
Sbjct: 399 VALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDM 458
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++EA F M K++V W++MI G +GQ EA+ YK M +
Sbjct: 459 YAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATF 518
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHV 234
+ ++ AC S GL G+ + R + D + T +VD+ + G L A +
Sbjct: 519 LSVLYAC-----SHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFEL 573
Query: 235 FKNM--SRINIVTWGALI 250
S + WGAL+
Sbjct: 574 ISEFPKSAVGPGVWGALL 591
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 304/550 (55%), Gaps = 1/550 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK + S ++ +Y +A +F E+P + ++N++I E
Sbjct: 214 LIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLA 273
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L +M V P T + ALKAC ++ +K+G ++ +++ D FVG ++++
Sbjct: 274 LKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDM 333
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A + F+ M KD++ W+S+I+G G EA+ + M KEG++ ++ +
Sbjct: 334 YSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTL 393
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++++ A + F VH SI+ D V SL+D Y K L+ A+ VF+
Sbjct: 394 STILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPA 453
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V + ++I+ ++Q GL L++ + MQ +PD+ S ACA + + GK I
Sbjct: 454 EDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQI 513
Query: 301 HGYTVRRFDFNLVL-GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + ++ + V G S+++MY+KCG A +F+++ R ++SW+ +I HGHG
Sbjct: 514 HVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHG 573
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+AL LF QM++ + P+H T S+LSA +H+GLV E R +F LM + I PT++HYAC
Sbjct: 574 RKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYAC 633
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVD+L R G ++EA+ +V M + AVW ALL HK +G A+ +L L P+
Sbjct: 634 MVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEK 693
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G H L++N +A W+ VA VR++M+ S +KK PG S +E+ +++ FI+ D+SH +
Sbjct: 694 SGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRS 753
Query: 540 EDIVYVLKKL 549
++I L L
Sbjct: 754 KEIYVKLDDL 763
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 201/402 (50%), Gaps = 7/402 (1%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L +MI + P+ + + L AC L D G ++ ++LGY +D F +++L++
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G A+ F ++ + D+V W+++I G V + + A+ +M + +
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ACA +G + G +H ++ + D V L+DMY+K G L A VF M
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W ++ISG++ G + L M G E + +L + L + A + +
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H +++ + ++ + S++D Y KC + A +F+ + DL+++ +I +Y +G G
Sbjct: 413 HTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLG 472
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA- 418
EEAL ++L+M + +KPD F+SL +A ++ E+G+ + V K +A
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGK---QIHVHVLKCGLLSDVFAG 529
Query: 419 -CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+V++ A+ G +++A I + +S G+ W A++ G H
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQH 570
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 204/448 (45%), Gaps = 82/448 (18%)
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY------------ 165
+NLY KC A DLV WS++I+G V NG+ EA+ Y
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 166 ----------------------------KRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
M GI +E + ++ ACA L D +G+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
VHGY I+ + D +L+DMYAK+G + A VF + + +IV+W A+I+G +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGT 316
L+LL +M S P +L SAL ACA IG +KLG+ +H ++ + + +G
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+IDMYSKCG+ AR +FD M +D+I WN II+ Y G+ EA+SLF M + ++
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 377 DHSTFASLLSALSHS---GLVEE-------GRYWFDLMVSK------------------Y 408
+ +T +++L + + S G E+ Y +D V+ +
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 409 KIQPTEK--HYACMVDLLARAGEVEEALKIVDSMS---TEPGLAVWVALLSGCHNHKKFS 463
++ P E Y M+ ++ G EEALK+ M +P ++ +L + C N +
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFA 491
G+++ VLK L+S+ FA
Sbjct: 509 QGKQIHVHVLKC--------GLLSDVFA 528
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 65/254 (25%)
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+++YSKC AR L DL+SW+ +I+ Y +G GEEAL + +M K +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 379 STFASLLSALSHSGLVEEGRYWFDL-----MVSKYKIQPTEKHY-----AC--------- 419
TF+S+L S + +E G+ + M+S I P E AC
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMIST-GISPNEFSLSTVLNACAGLEDENYG 207
Query: 420 ---------------------MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
++D+ A++G E A+ + + +P + W A+++GC
Sbjct: 208 MKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVL 266
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
H+K + K+ K +G + + + F + S +K
Sbjct: 267 HEKNDLALKLLGK--------MGSYRVAPSMFTLS---------------SALKACAAIG 303
Query: 519 VVEVNGELHAFIME 532
+V++ +LH+ +M+
Sbjct: 304 LVKLGRQLHSALMK 317
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 305/556 (54%), Gaps = 3/556 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT S + ++ +Y + AR LF+E+P R ++ ++I Y+ +E E
Sbjct: 143 VKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAF 202
Query: 62 GLYNQMIKEDVRPDSS--TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L+ M E+ + + FT L A M + G ++ A++ G V V ++++
Sbjct: 203 ELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVT 262
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+YVKCG + +A+ FE K+ + WS+M+ G G +A+ + M + G E
Sbjct: 263 MYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFT 322
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++G+I AC+D G +HGYS++ L + V ++LVDMYAK G + A F+ +
Sbjct: 323 LVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQ 382
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ ++V W ++I+G+ QNG L L +MQ G P+ +++ S L AC+ + L GK
Sbjct: 383 QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQ 442
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H ++ F + +G+++ MY+KCG +F +M +RD+ISWN +I+ +G
Sbjct: 443 MHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGR 502
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G E L LF +M KPD+ TF +LLSA SH GLV+ G +F +M ++ I PT +HYA
Sbjct: 503 GNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYA 562
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVD+L+RAG++ EA + ++S + + GL +W LL+ NH+ + +G +K+++L
Sbjct: 563 CMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSL 622
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ + L+S+ + KWE+V VR M+ G+ K PG S +E+ H F++ D H Q
Sbjct: 623 ESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQ 682
Query: 539 YEDIVYVLKKLYLEMR 554
++I LK L M+
Sbjct: 683 IDEIRLGLKLLTKLMK 698
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 247/482 (51%), Gaps = 12/482 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES---PFEVLGLYNQMI--KE 70
+I LY + A +F+ + + V ++N +I A+S++++ V+ L+ Q++ +
Sbjct: 51 LINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHK 110
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ P++ T T A +L D + G + AV+ +DVF SS+LN+Y K G + EA
Sbjct: 111 TIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEA 170
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACA 188
F++M ++ V W++MI+G EA + +K M+ E G + +E V ++ A
Sbjct: 171 RDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALT 230
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
G VH +++ L V V +LV MY K G L+ A F+ N +TW A
Sbjct: 231 CYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSA 290
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+++GFAQ G + L+L +M G P +LV + AC+ + G+ +HGY+++
Sbjct: 291 MVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLG 350
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
++ L + ++++DMY+KCG AR F+ +Q D++ W II Y +G E AL+L+
Sbjct: 351 YELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYG 410
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M V P+ T AS+L A S+ +++G+ ++ KY + + + A+
Sbjct: 411 KMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGII-KYNFSLEIPIGSALSAMYAKC 469
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHAL 485
G +++ +I M ++ W A++SG + + + G ++ +K+ PD++ L
Sbjct: 470 GSLDDGYRIFWRMPARDVIS-WNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNL 528
Query: 486 VS 487
+S
Sbjct: 529 LS 530
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 210/440 (47%), Gaps = 23/440 (5%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
AL C L+ G + + + G + + +S++NLY KC ++A + F+ + KD
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKR-------MKKEGIDADEVVMMGLIQACADLGDSR 194
+V W+ +IN F+ Q A + M + I + + G+ A + L DSR
Sbjct: 76 VVSWNCLINA--FSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSR 133
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G H +++ + DV +SL++MY KTG + A +F M N V+W +ISG+A
Sbjct: 134 AGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYA 193
Query: 255 QNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
LA EL LM + G + S L A + G+ +H ++ +
Sbjct: 194 SQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCI 253
Query: 313 V-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V + +++ MY KCG A F+ +++ I+W+ ++ + G ++AL LF M +
Sbjct: 254 VSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQ 313
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGR--YWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ P T +++A S + + EGR + + L + Y++Q + +VD+ A+ G
Sbjct: 314 SGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLG-YELQLYV--LSALVDMYAKCGS 370
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALV- 486
+ +A K + + +P + +W ++++G + + + K+ + P+DL + +++
Sbjct: 371 IVDARKGFECIQ-QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLK 429
Query: 487 --SNFFAMEQKWEEVAGVRK 504
SN A++Q + AG+ K
Sbjct: 430 ACSNLAALDQGKQMHAGIIK 449
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK N S + A+Y + ++F +P R V ++N++I S+ E
Sbjct: 447 IIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEG 506
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLN 119
L L+ +M E +PD+ TF L AC + + G ++ E V + M++
Sbjct: 507 LELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVD 566
Query: 120 LYVKCGKMNEA 130
+ + GK++EA
Sbjct: 567 ILSRAGKLHEA 577
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 299/544 (54%), Gaps = 9/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + LFE + + + ++ SII ++++ E L ++ +MI E P
Sbjct: 176 LVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHP 235
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F A +AC ++ + GE+I +++ D++VG S+ ++Y +C ++ A VAF
Sbjct: 236 NEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAF 295
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+S++N G EA+ + M+ G+ D + + GL+ AC
Sbjct: 296 YRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 355
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y ++ L+ DV V SL+ MYA+ L A VF + ++VTW ++++ A
Sbjct: 356 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 415
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV- 313
Q+ L+L + D +SL + L A A++G+ ++ K +H Y F LV
Sbjct: 416 QHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYA---FKAGLVD 472
Query: 314 ---LGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L ++ID Y+KCG A LF+ M +RD+ SW+ +I Y G+ +EA LF +M
Sbjct: 473 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRM 532
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++P+H TF +L+A S G V EG Y++ +M +Y I PT +H +C+VDLLARAG+
Sbjct: 533 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 592
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ EA +D M EP + +W LL+ H +G++ A+ +L ++P + L+ N
Sbjct: 593 LTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNI 652
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A W E A ++K MR SG+KK PG S V++ GEL FI+ED+SH + E+I +L+ +
Sbjct: 653 YAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELI 712
Query: 550 YLEM 553
+EM
Sbjct: 713 GMEM 716
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 218/424 (51%), Gaps = 13/424 (3%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R ++ S+I A+ + + LGL++ M++ D A++AC L D+ G ++
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
A++ G+D+ V ++++ +Y K G +++ + FE+++ KDL+ W S+I G G
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 217
Query: 159 REAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA+ ++ M EG +E +AC +G +G +HG SI+ L+ D+ V S
Sbjct: 218 MEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCS 277
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L DMYA+ +LD A F + ++V+W ++++ ++ GL L L EM+ G PD
Sbjct: 278 LSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPD 337
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
+++ L AC L G+ IH Y V+ D ++ + S++ MY++C S A +F
Sbjct: 338 GITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFH 397
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ +D+++WN I+ + H H EE L LF + ++ D + ++LSA + G E
Sbjct: 398 EIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEM 457
Query: 397 GR----YWFDL-MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
+ Y F +V + T ++D A+ G +++A+++ + M + W +
Sbjct: 458 VKQVHAYAFKAGLVDDRMLSNT------LIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSS 511
Query: 452 LLSG 455
L+ G
Sbjct: 512 LIVG 515
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 175/329 (53%), Gaps = 6/329 (1%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M ++ V W+S+I V NG+ +A+ + M + G AD+ + ++AC +LGD G
Sbjct: 95 MYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTG 154
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
VH ++++ D+ VQ +LV MY+K G +D +F+ + ++++WG++I+GFAQ
Sbjct: 155 RQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQ 214
Query: 257 GLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G L++ EM G P+ SA AC +G + G+ IHG +++ R D +L +
Sbjct: 215 GFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYV 274
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G S+ DMY++C AR F ++++ DL+SWN I+ +Y + G EAL LF +M ++ +
Sbjct: 275 GCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGL 334
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD T LL A + GR +V K + ++ + AR ++ A+
Sbjct: 335 RPDGITVRGLLCACVGRDALYHGRLIHSYLV-KLGLDGDVSVCNSLLSMYARCSDLSSAM 393
Query: 435 KIVDSMSTEPGLAVWVALLSGC--HNHKK 461
+ + + + W ++L+ C HNH +
Sbjct: 394 DVFHEIKDQD-VVTWNSILTACAQHNHPE 421
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 131/257 (50%), Gaps = 7/257 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + ++++Y +D+ SA +F E+ + V T+NSI+ A ++ P EV
Sbjct: 364 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 423
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L++ + K + D + L A L +M +++ A + G +D + +++++
Sbjct: 424 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 483
Query: 121 YVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG +++AM FE M +D+ WSS+I G G +EA D + RM+ GI + V
Sbjct: 484 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 543
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ---TSLVDMYAKTGHLDLASHVFK 236
+G++ AC+ +G G + YSI V + + +VD+ A+ G L A++
Sbjct: 544 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 601
Query: 237 NMS-RINIVTWGALISG 252
M +I+ W L++
Sbjct: 602 QMPFEPDIIMWKTLLAA 618
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 271/477 (56%), Gaps = 2/477 (0%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P S + L++C++ +K G+++ + G+G D + + ++NLY C ++ A +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ + ++ W+ +I G +NG AV Y +M G+ D +++ACA L
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + ++ DV V +L+DMYAK G + A VF + + V W ++++ +
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+QNG + L L EM G P +LV+A+ A A L G+ +HG + R+ F+ +
Sbjct: 253 SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD 312
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T+++DMY+KCG AR LF+++ + ++SWN +I Y +HGH EAL LF +M
Sbjct: 313 KVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NR 371
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ KPDH TF +LSA SH GL+EEG +F+ M+ YKI PT +HY CMVDLL +G ++E
Sbjct: 372 VAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDE 431
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++ M P VW ALL+ C H +GE +++++L PDD G + ++SN +A
Sbjct: 432 AYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQ 491
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KWE VA +RK M +KK S +EV ++HAF+ D SH ++I L+++
Sbjct: 492 AGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERV 548
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 186/362 (51%), Gaps = 9/362 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV-LGLYNQMIKEDVR 73
+++ LY + + SAR LF+ +P + +N +I Y+ P+E + LY QM +
Sbjct: 115 KLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWN-GPYEAAVQLYYQMFDYGLV 173
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ TF LKAC +L ++ G EI V+ G+ DVFVG++++++Y KCG + A
Sbjct: 174 PDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREV 233
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+K+ +D V W+SM+ NG P + M G+ E ++ I A AD
Sbjct: 234 FDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAAL 293
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG S R+ KV+T+LVDMYAK G + +A ++F+ + +V+W A+I+G+
Sbjct: 294 PQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGY 353
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
A +G A L+L EM +PD ++ V L AC+ G L+ G +R + +
Sbjct: 354 AMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPT 412
Query: 314 LG--TSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGH---GEEALSLFL 367
+ T ++D+ G A L QM+ D W ++ S IH + GE AL +
Sbjct: 413 VQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLI 472
Query: 368 QM 369
++
Sbjct: 473 EL 474
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 294/551 (53%), Gaps = 11/551 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL------YNQM 67
+I+++Y + A+KLFEELP+R V ++N +I A + E G+ + +M
Sbjct: 99 NQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRM 158
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ E + PD TF + C D++MG ++ V++G+ D FVG +++ LY KCG +
Sbjct: 159 LLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFV 218
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A F + +DLV W+ M++ VFN P EA + M+ + ++ DE L+
Sbjct: 219 ENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVI 278
Query: 188 AD--LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
+D L FG VH +R+ + DV V ++L++MYAK+ ++ A VF MS N+V
Sbjct: 279 SDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVA 338
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +I GF +G ++L+ EM GF PD +++ S + +C + +H + V
Sbjct: 339 WNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAV 398
Query: 306 RRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
+ DF L + S+I YSKCG + A F+ DL++W +I +Y HG E++
Sbjct: 399 KLSCQDF-LSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKST 457
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+F +M+ +KPD F +LSA +H GLV +G ++F LM + Y+I P +HY C+VDL
Sbjct: 458 EMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDL 517
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
L R G + EA +I+ SM E A + C H + + A+K+ + P+ +
Sbjct: 518 LGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNY 577
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
A++SN FA ++ W +V +RKTM KVPG S +E+ ++H+F+ DKSH ++
Sbjct: 578 AVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMY 637
Query: 544 YVLKKLYLEMR 554
L L M+
Sbjct: 638 VTLNMLLRPMK 648
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 203/411 (49%), Gaps = 21/411 (5%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L G+++ ++ G+ + + + +L++Y+KC + +A FE++ +++V W+ MI
Sbjct: 76 LPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRA 135
Query: 152 LVFNGQPREA------VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
V E+ ++RM E + D + GLI C D G+ +H ++++
Sbjct: 136 SVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVK 195
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+LD V +LV +YAK G ++ A VF ++S ++V W ++S + N L +
Sbjct: 196 VGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRV 255
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQ--IGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
M+ D + S L + + + GK +H +R+ FD ++++ +++I+MY
Sbjct: 256 FNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMY 315
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+K AR +FD+M R++++WN +I +G HG G E + L +M+ PD T +
Sbjct: 316 AKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTIS 375
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL----ARAGEVEEALKIVD 438
S++S+ ++ + E L V + ++ + + + + + L ++ G + A K +
Sbjct: 376 SIISSCGYASAITE-----TLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFE 430
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
++++P L W +L+ H ++ +K+L + PD + ++S
Sbjct: 431 -LTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLS 480
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 31/199 (15%)
Query: 275 EPDSVSLV--SALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSC 330
+P++V L +AL A+ G+L GK +H + + +F F VL ++ +Y KC
Sbjct: 55 DPNTVHLFCSNALKISAKKGYLPEGKQLHAHLI-KFGFCQVLSLQNQILSVYLKCQEAED 113
Query: 331 ARALFDQMQSRDLISWNVII-ASYGIHGHGEEA-----LSLFLQMIETMVKPDHSTFASL 384
A+ LF+++ R+++SWN++I AS G + E + S F +M+ M+ PDH TF L
Sbjct: 114 AKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGL 173
Query: 385 LSALSHSGLVEEG--------RYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEVEEALK 435
+ + +E G + FDL + C +V L A+ G VE A +
Sbjct: 174 ICLCTQFNDIEMGVQLHCFTVKVGFDL----------DCFVGCALVGLYAKCGFVENARR 223
Query: 436 IVDSMSTEPGLAVWVALLS 454
+ +S L +W ++S
Sbjct: 224 VFCDVSCR-DLVMWNVMVS 241
>gi|296083841|emb|CBI24229.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 296/539 (54%), Gaps = 63/539 (11%)
Query: 16 IIALYGGKNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRK------ESPFEVLGLYNQM 67
+I LY + SA+ +F+ E PL + +N ++ A ++ P + L L+ +M
Sbjct: 44 LINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEPEKALELFEEM 102
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+PDS T T + +C L+DL+ G+EI + V G+ D FV S+++++Y KCG +
Sbjct: 103 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 162
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE++QRK++V W+SMI G G + ++ ++RM +EGI + ++ AC
Sbjct: 163 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 222
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ + + G +HGY IR + D+ V +SL+D+Y K G++ A +VF+NM + N+V+W
Sbjct: 223 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWN 282
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
+ISG+ + G L + +M+ G +PD+++ S L AC+Q+ L+ GK IH + +
Sbjct: 283 VMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIES 342
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + N V LF++MQ D
Sbjct: 343 KLEINEV--------------------LFEKMQQSD------------------------ 358
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
KPD TF ++LSA SH+GLV+EG Y+F+ M+++Y +P +HY+C++DLL R
Sbjct: 359 -------AKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGR 411
Query: 427 AGEVEEALKIVD-SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
G + EA +I+ + + + L S CH HKK +GE++ + +++ +PDD + +
Sbjct: 412 VGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYII 471
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
+SN +A +KW+EV VR +++ G+KK PG S +EV +H F++EDKSH Q D++Y
Sbjct: 472 LSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQ-ADMIY 529
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 112/211 (53%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++++ + G ++ +YG + A+++FE++ + V ++NS+I YS K
Sbjct: 137 LVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSC 196
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+ +M +E +RP +T + L AC ++L++G+ I + D+FV SS+++L
Sbjct: 197 IELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDL 256
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F+ M + ++V W+ MI+G V G EA+ + M+K G+ D +
Sbjct: 257 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 316
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
++ AC+ L G +H + I L ++
Sbjct: 317 TSVLPACSQLAVLEKGKEIHNFIIESKLEIN 347
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 291/530 (54%), Gaps = 10/530 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+++P + +NS+ Y++ ES EV+ L+ QM D+RP+ TF V LK+C
Sbjct: 152 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 211
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L GE++ ++ G+ + FVG++++++Y G + +A F +M +++V W+SM
Sbjct: 212 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 271
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
ING + + A + + + +++ G I+ D+ ++R
Sbjct: 272 INGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEG-GDMVEAR-------KLFXEMP 323
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
N DV +++ YA G+++ +F+ M NI +W ALI G+A NGL L
Sbjct: 324 NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKR 383
Query: 269 MQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M S P+ +LV+ L ACA++G L LGK +H Y N+ +G +++DMY+KCG
Sbjct: 384 MLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCG 443
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+ A ++F M ++DLISWN +I +H G +AL+LF QM KPD TF +L
Sbjct: 444 IIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILC 503
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A +H GLVE+G +F M Y I P +HY CMVD+LARAG +E+A V M E
Sbjct: 504 ACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADG 563
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W LL C +K + E +++++L P + + ++SN + +WE+VA ++ M
Sbjct: 564 VIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAM 623
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
R +G KK+PG S++EVN + F D+ H Q E+I VL+ L +R+
Sbjct: 624 RDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSF 673
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 133/258 (51%), Gaps = 6/258 (2%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y ++ + LFEE+P R + ++N++I Y+ FEVLG + +M+ E DV P+ +T
Sbjct: 337 YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDAT 396
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L AC L L +G+ + A G +V+VG++++++Y KCG + A+ F M
Sbjct: 397 LVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMD 456
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
KDL+ W+++I GL + + +A++ + +MK G D + +G++ AC +G G +
Sbjct: 457 TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFA 516
Query: 199 VHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG---F 253
+L + ++ +VDM A+ G L+ A + M + V W L+ +
Sbjct: 517 YFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIY 576
Query: 254 AQNGLAGSTLELLMEMQS 271
LA L+ L+E++
Sbjct: 577 KNVELAELALQRLIELEP 594
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 169/372 (45%), Gaps = 14/372 (3%)
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
K +I + + G+ + ++ ++ + +M A F+++ ++ W+SM G
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 174
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
+ RE V + +MK I + ++++C + G VH + I+ +
Sbjct: 175 AQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNP 234
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
V T+L+DMY+ G + A +F M N+V W ++I+G+ + +L+ +
Sbjct: 235 FVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA------DLVSARRLF 288
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYSKCGVPSC 330
P+ ++ ++ G+++ G + + + +++ +V+ Y+ G
Sbjct: 289 DLAPERDVVLWNIMVS---GYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEA 345
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFASLLSALS 389
LF++M R++ SWN +I Y +G E L F +M+ E+ V P+ +T ++LSA +
Sbjct: 346 LEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACA 405
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
G ++ G+ W + ++ ++D+ A+ G +E A+ + M T+ L W
Sbjct: 406 RLGALDLGK-WVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTK-DLISW 463
Query: 450 VALLSGCHNHKK 461
L+ G H +
Sbjct: 464 NTLIGGLAMHSR 475
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 298/544 (54%), Gaps = 2/544 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++A Y + A ++F+ +P+R + T+N ++ Y
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLA 192
Query: 61 LGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L + +M +V+ DS AL AC G+EI + G D+ VG+S+L+
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLD 252
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG++ A F M + +V W+ MI G N +P EA D + +M+ EG+ + V
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ L+ ACA S +G SVHGY +RR V ++T+L++MY K G ++ + +F ++
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+V+W +I+ + + + L +E+ + PD ++ + + A +G L+ +
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH Y + + N ++ +V+ MY++ G +R +FD+M S+D+ISWN +I Y IHG
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+ AL +F +M ++P+ STF S+L+A S SGLV+EG F+LM+ +Y + P +HY
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYG 552
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CM DLL R G++ E L+ ++SM +P VW +LL+ N I E A+++ +L D
Sbjct: 553 CMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHD 612
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + ++S+ +A +WE+V VR M++ G+++ S+VE++ +F D SH+Q
Sbjct: 613 NTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQ 672
Query: 539 YEDI 542
I
Sbjct: 673 SRTI 676
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 228/461 (49%), Gaps = 47/461 (10%)
Query: 38 LRGVDTY--NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
+RG D + N +I ++ P L Y M+++ RPD TF V +K C L L G
Sbjct: 67 VRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEG 126
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++LG +DV+ +S++ Y K G + +A F+ M +D+V W+ M++G V N
Sbjct: 127 RAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSN 186
Query: 156 GQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
G A+ ++ M + D V ++ + AC S G +HGY IR L D+KV
Sbjct: 187 GLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKV 246
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
TSL+DMY K G + A VF M +VTW +I G+A N + M+M++ G
Sbjct: 247 GTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGL 306
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
+ + V+ ++ L ACAQ G+S+HGY VRR F ++VL T++++MY K G +
Sbjct: 307 QVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEK 366
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS------LLSA 387
+F ++ ++ L+SWN +IA+Y EA++LFL+++ + PD+ T ++ LL +
Sbjct: 367 IFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGS 426
Query: 388 LSH-----------------------------SGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
L H SG V R FD MVSK I +
Sbjct: 427 LRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS-----WN 481
Query: 419 CMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGC 456
M+ A G+ + AL++ D M +P + +V++L+ C
Sbjct: 482 TMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 169/333 (50%), Gaps = 4/333 (1%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G+M+EA+ A ++ D + MI G G P A+ AY+ M ++G D ++
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+ CA LG G + HG I+ L DV SLV YAK G ++ A VF M +IV
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
TW ++ G+ NGL L EM + + DSV +++AL AC GK IHGY
Sbjct: 175 TWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGY 234
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+R + ++ +GTS++DMY KCG + AR++F M R +++WN +I Y ++ +EA
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEA 294
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
F+QM ++ + T +LL+A + + GR +V + + P +++
Sbjct: 295 FDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR-QFLPHVVLETALLE 353
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + G+VE + KI ++ + L W +++
Sbjct: 354 MYGKVGKVESSEKIFGKIANKT-LVSWNNMIAA 385
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
SLV A G +D A + + +I GFA GL L M G P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
D + + CA++G L G++ HG ++ + ++ S++ Y+K G+ A +F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLV 394
D M RD+++WN+++ Y +G G AL+ F +M + + V+ D + L+A
Sbjct: 166 DGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSS 225
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+G+ ++ ++ ++ K ++D+ + GEV A + +M + W ++
Sbjct: 226 MQGKEIHGYVI-RHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT-VVTWNCMIG 283
Query: 455 G 455
G
Sbjct: 284 G 284
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 283/507 (55%), Gaps = 2/507 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+++Y ++ A++ F L R + +++ + A + P E L ++ +M E ++PD
Sbjct: 369 IVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPD 428
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + + AC + ++G+ + ++ G+D+ V ++++++Y +C AM F
Sbjct: 429 KTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFN 488
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KD+V W+++ING G PR A++ + R++ G+ D M+ L+ ACA L D
Sbjct: 489 RMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYL 548
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK-NMSRINIVTWGALISGFA 254
G+ HG I+ + ++ V+ +L+DMYAK G L A ++F N + V+W +I+G+
Sbjct: 549 GICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYL 608
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
NG A + +M+ P+ V+ V+ L A + + L+ + H +R F + +
Sbjct: 609 HNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTL 668
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G S+IDMY+K G S + F +M+++ ISWN +++ Y +HG GE AL+LF M ET
Sbjct: 669 IGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETH 728
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V D ++ S+LSA H+GL++EGR F M K+ ++P+ +HYACMVDLL AG +E
Sbjct: 729 VPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEV 788
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L ++D M TEP VW ALL C H +GE +LKL P + + ++S+ +A
Sbjct: 789 LCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQC 848
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W + R M G+KK PGYS V
Sbjct: 849 GRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 246/449 (54%), Gaps = 4/449 (0%)
Query: 9 YGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
+G +I +Y ++ A ++F+++ ++ ++ +++ Y FEVL L ++M
Sbjct: 261 FGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMK 320
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
++ ++ + + ++ A DL+ G+E+ A++LG +D+ V + ++++Y KCG++
Sbjct: 321 RKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELK 380
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
+A F ++ +DLV WS+ ++ LV G P EA+ ++ M+ EG+ D+ ++ L+ ACA
Sbjct: 381 KAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACA 440
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
++ SR G +H Y I+ + D+ V T+LV MY + A +F M ++V W
Sbjct: 441 EISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNT 500
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
LI+GF + G LE+ + +Q G +PDS ++VS L ACA + L LG HG ++
Sbjct: 501 LINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNG 560
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFD-QMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + + ++IDMY+KCG A LF +D +SWNV+IA Y +G EA+S F
Sbjct: 561 IESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTF 620
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
QM V+P+ TF ++L A+S+ ++ E + ++ I T + ++D+ A+
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNS-LIDMYAK 679
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+G++ + K M + G W A+LSG
Sbjct: 680 SGQLSYSEKCFHEMENK-GTISWNAMLSG 707
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 198/348 (56%), Gaps = 4/348 (1%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NS+I AYSR E + Y M + PD TFT LKAC +D G I +
Sbjct: 95 WNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIA 154
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
DVF+G+ ++++Y K G ++ A F+KM KD+ W++MI+GL + P EA++
Sbjct: 155 SRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALE 214
Query: 164 AYKRMK-KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
++RM+ +EG++ D V ++ L A + L D S+HGY +RR + V V SL+DMY
Sbjct: 215 IFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV-FGV-VSNSLIDMY 272
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+K G + LA +F M + ++W +++G+ +G L+LL EM+ + + +S+V
Sbjct: 273 SKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVV 332
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
+++LA + L+ GK +H Y ++ ++V+ T ++ MY+KCG A+ F ++ R
Sbjct: 333 NSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGR 392
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
DL+ W+ +++ G+ EALS+F +M +KPD + +SL+SA +
Sbjct: 393 DLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACA 440
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 176/376 (46%), Gaps = 7/376 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK ++ + + ++++Y + A LF + + V +N++I +++ P
Sbjct: 455 VIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLA 514
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ ++ V+PDS T L AC L DL +G ++ G +++ V +++++
Sbjct: 515 LEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDM 574
Query: 121 YVKCGKMNEAMVAFE-KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG + A F KD V W+ MI G + NG EA+ + +MK E + + V
Sbjct: 575 YAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVT 634
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ A + L R ++ H IR + SL+DMYAK+G L + F M
Sbjct: 635 FVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEME 694
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++W A++SG+A +G L L MQ DSVS +S L AC G ++ G++
Sbjct: 695 NKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRN 754
Query: 300 IHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIH 356
I + + + ++D+ G+ L D+M + D W ++ + +H
Sbjct: 755 IFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMH 814
Query: 357 GH---GEEALSLFLQM 369
+ GE AL L++
Sbjct: 815 SNVKLGEIALHHLLKL 830
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 15/278 (5%)
Query: 207 HLNLDVKVQTSLVDMYAK--TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
HL K L+ ++A+ LA + N S ++ W +LI +++ L ++
Sbjct: 57 HLLRSCKYLNPLLQIHARLIVQQCTLAPNSITNPS---LILWNSLIRAYSRLHLFQEAIK 113
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVLGTSVIDMYS 323
M G EPD + L AC G +IH R + ++ +GT ++DMY
Sbjct: 114 SYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYC 173
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDHSTFA 382
K G AR +FD+M +D+ SWN +I+ + EAL +F +M +E V+PD +
Sbjct: 174 KMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSIL 233
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
+L A+S V+ + +V + ++D+ ++ GEV+ A +I D M
Sbjct: 234 NLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSNS---LIDMYSKCGEVKLAHQIFDQMWV 290
Query: 443 EPGLAVWVALLSGCHNHKKF----SIGEKVAKKVLKLN 476
+ ++ W +++G +H + + +++ +K +K+N
Sbjct: 291 KDDIS-WATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 288/519 (55%), Gaps = 1/519 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
+FE + R V ++ ++I+ + L +++M + V DS TF VALKA
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L G+ I + ++ G+ +V +++ +Y KC K + M F KM D+V W+++I
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
V G A+DA+KRM+K + +E +I ACA+L +++G +HG+++R L
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA 387
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V S++ +Y+K G L AS VF M+R +I++W +IS + Q A L M
Sbjct: 388 LSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSR 447
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
G +P+ +L S L C + L+ GK +H Y + D ++ +++I MYS+ G
Sbjct: 448 EGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQE 507
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +FD +++ D++SW +I Y HG+ +EA+SLF + + PD+ TF +L+A +H
Sbjct: 508 ASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNH 567
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GLV+ G Y++ LM ++Y+I P+++HY C++DLL RAG + EA +V +M VW
Sbjct: 568 AGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWS 627
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
LL C +H A+++L+L+P+ G H ++N ++ + EE A VRK M+ G
Sbjct: 628 TLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKG 687
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ K PG+S + N +L+ F+ +SH + I +L+ L
Sbjct: 688 VIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELL 726
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 219/440 (49%), Gaps = 12/440 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALK 84
I AR +F ++ R ++ ++I Y + E L L++ M + ++ D +VALK
Sbjct: 100 ICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALK 159
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC M++ GE + +V+ G N VFV S+++++Y+K GK + FE M +++V
Sbjct: 160 ACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVS 219
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++I GLV G + + + M + + D ++A A+ G +G ++H +I
Sbjct: 220 WTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTI 279
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
++ N V +L MY+K D +F MS ++V+W LI + Q G L+
Sbjct: 280 KQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALD 339
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVIDMYS 323
M+ P+ + S + ACA + K G+ IHG+ +R + L + S+I +YS
Sbjct: 340 AFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYS 399
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG+ A +FD M +D+ISW+ II+ Y H +EA + M KP+ AS
Sbjct: 400 KCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALAS 459
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH----YACMVDLLARAGEVEEALKIVDS 439
+LS L+E G+ V Y + H ++ ++ + +R+G ++EA KI DS
Sbjct: 460 VLSVCGSMALLEPGK-----QVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDS 514
Query: 440 MSTEPGLAVWVALLSGCHNH 459
+ + W A+++G H
Sbjct: 515 IKNN-DIVSWTAMINGYAEH 533
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 195/386 (50%), Gaps = 16/386 (4%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLM 90
+LF ++ V ++ ++I+ Y + L + +M K DV P+ TF + AC +L
Sbjct: 308 RLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLA 367
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
K GE+I A+ LG + + V +S++ LY KCG + EA + F+ M RKD++ WS++I+
Sbjct: 368 ITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIIS 427
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
+EA + M +EG +E + ++ C + G VH Y++ L+
Sbjct: 428 VYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDH 487
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+ V ++L+ MY+++G+L AS +F ++ +IV+W A+I+G+A++G + + L +
Sbjct: 488 ETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENIS 547
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS----VIDMYSKCG 326
S G PD V+ + L AC G + LG + Y + ++ + +ID+ + G
Sbjct: 548 SVGLMPDYVTFIGILTACNHAGLVDLG--FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAG 605
Query: 327 VPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD----HSTF 381
S A + M D + W+ ++ + HG + A+ QM+ + P+ H T
Sbjct: 606 RLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLR--LHPNSAGAHITL 663
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSK 407
A++ SA SG EE + LM SK
Sbjct: 664 ANIYSA---SGRREEAAHVRKLMKSK 686
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 191/379 (50%), Gaps = 10/379 (2%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGI 173
+S L +K GK+ EA F KM +D + W+++I G V EA+ + M G+
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D+ V+ ++ACA + FG +HG+S++ L V V ++LVDMY K G +
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF+NM+ N+V+W A+I G G + L EM DS + AL A A+ G
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L GK+IH T+++ F+ + ++ MYSKC P LF +M + D++SW +I +
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y G E AL F +M ++ V P+ TFAS++SA ++ + + G + +
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA 387
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS----GCHNHKKFSIGEKV 468
+ ++ L ++ G ++EA + D M T + W ++S G H + F+ +
Sbjct: 388 LSVSNS-IITLYSKCGLLQEASLVFDGM-TRKDIISWSTIISVYCQGSHAKEAFNYLSWM 445
Query: 469 AKKVLKLNPDDLGIHALVS 487
+++ K P++ + +++S
Sbjct: 446 SREGPK--PNEFALASVLS 462
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 16/251 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
II LY + A +F+ + + + ++++II Y + E + M +E +P+
Sbjct: 394 IITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPN 453
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
L C S+ L+ G+++ A+ +G ++ V S+++++Y + G + EA F+
Sbjct: 454 EFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFD 513
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC-----ADL 190
++ D+V W++MING +G +EA+ ++ + G+ D V +G++ AC DL
Sbjct: 514 SIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDL 573
Query: 191 GDSRFGLSVHGYSI---RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTW 246
G + L + Y I + H ++D+ + G L A H+ +NM + V W
Sbjct: 574 GFYYYKLMTNEYQIAPSKEHYGC-------IIDLLCRAGRLSEAEHMVRNMPFPCDDVVW 626
Query: 247 GALISGFAQNG 257
L+ +G
Sbjct: 627 STLLRACRDHG 637
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 299/545 (54%), Gaps = 4/545 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L A + ++ALY + A ++F+ +P R + ++N+++ Y
Sbjct: 146 VIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALA 205
Query: 61 LGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L + +M V DS AL AC L +G EI A+ G DV VG+S+++
Sbjct: 206 LACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVD 265
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG + A F KM + +V W+ MI G N +P +A D + +M+ +G + V
Sbjct: 266 MYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVT 325
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ L+ ACA S FG SVH Y +RRH V ++T+L++MY K G ++ + +F ++
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+V+W +I+ + + + L +E+ + PD ++ + + A +G ++ K
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 300 IHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y V+ D L++ +V+ MY++CG +R +FD+M +D+ISWN II Y IHG
Sbjct: 446 MHSYIVKLGYGDSTLIM-NAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHG 504
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
G+ AL +F +M + ++P+ STF S+L+A S SGL EG F+ M +Y + P +HY
Sbjct: 505 QGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHY 564
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CM DLL RAGE+ E L+ +++M P +W +LL+ N I E A+++ +L
Sbjct: 565 GCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEH 624
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
++ G + ++S+ +A +WE+V +R M++ G+++ S+VE+N + +F+ D SH
Sbjct: 625 NNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHP 684
Query: 538 QYEDI 542
Q E I
Sbjct: 685 QSEKI 689
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 231/464 (49%), Gaps = 8/464 (1%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN 65
+S+ G+ +I + + A F + G +N +I ++ + P + L Y
Sbjct: 50 ISSSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYR 109
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
M+ RPD TF V LK C L G ++LG G DV+ +S++ LY K G
Sbjct: 110 AMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLG 169
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLI 184
+ +A F+ M +D+V W++M++G V NG A+ ++ M + D V ++ +
Sbjct: 170 LVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAAL 229
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
AC G +HGY+IR L DVKV TSLVDMY K G++ A +VF M +V
Sbjct: 230 AACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVV 289
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
TW +I G+A N + M+M+ GF+ + V+ ++ L ACAQ G+S+H Y
Sbjct: 290 TWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYV 349
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
VRR F ++VL T++++MY K G + +F Q+ + L+SWN +IA+Y +EA+
Sbjct: 350 VRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAI 409
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+LFL+++ + PD+ T +++ A G + + + +V T A M +
Sbjct: 410 ALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVM-HM 468
Query: 424 LARAGEVEEALKIVDSMSTEPGLAV--WVALLSGCHNHKKFSIG 465
AR G + + +I D M PG V W ++ G H + I
Sbjct: 469 YARCGNIVASREIFDKM---PGKDVISWNTIIIGYAIHGQGKIA 509
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 294/524 (56%), Gaps = 18/524 (3%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIK----EDVRPDSSTFTVALKACVSLMDLKM----- 94
+N++I + P + ++ E RPD T LKAC L
Sbjct: 71 FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130
Query: 95 -GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV 153
G ++ A + G+ + V ++++ LY CG+ +A F++M +D+V W+++++ V
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 154 FNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVK 213
G+ EA+ +M + +E + ++ AC LG +R G +VHG+ +RR +L +
Sbjct: 191 RGGRFAEALVLVGQMD---VVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLI 247
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
V +++DMY K LDLA VF + ++++W +ISG Q L LE+ EMQ
Sbjct: 248 VGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSR 307
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+PD V L + L AC +G L+ G+ +H Y R+ ++++ +GTS++DMY+KCG +
Sbjct: 308 VKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSL 367
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
++F +M ++L SWN +I + +HGHG EAL F +M+ + + P+ +F +L A HSG
Sbjct: 368 SIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSG 427
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
LV+EG F+ M + YK+ P E+HY +VDLL RAG + EA + +M P + W AL
Sbjct: 428 LVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGAL 487
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
LS C H++ +++ + V +L + G++AL+SN +A+ +W +V VR M + G++
Sbjct: 488 LSACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLMSEKGLQ 547
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL----KKLYLE 552
K PG SV+EVNG+ F++ K+H ++I +L +++YL+
Sbjct: 548 KEPGSSVIEVNGKTSEFVVGQKNHKNVDEICAMLSILMEQIYLD 591
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 186/351 (52%), Gaps = 20/351 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LYG + AR++F+E+ R V ++ +++ A+ R E L L QM DV P+
Sbjct: 154 LVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQM---DVVPN 210
Query: 76 SSTFTVALKACVSLMDLKMGEEI--W--RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
T L AC L + G+ + W R+ +L + VG+++L++YVKC K++ A
Sbjct: 211 EGTLACVLVACGRLGAARAGKAVHGWYLRRESDL----KLIVGNAVLDMYVKCEKLDLAR 266
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+++ +D++ W+ MI+GLV P +A++ + M+K + D+VV+ ++ AC LG
Sbjct: 267 RVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLG 326
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G VH Y R+ + DV V TSLVDMYAK G L+ + +F+ M N+ +W ALI+
Sbjct: 327 ALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALIN 386
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-----HGYTVR 306
GFA +G LE M + G P+ VS + L AC G ++ G + + Y +
Sbjct: 387 GFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLS 446
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI-SWNVIIASYGIH 356
++ + SV+D+ + G+ A ++ M R + +W ++++ H
Sbjct: 447 PWEEHY---GSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLSACQAH 494
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 279/498 (56%), Gaps = 4/498 (0%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+++M+ + PD+ TF +C +L L +L +D S++
Sbjct: 107 LSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITA 166
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVV 179
Y +CG + A F+++ +D V W+SMI G G REAV+ ++ M +++G + DE+
Sbjct: 167 YARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMS 226
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ L+ AC +LGD G V G+ + R + L+ + ++L+ MYAK G L+ A +F M+
Sbjct: 227 LVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMA 286
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+++TW A+ISG+AQNG+A + L M+ + ++L + L ACA IG L LGK
Sbjct: 287 ARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQ 346
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
I Y +R F ++ + T++IDMY+K G A+ +F M ++ SWN +I++ HG
Sbjct: 347 IDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGK 406
Query: 359 GEEALSLFLQMIETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
+EALSLF M + +P+ TF LLSA H+GLV+EG FD+M + + + P +H
Sbjct: 407 AKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEH 466
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y+CMVDLLARAG + EA ++ M +P ALL C + K IGE+V + +L+++
Sbjct: 467 YSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVD 526
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + G + + S +A WE+ A +R MR+ G+ K PG S +EV LH F D
Sbjct: 527 PSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLC 586
Query: 537 NQYEDIVYVLKKLYLEMR 554
D+ ++ LY E++
Sbjct: 587 LDSIDLSNIIDLLYEELK 604
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 194/392 (49%), Gaps = 39/392 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+ K L + ++ +I Y + SARK+F+E+P R ++NS+I Y++ E
Sbjct: 148 LFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREA 207
Query: 61 LGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ ++ +M + D PD + L AC L DL++G + VE G + ++GS++++
Sbjct: 208 VEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALIS 267
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG++ A F+ M +D++ W+++I+G NG EA+ + MK++ + A+++
Sbjct: 268 MYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKIT 327
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ ACA +G G + Y+ +R D+ V T+L+DMYAK+G LD A VFK+M
Sbjct: 328 LTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP 387
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ N +W A+IS A +G A L L M + G P+ ++ V L AC G + G
Sbjct: 388 QKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEG 447
Query: 298 KSIHGYTVRRFDFNLVLGTSV--IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
R FD L V I+ YS C V ARA
Sbjct: 448 -------YRLFDMMSTLFGLVPKIEHYS-CMVDLLARA---------------------- 477
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
GH EA L +M E KPD T +LL A
Sbjct: 478 -GHLYEAWDLIRKMPE---KPDKVTLGALLGA 505
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 173/337 (51%), Gaps = 16/337 (4%)
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ + RM + D +CA+L + H + L+ D SL+
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSV 279
YA+ G + A VF + + V+W ++I+G+A+ G A +E+ EM + GFEPD +
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
SLVS L AC ++G L+LG+ + G+ V R N +G+++I MY+KCG AR +FD M
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 285
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+RD+I+WN +I+ Y +G +EA+ LF M E V + T ++LSA + G ++ G+
Sbjct: 286 AARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGK 345
Query: 399 YWFDLMVSKYKIQPTEKH----YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ +Y Q +H ++D+ A++G ++ A ++ M + A W A++S
Sbjct: 346 -----QIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP-QKNEASWNAMIS 399
Query: 455 GCHNHKK----FSIGEKVAKKVLKLNPDDLGIHALVS 487
H K S+ + ++ + P+D+ L+S
Sbjct: 400 ALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLS 436
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 300/543 (55%), Gaps = 5/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR+ FE + R ++N II+ Y ++E E L+ +M + PD
Sbjct: 469 LVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPD 528
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC S+ L+ G+++ +V+ G ++ GSS++++Y KCG ++ A
Sbjct: 529 EVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILA 588
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + +V +++I G +AV+ ++ M EGI++ E+ L+ AC +
Sbjct: 589 CMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNL 647
Query: 196 GLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGF 253
G +H ++ L LD + + SL+ MY + AS +F S + V W A+ISG
Sbjct: 648 GRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGL 707
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+QN + L+L EM+SC PD + VSAL ACA + +K G H FD +
Sbjct: 708 SQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDE 767
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY+KCG + +F +M + +D+ISWN +I + +G+ E+AL +F +M +
Sbjct: 768 LTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQ 827
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V PD TF +L+A SHSG V EGR FD+MV+ Y +QP H ACMVDLL R G ++
Sbjct: 828 SHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLK 887
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + ++ ++ EP VW +L C H G++ A+K+++L P + + L+SN +A
Sbjct: 888 EAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYA 947
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W+EV +R+ MR+ G+KK+PG S + V E + F+ DKSH+ +I +LK L
Sbjct: 948 ASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTP 1007
Query: 552 EMR 554
MR
Sbjct: 1008 LMR 1010
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 246/528 (46%), Gaps = 84/528 (15%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K + G +I +Y N + AR +F+ ++ S+I Y + P E
Sbjct: 186 VVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEA 245
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ ++ +M K PD F +++N
Sbjct: 246 VKVFQEMEKVGQEPDQVAFV-----------------------------------TVINA 270
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YV G+++ A F +M +++V W+ MI+G G EA++ ++ M+K GI + +
Sbjct: 271 YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ A A L FGL VH ++++ L+ +V V +SLV MYAK G ++ A VF ++
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNE 390
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+V W A++ G+ QNG A +EL M+SCGF PD + S L ACA + +L LG +
Sbjct: 391 QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQL 450
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ +F NL +G +++DMY+K G AR F+ +++RD +SWNVII Y
Sbjct: 451 HSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDE 510
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-- 417
EA LF +M + PD + AS+LSA + +E+G+ L V K K Y
Sbjct: 511 VEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSV---KTGQETKLYSG 567
Query: 418 ACMVDLLARAGEVEEALKIVDSM------------------------------------S 441
+ ++D+ A+ G ++ A KI+ M S
Sbjct: 568 SSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLEQAVNLFRDMLVEGINS 627
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDD--LGIHAL 485
TE A +LL CH +K ++G ++ +LK L DD LG+ L
Sbjct: 628 TEITFA---SLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLL 672
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 226/467 (48%), Gaps = 6/467 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + +A LF +P R V +N +I +++ E + + M K ++
Sbjct: 267 VINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKST 326
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST L A SL L G + +A++ G ++V+VGSS++++Y KCGKM A F+
Sbjct: 327 RSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFD 386
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +++V W++M+ G V NG E ++ + MK G D+ ++ ACA L
Sbjct: 387 TLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDL 446
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ ++ V +LVDMYAK+G L+ A F+ + + V+W +I G+ Q
Sbjct: 447 GHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQ 506
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
L M G PD VSL S L ACA + L+ GK +H +V+ + L
Sbjct: 507 EEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYS 566
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+S+IDMY+KCG A + M R ++S N +IA Y + E+A++LF M+ +
Sbjct: 567 GSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLVEGI 625
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGEVEEA 433
TFASLL A + GR L++ K +Q ++ ++ + + +A
Sbjct: 626 NSTEITFASLLDACHEQQKLNLGRQIHSLIL-KMGLQLDDEFLGVSLLGMYMNSLRTTDA 684
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PD 478
+ S VW A++SG + + ++ K++ N PD
Sbjct: 685 SVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPD 731
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 199/419 (47%), Gaps = 37/419 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LY D+ A + F++L + + +NSI+ +S++ P V+ + + V P+
Sbjct: 100 IVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPN 159
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + L +C L +K G ++ V++G+ + + +++ +Y KC + +A F+
Sbjct: 160 EFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFD 219
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
D V W+SMI G + G P EAV ++ M+K G + D+V + +I A DL
Sbjct: 220 GAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDL----- 274
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G LD AS +F M N+V W +ISG A+
Sbjct: 275 ------------------------------GRLDNASDLFSRMPNRNVVAWNLMISGHAK 304
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G +E M+ G + +L S L A A + L G +H +++ N+ +
Sbjct: 305 GGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYV 364
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+S++ MY+KCG A+ +FD + ++++ WN ++ Y +G+ E + LF M
Sbjct: 365 GSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGF 424
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD T++S+LSA + ++ G +++ K K +VD+ A++G +E+A
Sbjct: 425 YPDDFTYSSILSACACLKYLDLGHQLHSVII-KNKFASNLFVGNALVDMYAKSGALEDA 482
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 174/362 (48%), Gaps = 44/362 (12%)
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I ++++LG+ + +G+ +++LY KC ++ A AF++++ KD++ W+S+++ G
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
P V + + G+ +E ++ +CA L + G VH ++ + +
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ MYAK L A +F ++ V+W ++I G+ + GL +++ EM+ G EPD
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPD 260
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
V+ V +VI+ Y G A LF +
Sbjct: 261 QVAFV----------------------------------TVINAYVDLGRLDNASDLFSR 286
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M +R++++WN++I+ + G+G EA+ F M + +K ST S+LSA++ ++
Sbjct: 287 MPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD-- 344
Query: 398 RYWFDLMVS----KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
F L+V K + + +V + A+ G++E A K+ D+++ E + +W A+L
Sbjct: 345 ---FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN-EQNVVLWNAML 400
Query: 454 SG 455
G
Sbjct: 401 GG 402
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 294/553 (53%), Gaps = 37/553 (6%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
LYG I A + FE++ R V ++N +I A S+ E LGL +M ++ VR DS+T
Sbjct: 207 LYG----IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 262
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+T +L AC L L G+++ K + D +V S+++ LY KCG EA F +Q
Sbjct: 263 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 322
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++ V W+ +I G + ++V+ + +M+ E + D+ + LI C + D G
Sbjct: 323 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 382
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ--- 255
+H ++ N + V SL+ +YAK G L A VF +MS +IV+W ++I+ ++Q
Sbjct: 383 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 442
Query: 256 -------------------NGLAGSTLELLME----------MQSCGFEPDSVSLVSALL 286
N + G+ ++ E + PD V+ V+
Sbjct: 443 IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 502
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
CA IG KLG I G+TV+ N+ + + I MYSKCG S A+ LFD + +D++S
Sbjct: 503 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVS 562
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y HG G++A F M+ KPD+ ++ ++LS SHSGLV+EG+ +FD+M
Sbjct: 563 WNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 622
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ I P +H++CMVDLL RAG + EA ++D M +P VW ALLS C H +
Sbjct: 623 RVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 682
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
E AK V +L+ D G + L++ ++ K ++ A VRK MR G+KK PGYS +EV +
Sbjct: 683 ELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENK 742
Query: 526 LHAFIMEDKSHNQ 538
+H F +D SH Q
Sbjct: 743 VHVFKADDVSHPQ 755
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 220/504 (43%), Gaps = 72/504 (14%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR-------------KESPFEVLGLYNQ 66
Y + + A +LF+ +P R V ++N+++ SR +E ++LGL+
Sbjct: 97 YAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLF-- 154
Query: 67 MIKEDV--RPDSSTFTVALKACVSLMDL--KMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
K D PD T V + +D ++ +I R + F +SML Y
Sbjct: 155 -WKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI--------FCRNSMLAGYA 205
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
K ++ A+ FE M +D+V W+ MI L +G+ REA+ M ++G+ D
Sbjct: 206 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 265
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+ ACA L +G +H IR +D V ++L+++YAK G A VF ++ N
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 325
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
V+W LI G Q ++EL +M++ D +L + + C L LG+ +H
Sbjct: 326 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHS 385
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
++ + +V+ S+I +Y+KCG A +F M RD++SW +I +Y G+ +
Sbjct: 386 LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIK 445
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM- 420
A F + M + T+ ++L A G E+G + M+S+ + P Y +
Sbjct: 446 AREFF----DGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501
Query: 421 ----------------------------------VDLLARAGEVEEALKIVDSMSTEPGL 446
+ + ++ G + EA K+ D ++ + +
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD-V 560
Query: 447 AVWVALLSGCHNHKKFSIGEKVAK 470
W A+++G H +G++ AK
Sbjct: 561 VSWNAMITGYSQH---GMGKQAAK 581
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 192/413 (46%), Gaps = 41/413 (9%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE-KMQRK 140
AL++C S L + + V +G + VF+ +++L+ Y+ CG +++A ++
Sbjct: 26 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 85
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM------MGLIQACADLGDSR 194
+++ + M+NG G +A + + RM + + + +M G +C LG
Sbjct: 86 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRE 145
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV-------------------- 234
+ G + D V+T+LVDM+ + G++D AS +
Sbjct: 146 LAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYA 205
Query: 235 -----------FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
F++M+ ++V+W +I+ +Q+G L L++EM G DS + S
Sbjct: 206 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 265
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
+L ACA++ L GK +H +R + + +++I++Y+KCG A+ +F+ +Q R+
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 325
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+SW V+I + +++ LF QM ++ D A+L+S + + GR
Sbjct: 326 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHS 385
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
L + + + ++ L A+ G+++ A + SMS E + W ++++
Sbjct: 386 LCLKSGHNRAIVVSNS-LISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 436
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I +Y I A+KLF+ L + V ++N++I YS+ + ++ M+ + +PD
Sbjct: 536 ITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 595
Query: 77 STFTVALKACVS---LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ L C + + K+ ++ + + G + F S M++L + G + EA
Sbjct: 596 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF--SCMVDLLGRAGHLTEAKDL 653
Query: 134 FEKMQRKDLV-CWSSMINGLVFNGQ 157
+KM K W ++++ +G
Sbjct: 654 IDKMPMKPTAEVWGALLSACKIHGN 678
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 292/537 (54%), Gaps = 1/537 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY +DI +A + F V +N +++AY ++ E ++ QM E +
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C SL + +GE+I + ++ G+ +V+V S ++++Y K GK++ A+
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +++ KD+V W++MI G + + EA++ +K M+ +GI +D + I ACA +
Sbjct: 531 FRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQAL 590
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + + D+ V +LV +YA+ G + A F + + ++W +LISGF
Sbjct: 591 NQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGF 650
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+G L L +M G E +S + A+ A A + +KLGK IH ++ D
Sbjct: 651 AQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSET 710
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +I +Y+KCG A F +M ++ ISWN ++ Y HGHG +ALSLF M +
Sbjct: 711 EVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQL 770
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V P+H TF +LSA SH GLV+EG +F M + + P +HYAC+VDLL R+G +
Sbjct: 771 GVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSR 830
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + V+ M +P V LLS C HK IGE A +L+L P D + L+SN +A+
Sbjct: 831 ARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAV 890
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW R+ M+ G+KK PG S +EVN +HAF D+ H + I L+ L
Sbjct: 891 TGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDL 947
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 260/506 (51%), Gaps = 9/506 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R++ LY D+ A +F+E+P+R + +N ++ + + VLGL+ +M++E V+P
Sbjct: 108 RLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKP 167
Query: 75 DSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D T+ L+ C + E+I + + GY N +FV + +++LY K G +N A
Sbjct: 168 DERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKV 227
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ +Q++D V W +M++GL +G EAV + +M G+ + ++ AC +
Sbjct: 228 FDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFY 287
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G +HG +++ +L+ V +LV +Y++ G+ A VF M + + V++ +LISG
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL 347
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+Q G + LEL +M +PD V++ S L AC+ +G L +GK H Y ++ ++
Sbjct: 348 SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDI 407
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L +++D+Y KC A F ++ +++ WNV++ +YG+ + E+ +F QM
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++P+ T+ S+L S V+ G V K Q + ++D+ A+ G+++
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDH 526
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
ALKI + E + W A+++G H+KF+ + K++ D GIH+ F +
Sbjct: 527 ALKIFRRLK-EKDVVSWTAMIAGYAQHEKFAEALNLFKEM-----QDQGIHSDNIGFASA 580
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYS 518
+ + + + V GYS
Sbjct: 581 ISACAGIQALNQGQQIHAQACVSGYS 606
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 232/445 (52%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + + A ++F + R +YNS+I S++ + L L+ +M + ++PD
Sbjct: 312 LVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPD 371
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC S+ L +G++ A++ G +D+ + ++L+LYVKC + A F
Sbjct: 372 CVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFL 431
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +++V W+ M+ E+ + +M+ EGI+ ++ +++ C+ L
Sbjct: 432 STETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDL 491
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ +V V + L+DMYAK G LD A +F+ + ++V+W A+I+G+AQ
Sbjct: 492 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQ 551
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
+ L L EMQ G D++ SA+ ACA I L G+ IH V + +L +
Sbjct: 552 HEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSV 611
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++ +Y++CG A FD++ S+D ISWN +I+ + GH EEALSLF QM +
Sbjct: 612 GNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ 671
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+ + TF +SA ++ V+ G+ +++ TE ++ L A+ G +++A
Sbjct: 672 EINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNV-LITLYAKCGNIDDAE 730
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
+ M + ++ W A+L+G H
Sbjct: 731 RQFFEMPEKNEIS-WNAMLTGYSQH 754
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 245/488 (50%), Gaps = 12/488 (2%)
Query: 3 KTNLSAYGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+T Y NS+ +I LY + SA+K+F+ L R ++ +++ S+ E
Sbjct: 195 RTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEE 254
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ L+ QM V P F+ L AC + K+GE++ ++ G+ + +V ++++
Sbjct: 255 AVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVT 314
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
LY + G A F M ++D V ++S+I+GL G +A++ +K+M + + D V
Sbjct: 315 LYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVT 374
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ L+ AC+ +G G H Y+I+ ++ D+ ++ +L+D+Y K + A F +
Sbjct: 375 VASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE 434
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+V W ++ + + ++ +MQ G EP+ + S L C+ + + LG+
Sbjct: 435 TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ 494
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH ++ F FN+ + + +IDMY+K G A +F +++ +D++SW +IA Y H
Sbjct: 495 IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEK 554
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQPTEKHY 417
EAL+LF +M + + D+ FAS +SA + + +G+ VS Y + +
Sbjct: 555 FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN- 613
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVL 473
+V L AR G+V +A D + ++ ++ W +L+SG H + S+ +++K
Sbjct: 614 -ALVSLYARCGKVRDAYFAFDKIFSKDNIS-WNSLISGFAQSGHCEEALSLFSQMSKAGQ 671
Query: 474 KLNPDDLG 481
++N G
Sbjct: 672 EINSFTFG 679
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 216/461 (46%), Gaps = 37/461 (8%)
Query: 50 AYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN 109
AYS E + + M + VR +S T+ L C+S G ++ K +++G+
Sbjct: 42 AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + +++LY+ G ++ A+ F++M + L CW+ +++ V + ++RM
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGL--SVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+E + DE G+++ C GD F +H +I + V L+D+Y K G
Sbjct: 162 QEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGF 220
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L+ A VF + + + V+W A++SG +Q+G + L +M + G P S L A
Sbjct: 221 LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C ++ F K+G+ +HG +++ F + +++ +YS+ G A +F+ M RD +S+
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSY 340
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW------ 400
N +I+ G+ ++AL LF +M +KPD T ASLLSA S G + G+ +
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIK 400
Query: 401 -------------FDLMVSKYKIQP-------TEKHYACMVDLLARA----GEVEEALKI 436
DL V I+ TE + +++ A + E+ KI
Sbjct: 401 AGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKI 460
Query: 437 VDSMS---TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
M EP + ++L C + + +GE++ +VLK
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT + +I LY +I A + F E+P + ++N+++ YS+ F+
Sbjct: 701 IIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKA 760
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKAC--VSLMD 91
L L+ M + V P+ TF L AC V L+D
Sbjct: 761 LSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVD 793
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 290/535 (54%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A K+F ++ V ++++I ++ E L++ M ++ RP+
Sbjct: 92 LVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPN 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + + ++ DL+ G+ I + G+ +D V + ++ +Y+K + + FE
Sbjct: 152 QFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFE 211
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M DLV W+++++G + + +M EG + + ++++C+ L D F
Sbjct: 212 AMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF 271
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ + D V T+LVDMYAK L+ A F + +I +W +ISG+AQ
Sbjct: 272 GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ 331
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVL 314
A ++ +MQ G +P+ +L S L C+ + L+ G+ +H V+ F ++ +
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFV 391
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++D+Y KCG A A+F + SRD++SWN II+ Y HG GE+AL F M+ +
Sbjct: 392 GSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD +TF +LSA S GLVEEG+ FD M Y I P+ +HYACMVD+L RAG+ E
Sbjct: 452 MPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVK 511
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ M+ P +W +L C H GEK AKK+ ++ P + L+SN FA +
Sbjct: 512 IFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKG 571
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+W++V +R M G+KK PG S VEV+G++H F+ +D SH + +I L KL
Sbjct: 572 RWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKL 626
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 229/440 (52%), Gaps = 6/440 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF +P + ++N+++ Y++ +VL L+ +M + + + T + LK C +
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L+ G+ + A+ G D F+G S++++Y KCG + +A+ F K++ D+V WS+M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I GL G +EA + + M+++G ++ + L+ ++GD R+G S+HG +
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D V L+ MY K+ ++ + VF+ M+ ++V+W AL+SGF + G + +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M GF+P+ + +S L +C+ + + GK +H + ++ D + +GT+++DMY+K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A FD++ +RD+ SW VII+ Y E+A+ F QM +KP+ T AS LS
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH +E GR + V A +VDL + G +E A I + + +
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSA-LVDLYGKCGCMEHAEAIFKGLISRD-IV 421
Query: 448 VWVALLSGCHNHKKFSIGEK 467
W ++SG H + GEK
Sbjct: 422 SWNTIISGYSQHGQ---GEK 438
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
++LA +F M N V+W AL++G+AQ G L+L +M+ C + +L + L
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
CA G L+ GK +H +R + + LG S++DMYSKCG A +F ++++ D+++W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+ +I GHG+EA LF M +P+ T +SL+S ++ G + G+ +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGC-IC 179
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
KY + ++ + ++ VE+ K+ ++M T P L W ALLSG ++ + G
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAM-TNPDLVSWNALLSGFYDSQTCGRGP 238
Query: 467 KVAKKVL 473
++ ++L
Sbjct: 239 RIFYQML 245
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 294/553 (53%), Gaps = 37/553 (6%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
LYG I A + FE++ R V ++N +I A S+ E LGL +M ++ VR DS+T
Sbjct: 217 LYG----IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 272
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+T +L AC L L G+++ K + D +V S+++ LY KCG EA F +Q
Sbjct: 273 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 332
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++ V W+ +I G + ++V+ + +M+ E + D+ + LI C + D G
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ--- 255
+H ++ N + V SL+ +YAK G L A VF +MS +IV+W ++I+ ++Q
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 452
Query: 256 -------------------NGLAGSTLELLME----------MQSCGFEPDSVSLVSALL 286
N + G+ ++ E + PD V+ V+
Sbjct: 453 IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
CA IG KLG I G+TV+ N+ + + I MYSKCG S A+ LFD + +D++S
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVS 572
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y HG G++A F M+ KPD+ ++ ++LS SHSGLV+EG+ +FD+M
Sbjct: 573 WNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 632
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ I P +H++CMVDLL RAG + EA ++D M +P VW ALLS C H +
Sbjct: 633 RVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 692
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
E AK V +L+ D G + L++ ++ K ++ A VRK MR G+KK PGYS +EV +
Sbjct: 693 ELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENK 752
Query: 526 LHAFIMEDKSHNQ 538
+H F +D SH Q
Sbjct: 753 VHVFKADDVSHPQ 765
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 226/519 (43%), Gaps = 76/519 (14%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y + + A +LF+ +P R V ++N+++ Y + + L + M + D P++ T
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG------------- 125
F +K+C +L ++ ++ + + D V +++++++V+CG
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200
Query: 126 ------------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
++ A+ FE M +D+V W+ MI L +G+ REA+
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M ++G+ D + ACA L +G +H IR +D V ++L+++YAK G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A VF ++ N V+W LI G Q ++EL +M++ D +L + +
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C L LG+ +H ++ + +V+ S+I +Y+KCG A +F M RD++SW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+I +Y G+ +A F + M + T+ ++L A G E+G + M+S
Sbjct: 441 TSMITAYSQIGNIIKAREFF----DGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496
Query: 407 KYKIQPTEKHYACM-----------------------------------VDLLARAGEVE 431
+ + P Y + + + ++ G +
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 556
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
EA K+ D ++ + + W A+++G H +G++ AK
Sbjct: 557 EAQKLFDLLNGKD-VVSWNAMITGYSQH---GMGKQAAK 591
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 180/379 (47%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + M+N Y K G +++A F++M R+D+ W+++++G + + ++ + M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 170 KEGID-ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G + ++++C LG + G + D V+T+LVDM+ + G++
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 229 DLASHV-------------------------------FKNMSRINIVTWGALISGFAQNG 257
D AS + F++M+ ++V+W +I+ +Q+G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGT 316
L L++EM G DS + S+L ACA++ L GK +H +R + + +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++I++Y+KCG A+ +F+ +Q R+ +SW V+I + +++ LF QM ++
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+L+S + + GR L + + + ++ L A+ G+++ A +
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAKCGDLQNAEFV 428
Query: 437 VDSMSTEPGLAVWVALLSG 455
SMS E + W ++++
Sbjct: 429 FSSMS-ERDIVSWTSMITA 446
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I +Y I A+KLF+ L + V ++N++I YS+ + ++ M+ + +PD
Sbjct: 546 ITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 605
Query: 77 STFTVALKACVS---LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ L C + + K+ ++ + + G + F S M++L + G + EA
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF--SCMVDLLGRAGHLTEAKDL 663
Query: 134 FEKMQRKDLV-CWSSMINGLVFNGQ 157
+KM K W ++++ +G
Sbjct: 664 IDKMPMKPTAEVWGALLSACKIHGN 688
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 309/551 (56%), Gaps = 9/551 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKN-DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+I TNL + + R++ K ++ A +F ++ N+++ Y+ +P
Sbjct: 34 LITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPER 93
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L Y +M ++ + D+ T+ LKAC ++ L G + +AV+ G+G DVFV + +++
Sbjct: 94 ALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLIS 153
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +CG+ A F+ KDLV W+SM+ G V+ G+ A + + M + + + ++
Sbjct: 154 MYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIM 213
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ G + ++ +R + R D+ S++D YAK G +++A +F M
Sbjct: 214 IDGYGKKMGEVNRAR--VFFDSMPTR-----DLVSWNSMIDGYAKVGEMEVAREIFDKML 266
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ N+++W +I G+AQ+ + L L +M G +PD VS+V A+ AC+Q+G L G+
Sbjct: 267 QKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRW 326
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH Y R R ++V+ T+++DMY KCG AR +F+ M R+++SWNV+I G++G
Sbjct: 327 IHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGF 386
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+EAL F QM + D F +L A SH+ LV EG + F+ M Y+++P +HY
Sbjct: 387 GKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYG 446
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
C+VDLL RAG++++ I+ SM +P A+W +LL C H+ ++ E V +++ +L D
Sbjct: 447 CLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKAD 506
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
D G++ L+SN +A WE + +RK M++ MKK G SV+EV+G + F+ +KSH
Sbjct: 507 DSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHIL 566
Query: 539 YEDIVYVLKKL 549
E+I V+ L
Sbjct: 567 REEIELVIWSL 577
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 294/553 (53%), Gaps = 37/553 (6%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
LYG I A + FE++ R V ++N +I A S+ E LGL +M ++ VR DS+T
Sbjct: 217 LYG----IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 272
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+T +L AC L L G+++ K + D +V S+++ LY KCG EA F +Q
Sbjct: 273 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 332
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++ V W+ +I G + ++V+ + +M+ E + D+ + LI C + D G
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ--- 255
+H ++ N + V SL+ +YAK G L A VF +MS +IV+W ++I+ ++Q
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 452
Query: 256 -------------------NGLAGSTLELLME----------MQSCGFEPDSVSLVSALL 286
N + G+ ++ E + PD V+ V+
Sbjct: 453 IIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
CA IG KLG I G+TV+ N+ + + I MYSKCG S A+ LFD + +D++S
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVS 572
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I Y HG G++A F M+ KPD+ ++ ++LS SHSGLV+EG+ +FD+M
Sbjct: 573 WNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 632
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ I P +H++CMVDLL RAG + EA ++D M +P VW ALLS C H +
Sbjct: 633 RVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 692
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
E AK V +L+ D G + L++ ++ K ++ A VRK MR G+KK PGYS +EV +
Sbjct: 693 ELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENK 752
Query: 526 LHAFIMEDKSHNQ 538
+H F +D SH Q
Sbjct: 753 VHVFKADDVSHPQ 765
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 227/516 (43%), Gaps = 70/516 (13%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y + + A +LF+ +P R V ++N+++ Y + + L + M + D P++ T
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG------------- 125
F +K+C +L ++ ++ + + D V +++++++V+CG
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200
Query: 126 ------------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
++ A+ FE M +D+V W+ MI L +G+ REA+
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M ++G+ D + ACA L +G +H IR +D V ++L+++YAK G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A VF ++ N V+W LI G Q ++EL +M++ D +L + +
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG-------VPSC--------- 330
C L LG+ +H ++ + +V+ S+I +Y+KCG V S
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 331 ---------------ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
AR FD M +R+ I+WN ++ +Y HG E+ L ++ M+ + V
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T+ +L + G + G V I A + + ++ G + EA
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA-ITMYSKCGRISEAQ 559
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
K+ D ++ + + W A+++G H +G++ AK
Sbjct: 560 KLFDLLNGKD-VVSWNAMITGYSQH---GMGKQAAK 591
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 180/379 (47%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + M+N Y K G +++A F++M R+D+ W+++++G + + ++ + M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 170 KEGID-ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G + ++++C LG + G + D V+T+LVDM+ + G++
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 229 DLASHV-------------------------------FKNMSRINIVTWGALISGFAQNG 257
D AS + F++M+ ++V+W +I+ +Q+G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGT 316
L L++EM G DS + S+L ACA++ L GK +H +R + + +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++I++Y+KCG A+ +F+ +Q R+ +SW V+I + +++ LF QM ++
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+L+S + + GR L + + + ++ L A+ G+++ A +
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAKCGDLQNAEFV 428
Query: 437 VDSMSTEPGLAVWVALLSG 455
SMS E + W ++++
Sbjct: 429 FSSMS-ERDIVSWTSMITA 446
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I +Y I A+KLF+ L + V ++N++I YS+ + ++ M+ + +PD
Sbjct: 546 ITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 605
Query: 77 STFTVALKACVS---LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++ L C + + K+ ++ + + G + F S M++L + G + EA
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF--SCMVDLLGRAGHLTEAKDL 663
Query: 134 FEKMQRKDLV-CWSSMINGLVFNGQ 157
+KM K W ++++ +G
Sbjct: 664 IDKMPMKPTAEVWGALLSACKIHGN 688
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/569 (34%), Positives = 296/569 (52%), Gaps = 29/569 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES-PFE 59
++K NL ++IA + + SA +F +P V YNSII A++ S P
Sbjct: 44 VLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSL 103
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ QM K + PD+ T+ LKAC L + I + G+ D+FV +S+++
Sbjct: 104 PFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLID 163
Query: 120 LYVKCGK--MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
Y +CG ++ AM F M+ +D+V W+SMI GLV G+ A + M + D
Sbjct: 164 SYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPER----DM 219
Query: 178 VVMMGLIQACADLG--DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
V ++ A G D F L R ++ +++V Y+K G +D+A +F
Sbjct: 220 VSWNTMLDGYAKAGEMDRAFEL------FERMPQRNIVSWSTMVCGYSKGGDMDMARVLF 273
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
N+V W +I+G+A+ G EL +M+ G PD L+S L ACA+ G L
Sbjct: 274 DRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLG 333
Query: 296 LGKSIHGYTVRRFDFNLVLGTSV----IDMYSKCGVPSCARALFD----QMQSRDLISWN 347
LGK IH ++RR+ F GT V IDMY+KCG C A FD M +D++SWN
Sbjct: 334 LGKRIHA-SMRRWRFRC--GTKVLNAFIDMYAKCG---CLDAAFDVFSGMMAKKDVVSWN 387
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I + +HGHGE+AL LF +M+ +PD TF LL A +H+GLV EGR +F M
Sbjct: 388 SMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKV 447
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
Y I P +HY CM+DLL R G ++EA ++ SM EP + LL+ C H
Sbjct: 448 YGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARA 507
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELH 527
V +++ K+ P D G ++L+SN +A W VA VR M +G +K G S +EV E+H
Sbjct: 508 VCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVH 567
Query: 528 AFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
F + D+SH + +DI ++ +L ++R +
Sbjct: 568 EFTVFDQSHPKSDDIYKMIDRLVQDLRQV 596
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 16/262 (6%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H ++ +L+ D+ V L+ ++ HL A +VF ++ N+ + ++I A N
Sbjct: 40 IHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTS 99
Query: 259 AGS-TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLG 315
S +MQ G PD+ + L AC L L + IH + V +F F ++ +
Sbjct: 100 HPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAH-VEKFGFYGDIFVP 158
Query: 316 TSVIDMYSKCGVPSC--ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
S+ID YS+CG A +LF M+ RD+++WN +I G E A LF +M E
Sbjct: 159 NSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPER- 217
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D ++ ++L + +G ++ F+ M + + ++ MV ++ G+++ A
Sbjct: 218 ---DMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVS-----WSTMVCGYSKGGDMDMA 269
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ D + + +W +++G
Sbjct: 270 RVLFDRCPAK-NVVLWTTIIAG 290
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 310/612 (50%), Gaps = 72/612 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ Y DI AR +FEE P+ DT YN++I +S + + L+ +M E +
Sbjct: 86 MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 74 PDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK----MN 128
PD T+ L ++D K + A++ G G V ++++++Y +C ++
Sbjct: 146 PDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLH 205
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQ------------------------------- 157
A F+ + KD W++M+ G V NG
Sbjct: 206 SARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCG 265
Query: 158 -PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
+EA++ +RM GI+ DE +I+ACA+ + G VH Y +RR +
Sbjct: 266 LYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDN 324
Query: 217 SLVDMYAK-------------------------------TGHLDLASHVFKNMSRINIVT 245
SLV +Y K +GH+ A +FK M NI++
Sbjct: 325 SLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +ISG A+NG L+L M+ GFEP + A+ +CA +G G+ H V
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLV 444
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ FD +L G ++I MY+KCGV A+ +F M D +SWN +IA+ G HGHG EA+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVD 504
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
++ +M++ ++PD TF ++L+A SH+GLV++GR +F+ M + Y+I P HYA ++DLL
Sbjct: 505 VYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLL 564
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
R+G+ EA I++S+ +P +W ALLSGC H +G A K+ L P+ G +
Sbjct: 565 CRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L+SN +A +WEEVA VRK MR G+KK S +E+ ++H F+++D SH + E +
Sbjct: 625 LLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYK 684
Query: 545 VLKKLYLEMRAI 556
L+ L EMR +
Sbjct: 685 YLQDLGKEMRRL 696
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 205/471 (43%), Gaps = 95/471 (20%)
Query: 97 EIWRKAVELGYGNDVF---------VGSSMLNLYVKCGKMNEAMVAFEK--MQRKDLVCW 145
+++ K+ EL Y +F ++M++ Y G + A FE+ + +D V +
Sbjct: 57 DVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMY 116
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-DLGDSRFGLSVHGYSI 204
++MI G N A++ + +MK EG D+ ++ A + D + + H ++
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAAL 176
Query: 205 RRHLNLDVKVQTSLVDMYA-----------------------------------KTGHLD 229
+ V +LV +Y+ K G D
Sbjct: 177 KSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFD 236
Query: 230 LASHVFKNMSR-INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
L + K M + +V + A+ISG+ GL LE++ M S G E D + S + AC
Sbjct: 237 LGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 289 AQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
A L+LGK +H Y +RR DF+ S++ +Y KCG + ARA+F++M ++DL+SWN
Sbjct: 297 ANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNA 356
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+++ Y GH EA +F +M E + ++ ++S L+ +G EEG F M +
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLFSCM-KRE 411
Query: 409 KIQPTEKHYA-----------------------------------CMVDLLARAGEVEEA 433
+P + ++ ++ + A+ G VEEA
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 434 LKIVDSMSTEPGLAVWVALLS--GCHNH--KKFSIGEKVAKKVLKLNPDDL 480
++ +M ++ W AL++ G H H + + E++ KK ++ PD +
Sbjct: 472 QQVFRTMPCLDSVS-WNALIAALGQHGHGVEAVDVYEEMLKKGIR--PDRI 519
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 132/340 (38%), Gaps = 96/340 (28%)
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI---------------- 241
+VHG I + L+D+Y K+ LD A +F +S
Sbjct: 35 AVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASG 94
Query: 242 -----------------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
+ V + A+I+GF+ N S + L +M+ GF+PD + S
Sbjct: 95 DIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASV 154
Query: 285 LLA----------CAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCG-VPS---C 330
L C Q L KS GY + +++ +YS+C PS
Sbjct: 155 LAGLALVVDDEKQCVQFHAAAL-KSGAGYVTS-------VSNALVSVYSRCASSPSLLHS 206
Query: 331 ARALFDQMQSRD--------------------------------LISWNVIIASYGIHGH 358
AR +FD + +D L+++N +I+ Y G
Sbjct: 207 ARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGL 266
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY- 417
+EAL + +M+ + ++ D T+ S++ A +++ L++ G+ V Y ++ + +
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGK-----QVHAYVLRREDFSFH 321
Query: 418 --ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+V L + G+ EA I + M + L W ALLSG
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSG 360
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
++LSA GN+ +I +Y + A+++F +P ++N++I A + E + +
Sbjct: 450 SSLSA-GNA---LITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDV 505
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY----GNDVFVGSSMLN 119
Y +M+K+ +RPD TF L AC + G + + ++E Y G D + + +++
Sbjct: 506 YEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYF-NSMETVYRIPPGADHY--ARLID 562
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLV-CWSSMINGLVFNGQ 157
L + GK +EA E + K W ++++G +G
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 24/262 (9%)
Query: 316 TSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
T+++ Y G + AR++F++ + RD + +N +I + + G A++LF +M
Sbjct: 84 TTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE---- 429
KPD T+AS+L+ L+ E+ F K +V + +R
Sbjct: 144 FKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSL 203
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ A K+ D + E W +++G + F +G+++ K + N + +A++S +
Sbjct: 204 LHSARKVFDDIP-EKDERSWTTMMTGYVKNGCFDLGKELLKG-MDENMKLVAYNAMISGY 261
Query: 490 FAMEQKWEEVAGVRKTMRKSG-----------MKKVPGYSVVEVNGELHAFIM--EDKSH 536
E + VR+ M SG ++ ++++ ++HA+++ ED S
Sbjct: 262 VNCGLYQEALEMVRR-MVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSF 320
Query: 537 NQYEDIVYVLKKL--YLEMRAI 556
+ +V + K + E RAI
Sbjct: 321 HFDNSLVTLYYKCGKFNEARAI 342
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 285/549 (51%), Gaps = 8/549 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIII-------AYSRKESPFEVLGLYNQ 66
+I+ +Y + A KLFEEL +R V ++N +I A + + + +
Sbjct: 89 NQILGVYLKCTEADDAEKLFEELSVRNVVSWNILIRGIVGCGDANENDSNQQQCFSYFKR 148
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+ E V PDS+TF CV D+ MG ++ AV+LG D FVGS +++LY +CG
Sbjct: 149 MLLELVVPDSTTFNGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGL 208
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ A F +Q +DLV W+ MI+ N P EA + M+ +G + DE L+
Sbjct: 209 VENARRVFLVVQHRDLVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSI 268
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C L FG VHG+ +R + DV V ++L++MYAK ++ A +F NM N+V W
Sbjct: 269 CDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAW 328
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+I G+ ++LL EM GF PD +++ S + C + + H + V+
Sbjct: 329 NTIIVGYGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVK 388
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F L + S+I YSKCG + A F + DL+SW +I +Y HG +EA +
Sbjct: 389 SSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATEV 448
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M+ + PD +F +LSA SH GLV +G ++F+LM S YKI P HY C+VDLL
Sbjct: 449 FEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLG 508
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
R G + EA + + SM E A ++ C+ H + + A+K+ + P+ +A+
Sbjct: 509 RYGLINEAFEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEKLFTIEPEKNVNYAV 568
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN +A + W +V VR+ M +VPG S +E+ ++H+F+ DK H + ++
Sbjct: 569 MSNIYASHRHWSDVERVRRMMGNKCDARVPGCSWIEITNQVHSFVSNDKIHPKALEMHAT 628
Query: 546 LKKLYLEMR 554
LK L M+
Sbjct: 629 LKMLLWPMK 637
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 199/420 (47%), Gaps = 20/420 (4%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
ALK L G+++ ++ G+ + + + + +L +Y+KC + ++A FE++ ++
Sbjct: 56 ALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRN 115
Query: 142 LVCWSSMINGLVFNGQPRE-------AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+V W+ +I G+V G E +KRM E + D GL C D
Sbjct: 116 VVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDID 175
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++++ L+LD V + LVD+YA+ G ++ A VF + ++V W +IS +A
Sbjct: 176 MGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCYA 235
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N L + M+ G D + + L C + + GK +HG+ +R FD +++
Sbjct: 236 LNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVL 295
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++I+MY+K A LFD M R++++WN II YG G E + L +M+
Sbjct: 296 VASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMKLLREMLREG 355
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL----ARAGE 429
PD T +S +S + + E + + ++ + + + + + L ++ G
Sbjct: 356 FSPDELTISSTISLCGYVSAITE-----TMQAHAFAVKSSFQEFLSVANSLISAYSKCGS 410
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
+ A K ++ EP L W +L++ H +V +K+L PD + ++S
Sbjct: 411 ITSACKCF-RLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLS 469
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 289/509 (56%), Gaps = 3/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ YG + A K+FEE+ R V ++ S+I A ++ +VL + ++M E + P+
Sbjct: 162 LVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPN 221
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC + G ++ + + G DV + ++++++Y KCG +++A+ AF+
Sbjct: 222 KVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQ 281
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + W+++I+G V N + +EA+ ++ M G+ D + ++ ++ ACA LG+ R
Sbjct: 282 AMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRK 341
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ VH Y + D + SL++MYAK G + A VF+ M++ ++V+W ++ G+ +
Sbjct: 342 GMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVK 401
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
L EM+ ++LVS L AC+Q+G L G+ IH Y +L L
Sbjct: 402 GHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCL 461
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM- 373
++++DMY+KCG A +F +MQ + +SWN +I +G+G+EA+ LF QM+E
Sbjct: 462 ESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQD 521
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KPD T ++L A +H G+V+EG +F LM S + P +HY C+VDLL RAG ++EA
Sbjct: 522 PKPDGITLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHYGCIVDLLGRAGMLDEA 580
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M EP +W +LL+ C H + +G+ + + ++ + P+D+G+H LVSN A E
Sbjct: 581 FHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEE 640
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W++V VR M G++K PG+S V+V
Sbjct: 641 SQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 232/467 (49%), Gaps = 19/467 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYG---GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
+++ +L++ GR+IAL ++D+ ARK+F+ + +N +I YS E+P
Sbjct: 40 LVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAP 99
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM---GEEIWRKAVELGYGNDVFVG 114
+ L ++ +M + V PD+ T + A + LK G+ I +G+ +DVFV
Sbjct: 100 RDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVM 159
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
S ++N Y + EA FE+M +D+V W+SMI+ G + + M+ EGI
Sbjct: 160 SGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGII 219
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
++V ++ L+ AC G V+ + + DV ++ +L+ MY K G L A
Sbjct: 220 PNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEA 279
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F+ M +W LI GF QN L + EM G PD ++LVS L ACAQ+G L
Sbjct: 280 FQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGEL 339
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ G +H Y + +L S+I+MY+KCG + A +F M +D++SW V++ Y
Sbjct: 340 RKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGY 399
Query: 354 GIHGHG-EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKY 408
+ GH A +LF +M V SLLSA S G +++GR Y ++ V+K
Sbjct: 400 -VKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKD 458
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ +VD+ A+ G ++ A +I M + L+ W A++ G
Sbjct: 459 LCLESA-----LVDMYAKCGCIDTASEIFRKMQHKQTLS-WNAMIGG 499
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 289/509 (56%), Gaps = 3/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ YG + A K+FEE+ R V ++ S+I A ++ +VL + ++M E + P+
Sbjct: 162 LVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPN 221
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC + G ++ + + G DV + ++++++Y KCG +++A+ AF+
Sbjct: 222 KVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQ 281
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + W+++I+G V N + +EA+ ++ M G+ D + ++ ++ ACA LG+ R
Sbjct: 282 AMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRK 341
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ VH Y + D + SL++MYAK G + A VF+ M++ ++V+W ++ G+ +
Sbjct: 342 GMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVK 401
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
L EM+ ++LVS L AC+Q+G L G+ IH Y +L L
Sbjct: 402 GHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCL 461
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM- 373
++++DMY+KCG A +F +MQ + +SWN +I +G+G+EA+ LF QM+E
Sbjct: 462 ESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQD 521
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KPD T ++L A +H G+V+EG +F LM S + P +HY C+VDLL RAG ++EA
Sbjct: 522 PKPDGITLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHYGCIVDLLGRAGMLDEA 580
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M EP +W +LL+ C H + +G+ + + ++ + P+D+G+H LVSN A E
Sbjct: 581 FHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEE 640
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W++V VR M G++K PG+S V+V
Sbjct: 641 SQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 232/467 (49%), Gaps = 19/467 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYG---GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
+++ +L++ GR+IAL ++D+ ARK+F+ + +N +I YS E+P
Sbjct: 40 LVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAP 99
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM---GEEIWRKAVELGYGNDVFVG 114
+ L ++ +M + V PD+ T + A + LK G+ I +G+ +DVFV
Sbjct: 100 RDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVM 159
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
S ++N Y + EA FE+M +D+V W+SMI+ G + + M+ EGI
Sbjct: 160 SGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGII 219
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
++V ++ L+ AC G V+ + + DV ++ +L+ MY K G L A
Sbjct: 220 PNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEA 279
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F+ M +W LI GF QN L + EM G PD ++LVS L ACAQ+G L
Sbjct: 280 FQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGEL 339
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ G +H Y + +L S+I+MY+KCG + A +F M +D++SW V++ Y
Sbjct: 340 RKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGY 399
Query: 354 GIHGHG-EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKY 408
+ GH A +LF +M V SLLSA S G +++GR Y ++ V+K
Sbjct: 400 -VKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKD 458
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ +VD+ A+ G ++ A +I M + L+ W A++ G
Sbjct: 459 LCLESA-----LVDMYAKCGCIDTASEIFRKMQHKQTLS-WNAMIGG 499
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 297/540 (55%), Gaps = 24/540 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + +V AR+ F LP V+T N++++ R E + L+ M + +
Sbjct: 286 IVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFG 345
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + AC + G+ DV V +++L+LY KC + EA + F+
Sbjct: 346 VVSLSGVFSACAEVK---------------GFDVDVCVRNAILDLYGKCKALVEAYLVFQ 390
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+++D V W+++I L N + + M + G++AD+ +++ACA L +
Sbjct: 391 EMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEY 450
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VHG +I+ L LD V +++VDMY K G + A + + +V+W ++I+GF+
Sbjct: 451 GLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSL 510
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVL 314
N + + EM G +PD + + L +CA + ++LGK IHG +++ + +
Sbjct: 511 NKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFI 570
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMY+KCG ++ +F+++Q D +SWN +I Y +HG G EAL +F + + V
Sbjct: 571 SSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANV 630
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+H+TF ++L A SH GL+++G +F LM S+YK++P +H+ACM +EAL
Sbjct: 631 APNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACM--------GPQEAL 682
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K + SM E +W LLS C + + E A VL+L+PDD ++ L+SN +A
Sbjct: 683 KFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESG 742
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW +V+ R+ MR+ +KK PG S +EV E+H F++ +K H + ++ +L L EM+
Sbjct: 743 KWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMK 802
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 236/508 (46%), Gaps = 70/508 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y D A L +P V ++N+++ Y ++ +++GL +M + V PD
Sbjct: 103 MLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPD 162
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T V LKAC L DL +G +I AV+ G DV GS+++++Y KC + +A+ F
Sbjct: 163 RTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFH 222
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK----------------KEGIDADEVV 179
M ++ V W ++I G V N Q ++ R K K +D VV
Sbjct: 223 GMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVV 282
Query: 180 MMGLIQACA---DLGDSR---FGLSVH--------------------------------- 200
++ A L D+R FGL H
Sbjct: 283 GTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGI 342
Query: 201 GYSI------------RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
G+ + + ++DV V+ +++D+Y K L A VF+ M + + V+W
Sbjct: 343 GFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNT 402
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+I+ QN T+ L EM G E D + S L ACA + L+ G +HG ++
Sbjct: 403 IIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG 462
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ + ++V+DMY KCG+ + A L D++ ++L+SWN IIA + ++ EEA F
Sbjct: 463 LGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFS 522
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M++ VKPDH T+A++L + ++ +E G+ ++ K ++ E + +VD+ A+
Sbjct: 523 EMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQII-KQEMLGDEFISSTLVDMYAKC 581
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSG 455
G + ++ + + + + W A++ G
Sbjct: 582 GNMPDSQLMFEKVQ-KLDFVSWNAMICG 608
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 53/348 (15%)
Query: 76 SSTFTVALKACVSL--MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
++TF+ + C S L G+ + + G+ +FV + +L +Y +CG A
Sbjct: 29 TATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGV 88
Query: 134 FEKMQRKDLVCWSSMI-------------------------------NGLVFNGQPREAV 162
F+ M +D V W++M+ +G G R+ V
Sbjct: 89 FDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLV 148
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
M + G+ D + L++AC L D G+ +H +++ L +DV+ ++LVDMY
Sbjct: 149 GLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMY 208
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
K L+ A H F M N V+WGA+I+G QN LELL
Sbjct: 209 GKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCR-------------- 254
Query: 283 SALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
C I L + +H + ++ +F + V+GT+++D+Y+K AR F + +
Sbjct: 255 -----CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNH 309
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+ + N ++ G G EA+ LF M + + + + + SA +
Sbjct: 310 TVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACA 357
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 106/190 (55%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK+ L ++ +Y I A KL + + + + ++NSII +S + E
Sbjct: 459 IKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQ 518
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+++M+ V+PD T+ L +C +L +++G++I + ++ D F+ S+++++Y
Sbjct: 519 KFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMY 578
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG M ++ + FEK+Q+ D V W++MI G +GQ EA++ ++R +K + + +
Sbjct: 579 AKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFV 638
Query: 182 GLIQACADLG 191
+++AC+ +G
Sbjct: 639 AVLRACSHVG 648
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 34/220 (15%)
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
+ S V L A A L G++ H V F + + ++ MY++CG + A +FD
Sbjct: 31 TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90
Query: 337 QMQSRD-------------------------------LISWNVIIASYGIHGHGEEALSL 365
M RD ++SWN +++ Y G + + L
Sbjct: 91 TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
++M V PD +T A LL A + G L V K ++ + + +VD+
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAV-KTGLEMDVRAGSALVDMYG 209
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ +E+AL M ++ W A+++GC ++++ G
Sbjct: 210 KCRSLEDALHFFHGMGERNSVS-WGAVIAGCVQNEQYMRG 248
>gi|414884271|tpg|DAA60285.1| TPA: hypothetical protein ZEAMMB73_421255 [Zea mays]
Length = 686
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 301/554 (54%), Gaps = 37/554 (6%)
Query: 42 DTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+ YN +I A P L Y +M+ +D V PD+ T+ L+AC DL +G +
Sbjct: 124 EPYNVLISACLNHGLPRHALAAYQKMVDKDAVPPDAFTYPKVLRACAETADLVLGRAVHV 183
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A G +F ++++++Y KCG + A F+ M +D+V W+SMI+G +GQ RE
Sbjct: 184 RAAAAGMDGHLFFQNALVSMYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWRE 243
Query: 161 AVDAYKRMKKEGIDADEVV----------------MMGLIQ------------------- 185
AV+ +++M+ EG +A+ V +GLI+
Sbjct: 244 AVELFRQMQAEGAEANSVTWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSN 303
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
AC+ G R G +HG ++R + V +++ MYA+ ++ A +F+ M +V
Sbjct: 304 ACSRAGWLRLGKEIHGLAVRMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRCPGLVA 363
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +++GFA A + L EM +P+ V++V+ L CA++ L+ G+ +H + +
Sbjct: 364 WNTMLAGFALLDDAEAASRLFREMVCSDVQPNYVTVVTYLALCARVANLQHGQELHAHII 423
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R+ F +L S+IDMYSK G S A+ +FD M RD+IS+ +IA YG+ G G +L
Sbjct: 424 RQGFKRYCLLWNSLIDMYSKSGRLSVAQNVFDTMDDRDMISFTSMIAGYGMQGKGIVSLR 483
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
F QMI++ + PD ++LSA SHSGLV+EG FD MVS Y I+P +HY+CMVDL
Sbjct: 484 FFKQMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVSSYGIKPQMEHYSCMVDLY 543
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
ARAG +E+A ++++ P + AL+ CH IGE+ A+++L++ ++ G +
Sbjct: 544 ARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNVIIGERSARRLLEMKTENAGHYV 603
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L++N +A W E+A VRK MR G+ K PG + ++ F++ D+S+ +I
Sbjct: 604 LIANMYAAAGCWNELATVRKLMRDMGVMKAPGLAWADLGNGFTPFLVGDRSNPLAPEIYE 663
Query: 545 VLKKLYLEMRAISS 558
VL +L +MR +S+
Sbjct: 664 VLDELTEQMRNMSN 677
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 165/359 (45%), Gaps = 37/359 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-------- 67
++++Y D+ +AR++F+ + R V ++NS+I Y+ E + L+ QM
Sbjct: 200 LVSMYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEAN 259
Query: 68 -----------------------IKEDVRP----DSSTFTVALKACVSLMDLKMGEEIWR 100
I++ VR D T + AC L++G+EI
Sbjct: 260 SVTWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHG 319
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
AV + V ++++ +Y +C M A++ F M+ LV W++M+ G
Sbjct: 320 LAVRMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEA 379
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A ++ M + + V ++ + CA + + + G +H + IR+ + SL+D
Sbjct: 380 ASRLFREMVCSDVQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLID 439
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY+K+G L +A +VF M +++++ ++I+G+ G +L +M G PD++
Sbjct: 440 MYSKSGRLSVAQNVFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAII 499
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQ 337
+V+ L AC+ G + G+ + V + + + ++D+Y++ G+ A L +Q
Sbjct: 500 MVTVLSACSHSGLVDEGEELFDKMVSSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQ 558
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y ND+ A LF + G+ +N+++ ++ + L+ +M+ DV
Sbjct: 333 VNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEAASRLFREMVCSDV 392
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P+ T L C + +L+ G+E+ + G+ + +S++++Y K G+++ A
Sbjct: 393 QPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQN 452
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA---- 188
F+ M +D++ ++SMI G G+ ++ +K+M GI D ++M+ ++ AC+
Sbjct: 453 VFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSHSGL 512
Query: 189 -DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
D G+ F V Y I+ + + + +VD+YA+ G L+ A +
Sbjct: 513 VDEGEELFDKMVSSYGIKPQM----EHYSCMVDLYARAGLLEKAEELLNQ 558
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D R GL +HG S+ L+ + L+ Y+ L L + + + LIS
Sbjct: 73 DIRIGLQLHGLSLSAGLSCYSHLLPHLLSFYSHHPSL-LPTASSLAAGSTSPEPYNVLIS 131
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+GL L +M PD+ + L ACA+ L LG+++H D
Sbjct: 132 ACLNHGLPRHALAAYQKMVDKDAVPPDAFTYPKVLRACAETADLVLGRAVHVRAAAAGMD 191
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L +++ MY+KCG + AR +FD M +RD++SWN +I+ Y G EA+ LF QM
Sbjct: 192 GHLFFQNALVSMYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQM 251
Query: 370 -------------------------------IETMVKP----DHSTFASLLSALSHSGLV 394
I MV+ D T +A S +G +
Sbjct: 252 QAEGAEANSVTWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWL 311
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G+ L V + + + ++ + AR ++E AL + +M PGL W +L+
Sbjct: 312 RLGKEIHGLAV-RMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRC-PGLVAWNTMLA 369
Query: 455 G 455
G
Sbjct: 370 G 370
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 300/566 (53%), Gaps = 5/566 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY DI A ++F+ V +N +++AY + + + ++ +M+ VR
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVR 342
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C ++ +GE+I ++ G+ +D++V ++++Y K G +++A
Sbjct: 343 PNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ ++ KD+V W+SMI G V + +EA++ +K M+ GI D + + I ACA +
Sbjct: 403 LDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAV 462
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + DV + LV +YA+ G A F+ + +TW LISGF
Sbjct: 463 HQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGF 522
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+GL L++ M+M G + + + VS++ A A + +K GK IH ++ +
Sbjct: 523 AQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSET 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I +Y KCG A+ F +M R+ +SWN II HG G EAL LF QM +
Sbjct: 583 EISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQ 642
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP TF +L+A SH GLVEEG +F M +++ I P HYAC+VD+L RAG+++
Sbjct: 643 GLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDR 702
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + V+ M VW LLS C HK IGE AK +L+L P D + L+SN +A+
Sbjct: 703 AKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KW +RK M+ G++K PG S +EV +HAF + D+ H + I L L
Sbjct: 763 TGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDR 822
Query: 553 MRAIS----SWLQGHMEEHEEHDPLS 574
+ I ++ H +E E DP +
Sbjct: 823 LYKIGYKQENYHLFHEKEKEGKDPTA 848
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 229/456 (50%), Gaps = 5/456 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I LS Y +I LY K + AR++FEEL +R ++ +++ Y++ E +
Sbjct: 69 IICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAV 128
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
LY +M + V P + L AC ++G I + + G+ ++ FVG+++++LY
Sbjct: 129 RLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLY 188
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
++C A F M D V ++++I+G G A+ + M+ G+ D V +
Sbjct: 189 LRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIA 248
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+ AC+ +GD R G +H Y ++ ++LD ++ SL+D+Y K+G ++ A +F + R
Sbjct: 249 SLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRT 308
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N+V W ++ + Q + ++ M + G P+ + L C G + LG+ IH
Sbjct: 309 NVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIH 368
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
T++ F ++ + +IDMYSK G A+ + D ++ +D++SW +IA Y H +
Sbjct: 369 SLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCK 428
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYAC 419
EAL F +M + PD+ AS +SA + V +G + + VS Y + +
Sbjct: 429 EALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI--WNG 486
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+V L AR G +EA +++ + G+ W L+SG
Sbjct: 487 LVYLYARCGISKEAFSSFEAIEHKEGI-TWNGLISG 521
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 224/453 (49%), Gaps = 6/453 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEE 97
RG ++N + + + P ++L L+ ++ + + F AL+AC S + E
Sbjct: 4 RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPE 63
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I KA+ G +G+ +++LY K G + A FE++ +D V W ++++G NG
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EAV Y+ M + G+ V+ ++ AC + G +H ++ + V +
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ +Y + LA VF +M + VT+ LISG AQ G L + EMQ G PD
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
SV++ S L AC+ +G L+ GK +H Y ++ + ++ S++D+Y K G A +FD
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ WN+++ +YG ++ +F +M+ V+P+ T+ +L +H+G +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL 363
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G L + K Q ++D+ ++ G +++A +I+D M E + W ++++G
Sbjct: 364 GEQIHSLTI-KNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVVSWTSMIAGY 421
Query: 457 HNHK--KFSIGEKVAKKVLKLNPDDLGIHALVS 487
H+ K ++ + + PD++G+ + +S
Sbjct: 422 VQHEFCKEALETFKEMQACGIWPDNIGLASAIS 454
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 290/524 (55%), Gaps = 1/524 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF + YN++I + E L L+ + K + TF + LKAC +
Sbjct: 67 LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
K+G ++ V+ G+ +DV +S+L++Y G++N+A FE++ + +V W+++ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
G+ REA+D +K+M + G+ D ++ ++ AC +GD G + + + +
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V+T+LV++YAK G ++ A VF +M +IVTW +I G+A N +E ++M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGK-SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSC 330
+PD S+V L +CA +G L LG+ I F NL + ++IDMY+KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+F +M+ +D++ N I+ +GH + + ++F Q + + PD STF LL H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+++G +F+ + Y ++ T +HY CMVDL RAG +++A +++ M P VW
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
ALLSGC K + E V K+++ L P + G + +SN +++ +W+E A VR M + G
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKG 546
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
MKK+PGYS +E+ G +H F+ +DKSH + I L+ L EMR
Sbjct: 547 MKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 231/480 (48%), Gaps = 59/480 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y G + A K+FEE+P R V T+ ++ Y+ E + L+ +M++ VRPD
Sbjct: 152 LLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPD 211
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S L ACV + DL GE I + E+ + FV ++++NLY KCGKM +A F+
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD--- 192
M KD+V WS+MI G N P+E ++ + +M +E + D+ ++G + +CA LG
Sbjct: 272 SMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 193 SRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+G+S+ I RH L ++ + +L+DMYAK G + VFK M +IV A IS
Sbjct: 332 GEWGISL----IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G A+NG + + + + G PD + + L C G ++ G RF FN
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG--------LRF-FN 438
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ SC AL R + + ++ +G G ++A L M
Sbjct: 439 AI---------------SCVYAL-----KRTVEHYGCMVDLWGRAGMLDDAYRLICDM-- 476
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYACMVDLLARAGEV 430
++P+ + +LLS LV++ + ++ ++P +Y + ++ + +G
Sbjct: 477 -PMRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRW 532
Query: 431 EEALKIVDSMSTE-----PGLAVWVALLSGCH----NHKKFSIGEKVAKKVLKLNPDDLG 481
+EA ++ D M+ + PG + W+ L H + K + +K+ K+ +DLG
Sbjct: 533 DEAAEVRDMMNRKGMKKIPGYS-WIELEGTVHEFLADDKSHPLSDKIYAKL-----EDLG 586
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 186/373 (49%), Gaps = 5/373 (1%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D F+ + +L + + + + + F Q ++ ++++ING V N E +D + +
Sbjct: 43 HDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSI 102
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+K G++ +++AC + + G+ +H ++ N DV TSL+ +Y+ +G L
Sbjct: 103 RKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A VF+ + ++VTW AL SG+ G ++L +M G PDS +V L AC
Sbjct: 163 NDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSAC 222
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+G L G+ I + N + T+++++Y+KCG AR++FD M +D+++W+
Sbjct: 223 VHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWS 282
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y + +E + FLQM++ +KPD + LS+ + G ++ G W ++ +
Sbjct: 283 TMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE-WGISLIDR 341
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIG 465
++ ++D+ A+ G + ++ M E + + A +SG + H K S
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 466 EKVAKKVLKLNPD 478
+ L ++PD
Sbjct: 401 VFGQTEKLGISPD 413
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/496 (33%), Positives = 283/496 (57%), Gaps = 11/496 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR +FE + V +NS+I YS +P + L Y +M+++ PD TF LKAC
Sbjct: 59 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 118
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D++ G + V+ G+ +++V + +L++Y+ CG++N + FE + + ++V W S+
Sbjct: 119 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSL 178
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G V N + +A++A++ M+ G+ +E +M+ L+ AC D +
Sbjct: 179 ISGFVNNNRFSDAIEAFREMQSIGVKPNETIMVDLLVACGRCFDPY---------CQSKF 229
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V + TSL+DMYAK G + A ++F M N+V+W ++I+G++QNG A + + +
Sbjct: 230 EFNVILATSLIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSD 289
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M G PD V+ S + A G +LG++IH Y + F + + ++++MY+K G
Sbjct: 290 MLDLGIAPDKVTFFSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGN 349
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLS 386
A+ +F+ ++ +D I+W V+I HGHG +ALS+F +M E PD T+ +L
Sbjct: 350 AESAKKMFEDLEKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLY 409
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SH GLVEEG+ +F M Y ++PT +HY CMVD+L+RAG EEA ++V +M +P
Sbjct: 410 ACSHIGLVEEGQRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTA 469
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL+GC H+ + +++ V + GI+ L+SN +A +W +V +R++M
Sbjct: 470 NIWGALLNGCEIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESM 529
Query: 507 RKSGMKKVPGYSVVEV 522
+ + K+ +S VE
Sbjct: 530 KSKRVDKLLAHSSVET 545
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 190/363 (52%), Gaps = 15/363 (4%)
Query: 115 SSMLNLYVKCGK---MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
S +++ C + ++ A FE + + W+SMI G + P +A+ Y+ M ++
Sbjct: 41 SRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRK 100
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G D +++AC+ L D +FG VHG+ ++ +++ V T L+ MY G ++
Sbjct: 101 GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWG 160
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VF+++ ++N+V WG+LISGF N +E EMQS G +P+ +V L+AC
Sbjct: 161 LRVFEDIPKLNVVAWGSLISGFVNNNRFSDAIEAFREMQSIGVKPNETIMVDLLVAC--- 217
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G+ Y +F+FN++L TS+IDMY+KCG AR LFD M R+L+SWN II
Sbjct: 218 -----GRCFDPYCQSKFEFNVILATSLIDMYAKCGDMRTARYLFDGMPERNLVSWNSIIT 272
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y +G EEA+ +F M++ + PD TF S++ A G + G+ VSK
Sbjct: 273 GYSQNGDAEEAMCMFSDMLDLGIAPDKVTFFSVIRASMIQGCSQLGQT-IHAYVSKTGFV 331
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA---VWVALLSGCHNHKKFSIGEKV 468
+V++ A+ G E A K+ + + + +A V + L S H +K SI +++
Sbjct: 332 KDAAIVCALVNMYAKTGNAESAKKMFEDLEKKDTIAWTVVIIGLASHGHGNKALSIFQRM 391
Query: 469 AKK 471
++
Sbjct: 392 QEE 394
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 125/241 (51%), Gaps = 5/241 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ +AR LF+ +P R + ++NSII YS+ E + +++ M+ + PD
Sbjct: 239 LIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIAPD 298
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF ++A + ++G+ I + G+ D + +++N+Y K G A FE
Sbjct: 299 KVTFFSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKKMFE 358
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+++KD + W+ +I GL +G +A+ ++RM++EG D + +G++ AC+ +G
Sbjct: 359 DLEKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIGLVE 418
Query: 195 FGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
G +R L+ V+ +VD+ ++ G + A + K M + WGAL++
Sbjct: 419 EGQRYFA-EMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTANIWGALLN 477
Query: 252 G 252
G
Sbjct: 478 G 478
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 286/528 (54%), Gaps = 18/528 (3%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
++SII Y+ +N M V P+ F LKA L K+ + V
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 104 ELGYGNDVFVGSSMLNLYVK---CGKMNEAMV------------AFEKMQRKDLVCWSSM 148
LG +D+++ ++++N Y K GK+ + F+ M +D+V W+++
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 149 INGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I G NG EA+D + M K G + D + ++ A+ D G +HGY++R
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ DV + +SL+DMYAK L+ + F + R + ++W ++I+G QNG L
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M +P +VS S + ACA + L LG+ +HG VR FD N + +S++DMY+KCG
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG 377
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR +FD++ RD+++W II +HGH +A+SLF M+E V+P + F ++L+
Sbjct: 378 NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLT 437
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM-STEPG 445
A SH+GLV+EG +F+ M + I P +HYA + DLL RAG +EEA + +M +P
Sbjct: 438 ACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPT 497
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
+VW LL+ C HK + EKV K+L ++ +++G + L+SN ++ Q+W++ A +R
Sbjct: 498 GSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIH 557
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
MRK G+KK P S +EV ++H F+ DKSH Y+ I L L +M
Sbjct: 558 MRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQM 605
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 185/361 (51%), Gaps = 11/361 (3%)
Query: 5 NLSAYGNSVGRIIALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
N A ++ G++ ++ G++ I +K+F+ +P+R V ++N++I +++ E L
Sbjct: 153 NTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALD 212
Query: 63 LYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ +M K ++PDS T + L +D+ G+EI AV G+ DVF+GSS++++Y
Sbjct: 213 MVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMY 272
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC ++ ++ AF + RKD + W+S+I G V NG+ + ++RM KE + V
Sbjct: 273 AKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFS 332
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I ACA L G +HG +R + + + +SLVDMYAK G++ +A +VF + +
Sbjct: 333 SVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKR 392
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V W A+I G A +G A + L M G P V+ ++ L AC+ G + G
Sbjct: 393 DMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYF 452
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSRDLIS--WNVIIASYGI 355
R DF + G +V D+ + G A M+ W++++A+
Sbjct: 453 NSMER--DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRA 510
Query: 356 H 356
H
Sbjct: 511 H 511
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 288/506 (56%), Gaps = 1/506 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D+ +ARK+F+ + R V ++ S++ + E L L+N+M +E V P
Sbjct: 163 LVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPS 222
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L L G + ++ G + F+ +++L++YVKCG++ +A F+
Sbjct: 223 EYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFD 282
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ DLV W++MI G NG P +A+ + K I + V + ++ A A L +
Sbjct: 283 ELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSL 342
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H S++ + + V +LVDMYAK L A+ +F +S ++VTW +LI+G+ +
Sbjct: 343 GRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVE 402
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N + L L +M+ G PD++S+V+AL AC +G L +GK H Y V+R F N+ +
Sbjct: 403 NDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYV 462
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++++Y+KC A+ +F +M R+ ++W +I YG+ G ++ L +M++ +
Sbjct: 463 NTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNI 522
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ F S+LS SH+G+V G+ FD M + I P+ KHYACMVD+LARAG +EEAL
Sbjct: 523 QPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEAL 582
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + M +++W A L GC H + GE+ +++ L+PD + L+SN +
Sbjct: 583 EFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYG 642
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W++ +R+ M++ G+ K+PG S V
Sbjct: 643 RWDKSLAIRRLMQERGLVKLPGCSSV 668
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 225/444 (50%), Gaps = 6/444 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DV 72
++++ Y D+ SAR++ +E P TY + ++ + L L+ M + +
Sbjct: 60 KLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEA 119
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
D ++ALKA V D + G + AV+ G G D FV + ++++Y K G + A
Sbjct: 120 HDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARK 178
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ +++V W+SM++G + NG E + + M++E + E M ++ AC LG
Sbjct: 179 VFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGS 238
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VHG I+ + + + +++DMY K G ++ A +F + +++V W +I G
Sbjct: 239 LHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVG 298
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-N 311
+ QNG L L + + P+SV++ + L A AQ+ L LG+ IH +V+ N
Sbjct: 299 YTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIEN 358
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
V+ +++DMY+KC S A +F ++ ++D+++WN +IA Y + G EAL LF QM
Sbjct: 359 DVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRV 418
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
PD + + LSA G + G+ + V + + + A +++L + ++
Sbjct: 419 QGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTA-LLNLYNKCADLP 477
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
A ++ MS E W A++ G
Sbjct: 478 SAQRVFSEMS-ERNSVTWGAMIGG 500
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 288/507 (56%), Gaps = 2/507 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y ++ +A++LF+E+ R + +++II A+ + P E L L+ M E ++ +
Sbjct: 29 IMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQAN 88
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+L AC + LK+G+ + AV+ D+ VG++++++Y KCG A+ F
Sbjct: 89 KVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFN 148
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KD+V W++MING G+P A++ + +++ ++ + M+GL+ A A L D
Sbjct: 149 RMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQ 208
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSRINIVTWGALISGFA 254
G +HG I+ + V+T+L+DMYAK G L A +F + R + V+W +I+G+
Sbjct: 209 GSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYM 268
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+G A +M+ +P+ V++V+ L A A + L+ G ++H Y +R F
Sbjct: 269 HSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTP 328
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G +IDMY+KCG + +F +M+++D +SWNV++A Y +HG G A+ LF +M ++
Sbjct: 329 VGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSE 388
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++ D +F ++LSA H+GL+ EGR FD M +++++P +HYACM DLL RAG E
Sbjct: 389 IRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEV 448
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L ++ SM EP VW ALL H + E + KL +L +A +SN +A
Sbjct: 449 LDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYAALSNTYARS 508
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W +V R + K+G++K PGYS V
Sbjct: 509 GRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 211/374 (56%), Gaps = 4/374 (1%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L G EI A + G +DV V + ++ +Y +CG+++ A F++++ +DLV WS++I
Sbjct: 4 LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
V +G P+EA+ ++ M+ EG+ A++V+++ + ACA++ + G S+H +++ +++LD
Sbjct: 64 FVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLD 123
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V T+LV MYAK G LA +F M ++VTW A+I+G+AQ G LE+ ++Q
Sbjct: 124 ISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQL 183
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
P+S ++V L A A + L G IHG ++ F+ + T++IDMY+KCG S
Sbjct: 184 SELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSG 243
Query: 331 ARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A LF + R D +SWNV+IA Y GH +A S F QM ++P+ T ++L A++
Sbjct: 244 AEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVA 303
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H + G V + Q C++D+ A+ G ++ + KI M + ++ W
Sbjct: 304 HLSALRAGMT-LHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVS-W 361
Query: 450 VALLSGCHNHKKFS 463
+L+G H + S
Sbjct: 362 NVMLAGYAVHGRGS 375
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 279/475 (58%), Gaps = 7/475 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS+T++ +K C+S + G I R G+ +F+ + ++N+YVK +N+A F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +++++ W++MI+ ++A++ M ++ + + ++++C + D R
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H I+ L DV V+++L+D++AK G + A VF M + + W ++I GFA
Sbjct: 180 M---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QN + LEL M+ GF + +L S L AC + L+LG H + V+ +D +L+L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-YDQDLIL 295
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY KCG A +F+QM+ RD+I+W+ +I+ +G+ +EAL LF +M +
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP++ T +L A SH+GL+E+G Y+F M Y I P +HY CM+DLL +AG++++A+
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+++ M EP W LL C + + E AKKV+ L+P+D G + L+SN +A Q
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW+ V +R MR G+KK PG S +EVN ++HAFI+ D SH Q IV V KKL
Sbjct: 476 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ---IVEVSKKL 527
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 192/348 (55%), Gaps = 18/348 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y N + A +LF+++P R V ++ ++I AYS+ + + L L M++++V
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP+ T++ L++C + D++M + ++ G +DVFV S++++++ K G+ +A+
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M D + W+S+I G N + A++ +KRMK+ G A++ + +++AC L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ H + ++ + D+ + +LVDMY K G L+ A VF M +++TW +ISG
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGYTV 305
AQNG + L+L M+S G +P+ +++V L AC+ G L+ G K ++G
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
R + +ID+ K G A L ++M+ D ++W ++ +
Sbjct: 394 VREHYG-----CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 293/542 (54%), Gaps = 10/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG-LYNQMIKEDVRP 74
+I +Y + +A+++F+ + V Y S+I A+ R FE+ QM+K+ ++P
Sbjct: 155 LIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN-GEFELAAEALIQMLKQGLKP 213
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ T T L AC ++ ++ + +K +G V+ +++++ Y + G+ A
Sbjct: 214 NEHTMTTILTACPRVLGQQIHGYLIKK---IGLRSQSVYSSTALIDFYSRNGEFKLAKAV 270
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + K++V W SM+ + +G+ EA+ + M EG+D +E + ++ AC +G
Sbjct: 271 FDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG-- 328
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +I+ L D++V +L+ MY +TG ++ + + ++V+W IS
Sbjct: 329 -LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISAN 387
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG + LL +M S GF P+ + S L +CA + L G H ++ D +
Sbjct: 388 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 447
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
G ++I+MYSKCG AR FD M + D+ SWN +I + HG +AL +F +M
Sbjct: 448 CTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSN 507
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD STF +L +HSG+VEEG +F LM+ +Y P HYACM+D+L R G +E
Sbjct: 508 GIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDE 567
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL++++ M EP +W LL+ C H+ IG+ A ++++L+ D + L+SN +AM
Sbjct: 568 ALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAM 627
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+WE+ VR+ M ++G+KK G S +E+N E+H F D SH + I +L +L
Sbjct: 628 HGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAV 687
Query: 553 MR 554
M+
Sbjct: 688 MQ 689
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 232/459 (50%), Gaps = 14/459 (3%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A LF+ +P + V + S++ Y+R P L ++ M++ V P+ AL A
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C L L+ GE++ AV G+ D ++GS ++ +Y +CG + A F++M D+V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+S+I+ NG+ A +A +M K+G+ +E M ++ AC + G +HGY I+
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIK 239
Query: 206 R--HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ + V T+L+D Y++ G LA VF ++ N+V+W +++ + ++G L
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
++ +M S G +P+ +L L AC IG LG+ +H ++ ++ + +++ MY
Sbjct: 300 QVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMY 356
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+ G+ A+ +++++ DL+SW I++ +G GE+A++L QM P+ F+
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFS 416
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S+LS+ + +++G F + K ++++ ++ G++ A D M T
Sbjct: 417 SVLSSCADVASLDQG-MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 475
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDD 479
+ W +L+ G H + +V K+ + PDD
Sbjct: 476 H-DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 513
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 179/349 (51%), Gaps = 12/349 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + LN VK G++ +A+ F++M RK++V W+S+++G NG+P A+ + M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ ++ + ACADLG R G VH ++R D + + L++MY++ G L
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF M ++V + +LIS F +NG E L++M G +P+ ++ + L AC
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 290 QIGFLKLGKSIHGYTVRRFDF---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
++ LG+ IHGY +++ ++ T++ID YS+ G A+A+FD + ++++SW
Sbjct: 227 RV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSW 282
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
++ Y G EEAL +F MI V P+ + +L A GL GR
Sbjct: 283 CSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQ-LHCSAI 338
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K+ + + ++ + R G VEE +++ + P L W +S
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN-PDLVSWTTAISA 386
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 308/551 (55%), Gaps = 9/551 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKN-DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+I TNL + + R++ K ++ A +F ++ N+++ Y+ +P
Sbjct: 34 LITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPER 93
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L Y +M K+ + D+ T+ LKAC ++ L G + +AV+ G+G DVFV + +++
Sbjct: 94 ALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLIS 153
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +CG+ A F+ KDLV W+SM+ G V+ G+ A + + M + + + ++
Sbjct: 154 MYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIM 213
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ G + ++ +R + R D+ S++D YAK G +++A +F M
Sbjct: 214 IDGYGKKMGEVNRAR--VFFDSMPTR-----DLVSWNSMIDGYAKVGEMEVAREIFBKML 266
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ N+++W +I G+A + + L L +M G +PD VS+V A+ AC+Q+G L G+
Sbjct: 267 QKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRW 326
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH Y R R ++V+ T+++DMY KCG AR +F+ M R+++SWNV+I G++G
Sbjct: 327 IHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGF 386
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+EAL F QM + D F +L A SH+ LV EG + F+ M Y+++P +HY
Sbjct: 387 GKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYG 446
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
C+VDLL RAG++++ I+ SM +P A+W +LL C H+ ++ E V +++ +L D
Sbjct: 447 CLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKAD 506
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
D G++ L+SN +A WE + +RK M++ MKK G SV+EV+G + F+ +KSH
Sbjct: 507 DSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHIL 566
Query: 539 YEDIVYVLKKL 549
E+I V+ L
Sbjct: 567 REEIELVIWSL 577
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/427 (38%), Positives = 249/427 (58%), Gaps = 1/427 (0%)
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
C M+ A F ++Q ++ W++MI G + P A++ Y++M I+ D L
Sbjct: 87 CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
++A A L D R G VH +IR V VQ +LV MYA GH + A +F+ M+ N+
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNL 206
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
VTW ++I+G+A NG L L EM G EPD ++VS L ACA++G L LG+ H Y
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVY 266
Query: 304 TVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
V+ D NL G +++D+Y+KCG A +FD+M+ + ++SW +I ++G G+EA
Sbjct: 267 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 326
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L LF ++ + P TF +L A SH G+V+EG +F M +Y I P +HY CMVD
Sbjct: 327 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 386
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
LL RAG V++A + + +M +P VW LL C H ++GE ++L+L P G
Sbjct: 387 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGD 446
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ L+SN +A EQ+W +V VR+TM + G+KK PG+S+VE+ LH F+M D+SH Q E+I
Sbjct: 447 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEI 506
Query: 543 VYVLKKL 549
L ++
Sbjct: 507 YVKLAEI 513
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 191/368 (51%), Gaps = 15/368 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F ++ + T+N++I Y+ E+P L LY QM + PD+ T+ LKA
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
LMD++ GE++ A+ G+ + VFV ++++++Y CG A FE M ++LV W+S+
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
ING NG+P EA+ ++ M G++ D M+ L+ ACA+LG G H Y ++ L
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ ++ +L+D+YAK G + A VF M ++V+W +LI G A NG LEL E
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS----VIDMYSK 324
++ G P ++ V L AC+ G + G + + ++ +V ++D+ +
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDY--FKRMKEEYGIVPKIEHYGCMVDLLGR 390
Query: 325 CGVPSCARALFDQMQSR-DLISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHST 380
G+ A M + + + W ++ + IHGH GE A + LQ+ +P HS
Sbjct: 391 AGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQL-----EPKHSG 445
Query: 381 FASLLSAL 388
LLS L
Sbjct: 446 DYVLLSNL 453
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 4/245 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y SA KLFE + R + T+NS+I Y+ P E L L+ +M V PD
Sbjct: 181 LVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPD 240
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L L +G V++G ++ G+++L+LY KCG + +A F+
Sbjct: 241 GFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFD 300
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ K +V W+S+I GL NG +EA++ +K ++++G+ E+ +G++ AC+ G
Sbjct: 301 EMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDE 360
Query: 196 GLSVHGYSIRRHLNLDVKVQT--SLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
G + ++ + K++ +VD+ + G + A +NM + N V W L+
Sbjct: 361 GFD-YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419
Query: 253 FAQNG 257
+G
Sbjct: 420 CTIHG 424
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 26/199 (13%)
Query: 271 SCGFEPDSVSL---VSALLACAQIGFLKLGKSIHGYTVRRFD--FNLVLGTSVI-DMYSK 324
+C P S L ++ LL+CA F + IH +++R N +G +I + S
Sbjct: 29 TCPESPKSYILKKCIALLLSCASSKFK--FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSF 86
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
C S A +F Q+Q+ ++ +WN +I Y + AL L+ QM + ++PD T+ L
Sbjct: 87 CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146
Query: 385 LSALSHSGLVEEG--------RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
L A++ V EG R F+ +V +Q T +V + A G E A K+
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVF---VQNT------LVHMYAACGHAESAHKL 197
Query: 437 VDSMSTEPGLAVWVALLSG 455
+ M+ E L W ++++G
Sbjct: 198 FELMA-ERNLVTWNSVING 215
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M+K L ++ ++ LY I A K+F+E+ + V ++ S+I+ + E
Sbjct: 267 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 326
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRK-AVELGYGNDVFVGSSMLN 119
L L+ ++ ++ + P TF L AC + G + +++ E G + M++
Sbjct: 327 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 386
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQ 157
L + G + +A + M + + V W +++ +G
Sbjct: 387 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 425
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 310/567 (54%), Gaps = 34/567 (5%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N++ + A G +D S LFE+ R + T+NS+I ++S+ E E L M+ E
Sbjct: 154 NALMAMYAKLGRLDDAKSLLVLFED---RDLVTWNSMISSFSQNERFMEALMFLRLMVLE 210
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV----FVGSSMLNLYVKCGK 126
V+PD TF L AC L L+ G+EI A+ +DV FVGS+++++Y CG+
Sbjct: 211 GVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRT---DDVIENSFVGSALVDMYCNCGQ 267
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQ 185
+ + F+ + + + W++MI G + +A+ + M+ G+ ++ M ++
Sbjct: 268 VESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVP 327
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
A +HGY I+R L + +Q +L+DMY++ G + + +F +M +IV+
Sbjct: 328 AYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVS 387
Query: 246 WGALISGFAQNGLAGSTLELLMEMQ----------------SCGFEPDSVSLVSALLACA 289
W +I+ + G + L LL EMQ F+P+S++L++ L CA
Sbjct: 388 WNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCA 447
Query: 290 QIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L GK IH Y +R + +G++++DMY+KCG + AR +FDQM R++I+WNV
Sbjct: 448 SLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNV 507
Query: 349 IIASYGIHGHGEEALSLFLQMIET-----MVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
II +YG+HG G+E+L LF M+ VKP TF +L ++ SHSG+V+EG F
Sbjct: 508 IIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHK 567
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM-STEPGLAVWVALLSGCHNHKKF 462
M +++ I+P HYAC+VDL+ RAG+VEEA +V++M S + W +LL C +
Sbjct: 568 MKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNI 627
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
IGE A+ +L+L PD + L+SN ++ W++ +R+ M+ G+KK PG S +E
Sbjct: 628 EIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEY 687
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKL 549
E+H F+ D SH Q E + L+ L
Sbjct: 688 GDEVHKFLAGDLSHPQSEKLHDFLETL 714
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 196/384 (51%), Gaps = 14/384 (3%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN--DVFVGSSMLNLYVKC 124
MI PD+ F LKA + +L +G++I + GYG+ V + ++++N+Y KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G + +A F+++ +D V W+S+I+ L + A+ A++ M EG + ++ +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 185 QACADLGDSR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
AC++L G +HG R+ + +L+ MYAK G LD A +
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++VTW ++IS F+QN L L M G +PD V+ S L AC+ + L+ GK IH
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 302 GYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
Y +R D N +G++++DMY CG R +FD + R + WN +IA Y H
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299
Query: 360 EEALSLFLQM-IETMVKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYKIQPTEKH 416
E+AL LF++M + + +T +S++ A + +EG + + V K ++
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGY---VIKRGLETNRYL 356
Query: 417 YACMVDLLARAGEVEEALKIVDSM 440
++D+ +R G+++ + +I DSM
Sbjct: 357 QNALIDMYSRMGDIKTSKRIFDSM 380
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 34/452 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + A K+F+ + R ++NSII A R E + + M+ E P
Sbjct: 53 LVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPS 112
Query: 76 SSTFTVALKACVSLMD---LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
S T AC +L L +G++I G+ F ++++ +Y K G++++A
Sbjct: 113 SFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKS 171
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+ +DLV W+SMI+ N + EA+ + M EG+ D V ++ AC+ L
Sbjct: 172 LLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDL 231
Query: 193 SRFGLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H Y++R ++ V ++LVDMY G ++ VF ++ I W A+I+
Sbjct: 232 LRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIA 291
Query: 252 GFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G+AQ+ L L +EM+ + G ++ ++ S + A + + + IHGY ++R +
Sbjct: 292 GYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLE 351
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--L 367
N L ++IDMYS+ G ++ +FD M+ RD++SWN II SY I G +AL L +
Sbjct: 352 TNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEM 411
Query: 368 QMIE--------------TMVKPDHSTFASLLSALSHSGLVEEGRYWF-----DLMVSKY 408
Q IE KP+ T ++L + + +G+ +L+ S+
Sbjct: 412 QRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQV 471
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+ + +VD+ A+ G + A ++ D M
Sbjct: 472 TVG------SALVDMYAKCGCLNLARRVFDQM 497
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 14/297 (4%)
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKT 225
M G D +++A A + + G +H + + V + +LV+MY K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 226 GHLDLASHVFKNMSRINIVTWGALISG---FAQNGLAGSTLEL-LMEMQSCGFEPDSVSL 281
G L A VF ++ + V+W ++IS F + +A L LME GFEP S +L
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLME----GFEPSSFTL 116
Query: 282 VSALLACAQI---GFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
VS LAC+ + L LGK IHG R+ + +++ MY+K G A++L
Sbjct: 117 VSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLF 176
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+ RDL++WN +I+S+ + EAL M+ VKPD TFAS+L A SH L+ G+
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + + +VD+ G+VE + DS+ + + +W A+++G
Sbjct: 237 EIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSV-LDRKIGLWNAMIAG 292
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 298/543 (54%), Gaps = 48/543 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I +Y I ARK+F+E+P R V +N+++ Y + ES + L+ DV
Sbjct: 136 VIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLF------DVM 189
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ + T W ++M+ Y K + A
Sbjct: 190 PERNVIT------------------W---------------TAMVTGYAKVKDLEAARRY 216
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M + +V W++M++G NG EA+ + M GI+ DE + +I AC+ GD
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
S+ ++ + L+ V+T+L+DMYAK G LD A +F M N+VTW ++I+G+
Sbjct: 277 CLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGY 336
Query: 254 AQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFN 311
AQNG + +EL EM + PD V++VS + AC +G L+LG + + T + +
Sbjct: 337 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLS 396
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++I MYS+CG A+ +F +M +RD++S+N +I+ + HGHG EA++L M E
Sbjct: 397 ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKE 456
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++PD TF +L+A SH+GL+EEGR F+ + P HYACMVDLL R GE+E
Sbjct: 457 GGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELE 511
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A + ++ M EP V+ +LL+ HK+ +GE A K+ +L PD+ G L+SN +A
Sbjct: 512 DAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYA 571
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W++V +R+ M+K G+KK G+S VE G+LH FI+ D+SH + +DI +L +L
Sbjct: 572 SAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRK 631
Query: 552 EMR 554
+MR
Sbjct: 632 KMR 634
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 167/382 (43%), Gaps = 75/382 (19%)
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
Y++M+ G+ D V LI++ A G G+ H + ++ D V+ +++DMYA+
Sbjct: 88 YEQMQGCGVRPDAFVYPILIKS-AGTG----GIGFHAHVLKLGHGSDAFVRNAVIDMYAR 142
Query: 225 TGHLDLASHVFKN---------------------------------MSRINIVTW----- 246
G + A VF M N++TW
Sbjct: 143 LGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVT 202
Query: 247 --------------------------GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
A++SG+AQNGLA L L EM + G EPD +
Sbjct: 203 GYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETT 262
Query: 281 LVSALLACAQIGFLKLGKS-IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
V+ + AC+ G L S + +R N + T+++DMY+K G AR LF+ M
Sbjct: 263 WVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMP 322
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVEEGR 398
R++++WN +IA Y +G A+ LF +MI + PD T S++SA H G +E G
Sbjct: 323 GRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGN 382
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG--C 456
W +++ +I+ + + M+ + +R G +E+A ++ M+T + + L+SG
Sbjct: 383 -WVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD-VVSYNTLISGFAA 440
Query: 457 HNHKKFSIGEKVAKKVLKLNPD 478
H H +I K + PD
Sbjct: 441 HGHGVEAINLMSTMKEGGIEPD 462
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 279/475 (58%), Gaps = 7/475 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS+T++ +K C+S + G I R G+ +F+ + ++N+YVK +N+A F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +++++ W++MI+ ++A++ M ++ + + ++++C + D R
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H I+ L DV V+++L+D++AK G + A VF M + + W ++I GFA
Sbjct: 180 M---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QN + LEL M+ GF + +L S L AC + L+LG H + V+ +D +L+L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-YDQDLIL 295
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY KCG A +F+QM+ RD+I+W+ +I+ +G+ +EAL LF +M +
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP++ T +L A SH+GL+E+G Y+F M Y I P +HY CM+DLL +AG++++A+
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+++ M EP W LL C + + E AKKV+ L+P+D G + L+SN +A Q
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW+ V +R MR G+KK PG S +EVN ++HAFI+ D SH Q IV V KKL
Sbjct: 476 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ---IVEVSKKL 527
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 192/348 (55%), Gaps = 18/348 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y N + A +LF+++P R V ++ ++I AYS+ + + L L M++++V
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP+ T++ L++C + D++M + ++ G +DVFV S++++++ K G+ +A+
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M D + W+S+I G N + A++ +KRMK+ G A++ + +++AC L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ H + ++ + D+ + +LVDMY K G L+ A VF M +++TW +ISG
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGYTV 305
AQNG + L+L M+S G +P+ +++V L AC+ G L+ G K ++G
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
R + +ID+ K G A L ++M+ D ++W ++ +
Sbjct: 394 VREHYG-----CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 305/572 (53%), Gaps = 54/572 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M+KTN + + + I+ N + A + ++ + V YN++I + + P +
Sbjct: 5 MVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQA 64
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE----EIWRKAVELGYGNDVFVGSS 116
L LY QM++ +V P S TF +KAC + L+ E +WR G+ + VFV +S
Sbjct: 65 LELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRN----GFDSHVFVQTS 120
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+++ Y G++ E++ F++M +D+ W++M++GLV G A + M
Sbjct: 121 LVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDR----- 175
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++ +L+D YA+ +D+A +F
Sbjct: 176 ----------------------------------NLATWNTLIDGYARLREVDVAELLFN 201
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M +I++W +I+ ++QN L + EM G PD V++ + + ACA +G L L
Sbjct: 202 QMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDL 261
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GK IH Y ++ F+ ++ +G+++IDMY+KCG + +F +++ ++L WN +I +
Sbjct: 262 GKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAV 321
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HG+ EEAL++F +M +KP+ TF S+LSA +H+GL+EEGR F M + I P +
Sbjct: 322 HGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVE 381
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVDLL++AG +EEAL+++ +M EP +W ALLSGC H+ I + A K++ L
Sbjct: 382 HYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVL 441
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-KKVPGYSVVEVNGELHAFIMEDK 534
P + G + L+ N A +W E A +R TM++ G+ K+ PG S +E+ ++H F DK
Sbjct: 442 EPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDK 501
Query: 535 SHNQYEDIVYVLKKLYLEMRAISSWLQGHMEE 566
SH ++I +L +L +M+ L G++ E
Sbjct: 502 SHAASDEIYSLLAELDGQMK-----LAGYVPE 528
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 286/523 (54%), Gaps = 10/523 (1%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE 104
N II Y P+ + +Y ++ PD T LK+C + ++I AV+
Sbjct: 153 NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVK 212
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
D+FV +S +++Y CG A F+ M +D+V W+ +I+G + G +AV
Sbjct: 213 TDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVAL 272
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ RM + + + ++ AC LG G +HG + ++ V +L+DMY K
Sbjct: 273 FLRMD---VAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVK 329
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
+ A +F + +IV+W ++ISG Q +L+L EM GFEPD V L S
Sbjct: 330 CESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSV 389
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L ACA +G L G+ +H Y R +++ +GTS+IDMY+KCG A+ +F+ + S+++
Sbjct: 390 LSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNI 449
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+WN I I+GHG+EAL F ++E+ +P+ TF ++ SA HSGLV+EGR +F
Sbjct: 450 RTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQ 509
Query: 404 MVSK-YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M S Y + P +HY CMVDLL RA VEEA+++++ M P + + ALLS +
Sbjct: 510 MTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNV 569
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ ++ K V + G++ L+SN++A +KW EV VR+ M++ G+ K PG S++ V
Sbjct: 570 ELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRV 629
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHME 565
+G+ H F++ D +H Q EDI + L + A ++L+GH++
Sbjct: 630 DGKSHKFVVGDNNHPQSEDI-----HVLLNILANQTYLEGHID 667
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 159/302 (52%), Gaps = 11/302 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT+L + +Y D V A K+F+ +P+R V ++ +I Y +
Sbjct: 211 VKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKA------- 263
Query: 62 GLYNQ----MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
GL+N ++ DV P+++TF L AC L L +G+ I + +G ++ V +++
Sbjct: 264 GLFNDAVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTL 323
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++YVKC + +A F+++ KD+V W+SMI+GLV P+E++D + M G + D
Sbjct: 324 MDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDG 383
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V++ ++ ACA LG +G VH Y + DV + TSL+DMYAK G +++A +F
Sbjct: 384 VILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNL 443
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ NI TW A I G A NG L+ + G P+ ++ ++ AC G + G
Sbjct: 444 LPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEG 503
Query: 298 KS 299
+S
Sbjct: 504 RS 505
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 308/561 (54%), Gaps = 10/561 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK++ + ++ +Y + +A K F P + ++N++I +Y++ E
Sbjct: 920 VIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEA 979
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMD---LKMGEEIWRKAVELGYGNDVFVGSSM 117
+ + ++++ ++PD T L+AC + + +G ++ A++ G ND FV +++
Sbjct: 980 ICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
++LY K GKM+EA DL W++++ G + + + R+A++ + M + GI DE
Sbjct: 1040 IDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDE 1099
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ + I+A L + + G + Y+I+ N D+ V + ++DMY K G + A +F
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGE 1159
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+SR + V W +ISG+ +NG L + M+ G +PD + + + A + + L+ G
Sbjct: 1160 ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQG 1219
Query: 298 KSIHGYTVRRFDFNL--VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
K IH V+ D++L +GTS++DMY KCG A +F +M R ++ WN ++
Sbjct: 1220 KQIHANVVK-LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HGH +EAL+LF M ++PD TF +LSA SHSGL E +FD M Y I P +
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIE 1338
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY+C+VD L RAG ++EA ++ SM + +++ ALL C ++VA K+L L
Sbjct: 1339 HYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLAL 1398
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
+P D + L+SN +A ++W++V R M+ +KK PG+S ++V ++H F+++D+S
Sbjct: 1399 DPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRS 1458
Query: 536 HNQ----YEDIVYVLKKLYLE 552
H Q YE I ++K++ E
Sbjct: 1459 HPQASLIYEKIEDLMKRIREE 1479
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 215/427 (50%), Gaps = 17/427 (3%)
Query: 46 SIIIAYSRKESPF-------EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
S I A+++K + F + + +++ + DS T + L A V DL +GE+I
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI 916
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
++ + V V +S++N+Y K G + A F DL+ W++MI+ N
Sbjct: 917 HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLE 976
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF---GLSVHGYSIRRHLNLDVKVQ 215
EA+ ++ + ++G+ D+ + +++AC+ + + G VH Y+I+ + D V
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
T+L+D+Y+K G +D A + ++ +W A++ G+ ++ + LE M G
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
D ++L +A+ A + LK GK I Y ++ F+ +L + + V+DMY KCG A L
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F ++ D ++W +I+ Y +G + ALS++ M + V+PD TFA+L+ A S +
Sbjct: 1157 FGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTAL 1216
Query: 395 EEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
E+G+ + + K+ + H+ +VD+ + G V++A ++ M + W A+
Sbjct: 1217 EQGK---QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAM 1272
Query: 453 LSGCHNH 459
L G H
Sbjct: 1273 LLGLAQH 1279
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 190/450 (42%), Gaps = 39/450 (8%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y + AR LF+++P R +N ++ AY E L ++ +
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFX 815
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD S CV +G G +DV VK AM
Sbjct: 816 PDFSNLH-----CV------IG----------GVNSDVSNNRKRHAEQVKA----YAMKM 850
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F Q ++ W+ + + GQ A+D +K + + I D V ++ ++ A D
Sbjct: 851 FPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H I+ V V SL++MY+K G + A F N +++++W +IS +
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSY 970
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA---QIGFLKLGKSIHGYTVRRFDF 310
AQN L + ++ G +PD +L S L AC+ + + LG +H Y ++
Sbjct: 971 AQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030
Query: 311 N-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N + T++ID+YSK G A L DL SWN I+ Y +AL F M
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH----YACMVDLLA 425
E + D T A+ + A +++G+ + Y I+ + + ++D+
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGK-----QIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G++ AL++ +S P W ++SG
Sbjct: 1146 KCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 206/452 (45%), Gaps = 42/452 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAY-----SRKESPFEVLGLYNQMIKE 70
+I +Y + SAR++F++ R + T+NSI+ AY S E+ E L+ + +
Sbjct: 652 LITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREF 711
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
T LK C+ +++ E + AV++G+ D+FV +++N+Y K G + +A
Sbjct: 712 GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQA 771
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC-AD 189
+ F+KM +D V W+ M+ V N EA+ + + G D + +I +D
Sbjct: 772 RLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSD 831
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ ++R +RH +V+ + M+ D S++F W
Sbjct: 832 VSNNR----------KRHAE---QVKAYAMKMFP----FDQGSNIF---------AWNKK 865
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
++ F G + ++ + DSV+LV L A L LG+ IH ++ F
Sbjct: 866 LTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSF 925
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + S+++MYSK GV A F DLISWN +I+SY + EA+ F
Sbjct: 926 APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRD 985
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYW-FDLMVSKYKIQ----PTEKHYACMVDL 423
++ +KPD T AS+L A S +EG Y+ V Y I+ ++DL
Sbjct: 986 LLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ G+++EA ++ + LA W A++ G
Sbjct: 1043 YSKGGKMDEAEFLLHG-KYDFDLASWNAIMFG 1073
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 158/379 (41%), Gaps = 37/379 (9%)
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
++ +++ DLK+G+ + V G D ++ ++++ +Y KCG + A F+K +DLV
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 144 CWSSMINGLV-FNGQPREAV----DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
W+S++ F E V + +++ G + + L++ C G + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VHGY+++ LD+ V +LV++Y K G + A +F M + V W ++ + +N
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 259 AGSTLELLMEMQSCGFEPDSVSL---VSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
L GF PD +L + + + + + + Y ++ F F+
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFD---- 854
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
Q ++ +WN + + G A+ F ++ + +
Sbjct: 855 -----------------------QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
D T +LSA + ++ G L++ K P ++++ ++AG V A K
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVI-KSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950
Query: 436 IVDSMSTEPGLAVWVALLS 454
+ S E L W ++S
Sbjct: 951 TFIN-SPELDLISWNTMIS 968
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 308/561 (54%), Gaps = 10/561 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK++ + ++ +Y + +A K F P + ++N++I +Y++ E
Sbjct: 920 VIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEA 979
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMD---LKMGEEIWRKAVELGYGNDVFVGSSM 117
+ + ++++ ++PD T L+AC + + +G ++ A++ G ND FV +++
Sbjct: 980 ICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
++LY K GKM+EA DL W++++ G + + + R+A++ + M + GI DE
Sbjct: 1040 IDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDE 1099
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ + I+A L + + G + Y+I+ N D+ V + ++DMY K G + A +F
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGE 1159
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+SR + V W +ISG+ +NG L + M+ G +PD + + + A + + L+ G
Sbjct: 1160 ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQG 1219
Query: 298 KSIHGYTVRRFDFNL--VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
K IH V+ D++L +GTS++DMY KCG A +F +M R ++ WN ++
Sbjct: 1220 KQIHANVVK-LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HGH +EAL+LF M ++PD TF +LSA SHSGL E +FD M Y I P +
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIE 1338
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY+C+VD L RAG ++EA ++ SM + +++ ALL C ++VA K+L L
Sbjct: 1339 HYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLAL 1398
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
+P D + L+SN +A ++W++V R M+ +KK PG+S ++V ++H F+++D+S
Sbjct: 1399 DPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRS 1458
Query: 536 HNQ----YEDIVYVLKKLYLE 552
H Q YE I ++K++ E
Sbjct: 1459 HPQASLIYEKIEDLMKRIREE 1479
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 215/427 (50%), Gaps = 17/427 (3%)
Query: 46 SIIIAYSRKESPF-------EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
S I A+++K + F + + +++ + DS T + L A V DL +GE+I
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI 916
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
++ + V V +S++N+Y K G + A F DL+ W++MI+ N
Sbjct: 917 HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLE 976
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF---GLSVHGYSIRRHLNLDVKVQ 215
EA+ ++ + ++G+ D+ + +++AC+ + + G VH Y+I+ + D V
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
T+L+D+Y+K G +D A + ++ +W A++ G+ ++ + LE M G
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
D ++L +A+ A + LK GK I Y ++ F+ +L + + V+DMY KCG A L
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
F ++ D ++W +I+ Y +G + ALS++ M + V+PD TFA+L+ A S +
Sbjct: 1157 FGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTAL 1216
Query: 395 EEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
E+G+ + + K+ + H+ +VD+ + G V++A ++ M + W A+
Sbjct: 1217 EQGK---QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAM 1272
Query: 453 LSGCHNH 459
L G H
Sbjct: 1273 LLGLAQH 1279
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 190/450 (42%), Gaps = 39/450 (8%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y + AR LF+++P R +N ++ AY E L ++ +
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFF 815
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD S CV +G G +DV VK AM
Sbjct: 816 PDFSNLH-----CV------IG----------GVNSDVSNNRKRHAEQVKA----YAMKM 850
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F Q ++ W+ + + GQ A+D +K + + I D V ++ ++ A D
Sbjct: 851 FPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H I+ V V SL++MY+K G + A F N +++++W +IS +
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSY 970
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA---QIGFLKLGKSIHGYTVRRFDF 310
AQN L + ++ G +PD +L S L AC+ + + LG +H Y ++
Sbjct: 971 AQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030
Query: 311 N-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N + T++ID+YSK G A L DL SWN I+ Y +AL F M
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH----YACMVDLLA 425
E + D T A+ + A +++G+ + Y I+ + + ++D+
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGK-----QIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G++ AL++ +S P W ++SG
Sbjct: 1146 KCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 206/455 (45%), Gaps = 42/455 (9%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAY-----SRKESPFEVLGLYNQM 67
+I +Y + SAR++F++ R + T+NSI+ AY S E+ E L+ +
Sbjct: 649 TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ T LK C+ +++ E + AV++G+ D+FV +++N+Y K G +
Sbjct: 709 REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLV 768
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+A + F+KM +D V W+ M+ V N EA+ + + G D + +I
Sbjct: 769 GQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGV 828
Query: 188 -ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+D+ ++R +RH +V+ + M+ D S++F W
Sbjct: 829 NSDVSNNR----------KRHAE---QVKAYAMKMFP----FDQGSNIF---------AW 862
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++ F G + ++ + DSV+LV L A L LG+ IH ++
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F + + S+++MYSK GV A F DLISWN +I+SY + EA+
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW-FDLMVSKYKIQ----PTEKHYACM 420
F ++ +KPD T AS+L A S +EG Y+ V Y I+ +
Sbjct: 983 FRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+DL ++ G+++EA ++ + LA W A++ G
Sbjct: 1040 IDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIMFG 1073
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 158/379 (41%), Gaps = 37/379 (9%)
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
++ +++ DLK+G+ + V G D ++ ++++ +Y KCG + A F+K +DLV
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 144 CWSSMINGLV-FNGQPREAV----DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
W+S++ F E V + +++ G + + L++ C G + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VHGY+++ LD+ V +LV++Y K G + A +F M + V W ++ + +N
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 259 AGSTLELLMEMQSCGFEPDSVSL---VSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
L GF PD +L + + + + + + Y ++ F F+
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFD---- 854
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
Q ++ +WN + + G A+ F ++ + +
Sbjct: 855 -----------------------QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
D T +LSA + ++ G L++ K P ++++ ++AG V A K
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVI-KSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950
Query: 436 IVDSMSTEPGLAVWVALLS 454
+ S E L W ++S
Sbjct: 951 TFIN-SPELDLISWNTMIS 968
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 306/552 (55%), Gaps = 5/552 (0%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+T+ ++ + + ++ LY + AR LF+ +PLR V ++N ++ Y + EVL
Sbjct: 43 QTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLV 102
Query: 63 LYNQMIK-EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M+ ++ P+ FT AL AC +K G + + G +V S+++++Y
Sbjct: 103 LFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMY 162
Query: 122 VKCGKMNEAMVAFEKM---QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+C + A+ + + D+ ++S++N LV +G+ EAV+ +RM E + D V
Sbjct: 163 SRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHV 222
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+G++ CA + D + GL VH +R L D V + L+DMY K G + A +VF +
Sbjct: 223 TYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGL 282
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+V W AL++ + QNG +L L M G P+ + L ACA I L+ G
Sbjct: 283 QNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGD 342
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + F ++++ ++I+MYSK G + +F M RD+I+WN +I Y HG
Sbjct: 343 LLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHG 402
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
G++AL +F M+ P++ TF +LSA SH GLV+EG Y+ + ++ +KI+P +HY
Sbjct: 403 LGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHY 462
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CMV LL+RAG ++EA + + + + W LL+ CH H+ + +G ++A+ VL+++P
Sbjct: 463 TCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDP 522
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
D+G + L+SN +A ++W+ V +RK MR+ +KK PG S +++ ++H F+ E +H
Sbjct: 523 HDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHP 582
Query: 538 QYEDIVYVLKKL 549
+ I +++L
Sbjct: 583 ESIQIYKKVQQL 594
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFN---LVLGTSVIDMYSKCGVPS 329
+ P L L CA + +L GK++H + +R N + S++ +Y KCG
Sbjct: 8 YLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLG 67
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSAL 388
AR LFD M R+++SWNV++A Y G+ E L LF M+ P+ F + LSA
Sbjct: 68 LARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSAC 127
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
SH G V+EG L+ K+ + + + +V + +R VE AL+++D++ E
Sbjct: 128 SHGGRVKEGMQCHGLLF-KFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGE 181
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 291/514 (56%), Gaps = 4/514 (0%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMI--KEDVRPDSSTFTVALKACVSLMDLKMGE 96
+ V ++N++I A+S + E L +M E+++ + T L AC+ + L+ +
Sbjct: 312 KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLK 371
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG 156
E+ + + V + ++ + Y KCG +N A F + K + W+++I G NG
Sbjct: 372 ELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNG 430
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
PR+A+ +M G D + L+ ACA L ++G +HGY +R L D V T
Sbjct: 431 DPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGT 490
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
SL+ Y G A +F M N+V+W A+ISG++QNGL +L L + S G +
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALF 335
+++VS AC+Q+ L+LGK HGY ++ + +G S+IDMY+K G +R +F
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVF 610
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D ++ +++ SWN II ++GIHGHG+EA+ L+ +M + PD T+ +L A H+GLVE
Sbjct: 611 DGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVE 670
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG +F M + I+P +HYAC++D+LARAG +++AL++V+ M E +W +LL
Sbjct: 671 EGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRS 730
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C IGEKVAKK+L+L PD + L+SN +A KW+ V VR+ M++ G++K
Sbjct: 731 CRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDA 790
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
G S +EV G +++F++ D + +I + ++L
Sbjct: 791 GCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRL 824
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 238/449 (53%), Gaps = 14/449 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVR 73
R+I +Y + +R +F+ + + + +N+++ Y+R +V+ ++ ++ + D +
Sbjct: 84 RLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQ 143
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ TF +KAC ++D+++GE I +++G DVFVG++++ +Y KCG ++EAM
Sbjct: 144 PDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKV 203
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGD 192
F+ M +LV W+SMI NG R++ D M +EG+ D V ++ ++ CA G+
Sbjct: 204 FDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGE 263
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +HG +++ L+ +V V ++V MY+K G+L+ A F + N+V+W +IS
Sbjct: 264 VDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISA 323
Query: 253 FAQNGLAGSTLELLMEMQSCGFE--PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
F+ G LL EMQ G E + V++++ L AC L+ K +HGY+ R
Sbjct: 324 FSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ 383
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ L + I Y+KCG + A +F + + + SWN +I + +G +AL L QM
Sbjct: 384 HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYACMVDLLA---R 426
+ +PD T +SLL A +H ++ G+ + Y ++ E + LL+
Sbjct: 444 YSGQQPDWFTISSLLLACAHLKSLQYGKE-----IHGYVLRNGLETDFFVGTSLLSHYIH 498
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSG 455
G+ A + D M + L W A++SG
Sbjct: 499 CGKASSARVLFDRMK-DKNLVSWNAMISG 526
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 197/383 (51%), Gaps = 17/383 (4%)
Query: 83 LKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
L+AC + D++ G + + + Y ND + + ++ +Y CG ++ + F+ M+ K+
Sbjct: 50 LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVH 200
L+ W+++++G NG + V + + + D +I+AC + D R G +H
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G I+ L LDV V +LV MY K G +D A VF M N+V+W ++I F++NG +
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229
Query: 261 STLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSV 318
+ +LLMEM G PD V++V+ L CA G + +G IHG V+ +++ ++
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAM 289
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--LQMIETMVKP 376
+ MYSKCG + A+ F + +++++SWN +I+++ + G EA +L +Q+ +K
Sbjct: 290 VYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKA 349
Query: 377 DHSTFASLLSA----LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ T ++L A L L E Y F ++ Q E A ++ A+ G +
Sbjct: 350 NEVTILNVLPACLDKLQLRSLKELHGYSF-----RHCFQHVELSNAFIL-AYAKCGALNS 403
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A K+ + + ++ W AL+ G
Sbjct: 404 AEKVFHGIGDKT-VSSWNALIGG 425
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 119/219 (54%), Gaps = 4/219 (1%)
Query: 183 LIQACADLGDSRFGLSVHGY-SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+QAC + D G +H + S H D + T L+ MYA G + VF NM
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N++ W AL+SG+ +NGL G +++ M++ S F+PD+ + S + AC I ++LG+ I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG ++ ++ +G +++ MY KCG A +FD M +L+SWN +I ++ +G
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 360 EEALSLFLQMI-ETMVKPDHSTFASLLSALSHSGLVEEG 397
++ L ++M+ E + PD T ++L + G V+ G
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIG 267
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 279/476 (58%), Gaps = 4/476 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ F +L +C +L ++ ++ + G ++ V + +L +YV+ G + +A F
Sbjct: 52 DTKRFRSSLLSCRNLFQVR---QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELF 108
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M ++ WS ++ G G ++ + + G D+ +I+AC DL D +
Sbjct: 109 DGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLK 168
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H +++ L+ V +LVDMYA+ ++ A +F M + ++ TW +I A
Sbjct: 169 CGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALA 228
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLV 313
++G+ +L M++ G PD V+LV+ + ACA++G + K+IH Y + +++
Sbjct: 229 ESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVI 288
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
LGT++IDMY+KCG AR +FD+MQ R++I+W+ +IA+YG HG GE+AL LF M+ +
Sbjct: 289 LGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSG 348
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ P+ TF SLL A SH+GL+EEG+ +F M +Y + P KHY CMVDLL RAG ++EA
Sbjct: 349 ILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEA 408
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L++++ M E +W ALL C H+ + E+VA+ +LKL G + L+SN +A
Sbjct: 409 LEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANA 468
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KWE++A R M K G++K+PG + +EV +L+ F + DK+H + +I +LK+L
Sbjct: 469 GKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRL 524
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 45/437 (10%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ +Y + + A++LF+ + R +++ I+ Y++ + F ++ ++++
Sbjct: 90 KLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPL 149
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D + V ++AC L DLK G I ++ G FV ++++++Y +C + +A F
Sbjct: 150 DDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIF 209
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
KM ++DL W+ MI L +G P E++ + RM+ +GI D+V ++ ++ ACA LG
Sbjct: 210 VKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMN 269
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
++H Y +LDV + T+++DMYAK G ++ A +F M N++TW A+I+ +
Sbjct: 270 KAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYG 329
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G LEL M G P+ ++ VS L AC+ G ++ G+ RF
Sbjct: 330 YHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQ--------RF------ 375
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM- 373
M+ + GV + D+ + ++ G G +EA L+MIE M
Sbjct: 376 ---FSSMWDEYGV------------TPDVKHYTCMVDLLGRAGRLDEA----LEMIEGMP 416
Query: 374 VKPDHSTFASLLSAL---SHSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGE 429
V+ D + +LL A H L E + S K+Q + HY + ++ A AG+
Sbjct: 417 VEKDEVLWGALLGACRIHRHLDLAER------VARSLLKLQSQKPGHYVLLSNIYANAGK 470
Query: 430 VEEALKIVDSMSTEPGL 446
E+ K D M T+ GL
Sbjct: 471 WEDMAKTRDLM-TKGGL 486
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 293/542 (54%), Gaps = 10/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG-LYNQMIKEDVRP 74
+I +Y + +A+++F+ + V Y S+I A+ R FE+ QM+K+ ++P
Sbjct: 82 LIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN-GEFELAAEALIQMLKQGLKP 140
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ T T L AC ++ ++ + +K +G V+ +++++ Y + G+ A
Sbjct: 141 NEHTMTTILTACPRVLGQQIHGYLIKK---IGLRSQSVYSSTALIDFYSRNGEFKLAKAV 197
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + K++V W SM+ + +G+ EA+ + M EG+D +E + ++ AC +G
Sbjct: 198 FDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG-- 255
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +I+ L D++V +L+ MY +TG ++ + + ++V+W IS
Sbjct: 256 -LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISAN 314
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG + LL +M S GF P+ + S L +CA + L G H ++ D +
Sbjct: 315 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 374
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
G ++I+MYSKCG AR FD M + D+ SWN +I + HG +AL +F +M
Sbjct: 375 CTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSN 434
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD STF +L +HSG+VEEG +F LM+ +Y P HYACM+D+L R G +E
Sbjct: 435 GIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDE 494
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL++++ M EP +W LL+ C H+ IG+ A ++++L+ D + L+SN +AM
Sbjct: 495 ALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAM 554
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+WE+ VR+ M ++G+KK G S +E+N E+H F D SH + I +L +L
Sbjct: 555 HGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAV 614
Query: 553 MR 554
M+
Sbjct: 615 MQ 616
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 227/449 (50%), Gaps = 14/449 (3%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
+P + V + S++ Y+R P L ++ M++ V P+ AL AC L L+ G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
E++ AV G+ D ++GS ++ +Y +CG + A F++M D+V ++S+I+ N
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR--HLNLDVK 213
G+ A +A +M K+G+ +E M ++ AC + G +HGY I++ + V
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVY 176
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
T+L+D Y++ G LA VF ++ N+V+W +++ + ++G L++ +M S G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+P+ +L L AC IG LG+ +H ++ ++ + +++ MY + G+
Sbjct: 237 VDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 293
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
A+ +++++ DL+SW I++ +G GE+A++L QM P+ F+S+LS+ +
Sbjct: 294 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 353
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+++G F + K ++++ ++ G++ A D M T + W +L
Sbjct: 354 SLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH-DVTSWNSL 411
Query: 453 LSGCHNHKKFSIGEKVAKKVLK--LNPDD 479
+ G H + +V K+ + PDD
Sbjct: 412 IHGHAQHGDANKALEVFSKMRSNGIKPDD 440
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 296/540 (54%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y SA + F+++ + + ++++II AY+ + E + L+ +M+ + P+
Sbjct: 132 ILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPN 191
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
SS F+ + + L +G++I + + +G+ ++ + + + N+YVKCG ++ A VA
Sbjct: 192 SSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATN 251
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM RK+ V + ++ G + R+A+ + +M EG++ D V +++ACA LGD
Sbjct: 252 KMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYT 311
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y I+ L +V V T LVD Y K + A F+++ N +W ALI+G+ Q
Sbjct: 312 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQ 371
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G LE+ ++S G +S + AC+ + L G IH +++ + G
Sbjct: 372 SGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG 431
Query: 316 TS-VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S +I MYSKCG A F + D ++W II ++ HG EAL LF +M + V
Sbjct: 432 ESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGV 491
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF LL+A SHSGLV+EG+ D M +Y + PT HY CM+D+ +RAG ++EAL
Sbjct: 492 RPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEAL 551
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ S+ EP + W +LL GC +H+ IG A + +L+P D + ++ N +A+
Sbjct: 552 EVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAG 611
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW+E A RK M + ++K S + V G++H F++ D+ H Q E I LK+L +
Sbjct: 612 KWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFK 671
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 200/479 (41%), Gaps = 39/479 (8%)
Query: 48 IIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY 107
+I+ +++ + EV M K + + ++ K C +L L G+ + +
Sbjct: 64 LISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN 123
Query: 108 GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
N F+ + +L +Y C A F+K+ +DL WS++I+ G+ EAV + R
Sbjct: 124 SNK-FIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLR 182
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M GI + + LI + D G +H IR ++ ++T + +MY K G
Sbjct: 183 MLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGW 242
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD A M+R N V L+ G+ + L L +M S G E D L A
Sbjct: 243 LDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKA 302
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
CA +G L GK IH Y ++ + + +GT ++D Y KC AR F+ + + SW
Sbjct: 303 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 362
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVE 395
+ +IA Y G + AL +F + V + + ++ A S H+ ++
Sbjct: 363 SALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIK 422
Query: 396 EGRYWF----DLMVSKYKI---------------QPTEKHYACMVDLLARAGEVEEALKI 436
+G + M+S Y +P + ++ A G+ EAL++
Sbjct: 423 KGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRL 482
Query: 437 VDSMS---TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
M P ++ LL+ C +H K KK+L D+ G++ + ++ M
Sbjct: 483 FKEMQGSGVRPNAVTFIGLLNAC-SHSGLV---KEGKKILDSMSDEYGVNPTIDHYNCM 537
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L AY + +I++Y + A + F + + +II A++ FE L
Sbjct: 421 IKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEAL 480
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRK-AVELGYGNDVFVGSSMLNL 120
L+ +M VRP++ TF L AC +K G++I + E G + + M+++
Sbjct: 481 RLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDV 540
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
Y + G + EA+ + D++ W S++ G
Sbjct: 541 YSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 268/471 (56%), Gaps = 3/471 (0%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMV 132
PD + ++ LK C L ++ G + V+ + N + + + ++N+Y KCG +++A
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M KD+V W+++I G N +PR+A+ + +M + G+ + + L++A
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + ++ V V ++LVDMYA+ GH+D A F M + V+W ALISG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
A+ G L LL +MQ F+P + S ACA IG L+ GK +H + ++
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI 324
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G +++DMY+K G A+ +FD++ D++SWN ++ HG G+E L F QM+
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++P+ +F +L+A SHSGL++EG Y+F+LM KYK++P HY VDLL R G ++
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLD 443
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A + + M EP AVW ALL C HK +G A++ +L+P D G L+SN +A
Sbjct: 444 RAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+W +VA VRK M++SG+KK P S VE+ +H F+ D++H Q ++I
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEI 554
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 156/282 (55%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + AR++F+E+P + + T+ ++I +S+ P + L L+ QM++ ++P+
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPN 188
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + LKA S L G ++ ++ GY + V+VGS+++++Y +CG M+ A +AF+
Sbjct: 189 HFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFD 248
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M K V W+++I+G G+ A+ +M+++ + ACA +G
Sbjct: 249 GMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQ 308
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L L + +L+DMYAK G +D A VF + + ++V+W +++G AQ
Sbjct: 309 GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+GL TL+ +M G EP+ +S + L AC+ G L G
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + +A+ F+ +P + ++N++I ++RK L L +M +++ +P
Sbjct: 230 LVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPT 289
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T++ AC S+ L+ G+ + ++ G F+G+++L++Y K G +++A F+
Sbjct: 290 HFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFD 349
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + D+V W++M+ G +G +E +D +++M + GI+ +E+ + ++ AC+ G
Sbjct: 350 RLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDE 409
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
GL + + DV + VD+ + G LD A + M WGAL+
Sbjct: 410 GLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 133/266 (50%), Gaps = 23/266 (8%)
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLA-CAQIGFLKLGKSIHGYTVRR--FDFNLVLG 315
G+ L L +Q PD +L S LL C ++G ++ G+ +H + V D +LVL
Sbjct: 68 GGTGLYALDLIQRGSLVPD-YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQ 126
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++MY+KCG AR +FD+M ++D+++W +IA + + +AL LF QM+ ++
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQ 186
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
P+H T +SLL A ++ G + KY Q + + +VD+ AR G ++ A
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCL-KYGYQSSVYVGSALVDMYARCGHMDAAQL 245
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL-GIHALVSNFF---- 490
D M T+ ++ W AL+SG H + GE + K+ + H S+ F
Sbjct: 246 AFDGMPTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACA 301
Query: 491 ---AMEQ-KWEEVAGVRKTMRKSGMK 512
A+EQ KW V M KSG+K
Sbjct: 302 SIGALEQGKW-----VHAHMIKSGLK 322
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 288/540 (53%), Gaps = 8/540 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + +A ++F + V Y S++ A R + + QM ++ ++P+
Sbjct: 177 LIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPN 236
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L C +GE+I +++ V+ +++++ Y + G A FE
Sbjct: 237 EHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFE 292
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ K++V W SM+ + +G+ +A+ + M EG+ +E + AC G
Sbjct: 293 NLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCL 349
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+R L D++V +L+ MY ++G + V + ++V+W A IS Q
Sbjct: 350 GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQ 409
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG + + LL++M S GF P+ + S L +CA + L G+ +H ++ DF +
Sbjct: 410 NGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCT 469
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG AR FD M + D++SWN +I HG AL F +M +
Sbjct: 470 GNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDW 529
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD STF S+L +H+GLV+EG +F M +Y + PT HYACM+D+L R G EAL
Sbjct: 530 RPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEAL 589
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++++M EP + +W LL+ C H+ IG+ A K+++L+ D + L+SN +AM +
Sbjct: 590 RMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHE 649
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W + VR+ M + G+KK G+S +EV E++ F+ D SH I +L +L + M+
Sbjct: 650 EWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQMLAELLVVMQ 709
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 226/457 (49%), Gaps = 18/457 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+ +P + V + + I +R P ++ M++ V P+ AL AC +
Sbjct: 89 ALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAA 148
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +GE++ AV G+ D ++GS ++ LY +CG + A F +M+ D+V ++S+
Sbjct: 149 AGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSL 208
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++ L NG+ AVD +M ++G+ +E M ++ C G +HGY ++
Sbjct: 209 VSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHGYMLKVMG 264
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ V T+L+D Y++ G A VF+N+ N+V+W +++ ++G L + E
Sbjct: 265 SQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSE 324
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M S G +P+ + AL AC G + LG+ IH ++R ++ + +++ MY + G
Sbjct: 325 MISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGF 381
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S A+ ++++ DL+SW I++ +G E+A++L LQM P+ F+S LS+
Sbjct: 382 VSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSS 441
Query: 388 LSHSGLVEEGRYWFDLMV---SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
+ L+ +GR L + +K+ ++++ ++ G + A D M T
Sbjct: 442 CADLALLHQGRQLHCLALKLGCDFKVCTGNA----LINMYSKCGRIGSARLAFDVMDTHD 497
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDD 479
++ W +L+ G H ++ + ++ + PDD
Sbjct: 498 VMS-WNSLIHGLAQHGDANLALETFSEMCSSDWRPDD 533
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 173/347 (49%), Gaps = 10/347 (2%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + L+ +K G++ +A+ F++M RK++V W++ I+G NG+P A + M
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ ++ + ACA G G VH ++R D + + L+++Y++ G L
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF+ M ++V + +L+S +NG +++L +M G +P+ ++ S L C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 290 QIGFLKLGKSIHGYTVRRFDFNLVLG-TSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ +G+ IHGY ++ V T++ID YS+ G A+ +F+ ++S++++SW
Sbjct: 249 R----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCS 304
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
++ G ++AL +F +MI V+P+ F+ LSA G V GR K
Sbjct: 305 MMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSA---CGSVCLGRQ-IHCSAIKR 360
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + ++ + R+G V E L+ V P L W A +S
Sbjct: 361 DLMTDIRVSNALLSMYGRSGFVSE-LEAVLGKIENPDLVSWTAAISA 406
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 270/473 (57%), Gaps = 2/473 (0%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+T L++CV+ L G ++ + + G G D + + +++LY CG + A F+ M
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++++ W+ +I +G A+ Y+ M G++ D ++ACA L D G
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH + H D+ V LVDMYAK G +D A VF + + V W ++I+ + QNG
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L L +M + G P +LVS + A A L G+ +HG+ RR FD L TS
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKP 376
++DMY+K G AR LF+Q+ R+L+SWN +I YG+HGH +EAL LF +M +E V P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D+ TF +LSA +H G+V+E + +F LMV Y I+PT +H+ C+VD+L AG EEA +
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKW 496
+ M +P +W ALL+GC HK +GE +K+++L P+D G + L+SN +A KW
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKW 484
Query: 497 EEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
E+ A VRK M G+KK+ G S +E+ G+ H F++ D SH + +I L++L
Sbjct: 485 EKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERL 537
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 205/398 (51%), Gaps = 7/398 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV-LGLYNQMIKEDVR 73
+++ LY + AR+LF+ +P R V +N +I AY+R + P EV + LY M+ V
Sbjct: 102 KLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYAR-DGPHEVAIQLYRGMVDYGVE 160
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T+ +ALKAC +L+DL+ G E+ + + +G D+FV + ++++Y KCG +++A
Sbjct: 161 PDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAV 220
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++++ +D V W+SMI NG+P EA+ + M G+ ++ I A AD
Sbjct: 221 FDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAAL 280
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG+ RR + K++TSLVDMYAK+G + +A +F+ + + +V+W A+I G+
Sbjct: 281 PRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY 340
Query: 254 AQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+G L+L +M+ PD+++ V L AC G +K K G V +
Sbjct: 341 GMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKP 400
Query: 313 VLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQM 369
+ T ++D+ G A L M + D W ++ IH + E L LQ
Sbjct: 401 TVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELG-ELALQK 459
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+ + D + L + + SG E+ LM ++
Sbjct: 460 LIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNR 497
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 317/554 (57%), Gaps = 5/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ A + ++++Y D+ AR+LF+E+ + V ++ +I Y + E P
Sbjct: 175 LIKSGFWAISSVQNSLLSMYVDA-DMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVG 233
Query: 61 LGLYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L ++ +M+ + PD LKAC S D+ G + + G+ D+FV +S+++
Sbjct: 234 LQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLID 293
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KC A F ++ +++ V W+SM++G V N EA M+KE ++ DEV
Sbjct: 294 MYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVT 353
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++Q C S+H IRR + V ++L+D YAK +++A VF M
Sbjct: 354 LVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMR 413
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
R ++V+W +ISGFA G + + EM +P+ +++++ L AC+ LK K
Sbjct: 414 RRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKW 473
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
HG +R+ F + +GT+V+DMYSKCG +R FDQ+ +++++W+ +IA+YG++G
Sbjct: 474 AHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGL 533
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EAL+LF +M +KP+ T S+L+A SH GLVEEG F MV + ++P +HY+
Sbjct: 534 AHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYS 593
Query: 419 CMVDLLARAGEVEEALKIVDSM--STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
CMVD+L RAG+++ A++++ +M + + G ++W +LLS C ++ +G++ +VL+L
Sbjct: 594 CMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELE 653
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + + + S+ +A + W++ A +R ++ G+K V GYS+V ++ + F+ D SH
Sbjct: 654 PSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSH 713
Query: 537 NQYEDIVYVLKKLY 550
+ ++I + ++L+
Sbjct: 714 PRSDEIFSMAQQLH 727
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 173/331 (52%), Gaps = 6/331 (1%)
Query: 59 EVLGLYNQMIKEDVRP-DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
EV+ Y+++ K ++ D S F LKA S + + G+ + ++ G+ + +G+S+
Sbjct: 30 EVVSHYHEIKKAGIQTVDVSVFPPILKAW-SFLSHRHGKSLHACLIKQGFDSFTSIGNSI 88
Query: 118 LNLYVKCGKMNEAMVAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+ Y++CG + A+ F M+R +D V W+ +I+G + NG + + + G + +
Sbjct: 89 MGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPN 148
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
M+ +IQAC LG GL +HGY I+ VQ SL+ MY ++ A +F
Sbjct: 149 ISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFD 207
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLK 295
M +++ W +I G+ Q L++ +M G EPD V +VS L ACA +
Sbjct: 208 EMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVC 267
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+ +HG + R FD +L + S+IDMYSKC A +F+++ R+ +SWN +++ +
Sbjct: 268 TGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFV 327
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
++ + EA SL M + V+ D T ++L
Sbjct: 328 LNENYSEAQSLISSMRKERVETDEVTLVNIL 358
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 20/311 (6%)
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
NG+ +E V Y +KK GI +V + I R G S+H I++ + +
Sbjct: 25 NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSI 84
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
S++ Y + G D+A VF +M R + V+W LI G NG + L + G
Sbjct: 85 GNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAG 144
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL-VLGTSVIDMYSKCGVPSCAR 332
FEP+ ++V + AC +G G +HGY ++ + + + S++ MY + CAR
Sbjct: 145 FEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDADM-ECAR 203
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHS 391
LFD+M +D+I+W+V+I Y + L +F +M+ ++PD S+L A + S
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASS 263
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYAC-------MVDLLARAGEVEEALKIVDSMSTEP 444
V GR L++ + + C ++D+ ++ + A K+ + +S
Sbjct: 264 RDVCTGRLVHGLVI--------HRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRN 315
Query: 445 GLAVWVALLSG 455
++ W ++LSG
Sbjct: 316 NVS-WNSMLSG 325
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 309/562 (54%), Gaps = 2/562 (0%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G+ ++++Y A KLF + T+N +I Y + E L + +MI
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V PD+ TF+ L + +L+ ++I + D+F+ S++++ Y KC ++
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F + D+V +++MI+G + NG ++++ ++ + K I +E+ ++ ++
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + G +HG+ I++ + + +++DMYAK G ++LA +F+ +S+ +IV+W ++
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I+ AQ+ + +++ +M G D VS+ +AL ACA + GK+IHG+ ++
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++ +++IDMY+KCG A +F M+ ++++SWN IIA+ G HG +++L LF +
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 369 MIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M+E + ++PD TF ++S+ H G V+EG +F M Y IQP ++HYAC+VDL RA
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G + EA + V SM P VW LL C HK + E + K++ L+P + G + L+S
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS 753
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N A ++WE V VR M++ ++K+PGYS +E+N H F+ D +H + I +L
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLN 813
Query: 548 KLYLEMRAISSWLQGHMEEHEE 569
L E+R Q ++ H E
Sbjct: 814 SLLGELRLEGYIPQPYLPLHPE 835
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 230/459 (50%), Gaps = 5/459 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPF 58
+I ++S + RI+ +Y K+F L LR + +NSII ++ R
Sbjct: 61 LIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN 120
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L Y +M+ V PD STF +KACV+L + K + + LG + FV SS++
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y++ GK++ F+++ +KD V W+ M+NG G + + M+ + I + V
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ CA G+ +HG + ++ + ++ SL+ MY+K G D AS +F+ M
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
SR + VTW +ISG+ Q+GL +L EM S G PD+++ S L + ++ L+ K
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH Y +R ++ L +++ID Y KC S A+ +F Q S D++ + +I+ Y +G
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
++L +F +++ + P+ T S+L + ++ GR ++ K
Sbjct: 421 LYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
A ++D+ A+ G + A +I + +S + W ++++ C
Sbjct: 481 A-VIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRC 517
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 7/316 (2%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK-- 136
++ L+AC + L+ G+++ + D + +L +Y CG ++ F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
++R + W+S+I+ V NG +A+ Y +M G+ D L++AC L + + G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-G 156
Query: 197 LSVHGYSIRRHLNLDVK--VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+ ++ L +D V +SL+ Y + G +D+ S +F + + + V W +++G+A
Sbjct: 157 IDFLSDTV-SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLV 313
+ G S ++ M+ P++V+ L CA + LG +HG V DF
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++ MYSKCG A LF M D ++WN +I+ Y G EE+L+ F +MI +
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 374 VKPDHSTFASLLSALS 389
V PD TF+SLL ++S
Sbjct: 336 VLPDAITFSSLLPSVS 351
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK--NMSR 240
L+QAC++ R G VH + I ++ D ++ MYA G +F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I W ++IS F +NGL L +M G PD + + AC + K G
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDF 159
Query: 301 HGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
TV D N + +S+I Y + G LFD++ +D + WNV++ Y G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL-MVSKYKIQPTEKHY 417
+ + F M + P+ TF +LS + L++ G L +VS + + K+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + ++ G ++A K+ MS W ++SG
Sbjct: 280 --LLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 294/547 (53%), Gaps = 38/547 (6%)
Query: 46 SIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD---LKMGEEIWRKA 102
+++ A+ R P L+ ++I+E + D+ T A+KA S + GE + A
Sbjct: 107 TMMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVA 166
Query: 103 VELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
++ G+ V VG+++++ Y + A F++M +D+V W+++++G G EA
Sbjct: 167 LKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEA 226
Query: 162 VDAYKRMK-KEGIDADEVVMMGLIQACADLGDSRFGLSVHGY----SIRRHLNL------ 210
+ RM G+ +EV ++ ++ A +G FG V+ Y + R +NL
Sbjct: 227 WRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALID 286
Query: 211 ---------------------DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
DV T++V+ YAK G L+ A+ +F +M R N V+W +
Sbjct: 287 MFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCM 346
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVR-R 307
I+ ++Q + L M G EP + LVS L ACAQ+G L LG+ I+ Y + +
Sbjct: 347 IAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGK 406
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ LG + ID+Y+KCG A LF +M R+++SWN +I ++ +HG EE L LF
Sbjct: 407 AVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFE 466
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
Q+ T + PD TF LLSA SHSGLV EGR +F M Y I+P +HYACM+DLL +
Sbjct: 467 QLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKI 526
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G +EEA ++ M E A W ALL+ C + IGE A K+++LNP D GI+ L+S
Sbjct: 527 GLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMS 586
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
+A + KW++V +R MR+ G+KK PG S +EV+G+ H F++ D SH EDI LK
Sbjct: 587 QIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAALK 646
Query: 548 KLYLEMR 554
+Y ++
Sbjct: 647 NIYFHLK 653
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 33/316 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP 74
++ Y + AR LF+E+P R V ++ +++ Y+R+ E ++ +M + ++P
Sbjct: 182 LVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQP 241
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN------------------------- 109
+ T + A + L G ++R + G G
Sbjct: 242 NEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVF 301
Query: 110 ------DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
DV+ ++M+N Y KCG + A F+ M R++ V WS MI QP EAV
Sbjct: 302 DSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVR 361
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH-GYSIRRHLNLDVKVQTSLVDMY 222
+K M +EG++ ++ ++ ACA LG G ++ Y I L V + + +D+Y
Sbjct: 362 LFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVY 421
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
AK G D AS +F M+ N+V+W ++I A +G + L L +++ PD ++ +
Sbjct: 422 AKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFL 481
Query: 283 SALLACAQIGFLKLGK 298
L AC+ G + G+
Sbjct: 482 GLLSACSHSGLVSEGR 497
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 13/245 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y D+ SA +LF+++P R +++ +I AYS+ P E + L+ MI+E V P
Sbjct: 315 MVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPI 374
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAF 134
++ L AC L L +G I+ V G V +G++ +++Y KCG + A F
Sbjct: 375 NAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLF 434
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+M +++V W+SMI +GQ E + ++++K I DE+ +GL+ AC S
Sbjct: 435 AEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSAC-----SH 489
Query: 195 FGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
GL G + + L ++ ++D+ K G L+ A V K M + WG
Sbjct: 490 SGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWG 549
Query: 248 ALISG 252
AL++
Sbjct: 550 ALLNA 554
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 317/554 (57%), Gaps = 5/554 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ A + ++++Y D+ AR+LF+E+ + V ++ +I Y + E P
Sbjct: 175 LIKSGFWAISSVQNSLLSMYVDA-DMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVG 233
Query: 61 LGLYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L ++ +M+ + PD LKAC S D+ G + + G+ D+FV +S+++
Sbjct: 234 LQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLID 293
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KC A F ++ +++ V W+SM++G V N EA M+KE ++ DEV
Sbjct: 294 MYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVT 353
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++Q C S+H IRR + V ++L+D YAK +++A VF M
Sbjct: 354 LVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMR 413
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
R ++V+W +ISGFA G + + EM +P+ +++++ L AC+ LK K
Sbjct: 414 RRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKW 473
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
HG +R+ F + +GT+V+DMYSKCG +R FDQ+ +++++W+ +IA+YG++G
Sbjct: 474 AHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGL 533
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EAL+LF +M +KP+ T S+L+A SH GLVEEG F MV + ++P +HY+
Sbjct: 534 AHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYS 593
Query: 419 CMVDLLARAGEVEEALKIVDSM--STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
CMVD+L RAG+++ A++++ +M + + G ++W +LLS C ++ +G++ +VL+L
Sbjct: 594 CMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELE 653
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + + + S+ +A + W++ A +R ++ G+K V GYS+V ++ + F+ D SH
Sbjct: 654 PSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSH 713
Query: 537 NQYEDIVYVLKKLY 550
+ ++I + ++L+
Sbjct: 714 PRSDEIFSMAQQLH 727
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 173/331 (52%), Gaps = 6/331 (1%)
Query: 59 EVLGLYNQMIKEDVRP-DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
EV+ Y+++ K ++ D S F LKA S + + G+ + ++ G+ + +G+S+
Sbjct: 30 EVVSHYHEIKKAGIQTVDVSVFPPILKAW-SFLSHRHGKSLHACLIKQGFDSFTSIGNSI 88
Query: 118 LNLYVKCGKMNEAMVAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+ Y++CG + A+ F M+R +D V W+ +I+G + NG + + + G + +
Sbjct: 89 MGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPN 148
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
M+ +IQAC LG GL +HGY I+ VQ SL+ MY ++ A +F
Sbjct: 149 ISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFD 207
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLK 295
M +++ W +I G+ Q L++ +M G EPD V +VS L ACA +
Sbjct: 208 EMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVC 267
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+ +HG + R FD +L + S+IDMYSKC A +F+++ R+ +SWN +++ +
Sbjct: 268 TGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFV 327
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
++ + EA SL M + V+ D T ++L
Sbjct: 328 LNENYSEAQSLISSMRKERVETDEVTLVNIL 358
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 20/311 (6%)
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
NG+ +E V Y +KK GI +V + I R G S+H I++ + +
Sbjct: 25 NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSI 84
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
S++ Y + G D+A VF +M R + V+W LI G NG + L + G
Sbjct: 85 GNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAG 144
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL-VLGTSVIDMYSKCGVPSCAR 332
FEP+ ++V + AC +G G +HGY ++ + + + S++ MY + CAR
Sbjct: 145 FEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDADM-ECAR 203
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHS 391
LFD+M +D+I+W+V+I Y + L +F +M+ ++PD S+L A + S
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASS 263
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYAC-------MVDLLARAGEVEEALKIVDSMSTEP 444
V GR L++ + + C ++D+ ++ + A K+ + +S
Sbjct: 264 RDVCTGRLVHGLVI--------HRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRN 315
Query: 445 GLAVWVALLSG 455
++ W ++LSG
Sbjct: 316 NVS-WNSMLSG 325
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 280/508 (55%), Gaps = 11/508 (2%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI +A +F ++ V +NS+I + +P + LY Q+I+ PD TF LK
Sbjct: 42 DINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLK 101
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC ++ D G+ I V+ G+ D + + +L++YV C M + F+ + ++V
Sbjct: 102 ACCAIADQDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVA 161
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ +I G V N QP EA+ +K M G++ +E+ M+ + CA D G VH + I
Sbjct: 162 WTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQH-I 220
Query: 205 RR--------HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
R+ N ++ + T++++MYAK G +A +F M + NIV+W ++I+ + Q
Sbjct: 221 RKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQY 280
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
L+L +M + G PD + +S L CA + L LG+++H Y + ++ L
Sbjct: 281 ERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLA 340
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TMV 374
T+++DMY+K G A+ +F +Q RD++ W +I +HG G EAL +F M E + +
Sbjct: 341 TALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSL 400
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH T+ +L A SH GLVEE + F LM Y I P +HY CMVDLL+R+G EA
Sbjct: 401 VPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAE 460
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++++M+ +P +++ ALL GC H+ + +V +++ +L G H L+SN +A
Sbjct: 461 RLMETMAIQPNISIXGALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKAG 520
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+WE+V G RK M+ + K+ G+S VE+
Sbjct: 521 RWEDVNGTRKVMKHKRITKIIGHSSVEM 548
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 173/344 (50%), Gaps = 12/344 (3%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G +N A + F ++ + W+SMI G V N PR ++ Y+++ + G D ++
Sbjct: 41 GDINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVL 100
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+AC + D G +H ++ D T L+ MY + VF N+ N+V
Sbjct: 101 KACCAIADQDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVV 160
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W LI+G+ N L++ +M CG EP+ +++V+AL+ CA+ G+ +H +
Sbjct: 161 AWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQH- 219
Query: 305 VRRFDF---------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
+R+ + N++L T++++MY+KCG AR LF++M R+++SWN +I +Y
Sbjct: 220 IRKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQ 279
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+ +EAL LF M + + PD +TF S+LS +H + G+ + K I
Sbjct: 280 YERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQT-VHAYLXKTGIGTDIS 338
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++D+ A+ G + A KI S+ + +W ++++G H
Sbjct: 339 LATALLDMYAKTGGLGSAQKIFSSLQKRD-VVMWTSMINGLAMH 381
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 151/306 (49%), Gaps = 8/306 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ A + ++ +Y D+ S K+F+ +P+ V + +I Y P+E
Sbjct: 119 IVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQPYEA 178
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-------GNDVFV 113
L ++ M V P+ T AL C D G+ + + + GY +++ +
Sbjct: 179 LKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNSNIIL 238
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
+++L +Y KCG A F KM ++++V W+SMIN + +EA+D + M GI
Sbjct: 239 ATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGI 298
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D+ + ++ CA L G +VH Y + + D+ + T+L+DMYAKTG L A
Sbjct: 299 YPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQK 358
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIG 292
+F ++ + ++V W ++I+G A +G L + M + PD ++ + L AC+ +G
Sbjct: 359 IFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVG 418
Query: 293 FLKLGK 298
++ K
Sbjct: 419 LVEEAK 424
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 138/270 (51%), Gaps = 20/270 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y AR LF ++P R + ++NS+I AY++ E E L L+ M + PD
Sbjct: 242 ILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGIYPD 301
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF L C L L +G+ + + G G D+ + +++L++Y K G + A F
Sbjct: 302 KATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQKIFS 361
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLG--- 191
+Q++D+V W+SMINGL +G EA+ ++ M ++ + D + +G++ AC+ +G
Sbjct: 362 SLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLVE 421
Query: 192 --DSRFGLSVHGYSI---RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVT 245
F L YSI R H +VD+ +++GH A + + M+ + NI
Sbjct: 422 EAKKHFRLMTEMYSIVPGREHYG-------CMVDLLSRSGHFGEAERLMETMAIQPNISI 474
Query: 246 WGALISG--FAQN-GLAGSTLELLMEMQSC 272
GAL+ G +N +A E L E++SC
Sbjct: 475 XGALLYGCQIHENLXVANQVKERLTELESC 504
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 302/553 (54%), Gaps = 32/553 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F +P R ++N++I +S+ + L ++ +M + P+ T+ L AC S
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
DLK G + + + + + D+ G+ ++++Y KCG ++ A F+ ++ D + W+S+
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G+V G +A+ + +M++ + DE ++ ++ C+ + G +HGY+I+ +
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGM 410
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFK-------------------------------N 237
V +++ MYAK G D A VF+
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDM 470
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M NIVTW +++S + QNG + L+L + M+S G +PD ++ +++ ACA + +KLG
Sbjct: 471 MPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLG 530
Query: 298 KSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ + + N+ + S++ MYS+CG+ A+ FD + +DLISWN ++A++ +
Sbjct: 531 MQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQN 590
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G G + + F M++T KP+H ++ S+LS SH GLV EG+++FD M + I PT +H
Sbjct: 591 GLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEH 650
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
++CMVDLL RAG +E+A +++ M +P VW ALL C H + E AKK+++L+
Sbjct: 651 FSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELD 710
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ + L+SN ++ + + VA +RK M+ G++ G S +EV+ +H F +++ SH
Sbjct: 711 VEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSH 770
Query: 537 NQYEDIVYVLKKL 549
Q +++ L+++
Sbjct: 771 PQIKEVYLKLEEM 783
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 228/496 (45%), Gaps = 71/496 (14%)
Query: 29 ARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKED----VRPDSSTFTVA 82
A KLF+E+P+R D+ + ++I YS+ ++ MI++ D +FT
Sbjct: 93 AEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSV 152
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+KAC SL D ++ ++ +LG+G + + +S++ +YVKCG ++ A F ++R L
Sbjct: 153 MKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSL 212
Query: 143 VCWSSMINGL-----------VFNGQPR--------------------EAVDAYKRMKKE 171
CW+SMI G +FN P + + + M +
Sbjct: 213 FCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQ 272
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G + + ++ ACA D ++G +H +R +LD+ L+DMYAK G LDLA
Sbjct: 273 GFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLA 332
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VFK++ + ++W +LI+G GL L L +M+ D L + L C+
Sbjct: 333 KRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGP 392
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG-----------VP----------- 328
+ G+ +HGYT++ + +G ++I MY+KCG +P
Sbjct: 393 DYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMI 452
Query: 329 ---------SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
AR FD M R++++WN ++++Y +G EE L L++ M V+PD
Sbjct: 453 TAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWI 512
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
TF + + A + +V+ G +K+ + +V + +R G ++EA DS
Sbjct: 513 TFTTSIRACADLAIVKLGMQ-VVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDS 571
Query: 440 MSTEPGLAVWVALLSG 455
+ + L W A+L+
Sbjct: 572 ID-DKDLISWNAMLAA 586
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 172/410 (41%), Gaps = 79/410 (19%)
Query: 119 NLYVKCGKMNEAMVAFEKMQR---------------------------------KDLVCW 145
++Y CG ++A F++ KD V W
Sbjct: 51 HMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSW 110
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKE----GIDADEVVMMGLIQACADLGDSRFGLSVHG 201
++MI+G NG + + + M ++ G + D +++AC LGDSR + +H
Sbjct: 111 TTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHA 170
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI------------------ 243
+ ++ +Q S+V MY K G +DLA VF ++ R ++
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230
Query: 244 -------------VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
V+W LIS F+Q+G L + +EM + GF P+ ++ S L ACA
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 291 IGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
LK G +H +R +LV G +IDMY+KCG A+ +F ++ D ISWN +
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I G GE+AL LF QM + V D ++L S G ++ Y
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGE-----LLHGYT 405
Query: 410 IQPTEKHYA----CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
I+ A ++ + A+ G+ ++A + M ++ W A+++
Sbjct: 406 IKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS-WTAMITA 454
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 12/242 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I + DI AR F+ +P R + T+NS++ Y + E L LY M V+PD
Sbjct: 451 MITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPD 510
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT +++AC L +K+G ++ A + G +V V +S++ +Y +CG + EA F+
Sbjct: 511 WITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFD 570
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KDL+ W++M+ NG + +D ++ M K + + + ++ C S
Sbjct: 571 SIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGC-----SHM 625
Query: 196 GLSVHGY----SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
GL G S+ R + + + +VD+ + G L+ A + + M + N W A
Sbjct: 626 GLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSA 685
Query: 249 LI 250
L+
Sbjct: 686 LL 687
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 302/545 (55%), Gaps = 10/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SA +LF +P R ++ +++ S+ + L + M + V P
Sbjct: 212 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A +A +L A +G+ ++FV S++ ++Y KCG ++EA F+
Sbjct: 272 RFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFD 330
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+M +KD V W++MI+G NG AV +++ MK+EG + AD+ V ++ A L D
Sbjct: 331 QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGW 390
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK-NMSRINIVTWGALISGF 253
S+H + L+V V+ +L+DMYAK+ ++ AS V K + N+V+ ++I G+
Sbjct: 391 LSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGY 450
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR----RFD 309
+ L + +E++ G EP+ + S + CA L+ G +H ++ R
Sbjct: 451 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 510
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
F +G++++DMY KCG+ S + LF++++ R I+WN +I + HGHG EA+ F +M
Sbjct: 511 F---VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM 567
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
I + ++P+H F SLL+A SH+GLV+EG +F M + I+P E+HY+C++D RAG
Sbjct: 568 IYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGR 627
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA K + M +P W +LL C +GE A+ ++KL P + GIH +S
Sbjct: 628 LDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGI 687
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +WE+V VRK MR S +KK+PG+S V+ N + H F ED SH Q +DI L++L
Sbjct: 688 YASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEEL 747
Query: 550 YLEMR 554
++
Sbjct: 748 TTRIK 752
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 179/421 (42%), Gaps = 69/421 (16%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
L++C DL+ G + + V G F+ + ++ +Y C + A+ F M R++
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRN 86
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGID--------------------------- 174
V W+++++GL N +A+ A+ M++ G+
Sbjct: 87 AVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHS 146
Query: 175 ---------------------ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVK 213
A V + L+Q+C GD R G +H R L+
Sbjct: 147 GPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHA---RLVLSGAAA 203
Query: 214 VQT----SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
T L+ MY+ L A +F M R N V+W L+SG +QN + L M
Sbjct: 204 ASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAM 263
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPS 329
+ G P +L SA A A +G +S FD L + +++ DMYSKCG+ S
Sbjct: 264 RRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCGLLS 323
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDHSTFASLLSAL 388
A +FDQM +D ++W +I Y +G E A+ F M E +V D F S+LSA
Sbjct: 324 EACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA- 382
Query: 389 SHSGLVEEGRYWFD----LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
SG +++G W V+K + ++D+ A++ +VE A ++ + +P
Sbjct: 383 --SGGLKDG--WLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRV---LKIDP 435
Query: 445 G 445
G
Sbjct: 436 G 436
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 218/508 (42%), Gaps = 67/508 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SA +LF +P R ++ +++ S+ + L + M + V P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
Query: 76 SSTF------------TVALKACVS---LMDLKMGEEIWR-------------------- 100
+ T+A C S LM G+ +WR
Sbjct: 122 RLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCG 181
Query: 101 KAVELGYGN--------------DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
+A +L G F+ + ++ +Y C + A+ F M R++ V W+
Sbjct: 182 RAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWT 241
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++++GL N +A+ A+ M++ G+ + +A A LG S S
Sbjct: 242 TLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTA-SASV 300
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ ++ V ++L DMY+K G L A VF M + + V W A+I G+A+NG + +
Sbjct: 301 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 360
Query: 267 MEMQSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
+M+ G D S L A + L KSIH + F+ + + ++IDMY+K
Sbjct: 361 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 420
Query: 325 C-GVPSCARALFDQMQSRDLISWNVIIASYGIHGH-----GEEALSLFLQMIETMVKPDH 378
V S +R L D WNV+ + I G+ EEAL +++++ V+P+
Sbjct: 421 SMDVESASRVL-----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 475
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TF+S++ + L+E+G V K + + +VD+ + G + ++++ +
Sbjct: 476 FTFSSMIKGCAMQALLEQGAQ-LHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFN 534
Query: 439 SMSTEPGLAVWVALLS--GCHNHKKFSI 464
+ +A W A+++ H H + +I
Sbjct: 535 EIEYRTDIA-WNAVINVFAQHGHGREAI 561
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 123/336 (36%), Gaps = 62/336 (18%)
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT----SLVDMYAKTGHLDL 230
A V + L+Q+C GD R G +H R L+ T L+ MY+ L
Sbjct: 18 ATTVHLASLLQSCGRAGDLRRGRLLHA---RLVLSGAAAASTFLANHLITMYSHCADLAS 74
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP-------------- 276
A +F M R N V+W L+SG +QN + L M+ G P
Sbjct: 75 ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLG 134
Query: 277 ----------------------------------DSVSLVSALLACAQIGFLKLGKSIHG 302
+V L S L +C + G L+ G+ +H
Sbjct: 135 PKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHA 194
Query: 303 YTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
V + L +I MYS C + A LF M R+ +SW +++ +
Sbjct: 195 RLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHA 254
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC- 419
+AL+ F M V P +S A + G R S TE A
Sbjct: 255 DALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR---SCTASASVGFDTELFVASN 311
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ D+ ++ G + EA ++ D M + +A W A++ G
Sbjct: 312 LADMYSKCGLLSEACRVFDQMPQKDAVA-WTAMIDG 346
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 296/528 (56%), Gaps = 9/528 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A+ +F L YNS+I A S ++P E L LY+ M++ ++PD T+ +KAC
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
G + V+ G+ D ++ SS+++LY + A F +D+V W++M
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G V + + A + RM + D + +I A +G + R+L
Sbjct: 268 IDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 323
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
S++ + K G+++ A +F M ++V+W ++++ +AQ G L L +
Sbjct: 324 ----VSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGV 327
M++ G +P ++VS L ACA +G L G +H Y R + N ++GT+++DMY+KCG
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S A +F+ M+S+D+++WN IIA IHG+ +EA LF +M E V+P+ TF ++LSA
Sbjct: 440 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 499
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+G+V+EG+ D M S Y I+P +HY C++DLLARAG +EEA++++ +M EP +
Sbjct: 500 CSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPS 559
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
ALL GC H F +GE V K+++ L P G + L+SN +A +KW++ VR M+
Sbjct: 560 ALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMK 619
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+G+ KVPG SV+E+ G +H F+ D SH + I L +++ +++
Sbjct: 620 VNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKS 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 209/457 (45%), Gaps = 55/457 (12%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ V +I LY D+ +A++LF R V ++N++I Y +
Sbjct: 221 VVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHA 280
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++++M+ DV ++ + + + + ++ + E ++ +SML
Sbjct: 281 RMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPE----RNLVSWNSMLAG 332
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
+VKCG + +A F +M +D+V W+SM+ G+P EA+ + +M+ G+ E +
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ L+ ACA LG GL +H Y + ++ V T+LVDMYAK G + LA+ VF M
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 452
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W +I+G A +G +L EM+ G EP+ ++ V+ L AC+ G + G+ +
Sbjct: 453 KDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 512
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
+ ++ Y C + ARA G E
Sbjct: 513 LDCMSSSYGIE-----PKVEHYG-CVIDLLARA-----------------------GFLE 543
Query: 361 EALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK--YKIQPTEK-H 416
EA +++I TM ++P+ S +LL G E G MV K +QP
Sbjct: 544 EA----MELIGTMPMEPNPSALGALLGGCRIHGNFELGE-----MVGKRLINLQPCHSGR 594
Query: 417 YACMVDLLARAGEVEEALKI-----VDSMSTEPGLAV 448
Y + ++ A A + ++A K+ V+ +S PG++V
Sbjct: 595 YILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSV 631
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 44/264 (16%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L A +F ++ + +LI + + L L M G +PD ++ + A
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204
Query: 288 CAQIGFLKLGKSIHGYTVRR-FD-------------------------FNL------VLG 315
C + G +H + V+ F+ FNL V
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++ID Y K AR +FD+M RD+ISWN +I Y I G +EA LF +M E +
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL- 323
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
++ S+L+ G VE+ F M + + + M+ A+ G+ EAL
Sbjct: 324 ---VSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVS-----WNSMLACYAQCGKPNEALA 375
Query: 436 IVDSM---STEPGLAVWVALLSGC 456
+ D M +P A V+LLS C
Sbjct: 376 LFDQMRAVGVKPTEATVVSLLSAC 399
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 268/471 (56%), Gaps = 3/471 (0%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMV 132
PD + ++ LK C L ++ G + V+ + N + + + ++N+Y KCG +++A
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M KD+V W+++I G N +PR+A+ + +M + G + + L++A
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + ++ V V ++LVDMYA+ GH+D A F M + V+W ALISG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
A+ G L LL +MQ F+P + S L ACA IG L+ GK +H + ++
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G +++DMY+K G A+ +FD++ D++SWN ++ HG G+E L F QM+
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++P+ +F +L+A SHSGL++EG Y+F+LM KYK++P HY VDLL R G ++
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLD 443
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A + + M EP AVW ALL C HK +G A++ +L+P D G L+SN +A
Sbjct: 444 RAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+W +VA VRK M++SG+KK P S VE+ +H F+ D++H + ++I
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEI 554
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 156/282 (55%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + AR++F+E+P + + T+ ++I +S+ P + L L+ QM++ +P+
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPN 188
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + LKA S L G ++ ++ GY + V+VGS+++++Y +CG M+ A +AF+
Sbjct: 189 HFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFD 248
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M K V W+++I+G G+ A+ +M+++ ++ ACA +G
Sbjct: 249 GMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQ 308
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L L + +L+DMYAK G +D A VF + + ++V+W +++G AQ
Sbjct: 309 GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+GL TL+ +M G EP+ +S + L AC+ G L G
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 124/236 (52%), Gaps = 1/236 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + +A+ F+ +P + ++N++I ++RK L L +M +++ +P
Sbjct: 230 LVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPT 289
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T++ L AC S+ L+ G+ + ++ G F+G+++L++Y K G +++A F+
Sbjct: 290 HFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFD 349
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ + D+V W++M+ G +G +E +D +++M + GI+ +E+ + ++ AC+ G
Sbjct: 350 RLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDE 409
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
GL + + DV + VD+ + G LD A + M WGAL+
Sbjct: 410 GLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 23/266 (8%)
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLA-CAQIGFLKLGKSIHGYTVRR--FDFNLVLG 315
G+ L L +Q PD +L S LL C ++G ++ G+ +H + V D +LVL
Sbjct: 68 GGTGLYALDLIQRGSLVPD-YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQ 126
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++MY+KCG AR +FD+M ++D+++W +IA + + +AL LF QM+ +
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQ 186
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
P+H T +SLL A ++ G + KY Q + + +VD+ AR G ++ A
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCL-KYGYQSSVYVGSALVDMYARCGHMDAAQL 245
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL-----NPDDLGIHALVS--- 487
D M T+ ++ W AL+SG H + GE + K+ P +++S
Sbjct: 246 AFDGMPTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACA 301
Query: 488 NFFAMEQ-KWEEVAGVRKTMRKSGMK 512
+ A+EQ KW V M KSG+K
Sbjct: 302 SIGALEQGKW-----VHAHMIKSGLK 322
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 293/542 (54%), Gaps = 10/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG-LYNQMIKEDVRP 74
+I +Y + +A+++F+ + V Y S+I A+ R FE+ QM+K+ ++P
Sbjct: 155 LIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN-GEFELAAEALIQMLKQGLKP 213
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ T T L AC ++ ++ + +K +G V+ +++++ Y + G+ A
Sbjct: 214 NEHTMTTILTACPRVLGQQIHGYLIKK---IGLRSQSVYSSTALIDFYSRNGEFKLAKAV 270
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + K++V W SM+ + +G+ EA+ + M EG+D +E + ++ AC +G
Sbjct: 271 FDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG-- 328
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +I+ L D++V +L+ MY +TG ++ + + ++V+W IS
Sbjct: 329 -LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISAN 387
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG + LL +M S GF P+ + S L +CA + L G H ++ D +
Sbjct: 388 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 447
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
G ++I+MYSKCG AR FD M + D+ SWN +I + HG +AL +F +M
Sbjct: 448 CTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSN 507
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD STF +L +HSG+VEEG +F LM+ +Y P HYACM+D+L R G +E
Sbjct: 508 GIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDE 567
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL++++ M EP +W LL+ C H+ IG+ A ++++L+ D + L+SN +AM
Sbjct: 568 ALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAM 627
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+WE+ VR+ M ++G+KK G S +E+N E+H F D SH + I +L +L
Sbjct: 628 HGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAV 687
Query: 553 MR 554
M+
Sbjct: 688 MQ 689
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 232/459 (50%), Gaps = 14/459 (3%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A LF+ +P + V + S++ Y+R P L ++ M++ V P+ AL A
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C L L+ GE++ AV G+ D ++GS ++ +Y +CG + A F++M D+V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+S+I+ NG+ A +A +M K+G+ +E M ++ AC + G +HGY I+
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIK 239
Query: 206 R--HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ + V T+L+D Y++ G LA VF ++ N+V+W +++ + ++G L
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
++ +M S G +P+ +L L AC IG LG+ +H ++ ++ + +++ MY
Sbjct: 300 QVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMY 356
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+ G+ A+ +++++ DL+SW I++ +G GE+A++L QM P+ F+
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFS 416
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S+LS+ + +++G F + K ++++ ++ G++ A D M T
Sbjct: 417 SVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 475
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDD 479
+ W +L+ G H + +V K+ + PDD
Sbjct: 476 H-DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 513
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 179/349 (51%), Gaps = 12/349 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + LN VK G++ +A+ F++M RK++V W+S+++G NG+P A+ + M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ ++ + ACADLG R G VH ++R D + + L++MY++ G L
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF M ++V + +LIS F +NG E L++M G +P+ ++ + L AC
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 290 QIGFLKLGKSIHGYTVRRFDF---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
++ LG+ IHGY +++ ++ T++ID YS+ G A+A+FD + ++++SW
Sbjct: 227 RV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSW 282
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
++ Y G EEAL +F MI V P+ + +L A GL GR
Sbjct: 283 CSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQ-LHCSAI 338
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K+ + + ++ + R G VEE +++ + P L W +S
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN-PDLVSWTTAISA 386
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 287/552 (51%), Gaps = 38/552 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +FE +P +N + ++ P L LY MI + P+ TF LK+C
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR--------- 139
K G++I ++LG+ D++V +S++++Y + G++ +A F++
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 140 ----------------------KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
KD+V W++MI+G G ++A++ +K M K + DE
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
M ++ ACA G G VH + ++K+ +L+D+Y+K G ++ A + +
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+S ++++W LI G+ L L L EM G P+ V+++S L ACA +G + +G
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327
Query: 298 KSIHGYTVRRFDFNLV-----LGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIA 351
+ IH Y ++ +V L TS+IDMY+KCG A + D +R L +WN +I
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIF 387
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
+ +HG A +F +M + ++PD TF LLSA SHSG+++ GR F M Y I
Sbjct: 388 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNIT 447
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
P +HY CM+DLL +G +EA +++++M EP +W +LL C H +GE AKK
Sbjct: 448 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKK 507
Query: 472 VLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-KKVPGYSVVEVNGELHAFI 530
++K+ P++ G + L+SN +A KW EV +R + GM KKVPG S +E++ +H FI
Sbjct: 508 LIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFI 567
Query: 531 MEDKSHNQYEDI 542
+ DK H Q +I
Sbjct: 568 IGDKLHPQNREI 579
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 208/384 (54%), Gaps = 16/384 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + I SA+K+F+E+P++ V ++N++I Y+ + + L L+ +M+K +V+PD
Sbjct: 147 LITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPD 206
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST + AC +++G ++ + G+G+++ + +++++LY KCG++ A E
Sbjct: 207 ESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLE 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD++ W+++I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 267 GLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 326
Query: 196 GLSVHGYSIRRHLNLDV----KVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGAL 249
G +H Y ++ + V ++TSL+DMYAK G +D A V + S N + TW A+
Sbjct: 327 GRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQV-SDSSAFNRSLSTWNAM 385
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
I GFA +G A + ++ M+ G EPD ++ V L AC+ G L LG++I + R D
Sbjct: 386 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI--FRSMRQD 443
Query: 310 FNLVLGTS----VIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALS 364
+N+ +ID+ G+ A + + M D + W ++ + IHG+ E S
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 503
Query: 365 LFLQMIETMVKPDHSTFASLLSAL 388
++I+ ++P++ LLS +
Sbjct: 504 FAKKLIK--IEPENPGSYVLLSNI 525
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 40/263 (15%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L A VF+ + N + W + G A + S L+L + M S G P+ + L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC--------------------- 325
CA+ K G+ IHG+ ++ FD +L + TS+I MY++
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 326 ----------GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
G A+ +FD++ +D++SWN +I+ Y G+ ++AL LF +M++T VK
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 376 PDHSTFASLLSALSHSGLVEEGRY---WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD ST A+++SA + SG +E GR W ++ + K ++DL ++ GEVE
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSW----INDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A ++++ +S + ++ W L+ G
Sbjct: 261 ACELLEGLSNKDVIS-WNTLIGG 282
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 278/510 (54%), Gaps = 41/510 (8%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARK+F+++P R V +N++I Y+ E L LY+ M + PD+ TF +++C
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L+ G+E+ V+ G+ +DVFV SS++ +Y + G+ + F +M +++V W+++
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G V N +E + ++ M G + V ++ ++ ACA L G +HGY I+ +
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ DV + +L+ +Y K G+++ A +F M N+V+W A+I+ + QN + ++L
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVP 328
MQ+ + DF+ + SVI Y
Sbjct: 321 MQA----------------------------------EKVDFDYITMVSVISAY------ 340
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
AR +F+++ R ++SW +I + HGHGE+AL LF +M + VKP+ TFA++ +A
Sbjct: 341 -LAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTAC 399
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
HSGLVEEGR F+ M+ Y I P +H ACMVDLL RAG + EA + +D M EP ++V
Sbjct: 400 RHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSV 459
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
W ALL C H + E VA+K+ L+P + + L+SN +A +WE+ A +RK M +
Sbjct: 460 WGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEE 519
Query: 509 SGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+KK+PG+S+VEVN H F+ +S +
Sbjct: 520 RELKKIPGHSLVEVNRRFHTFLSGSRSQSS 549
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 175/392 (44%), Gaps = 56/392 (14%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + + +F E+ +R + ++ ++I Y + E LG++ +M+ +P+
Sbjct: 169 LVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPN 228
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T L AC L L +G+ I ++LG DV + ++++ LY KCG + A F+
Sbjct: 229 AVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFD 288
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++LV W++MI N AV ++RM+ E +D D + M+ +I A
Sbjct: 289 GMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISA--------- 339
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
LA VF+ + ++V+W ++I A
Sbjct: 340 ---------------------------------YLAREVFERLPCRSVVSWTSMIGACAS 366
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G L+L M+ G +P+S + + AC G ++ G+ H ++ R D++++ G
Sbjct: 367 HGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK-HFESMMR-DYSIMPG 424
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++D+ + G A D+M D+ W ++ S IH + E A + ++
Sbjct: 425 VEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLF 484
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++ P TF L+S + E GR W D
Sbjct: 485 --LLDPQTVTFYVLMSNI----YAEAGR-WED 509
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 296/536 (55%), Gaps = 11/536 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
+R +F+ L + V +NS+I + E L+NQM DV PD T + K
Sbjct: 77 SRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSE 136
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L G+ I K++ G+ +D V +S++++Y KCG +E+ F++M ++ W+ +
Sbjct: 137 LGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVL 196
Query: 149 INGLVFNGQPR---EAVDAYKRMKKEGIDADEVVMMGLIQAC-ADLGDSRFGLSVHGYSI 204
I G +G E + K+M+ + + D + L+ C D+G +G +H Y +
Sbjct: 197 IAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIV 256
Query: 205 RRHLNL----DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+ L L DV + L+DMY+++ + + VF M N+ +W A+I+G+ +NG +
Sbjct: 257 KNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSD 316
Query: 261 STLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L L +MQ G EP+ VSLVS L AC+ L G+ IHG+ VR+ + + L ++
Sbjct: 317 EALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNAL 376
Query: 319 IDMYSKCGVPSCARALF-DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
IDMYSKCG AR +F D +D ISW+ +I+ YG+HG G+EA+ L+ +M++ ++PD
Sbjct: 377 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPD 436
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T +LSA SGLV EG + +++ Y I+PT + AC+VD+L RAG+++ AL +
Sbjct: 437 MITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFI 496
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
++ EPG +VW AL+S H + E + +++L P + + +SN +A ++W+
Sbjct: 497 KAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWD 556
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
VA VR+ M+ ++KVPG S + +N + H F + DK+H I +L L L M
Sbjct: 557 AVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNMLDDLLLTM 612
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 13/391 (3%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
+L V+ LK+ + + + LG + F+ + ++ Y C + + F+ +Q K+
Sbjct: 29 SLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKN 88
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+ W+S+ING V N EA + +M + D+ + L + ++LG G S+HG
Sbjct: 89 VFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHG 148
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG---L 258
SIR D V S++ MY K G+ D + VF M+ N +W LI+G+A +G
Sbjct: 149 KSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNF 208
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLAC-AQIGFLKLGKSIHGYTVRR-----FDFNL 312
T E + +MQ PD+ ++ S L C +G G+ +H Y V+ D ++
Sbjct: 209 REETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDV 268
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--LQMI 370
LG +IDMYS+ R +FD+M+ R++ SW +I Y +G +EALSLF +Q+I
Sbjct: 269 HLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVI 328
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V+P+ + S+L A S + GR V K ++ ++D+ ++ G +
Sbjct: 329 DG-VEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRK-ELNNEVSLCNALIDMYSKCGSL 386
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ A ++ + S W +++SG H K
Sbjct: 387 DSARRVFEDDSLCKDAISWSSMISGYGLHGK 417
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 200/401 (49%), Gaps = 21/401 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR------KESPFEVLGLYNQMIK 69
I+++Y + +RK+F+E+ +R ++N +I Y+ +E +E + QM
Sbjct: 165 IMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV---KQMQM 221
Query: 70 EDVRPDSSTFTVALKACVSLM-DLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKC 124
++VRPD+ T + L C M G E I + + LG +DV +G ++++Y +
Sbjct: 222 DEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRS 281
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGL 183
K+ F++M+ +++ W++MING V NG EA+ ++ M+ +G++ + V ++ +
Sbjct: 282 NKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSV 341
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-N 242
+ AC+ G +HG+++R+ LN +V + +L+DMY+K G LD A VF++ S +
Sbjct: 342 LPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKD 401
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W ++ISG+ +G + L +M G PD ++ V L AC + G + G +I+
Sbjct: 402 AISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYS 461
Query: 303 YTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHG 359
+ + L + ++DM + G A + S W +++ IHG
Sbjct: 462 SVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDL 521
Query: 360 E--EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
E E FL +E ++ + ++L ++ V E R
Sbjct: 522 EMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVR 562
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 313/613 (51%), Gaps = 74/613 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ Y DI AR +FE+ P+ DT YN++I +S + + L+ +M E +
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 74 PDSSTFTVALKACVSLM--DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK----M 127
PD+ TF L A ++L+ D K + A++ G G V ++++++Y KC +
Sbjct: 146 PDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQ------------------------------ 157
+ A F+++ KD W++M+ G V NG
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 158 --PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
+EA++ +RM GI+ DE +I+ACA G + G VH Y +RR +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 216 TSLVDMYAK-------------------------------TGHLDLASHVFKNMSRINIV 244
SLV +Y K +GH+ A +FK M NI+
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W +ISG A+NG L+L M+ GFEP + A+ +CA +G G+ H
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 305 VR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ FD +L G ++I MY+KCGV AR +F M D +SWN +IA+ G HGHG EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
++ +M++ ++PD T ++L+A SH+GLV++GR +FD M + Y+I P HYA ++DL
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
L R+G+ +A +++S+ +P +W ALLSGC H +G A K+ L P+ G +
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTY 623
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
L+SN A +WEEVA VRK MR G+KK S +E+ ++H F+++D SH + E +
Sbjct: 624 MLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVY 683
Query: 544 YVLKKLYLEMRAI 556
L+ L EMR +
Sbjct: 684 IYLQDLGKEMRRL 696
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 65/296 (21%)
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLME 268
D +T++V Y +G + LA VF+ + + V + A+I+GF+ N S + L +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 269 MQSCGFEPDSVSLVSALLA----------CAQIGFLKLGKSIHGYTVRRFDFNLVLGTSV 318
M+ GF+PD+ + S L C Q L KS GY + ++
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL-KSGAGYITS-------VSNAL 190
Query: 319 IDMYSKCG-VPS---CARALFDQMQSRD-------------------------------- 342
+ +YSKC PS AR +FD++ +D
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
L+++N +I+ Y G +EAL + +M+ + ++ D T+ S++ A + +GL++ G+
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK---- 306
Query: 403 LMVSKYKIQPTEKHY---ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
V Y ++ + + +V L + G+ +EA I + M + L W ALLSG
Sbjct: 307 -QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD-LVSWNALLSG 360
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
++LSA GN+ +I +Y + AR++F +P ++N++I A + E + +
Sbjct: 450 SSLSA-GNA---LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY----GNDVFVGSSMLN 119
Y +M+K+ +RPD T L AC + G + + ++E Y G D + + +++
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF-DSMETVYRIPPGADHY--ARLID 562
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLV-CWSSMINGLVFNGQ 157
L + GK ++A E + K W ++++G +G
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 285/529 (53%), Gaps = 1/529 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K+F + V ++++II +K E ++ +M V P+ T + A
Sbjct: 384 ALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATD 443
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L DL GE I + G+ D V ++++ +Y+K G + + FE +DL+ W+++
Sbjct: 444 LGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNAL 503
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++G N + + +M EG + + + ++++C+ L D G VH ++ L
Sbjct: 504 LSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL 563
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + V T+LVDMYAK L+ A +F + + ++ W +++G+AQ+G ++ ++
Sbjct: 564 DGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQ 623
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGV 327
MQ G +P+ +L S+L C++I L G+ +H ++ ++ + ++++DMY+KCG
Sbjct: 624 MQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGC 683
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +FD + SRD +SWN II Y HG G +AL F M++ PD TF +LSA
Sbjct: 684 VEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSA 743
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH GL+EEG+ F+ + Y I PT +HYACMVD+L RAG+ E ++ M +
Sbjct: 744 CSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVL 803
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
+W +L C H GE+ A K+ +L P+ + L+SN FA + W++V VR M
Sbjct: 804 IWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMS 863
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
G+KK PG S VEVNG++H F+ D SH + +I L+ L+ ++ ++
Sbjct: 864 TRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSV 912
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 236/446 (52%), Gaps = 5/446 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY ++V A ++F +P + ++N+++ +++ +VL L+ +M ++
Sbjct: 270 LVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFS 329
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + LK C + +L+ G+ + A+ +G D F+ ++++Y KCG +A+ F
Sbjct: 330 KFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFV 389
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ D+V WS++I L GQ REA + +KRM+ G+ ++ + L+ A DLGD +
Sbjct: 390 RIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYY 449
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H + D V +LV MY K G + VF+ + ++++W AL+SGF
Sbjct: 450 GESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHD 509
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N + L + +M + GF P+ + +S L +C+ + + LGK +H V+ D N +
Sbjct: 510 NETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV 569
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
GT+++DMY+K A +F+++ RDL +W VI+A Y G GE+A+ F+QM V
Sbjct: 570 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEEA 433
KP+ T AS LS S ++ GR + + Q + A +VD+ A+ G VE+A
Sbjct: 630 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG--QSGDMFVASALVDMYAKCGCVEDA 687
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
+ D + + ++ W ++ G H
Sbjct: 688 EVVFDGLVSRDTVS-WNTIICGYSQH 712
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 208/399 (52%), Gaps = 5/399 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C S DL G+ I + ++ G D + +S++N+Y KCG N A F ++ +D+
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 194
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+++I G V G AV+ + M++EG++A+E ++AC+ D FG VH
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAE 254
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+I+ D+ V ++LVD+YAK G + LA VF M + N V+W AL++GFAQ G A
Sbjct: 255 AIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKV 314
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDM 321
L L M +L + L CA G L+ G+ +H +R + + + ++DM
Sbjct: 315 LNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDM 374
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
YSKCG+ A +F +++ D++SW+ II G EA +F +M + V P+ T
Sbjct: 375 YSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTL 434
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
ASL+SA + G + G V KY + +V + + G V++ ++ ++ +
Sbjct: 435 ASLVSAATDLGDLYYGES-IHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEA-T 492
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
T L W ALLSG H+++ G ++ ++L NP+
Sbjct: 493 TNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPN 531
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 241/466 (51%), Gaps = 9/466 (1%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
NS+ + A G N A K+F E+P R V ++ ++I + + + L+ +M +E
Sbjct: 167 NSLVNVYAKCGSAN---YACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRRE 223
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V + T+ ALKAC +DL+ G+++ +A+++G +D+FVGS++++LY KCG+M A
Sbjct: 224 GVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLA 283
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M +++ V W++++NG G + ++ + RM I+ + + +++ CA+
Sbjct: 284 ERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANS 343
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G+ R G VH +IR LD + LVDMY+K G A VF + ++V+W A+I
Sbjct: 344 GNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAII 403
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+ Q G + E+ M+ G P+ +L S + A +G L G+SIH + F+
Sbjct: 404 TCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFE 463
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++ + +++ MY K G +F+ +RDLISWN +++ + + + L +F QM
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM 523
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ P+ TF S+L + S V+ G+ +V K + + +VD+ A+
Sbjct: 524 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIV-KNSLDGNDFVGTALVDMYAKNRF 582
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+E+A I + + + L W +++G + + GEK K +++
Sbjct: 583 LEDAETIFNRL-IKRDLFAWTVIVAG---YAQDGQGEKAVKCFIQM 624
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 199/385 (51%), Gaps = 6/385 (1%)
Query: 9 YGNSV-GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
Y N+V ++ +Y + ++FE R + ++N+++ + E+ L ++NQM
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM 523
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ E P+ TF L++C SL D+ +G+++ + V+ + FVG++++++Y K +
Sbjct: 524 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 583
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+A F ++ ++DL W+ ++ G +GQ +AV + +M++EG+ +E + + C
Sbjct: 584 EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGC 643
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ + G +H +I+ + D+ V ++LVDMYAK G ++ A VF + + V+W
Sbjct: 644 SRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWN 703
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+I G++Q+G G L+ M G PD V+ + L AC+ +G ++ GK +
Sbjct: 704 TIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKI 763
Query: 308 FDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE--EA 362
+ + ++D+ + G + ++M+ + +++ W ++ + +HG+ E E
Sbjct: 764 YGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGER 823
Query: 363 LSLFLQMIETMVKPDHSTFASLLSA 387
++ L +E + ++ +++ +A
Sbjct: 824 AAMKLFELEPEIDSNYILLSNMFAA 848
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 165/313 (52%), Gaps = 13/313 (4%)
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G+++ CA GD G ++HG I+ +N D + SLV++YAK G + A VF +
Sbjct: 133 GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 192
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W ALI+GF G + L EM+ G E + + +AL AC+ L+ GK +H
Sbjct: 193 DVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVH 252
Query: 302 GYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ DF +L +G++++D+Y+KCG A +F M ++ +SWN ++ + G E
Sbjct: 253 AEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAE 312
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ L+LF +M + + T +++L ++SG + G+ L + + + E C+
Sbjct: 313 KVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAI-RIGCELDEFISCCL 371
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK------ 474
VD+ ++ G +ALK+ + +P + W A+++ C + K S + A +V K
Sbjct: 372 VDMYSKCGLAGDALKVFVRIE-DPDVVSWSAIIT-CLDQKGQS---REAAEVFKRMRHSG 426
Query: 475 LNPDDLGIHALVS 487
+ P+ + +LVS
Sbjct: 427 VIPNQFTLASLVS 439
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 289/513 (56%), Gaps = 12/513 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ A +F+ +P R + ++N++I YS+ E L+ Q+++ +
Sbjct: 319 LIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCS 378
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST L +C S L+ GE I ++LG+ N+ +S++ +Y+ CG + + F
Sbjct: 379 LSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL---VACFS 435
Query: 136 KMQR----KDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
+Q D+VCW++++ G NG EA+ A+ M+++ + D V + +I AC +L
Sbjct: 436 LLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNL 495
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G S+HG +++ + D++VQ +L+ MY + G ++ A +F N+ +W +I
Sbjct: 496 ELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMI 555
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
S F+QN LEL ++ FEP+ +++V L AC Q+G L+ GK IHG+ +R R
Sbjct: 556 SAFSQNKDGRRALELFCHIE---FEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQ 612
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N + ++ DMYS CG A +F R + +WN +I+++G H +G +A+ LF +M
Sbjct: 613 GNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEM 672
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
E +P STF SLLSA SHSGLV EG +++ M+ + ++ +H+ CMVD+L RAG
Sbjct: 673 RECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGR 732
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ EA + + M T+P VW ALLS C H +G +VA+ + +L P+++G + +SN
Sbjct: 733 LGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNM 792
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ +W++ +R+ ++ G+KK YS+++V
Sbjct: 793 YVAAGRWKDAVELRRIIQDKGLKKPAAYSLIDV 825
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 246/472 (52%), Gaps = 16/472 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y D S+ LF+E+ R V +N++I A + + L+ +++ E V D
Sbjct: 13 LLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVGLD 72
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + + A + +L G + + + G +D F+ ++++++Y KCG+++ + F
Sbjct: 73 STTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFG 132
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ +D++ W+SM+ G +N P++++ +K+M AD V + + A A LG+ F
Sbjct: 133 GMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSF 192
Query: 196 GLSVHGYSIRRHLNLDV---KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG+ I+ D+ + SL+ +Y++ + A +FK M +IV+W A++ G
Sbjct: 193 GQVIHGWGIKLGYK-DISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDG 251
Query: 253 FAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---F 308
A N +LL EMQ G +PDSV++V + CA++ L+ G+++HG T+RR
Sbjct: 252 LALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGL 311
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
DF++ S+IDMYSKC A +F + RDL+SWN +I+ Y +GH EA LF Q
Sbjct: 312 DFSVT--NSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQ 369
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLAR 426
++++ + ST ++L + S ++ G + + K+ A ++ +
Sbjct: 370 LLQSYSQCSLSTLLAILPSCDSSEFLQFGE---SIHCWQLKLGFANNPLAVNSLMLMYIN 426
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
G++ ++ ++S + W +++GC + F K A +++ +PD
Sbjct: 427 CGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALK-AFNLMRQDPD 477
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+S+L Y + + + F+++ +D++ W++MI V N AV+ + + EG+
Sbjct: 11 TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 70
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D ++ ++ A + +G+ G +HG S + L D + +L+DMYAK G L + V
Sbjct: 71 LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F M +I++W +++ G A N +L +M + D+VSL A+ A A +G L
Sbjct: 131 FGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGEL 190
Query: 295 KLGKSIHGYTVRRFDFNL---VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G+ IHG+ ++ ++ S+I +YS+C A LF +M+ +D++SWN ++
Sbjct: 191 SFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLD 250
Query: 352 SYGIHGHGEEALSLFLQM-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
++ EA L +M + V+PD T ++ + L+ EGR L + + ++
Sbjct: 251 GLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRR-EM 309
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ ++ +V+ A + ++ E L W A++SG
Sbjct: 310 GLDFSVTNSLIDMYSKCKDVKRAEHVFKAI-PERDLVSWNAMISG 353
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L TS++ YS+ S + ALFD++ RD+I WN +I + + A++LF++++
Sbjct: 6 HLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELM 65
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAG 428
V D +T ++SA SH G + +GR + +K + C ++D+ A+ G
Sbjct: 66 GEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGI---SFKTGLLSDSFLCNALIDMYAKCG 122
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSI 464
E+ + + M ++ W +++ GC +N+ K S+
Sbjct: 123 ELSSSECVFGGMEYRDIIS-WNSMMRGCAYNNYPKKSL 159
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 295/541 (54%), Gaps = 1/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I ++ + AR++FEE+P R + ++ ++I E L L+ +M E + PD
Sbjct: 173 VIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPD 232
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S L AC L +K+G + AV G+ +D++V ++++++Y KCG EA F
Sbjct: 233 SVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFS 292
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M D+V WS++I G N +E+ Y M G+ + +V ++ A L +
Sbjct: 293 HMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQ 352
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ L DV V ++L+ MYA G + A +F+ S +I+ W ++I G+
Sbjct: 353 GKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNL 412
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G S + P+ +++VS L C Q+G L+ GK IHGY + N+ +
Sbjct: 413 VGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSV 472
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G S+IDMYSKCG +F QM R++ ++N +I++ G HG GE+ L+ + QM E
Sbjct: 473 GNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGN 532
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF SLLSA SH+GL++ G ++ M++ Y I+P +HY+CMVDL+ RAG+++ A
Sbjct: 533 RPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAY 592
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K + M P V+ +LL C H K + E +A+++L+L DD G + L+SN +A +
Sbjct: 593 KFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGK 652
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+WE+++ VR ++ G++K PG S ++V ++ F H + I L L L M+
Sbjct: 653 RWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMK 712
Query: 555 A 555
+
Sbjct: 713 S 713
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 235/455 (51%), Gaps = 9/455 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ +Y + A F LP + + +N+I+ + + Y+ M++ V P
Sbjct: 72 QLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTP 131
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVA 133
D+ T+ + LKAC SL L++G W G +V+V ++++++ KCG + +A
Sbjct: 132 DNYTYPLVLKACSSLHALQLGR--WVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE+M +DL W+++I G ++NG+ EA+ +++M+ EG+ D V++ ++ AC L
Sbjct: 190 FEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAV 249
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G+++ ++R D+ V +++DMY K G A VF +M ++V+W LI+G+
Sbjct: 250 KLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGY 309
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+QN L + +L + M + G +++ S L A ++ LK GK +H + ++ ++
Sbjct: 310 SQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDV 369
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
V+G+++I MY+ CG A ++F+ +D++ WN +I Y + G E A F ++
Sbjct: 370 VVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGA 429
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+P+ T S+L + G + +G+ V+K + ++D+ ++ G +E
Sbjct: 430 EHRPNFITVVSILPICTQMGALRQGKE-IHGYVTKSGLGLNVSVGNSLIDMYSKCGFLEL 488
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
K+ M + + ++S C +H + GEK
Sbjct: 489 GEKVFKQMMVR-NVTTYNTMISACGSHGQ---GEK 519
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 180/343 (52%), Gaps = 4/343 (1%)
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
S ++N+YV G + A + F + K ++ W++++ GLV G +A+ Y M + G+
Sbjct: 70 ASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGV 129
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D +++AC+ L + G VH ++ +V VQ +++DM+AK G ++ A
Sbjct: 130 TPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARR 188
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
+F+ M ++ +W ALI G NG L L +M+S G PDSV + S L AC ++
Sbjct: 189 MFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEA 248
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+KLG ++ VR F+ +L + +VIDMY KCG P A +F M D++SW+ +IA
Sbjct: 249 VKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAG 308
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y + +E+ L++ MI + + S+L AL L+++G+ + ++ + +
Sbjct: 309 YSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSD 368
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A +V + A G ++EA I + S + + VW +++ G
Sbjct: 369 VVVGSALIV-MYANCGSIKEAESIFECTS-DKDIMVWNSMIVG 409
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 269/492 (54%), Gaps = 35/492 (7%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L++C +L LK+ I + DVF S ++++ + ++ A F ++Q +L
Sbjct: 22 LESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
++S I G + P ++ Y + K+ G+ D + L++AC G G+ HG
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI--------------------- 241
IR + DV VQ SLV MY+ G + AS+VF+ +S +
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198
Query: 242 ----------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
N+VTW +ISG+A+N +EL +QS G + +VS + +CA +
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258
Query: 292 GFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
G L+LG+ H Y +R + NL+LGT+++DMY++CG A +FDQ+ RD +SW +I
Sbjct: 259 GALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLI 318
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A + +HG+ E+AL F +M + + P TF ++LSA SH GLVE G F+ M Y+I
Sbjct: 319 AGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRI 378
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+P +HY CMVDLL RAG++ EA K V+ M +P +W ALL C HK I E+ K
Sbjct: 379 EPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGK 438
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
+++L P+ G + L+SN +A KWE V +R+ M++ G+ K PGY++ E++G++H F
Sbjct: 439 TLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFT 498
Query: 531 MEDKSHNQYEDI 542
+ DK+H + + I
Sbjct: 499 IGDKTHPEIQQI 510
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 194/407 (47%), Gaps = 36/407 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++ KN + A ++F ++ + YNS I +S + P + Y Q + + PD
Sbjct: 53 LISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPD 112
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T+ +KAC L MG + + + G+ +DV+V +S++ +Y G + A F
Sbjct: 113 NLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFR 172
Query: 136 KMQRKDLVCWSSMINGLV-----------FNGQPR--------------------EAVDA 164
++ D+V W+SM+ G + F+ P +A++
Sbjct: 173 RISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIEL 232
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
Y ++ EG+ A+E VM+ +I +CA LG G H Y +R + +++ + T+LVDMYA+
Sbjct: 233 YFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYAR 292
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G +D A VF + + ++W LI+GFA +G A LE M+ G P ++ +
Sbjct: 293 CGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAV 352
Query: 285 LLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR- 341
L AC+ G ++ G + R R + L ++D+ + G + A ++M +
Sbjct: 353 LSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKP 412
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ W ++ + IH + E A +IE +KP+HS + LLS +
Sbjct: 413 NAPIWGALLGACRIHKNSEIAERAGKTLIE--LKPEHSGYYVLLSNI 457
>gi|449443185|ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 288/510 (56%), Gaps = 15/510 (2%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI AR +F+++ R V +NS+I Y F L +Y +M ++ PD TF LK
Sbjct: 54 DIEYARTVFDQINQRTVYIWNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLK 113
Query: 85 ACVSLMDLKM-GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
C S++DL + G+ + + V+ G+ DV+ S +LN+YV CG +N + FE + + ++V
Sbjct: 114 VC-SIIDLLVYGQSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVV 172
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W+S+I G V N QP+EA+ +K M+ EG++ +E+ M + A A D G VH
Sbjct: 173 AWTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDR- 231
Query: 204 IRRHLNLD---------VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
R L D V + T+++DMYAK G L A ++F M + N+V W ++IS ++
Sbjct: 232 -LRQLGFDPFDTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYS 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
Q G L L ++M+ GF P+ + +S + AC +GF G+S+H +R F +
Sbjct: 291 QYGRGAEALRLFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVA 350
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+GT+++DMY+K G A +F +++ +D+++W +I+ I G G+EAL++F +M E
Sbjct: 351 IGTALMDMYAKAGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEA 410
Query: 374 -VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD T+ ++L A SH GLVEEG+ F M Y I+PT +HY CM+DLL+RAG +E
Sbjct: 411 EVAPDQITYIAVLWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKE 470
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++ M T+P + ++L+GC + + +V +++L G++ L+SN A
Sbjct: 471 AEELLMKMPTQPNATILSSILNGCEMYGNVGLANRVKSHIVELENSSSGVYVLLSNIHAK 530
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
W+E+ R ++ + K G S VE+
Sbjct: 531 ACNWQEMKLARDMLKHKNIGKTLGNSFVEI 560
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 184/342 (53%), Gaps = 16/342 (4%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G + A F+++ ++ + W+SMI G G A+ Y+ M+++G D ++
Sbjct: 53 GDIEYARTVFDQINQRTVYIWNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVL 112
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+ C+ + +G SVH ++ LDV + L++MY G L+ VF+ + + N+V
Sbjct: 113 KVCSIIDLLVYGQSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVV 172
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W +LI+GF N L L +M++ G EP+ +++ +AL A A+ + GK +H
Sbjct: 173 AWTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHD-R 231
Query: 305 VRR--FD-------FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
+R+ FD FN++L T+++DMY+KCG AR LFD+M R+L+ WN +I++Y
Sbjct: 232 LRQLGFDPFDTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQ 291
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR--YWFDLMVSKYKIQPT 413
+G G EAL LF+ M P+ +TF S++SA +H G GR + L S ++
Sbjct: 292 YGRGAEALRLFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAI 351
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+AG+ + ALKI + + +A W ++SG
Sbjct: 352 G---TALMDMYAKAGDADTALKIFSKLRKKDVMA-WTTMISG 389
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 154/301 (51%), Gaps = 10/301 (3%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN 65
L Y +S ++ +Y D+ S K+FE +P V + S+I + + P E L L+
Sbjct: 138 LDVYTSSC--LLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQPKEALRLFK 195
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-------DVFVGSSML 118
M E V P+ T T AL A D+ G+ + + +LG+ +V + ++++
Sbjct: 196 DMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDTNSCFNVILATAIM 255
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KCGK+ A F+KM +++LV W+SMI+ G+ EA+ + M+ G ++
Sbjct: 256 DMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEMAGFVPNKA 315
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ +I AC +G G S+H ++R + V + T+L+DMYAK G D A +F +
Sbjct: 316 TFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIGTALMDMYAKAGDADTALKIFSKL 375
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ +++ W +ISG A G L + M + PD ++ ++ L AC+ +G ++ G
Sbjct: 376 RKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYIAVLWACSHLGLVEEG 435
Query: 298 K 298
+
Sbjct: 436 Q 436
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 143/291 (49%), Gaps = 34/291 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y +V+AR LF+++P R + +NS+I AYS+ E L L+ M P+
Sbjct: 254 IMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEMAGFVPN 313
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF + AC + G + +A+ + V +G++++++Y K G + A+ F
Sbjct: 314 KATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIGTALMDMYAKAGDADTALKIFS 373
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
K+++KD++ W++MI+GL G+ +EA++ ++RM++E + D++ + ++ AC+ LG
Sbjct: 374 KLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYIAVLWACSHLGLVE 433
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G K TS+ ++Y ++ +G +I +
Sbjct: 434 EGQ---------------KQFTSMTEVYGIEPTME---------------HYGCMIDLLS 463
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
+ G + ELLM+M + +P++ L S L C G + L + + V
Sbjct: 464 RAGHSKEAEELLMKMPT---QPNATILSSILNGCEMYGNVGLANRVKSHIV 511
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT--GHLDLASHVFK 236
+M ++ C + + + +H I + ++ + L+D A + G ++ A VF
Sbjct: 7 TVMSFLEKCKTMKELK---QIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYARTVFD 63
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+++ + W ++I G+ G L + EMQ GF PD + L C+ I L
Sbjct: 64 QINQRTVYIWNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLVY 123
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+S+H V+ F+ ++ + +++MY CG + +F+ + ++++W +IA +
Sbjct: 124 GQSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVN 183
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+ +EAL LF M V+P+ T + L+A + + G+ D + + P +
Sbjct: 184 NDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRL-RQLGFDPFDT 242
Query: 416 HYAC--------MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ +C ++D+ A+ G++ A + D M + L VW +++S
Sbjct: 243 N-SCFNVILATAIMDMYAKCGKLVTARNLFDKMP-QRNLVVWNSMISA 288
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 289/530 (54%), Gaps = 1/530 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY DI +A + F V +N +++AY + + E ++ QM E +
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C SL L +GE+I + ++ G+ +V+V S ++++Y K G+++ A
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
++++ +D+V W++MI G + EA+ ++ M+ +GI +D + I ACA +
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQAL 532
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H S + D+ + +LV +YA+ G A F+ + + ++W ALISGF
Sbjct: 533 NQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGF 592
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+G L++ +M G E + + SA+ A A +K GK IH ++ +D
Sbjct: 593 AQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSET 652
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+I +YSKCG A+ F +M ++++SWN +I Y HG+G EA+SLF +M +
Sbjct: 653 EASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQL 712
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P+H TF +LSA SH GLV EG +F M ++ + P +HY C+VDLL RA +
Sbjct: 713 GLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCC 772
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + ++ M EP +W LLS C HK IGE A+ +L+L P+D + L+SN +A+
Sbjct: 773 AREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAV 832
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
KW+ R+ M+ G+KK PG S +EV +HAF + D+ H E I
Sbjct: 833 SGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQI 882
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 256/477 (53%), Gaps = 6/477 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R+I +Y ++ +A KLF+++P V +N +I K+ +VLGL++ MI E+V P
Sbjct: 50 RLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTP 109
Query: 75 DSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D STF L+AC ++ E+I K + G+G+ V + +++LY K G ++ A +
Sbjct: 110 DESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLV 169
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE++ KD V W +MI+GL NG+ EA+ + +M K + V ++ AC +
Sbjct: 170 FERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELF 229
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G +HG+ ++ L+ + V +LV +Y++ G+L A +F M R + +++ +LISG
Sbjct: 230 KLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGL 289
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ G + L+L +MQ +PD V++ S L ACA +G GK +H Y ++ +L
Sbjct: 290 AQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDL 349
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ S++D+Y KC A F ++ +++ WNV++ +YG G+ E+ +FLQM
Sbjct: 350 IIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIE 409
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P+ T+ S+L + G ++ G V K Q + ++D+ A+ GE++
Sbjct: 410 GLMPNQYTYPSILRTCTSLGALDLGEQ-IHTQVIKSGFQFNVYVCSVLIDMYAKHGELDT 468
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
A I+ + E + W A+++G H F+ K+ +++ + D++G + +S
Sbjct: 469 ARGILQRLREED-VVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAIS 524
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 243/460 (52%), Gaps = 3/460 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K LS+ ++ LY ++++A ++F ++ R +YNS+I +++
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M + ++PD T L AC S+ G+++ +++G +D+ + S+L+L
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVKC + A F + +++V W+ M+ G E+ + +M+ EG+ ++
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++ C LG G +H I+ +V V + L+DMYAK G LD A + + +
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V+W A+I+G+ Q+ L L+L EM++ G D++ SA+ ACA I L G+ I
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 301 HGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + + + +L +G +++ +Y++CG A F+++ ++D ISWN +I+ + GH
Sbjct: 539 HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHC 598
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EEAL +F QM + V+ + TF S +SA +++ +++G+ +M+ TE
Sbjct: 599 EEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNV- 657
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++ L ++ G +E+A + M E + W A+++G H
Sbjct: 658 LITLYSKCGSIEDAKREFFEM-PEKNVVSWNAMITGYSQH 696
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 224/443 (50%), Gaps = 7/443 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + A+ +FE L L+ ++ ++I S+ E + L+ QM K V P
Sbjct: 153 LIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPT 212
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ L AC + K+GE++ V+ G ++ FV ++++ LY + G + A F
Sbjct: 213 PYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM R+D + ++S+I+GL G A+ +++M+ + + D V + L+ ACA +G
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y I+ ++ D+ ++ SL+D+Y K ++ A F N+V W ++ + Q
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G + + ++MQ G P+ + S L C +G L LG+ IH ++ F FN+ +
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G AR + +++ D++SW +IA Y H EAL LF +M +
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVEE 432
+ D+ F+S +SA + + +G+ + Y +E +V L AR G ++
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQ---QIHAQSYISGYSEDLSIGNALVSLYARCGRAQD 569
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A + + + ++ W AL+SG
Sbjct: 570 AYLAFEKIDAKDNIS-WNALISG 591
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 204/445 (45%), Gaps = 39/445 (8%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M + +R + T+ + C + L +++ + + G+ + +GS ++++Y+ G+
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++ A+ F+ + ++ W+ +I+GL+ + + + M E + DE +++A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 187 CADLGDSRFGLS--VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
C+ G + F ++ +H I V L+D+Y+K GH+DLA VF+ + + V
Sbjct: 121 CSG-GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W A+ISG +QNG + L +M P S L AC +I KLG+ +HG+
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239
Query: 305 VR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
V+ + +++ +YS+ G A +F +M RD IS+N +I+ G + AL
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSG--------------------LVEEGRYWFDL 403
LF +M +KPD T ASLLSA + G L+ EG DL
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL-LDL 358
Query: 404 MVSKYKIQPTEKHY-----------ACMVDLLARAGEVEEALKIVDSMSTE---PGLAVW 449
V + I+ +++ M+ + G + E+ I M E P +
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLK 474
++L C + +GE++ +V+K
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIK 443
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 154/328 (46%), Gaps = 14/328 (4%)
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M++ GI A+ + L + C + G +H + + + + + L+D+Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+D A +F ++ N+ W +ISG LA L L M + PD + S L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 288 CA-QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
C+ ++ + IH + F + ++ +ID+YSK G A+ +F+++ +D +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I+ +G +EA+ LF QM ++ V P F+S+LSA + L + G +V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 406 SKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC----HNH 459
K + + + C +V L +R G + A +I M ++ + +L+SG +
Sbjct: 241 ---KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS-YNSLISGLAQRGFSD 296
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVS 487
+ + EK+ +K PD + + +L+S
Sbjct: 297 RALQLFEKMQLDCMK--PDCVTVASLLS 322
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 300/534 (56%), Gaps = 3/534 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT L + N ++ +YG + ++ K+FE +P R ++NS I + +V
Sbjct: 203 VLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDV 262
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ M + P S T + L A V L +G E+ +++ D+FV +S++++
Sbjct: 263 LALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDM 322
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G + +A FEK++ +++V W++MI LV NG EA +M+K+G + + +
Sbjct: 323 YAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITL 382
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ L+ AC+ + + G +H +SIR L D+ + +L+DMYAK G L LA +F ++S
Sbjct: 383 VNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSE 441
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V++ LI G++Q+ + +L L ++ S G E D++S + AL AC + K GK I
Sbjct: 442 KDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEI 501
Query: 301 HGYTVRRFDFN-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG VRR N L +++ +Y+K G+ A +F++++ +D+ SWN +I YG+HG
Sbjct: 502 HGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQI 561
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ A LF M + V DH ++ ++LS SH GLVE G+ +F M+++ ++P + HYAC
Sbjct: 562 DAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYAC 620
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL R+G++ E+++I+ M VW ALL C H + + A + +L P+
Sbjct: 621 MVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEH 680
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
G ++++ N +A +W E +R M+ ++K P YS V+ +L AF++ D
Sbjct: 681 SGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 223/434 (51%), Gaps = 26/434 (5%)
Query: 20 YGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSS 77
Y +D+ S+R L PLR +NS+ A S P E L +YN M++ V PD
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75
Query: 78 TFTVALKACVSLMDLKM--GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF AL A + G E+ A+ G+ DVF G++++ Y CG +A F+
Sbjct: 76 TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD 135
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D+V W+S+++ + N +A A M + G+ + ++ ++ AC + F
Sbjct: 136 EMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGF 195
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VHG ++ L+ V + +LVDMY K GH++ + VF+ M N V+W + I F
Sbjct: 196 GLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLN 255
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
GL G L L M GF P S++L S L A ++G+ LG+ +HGY+++R + ++ +
Sbjct: 256 AGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFV 315
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S++DMY+K G A A+F++++ R+++SWN +IA+ +G EA L ++M +
Sbjct: 316 ANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGE 375
Query: 375 KPDHSTFASLLSALSHSGLVEEGRY---W-------FDLMVSKYKIQPTEKHYACMVDLL 424
P+ T +LL A S ++ G+ W FDL +S ++D+
Sbjct: 376 CPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISN-----------ALIDMY 424
Query: 425 ARAGEVEEALKIVD 438
A+ G++ A I D
Sbjct: 425 AKCGQLRLAQSIFD 438
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 294/541 (54%), Gaps = 34/541 (6%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++N++I ++ P L LY MI + P+S TF K+C + G++I +
Sbjct: 45 SWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQI 104
Query: 103 VELGYGNDVFVGSSMLNLYVKCG-------------------------------KMNEAM 131
++ G D+ V +S++++Y + G M++A
Sbjct: 105 LKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQ 164
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+++ KD+V W++MI+G G+ +EA++ + M K + DE M ++ C G
Sbjct: 165 KMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSG 224
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G +H + ++K+ +L+D+Y+K G ++ A +F+ + ++++W LI
Sbjct: 225 NVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIG 284
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-- 309
G+A L + EM G P+ V+++S L ACA +G + +G+ IH Y ++
Sbjct: 285 GYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGI 344
Query: 310 -FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N L TS+IDMY+KCG A +FD + ++ L S N +I + +HG + A L +
Sbjct: 345 ITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSR 404
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M + ++PD TF LLSA SH+GL + GR F M Y+I+P +HY CM+DLL R+G
Sbjct: 405 MKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSG 464
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+EA ++++SM+ EP +W +LL C HK +GE +A+K++K+ P + G + L+SN
Sbjct: 465 LFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSN 524
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+A +W++VA VR + G+KKVPG S +E++ +H F++ DK H Q ++I +L++
Sbjct: 525 IYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEE 584
Query: 549 L 549
+
Sbjct: 585 I 585
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 193/350 (55%), Gaps = 5/350 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + ++ A+K+F+E+P++ V ++N++I Y+ E L L+N+M+K DV+PD
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST L C ++++G +I G+G+++ + +++++LY KCG+M A FE
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q KD++ W+++I G + +EA+ ++ M K G ++V M+ ++ ACA LG
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329
Query: 196 GLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y ++ + + +QTSL+DMYAK G+++ A+ VF + ++ + A+I GF
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFN 311
A +G A + +LL M+ G EPD ++ V L AC+ G LG+ I R +
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
L +ID+ + G+ A L + M D + W ++ + IH + E
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLE 499
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 189/394 (47%), Gaps = 38/394 (9%)
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A+ F+ +Q + + W++MI G + P A++ Y M G+ + L ++CA
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT------------------------ 225
++ G +H ++ L +D+ V TSL+ MYA+
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 226 -------GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
G++D A +F + ++V+W A+ISG+A+ G LEL EM +PD
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
++ + L C G ++LG+ IH + F NL L ++ID+YSKCG A LF+
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+Q +D+ISWN +I Y H +EAL +F +M++ P+ T S+L A +H G ++ G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330
Query: 398 RYWFDLMVSK--YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
R W + + K I ++D+ A+ G +E A ++ D++ + L+ A++ G
Sbjct: 331 R-WIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNK-SLSSCNAMIFG 388
Query: 456 CHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
H + + ++ K + PDD+ L+S
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 140/292 (47%), Gaps = 46/292 (15%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L A VFK++ N ++W +I G A + S L L + M S G P+S + +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVP------------------ 328
CA+ + GK IH ++ +L + TS+I MY++ G+
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 329 -------------SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
A+ +FD++ +D++SWN +I+ Y G +EAL LF +M++ VK
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 376 PDHSTFASLLSALSHSGLVEEGRY---WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD ST A++LS +HSG VE GR W D + K ++DL ++ GE+E
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWID----NHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCH--NHKKFSIGEKVAKKVLKL--NPDDL 480
A + + + + ++ W L+ G NH K ++ V +++LKL P+D+
Sbjct: 264 AHGLFEGLQYKDVIS-WNTLIGGYAYINHHKEAL--LVFQEMLKLGETPNDV 312
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY ++ A LFE L + V ++N++I Y+ E L ++ +M+K
Sbjct: 248 VNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGE 307
Query: 73 RPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
P+ T L AC L + +G ++ G + + +S++++Y KCG + A
Sbjct: 308 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ + K L ++MI G +G+ A D RMKK+GI+ D++ +GL+ AC
Sbjct: 368 NQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSAC--- 424
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSL------VDMYAKTGHLDLASHVFKNMS-RINI 243
S GLS G I + + LD +++ L +D+ ++G A + +M+ +
Sbjct: 425 --SHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482
Query: 244 VTWGALI 250
V WG+L+
Sbjct: 483 VIWGSLL 489
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 309/579 (53%), Gaps = 37/579 (6%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +++ Y N +V A + E + +N +I +Y R + L Y QM+K+ +
Sbjct: 212 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 271
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD+ T+ LKAC +DL G+E+ + V ++++++Y KCGK+ A
Sbjct: 272 RPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARD 331
Query: 133 AFEKMQRKDLVCWSSMIN-----------------------------------GLVFNGQ 157
F+K+ +D V W+SMI+ G + G
Sbjct: 332 LFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGN 391
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
+ A++ +M+K G D V ++ + AC+ +GD++ G +H ++IR V+ S
Sbjct: 392 YKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNS 451
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ MY++ L A +F+ M ++++W ++ISG + LL EM G EP+
Sbjct: 452 LITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPN 511
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALF 335
V++ S L CA++ L+ GK H Y RR DF +L+L +++DMY++ G AR +F
Sbjct: 512 YVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVF 571
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D + RD +++ +IA YG+ G G+ AL LF +M +KPDH T ++LSA SHSGLV
Sbjct: 572 DMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVT 631
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+G+ F+ M S Y + P +H+ACM DL RAG + +A +I+ +M +P A+W L+
Sbjct: 632 QGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 691
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H+ IGE A+K+L++ P++ G + L++N +A W ++A VR MR G++K P
Sbjct: 692 CRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAP 751
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G + V+V F+++D S+ ++I +L+ L + ++
Sbjct: 752 GCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVIK 790
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 185/403 (45%), Gaps = 40/403 (9%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P SS L +C + L G ++ + LG+ + ++ Y + +A
Sbjct: 174 VHPISSL----LSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAH 229
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
V E W+ +I+ V NG ++A+ AYK+M K+GI D +++AC +
Sbjct: 230 VITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEEL 289
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D FG VH + + V +L+ MY K G + +A +F + + V+W ++IS
Sbjct: 290 DLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMIS 349
Query: 252 GFAQ--------------------------NGLAG---------STLELLMEMQSCGFEP 276
+A N +AG LELL +M+ G
Sbjct: 350 VYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHL 409
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
DSV+L+ L AC+ IG KLGK IH + +R F + S+I MYS+C A LF
Sbjct: 410 DSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLF 469
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
M+++ LISWN II+ EEA L +M+ + ++P++ T AS+L + ++
Sbjct: 470 QLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQ 529
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
G+ + M + + + +VD+ AR+G+V EA ++ D
Sbjct: 530 HGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFD 572
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 162 VDAYK-----RMKKEGIDADEVV--MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+DA+K R+ D +V + L+ +C D+ G +HG+ I +
Sbjct: 152 LDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 211
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
LV Y+ L A + +N + ++ W LIS + +NG L +M G
Sbjct: 212 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 271
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARA 333
PD+ + S L AC + L GK +H R ++L++ ++I MY KCG AR
Sbjct: 272 RPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARD 331
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
LFD++ RD +SWN +I+ Y G EA LF M
Sbjct: 332 LFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSM 367
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 295/536 (55%), Gaps = 19/536 (3%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
+ V YN++I + P L LYNQM + PD TF ++AC D + +I
Sbjct: 95 KNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKI 154
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
++G DVFVGS+++N Y+K + EA FE++ +D+V W++M+NG G+
Sbjct: 155 HGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRF 214
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
EA+ ++RM G+ + G++ + +GD G +VHG+ + V V +L
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL 274
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPD 277
+DMY K + A VF+ M I+I +W +++S + G TL L M S +PD
Sbjct: 275 IDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPD 334
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR----------FDFNLVLGTSVIDMYSKCGV 327
V++ + L AC + L G+ IHGY V FD +++L +++DMY+KCG
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD-DVLLNNALMDMYAKCGN 393
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR +F M+ +D+ SWN++I YG+HG+G EAL +F +M + + P+ +F LLSA
Sbjct: 394 MRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSA 453
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+G+V+EG + M SKY + P+ +HY C++D+L RAG++ EA +V +M +
Sbjct: 454 CSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPV 513
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
W +LL+ C H + E A KV++L PD G + L+SN + + ++EEV R TM+
Sbjct: 514 GWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMK 573
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGH 563
+ +KK PG S +E+ +H FI D++H Q E I Y + ++++ LQ H
Sbjct: 574 QQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYI-------YAGLNSLTAVLQEH 622
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 14/393 (3%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM--V 132
D T L++C +L G+E+ ++ + +S++N+Y KC ++ ++
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F K++ ++++I G + N P+ A+ Y +M+ GI D+ +I+AC D D
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDD 147
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+HG + L LDV V ++LV+ Y K + A VF+ + ++V W A+++G
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNG 207
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
FAQ G L + M G P ++ L + +G G+++HG+ + ++
Sbjct: 208 FAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESG 267
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI- 370
+V+ ++IDMY KC A ++F+ M D+ SWN I++ + G L LF +M+
Sbjct: 268 VVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMG 327
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--------CMVD 422
+ V+PD T ++L A +H + GR MV + E H ++D
Sbjct: 328 SSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVN-GLAKEESHDVFDDVLLNNALMD 386
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ A+ G + +A + +M E +A W +++G
Sbjct: 387 MYAKCGNMRDARMVFVNMR-EKDVASWNIMITG 418
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 180/383 (46%), Gaps = 18/383 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++FEELP+R V +N+++ +++ E LG++ +M V P T T L
Sbjct: 186 AYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSV 245
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ D G + ++GY + V V ++++++Y KC + +A+ FE M D+ W+S+
Sbjct: 246 MGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSI 305
Query: 149 INGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
++ G + + RM + D V + ++ AC L G +HGY +
Sbjct: 306 MSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNG 365
Query: 208 LNL--------DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
L DV + +L+DMYAK G++ A VF NM ++ +W +I+G+ +G
Sbjct: 366 LAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYG 425
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TS 317
G L++ M P+ +S V L AC+ G +K G ++ + + T
Sbjct: 426 GEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTC 485
Query: 318 VIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
VIDM + G A L M + D + W ++A+ +H + A ++IE ++P
Sbjct: 486 VIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIE--LEP 543
Query: 377 DHSTFASLLSALSHSGLVEEGRY 399
DH L+S + G+V GRY
Sbjct: 544 DHCGNYVLMSNV--YGVV--GRY 562
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
+I +YG + A +FE + + ++NSI+ + R + L L+++M+ V+P
Sbjct: 274 LIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQP 333
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG--------NDVFVGSSMLNLYVKCGK 126
D T T L AC L L G EI V G +DV + ++++++Y KCG
Sbjct: 334 DLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGN 393
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M +A + F M+ KD+ W+ MI G +G EA+D + RM + + +E+ +GL+ A
Sbjct: 394 MRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSA 453
Query: 187 CADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIV 244
C+ G + GL + + ++ ++ T ++DM + G L A + M + + V
Sbjct: 454 CSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPV 513
Query: 245 TWGALIS 251
W +L++
Sbjct: 514 GWRSLLA 520
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 299/544 (54%), Gaps = 9/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + LFE + + + ++ SII ++++ E L ++ +MI E P
Sbjct: 193 LVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHP 252
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F A +AC ++ + GE+I +++ D++VG S+ ++Y + ++ A VAF
Sbjct: 253 NEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAF 312
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ DLV W+S++N G EA+ + M+ G+ D + + GL+ AC
Sbjct: 313 YRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 372
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y ++ L+ DV V SL+ MYA+ L A VF + ++VTW ++++ A
Sbjct: 373 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 432
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV- 313
Q+ L+L + D +SL + L A A++G+ ++ K +H Y F LV
Sbjct: 433 QHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYA---FKAGLVD 489
Query: 314 ---LGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L ++ID Y+KCG A LF+ M +RD+ SW+ +I Y G+ +EAL LF +M
Sbjct: 490 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRM 549
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++P+H TF +L+A S G V EG Y++ +M +Y I PT +H +C+VDLLARAG+
Sbjct: 550 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 609
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ EA +D M EP + +W LL+ H +G++ A+ +L ++P + L+ N
Sbjct: 610 LTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNI 669
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A W E A ++K MR SG+KK PG S V++ GEL FI+ED+SH + E+I +L+ +
Sbjct: 670 YAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELI 729
Query: 550 YLEM 553
+EM
Sbjct: 730 GMEM 733
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 238/455 (52%), Gaps = 15/455 (3%)
Query: 10 GNSV--GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
GN+V +I +YG SAR++F+E+P R ++ S+I A+ + + LGL++ M
Sbjct: 84 GNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSM 143
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
++ D A++AC L D+ G ++ A++ G+D+ V ++++ +Y K G +
Sbjct: 144 LRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLV 203
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQA 186
++ + FE+++ KDL+ W S+I G G EA+ +++M EG +E +A
Sbjct: 204 DDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRA 263
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C +G +G +HG SI+ L+ D+ V SL DMYA+ +LD A F + ++V+W
Sbjct: 264 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSW 323
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++++ ++ GL L L EM+ G PD +++ L AC L G+ IH Y V+
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 383
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D ++ + S++ MY++C S A +F +++ +D+++WN I+ + H H EE L L
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 443
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDL-MVSKYKIQPTEKHYACM 420
F + ++ D + ++LSA + G E + Y F +V + T +
Sbjct: 444 FSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT------L 497
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+D A+ G +++A+++ + M + W +L+ G
Sbjct: 498 IDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVG 532
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 200/394 (50%), Gaps = 13/394 (3%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAV-------ELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ + AC L L G + R V + + +G+ ++ +Y +C + A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++M ++ V W+S+I V NG+ +A+ + M + G AD+ + ++AC +LG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D G VH ++++ D+ VQ +LV MY+K G +D +F+ + ++++WG++I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 252 GFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
GFAQ G L++ +M G P+ SA AC +G + G+ IHG +++ R D
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L +G S+ DMY++ AR F ++++ DL+SWN I+ +Y + G EAL LF +M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ ++PD T LL A + GR +V K + ++ + AR +
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLV-KLGLDGDVSVCNSLLSMYARCSD 405
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGC--HNHKK 461
+ A+ + + + + W ++L+ C HNH +
Sbjct: 406 LSSAMDVFHEIKDQD-VVTWNSILTACAQHNHPE 438
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 132/257 (51%), Gaps = 7/257 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + ++++Y +D+ SA +F E+ + V T+NSI+ A ++ P EV
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L++ + K + D + L A L +M +++ A + G +D + +++++
Sbjct: 441 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500
Query: 121 YVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG +++AM FE M +D+ WSS+I G G +EA+D + RM+ GI + V
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVT 560
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ---TSLVDMYAKTGHLDLASHVFK 236
+G++ AC+ +G G + YSI V + + +VD+ A+ G L A++
Sbjct: 561 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 237 NMS-RINIVTWGALISG 252
M +I+ W L++
Sbjct: 619 QMPFEPDIIMWKTLLAA 635
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 295/552 (53%), Gaps = 38/552 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F+ + + +N++ ++ P L LY MI + PDS TF LK+C
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE-----------------AM 131
K G++I ++LG+ D++V +S++++Y + G++ + A+
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 132 VA--------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDAD 176
+A F+++ KD+V W++MI+G V G +EA++ +K M + D
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
E M+ ++ ACA G VH + ++K+ +L+D+Y+K G ++ A +F
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+ ++++W LI G+ L L L EM G P+ V+++S L ACA +G + +
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 341
Query: 297 GKSIHGYTVRRFDFNLV----LGTSVIDMYSKCGVPSCARALFD-QMQSRDLISWNVIIA 351
G+ IH Y ++ + L TS+IDMY+KCG A+ +FD M +R L +WN +I+
Sbjct: 342 GRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMIS 401
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
+ +HG A +F +M ++PD TF LLSA SHSG+++ GR F M Y+I
Sbjct: 402 GFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEIT 461
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
P +HY CM+DLL +G +EA +++++M EP +W +LL C H +GE AKK
Sbjct: 462 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKK 521
Query: 472 VLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-KKVPGYSVVEVNGELHAFI 530
++K+ P + G + L+SN +A +W EVA +R + GM KKVPG S +E++ +H FI
Sbjct: 522 LIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFI 581
Query: 531 MEDKSHNQYEDI 542
+ DK H Q +I
Sbjct: 582 IGDKLHPQNREI 593
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 204/381 (53%), Gaps = 10/381 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
+IA Y + I SA+KLF+E+P + V ++N++I Y + E L L+ +M+ +VRP
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D ST + AC +++G + + G+ +++ + +++++LY K G++ A F
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELF 280
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ + KD++ W+++I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 340
Query: 195 FGLSVHGYSIRRHLNLDVKV---QTSLVDMYAKTGHLDLASHVF-KNMSRINIVTWGALI 250
G +H Y ++ + V QTSL+DMYAK G +D A VF +MS ++ TW A+I
Sbjct: 341 IGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMI 400
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
SGFA +G A + ++ M+ G EPD ++ V L AC+ G L LG++I R ++
Sbjct: 401 SGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEI 460
Query: 311 NLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFL 367
L +ID+ G+ A + + M D + W ++ + IHG+ E S
Sbjct: 461 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAK 520
Query: 368 QMIETMVKPDHSTFASLLSAL 388
++I+ ++P +S LLS +
Sbjct: 521 KLIK--IEPGNSGSYVLLSNI 539
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 47/296 (15%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY ++ +A +LF+ L + V ++N++I Y+ E L L+ +M++
Sbjct: 260 VNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 319
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
P+ T L AC L + +G I K ++ N + +S++++Y KCG ++
Sbjct: 320 TPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDA 379
Query: 130 AMVAFE-KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F+ M + L W++MI+G +G+ A D + RM+ GI+ D++ +GL+ AC
Sbjct: 380 AQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSAC- 438
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT--- 245
+ +G LDL ++F++M+R +T
Sbjct: 439 ----------------------------------SHSGMLDLGRNIFRSMTRGYEITPKL 464
Query: 246 --WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+G +I +GL E++ M EPD V S L AC G L+LG+S
Sbjct: 465 EHYGCMIDLLGHSGLFKEAEEMINTMP---MEPDGVIWCSLLKACKIHGNLELGES 517
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 39/492 (7%)
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
+ LG D ++ + +L G N + F + + ++ +++MI+GLV N +E++
Sbjct: 34 LRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESI 93
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+ Y M+KEG+ D L++ACA L DS+ G+ +HG ++ D V TSLV +Y
Sbjct: 94 EIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLY 153
Query: 223 AKTGHLDLASHVFKNMSRIN--------------------------------------IV 244
K G +D A VF ++ N IV
Sbjct: 154 GKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIV 213
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W ++I G+A NGL L+L +M + GF PD ++V L ACA++G L+LG
Sbjct: 214 SWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLM 273
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
R F N VLGT++IDMY+KCG A +F M+ +D++ WN I+ + GH + A
Sbjct: 274 DRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAF 333
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF QM ++ ++PD +TF LL A +H+GLV+EGR +F+ M + + P +HY CMVDL
Sbjct: 334 GLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDL 393
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
L RAG ++EA ++V SM E VW ALL GC H+ + E V K+++ L P + G +
Sbjct: 394 LGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNY 453
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
L+SN ++ KWE+ A +R M + G+KKVPGYS +EV+G +H F++ D SH E I
Sbjct: 454 VLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIY 513
Query: 544 YVLKKLYLEMRA 555
L +L +++A
Sbjct: 514 AKLGELVKDLKA 525
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 186/419 (44%), Gaps = 46/419 (10%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
N V R +G N + ++F + + +N++I +S E + +Y+ M KE
Sbjct: 46 NKVLRFSFNFGNTN---YSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKE 102
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ PDS TF LKAC L+D K+G ++ V+ G +D FV +S+++LY KCG ++ A
Sbjct: 103 GLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNA 162
Query: 131 MVAFEK--------------------------------------MQRKDLVCWSSMINGL 152
F+ M KD+V WSSMI G
Sbjct: 163 FKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGY 222
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
NG P+EA+D + +M EG D M+G++ ACA LG G R +
Sbjct: 223 ASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNP 282
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
+ T+L+DMYAK G +D A VF+ M + +IV W A ISG A +G + L +M+
Sbjct: 283 VLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKS 342
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSC 330
G EPD + V L AC G + G+ R F + ++D+ + G
Sbjct: 343 GIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDE 402
Query: 331 ARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A L M + I W ++ +H + + Q+I ++P +S LLS +
Sbjct: 403 AHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIA--LEPSNSGNYVLLSNI 459
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 295/562 (52%), Gaps = 14/562 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS---RKESP 57
+IK +L ++IA Y N++ SA +F ++P V YN +I AYS + +
Sbjct: 45 LIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNS 104
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
G+ +M + V D+ T+ LK C S L + + + +LG+ D+FV +S
Sbjct: 105 LCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNS 164
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+++ Y +CG + AM F M+ +D+V W+SM+ GLV NG A+ + M + +
Sbjct: 165 LIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSW 224
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++ G +A D F L R D+ +++V Y+K G +D+A +F
Sbjct: 225 NTMLDGFTKAGE--MDKAFKL------FERMAERDIVSWSTMVCGYSKNGDMDMARMLFD 276
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
N+V W +ISG+A+ G + L EM+ G D +S L ACA+ G L L
Sbjct: 277 RCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGL 336
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYG 354
GK +H +R RF + + S IDMY+KCG A +F+ M++ +DL+SWN +I +G
Sbjct: 337 GKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFG 396
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
IHGHGE+++ LF M+ KPD TF LL A +H+GLV EGR +F M Y I P
Sbjct: 397 IHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQI 456
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY CMVDLL R G ++EA +V SM EP + LL C H + V+K + K
Sbjct: 457 EHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFK 516
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
L P D G +L+SN +A W VA VRK M G +K G S +EV E+H F + D
Sbjct: 517 LVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDW 576
Query: 535 SHNQYEDIVYVLKKLYLEMRAI 556
SH + DI ++ +L ++R +
Sbjct: 577 SHPKSGDIYNMIDRLVHDLRQV 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I+ HL+ D + L+ Y+ T +L A +VF + N+ + LI ++ +G
Sbjct: 41 IHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGN 100
Query: 259 AGSTL---ELLMEMQSCGFEPDSVSLVSALLAC-AQIGFLKLGKSIHGYTVR-RFDFNLV 313
++L +L++M G D+ + L C +L L K +H + + F +++
Sbjct: 101 ESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIF 160
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+ID Y +CG A +F M+ RD++SWN ++ +G + AL +F +M E
Sbjct: 161 VPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPER- 219
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D ++ ++L + +G +++ F+ M + + ++ MV ++ G+++ A
Sbjct: 220 ---DRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVS-----WSTMVCGYSKNGDMDMA 271
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ D + L +W ++SG
Sbjct: 272 RMLFDRCPVK-NLVLWTTIISG 292
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 317/606 (52%), Gaps = 67/606 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ Y + D+ S+ + F+ LP R ++ ++I+ Y + + + +M++E + P
Sbjct: 86 VLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPS 145
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG---------- 125
T T L + + L+ G+++ V+LG +V V +S+LN+Y KCG
Sbjct: 146 QFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFD 205
Query: 126 ---------------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+M+ AM FE+M +D+V W+SMI+G G A+D
Sbjct: 206 RMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDM 265
Query: 165 YKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL------------- 210
+ +M ++ + D + ++ ACA+L G +H + + ++
Sbjct: 266 FSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 211 ------------------DVKVQ--TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D+K++ T+L+D Y K G ++ A ++F ++ ++V W A+I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMI 385
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD- 309
G+ Q+GL G + L M P+S +L + L + + L GK IHG V+ +
Sbjct: 386 VGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI 445
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ + ++I MY+K G + A FD ++ RD +SW +I + HGH EEAL LF
Sbjct: 446 YSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ ++PDH T+ + SA +H+GLV +GR +FD+M KI PT HYACMVDL RAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++EA + ++ M EP + W +LLS C +K +G+ A+++L L P++ G ++ ++N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
++ KWEE A +RK+M+ +KK G+S +EV ++HAF +ED H Q +I +KK
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKK 685
Query: 549 LYLEMR 554
++ E++
Sbjct: 686 IWDEIK 691
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 182/414 (43%), Gaps = 67/414 (16%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F +++L+ Y K G M+ + F+++ ++D V W++MI G GQ +A+ M +E
Sbjct: 81 FSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE 140
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------- 224
GI+ + + ++ + A G VH + ++ L +V V SL++MYAK
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 225 ------------------------TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G +DLA F+ M+ +IVTW ++ISG+ Q G
Sbjct: 201 KVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDL 260
Query: 261 STLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L++ +M + PD +L S L ACA + L +G+ IH + V FD + ++ ++
Sbjct: 261 RALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNAL 320
Query: 319 IDMYSKCGVPSCARAL---------------------------------FDQMQSRDLIS 345
I MYS+CG AR L FD ++ RD+++
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVA 380
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I Y HG EA++LF M+ +P+ T A++LS S + G+ V
Sbjct: 381 WTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAV 440
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+I A ++ + A+AG + A + D + E W +++ H
Sbjct: 441 KSGEIYSVSVSNA-LITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 163/373 (43%), Gaps = 73/373 (19%)
Query: 183 LIQACADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+Q + + RF VH I+ L V + +L+++Y+KTG+ A +F M
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 242 NIVTWGALISGFAQNGLAGSTLE-------------------------------LLMEMQ 270
+W ++S +A+ G S+ E ++ EM
Sbjct: 79 TAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMM 138
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G EP +L + L + A L+ GK +H + V+ N+ + S+++MY+KCG P
Sbjct: 139 REGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A+ +FD+M +D+ SWN +IA + G + A++ F QM E D T+ S++S +
Sbjct: 199 MAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGYN 254
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
G +DL +D+ ++ + DSM + P
Sbjct: 255 QRG--------YDLRA---------------LDMFSKM--------LRDSMLS-PDRFTL 282
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
++LS C N +K IGE++ ++ D GI +++ +M + V R+ + +
Sbjct: 283 ASVLSACANLEKLCIGEQIHSHIVTTGFDISGI--VLNALISMYSRCGGVETARRLIEQR 340
Query: 510 GMK--KVPGYSVV 520
G K K+ G++ +
Sbjct: 341 GTKDLKIEGFTAL 353
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 309/579 (53%), Gaps = 37/579 (6%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +++ Y N +V A + E + +N +I +Y R + L Y QM+K+ +
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD+ T+ LKAC +DL G+E+ + V ++++++Y KCGK+ A
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARD 257
Query: 133 AFEKMQRKDLVCWSSMIN-----------------------------------GLVFNGQ 157
F+K+ +D V W+SMI+ G + G
Sbjct: 258 LFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGN 317
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
+ A++ +M+K G D V ++ + AC+ +GD++ G +H ++IR V+ +
Sbjct: 318 YKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNA 377
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ MY++ L A +F+ M +++TW ++ISG + LL EM G EP+
Sbjct: 378 LITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPN 437
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALF 335
V++ S L CA++ L+ GK H Y RR DF +L+L +++DMY++ G AR +F
Sbjct: 438 YVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVF 497
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D + RD +++ +IA YG+ G G+ AL LF +M +KPDH T ++LSA SHSGLV
Sbjct: 498 DMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVT 557
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+G+ F+ M S Y + P +H+ACM DL RAG + +A +I+ +M +P A+W L+
Sbjct: 558 QGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 617
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H+ IGE A+K+L++ P++ G + L++N +A W ++A VR MR G++K P
Sbjct: 618 CRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAP 677
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G + V+V F+++D S+ ++I +L+ L + M+
Sbjct: 678 GCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMK 716
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 209/454 (46%), Gaps = 43/454 (9%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P SS L +C + L G ++ + LG+ + ++ Y + +A
Sbjct: 100 VHPISSL----LSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAH 155
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
V E W+ +I+ V NG ++A+ AYK+M K+GI D +++AC +
Sbjct: 156 VITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEEL 215
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D FG VH + + V +L+ MY K G + +A +F + + V+W ++IS
Sbjct: 216 DLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMIS 275
Query: 252 GFAQ--------------------------NGLAG---------STLELLMEMQSCGFEP 276
+A N +AG LELL +M+ CG
Sbjct: 276 VYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHL 335
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
DSV+L+ L AC+ IG KLGK IH + +R F + ++I MYS+C A LF
Sbjct: 336 DSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLF 395
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
M+++ LI+WN II+ EEA L +M+ ++P++ T AS+L + ++
Sbjct: 396 QLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQ 455
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
G+ + M + + + +VD+ AR+G+V EA ++ D M E + ++++G
Sbjct: 456 HGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFD-MLGERDKMTYTSMIAG 514
Query: 456 CHNHKKFSIGEKVAKKV--LKLNPDDLGIHALVS 487
+ K+ +++ ++ PD + + A++S
Sbjct: 515 YGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLS 548
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 162 VDAYK-----RMKKEGIDADEVV--MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+DA+K R+ D +V + L+ +C D+ G +HG+ I +
Sbjct: 78 LDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 137
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
LV Y+ L A + +N + ++ W LIS + +NG L +M G
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARA 333
PD+ + S L AC + L GK +H R ++L++ ++I MY KCG AR
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARD 257
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
LFD++ RD +SWN +I+ Y G EA LF M
Sbjct: 258 LFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSM 293
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 295/542 (54%), Gaps = 4/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + LFE + + + ++ SII +++ + L ++ +MI E + P
Sbjct: 187 LVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHP 246
Query: 75 DSSTFTVALKAC-VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ F +AC V + L+ GE+I V+ + + G S+ ++Y +C K++ AM
Sbjct: 247 NEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKV 306
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +++ DLV W+S+IN +G EA+ + M+ + D + +M L+ AC
Sbjct: 307 FYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDAL 366
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R G S+H Y ++ L DV V SL+ MY + A VF + ++VTW ++++
Sbjct: 367 RQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTAC 426
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
Q+ +L + S D +SL + L A A++G+ ++ K +H Y + +
Sbjct: 427 VQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDA 486
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+L ++ID Y+KCG A LF+ M + RD+ SW+ +I Y G+ +EAL LF +M
Sbjct: 487 ILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRN 546
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKP+H TF +L A S GLV+EG Y++ +M +Y I PT++H +C++DLLARAG +
Sbjct: 547 LGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLS 606
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA K VD M EP + +W LL+ H +G++ A+ VL ++P + L+ N +A
Sbjct: 607 EAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYA 666
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W E A ++K MR SG++K PG S +++ GEL FI+ED+SH + +++ +L +
Sbjct: 667 SSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGF 726
Query: 552 EM 553
EM
Sbjct: 727 EM 728
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 232/447 (51%), Gaps = 12/447 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG SAR +F+ + R ++ ++I A+++ + +GL++ M++ PD
Sbjct: 86 LITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPD 145
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
A++AC L DL +G ++ +A++ G + V ++++ +Y K G + + FE
Sbjct: 146 EFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFE 205
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDS- 193
+++ KDL W S+I GL G+ +A+ ++ M EG+ +E + +AC+ + +S
Sbjct: 206 RIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSL 265
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+G +HG ++ L+ + SL DMYA+ LD A VF + ++V+W +LI+ F
Sbjct: 266 EYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAF 325
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+ +GL + L EM+ +PD +++++ L AC L+ G+SIH Y V+ ++
Sbjct: 326 SADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDV 385
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ S+I MY++C A +F + RD+++WN I+ + H H E+ LF + +
Sbjct: 386 MVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSS 445
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M D + ++LSA + G E + Y F + + I ++D A+ G
Sbjct: 446 MPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNA-----LIDTYAKCG 500
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
+++A K+ + M T + W +L+ G
Sbjct: 501 SLDDANKLFEIMGTGRDVFSWSSLIVG 527
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 184/385 (47%), Gaps = 14/385 (3%)
Query: 86 CVSLMDLKMGEEIWRKAVELGYG-----NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
C L G + R + G + + + ++ +Y +C + A + F+ M +
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ V W+++I N + +A+ + M + G DE + ++ACA+LGD G VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+I+ + VQ +LV MY+K+G + +F+ + ++ +WG++I+G AQ G
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 261 STLELLMEMQSCGF-EPDSVSLVSALLACA-QIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
L + EM + G P+ S AC+ I L+ G+ IHG V+ + D N G S
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ DMY++C A +F +++S DL+SWN +I ++ G EA+ LF +M + +KPD
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPD 349
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALK 435
T +LL A + +GR +V K+ C ++ + R + A+
Sbjct: 350 GITVMALLCACVGCDALRQGRSIHSYLV---KLGLGGDVMVCNSLISMYTRCLDFPSAMD 406
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHK 460
+ + + + W ++L+ C H+
Sbjct: 407 VFHE-TNDRDVVTWNSILTACVQHR 430
>gi|28558786|gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 296/535 (55%), Gaps = 13/535 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKN--DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
MIKT++ R+I DI AR +F++ V +NS+I Y F
Sbjct: 28 MIKTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQTDQLTVYVWNSMIKGYCNGGDKF 87
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L +Y +M ++ PD TF LK C ++ L G+ + + V+ G+ DV+ S +L
Sbjct: 88 GALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYGQSVHNRIVKTGFELDVYTSSCLL 147
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
N+YV CG +N + FE + + ++V W+S+I G V N QP+EA+ +K M+ EG++ +E+
Sbjct: 148 NMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEI 207
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRR------HLN--LDVKVQTSLVDMYAKTGHLDL 230
M + A A D G V Y +R+ H N +V + T+++DMYAK G L
Sbjct: 208 TMTTALAAAARCRDIHTGKLVR-YRLRQLGLDPFHTNSRFNVILATAIMDMYAKCGKLVT 266
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A ++F M + N+V W ++IS F+Q G L L ++M+ GF P+ + +S + AC
Sbjct: 267 ARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLFVDMELAGFVPNKATFLSVIRACTH 326
Query: 291 IGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+ F G+S+H ++ F + +GT+++DMY+K G A +F +++ +D+++W +
Sbjct: 327 LRFRSTGQSLHARVLKANFHEFVAIGTALMDMYAKSGDADTALKIFSKLRKKDVMAWTTM 386
Query: 350 IASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
I+ I G G+EAL++F +M E V PD T+ ++L A SH GLVEEG+ F M+ Y
Sbjct: 387 ISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYIAVLWACSHLGLVEEGQKHFTSMMEVY 446
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
I+PT +HY CM+DLL+RAG EEA +++ M T+P + ++L+GC + + +V
Sbjct: 447 GIEPTMEHYGCMIDLLSRAGHSEEAEELLVKMPTQPNATILSSILNGCEMYGNVGLANRV 506
Query: 469 AKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+++L G++ L+SN A WEE+ R ++ + K G S VE+N
Sbjct: 507 KSHIVELKNSSSGVYVLLSNIHAKACNWEEMKLARDILKHKKIGKTLGNSFVEMN 561
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 310/580 (53%), Gaps = 26/580 (4%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS ++A Y + A ++F+ +P R V T+NS++ Y L + +M +
Sbjct: 147 GNS---LLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHE 203
Query: 70 E-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
+V+ D AL AC L G E+ + G +DV VG+S+L++Y KCG +
Sbjct: 204 ALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIA 263
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F M + +V W+ MI G N +P EA D + +MK EG + V + L+ ACA
Sbjct: 264 SAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACA 323
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
S +G SVHGY RR V ++T+L++MY+K G + + VF M+ +V+W
Sbjct: 324 QTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNN 383
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-R 307
+I+ + + + L +++ + PD ++ + + A +G L+ + +H Y +R
Sbjct: 384 MIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLG 443
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ N ++ +++ MY++CG +R +FD+M ++D+ISWN +I Y IHG G AL +F
Sbjct: 444 YGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFS 503
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M ++P+ STF S+L+A S SGL +EG F+ M Y + P +HY CM DLL RA
Sbjct: 504 EMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRA 563
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL-----GI 482
G+++E ++ +++M +P VW +LL+ N I E A+++ +L D L G
Sbjct: 564 GDLKEVMQFIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGC 623
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+ L+S+ +A +W++V ++ M + G+++ S+VE++G +F+ D +H Q + I
Sbjct: 624 YVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMI 683
Query: 543 VYVLKKLYLEMRAISSWLQGHMEEHEEHDPLSTAAQYAPT 582
+ +S++L G + E DP++ Q PT
Sbjct: 684 -----------QEVSNFLSGKIGEMR--DPMN---QSDPT 707
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 205/386 (53%), Gaps = 5/386 (1%)
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAM 131
RPD TF V LK C L L G A+ LG DV+ G+S+L Y + G +++A
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
F+ M +D+V W+SM++G V NG A+ ++ M + + D V ++ + AC
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G VH Y IR + DVKV TS++DMY K G + A VF M +VTW +I
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G+A N + ++M++ G + + V+ ++ L ACAQ G+S+HGY RR F
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++VL T++++MYSK G + +F QM ++ L+SWN +IA+Y EA++LFL +
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ + PD+ T ++++ A GL+ + R ++ + T A M + AR G+
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIM-HMYARCGD 463
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
V + +I D M+ + ++ W ++ G
Sbjct: 464 VLSSREIFDKMAAKDVIS-WNTMIMG 488
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 170/343 (49%), Gaps = 5/343 (1%)
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
S++ + G+M++A A +D + +I GL G P A+ AY M G
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHV 234
D +++ CA LG G + H +IR + DV SL+ YA+ G +D A V
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGF 293
F M ++VTW +++ G+ NGL L EM ++ + D V +++AL AC
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L G+ +H Y +R + ++ +GTS++DMY KCG + A +F M SR +++WN +I
Sbjct: 227 LMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGG 286
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y ++ EEA F+QM + + T +LL+A + + GR +++ + P
Sbjct: 287 YALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGY-ITRRQFLP 345
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++++ ++ G+V+ + K+ M+T+ L W +++
Sbjct: 346 HVVLETALLEMYSKVGKVKSSEKVFGQMTTKT-LVSWNNMIAA 387
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 293/564 (51%), Gaps = 69/564 (12%)
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
V+ +++ M+ + + PDS +K C +L L+ G+++ A+ G G D V SS+L+
Sbjct: 58 VIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLH 117
Query: 120 LYVKCGKMNEAMVAFEKM-----------------------------QRKDL------VC 144
+YV+ + +A F+K+ Q +DL V
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVS 177
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ MI+G +G +AV ++ M EG+ D + ++ A DL G+ +H Y I
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237
Query: 205 RRHLNLDVKVQTSLVDMYAK-------------------------------TGHLDLASH 233
++ L D V ++L+DMY K G +D A
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297
Query: 234 VFKNMS--RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VFK +N+V+W ++I+ +QNG LEL EMQ G +P+SV++ L AC I
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357
Query: 292 GFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
L GK+ H +++R FN V +G+++IDMY+KCG +R FD M +R+L+SWN ++
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A Y +HG EA+++F M KPDH +F +LSA + GL EEG ++FD M + +
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+ +HY+CMV LL R+G +EEA ++ M EP VW ALLS C H + +GE AK
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAK 537
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
+V +L P + G + L+SN +A + W EV VR MR G+KK PGYS +E+ ++H +
Sbjct: 538 RVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLL 597
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMR 554
D SH Q I+ L KL +EM+
Sbjct: 598 AGDSSHPQMPQIIEKLAKLTVEMK 621
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 179/386 (46%), Gaps = 50/386 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD----TYNSIIIAYSRKESPFEVLGLYNQMIKED 71
+I+ + K + ++LF + GV+ ++N +I ++R S + + ++ M E
Sbjct: 146 LISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEG 205
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC------- 124
++PD ++ + L A L MG +I ++ G G D FV S+++++Y KC
Sbjct: 206 LKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMS 265
Query: 125 ------------------------GKMNEAMVAFEKMQRKDL--VCWSSMINGLVFNGQP 158
G ++ A+ F++ + DL V W+SMI NG+
Sbjct: 266 GVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKD 325
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
EA++ ++ M+ EG+ + V + L+ AC ++ G + H +S+R + DV V ++L
Sbjct: 326 MEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSAL 385
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+DMYAK G + + F M N+V+W +L++G+A +G + + MQ CG +PD
Sbjct: 386 IDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDH 445
Query: 279 VSLVSALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCA 331
VS L AC Q G + G HG R + + ++ + + G A
Sbjct: 446 VSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHY-----SCMVTLLGRSGRLEEA 500
Query: 332 RALFDQMQ-SRDLISWNVIIASYGIH 356
A+ QM D W +++S +H
Sbjct: 501 YAMIKQMPFEPDSCVWGALLSSCRVH 526
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 140/253 (55%), Gaps = 21/253 (8%)
Query: 13 VGRIIALYGG--KNDIV-SARKLFEELPLRGVD----TYNSIIIAYSRKESPFEVLGLYN 65
VG AL G +N +V +A ++F++ +G+D ++ S+I + S+ E L L+
Sbjct: 276 VGACNALVTGLSRNGLVDNALEVFKQF--KGMDLNVVSWTSMIASCSQNGKDMEALELFR 333
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+M E V+P+S T L AC ++ L G+ ++ G NDV+VGS+++++Y KCG
Sbjct: 334 EMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCG 393
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
+M + + F+ M ++LV W+S++ G +G+ EA++ ++ M++ G D V ++
Sbjct: 394 RMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLS 453
Query: 186 ACADLGDSRFGLSVHGY----SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS 239
AC ++ GL+ G+ S+ R+ ++ +++ + +V + ++G L+ A + K M
Sbjct: 454 AC-----TQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMP 508
Query: 240 -RINIVTWGALIS 251
+ WGAL+S
Sbjct: 509 FEPDSCVWGALLS 521
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSV 318
G + + M + G PDS L + + CA + L+ GK +H + V + V+ +S+
Sbjct: 56 GHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSL 115
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+ MY + AR +FD++ +++ + +I+ + G +E LF Q + V+ +
Sbjct: 116 LHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNL 175
Query: 379 STFASLLSALSHSG 392
++ ++S + SG
Sbjct: 176 VSWNGMISGFNRSG 189
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 285/495 (57%), Gaps = 7/495 (1%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
++ + P T + + + L ++ + V+ G+ D F+ + ++N++ +
Sbjct: 60 LLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDT 119
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++ A F+K +++ + W+++ L G+ + ++ Y RM G+ +D L++A
Sbjct: 120 VDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKA 179
Query: 187 CAD----LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
C + + G +H + +R V V T+L+DMYA+ G + AS VF M N
Sbjct: 180 CVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKN 239
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFE--PDSVSLVSALLACAQIGFLKLGKSI 300
+V+W A+I+ +A+NG LEL EM + P+SV++VS L ACA L+ GK I
Sbjct: 240 VVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLI 299
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y +RR D L + +++I MY++CG + +FD+M +D++ WN +I+SYG+HG+G
Sbjct: 300 HAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYG 359
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+A+ +F +MI+ P H +F S+L A SH+GLVEEG+ F+ MV ++ IQP+ +HYAC
Sbjct: 360 RKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYAC 419
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RA ++EA KI++ + EPG VW +LL C H + E+ +K++ KL P +
Sbjct: 420 MVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTN 479
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G + L+++ +A + W+EV V+K + ++KVPG S +EV ++++F D+ + Q
Sbjct: 480 AGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQG 539
Query: 540 EDIVYVLKKLYLEMR 554
E + +L L EM+
Sbjct: 540 EQLHALLVNLSNEMK 554
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 229/491 (46%), Gaps = 66/491 (13%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I ++ + + +ARK+F++ R + +N++ A + +VL LY +M V
Sbjct: 109 KLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSS 168
Query: 75 DSSTFTVALKACVS----LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV+ + L+ G+EI + GYG V V ++++++Y + G ++ A
Sbjct: 169 DRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYA 228
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F++M K++V WS+MI NG+P EA++ ++ M D+ + V M+ ++QACA
Sbjct: 229 SAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACA 288
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
G +H Y +RR L+ + V ++L+ MYA+ G L+ +F M + ++V W +
Sbjct: 289 AFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNS 348
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LIS + +G +++ EM GF P +S +S L AC+ G ++ GK + V+
Sbjct: 349 LISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEH 408
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++ Y+ C V RA L +
Sbjct: 409 GIQ-----PSVEHYA-CMVDLLGRA---------------------------NRLDEAAK 435
Query: 369 MIETM-VKPDHSTFASLLSAL---SHSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDL 423
+IE + ++P + SLL A H L E +K++PT +Y + D+
Sbjct: 436 IIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRL------FKLEPTNAGNYVLLADI 489
Query: 424 LARA---GEVEEALKIVDSMSTE--PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
A A EV+ K++DS + PG + W+ + K +S V + NP
Sbjct: 490 YAEAEMWDEVKRVKKLLDSRELQKVPGRS-WIEV-----RRKIYSF-----TSVDEFNPQ 538
Query: 479 DLGIHALVSNF 489
+HAL+ N
Sbjct: 539 GEQLHALLVNL 549
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ A+ + + ++ +Y + A +F+E+P++ V +++++I Y++ P+E
Sbjct: 200 ILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEA 259
Query: 61 LGLYNQMI--KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L L+ +M+ D P+S T L+AC + L+ G+ I + G + + V S+++
Sbjct: 260 LELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALI 319
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y +CGK+ + F++M +KD+V W+S+I+ +G R+A+ ++ M G +
Sbjct: 320 TMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHI 379
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ ++ AC+ G G + ++ H + V+ +VD+ + LD A+ + ++
Sbjct: 380 SFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIED 439
Query: 238 MSRIN--IVTWGALI 250
+ RI WG+L+
Sbjct: 440 L-RIEPGPKVWGSLL 453
>gi|242043708|ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
gi|241923102|gb|EER96246.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
Length = 691
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 302/554 (54%), Gaps = 37/554 (6%)
Query: 42 DTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+ YN +I A P L Y +MI +D V PD+ T+ L+AC +L +G +
Sbjct: 124 EPYNVLISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHV 183
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A + G +F ++++++Y KCG + A FE M+ +D+V W+SMI+G +GQ RE
Sbjct: 184 RAADAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWRE 243
Query: 161 AVDAYKRMKKEGIDADEVV----------------MMGLIQ------------------- 185
AV+ ++RM+ EG + + V +GLI+
Sbjct: 244 AVELFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSN 303
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
AC+ G R G +HG ++R + V +++ MYA+ ++ A +F+ M +V
Sbjct: 304 ACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVA 363
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +I+GFA + A + + EM +P+ V++V+ L CA++ L+ G+ +H + +
Sbjct: 364 WNTMIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHII 423
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
++ F +L S+IDMYSK G S A+ +FD M D+IS+ +IA +G+ G G +L
Sbjct: 424 KQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLR 483
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
F +MI++ + PD ++LSA SHSGLV+EG FD MV Y I+P +HY+CMVDL
Sbjct: 484 FFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQMEHYSCMVDLY 543
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
ARAG +E+A ++++ P + AL+ CH IGE+ A+++L++ D+ G +
Sbjct: 544 ARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTDNAGHYV 603
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L++N +A W E+A VRK MR G+ K PG + ++ F++ D+S+ +I
Sbjct: 604 LIANMYAAAGCWNELATVRKLMRDLGVMKAPGLAWADLGNGFTPFLVGDRSNPLAPEIYE 663
Query: 545 VLKKLYLEMRAISS 558
VL +L +MR++++
Sbjct: 664 VLDELTEQMRSMNN 677
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 167/359 (46%), Gaps = 37/359 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-------- 67
++++Y D+V+AR +FE + R V ++NS+I Y+ E + L+ +M
Sbjct: 200 LVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVN 259
Query: 68 -----------------------IKEDVRPDSS----TFTVALKACVSLMDLKMGEEIWR 100
I++ VR +S T + AC L++G+EI
Sbjct: 260 SVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHG 319
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
AV + V ++++ +Y +C M A++ F M+ LV W++MI G +
Sbjct: 320 LAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEA 379
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A ++ M + + V ++ + CA + + + G +H + I++ + SL+D
Sbjct: 380 ASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLID 439
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY+K+G L +A +VF M +++++ ++I+GF G +L M G PD++
Sbjct: 440 MYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAII 499
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQ 337
+V+ L AC+ G + G+ + V+ + + + ++D+Y++ G+ A L +Q
Sbjct: 500 MVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQ 558
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I +Y ND+ A LF + G+ +N++I ++ + ++ +M+ DV
Sbjct: 333 INAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSDV 392
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P+ T L C + +L+ G E+ ++ G+ + +S++++Y K G+++ A
Sbjct: 393 QPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQN 452
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA---- 188
F+ M D++ ++SMI G G+ ++ +KRM GI D ++M+ ++ AC+
Sbjct: 453 VFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGL 512
Query: 189 -DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
D G+ F V Y I+ + + + +VD+YA+ G L+ A +
Sbjct: 513 VDEGEELFDKMVKSYGIKPQM----EHYSCMVDLYARAGLLEKAEELLNQ 558
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK Y +I +Y + A+ +F+ + + ++ S+I + +
Sbjct: 422 IIKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVS 481
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLN 119
L + +MI + PD+ L AC + GEE++ K V+ G + S M++
Sbjct: 482 LRFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQMEHYSCMVD 541
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV 153
LY + G + +A E + + S+M+ LV
Sbjct: 542 LYARAGLLEKAE---ELLNQTPFPPTSTMVAALV 572
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 284/498 (57%), Gaps = 4/498 (0%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+++M+ + P++ TF +C +L L +L +D S++ +
Sbjct: 101 LTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITM 160
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVV 179
Y +CG++ A F+++ R+DLV W+SMI G G REAV+ + M +++G + DE+
Sbjct: 161 YSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMS 220
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++ AC +LGD G V G+ + R + L+ + ++L+ MYAK G L A +F M+
Sbjct: 221 LVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMA 280
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+++TW A+ISG+AQNG+A + L M+ + ++L + L ACA IG L LGK
Sbjct: 281 ARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQ 340
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
I Y +R F ++ + T++IDMY+KCG + A+ +F +M ++ SWN +I++ HG
Sbjct: 341 IDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGK 400
Query: 359 GEEALSLFLQMIETM--VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
+EALSLF M + +P+ TF LLSA H+GLV EG FD+M + + + P +H
Sbjct: 401 AKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEH 460
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y+CMVDLLARAG + EA +++ M +P ALL C + K IGE+V + +L+++
Sbjct: 461 YSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVD 520
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + G + + S +A WE+ A +R MR+ G+ K PG S +EV LH F D
Sbjct: 521 PSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLC 580
Query: 537 NQYEDIVYVLKKLYLEMR 554
D+ ++ LY E++
Sbjct: 581 LDSIDLSNIIDLLYEELK 598
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 191/392 (48%), Gaps = 39/392 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+ K L + ++ +I +Y + ARK+F+E+P R + ++NS+I Y++ E
Sbjct: 142 VFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREA 201
Query: 61 LGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ ++ +M + D PD + L AC L DL++G + VE G + ++GS++++
Sbjct: 202 VEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALIS 261
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG + A F+ M +D++ W+++I+G NG EA+ + MK++ + +++
Sbjct: 262 MYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKIT 321
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ ACA +G G + Y+ +R D+ V T+L+DMYAK G L A VFK M
Sbjct: 322 LTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP 381
Query: 240 RINIVTWGALISGFAQNGLAGSTLELL--MEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ N +W A+IS A +G A L L M + G P+ ++ V L AC G +
Sbjct: 382 QKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVN-- 439
Query: 298 KSIHGYTVRRFDFNLVLGTSV--IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GY R FD L V I+ YS C V ARA
Sbjct: 440 ---EGY--RLFDMMSTLFGLVPKIEHYS-CMVDLLARA---------------------- 471
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
GH EA L +M E KPD T +LL A
Sbjct: 472 -GHLYEAWDLIEKMPE---KPDKVTLGALLGA 499
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 293/509 (57%), Gaps = 3/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I YG + ARK+FEE+ R V ++ +I A+++ VL ++M E +P+
Sbjct: 163 LINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPN 222
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC + + G ++ + E G DV + ++++ +YVKCG M++A F+
Sbjct: 223 KITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFK 282
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ W+++I+G V NG+ +EA+ ++ M +G+ D + ++ ++ A LGD +
Sbjct: 283 GMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQ 342
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y ++ D+ +Q SL++MYAK G + A +F+NM+R +IV+W A++ G+ +
Sbjct: 343 GRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVK 402
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ L +M+ ++LVS L AC+Q+G L G+ IH Y + ++ L
Sbjct: 403 GLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWL 462
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM- 373
++++DMY+KCG A +F +M+ + ++WN +I G G+EA++LF Q+++
Sbjct: 463 ESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRD 522
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KPD T +L A +H G+V+EG ++F+LM++ I P +HY C+VDLL RAG ++EA
Sbjct: 523 PKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT-LGIVPDNEHYGCIVDLLGRAGLLDEA 581
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M +P +W +LL+ C H + +G+ + + ++ L P+D+G H L+SN A E
Sbjct: 582 YNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEE 641
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+W++V VR M ++K PG+S ++V
Sbjct: 642 GQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 235/488 (48%), Gaps = 12/488 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGG---KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
+++ +L + GR++ L ++D+ ARK+F+ + +N +I Y+ +P
Sbjct: 41 LVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNSCHAP 100
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLK---MGEEIWRKAVELGYGNDVFVG 114
+ L L+ M + V PD+ T ++ + K G+ + +G+ +D+FV
Sbjct: 101 MDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVM 160
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
S ++N Y + +A FE+M +D+V W+ MI+ GQ + + M+ EG
Sbjct: 161 SGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTK 220
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+++ ++ L+ AC + GL V+ + DV ++ +L+ MY K G + A
Sbjct: 221 PNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKT 280
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
FK M N +W LI GF QNG L + EM S G PD ++LVS L AQ+G L
Sbjct: 281 FKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDL 340
Query: 295 KLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ G+ +H Y +++L S+I+MY+KCG + A +F+ M RD++SW ++ Y
Sbjct: 341 QQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGY 400
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
A +LF M V SLLSA S G +++GR + K ++
Sbjct: 401 VKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEK-SVRTD 459
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
+ +VD+ A+ G ++ A +I M + LA W A++ G + + + +++L
Sbjct: 460 MWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLA-WNAMIGGLASQGQGKEAVALFEQLL 518
Query: 474 KLN---PD 478
KL PD
Sbjct: 519 KLRDPKPD 526
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 14/284 (4%)
Query: 180 MMGLIQACADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKT---GHLDLASHVF 235
++ + ACA SR L+ +HG +R HL D V LV + A + A VF
Sbjct: 21 LLAHLDACA----SRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVF 76
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
M++ + W +I G+ LEL M+ G PD+ ++ + + A K
Sbjct: 77 DRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWK 136
Query: 296 ---LGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G ++H R F +L + + +I+ Y AR +F++M RD++SW ++I+
Sbjct: 137 GRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMIS 196
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
++ G + L +M KP+ T SLLSA V++G W V +Y I+
Sbjct: 197 AFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKG-LWVYARVDEYGIE 255
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + + G + +A K M W L+ G
Sbjct: 256 ADVDIRNALIGMYVKCGCMSDAWKTFKGMPIR-NTKSWNTLIDG 298
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/509 (36%), Positives = 284/509 (55%), Gaps = 6/509 (1%)
Query: 20 YGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPF--EVLGLYNQMIKEDVRPD 75
Y N + A F +P R ++N+I+ YS+ ++ +VL LYN+M + D
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S A+KACV L L+ G I A++ G D +V S++ +Y + G M A F+
Sbjct: 109 SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD 168
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W ++ G + + E + M+ G+ D + ++ L++AC ++ +
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VHG SIRR ++ +Q S++DMY K LD A +F+ N+V W LISGFA
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+ A +L +M P+ +L + L++C+ +G L+ GKS+HGY +R + + V
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
TS IDMY++CG AR +FD M R++ISW+ +I ++GI+G EEAL F +M
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V P+ TF SLLSA SHSG V+EG F+ M Y + P E+HYACMVDLL RAGE+ EA
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+D+M +P + W ALLS C HK+ + ++A+K+L + P+ ++ L+SN +A
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
WE V VR+ M G +K G S EV
Sbjct: 529 GMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 189/370 (51%), Gaps = 8/370 (2%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMI 149
L +++ K + G+ ++V +GSS+ N Y++ +++ A +F ++ +++ W++++
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 150 NGLVFNGQP--REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+G + + + Y RM++ D ++ I+AC LG G+ +HG +++
Sbjct: 80 SGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG 139
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+ D V SLV+MYA+ G ++ A VF + N V WG L+ G+ + L
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKC 325
M+ G D+++L+ + AC + K+GK +HG ++RR D + L S+IDMY KC
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
+ AR LF+ R+++ W +I+ + EA LF QM+ + P+ T A++L
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ S G + G+ M+ + I+ ++ +D+ AR G ++ A + D M E
Sbjct: 320 VSCSSLGSLRHGKSVHGYMI-RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERN 377
Query: 446 LAVWVALLSG 455
+ W ++++
Sbjct: 378 VISWSSMINA 387
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 199/379 (52%), Gaps = 10/379 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA+K+F+E+P+R + ++ Y + EV L+ M + D
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALD 209
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV-FVGSSMLNLYVKCGKMNEAMVAF 134
+ T +KAC ++ K+G+ + ++ + + ++ +S++++YVKC ++ A F
Sbjct: 210 ALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E +++V W+++I+G + EA D +++M +E I ++ + ++ +C+ LG R
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHGY IR + +D TS +DMYA+ G++ +A VF M N+++W ++I+ F
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
NGL L+ +M+S P+SV+ VS L AC+ G +K G R D+ +V
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR--DYGVVP 447
Query: 315 G----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQM 369
++D+ + G A++ D M + + S W ++++ IH + A + ++
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 370 IETMVKPDHSTFASLLSAL 388
+ ++P+ S+ LLS +
Sbjct: 508 LS--MEPEKSSVYVLLSNI 524
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI+ + + I +Y +I AR +F+ +P R V +++S+I A+ E
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG----SS 116
L +++M ++V P+S TF L AC ++K G W++ + V +
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG---WKQFESMTRDYGVVPEEEHYAC 454
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLV-CWSSMING 151
M++L + G++ EA + M K + W ++++
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 293/540 (54%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y +A + F+++ R + ++ +II AY+ + E +GL+ +M+ + P+
Sbjct: 120 ILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPN 179
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S F+ + + L +G++I + + + + D+ + + + N+YVKCG ++ A VA
Sbjct: 180 FSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATN 239
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM RK V + ++ G + R+A+ + +M EG++ D V +++ACA LGD
Sbjct: 240 KMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYT 299
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y I+ L +V V T LVD Y K + A F+++ N +W ALI+G+ Q
Sbjct: 300 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQ 359
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G LE+ ++S G +S + AC+ + L G IH +++ + G
Sbjct: 360 SGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG 419
Query: 316 TS-VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S +I MYSKCG A F + D ++W II ++ HG EAL LF +M + V
Sbjct: 420 ESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGV 479
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF LL+A SHSGLV+EG+ + D M KY + PT HY CM+D+ +RAG + EAL
Sbjct: 480 RPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEAL 539
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ SM EP + W +LL GC + + IG A + +L+P D + ++ N +A+
Sbjct: 540 EVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAG 599
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
KW+E A RK M + ++K S + V G++H F++ D+ H Q E I LK+L + +
Sbjct: 600 KWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFK 659
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 187/449 (41%), Gaps = 39/449 (8%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
++ K C +L L G+ + + N F+ + +L +Y C A F+K+
Sbjct: 82 SYEYLFKMCGTLGALSDGKLFHNRLQRMANSNK-FIDNCILQMYCDCKSFTAAERFFDKI 140
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+DL W+++I+ G+ EAV + RM GI + + LI + AD G
Sbjct: 141 VDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGK 200
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+H IR D+ ++T + +MY K G LD A M+R + V L+ G+ Q
Sbjct: 201 QIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAA 260
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L L +M S G E D L ACA +G L GK IH Y ++ + + +GT
Sbjct: 261 RNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGT 320
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
++D Y KC AR F+ + + SW+ +IA Y G + AL +F + V
Sbjct: 321 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLL 380
Query: 377 DHSTFASLLSALS-----------HSGLVEEGRYWF----DLMVSKYKI----------- 410
+ + ++ A S H+ +++G + M++ Y
Sbjct: 381 NSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAF 440
Query: 411 ----QPTEKHYACMVDLLARAGEVEEALKIVDSMS---TEPGLAVWVALLSGCHNHKKFS 463
+P + ++ A G+ EAL++ M P + ++ LL+ C +H
Sbjct: 441 LAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNAC-SHSGLV 499
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
K K+ L D G++ + ++ M
Sbjct: 500 ---KEGKQFLDSMTDKYGVNPTIDHYNCM 525
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LIS A+ G E + M G + S C +G L GK H R
Sbjct: 52 LIS-LAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA 110
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ N + ++ MY C + A FD++ RDL SW II++Y G +EA+ LFL+
Sbjct: 111 NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLR 170
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGR 398
M++ + P+ S F++L+ + + +++ G+
Sbjct: 171 MLDLGIIPNFSIFSTLIMSFADPSMLDLGK 200
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L AY + +I +Y + A + F + + +II A++ E L
Sbjct: 409 IKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEAL 468
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSMLN 119
L+ +M VRP+ TF L AC +K G++ + YG + + + M++
Sbjct: 469 RLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTD-KYGVNPTIDHYNCMID 527
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+Y + G + EA+ M D++ W S++ G
Sbjct: 528 IYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 267/456 (58%), Gaps = 6/456 (1%)
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
++K + G +DV+ + Y+ G + + FE M ++D+V W+++I+G NG
Sbjct: 123 YKKVFDEGKTSDVYSKKEKESYYL--GSLRKV---FEMMPKRDIVSWNTVISGNAQNGMH 177
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
+A+ + M + D + ++ A+ + G +HGY+IR + DV + +SL
Sbjct: 178 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+DMYAK +D + VF + + + ++W ++I+G QNG+ L+ +M +P+
Sbjct: 238 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 297
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
VS S + ACA + L LGK +HGY +R RFD N+ + ++++DMY+KCG AR +FD+
Sbjct: 298 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 357
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M+ D++SW +I Y +HGH +A+SLF +M VKP++ F ++L+A SH+GLV+E
Sbjct: 358 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEA 417
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+F+ M Y+I P +HYA + DLL R G +EEA + + M EP +VW LL+ C
Sbjct: 418 WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACR 477
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
HK + EKV+KK+ ++P ++G + L+SN ++ +W++ +R MR GMKK P
Sbjct: 478 VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPAC 537
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
S +E+ ++HAF+ DKSH Y+ I LK L +M
Sbjct: 538 SWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQM 573
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 178/340 (52%), Gaps = 7/340 (2%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S RK+FE +P R + ++N++I ++ + L + +M D+RPDS T + L
Sbjct: 148 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFA 207
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
++L G+EI A+ GY DVF+GSS++++Y KC +++++ F + + D + W+S
Sbjct: 208 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 267
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I G V NG E + +++M I + V ++ ACA L G +HGY IR
Sbjct: 268 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 327
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ +V + ++LVDMYAK G++ A +F M ++V+W A+I G+A +G A + L
Sbjct: 328 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFK 387
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG----TSVIDMYS 323
M+ G +P+ V+ ++ L AC+ G + ++ + D+ ++ G +V D+
Sbjct: 388 RMEVEGVKPNYVAFMAVLTACSHAGLVD--EAWKYFNSMTQDYRIIPGLEHYAAVADLLG 445
Query: 324 KCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEA 362
+ G A M S W+ ++A+ +H + E A
Sbjct: 446 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELA 485
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 205/421 (48%), Gaps = 29/421 (6%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD + F LK+C + DL+ GE + + LG G D++ ++++N+Y K + E V
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGV- 66
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
QR C S M+ G+ +PRE + + DE V I DL
Sbjct: 67 ----QR---FCDSKMLGGI---PEPRE-IGKCSNSHDLPCELDERV--AGIDQNGDLNQ- 112
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK----TGHLDLASHVFKNMSRINIVTWGAL 249
+S Y + + + + +TS D+Y+K + +L VF+ M + +IV+W +
Sbjct: 113 ---MSNILYQVNTYKKVFDEGKTS--DVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTV 167
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
ISG AQNG+ L ++ EM + PDS +L S L A+ L GK IHGY +R +
Sbjct: 168 ISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGY 227
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D ++ +G+S+IDMY+KC + +F + D ISWN IIA +G +E L F Q
Sbjct: 228 DADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQ 287
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ +KP+H +F+S++ A +H + G+ ++ + + + +VD+ A+ G
Sbjct: 288 MLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII-RSRFDGNVFIASALVDMYAKCG 346
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG--CHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ A I D M + W A++ G H H +I +V + P+ + A++
Sbjct: 347 NIRTARWIFDKMELYD-MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405
Query: 487 S 487
+
Sbjct: 406 T 406
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + ++F LP ++NSII + E L + QM+ ++P+
Sbjct: 237 LIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPN 296
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+F+ + AC L L +G+++ + + +VF+ S+++++Y KCG + A F+
Sbjct: 297 HVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFD 356
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ D+V W++MI G +G +A+ +KRM+ EG+ + V M ++ AC S
Sbjct: 357 KMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC-----SHA 411
Query: 196 GLSVHGYSIRRHLNLDVKV------QTSLVDMYAKTGHLDLASHVFKNM 238
GL + + D ++ ++ D+ + G L+ A +M
Sbjct: 412 GLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM 460
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 284/517 (54%), Gaps = 43/517 (8%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++ ++I + ++P + L Y M + V + TF LKA + G + K
Sbjct: 93 SWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKL 152
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
V++G+ DVF ++++++Y+KCG + +A + F++M ++V W++MI G
Sbjct: 153 VKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITG----------- 201
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
C GD+ + G R +V ++V Y
Sbjct: 202 ------------------------CFGCGDTERARRLFGEMPER----NVGSWNAVVGGY 233
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+K GH+D+A +F M ++V+WG++IS + QNG A LEL EM G DS+ +
Sbjct: 234 SKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIIT 293
Query: 283 SALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S L ACAQIG L +G+ IH Y R + ++ L T+++DMY+KCG A +F+ M +
Sbjct: 294 SILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRK 353
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
+L SWN +++ IHGHG AL LF QM T V P+ TF ++LSA SH G VEEG F
Sbjct: 354 NLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKF 413
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ M ++ I P +HY CMVD+L R G + EA +++ +M EP + +W ALL+ C H
Sbjct: 414 NQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGY 473
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-KKVPGYSVV 520
++GE V + KL +D G + L+SN FA + +W EV RK M++ G+ KK+PGYS +
Sbjct: 474 TNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSI 533
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKL--YLEMRA 555
E++ +H F ED+ H+++ ++ V+++L +LE++
Sbjct: 534 ELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLEVKG 570
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I A LF+E+P V T+N++I
Sbjct: 167 LIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMI--------------------------- 199
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAF 134
C D + ++ + E G+ + VG Y K G ++ A F
Sbjct: 200 --------TGCFGCGDTERARRLFGEMPERNVGSWNAVVGG-----YSKLGHVDIARSLF 246
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M +D+V W SMI+ V NG+ EA++ +K M G+ AD +++ ++ ACA +G
Sbjct: 247 DLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALD 306
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y R L DV + T+LVDMYAK G +D A VF M R N+ +W A++SG A
Sbjct: 307 MGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLA 366
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G + LEL +M+S G P+ ++ V+ L AC+ IG ++ G + F+ +
Sbjct: 367 IHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKV 426
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGH---GEEALSLFLQ 368
++D+ + G+ + A+ + M +++ W ++ + +HG+ GE+ +
Sbjct: 427 EHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGY--- 483
Query: 369 MIETMVKPDHSTF---ASLLSALSHSGLVEEGR 398
I+ +V D + +++ +A S VE+ R
Sbjct: 484 -IQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTR 515
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 49/423 (11%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY-VKCGKMNEAMVAFEKMQRK 140
AL++C S DLK +I + + G D F+ + + Y V ++ A F +
Sbjct: 33 ALQSCKSTEDLK---KIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYP 89
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D W++MI G V P +A++ Y M++ G++ ++ + +++A + G VH
Sbjct: 90 DSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVH 149
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G ++ DV + +L+ MY K G + A +F M N+VTW +I+G
Sbjct: 150 GKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITG-------- 201
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVID 320
C G + + + G R N+ +V+
Sbjct: 202 ---------------------------CFGCGDTERARRLFGEMPER---NVGSWNAVVG 231
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
YSK G AR+LFD M RD++SW +I++Y +G EAL LF +M+ V D
Sbjct: 232 GYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSII 291
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+LSA + G ++ GR W + + K++ +VD+ A+ G ++ A + ++M
Sbjct: 292 ITSILSACAQIGALDMGR-WIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTM 350
Query: 441 STEPGLAVWVALLSG--CHNHKKFSIGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQK 495
+ L W A+LSG H H ++ + + P+D+ A++ S+ ++E+
Sbjct: 351 PRK-NLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEG 409
Query: 496 WEE 498
W++
Sbjct: 410 WKK 412
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M + N+ ++ VG L G DI AR LF+ +P R V ++ S+I AY + E
Sbjct: 218 MPERNVGSWNAVVGGYSKL--GHVDI--ARSLFDLMPERDVVSWGSMISAYVQNGRAAEA 273
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M+ V DS T L AC + L MG I NDVF+ ++++++
Sbjct: 274 LELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDM 333
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++ A F M RK+L W++M++GL +G A++ +K+M+ G+ +++
Sbjct: 334 YAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITF 393
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ ++ AC+ +G G + + N+ KV+ +VD+ + G ++ A + + M
Sbjct: 394 VAVLSACSHIGSVEEGWKKFN-QMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTM 452
Query: 239 S-RINIVTWGALISGFAQNG 257
N+V WGAL++ +G
Sbjct: 453 PLEPNVVIWGALLNACKVHG 472
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 266/445 (59%), Gaps = 4/445 (0%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ + ++N+YVK G +++A F+KM +++V W++MI+ +A++ M +E
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ + +++AC L + R +H I+ L+ DV V+++L+D+Y++ G L+ A
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
VF M ++V W ++I+GFAQN L L M+ GF +L S L AC +
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L+LG+ +H + V ++D +L+L +++DMY KCG A A+F +M +D+ISW+ +IA
Sbjct: 178 ALLELGRQVHVH-VLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
+G+ +EAL LF M +KP++ T +L A SH+GLVEEG Y+F M + I
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
P +HY CM+DLL RAG + EA+ +++ M EP W ALL+ C H+ + AK+
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356
Query: 472 VLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIM 531
+L+L+P D G + L+SN +A Q+W +VA VR+TM G+KK PG S +EV+ ++HAFI+
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416
Query: 532 EDKSHNQYEDIVYVLKKLYLEMRAI 556
D+SH Q +I L +L ++ +
Sbjct: 417 GDRSHPQIREINIQLNQLIYKLMGV 441
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 198/368 (53%), Gaps = 20/368 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A+ +F+++P R V ++ ++I AYS + + L M++E VRP+ T++ L+AC
Sbjct: 19 AQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDG 78
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +L+ ++ +++G +DVFV S+++++Y + G++ A+ F++M DLV WSS+
Sbjct: 79 LFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSI 135
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G N EA+ +KRMK+ G A + + +++AC L G VH + ++
Sbjct: 136 IAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--Y 193
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ D+ + +L+DMY K G L+ A+ VF M ++++W +I+G AQNG + L+L
Sbjct: 194 DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFES 253
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDM 321
M+ G +P+ V++V L AC+ G ++ G K + G R + +ID+
Sbjct: 254 MKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYG-----CMIDL 308
Query: 322 YSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
+ G S A L ++M+ D ++W ++ + +H + + A+ Q++ + P +
Sbjct: 309 LGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR--LDPQDAG 366
Query: 381 FASLLSAL 388
LLS +
Sbjct: 367 TYVLLSNI 374
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 127/240 (52%), Gaps = 6/240 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ +A ++F+E+ + ++SII +++ E L L+ +M +
Sbjct: 104 LIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQ 163
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T T L+AC L L++G ++ L Y D+ + +++L++Y KCG + +A F
Sbjct: 164 QTTLTSVLRACTGLALLELGRQVHVHV--LKYDQDLILNNALLDMYCKCGSLEDANAVFV 221
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KD++ WS+MI GL NG +EA+ ++ MK GI + V ++G++ AC+ G
Sbjct: 222 RMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEE 281
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISG 252
GL + +S++ +D + ++D+ + G L A + M + VTW AL++
Sbjct: 282 GL-YYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 293/502 (58%), Gaps = 4/502 (0%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI+ A+ F ++ + V +N +I + ++ E L+ M+ + P + T ++
Sbjct: 205 DIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQ 264
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+C + +L G+ + + G D V ++++++Y K G + A FE M ++LV
Sbjct: 265 SCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVS 324
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ MI+G V NG E + ++++ + + D ++ LIQ C+ D G +HG+
Sbjct: 325 WNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIY 384
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
RR L+L++ + T++VD+YAK G L AS VF+ M N+++W A++ G AQNG A L+
Sbjct: 385 RRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALK 444
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMY 322
L +MQ+ ++++LVS + C +G L+ G+S+H T+ RF F +V+ T++IDMY
Sbjct: 445 LFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHA-TLTRFHFASEVVVMTALIDMY 503
Query: 323 SKCGVPSCARALFDQ-MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
+KC + A +F + +D+I +N +I+ YG+HG G +AL ++ +M ++P+ STF
Sbjct: 504 AKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTF 563
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
SLLSA SHSGLVEEG F MV + PT+K YAC+VDLL+RAG + +A ++++ M
Sbjct: 564 VSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMP 623
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
P + LL+GC HK +G K+A ++L L + I+ +SN +A +W+ V
Sbjct: 624 FTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKY 683
Query: 502 VRKTMRKSGMKKVPGYSVVEVN 523
VR M + +KK+PGYS +EVN
Sbjct: 684 VRGLMMEQEIKKIPGYSSIEVN 705
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 264/485 (54%), Gaps = 13/485 (2%)
Query: 1 MIKTNLSAYGNS--VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+I TN YG+ V +++A Y + +ARK+F+E+P N+++ Y + E
Sbjct: 79 IIITN-PIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYN 137
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ + L M + + DS T ALKAC+ L+D +MG E+ AV G F+GSS+L
Sbjct: 138 DCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSIL 197
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
N VK G + A F +M KD+VCW+ MI G + G RE + + M I+ V
Sbjct: 198 NFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAV 257
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M+ LIQ+C ++ + FG +HG+ + ++ D +V T+L+DMY K+G ++ A +F+NM
Sbjct: 258 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 317
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLME--MQSCGFEPDSVSLVSALLACAQIGFLKL 296
N+V+W +ISG+ QNGL TL L + M GF DS ++VS + C++ L
Sbjct: 318 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGF--DSGTVVSLIQLCSRTADLDG 375
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GK +HG+ RR D NLVL T+++D+Y+KCG + A ++F++M+++++ISW ++
Sbjct: 376 GKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQ 435
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+GH +AL LF QM V + T SL+ + GL+ EGR ++++
Sbjct: 436 NGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRS-VHATLTRFHFASEVV 494
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCH--NHKKFSIGEKVAKK 471
++D+ A+ ++ A + T + ++ +++S G H HK + ++ ++
Sbjct: 495 VMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNRE 554
Query: 472 VLKLN 476
L+ N
Sbjct: 555 GLQPN 559
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 284/508 (55%), Gaps = 6/508 (1%)
Query: 20 YGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPF--EVLGLYNQMIKEDVRPD 75
Y N + A F+ +P R ++N+I+ YS+ +S + +VL LYN+M + D
Sbjct: 49 YIQSNRLDFATASFDRIPCWKRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVD 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S A+KACV L L+ G I A++ G D +V S++ +Y + G M A F+
Sbjct: 109 SFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFD 168
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M ++ V W ++ G + + E + M+ G+ D + ++ L++AC ++ +
Sbjct: 169 EMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKE 228
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VHG SIRR ++ ++ S++DMY K LD A +F+ N+V W LISGFA
Sbjct: 229 GKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFA 288
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+ A ++L +M P+ +L + L++C+ +G L+ GKS+HGY +R + + V
Sbjct: 289 KCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
TS ID Y++CG AR +FD M R++ISW+ +I ++GI+G EEAL F M
Sbjct: 349 NFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQN 408
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ P+ TF SLLSA SHSG V+EG F+ M Y + P E+HYACMVDLL RAGE+ EA
Sbjct: 409 LVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEA 468
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+D+M +P + W ALLS C HK+ + ++A+K+L + PD+ ++ L+SN +A
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADA 528
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
WE V VR M G +K G S E
Sbjct: 529 GMWEMVNCVRHKMGIKGYRKPMGLSATE 556
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLV 153
+++ K + G+ ++V +GSS+ N Y++ +++ A +F+++ +++ W+++++G
Sbjct: 24 QQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTILSGYS 83
Query: 154 FNGQP--REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
+ + + Y RM++ D ++ I+AC LG G+ +HG +++ L+ D
Sbjct: 84 KSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKD 143
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V SLV+MYA+ G ++ A VF M N V WG L+ G+ + L M+
Sbjct: 144 DYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRD 203
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPS 329
G D+++L+ + AC + K GK +HG ++RR D + L S+IDMY KC +
Sbjct: 204 TGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLD 263
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR LF+ R+++ W +I+ + EA+ LF QM+ + P+H T A++L + S
Sbjct: 264 NARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCS 323
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
G + G+ M+ + I+ ++ +D AR G ++ A K+ D M
Sbjct: 324 SLGSLRHGKSVHGYMI-RNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMM 373
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 196/379 (51%), Gaps = 10/379 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA+K+F+E+P+R + ++ Y + EV L+ M + D
Sbjct: 150 LVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTGLALD 209
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV-FVGSSMLNLYVKCGKMNEAMVAF 134
+ T +KAC ++ K G+ + ++ + + ++ +S++++YVKC ++ A F
Sbjct: 210 ALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLDNARKLF 269
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E +++V W+++I+G + EA+D +++M E I + + ++ +C+ LG R
Sbjct: 270 ETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLR 329
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHGY IR + +D TS +D YA+ G++ +A VF M + N+++W ++I+ F
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINAFG 389
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
NGL L+ M+S P+SV+ VS L AC+ G +K G R D+ LV
Sbjct: 390 INGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR--DYGLVP 447
Query: 315 G----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQM 369
++D+ + G A++ D M + + S W ++++ IH + A + ++
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 370 IETMVKPDHSTFASLLSAL 388
+ ++PD S+ LLS +
Sbjct: 508 LS--MEPDESSVYVLLSNI 524
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI+ + + I Y +I ARK+F+ +P R V +++S+I A+ E
Sbjct: 338 MIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINAFGINGLFEEA 397
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRK----AVELGYGNDVFVGSS 116
L ++ M +++ P+S TF L AC ++K G W++ + G + +
Sbjct: 398 LDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEG---WKQFESMTRDYGLVPEEEHYAC 454
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLV-CWSSMING 151
M++L + G++ EA + M K + W ++++
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 267/470 (56%), Gaps = 2/470 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D + LK C L G + ++ + +D+ + +++LN+Y KCG + EA F
Sbjct: 50 DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+KM +D V W+++I+G + +P +A+ + +M + G +E + +I+A A
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ + +V V ++L+D+Y + G +D A VF + N V+W ALI+G A
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+ LEL M GF P S S AC+ GFL+ GK +H Y ++ + +
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
G +++DMY+K G AR +FD++ RD++SWN ++ +Y HG G EA+ F +M
Sbjct: 290 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGG 349
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+ +F S+L+A SHSGL++EG ++++LM K I HY +VDLL RAG++ A
Sbjct: 350 IRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVLEAWHYVTIVDLLGRAGDLNRA 408
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L+ ++ M EP A+W ALL+ C HK +G A+ V +L+PDD G H ++ N +A
Sbjct: 409 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 468
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+W + A VRK M++SG+KK P S VE+ +H F+ D+ H Q E+I
Sbjct: 469 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 518
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 182/350 (52%), Gaps = 8/350 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARK+F+++P R T+ ++I YS+ + PF+ L L+NQM++ P+
Sbjct: 92 LLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPN 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +KA + G ++ V+ G+ ++V VGS++L+LY + G M++A + F+
Sbjct: 152 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 211
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W+++I G +A++ ++ M +EG L AC+ G
Sbjct: 212 ALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQ 271
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y I+ L +L+DMYAK+G + A +F +++ ++V+W +L++ +AQ
Sbjct: 272 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 331
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G + EM+ G P+ +S +S L AC+ G L G H Y + + D +VL
Sbjct: 332 HGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKD-GIVLE 388
Query: 316 T----SVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
+++D+ + G + A ++M + W ++ + +H + E
Sbjct: 389 AWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 438
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK+ + ++ +Y I ARK+F+ L R V ++NS++ AY++ E
Sbjct: 279 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEA 338
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ + +M + +RP+ +F L AC L G + + G + + ++++L
Sbjct: 339 VCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDL 398
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+ G +N A+ E+M W +++N
Sbjct: 399 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 430
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 304/542 (56%), Gaps = 7/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+LY + AR +F+++ +R T+NS+I Y R EV ++N+M V+P
Sbjct: 235 LISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPT 294
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +K+C SL +L + + + KA++ G+ D V ++++ KC +M++A+ F
Sbjct: 295 HMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFS 354
Query: 136 KMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M+ K++V W++MI+G + NG +AV+ + +M++EG+ + ++ +
Sbjct: 355 LMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV---- 410
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
F +H I+ + V T+L+D Y K G+ A VF+ + +++ W A+++G+A
Sbjct: 411 FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYA 470
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ-IGFLKLGKSIHGYTVR-RFDFNL 312
Q G +L ++ G +P+ + S + ACA + GK H Y ++ R + L
Sbjct: 471 QTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNAL 530
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++ MY+K G A +F + + RDL+SWN +I+ Y HG ++AL +F +M +
Sbjct: 531 CVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKR 590
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ D TF +++A +H+GLVE+G+ +F+ M++ + I PT KHY+CM+DL +RAG +E+
Sbjct: 591 NMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEK 650
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+ I++ M PG VW LL H+ +GE A+K++ L P+D + L+SN +A
Sbjct: 651 AMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAA 710
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W+E VRK M K +KK PGYS +EV + ++F+ D +H I L +L +
Sbjct: 711 AGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIR 770
Query: 553 MR 554
++
Sbjct: 771 LK 772
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 242/476 (50%), Gaps = 16/476 (3%)
Query: 29 ARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC 86
A LF+++P R + +N ++ +YSR + E L L+ ++ ++PD ST + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
+D K+G ++ + V+ G + V VG+S++++Y+K +N+ F++M +++V W+
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
S++ G +NG + + +M+ EG+ + + +I A + G GL VH ++
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ V SL+ +Y++ G L A VF M + VTW ++I+G+ +NG E+
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+MQ G +P ++ S + +CA + L L K + ++ F + ++ T+++ SKC
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343
Query: 326 GVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
A +LF M+ ++++SW +I+ +G ++A++LF QM VKP+H T++++
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+ + + V E V K + + ++D + G +A+K+ + + +
Sbjct: 404 LT-VHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAK- 457
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLG----IHALVSNFFAMEQ 494
L W A+L+G + K+ +++K + P++ I+A S A EQ
Sbjct: 458 DLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQ 513
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 241/471 (51%), Gaps = 10/471 (2%)
Query: 12 SVG-RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG ++ +Y ++ R++F+E+ R V ++ S++ YS V L+ QM E
Sbjct: 129 SVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYE 188
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V P+ T + + A V+ + +G ++ V+ G+ + V +S+++LY + G + +A
Sbjct: 189 GVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA 248
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+KM+ +D V W+SMI G V NGQ E + + +M+ G+ + +I++CA L
Sbjct: 249 RDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASL 308
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR-INIVTWGAL 249
+ + +++ D V T+L+ +K +D A +F M N+V+W A+
Sbjct: 309 RELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAM 368
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
ISG QNG + L +M+ G +P+ + SA+L F+ +H ++ +
Sbjct: 369 ISGCLQNGGNDQAVNLFSQMRREGVKPNHFTY-SAILTVHYPVFV---SEMHAEVIKTNY 424
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + +GT+++D Y K G A +F+ ++++DL++W+ ++A Y G EEA LF Q
Sbjct: 425 ERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQ 484
Query: 369 MIETMVKPDHSTFASLLSAL-SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+I+ +KP+ TF+S+++A S + E+G+ F K ++ + +V + A+
Sbjct: 485 LIKEGIKPNEFTFSSVINACASPTAAAEQGKQ-FHAYAIKMRLNNALCVSSALVTMYAKR 543
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
G ++ A ++ E L W +++SG H + +V ++ K N D
Sbjct: 544 GNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 128/240 (53%), Gaps = 2/240 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKTN + ++ Y + + A K+FE + + + +++++ Y++ E
Sbjct: 419 VIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEA 478
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L++Q+IKE ++P+ TF+ + AC S + G++ A+++ N + V S+++
Sbjct: 479 AKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVT 538
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G ++ A F++ + +DLV W+SMI+G +GQ ++A++ + M+K +D D V
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVT 598
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+G+I AC G G I H+N +K + ++D+Y++ G L+ A + M
Sbjct: 599 FIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 291/543 (53%), Gaps = 3/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SAR + P R V ++ S++ ++ L + +M +E V P+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPN 107
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF KA SL G++I AV+ G DVFVG S ++Y K ++A F+
Sbjct: 108 DFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFD 167
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++L W++ I+ V +G+P+EA++A+ ++ G + + G + AC+D
Sbjct: 168 EIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDL 227
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +HG R + DV V L+D Y K + + +F M N V+W +L++ + Q
Sbjct: 228 GMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQ 287
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L + + E + S L ACA + L+LG+SIH + V+ + N+ +
Sbjct: 288 NHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFV 347
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY KCG + FD+M ++L++ N +I Y G + AL+LF M
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGC 407
Query: 375 --KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
P++ TF SLLSA S +G VE G FD M S Y I+P +HY+C+VD+L RAG VE+
Sbjct: 408 GPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQ 467
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M +P ++VW AL + C H K +G A+ + KL+P D G H L+SN FA
Sbjct: 468 AFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+W E VR+ M+ G+KK GYS + V ++HAF +D+SH ++I +L KL +
Sbjct: 528 AGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNK 587
Query: 553 MRA 555
M A
Sbjct: 588 MEA 590
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 180/375 (48%), Gaps = 4/375 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
LK +S +++G + + V+ L F+ + ++N+Y K A + ++
Sbjct: 13 LKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+S+++GL NG A+ + M++EG+ ++ + +A A L G +H
Sbjct: 73 VVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHA 132
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+++ LDV V S DMY KT D A +F + N+ TW A IS +G
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKE 192
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
+E +E + G +P+S++ L AC+ L LG +HG R FD ++ + +ID
Sbjct: 193 AIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLID 252
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
Y KC + +F +M ++ +SW ++A+Y + E+A L+L+ + +V+
Sbjct: 253 FYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFM 312
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+LSA + +E GR V K ++ + +VD+ + G +E++ + D M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAV-KACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 441 STEPGLAVWVALLSG 455
E L +L+ G
Sbjct: 372 -PEKNLVTLNSLIGG 385
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 300/531 (56%), Gaps = 2/531 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A+++F P + V ++ +I ++ + E + ++ +M + +P++ T + L A
Sbjct: 72 LADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPA 131
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
+L +++ + + V G+ +VFV ++++++Y K G M A FE M +++V W
Sbjct: 132 FANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSW 191
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+++++G +G EA+D + M+++G+ D +M LI A +G + G +HG+ IR
Sbjct: 192 NAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIR 251
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
D ++T+L+D+Y +D A VF M ++ W +++GF+ ++
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKH 311
Query: 266 LMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYS 323
+M + DS+ L+ L +C+ G L+ G+ +H ++ F N+ +G++VIDMY+
Sbjct: 312 FNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
CG A+ F M +D++ WN +IA G++G+G +A+ LFLQM + + PD STF S
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A SH+G+V EG F MV P +HYAC++D+L RAG+++ A +++M +
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P V+ LL C H +G ++++K+ ++ P+D G + L+SN +A+ WE V R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
++R +KK PG+S +E+N E++ F+ +K H QY I +LK L L+++
Sbjct: 552 ASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIK 602
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 199/369 (53%), Gaps = 4/369 (1%)
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L DLK ++I + + G ++ F+ +S++N YV CG + +A F K++V W+ +
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+GL N EA+D ++ M + V + ++ A A+LG R SVH + +R
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V+T+LVDMY+K G + +A +F++MS N+V+W A++SG++ +G + ++L
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G D +++S + A +G L++G IHG+ +R ++ + + T+++D+Y
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLS 386
A +F +M +D+ +W +++ + H + A+ F +M+ +K D +LS
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+ SHSG +++GR L + K + ++D+ A G +E+A + M E +
Sbjct: 334 SCSHSGALQQGRRVHALAI-KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDV 391
Query: 447 AVWVALLSG 455
W A+++G
Sbjct: 392 VCWNAMIAG 400
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
++ +Y N + A ++F E+ ++ V + ++ +S + +N+M+ ++++
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKL 323
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS L +C L+ G + A++ + N++FVGS+++++Y CG + +A F
Sbjct: 324 DSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF 383
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M KD+VCW++MI G NG +A+D + +MK G+D DE + ++ AC+ G
Sbjct: 384 YGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVY 443
Query: 195 FGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNM 238
GL + + ++ ++ +++ ++D+ + G LD A NM
Sbjct: 444 EGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNM 488
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 300/561 (53%), Gaps = 2/561 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ +P R ++++++ Y+ ++ E L+ M++E
Sbjct: 53 LLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEK 112
Query: 76 SSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S A+ + VS+ + L MGE++ V+ G + V V +S++ +Y K G M A F
Sbjct: 113 SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF 172
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E + ++ + WS+MI G NG+ AV + +M G E +G++ A +DLG
Sbjct: 173 ESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALA 232
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG ++ + + V+++LVDMYAK G + A F + ++IV W A++SG
Sbjct: 233 VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHV 292
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG L L M G P ++ S L ACA I L+ GK +H V+
Sbjct: 293 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 352
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G+++ MYSKCG ++F ++ RD+I+WN II+ + +G G AL LF +M
Sbjct: 353 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 412
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ TF ++L A SH GLV+ G +F LM Y + P HYACMVD+L+RAG ++EA
Sbjct: 413 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 472
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++S++ + G +W +L C + + F +G +++++L D + L+SN +A +
Sbjct: 473 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQ 532
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+KW +V VR MR G+ K PG S VE+N +H F++ ++ H + E+I L++L M
Sbjct: 533 RKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHM 592
Query: 554 RAISSWLQGHMEEHEEHDPLS 574
+ + EE PL+
Sbjct: 593 KDEGYHSSSKLSFDEELGPLA 613
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 189/349 (54%), Gaps = 4/349 (1%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
++V+V +S+LN+Y K G +++A F+ M +++ WS+M+ G EA D ++ M
Sbjct: 45 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 104
Query: 169 KKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+E + E V ++ A + G +HG ++ L V V+ SLV MYAK G
Sbjct: 105 LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGC 164
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+ A HVF++ N +TW A+I+G+AQNG A S + + +M + GF P + V L A
Sbjct: 165 MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 224
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
+ +G L +GK HG V+ F+ + + ++++DMY+KCG + A+ FDQ+ D++ W
Sbjct: 225 SSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLW 284
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+++ + +G EEAL+L+ +M + + P ST AS L A + +E G+ +V
Sbjct: 285 TAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIV- 343
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
KY + + + + ++ G +E+ + + + +A W +++SG
Sbjct: 344 KYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA-WNSIISG 391
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 170/329 (51%), Gaps = 2/329 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + + ++ +Y + +A +FE R T++++I Y++
Sbjct: 140 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 199
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +++QM P TF L A L L +G++ V+LG+ ++V S+++++
Sbjct: 200 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 259
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A F+++ D+V W++M++G V NG+ EA+ Y RM KEGI + +
Sbjct: 260 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 319
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ACA + G +H ++ L L V ++L MY+K G+L+ VF+ +
Sbjct: 320 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 379
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W ++ISGF+QNG L+L EM+ G PD+++ ++ L AC+ +G + G
Sbjct: 380 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 439
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGV 327
+ + L ++D+ S+ G+
Sbjct: 440 FSLMTKDYGLTPRLDHYACMVDILSRAGM 468
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 296/555 (53%), Gaps = 34/555 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F+ + + +N++ ++ P L LY MI + P+S TF LK+C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK------------ 136
K G++I ++LG D++V +S++++YV+ G++ +A F+K
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 137 -------------------MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ KD+V W++MI+G G +EA++ +K M K + DE
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
M+ ++ ACA G G VH + ++K+ +L+D+Y+K G L+ A +F+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++++W LI G+ L L L EM G P+ V+++S L ACA +G + +G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 298 KSIHGYTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+ IH Y +R L TS+IDMY+KCG A +F+ + + L SWN +I +
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG + + LF +M + ++PD TF LLSA SHSG+++ GR+ F M YK+ P
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY CM+DLL +G +EA ++++ M EP +W +LL C H +GE A+ ++K
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+ P++ G + L+SN +A +W EVA R + GMKKVPG S +E++ +H FI+ DK
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 535 SHNQYEDIVYVLKKL 549
H + +I +L+++
Sbjct: 627 FHPRNREIYGMLEEM 641
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 168/287 (58%), Gaps = 2/287 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + I +A+KLF+E+P++ V ++N++I Y+ + E L L+ M+K +VRPD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST + AC +++G ++ + G+G+++ + +++++LY KCG++ A FE
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ KD++ W+++I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 196 GLSVHGYSIRRHLNLD--VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y +R + ++TSL+DMYAK G ++ A VF ++ ++ +W A+I GF
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
A +G A ++ +L M+ G +PD ++ V L AC+ G L LG+ I
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 216/446 (48%), Gaps = 48/446 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK---MNEAMVAFEKMQR 139
L C +L L++ I + +++G N + S ++ + + A+ F+ +Q
Sbjct: 40 LHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+L+ W++M G + P A+ Y M G+ + ++++CA + G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF------------------------ 235
HG+ ++ +LD+ V TSL+ MY + G L+ A VF
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 236 KNMSRI-------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+N ++ ++V+W A+ISG+A+ G LEL +M PD ++V+ + AC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
AQ G ++LG+ +H + F NL + ++ID+YSKCG A LF+++ +D+ISWN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y +EAL LF +M+ + P+ T S+L A +H G ++ GR W + + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR-WIHVYIDK 395
Query: 408 Y--KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK---- 461
+ ++D+ A+ G++E A ++ +S+ L+ W A++ G H +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAS 454
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVS 487
F + ++ K + + PDD+ L+S
Sbjct: 455 FDLFSRMRK--IGIQPDDITFVGLLS 478
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY ++ +A LFE LP + V ++N++I Y+ E L L+ +M++
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 73 RPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
P+ T L AC L + +G ++ G N + +S++++Y KCG + A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F + K L W++MI G +G+ + D + RM+K GI D++ +GL+ AC
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC--- 480
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT----- 245
+ +G LDL H+F+ M++ +T
Sbjct: 481 --------------------------------SHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+G +I +GL E++ M+ EPD V S L AC G ++LG+S
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEM---EPDGVIWCSLLKACKMHGNVELGESF 560
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 317/586 (54%), Gaps = 38/586 (6%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKN--DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
IKT LS+ + ++I K D+ ARK+F+E+P V +N++I YSR
Sbjct: 59 IKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSES 118
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSML 118
+ LY M+ +++PD TF LK M LK G+ + AV G+ +++FV +
Sbjct: 119 GVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFI 178
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK--EGIDAD 176
+L+ CG +N A F+ ++V W+ +++G + E+ + M+K E + +
Sbjct: 179 HLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPN 238
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHVF 235
V ++ ++ AC+ L D G ++ I+ + ++ ++ +L+DM+A G +D A VF
Sbjct: 239 SVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVF 298
Query: 236 KNMSRINIVTWGALISGFAQN---GLA----------------------------GSTLE 264
M ++++W ++++GFA LA L
Sbjct: 299 DEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLT 358
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
L +MQ +PD ++VS L ACA +G L+LG+ Y + + + +G ++IDMY
Sbjct: 359 LFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYF 418
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A+ +F++MQ +D +W +I +GHGEEAL++F M+E V PD T+
Sbjct: 419 KCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIG 478
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
++ A +H GLV +G+++F M ++ I+P HY CMVDLL RAG ++EAL+++ +M +
Sbjct: 479 VMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVK 538
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P VW +LL C HK + E A ++L+L P++ ++ L+ N +A +KW+ + VR
Sbjct: 539 PNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVR 598
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
K M + G+KK+PG S++E+NG ++ F+ DKSH Q ++I L+ +
Sbjct: 599 KMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENM 644
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 291/526 (55%), Gaps = 20/526 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K+F+E+P+R + ++NS++ Y L + +M++ + D AL AC
Sbjct: 178 AEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSI 237
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L+ G EI + + D+ V +S++++Y KCGK++ A F ++ K++V W++M
Sbjct: 238 EHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAM 297
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G+ + + + D + M+ L+ +C+ G G S+HG++IR+
Sbjct: 298 IGGM---------------QEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMF 342
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ ++T+LVDMY K G L LA HVF M+ N+V+W +++ + QN L++
Sbjct: 343 LPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQH 402
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
+ + +PD++++ S L A A++ GK IH Y ++ N + +++ MY+KCG
Sbjct: 403 ILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGD 462
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR FD M +D++SWN +I +Y IHG G ++ F +M KP+ STF SLL+A
Sbjct: 463 LQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTA 522
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
S SGL++EG +F+ M +Y I P +HY CM+DLL R G ++EA ++ M P
Sbjct: 523 CSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTAR 582
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
+W +LL+ NH + E A+ +L L D+ G + L+SN +A +WE+V ++ M+
Sbjct: 583 IWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMK 642
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKL 549
+ G+ K G S+V++NG +FI +D+SH Y+ + +LKK+
Sbjct: 643 EQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKI 688
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 225/414 (54%), Gaps = 17/414 (4%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
+A +FE++ +N II Y+ E + Y +M E +R D+ TF +KAC
Sbjct: 76 NALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACG 135
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L+ L +G+++ K +++G+ DV+V + ++++Y+K G + A F++M +DLV W+S
Sbjct: 136 ELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNS 195
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M++G +G ++ +K M + G AD M+ + AC+ R G+ +H IR
Sbjct: 196 MVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSE 255
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L LD+ VQTSL+DMY K G +D A VF + NIV W A+I G ++
Sbjct: 256 LELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDD---------- 305
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
PD +++++ L +C+Q G L GKSIHG+ +R+ F LVL T+++DMY KCG
Sbjct: 306 -----KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCG 360
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
A +F+QM ++++SWN ++A+Y + +EAL +F ++ +KPD T AS+L
Sbjct: 361 ELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLP 420
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
A++ EG+ ++ K + +V + A+ G+++ A + D M
Sbjct: 421 AVAELASRSEGKQIHSYIM-KLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGM 473
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 21/385 (5%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
L ND+ + + +V+ G M A+ FEKM D W+ +I G NG +EA+D
Sbjct: 53 LARPNDLNITRDLCG-FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDF 111
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
Y RM+ EGI +D +I+AC +L G VHG I+ +LDV V L+DMY K
Sbjct: 112 YYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLK 171
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G ++LA VF M ++V+W +++SG+ +G S+L EM G + D ++SA
Sbjct: 172 IGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISA 231
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L AC+ L+ G IH +R + ++++ TS+IDMY KCG A +F+++ S+++
Sbjct: 232 LGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNI 291
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
++WN +I G +E + V PD T +LL + S SG + EG+
Sbjct: 292 VAWNAMI------GGMQE---------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGF 336
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
+ K + P +VD+ + GE++ A + + M+ E + W +++ ++++
Sbjct: 337 AIRKMFL-PYLVLETALVDMYGKCGELKLAEHVFNQMN-EKNMVSWNTMVAAYVQNEQYK 394
Query: 464 IGEKVAKKVLK--LNPDDLGIHALV 486
K+ + +L L PD + I +++
Sbjct: 395 EALKMFQHILNEPLKPDAITIASVL 419
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 308/565 (54%), Gaps = 46/565 (8%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
YN +I A ++ E+ +VL L++++ K+ + PD+ T KA L + GE++ V
Sbjct: 84 YNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKVHGYVV 143
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ G+ D V +S++ +Y GKM A F+++ +D+V W+ +I+ V + + +A+
Sbjct: 144 KSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIA 201
Query: 164 AYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
++RM++E + ADE ++ + AC+ L + G +H Y + L + K+ +L+DMY
Sbjct: 202 VFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRY-VDAELEMTTKIGNALLDMY 260
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG------------------------- 257
K G +D A +F M N++ W +++SG+A NG
Sbjct: 261 CKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMIN 320
Query: 258 ------LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDF 310
L L+L +MQ PD+ LV+ L CAQ G L+ GK +HGY
Sbjct: 321 GYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITL 380
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ V+GT+++D+Y+KCG A +F +M+ RD SW +I ++G +AL F QM
Sbjct: 381 DRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQME 440
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG-- 428
E +PD TF +L+A +H GLVEEGR +FD M YKIQP +HY+C++DLL RAG
Sbjct: 441 EAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLL 500
Query: 429 -EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
E E L+++ S++ + ++ +LLS C N+ + E+V +++ ++ D +H L++
Sbjct: 501 DEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLA 560
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
+ +A +WE+V VR+ M++ G++K PG S +EVNG LH F++ SH + +DI VL
Sbjct: 561 SVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLG 620
Query: 548 KLYLEMRAISSWLQGHMEEHEEHDP 572
+ ++ W+ G E E +P
Sbjct: 621 Q-------VTKWMLGLEREGIESEP 638
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 162/315 (51%), Gaps = 33/315 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
++ +YG + A+K+F+E+P R V ++N +I +Y + + ++ +M +E +++
Sbjct: 155 VMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKA 214
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D +T L AC L + ++GEEI R V+ +G+++L++Y KCG +++A F
Sbjct: 215 DEATVVSTLSACSVLRNQEVGEEIHR-YVDAELEMTTKIGNALLDMYCKCGCVDKARAIF 273
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR--------------------------- 167
++M K+++CW+SM++G NG EA + ++R
Sbjct: 274 DEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALK 333
Query: 168 ----MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
M+ + + D +++ L++ CA G G +HGY + LD V T+LVD+YA
Sbjct: 334 LFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYA 393
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G ++ A VF M + +W ++I G A NG+ L+ +M+ GF PD ++ +
Sbjct: 394 KCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIG 453
Query: 284 ALLACAQIGFLKLGK 298
L AC G ++ G+
Sbjct: 454 VLTACNHGGLVEEGR 468
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 164/351 (46%), Gaps = 36/351 (10%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+Q LV ++ MI + + R+ + + ++K+G++ D + + +A LG G
Sbjct: 76 VQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEG 135
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
VHGY ++ D V S++ MY G +++A VF + ++V+W LIS + +
Sbjct: 136 EKVHGYVVKS--GFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGH 193
Query: 257 GLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+ + M + + D ++VS L AC+ + ++G+ IH Y + +G
Sbjct: 194 RKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMTTKIG 253
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH----------------- 358
+++DMY KCG ARA+FD+M ++++I W +++ Y +G
Sbjct: 254 NALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIV 313
Query: 359 --------------GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
+EAL LF +M ++PD+ +LL + +G +E+G+ W
Sbjct: 314 LWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGK-WLHGY 372
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + I +VD+ A+ G VE+AL++ M E A W +++ G
Sbjct: 373 IHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMK-ERDTASWTSVIYG 422
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 16/279 (5%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+Q+C + +H R L N+D + L G + A V +
Sbjct: 22 LLQSCESMAHL---TQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQS 78
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+V + +I A++ L L E++ G PD+ +L A +G + G+ +
Sbjct: 79 PCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKV 138
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
HGY V+ F+ + SV+ MY G A+ +FD++ RD++SWNV+I+SY H E
Sbjct: 139 HGYVVKS-GFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFE 197
Query: 361 EALSLFLQM-IETMVKPDHSTFASLLSA---LSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
+A+++F +M E+ +K D +T S LSA L + + EE + D +++ T K
Sbjct: 198 DAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDA-----ELEMTTKI 252
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ + G V++A I D M + + W +++SG
Sbjct: 253 GNALLDMYCKCGCVDKARAIFDEMGNK-NVICWTSMVSG 290
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 278/484 (57%), Gaps = 5/484 (1%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M + + D+ T++ +K C+ ++ + GY F+ ++++N+YVK G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++EA F++M +++V W++MI+ + +A+D M +EG+ + +++A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C L + R +HG ++ L DV V+++L+D Y+K G A +VF M ++V W
Sbjct: 127 CDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++I GFAQN TL L M+ F D +L S L AC + L+LG+ +H + V
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVH-VL 242
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSL 365
++D +L+L +++DMY KCG A LF +M + +D+ISW+ +IA +G +AL L
Sbjct: 243 KYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKL 302
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F M KP++ T +L A SH+GLV +G Y+F M + I P +HY C++DLL
Sbjct: 303 FEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLG 362
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG+++EA+K++ M+ EP W LL C HK + AK++LKL+P D G + L
Sbjct: 363 RAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYIL 422
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN +A QKWE+VA VR+ MR G+KK PG S +EV+ ++HAFI+ D SH + E+I
Sbjct: 423 LSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRE 482
Query: 546 LKKL 549
L +L
Sbjct: 483 LSQL 486
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 193/357 (54%), Gaps = 13/357 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I +Y + AR LF+E+P R V ++ ++I AYS + L M++E V
Sbjct: 54 INTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGV 113
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP+ T++ L+AC L++L+ ++ +++G +DVFV S++++ Y K G+ ++A+
Sbjct: 114 RPNMYTYSSVLRACDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALN 170
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M DLV W+S+I G N E + YKRMK+ AD+ + +++AC L
Sbjct: 171 VFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLAL 230
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSRINIVTWGALIS 251
G VH + ++ + D+ + +L+DMY K G L+ A+ +F + M+ ++++W +I+
Sbjct: 231 LELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIA 288
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G AQNG + L+L M+S G +P+ ++++ L AC+ G + G + + + F
Sbjct: 289 GLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG--WYYFQSMKEHFG 346
Query: 312 LVLGTS----VIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEAL 363
+ G +ID+ + G A L +M D ++W +++ + +H + + A+
Sbjct: 347 IDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAI 403
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 7/293 (2%)
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
A + M + + AD + LI+ C G + VH + + +L++MY
Sbjct: 3 AMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYV 62
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G LD A ++F M N+V+W +IS ++ + L L+ L+ M G P+ + S
Sbjct: 63 KFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSS 122
Query: 284 ALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC G L L + +HG ++ + ++ + +++ID YSK G A +F++M + D
Sbjct: 123 VLRACD--GLLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGD 179
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
L+ WN II + + G+E L L+ +M D ST S+L A + L+E GR
Sbjct: 180 LVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQ-VH 238
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ V KY + ++D+ + G +E+A + M TE + W +++G
Sbjct: 239 VHVLKYDQDLILNN--ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 279/486 (57%), Gaps = 3/486 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + AR++F + R V ++N++I + + P E L ++N M+ V PD
Sbjct: 225 LLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPD 284
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T AL +C L +L++G ++ + + + V ++++++Y +CG M+EA + F
Sbjct: 285 SATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFA 344
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + KD++ W+SMING + NG + A+ M+ +G+ + V + L+ ACA L +
Sbjct: 345 ETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQ 404
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H + +R+ L+ DV V T+L+DMYAK + + VF S V W AL+SG
Sbjct: 405 GKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIH 464
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N LA + L M E + + S + A A + LK ++H Y VR F + +
Sbjct: 465 NELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAV 524
Query: 315 GTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
T +IDMYSKCG A +FD++ + +D+I W+V+IA YG+HGHGE A+ LF QM+ +
Sbjct: 525 ITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHS 584
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++P+ TF S+L A SH GLV++G F M+ Y P HY C+VDLL RAG ++E
Sbjct: 585 GMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDE 644
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A ++ SM + ++W ALL C H+ +GE A+++ +L P+ G + L++N +A
Sbjct: 645 AYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAA 704
Query: 493 EQKWEE 498
+W++
Sbjct: 705 VGRWKD 710
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 239/441 (54%), Gaps = 26/441 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
ARKLF++L + +N+II Y K F+ L +++ MI PD TF + +KAC
Sbjct: 136 ARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACS 195
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L +G I +A+ G+ +++FV +S+L +Y+ CGK+ A F M ++ +V W++
Sbjct: 196 VMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNT 255
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI+G NG+P EA+ + M ++ D ++ + +C L + G+ VH + H
Sbjct: 256 MISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNH 315
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L ++V+ +LVDMY++ G +D AS VF +++TW ++I+G+ NG A S L L
Sbjct: 316 LQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCP 375
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
MQ G P++V+L S L ACA + LK GKS+H + +R + D ++++ T++IDMY+KC
Sbjct: 376 AMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCN 435
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
S + +F + + + WN +++ + EA+ LF M+ V+ +H+TF S++
Sbjct: 436 AVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIP 495
Query: 387 ALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
A + HS LV G +SK + ++D+ ++ G ++ A K
Sbjct: 496 AYAILADLKQVMNLHSYLVRSG------FISKIAV------ITGLIDMYSKCGSLDYAHK 543
Query: 436 IVDSMST-EPGLAVWVALLSG 455
I D + E + VW L++G
Sbjct: 544 IFDEIPNKEKDIIVWSVLIAG 564
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 4/349 (1%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
N + + S + Y CG + A F+ + L W+++I V G +A+ + M
Sbjct: 115 NFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSM 174
Query: 169 KKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
G D+ +I+AC+ + G+ +HG ++ + ++ VQ SL+ MY G
Sbjct: 175 ICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK 234
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+ LA VF M + ++V+W +ISG+ QNG L + M EPDS ++VSAL +
Sbjct: 235 VGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPS 294
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C + L+LG +H + + + +++DMYS+CG A +F + + +D+I+W
Sbjct: 295 CGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITW 354
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+I Y ++G+ + AL+L M V P+ T ASLLSA + +++G+ V
Sbjct: 355 TSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKS-LHAWVM 413
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ K+ ++D+ A+ V + ++ S + + W ALLSG
Sbjct: 414 RKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVP-WNALLSG 461
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y N + + ++F + ++ +N+++ E E +GL+ M+ E+V
Sbjct: 424 VTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEV 483
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ +TF + A L DLK + V G+ + + V + ++++Y KCG ++ A
Sbjct: 484 EANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHK 543
Query: 133 AFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+++ + KD++ WS +I G +G AV + +M G+ +E+ ++ AC+
Sbjct: 544 IFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHR 603
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQ-TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
G GL++ Y I + + + T +VD+ + G LD A + K+M + N WGA
Sbjct: 604 GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 663
Query: 249 LI 250
L+
Sbjct: 664 LL 665
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 86/220 (39%), Gaps = 48/220 (21%)
Query: 298 KSIHGYTVRR---FDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
K +HG+T+ N + L + + Y+ CG AR LFD + L WN II Y
Sbjct: 99 KILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMY 158
Query: 354 GIHGHGEEALSLFLQMIET-MVKPDHSTFA------------------------------ 382
G +AL +F MI + PD TF
Sbjct: 159 VDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSN 218
Query: 383 -----SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
SLL+ + G V R F++M+ + + + M+ + G EEAL +
Sbjct: 219 MFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVS-----WNTMISGWFQNGRPEEALAVF 273
Query: 438 DSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+SM EP A V+ L C + K+ +G KV K V K
Sbjct: 274 NSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQK 313
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 293/538 (54%), Gaps = 5/538 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A K FE + R ++N+II+ Y ++E L+ +MI + + PD
Sbjct: 359 LIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPD 418
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC ++ L+ G++ +V+LG ++F GSS++++Y KCG + +A +
Sbjct: 419 EVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYS 478
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + +V +++I G +E+++ M+ G+ E+ LI C
Sbjct: 479 SMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVIL 537
Query: 196 GLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGF 253
GL +H ++R L + + TSL+ MY + L A+ +F S + +IV W ALISG
Sbjct: 538 GLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGH 597
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QN + L L EM+ PD + V+ L ACA + L G+ IH FD +
Sbjct: 598 IQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDE 657
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY+KCG + +F+++ ++ D+ISWN +I + +G+ + AL +F +M +
Sbjct: 658 LTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQ 717
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ + PD TF +L+A SH+G V EGR FD+MV+ Y I+P HYACMVDLL R G ++
Sbjct: 718 SCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLK 777
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + +D + EP +W LL C H G++ AKK+++L P + L+SN +A
Sbjct: 778 EAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYA 837
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W+E +R+TM K ++K+PG S + V E + F+ D SH+ Y++I LK L
Sbjct: 838 ASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHL 895
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 217/437 (49%), Gaps = 6/437 (1%)
Query: 22 GKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
GK D A +LF+++P+ R V +N +I +++ E L ++QM K V+ ST
Sbjct: 163 GKLD--DACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTL 220
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
L A SL L G + A++ G+ + ++V SS++N+Y KC ++A F+ + +
Sbjct: 221 ASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQ 280
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
K+++ W++M+ NG ++ + M GI DE ++ CA G +
Sbjct: 281 KNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQL 340
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H I++ ++ V +L+DMYAK G L A F++M+ + ++W A+I G+ Q +
Sbjct: 341 HSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVE 400
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L M G PD VSL S L AC I L+ G+ H +V+ + NL G+S+
Sbjct: 401 AGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSL 460
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
IDMYSKCG A + M R ++S N +IA Y + + +E+++L +M +KP
Sbjct: 461 IDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSE 519
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TFASL+ S V G +V + + +E ++ + + + +A +
Sbjct: 520 ITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFS 579
Query: 439 SMSTEPGLAVWVALLSG 455
S+ + +W AL+SG
Sbjct: 580 EFSSLKSIVMWTALISG 596
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 238/470 (50%), Gaps = 7/470 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG AR++F+ + + + +N+++ YS+ V+ L+ MI + PD
Sbjct: 258 LINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPD 317
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+T L C L++G ++ ++ + +++FV ++++++Y K G + EA FE
Sbjct: 318 EFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFE 377
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D + W+++I G V A ++RM +GI DEV + ++ AC ++
Sbjct: 378 HMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEA 437
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G H S++ L ++ +SL+DMY+K G + A + +M ++V+ ALI+G+A
Sbjct: 438 GQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYAL 497
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
S + LL EMQ G +P ++ S + C + LG IH V+R +
Sbjct: 498 KNTKES-INLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEF 556
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
LGTS++ MY + A LF + S + ++ W +I+ + + + AL+L+ +M +
Sbjct: 557 LGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDN 616
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ PD +TF ++L A + + +GR L+ E + +VD+ A+ G+V+
Sbjct: 617 NISPDQATFVTVLQACALLSSLHDGREIHSLIFHT-GFDLDELTSSALVDMYAKCGDVKS 675
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDL 480
++++ + ++T+ + W +++ G + KV ++ + + PDD+
Sbjct: 676 SVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDV 725
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 185/409 (45%), Gaps = 43/409 (10%)
Query: 52 SRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV 111
++ S VL Y + PD TF V L AC L +L +G + ++ G +
Sbjct: 23 TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTS 82
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL--VCWSSMINGLVFNGQPREAVDAYKRMK 169
F ++++LY KC + A F L V W+++I+G V G P EA+ + +M+
Sbjct: 83 FCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR 142
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ D+V ++ ++ A Y G LD
Sbjct: 143 NSAV-PDQVALVTVLNA-----------------------------------YISLGKLD 166
Query: 230 LASHVFKNMSRI--NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A +F+ M N+V W +ISG A+ L +M G + +L S L A
Sbjct: 167 DACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSA 226
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
A + L G +H + +++ F+ ++ + +S+I+MY KC +P AR +FD + +++I W
Sbjct: 227 IASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVW 286
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N ++ Y +G + LFL MI + PD T+ S+LS + +E GR ++
Sbjct: 287 NAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIK 346
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K + A ++D+ A+AG ++EA K + M+ ++ W A++ G
Sbjct: 347 KRFTSNLFVNNA-LIDMYAKAGALKEAGKHFEHMTYRDHIS-WNAIIVG 393
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 286/542 (52%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y + ARK+F+ +P R V T+NS+I AYS E E ++ +M E R D
Sbjct: 51 LVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCD 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L ACV+ +L+ G+ + E + D+FVG++++ +Y +C A F
Sbjct: 111 RVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFG 170
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M++K+L+ WS++I +G EA+ ++ M++EGI + V + L+
Sbjct: 171 RMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 230
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAK--TGHLDLASHVFKNMSRINIVTWGALISGF 253
+H L+ + +LV++Y + TG LD+A + + M I W LI+G+
Sbjct: 231 LSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGY 290
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+G + LE +Q D V+ +S L AC L GK IH V D ++
Sbjct: 291 TLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 350
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ ++ +MYSKCG AR +FD M R +SWN ++ +Y HG EE L L +M +
Sbjct: 351 IVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQE 410
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK + TF S+LS+ SH+GL+ EG +F + I+ +HY C+VDLL RAG+++E
Sbjct: 411 GVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQE 470
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K + M +EP + W +LL C HK G+ A+K+L+L+P + ++SN ++
Sbjct: 471 AEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSE 530
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W+ A +R+ M +KKVPG S ++V ++H F + D SH + +I +++L
Sbjct: 531 RGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFA 590
Query: 553 MR 554
MR
Sbjct: 591 MR 592
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 201/423 (47%), Gaps = 8/423 (1%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+ E V+ + TF L + V L+ G+ I E + DVFV ++++N Y KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +A F+ M + + W+SMI+ + + EA ++RM+ EG D V + ++ A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C + + + G V LD+ V T+L+ MYA+ + A+ VF M + N++TW
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TV 305
A+I+ FA +G G L MQ G P+ V+ +S L L+ IH T
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240
Query: 306 RRFDFNLVLGTSVIDMYSKC--GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
D + +++++Y +C G A + +M + + +WNV+I Y +HG EAL
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+ ++ + D TF S+L+A + S + EG+ V + + + ++
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV-ECGLDSDVIVKNALTNM 359
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
++ G +E A +I DSM ++ W +L H + E+V K + K+ + + ++
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGE---SEEVLKLIRKMEQEGVKLN 415
Query: 484 ALV 486
+
Sbjct: 416 GIT 418
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 209/665 (31%), Positives = 329/665 (49%), Gaps = 92/665 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ Y ++ A++LF PL DT YN++I AYS L L+ QM +
Sbjct: 77 LLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFL 136
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWR-KAVELGYGNDVFVGSSMLNLYVKCGK------ 126
PD TF+ L A + D + ++ + ++LG V +++L+ YV C
Sbjct: 137 PDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKS 196
Query: 127 ---MNEAMVAFEKMQRKDL---------------------------------VCWSSMIN 150
M A F++ + + V W++MI+
Sbjct: 197 SQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMIS 256
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD----LGDSRFGLSVHGYSIRR 206
G V G EA D ++RM GI DE LI AC +G G VHGY +R
Sbjct: 257 GYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRT 316
Query: 207 HL----NLDVKVQTSLVDMYAK--------------------------TGHLDL-----A 231
+ + + V +L+ Y K +G+++ A
Sbjct: 317 VVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEA 376
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
+ +F M N++TW +ISG AQNG L+L +M+S G EP + A+ AC+ +
Sbjct: 377 NSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVL 436
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
G L G+ IH +R D L G ++I MYS+CGV A ++F M D +SWN +I
Sbjct: 437 GSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMI 496
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
A+ HGHG +A+ LF QM++ + PD TF ++L+A +H+GL++EGR++FD M ++Y I
Sbjct: 497 AALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGI 556
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
P E HYA ++DLL RAG +A ++ SM E G +W ALL+GC H +G + A
Sbjct: 557 TPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAAD 616
Query: 471 KVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
++L+L P G + ++SN +A +W+EVA VR MR+ G+KK PG S VEV +H F+
Sbjct: 617 RLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFL 676
Query: 531 MEDKSHNQYEDIVYVLKKLYLEMRAI-----SSWLQGHME-EHEEHDPLSTAAQYAPTYY 584
++D H + + + L++L EM+ + + ++ ME EH+EH LST ++ Y
Sbjct: 677 VDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHS-LSTHSEKLAVVY 735
Query: 585 LKIRL 589
++L
Sbjct: 736 GIMKL 740
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 182/414 (43%), Gaps = 48/414 (11%)
Query: 9 YGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
Y S +IA Y +D+V+AR+L + L +N++I Y R+ E + +M
Sbjct: 216 YEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMH 275
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMG---------EEIWRKAVELGYGNDVFVGSSMLN 119
++ D T+T + AC S + KMG I R VE + + V ++++
Sbjct: 276 SMGIQEDEYTYTSLISACGSCNE-KMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALIT 334
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSS-------------------------------M 148
Y K +M EA F+KM +D++ W++ M
Sbjct: 335 FYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVM 394
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+GL NG E + + +MK EG++ + G I AC+ LG G +H IR
Sbjct: 395 ISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGH 454
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + +L+ MY++ G ++ A VF M ++ V+W A+I+ AQ+G +EL +
Sbjct: 455 DSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQ 514
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG----TSVIDMYSK 324
M PD ++ ++ L AC G +K G+ H + + + G +ID+ +
Sbjct: 515 MMKEDILPDRITFLTILTACNHAGLIKEGR--HYFDTMCTRYGITPGEDHYARLIDLLCR 572
Query: 325 CGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
G+ A+++ M W ++A IHG+ E + +++E + D
Sbjct: 573 AGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQD 626
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFD--QMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++V T+++ YS G A+ LF+ + RD +S+N +I +Y G AL+LF+Q
Sbjct: 70 DIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ 129
Query: 369 MIETMVKPDHSTFASLLSALS 389
M PD TF+S+LSALS
Sbjct: 130 MKRYGFLPDPFTFSSVLSALS 150
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 287/495 (57%), Gaps = 2/495 (0%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLM 90
K+F + P++ + +++++ A + E ++ M + V P+ + L AC ++
Sbjct: 144 KIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVG 203
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
L G+EI +++ + V +S++++Y KC +M+ F+++ KDL+ W+++I
Sbjct: 204 ALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIR 263
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
G + N PREA A+ RM+ ADE ++ LI A + +FG++ HG+ ++ L
Sbjct: 264 GCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLA 323
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
V + T+L+ MYAK G L+ A VF +++ + ++W A+IS A + + LE +MQ
Sbjct: 324 FVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQ 383
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
S P+ ++ VS L AC+ IG +LG+SI + + + N L +++ID+Y K G +
Sbjct: 384 STDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRIN 443
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
RA+F+++ ++DL+ W+ +I YG++G G+EAL F M+ VKP+ F S+LSA S
Sbjct: 444 QGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACS 503
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H GL EG F M KY I P HYACMVDL++R G +E AL+ V+ M EP +W
Sbjct: 504 HCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIW 563
Query: 450 VALLSGCHN-HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
ALL+GC + H I E VA++++ L+P + + ++SN +A + +W +V +RK + +
Sbjct: 564 GALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDE 623
Query: 509 SGMKKVPGYSVVEVN 523
G+KK GYS++E
Sbjct: 624 KGLKKEMGYSMIEAQ 638
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 213/463 (46%), Gaps = 38/463 (8%)
Query: 28 SARKLFEELPLRGVDT--------YNSIIIAYSRKESPFE-------------------- 59
+A K+FEE+ R V Y S+ Y+ E P E
Sbjct: 7 NAYKVFEEITQRNVFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLVK 66
Query: 60 ------VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFV 113
+GL+ M+ + RP+ T ++A L M I ++LG+ ++V V
Sbjct: 67 QNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSV 126
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
++++ Y M F + KDLV WS+M++ V +GQ EA + ++ M+ +G+
Sbjct: 127 ATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGV 185
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
+ + V ++ ++ ACA++G FG +HG+SI++ + V SLVDMYAK + +
Sbjct: 186 EPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASML 245
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF + ++++W +I G +N + MQ F D + ++A Q
Sbjct: 246 VFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADE 305
Query: 294 LKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
K G + HG+ ++ V +GT+++ MY+K G A +FDQ+ +D ISW+ +I+
Sbjct: 306 HKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISV 365
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+ H AL F QM T +P+ TF SLL A S G E G +K
Sbjct: 366 HAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGES-IQAHATKAGYLS 424
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++DL + G + + I + + T+ L W ++++G
Sbjct: 425 NAFLSSALIDLYCKFGRINQGRAIFNEIPTK-DLVCWSSMING 466
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 147/283 (51%), Gaps = 5/283 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L A+ + ++ +Y ++ SA +F++L + +++++I ++ P+
Sbjct: 316 LLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNA 375
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + QM D RP+ TF L+AC + ++GE I A + GY ++ F+ S++++L
Sbjct: 376 LETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDL 435
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G++N+ F ++ KDLVCWSSMING NG EA++ + M G+ +EVV
Sbjct: 436 YCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVF 495
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ ++ AC+ G G S S+ + + K+ +VD+ ++ G+++ A M
Sbjct: 496 ISVLSACSHCGLEHEGWSCFS-SMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 554
Query: 239 S-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+ WGAL++G + EL+ E + G +P + S
Sbjct: 555 PMEPDKRIWGALLAGCRSTHGSIEIAELVAE-RLIGLDPQNTS 596
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 300/561 (53%), Gaps = 2/561 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ +P R ++++++ Y+ ++ E L+ M++E
Sbjct: 159 LLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEK 218
Query: 76 SSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S A+ + VS+ + L MGE++ V+ G + V V +S++ +Y K G M A F
Sbjct: 219 SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF 278
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E + ++ + WS+MI G NG+ AV + +M G E +G++ A +DLG
Sbjct: 279 ESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALA 338
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG ++ + + V+++LVDMYAK G + A F + ++IV W A++SG
Sbjct: 339 VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHV 398
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG L L M G P ++ S L ACA I L+ GK +H V+
Sbjct: 399 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G+++ MYSKCG ++F ++ RD+I+WN II+ + +G G AL LF +M
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ TF ++L A SH GLV+ G +F LM Y + P HYACMVD+L+RAG ++EA
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++S++ + G +W +L C + + F +G +++++L D + L+SN +A +
Sbjct: 579 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQ 638
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+KW +V VR MR G+ K PG S VE+N +H F++ ++ H + E+I L++L M
Sbjct: 639 RKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHM 698
Query: 554 RAISSWLQGHMEEHEEHDPLS 574
+ + EE PL+
Sbjct: 699 KDEGYHSSSKLSFDEELGPLA 719
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 234/462 (50%), Gaps = 11/462 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGG--KNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESP 57
+K+ +++ +I Y + + +A +F+++P R V ++NS++ SR P
Sbjct: 39 LKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLNPLSRHR-P 97
Query: 58 FEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG-NDVFVGS 115
+ L + M+ V P +F A A G A ++ ++V+V +
Sbjct: 98 LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCT 157
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GID 174
S+LN+Y K G +++A F+ M +++ WS+M+ G EA D ++ M +E +
Sbjct: 158 SLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSE 217
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
E V ++ A + G +HG ++ L V V+ SLV MYAK G + A HV
Sbjct: 218 KSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHV 277
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F++ N +TW A+I+G+AQNG A S + + +M + GF P + V L A + +G L
Sbjct: 278 FESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGAL 337
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+GK HG V+ F+ + + ++++DMY+KCG + A+ FDQ+ D++ W +++ +
Sbjct: 338 AVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGH 397
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G EEAL+L+ +M + + P ST AS L A + +E G+ +V KY +
Sbjct: 398 VQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIV-KYGLGLG 456
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + + ++ G +E+ + + + +A W +++SG
Sbjct: 457 APVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA-WNSIISG 497
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 170/329 (51%), Gaps = 2/329 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + + ++ +Y + +A +FE R T++++I Y++
Sbjct: 246 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 305
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +++QM P TF L A L L +G++ V+LG+ ++V S+++++
Sbjct: 306 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 365
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A F+++ D+V W++M++G V NG+ EA+ Y RM KEGI + +
Sbjct: 366 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 425
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ACA + G +H ++ L L V ++L MY+K G+L+ VF+ +
Sbjct: 426 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 485
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W ++ISGF+QNG L+L EM+ G PD+++ ++ L AC+ +G + G
Sbjct: 486 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 545
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGV 327
+ + L ++D+ S+ G+
Sbjct: 546 FSLMTKDYGLTPRLDHYACMVDILSRAGM 574
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH--VFKNMSRI--NIVTWGAL 249
R G ++H ++++ V SL++ Y+ LA+ VF ++ ++ +W +L
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
++ +++ + + S P S +A A A+ G + H +
Sbjct: 89 LNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 310 F--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+ + TS+++MY K G+ S AR +FD M R+ SW+ ++A Y EEA LF
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 368 QMIETMVKPDHSTF--ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
M+E + S F ++LSA+S + G L+V + + +V + A
Sbjct: 209 LMLEE-CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENS-LVTMYA 266
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+AG + A + +S S E W A+++G
Sbjct: 267 KAGCMGAAFHVFES-SRERNSITWSAMITG 295
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/485 (34%), Positives = 275/485 (56%), Gaps = 2/485 (0%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++ P + + AC +L +I + D F+ +S+++LY KCG + EA
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEA 105
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+KM++KD+V W+S+I G N P EA+ M K + L++A
Sbjct: 106 HKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
DS G +H +++ + DV V ++L+DMYA+ G +D+A+ VF + N V+W ALI
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
SGFA+ G + L + EMQ GFE + S A IG L+ GK +H + V+ R
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+G +++DMY+K G AR +F+++ ++DL++WN ++ ++ +G G+EA+S F +M
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ + + TF +L+A SH GLV+EG+++FD M+ +Y ++P +HY +VDLL RAG
Sbjct: 346 RKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGL 404
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ AL + M EP AVW ALL+ C HK +G+ A V +L+PDD G L+ N
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNI 464
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A W+ A VRK M+ +G+KK P S VE+ +H F+ D +H + E+I + ++
Sbjct: 465 YASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEI 524
Query: 550 YLEMR 554
+++R
Sbjct: 525 SMKIR 529
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 181/346 (52%), Gaps = 8/346 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY +V A K+F+++ + + ++ S+I Y++ + P E +GL M+K +P+
Sbjct: 92 LIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPN 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKA + D +G +I AV+ + DV+VGS++L++Y +CGKM+ A F+
Sbjct: 152 GFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFD 211
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ K+ V W+++I+G G A+ + M++ G +A + A +G
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQ 271
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + ++ L V +++DMYAK+G + A VF+ + ++VTW ++++ FAQ
Sbjct: 272 GKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ 331
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
GL + EM+ G + ++ + L AC+ G +K GK H + + + ++NL
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGK--HYFDMIK-EYNLEPE 388
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+V+D+ + G+ + A +M + W ++A+ +H
Sbjct: 389 IEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 275/485 (56%), Gaps = 2/485 (0%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++ P + + AC +L +I + D F+ +S+++LY KCG + EA
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEA 105
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+KM+ KD+V W+S+I G N P EA+ M K + L++A
Sbjct: 106 HKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAY 165
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
DS G +H +++ + DV V ++L+DMYA+ G +D+A+ VF + N V+W ALI
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
SGFA+ G + L + EMQ GFE + S A A IG L+ GK +H + ++ R
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQK 285
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+G +++DMY+K G AR +F+++ ++DL++WN ++ ++ +G G+EA+S F +M
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ + + +F +L+A SH GLV+EG+++FD M+ +Y ++P +HY +VDLL RAG
Sbjct: 346 RKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGL 404
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ AL + M EP AVW ALL+ C HK +G+ A V +L+PDD G L+ N
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNI 464
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A W+ A VRK M+ +G+KK P S VE+ +H F+ D +H + E+I + ++
Sbjct: 465 YASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEI 524
Query: 550 YLEMR 554
+++R
Sbjct: 525 SMKIR 529
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 182/346 (52%), Gaps = 8/346 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY +V A K+F+++ + + ++ S+I Y++ + P E +GL M+K +P+
Sbjct: 92 LIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPN 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKA + D +G +I AV+ + DV+VGS++L++Y +CGKM+ A F+
Sbjct: 152 GFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFD 211
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ K+ V W+++I+G G A+ + M++ G +A + A A +G
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQ 271
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L V +++DMYAK+G + A VF+ + ++VTW ++++ FAQ
Sbjct: 272 GKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ 331
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
GL + EM+ G + +S + L AC+ G +K GK H + + + ++NL
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGK--HYFDMIK-EYNLEPE 388
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+V+D+ + G+ + A +M + W ++A+ +H
Sbjct: 389 IEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 1 MIKTN--LSAY-GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
MIK+ L+A+ GN+ ++ +Y ++ ARK+FE + + + T+NS++ A+++
Sbjct: 279 MIKSRQKLTAFVGNT---MLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLG 335
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E + + +M K + + +F L AC +K G+ + E ++ ++
Sbjct: 336 KEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTV 395
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVC-WSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++L + G +N A+V KM + W +++ A +K K AD
Sbjct: 396 VDLLGRAGLLNYALVFIFKMPMEPTAAVWGALL----------AACRMHKNAKVGQFAAD 445
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
V + D DS G V Y+I YA TGH D A+ V K
Sbjct: 446 HVFQL-------DPDDS--GPPVLLYNI-----------------YASTGHWDAAARVRK 479
Query: 237 NMSRINI 243
M +
Sbjct: 480 MMKATGV 486
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 287/542 (52%), Gaps = 36/542 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N++I A+S +P L L++QM+ + P+S TF K+C +++ A+
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK--------------------------- 136
+L V +S++++Y + G++ A + F+K
Sbjct: 155 KLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARR 214
Query: 137 ----MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+ KD+V W++MI G V +G+ EA+ + RM++ + ++ M+ ++ AC L
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS 274
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G + + R ++++ +LVDMY+K G + A +F M +++ W +I G
Sbjct: 275 LELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD--- 309
+ L L L M P+ V+ ++ L ACA +G L LGK +H Y +
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 310 --FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+ L TS+I MY+KCG A +F M SR L SWN +I+ ++GH E AL LF
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+MI +PD TF +LSA + +G VE G +F M Y I P +HY CM+DLLAR+
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARS 514
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G+ +EA ++ +M EP A+W +LL+ C H + GE VA+++ +L P++ G + L+S
Sbjct: 515 GKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLS 574
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N +A +W++VA +R + GMKKVPG + +E++G +H F++ DK H Q E+I +L
Sbjct: 575 NIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLD 634
Query: 548 KL 549
++
Sbjct: 635 EV 636
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 205/385 (53%), Gaps = 11/385 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y + + AR+LF+E+P + V ++N++I Y + E L + +M + D
Sbjct: 195 SFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEAD 254
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P+ ST L AC L L++G+ I + G+G ++ + ++++++Y KCG++ A
Sbjct: 255 VSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTAR 314
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ M+ KD++ W++MI G EA+ ++ M +E + ++V + ++ ACA LG
Sbjct: 315 KLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLG 374
Query: 192 DSRFGLSVHGYSIRRHLN-----LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
G VH Y I ++L +V + TS++ MYAK G +++A VF++M ++ +W
Sbjct: 375 ALDLGKWVHAY-IDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASW 433
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+ISG A NG A L L EM + GF+PD ++ V L AC Q GF++LG +
Sbjct: 434 NAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNK 493
Query: 307 RFDFNLVLGT--SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEAL 363
+ + L +ID+ ++ G A+ L M+ D W ++ + IHG E
Sbjct: 494 DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGE 553
Query: 364 SLFLQMIETMVKPDHSTFASLLSAL 388
+ ++ E ++P++S LLS +
Sbjct: 554 YVAERLFE--LEPENSGAYVLLSNI 576
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 200/448 (44%), Gaps = 49/448 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV--KCGKMNEAMVAFEKM--Q 138
L C + LK +I ++ G N +F S ++ ++ A+ F + Q
Sbjct: 32 LAKCPDIPSLK---QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++ W+++I P ++ + +M G+ + L ++CA +
Sbjct: 89 PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKT-------------------------------GH 227
+H ++++ L+L V TSL+ MY++ GH
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+D A +F + ++V+W A+I+G+ Q+G L MQ P+ ++VS L A
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C + L+LGK I + R F NL L +++DMYSKCG AR LFD M+ +D+I W
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW 328
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---WFDL 403
N +I Y EEAL LF M+ V P+ TF ++L A + G ++ G++ + D
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK 388
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC----HNH 459
+ + ++ + A+ G VE A ++ SM + LA W A++SG H
Sbjct: 389 NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLASWNAMISGLAMNGHAE 447
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVS 487
+ + E++ + PDD+ ++S
Sbjct: 448 RALGLFEEMINE--GFQPDDITFVGVLS 473
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 311/578 (53%), Gaps = 30/578 (5%)
Query: 5 NLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY 64
+L Y N+ ++ +Y + A+ LF + + ++N++I + S+ + E L
Sbjct: 465 DLRTYTNNA--LVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYV 522
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVK 123
MI + VRPD T L AC L L++G EI A+ G + FVG++++++Y
Sbjct: 523 YLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCN 582
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMG 182
C + + + F+ + R+ + W++++ G N +A+ + M E +
Sbjct: 583 CKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFAS 642
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ AC +HGY ++R D VQ +L+DMY++ G ++++ +F M++ +
Sbjct: 643 VLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRD 702
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQ------------------SCGFEPDSVSLVSA 284
IV+W +I+G G L LL EMQ F+P+SV+L++
Sbjct: 703 IVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTV 762
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L CA + L GK IH Y V+ + ++ +G++++DMY+KCG + A +FDQM R++
Sbjct: 763 LPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNV 822
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMI------ETMVKPDHSTFASLLSALSHSGLVEEG 397
I+WNV+I +YG+HG GEEAL LF M +++P+ T+ ++ +A SHSG+V+EG
Sbjct: 823 ITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEG 882
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG-LAVWVALLSGC 456
+ F M + + ++P HYAC+VDLL R+G V+EA +++++M + + W +LL C
Sbjct: 883 LHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGAC 942
Query: 457 HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPG 516
H+ GE AK + L P+ + L+SN ++ W++ GVRK M++ G++K PG
Sbjct: 943 RIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPG 1002
Query: 517 YSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S +E E+H F+ D SH Q +++ L+ L MR
Sbjct: 1003 CSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMR 1040
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 203/392 (51%), Gaps = 17/392 (4%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG--NDVFVGSSMLNLYVKCGKMNEAMV 132
D+ F LKA ++ DL +G++I + G+ + V V +S++N+Y KCG + A
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL-G 191
F+ + +D V W+SMI L + ++ ++ M E +D ++ + AC+ + G
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQT--SLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
R G VH Y++R N D++ T +LV MYA+ G ++ A +F ++V+W +
Sbjct: 449 GVRLGKQVHAYTLR---NGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTV 505
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
IS +QN L + M G PD V+L S L AC+Q+ L++G+ IH Y +R D
Sbjct: 506 ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGD 565
Query: 310 F--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N +GT+++DMY C P R +FD + R + WN ++A Y + ++AL LF+
Sbjct: 566 LIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFV 625
Query: 368 QMI-ETMVKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
+MI E+ P+ +TFAS+L A + +EG + + + K + ++D+
Sbjct: 626 EMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY---IVKRGFGKDKYVQNALMDMY 682
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+R G VE + I M+ + W +++GC
Sbjct: 683 SRMGRVEISKTIFGRMNKR-DIVSWNTMITGC 713
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 228/469 (48%), Gaps = 27/469 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG D+ +AR++F+++P R ++NS+I R E L L+ M+ E+V P
Sbjct: 373 LVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPT 432
Query: 76 SSTFTVALKACVSLM-DLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVA 133
S T AC + +++G+++ A L G+ + ++++ +Y + G++N+A
Sbjct: 433 SFTLVSVAHACSHVRGGVRLGKQV--HAYTLRNGDLRTYTNNALVTMYARLGRVNDAKAL 490
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F KDLV W+++I+ L N + EA+ M +G+ D V + ++ AC+ L
Sbjct: 491 FGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERL 550
Query: 194 RFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R G +H Y++R L + V T+LVDMY VF + R + W AL++G
Sbjct: 551 RIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAG 610
Query: 253 FAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+A+N L L +EM S F P++ + S L AC + + IHGY V+R F
Sbjct: 611 YARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGK 670
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM- 369
+ + +++DMYS+ G ++ +F +M RD++SWN +I + G ++AL+L +M
Sbjct: 671 DKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQ 730
Query: 370 -------IETMV----------KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+T V KP+ T ++L + + +G+ V K K+
Sbjct: 731 RRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAV-KQKLAM 789
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ +VD+ A+ G + A ++ D M + W L+ H K
Sbjct: 790 DVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMHGK 837
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 4/322 (1%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
++R+ W ++ + R+A+ Y M D +++A A + D G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 197 LSVHGYSIR--RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H + + V V SLV+MY K G L A VF ++ + V+W ++I+
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVRRFDFNLV 313
+ +L L M S +P S +LVS AC+ + G ++LGK +H YT+R D
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY 469
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++ MY++ G + A+ALF +DL+SWN +I+S + EEAL MI
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+PD T AS+L A S + GR + + +VD+ + ++
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ D + +AVW ALL+G
Sbjct: 590 RLVFDGV-VRRTVAVWNALLAG 610
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 275/515 (53%), Gaps = 33/515 (6%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LFE + +N++I S SP + Y +M+ V P+S TF LK+C +
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM------------------------ 127
+ G++I ++LG +D FV +S++N+Y + G++
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207
Query: 128 -------NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
++A FE++ +D V W++MI G +G+ EA+ ++ MK+ + +E M
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ ACA G G V + L ++++ +L+DMY+K G LD A +F+ +
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I++W +I G++ L L +MQ EP+ V+ VS L ACA +G L LGK I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 301 HGYTVRRFD--FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H Y ++F N L TS+IDMY+KCG A+ +F M+ + L SWN +I+ +HGH
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
AL LF QM + +PD TF +LSA SH+GLVE GR F MV Y I P +HY
Sbjct: 448 ANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYG 507
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CM+DLL RAG +EA ++ +M +P A+W +LL C H +GE AK + +L P+
Sbjct: 508 CMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPE 567
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK 513
+ G + L+SN +A +W++VA +R + GMKK
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 194/353 (54%), Gaps = 4/353 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y + + AR+LFEE+P+R ++N++I Y++ E L + +M + +
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P+ ST L AC L++G + + G G+++ + ++++++Y KCG +++A
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE + KD++ W+ MI G +EA+ +++M++ ++ ++V + ++ ACA LG
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 192 DSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G +H Y ++ L L + + TSL+DMYAK G+++ A VF M ++ +W A+I
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
SG A +G A LEL +M+ GFEPD ++ V L AC+ G ++LG+ V +D
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 311 NLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGE 360
+ L +ID+ + G+ A AL M+ + D W ++ + +HG+ E
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 219/441 (49%), Gaps = 40/441 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV--KCGKMNEAMVAFEKMQRK 140
L C S +LK +I + ++ G N F S ++ G ++ A++ FE +++
Sbjct: 39 LSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ W++MI G + P A+D Y RM G++ + L+++CA +G ++ G +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGH-------------------------------LD 229
G+ ++ L D V TSL++MYA+ G LD
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A +F+ + + V+W A+I+G+AQ+G L EM+ P+ ++V+ L ACA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
Q G L+LG + + NL L ++IDMYSKCG AR LF+ + +D+ISWNV
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I Y +EAL+LF +M ++ V+P+ TF S+L A ++ G ++ G++ + K+
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ ++D+ A+ G +E A ++ M + L W A++SG H ++ ++
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALEL 454
Query: 469 AKKVLK--LNPDDLGIHALVS 487
+++ PDD+ ++S
Sbjct: 455 FRQMRDEGFEPDDITFVGVLS 475
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 302/577 (52%), Gaps = 36/577 (6%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S I++ Y + LF+ +P R ++NS+I Y+ ++ + YN M+K D
Sbjct: 77 SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 136
Query: 72 --VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK------ 123
+ TF+ L +K+G +I V+ G+ + VFVGS ++++Y K
Sbjct: 137 GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 196
Query: 124 -------------------------CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
CG++ ++ F +M+ +D + W+SMI G NG
Sbjct: 197 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 256
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
R+A+D ++ MK E + D+ ++ AC + + G VH Y IR ++ V ++L
Sbjct: 257 RDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASAL 316
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
VDMY K ++ A VFK M+ N+V+W A++ G+ QNG + ++ +MQ G EPD
Sbjct: 317 VDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDD 376
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQ 337
+L S + +CA + L+ G H + + + + +++ +Y KCG + LF++
Sbjct: 377 FTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNE 436
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+ +D ++W +++ Y G E + LF M+ +KPD TF +LSA S +GLVE+G
Sbjct: 437 ISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 496
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
F+ M++++ I P + HY CM+DL +RAG +EEA ++ M P W LLS C
Sbjct: 497 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 556
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
+ IG+ A+ +++L+P + + L+S+ +A + KWEEVA +RK MR G++K PG
Sbjct: 557 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 616
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYV-LKKLYLEM 553
S ++ ++H F +DKS N + D +Y L+KL +M
Sbjct: 617 SWIKYKNQVHVFSADDKS-NPFSDQIYSELEKLNYKM 652
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 188/380 (49%), Gaps = 36/380 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+++ +++L+ Y K G+++E F+ M R+D V W+S+I+G G ++V AY M
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 170 KE--GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
K + + + L+ + G + G +HG+ ++ V V + LVDMY+K G
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 228 LDLASHVFKNMSRINIV-------------------------------TWGALISGFAQN 256
+ A VF + N+V +W ++I+GF QN
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
GL +++ EM+ + D + S L AC + L+ GK +H Y +R + N+ +
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++++DMY KC A A+F +M ++++SW ++ YG +G+ EEA+ F M + ++
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD T S++S+ ++ +EEG + ++ I A +V L + G +E++ +
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNA-LVTLYGKCGSIEDSHR 432
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+ + +S + + W AL+SG
Sbjct: 433 LFNEISFKDEV-TWTALVSG 451
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 164/359 (45%), Gaps = 62/359 (17%)
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ ++ LI + A LG + V + H NL +++ Y+K G + ++F
Sbjct: 43 ETFLLNNLISSYAKLGSIPYACKV--FDQMPHPNL--YSWNTILSAYSKLGRVSEMEYLF 98
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGF 293
M R + V+W +LISG+A GL +++ LM F + ++ + L+ ++ G
Sbjct: 99 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGC 158
Query: 294 LKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFD--------------- 336
+KLG+ IHG+ V+ F F + +G+ ++DMYSK G+ SCAR +FD
Sbjct: 159 VKLGRQIHGHVVK-FGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 217
Query: 337 ----------------QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
+M+ RD ISW +I + +G +A+ +F +M ++ D T
Sbjct: 218 GLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYT 277
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH----YACMVDLLARAGEVEEALKI 436
F S+L+A ++EG+ V Y I+ K + +VD+ + ++ A +
Sbjct: 278 FGSVLTACGGVMALQEGK-----QVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAV 332
Query: 437 VDSMSTEPGLAVWVALLSGCHNH-------KKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
M+ + + W A+L G + K FS +K + PDD + +++S+
Sbjct: 333 FKKMTCK-NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG-----IEPDDFTLGSVISS 385
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 294/557 (52%), Gaps = 42/557 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+ +P R V ++N ++ A S+ E L + M + VR DS+T+T +L AC
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L+ G+++ + + D +V S+++ LY KCG EA F + ++ V W+ +
Sbjct: 283 LSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G + +G E+V+ + +M+ E + D+ + LI C D G +H ++
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFK-------------------------------N 237
V V SL+ MYAK +L A +F+
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDG 462
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKL 296
MS N++TW A++ + Q+G L + M S PD V+ V+ CA +G KL
Sbjct: 463 MSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKL 522
Query: 297 GKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G I G TV+ L+L TS VI MYSKCG AR +FD + +D++SWN +I
Sbjct: 523 GDQIIGRTVK---VGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 579
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y HG G++A+ +F +++ KPD+ ++ ++LS SHSGLV+EG+ +FD+M + I P
Sbjct: 580 YSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISP 639
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+H++CMVDLL RAG + EA ++D M +P VW ALLS C H + E AK V
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHV 699
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+L+ D G + L++ +A K ++ A +RK MR G+KK PGYS +EVN ++H F +
Sbjct: 700 FELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKAD 759
Query: 533 DKSHNQYEDIVYVLKKL 549
D SH Q ++ + KKL
Sbjct: 760 DVSHPQ---VIAIRKKL 773
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 239/526 (45%), Gaps = 69/526 (13%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
A +LF +P R V ++N+++ Y + + L + M + D P++ TF A+K+C
Sbjct: 90 AVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCG 149
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK--------------------- 126
+L + + ++ + G +D V +++++++V+CG
Sbjct: 150 ALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNS 209
Query: 127 ----------MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++ A+ F+ M +D+V W+ M++ L +G+ REA+D M+ +G+ D
Sbjct: 210 MLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLD 269
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ ACA L R+G +H IR +D V ++LV++YAK G A VF
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFN 329
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
++ N V W LI+GF Q+G ++EL +M++ D +L + + C L L
Sbjct: 330 SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL 389
Query: 297 GKSIHGYTVRRFDFN-LVLGTSVIDMYSKC------------------------------ 325
G+ +H ++ +V+ S+I MY+KC
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQ 449
Query: 326 -GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFAS 383
G + AR FD M ++++I+WN ++ +Y HG E+ L ++ M+ E V+PD T+ +
Sbjct: 450 VGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVT 509
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
L + G + G V I T A ++ + ++ G + EA K+ D ++ +
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLILDTSVANA-VITMYSKCGRILEARKVFDFLNVK 568
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+ W A+++G H ++ +LK PD + A++S
Sbjct: 569 D-IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 184/379 (48%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + MLN YVK G++++A+ F +M +D+ W+++++G + Q +++++ M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 170 KEGIDADEVVMMGL-IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G + +++C LG+ L + G + D V +LVDM+ + G +
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 229 DLASH-------------------------------VFKNMSRINIVTWGALISGFAQNG 257
DLAS +F +M ++V+W ++S +Q+G
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGT 316
L+++++MQS G DS + S+L ACA++ L+ GK +H +R + + +
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVAS 309
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++++Y+KCG A+ +F+ + R+ ++W V+IA + HG E++ LF QM ++
Sbjct: 310 ALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTL 369
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+L+S + GR L + +IQ + ++ + A+ ++ A I
Sbjct: 370 DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAESI 428
Query: 437 VDSMSTEPGLAVWVALLSG 455
M+ E + W ++++
Sbjct: 429 FRFMN-EKDIVSWTSMITA 446
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 185/401 (46%), Gaps = 36/401 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY A+ +F L R + +I + + E + L+NQM E + D
Sbjct: 311 LVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLD 370
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ C S MDL +G ++ ++ G V V +S++++Y KC + A F
Sbjct: 371 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFR 430
Query: 136 KMQRKDLVCWSSMI----------------------NGLVFN---------GQPREAVDA 164
M KD+V W+SMI N + +N G + +
Sbjct: 431 FMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRM 490
Query: 165 YKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y M E + D V + L + CADLG ++ G + G +++ L LD V +++ MY+
Sbjct: 491 YNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYS 550
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G + A VF ++ +IV+W A+I+G++Q+G+ +E+ ++ G +PD +S V+
Sbjct: 551 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 610
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR 341
L C+ G ++ GKS R + + L + ++D+ + G + A+ L D+M +
Sbjct: 611 VLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMK 670
Query: 342 DLIS-WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
W ++++ IHG+ E A L + + + PD ++
Sbjct: 671 PTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSY 710
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I+ ARK+F+ L ++ + ++N++I YS+ + + +++ ++K +PD
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 604
Query: 76 SSTFTVALKACVSLMDLKMGE---EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
++ L C ++ G+ ++ ++ + G + F S M++L + G + EA
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF--SCMVDLLGRAGHLTEAKD 662
Query: 133 AFEKMQRKDLV-CWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADL 190
++M K W ++++ +G A A K + + + D+ ++M I A A
Sbjct: 663 LIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 722
Query: 191 GD 192
D
Sbjct: 723 SD 724
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 301/554 (54%), Gaps = 5/554 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +F+++ ++ + +N++I AY ++ L +Y QM + PD
Sbjct: 297 LLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPD 356
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T T L +C + G I + V+ ++V + S++L +Y KCG ++A F
Sbjct: 357 SLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFN 416
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ +D+V W SMI+G N + EA++ Y M G D +M ++ AC L +
Sbjct: 417 TIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNL 476
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G ++HG +I+ L DV V +SLVDMY+K ++ +VF +M N+V W ++IS + +
Sbjct: 477 GCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCR 536
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NGL ++ L +M G PDSVS+ S L++ + + L+ GK++HGY +R R +L L
Sbjct: 537 NGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQL 596
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY KCG A+ +F M +L++WN++IA G HG +A+SLF +M +
Sbjct: 597 ENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGI 656
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF SLL++ +H G +EEG F LM ++ I+P +HY +VDLL RAG +++A
Sbjct: 657 APDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAY 716
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
V ++ EP ++W++LL C H +G+ A K+L + P + + N + +
Sbjct: 717 AFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENE 776
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ A +R +M++ G+KK PG S +EV + F D S + +I +L L MR
Sbjct: 777 LQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMR 836
Query: 555 AISSWLQGHMEEHE 568
GH E E
Sbjct: 837 KKG----GHYESVE 846
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 254/479 (53%), Gaps = 10/479 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I +Y + A +LF+EL +G V +N +I + L +Y E+V+
Sbjct: 195 LIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKL 254
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S++FT L AC + G ++ V+LG+ ND +V +S+L +Y KC + +A F
Sbjct: 255 VSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVF 314
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ K W++MI+ V NG+ + + YK+MK I D + ++ +C +G
Sbjct: 315 DQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYD 374
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +H ++R + +V +Q++L+ MY+K G+ D A+ +F + ++V WG++ISGF
Sbjct: 375 FGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFC 434
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN LE M G +PDS + S + AC + + LG +IHG ++ + ++
Sbjct: 435 QNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVF 494
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +S++DMYSK P + +F M ++L++WN II+ Y +G + ++SLF QM +
Sbjct: 495 VASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYG 554
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ PD + S+L ++S ++ +G+ ++ + +I + ++D+ + G ++ A
Sbjct: 555 LFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQ-RIPSDLQLENALIDMYIKCGFLKYA 613
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
I +M + L W +++GC +H K S+ +++ + + PDD+ +L+++
Sbjct: 614 QHIFQNM-LQTNLVTWNIMIAGCGSHGDWLKAMSLFDEM--RSFGIAPDDITFISLLTS 669
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 199/392 (50%), Gaps = 13/392 (3%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
T+ LKAC L +L+ G+ I + G+ +D ++ +S++N Y KCG A+ F+K
Sbjct: 51 TYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDK 110
Query: 137 MQR-----KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ +D+ W+S++NG G +E + + RM+ G+ D + L+ A G
Sbjct: 111 LPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD--G 168
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALI 250
+ +HGYS+R+ D +++ L+ MY G A +FK + + N+V W +I
Sbjct: 169 HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMI 228
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
GF +NGL ++LE+ + ++ + S S S L AC Q F+ G +H V+ F+
Sbjct: 229 GGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFE 288
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ + TS++ MYSKC + A +FDQ+ + WN +I++Y +G + L ++ QM
Sbjct: 289 NDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQM 348
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ PD T ++LS+ G + GR +V K IQ + ++ + ++ G
Sbjct: 349 KVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELV-KRPIQSNVALQSALLTMYSKCGN 407
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG-CHNHK 460
++A I +++ +A W +++SG C N K
Sbjct: 408 SDDANSIFNTIKGRDVVA-WGSMISGFCQNRK 438
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 9/381 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELP---LRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKE 70
+I Y +A K+F++LP + G D +NSI+ Y R E + + +M
Sbjct: 91 LINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLF 150
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
VRPD+ + + L A S L ++I +V + D F+ S ++ +Y CG+ +A
Sbjct: 151 GVRPDAYSLCILLGA--SDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDA 208
Query: 131 MVAFEKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
F++++ K ++V W+ MI G NG +++ Y K E + + AC
Sbjct: 209 WRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQ 268
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
FG+ VH ++ D V TSL+ MY+K ++ A +VF +S W A+
Sbjct: 269 GEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAM 328
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
IS + NG + L++ +M+ PDS++ + L +C +G G+ IH V+R
Sbjct: 329 ISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPI 388
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N+ L ++++ MYSKCG A ++F+ ++ RD+++W +I+ + + EAL +
Sbjct: 389 QSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNS 448
Query: 369 MIETMVKPDHSTFASLLSALS 389
M KPD AS++SA +
Sbjct: 449 MTVYGEKPDSDIMASVVSACT 469
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 169/345 (48%), Gaps = 20/345 (5%)
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNLDVKVQ 215
Q + VDA + + ++A L++AC L + ++G ++H I + D +
Sbjct: 29 QQGQYVDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYIT 88
Query: 216 TSLVDMYAKTGHLDLASHVFKNM-----SRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
TSL++ Y K G A VF + S ++ W ++++G+ + G + MQ
Sbjct: 89 TSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQ 148
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G PD+ SL +L A G L K IHGY+VR+ F + L + +I MY CG P
Sbjct: 149 LFGVRPDAYSL--CILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPL 206
Query: 330 CARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A LF +++ + ++++WNV+I +G +G E +L ++L VK ++F S LSA
Sbjct: 207 DAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSAC 266
Query: 389 SHSGLVEEG-RYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPG 445
V G + DL+ ++ P Y C ++ + ++ VE+A + D +S +
Sbjct: 267 CQGEFVSFGMQVHCDLVKLGFENDP----YVCTSLLTMYSKCKLVEDAENVFDQVSVKK- 321
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAK--KVLKLNPDDLGIHALVSN 488
+W A++S + + G K+ K KVL++ PD L ++S+
Sbjct: 322 TELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSS 366
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 300/561 (53%), Gaps = 2/561 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ +P R ++++++ Y+ ++ E L+ M++E
Sbjct: 159 LLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEK 218
Query: 76 SSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S A+ + VS+ + L MGE++ V+ G + V V +S++ +Y K G M A F
Sbjct: 219 SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF 278
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E + ++ + WS+MI G NG+ AV + +M G E +G++ A +DLG
Sbjct: 279 ESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALA 338
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G HG ++ + + V+++LVDMYAK G + A F + ++IV W A++SG
Sbjct: 339 VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHV 398
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG L L M G P ++ S L ACA I L+ GK +H V+
Sbjct: 399 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G+++ MYSKCG ++F ++ RD+I+WN II+ + +G G AL LF +M
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ TF ++L A SH GLV+ G +F LM Y + P HYACMVD+L+RAG ++EA
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++S++ + G +W +L C + + F +G +++++L D + L+SN +A +
Sbjct: 579 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQ 638
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+KW +V VR MR G+ K PG S VE+N +H F++ ++ H + E+I L++L M
Sbjct: 639 RKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHM 698
Query: 554 RAISSWLQGHMEEHEEHDPLS 574
+ + EE PL+
Sbjct: 699 KDEGYHSSSKLSFDEELGPLA 719
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 233/462 (50%), Gaps = 11/462 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGG--KNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESP 57
+K+ +++ +I Y + + +A +F+++P R V ++NS++ S P
Sbjct: 39 LKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLNPLS-GHRP 97
Query: 58 FEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG-NDVFVGS 115
+ L + M+ V P +F A A G A ++ ++V+V +
Sbjct: 98 LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCT 157
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GID 174
S+LN+Y K G +++A F+ M +++ WS+M+ G EA D ++ M +E +
Sbjct: 158 SLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSE 217
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
E V ++ A + G +HG ++ L V V+ SLV MYAK G + A HV
Sbjct: 218 KSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHV 277
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F++ N +TW A+I+G+AQNG A S + + +M + GF P + V L A + +G L
Sbjct: 278 FESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGAL 337
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+GK HG V+ F+ + + ++++DMY+KCG + A+ FDQ+ D++ W +++ +
Sbjct: 338 AVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGH 397
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G EEAL+L+ +M + + P ST AS L A + +E G+ +V KY +
Sbjct: 398 VQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIV-KYGLGLG 456
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + + ++ G +E+ + + + +A W +++SG
Sbjct: 457 APVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA-WNSIISG 497
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 170/329 (51%), Gaps = 2/329 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + + ++ +Y + +A +FE R T++++I Y++
Sbjct: 246 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 305
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +++QM P TF L A L L +G++ V+LG+ ++V S+++++
Sbjct: 306 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 365
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A F+++ D+V W++M++G V NG+ EA+ Y RM KEGI + +
Sbjct: 366 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 425
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ACA + G +H ++ L L V ++L MY+K G+L+ VF+ +
Sbjct: 426 ASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 485
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W ++ISGF+QNG L+L EM+ G PD+++ ++ L AC+ +G + G
Sbjct: 486 RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEY 545
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGV 327
+ + L ++D+ S+ G+
Sbjct: 546 FSLMTKDYGLTPRLDHYACMVDILSRAGM 574
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 11/270 (4%)
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH--VFKNMSRI--NIVTWGAL 249
R G ++H ++++ V SL++ Y+ LA+ VF ++ ++ +W +L
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
++ + + + + S P S +A A A+ G + H +
Sbjct: 89 LNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 310 F--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+ + TS+++MY K G+ S AR +FD M R+ SW+ ++A Y EEA LF
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 368 QMIETMVKPDHSTF--ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
M+E + S F ++LSA+S + G L+V + + +V + A
Sbjct: 209 LMLEE-CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENS-LVTMYA 266
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+AG + A + +S S E W A+++G
Sbjct: 267 KAGCMGAAFHVFES-SRERNSITWSAMITG 295
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 294/545 (53%), Gaps = 10/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + LFE + + + ++ SII +++ + L ++ +MI E V P
Sbjct: 189 LVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHP 248
Query: 75 DSSTFTVALKAC-VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+ F +AC V + L+ GE+I +V+ + + G S+ ++Y +C +++ A
Sbjct: 249 NEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKV 308
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +++ DLV W+S+IN G EA+ + M+ G+ D + +M L+ AC
Sbjct: 309 FYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDAL 368
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G S+H Y ++ L DV V SL+ MYA+ A VF ++VTW ++++
Sbjct: 369 HQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTAC 428
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
Q+ +L + D +SL + L A A++G+ ++ K +H Y F LV
Sbjct: 429 VQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYA---FKVGLV 485
Query: 314 ----LGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQ 368
L +ID Y+KCG A LF+ M + RD+ SW+ +I Y G+ +EAL LF +
Sbjct: 486 GDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFAR 545
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M VKP+H TF +L+A S GLV+EG Y++ +M +Y I PT +H +C++DLLARAG
Sbjct: 546 MRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAG 605
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+ EA K VD M EP + +W LL+ H +G++ A+ VL ++P + L+ N
Sbjct: 606 RLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCN 665
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+A W E A ++K MR SG++K PG S +++ GEL FI+ED+SH + ++I +L+
Sbjct: 666 IYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLEV 725
Query: 549 LYLEM 553
+ LEM
Sbjct: 726 IGLEM 730
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 235/453 (51%), Gaps = 24/453 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG SAR +F+ + R ++ ++I A+++ + +GL++ M++ PD
Sbjct: 88 LITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPD 147
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
A+ AC L DL +G ++ +A++ G+D+ V ++++ +Y K G + + FE
Sbjct: 148 QFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFE 207
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDS- 193
+++ KDL+ W S+I GL G+ +A+ ++ M EG+ +E + +AC+ + +S
Sbjct: 208 RIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSL 267
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+G +HG S++ L+ + SL DMYA+ LD A VF + ++V+W +LI+ F
Sbjct: 268 EYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAF 327
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+ GL + L EM+ G PD +++++ L AC L G+SIH Y V+ ++
Sbjct: 328 SAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDV 387
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ S++ MY++C S A +F + RD+++WN I+ + H H E+ LF + +
Sbjct: 388 IVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRS 447
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGR----YWF------DLMVSKYKIQPTEKHYACMVD 422
M D + ++LSA + G E + Y F D M+S ++D
Sbjct: 448 MPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSN-----------GLID 496
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A+ G +++A K+ + M T + W +L+ G
Sbjct: 497 TYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVG 529
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 192/383 (50%), Gaps = 10/383 (2%)
Query: 86 CVSLMDLKMGEEIWR-----KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
C L L G + R A + ++ + + ++ +Y +CG + A V F+ M +
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
+ V W+++I N + +A+ + M + G D+ + I AC++LGD G VH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+I+ D+ VQ +LV MY+K+G + +F+ + ++++WG++I+G AQ G
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231
Query: 261 STLELLMEMQSCGF-EPDSVSLVSALLACA-QIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
L++ EM + G P+ S AC+ + L+ G+ IHG +V+ + D N G S
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCS 291
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ DMY++C AR +F +++S DL+SWN +I ++ G EA+ LF +M ++ ++PD
Sbjct: 292 LSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPD 351
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T +LL A + +GR +V K + ++ + AR + A+ +
Sbjct: 352 GITVMALLCACVGYDALHQGRSIHSYLV-KLGLGGDVIVSNSLLSMYARCLDFSSAMDVF 410
Query: 438 DSMSTEPGLAVWVALLSGCHNHK 460
+ + + W ++L+ C H+
Sbjct: 411 HE-THDRDVVTWNSILTACVQHQ 432
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 281/513 (54%), Gaps = 34/513 (6%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ S F+ L++C+S L +G+++ + G +D F+ + +LNLY KCG+++ A+ F
Sbjct: 51 EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110
Query: 135 EKMQRKDLV-------------------------------CWSSMINGLVFNGQPREAVD 163
M RK+++ W++M+ GL+ E +
Sbjct: 111 GVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLG 170
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ RM + G DE + +++ CA L G VHGY + ++ V +SL MY
Sbjct: 171 LFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYM 230
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G L + + M N+V W LI+G AQNG L+ M+ GF PD ++ VS
Sbjct: 231 KCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVS 290
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR 341
+ +C+++ L G+ IH ++ +L++ +S+I MYS+CG + +F + ++
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKA-GASLIVSVISSLISMYSRCGCLEYSLKVFLECENG 349
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
D++ W+ +IA+YG HG G EA+ LF QM + ++ + TF SLL A SH GL E+G +F
Sbjct: 350 DVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFF 409
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
DLMV KY ++P +HY CMVDLL R G VEEA ++ SM + + W LLS C HKK
Sbjct: 410 DLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKK 469
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+ +++++V +L+P D + L+SN A +++W++V+ VRK MR +KK PG S +E
Sbjct: 470 TEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLE 529
Query: 522 VNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
V ++H F M DKSH + +I L++L EM+
Sbjct: 530 VKNQIHQFCMGDKSHPKSVEIASYLRELTSEMK 562
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 177/354 (50%), Gaps = 3/354 (0%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y D V+ARK+F+E+P R V T+N+++ + E E LGL+++M +
Sbjct: 120 SCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELG 179
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD L+ C L L G ++ + G+ ++ V SS+ ++Y+KCG + E
Sbjct: 180 FLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGE 239
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
M +++V W+++I G NG P E +D Y MK G D++ + +I +C++L
Sbjct: 240 RLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELA 299
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H I+ +L V V +SL+ MY++ G L+ + VF ++V W ++I+
Sbjct: 300 TLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIA 359
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
+ +G ++L +M+ E + V+ +S L AC+ G + G V ++
Sbjct: 360 AYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVK 419
Query: 312 LVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
L T ++D+ + G A AL M + D+I+W ++++ IH E A
Sbjct: 420 PRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA 473
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK S + + +I++Y + + K+F E V ++S+I AY E
Sbjct: 311 VIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEA 370
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLN 119
+ L+NQM +E + + TF L AC + G + + VE G + + M++
Sbjct: 371 IDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVD 430
Query: 120 LYVKCGKMNEAMVAFEKMQRK-DLVCWSSMINGL---------------VFNGQPREAV 162
L + G + EA M K D++ W ++++ VF PR+ V
Sbjct: 431 LLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPV 489
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 274/448 (61%), Gaps = 2/448 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D F+G ++++Y K G +A F++M KDLV W+S+++GL G ++A+ RM
Sbjct: 152 SDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRM 211
Query: 169 KKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ E G +EV ++ ++ ACAD+G G S+HG ++ ++ KV SL++MY K G
Sbjct: 212 RTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGF 271
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD AS +F+ M ++V+W +++ NG A ++L M+ G PD ++V+ L A
Sbjct: 272 LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA 331
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C G + +SIH Y R F+ ++++ T+++++Y+K G + + +F++++ RD I+W
Sbjct: 332 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAW 391
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
++A Y +H G EA+ LF M++ V+ DH TF LLSA SHSGLVEEG+ +F++M
Sbjct: 392 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 451
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
Y+++P HY+CMVDLL R+G +E+A +++ SM EP VW ALL C + +G+
Sbjct: 452 VYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 511
Query: 467 KVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGEL 526
+VA+++L L+P D + ++SN ++ W + + VR M++ + + PG S +E ++
Sbjct: 512 EVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKI 571
Query: 527 HAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
H F++ D+ H + ++I L++L ++R
Sbjct: 572 HRFVVGDQLHPRSDEIHTKLEELIRKIR 599
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 188/383 (49%), Gaps = 5/383 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR- 73
R++++Y A++LF+E+P + + ++NS++ S + L + +M E R
Sbjct: 159 RLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQ 218
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T + AC + L G+ + V+LG V +S++N+Y K G ++ A
Sbjct: 219 PNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 278
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE+M + LV W+SM+ NG + +D + MK+ GI+ D+ M+ L++AC D G
Sbjct: 279 FEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLG 338
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R S+H Y R N D+ + T+L+++YAK G L+ + +F+ + + + W A+++G+
Sbjct: 339 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 398
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY--TVRRFDFN 311
A + ++L M G E D V+ L AC+ G ++ GK V R +
Sbjct: 399 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 458
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMI 370
L + ++D+ + G A L M W ++ + ++G+ E + Q++
Sbjct: 459 LDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLL 518
Query: 371 ETMVKPDHSTFASLLSALSHSGL 393
++ DH + L + S +GL
Sbjct: 519 -SLDPSDHRNYIMLSNIYSAAGL 540
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K +S V +I +YG + +A +LFEE+P+R + ++NS+++ ++ +
Sbjct: 247 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 306
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+N M + + PD +T L+AC + E I G+ D+ + +++LNL
Sbjct: 307 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 366
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G++N + FE+++ +D + W++M+ G + REA+ + M KEG++ D V
Sbjct: 367 YAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 426
Query: 181 MGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
L+ AC+ + G F + Y + L+ + +VD+ ++G L+ A +
Sbjct: 427 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH----YSCMVDLLGRSGRLEDAYELI 482
Query: 236 KNMS-RINIVTWGALI 250
K+M + WGAL+
Sbjct: 483 KSMPMEPSSGVWGALL 498
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ L+ A + + ++H I+ D + LV MY K G+ + A +F M
Sbjct: 121 IVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLG 297
++V+W +L+SG + G G+ L M++ G +P+ V+L+S + ACA +G L G
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 298 KSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
KS+HG V+ + S+I+MY K G A LF++M R L+SWN ++ + +
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 300
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G+ E+ + LF M + PD +T +LL A + +GL + + +
Sbjct: 301 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES-IHAYIHRCGFNADIII 359
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+++L A+ G + + I + + +A W A+L+G
Sbjct: 360 ATALLNLYAKLGRLNASEDIFEEIKDRDRIA-WTAMLAG 397
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 308/565 (54%), Gaps = 15/565 (2%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A GN + + A G ND +L + + T+NS+I + + E + + +M
Sbjct: 425 AIGNGLINMYAKCGAINDACVVFRLMDN---KDSVTWNSMITGLDQNKQFLEAVKTFQEM 481
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ ++ P + T AL +C SL + +GE++ + ++LG DV V +++L LY +CG +
Sbjct: 482 RRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYV 541
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR--EAVDAYKRMKKEGIDADEVVMMGLIQ 185
E AF M D V W+S+I L + +P EAV+++ M + G D + V + ++
Sbjct: 542 KECQKAFSLMLDYDHVSWNSLIGALA-DSEPSMLEAVESFLVMMRAGWDPNRVTFITILA 600
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIV 244
A + L G +H ++R++ D ++ +L+ Y K G + ++F MS R + V
Sbjct: 601 AVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEV 660
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W ++ISG+ N L ++++ M G D + + L ACA + L+ G +HG +
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
VR + ++V+G++++DMY+KCG A F+ M +R+L SWN +I+ Y HGHG ++L
Sbjct: 721 VRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSL 780
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF QM PDH TF +LSA SH+GLV EG FD M Y + P +H++CMVDL
Sbjct: 781 DLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDL 840
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLG 481
L R GE+ + ++ M +P + +W +L C N + ++G + A+ +L++ P +
Sbjct: 841 LGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAV 900
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L+SN +A KW++VA R MRK+ +KK G S V + +H F+ DKSH + +
Sbjct: 901 NYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDL 960
Query: 542 IVYVLKKLYLEMRAISSWLQGHMEE 566
I LK+L +MR L G++ E
Sbjct: 961 IYEKLKELNGKMR-----LAGYIPE 980
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 223/452 (49%), Gaps = 11/452 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ + I A+ +F+++ R V + N +II R++ E + L+ +M K+ V +
Sbjct: 325 LVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELN 383
Query: 76 SSTFTVALKACVSLMDL----KMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEA 130
+++ + L A L + G E+ + G N + +G+ ++N+Y KCG +N+A
Sbjct: 384 PNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDA 443
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
V F M KD V W+SMI GL N Q EAV ++ M++ + M+ + +CA L
Sbjct: 444 CVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASL 503
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G G +H ++ L+LDV V +L+ +Y + G++ F M + V+W +LI
Sbjct: 504 GWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLI 563
Query: 251 SGFAQNGLAG-STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
A + + +E + M G++P+ V+ ++ L A + + +LGK IH ++R
Sbjct: 564 GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNV 623
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFL 367
+ + +++ Y KCG +F +M R D +SWN +I+ Y + +A+ +
Sbjct: 624 AADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVW 683
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M++ + D TFA++LSA + +E G V + ++ + +VD+ A+
Sbjct: 684 FMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSV-RACLESDIVIGSALVDMYAKC 742
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
G ++ A + + M L W +++SG H
Sbjct: 743 GRIDYASRFFEMMPAR-NLYSWNSMISGYARH 773
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 197/400 (49%), Gaps = 22/400 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ S RK+F+E+PLR + +++ +I Y+R P E L+ +M+ + P+
Sbjct: 114 LINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPN 173
Query: 76 SSTFTVALKACVSLMD--LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC-GKMNEAMV 132
F ++AC + LK G +I + Y NDV + ++++Y G ++ A
Sbjct: 174 HYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARR 233
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE----GIDADEVVMMGLIQACA 188
AF+ + ++LV +SMI+ G A D + M+KE G+ +E LI A
Sbjct: 234 AFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATC 293
Query: 189 DLGDSRFGLSVHGYSIRR----HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
L +S GL + + R D+ V ++LV +AK G + A ++F+ MS N+V
Sbjct: 294 SLANS--GLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVV 351
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGK----S 299
+ LI G + +EL MEM+ S P+S ++ L A + L+ GK
Sbjct: 352 SLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMII--LTAFPEFHVLENGKRKGSE 409
Query: 300 IHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + +R + + +G +I+MY+KCG + A +F M ++D ++WN +I +
Sbjct: 410 VHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNK 469
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
EA+ F +M T + P + T S LS+ + G + G
Sbjct: 470 QFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 192/384 (50%), Gaps = 16/384 (4%)
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
K EE+ + + G+ ND+F+ ++++N+Y + G + F++M ++LV WS +I+G
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS--RFGLSVHGYSIRRHLNL 210
N P EA + +++M +G + +I+AC + G+ +FG+ +HG +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209
Query: 211 DVKVQTSLVDMYAKT-GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
DV L+ MY G +D A F ++ N+V+ ++IS + Q G A S ++ M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269
Query: 270 Q----SCGFEPDSV---SLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMY 322
Q G +P+ SL+SA + A G + L + + F +L +G++++ +
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+K G A+ +F +M R+++S N +I GEEA+ LF++M ++ V+ + +++
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSYM 388
Query: 383 SLLSALSHSGLVEEGRY----WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
+L+A ++E G+ ++ + ++++ A+ G + +A +
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448
Query: 439 SMSTEPGLAVWVALLSGCHNHKKF 462
M + + W ++++G +K+F
Sbjct: 449 LMDNKDSV-TWNSMITGLDQNKQF 471
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 303/548 (55%), Gaps = 20/548 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +++ Y N +V A + E + +N +I +Y R + L Y QM+K+ +
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD+ T+ LKAC GEE+ +LG+G +V S +LY G NEA
Sbjct: 198 RPDNFTYPSVLKAC--------GEEL-----DLGFGKEVH-ESINASLYASMGMWNEAFE 243
Query: 133 AFEKMQRKDL----VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
F M +D+ + W+++ G + G + A++ +M+K G D V ++ + AC+
Sbjct: 244 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACS 303
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
+GD++ G +H ++IR V+ +L+ MY++ L A +F+ M +++TW +
Sbjct: 304 HIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNS 363
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+ISG + LL EM G EP+ V++ S L CA++ L+ GK H Y RR
Sbjct: 364 IISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRRE 423
Query: 309 DF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
DF +L+L +++DMY++ G AR +FD + RD +++ +IA YG+ G G+ AL LF
Sbjct: 424 DFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLF 483
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M +KPDH T ++LSA SHSGLV +G+ F+ M S Y + P +H+ACM DL R
Sbjct: 484 EEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGR 543
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG + +A +I+ +M +P A+W L+ C H+ IGE A+K+L++ P++ G + L+
Sbjct: 544 AGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLI 603
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+N +A W ++A VR MR G++K PG + V+V F+++D S+ ++I +L
Sbjct: 604 ANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLL 663
Query: 547 KKLYLEMR 554
+ L + M+
Sbjct: 664 EGLTMVMK 671
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 201/423 (47%), Gaps = 26/423 (6%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P SS L +C + L G ++ + LG+ + ++ Y + +A
Sbjct: 100 VHPISSL----LSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAH 155
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
V E W+ +I+ V NG ++A+ AYK+M K+GI D +++AC +
Sbjct: 156 VITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEEL 215
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM----SRINIVTWG 247
D FG VH ++ +YA G + A +F +M +NI+ W
Sbjct: 216 DLGFGKEVH--------------ESINASLYASMGMWNEAFELFGSMWAEDIELNIIIWN 261
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+ G+ + G LELL +M+ CG DSV+L+ L AC+ IG KLGK IH + +R
Sbjct: 262 TIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRS 321
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
F + ++I MYS+C A LF M+++ LI+WN II+ EEA L
Sbjct: 322 CFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLL 381
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+M+ ++P++ T AS+L + ++ G+ + M + + + +VD+ AR
Sbjct: 382 REMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYAR 441
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV--LKLNPDDLGIHA 484
+G+V EA ++ D M E + ++++G + K+ +++ ++ PD + + A
Sbjct: 442 SGKVLEARRVFD-MLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIA 500
Query: 485 LVS 487
++S
Sbjct: 501 VLS 503
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 28/307 (9%)
Query: 162 VDAYK-----RMKKEGIDADEVV--MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+DA+K R+ D +V + L+ +C D+ G +HG+ I +
Sbjct: 78 LDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 137
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
LV Y+ L A + +N + ++ W LIS + +NG L +M G
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARAL 334
PD+ + S L AC + L GK +H + +Y+ G+ + A L
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEVH-------------ESINASLYASMGMWNEAFEL 244
Query: 335 FDQMQSRD----LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
F M + D +I WN I Y G+ + AL L QM + D L A SH
Sbjct: 245 FGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSH 304
Query: 391 SGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
G + G+ + S + T K+ ++ + +R +++ A + M + L W
Sbjct: 305 IGDAKLGKEIHSFAIRSCFGEVDTVKN--ALITMYSRCKDLKHAYLLFQLMEAK-SLITW 361
Query: 450 VALLSGC 456
+++SGC
Sbjct: 362 NSIISGC 368
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 301/534 (56%), Gaps = 12/534 (2%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+ + S++ E L LY M++ P++ TF LK+C L ++ +
Sbjct: 22 WNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHVI 81
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G D + SS++N Y KC + A F++M +C+++MI+G FN +P AV
Sbjct: 82 RTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNPT-ICYNAMISGYSFNSKPLHAVC 140
Query: 164 AYKRMKKE---GIDAD----EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
+++M++E G+D D V ++ L+ C+ G+ +HG +R D+ V
Sbjct: 141 LFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVAN 200
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
SLV MY K G ++LA VF M +++TW A+ISG+AQNG A LE+ EM+ G
Sbjct: 201 SLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSA 260
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
D+V+L+ + ACA +G +G+ + RR F N L ++++MY++CG + AR +F
Sbjct: 261 DAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVF 320
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D+ + ++SW II YGIHGHGE AL LF +M+E+ V+PD + F S+LSA SH+GL +
Sbjct: 321 DRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTD 380
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
G +F M KY +QP +HY+C+VDLL RAG +EEA+ ++ SM +P AVW ALL
Sbjct: 381 RGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALLGA 440
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C HK I E + V++L P ++G + L+SN + E V+ VR MR+ ++K P
Sbjct: 441 CKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRERKLRKDP 500
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYV---LKKLYLEMRAISSWLQGHMEE 566
GYS VE G+++ F D SH Q + I + L+ L E+ + QG EE
Sbjct: 501 GYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVKEVHPPNEKCQGRSEE 554
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 127/237 (53%), Gaps = 2/237 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ ARK+F+E+ +R + T+N++I Y++ VL +Y++M V D
Sbjct: 202 LVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSAD 261
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + AC +L +G E+ R+ G+G + F+ ++++N+Y +CG + A F+
Sbjct: 262 AVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVFD 321
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ K +V W+++I G +G A++ + M + + D+ V + ++ AC+ G +
Sbjct: 322 RSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTDR 381
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
GL R++ L + + +VD+ + G L+ A ++ K+M + + WGAL+
Sbjct: 382 GLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALL 438
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 296/571 (51%), Gaps = 33/571 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
I+++Y + +++F +P R ++N I Y+ S + + +Y M+K+ +
Sbjct: 77 ILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNL 136
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK----------- 123
+ TF+ L C + +G +I + ++ G+G+DVFVGS ++++Y K
Sbjct: 137 NRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYF 196
Query: 124 --------------------CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
CG + E+ F ++ +D + W+ MI GL+ NG REA+D
Sbjct: 197 DEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALD 256
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
++ M+ G D+ ++ AC L G +H Y IR +V V ++LVDMY+
Sbjct: 257 MFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYS 316
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K + A VFK M + N+++W A++ G+ QNG + +++ EMQ G EPD +L S
Sbjct: 317 KCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGS 376
Query: 284 ALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
+ +CA + L+ G H V + + ++I +Y KCG + LF +M RD
Sbjct: 377 VISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRD 436
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+SW ++A Y G E + LF +M+ +KPD TF +LSA S +GLVE+G +F+
Sbjct: 437 EVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFE 496
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M+ ++ I P H C++DLL RAG +EEA +++M P + W LLS C H
Sbjct: 497 SMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDM 556
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
IG+ A ++ L P + + L+S+ +A + KW++VA +R+ MR ++K PGYS ++
Sbjct: 557 EIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKY 616
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
G++H F +D+S I L+KL +M
Sbjct: 617 KGKVHVFSADDQSSPFLGQIYAELEKLNYKM 647
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 180/380 (47%), Gaps = 37/380 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
++F +++L++Y K G +++ F M +D V W+ I+G G +AV YK M
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129
Query: 170 KE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
K+ ++ + + ++ C+ G ++G ++ DV V + LVDMY K G +
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189
Query: 229 DLASHVFKNMSRINIV-------------------------------TWGALISGFAQNG 257
A F M N+V +W +I+G QNG
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L L++ EM+ GF D + S L AC + L GK IH Y +R N+ +G+
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++DMYSKC A +F +M +++ISW ++ YG +G EEA+ +F +M V+P
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369
Query: 377 DHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
D T S++S+ ++ +EEG ++ +VS T + ++ L + G E + +
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN--ALITLYGKCGSTENSHR 427
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+ M+ ++ W ALL+G
Sbjct: 428 LFTEMNIRDEVS-WTALLAG 446
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 292 GFLKLGKSIHGYTVRRFDF----NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ KLG + + V FD NL +++ +YSK G+ S + +F+ M RD +SWN
Sbjct: 49 AYYKLGNLAYAHHV--FDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWN 106
Query: 348 VIIASYGIHGHGEEALSLF-LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+ I+ Y +G +A+ ++ L + + + + TF+++L S V+ GR + +
Sbjct: 107 LAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQ-INGQIL 165
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
K+ + +VD+ + G + +A + D M
Sbjct: 166 KFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 298/537 (55%), Gaps = 13/537 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+LY A K+FEE+P R + ++NS+I Y E F L L+ +M+K +PD
Sbjct: 167 LISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPD 226
Query: 76 SSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ AL AC + MG+E+ R +E G DV V +S+L++Y K G+++ A
Sbjct: 227 RFSTMSALGACSHVYSPNMGKELHCHAVRSRIETG---DVMVMTSILDMYSKYGEVSYAE 283
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
F+ + ++++V W+ +I N + +A +++M ++ G+ D + ++ L+ ACA L
Sbjct: 284 RIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL 343
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G ++HGY++RR + + T+L+DMY + G L A +F ++ N+++W ++I
Sbjct: 344 E----GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSII 399
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
+ + QNG S LEL ++ PDS ++ S L A A+ L G+ IH Y V+ R+
Sbjct: 400 AAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYG 459
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N ++ S++ MY+ CG AR F+ + +D++SWN II +Y +HG G ++ LF +M
Sbjct: 460 SNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEM 519
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
I + V P+ STFASLL+A S SG+V+EG +F+ M +Y I P +HY M+DL+ R G
Sbjct: 520 IASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGN 579
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
A + + M P +W +LL+ NH ++ E A+++ K+ D+ G + L+ N
Sbjct: 580 FSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNM 639
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+A ++WE+V ++ M G+ + S VE + H D+SH + I VL
Sbjct: 640 YAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVL 696
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 227/413 (54%), Gaps = 8/413 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+E+ +N +I ++ FE L LY +M+ V+ DS T+ +K+
Sbjct: 79 ALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTG 138
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L+ G++I ++L + +DV+V +S+++LY+K G +A FE+M +D+V W+SM
Sbjct: 139 ISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSM 198
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G + ++ +K M K G D M + AC+ + G +H +++R +
Sbjct: 199 ISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRI 258
Query: 209 NL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
DV V TS++DMY+K G + A +FK + + NIV W LI +A+N
Sbjct: 259 ETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQ 318
Query: 268 EM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+M + G +PD ++L++ L ACA + G++IHGY +RR F ++VL T++IDMY +
Sbjct: 319 KMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIVLDTALIDMYGEW 374
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +FD++ ++LISWN IIA+Y +G AL LF ++ ++ + PD +T AS+L
Sbjct: 375 GQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASIL 434
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
A + S + EGR +V K + +V + A G++E+A K +
Sbjct: 435 PAYAESLSLSEGRQIHAYIV-KSRYGSNTIILNSLVHMYAMCGDLEDARKCFN 486
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 18/358 (5%)
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
+ G M +A+ F++M + D W+ MI G G EA+ Y RM G+ AD
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+I++ + G +H I+ DV V SL+ +Y K G A VF+ M
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV+W ++ISG+ +L L EM GF+PD S +SAL AC+ + +GK +
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249
Query: 301 HGYTVR-RFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H + VR R + ++++ TS++DMYSK G S A +F + R++++WNV+I Y +
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309
Query: 359 GEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ----PT 413
+A F +M E ++PD T +LL A + + EGR + Y ++ P
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGR-----TIHGYAMRRGFLPH 360
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKFSIGEKVAK 470
++D+ G+++ A I D ++ E L W ++++ N K +S E K
Sbjct: 361 IVLDTALIDMYGEWGQLKSAEVIFDRIA-EKNLISWNSIIAAYVQNGKNYSALELFQK 417
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 36/256 (14%)
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ---------------SCGF----- 274
+K ++N + GFA +GL L+L EM SCG
Sbjct: 52 YKVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEAL 111
Query: 275 -----------EPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
+ DS + + + I L+ GK IH ++ RF ++ + S+I +Y
Sbjct: 112 QLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLY 171
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
K G A +F++M RD++SWN +I+ Y G +L LF +M++ KPD +
Sbjct: 172 MKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTM 231
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIVDSMS 441
S L A SH G+ + +I+ + ++D+ ++ GEV A +I +
Sbjct: 232 SALGACSHVYSPNMGKE-LHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCI- 289
Query: 442 TEPGLAVWVALLSGCH 457
+ + W L+ GC+
Sbjct: 290 IQRNIVAWNVLI-GCY 304
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 7 SAYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S YG++ + ++ +Y D+ ARK F + L+ V ++NSII+AY+ + L
Sbjct: 456 SRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCL 515
Query: 64 YNQMIKEDVRPDSSTFTVALKAC 86
+++MI V P+ STF L AC
Sbjct: 516 FSEMIASKVDPNKSTFASLLAAC 538
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 293/531 (55%), Gaps = 11/531 (2%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI AR++F+ + R + T+NS+I + E + +Y MI +V PD T + K
Sbjct: 114 DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFK 173
Query: 85 ACVSLMDLKMGEEIWRK---AVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
A DL + +E R AV LG ++VFVGS+++++YVK GK EA + ++++ K
Sbjct: 174 A---FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D+V +++I G G+ EAV A++ M E + +E ++ +C +L D G +H
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G ++ + QTSL+ MY + +D + VFK + N V+W +LISG QNG
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L +M +P+S +L SAL C+ + + G+ IHG + FD + G+ +I
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLI 410
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
D+Y KCG AR +FD + D+IS N +I SY +G G EAL LF +MI ++P+
Sbjct: 411 DLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T S+L A ++S LVEEG FD K KI T HYACMVDLL RAG +EEA +++ +
Sbjct: 471 TVLSVLLACNNSRLVEEGCELFD-SFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTT 528
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
P L +W LLS C H+K + E++ +K+L++ P D G L+SN +A KW V
Sbjct: 529 EVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK-SHNQYEDIVYVLKKL 549
++ M+ +KK P S VE+N E H F+ D SH E I+ L++L
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 203/420 (48%), Gaps = 9/420 (2%)
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
I D + F+ L+ C+ + + I ++ G+ ++ GS +++ +KCG +
Sbjct: 57 ITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDI 115
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+ A F+ M + +V W+S+I L+ + + +EAV+ Y+ M + DE + + +A
Sbjct: 116 DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAF 175
Query: 188 ADLGDSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+DL + HG ++ L + +V V ++LVDMY K G A V + ++V
Sbjct: 176 SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 235
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
ALI G++Q G ++ M +P+ + S L++C + + GK IHG V+
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F+ L TS++ MY +C + + +F ++ + +SW +I+ +G E AL
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M+ +KP+ T +S L S+ + EEGR + V+KY + + ++DL
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI-VTKYGFDRDKYAGSGLIDLYG 414
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN---HKKFSIGEKVAKKVLKLNPDDLGI 482
+ G + A + D++S +++ + S N + + E++ L L P+D+ +
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN--LGLQPNDVTV 472
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 292/536 (54%), Gaps = 8/536 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL----YNQMIKEDVRPDSSTF 79
ND+ K+F+E+PL+ V ++N++I F ++ L + QM+ E + P+ T
Sbjct: 125 NDVC---KMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITL 181
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
L+A + L D+ + ++ ++ G+ ++ FVGS++++ Y K G ++EA AF+++
Sbjct: 182 NGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSS 241
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+DLV W+ M++ NG +A +K M+ EG+ D +I +C LG G V
Sbjct: 242 RDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQV 301
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG IR +LDV V ++LVDMY+K +++ A F M NIV+W + G+ Q+G
Sbjct: 302 HGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDG 361
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
+ LL EM PD ++L S L +C + +H Y V F+ L + ++
Sbjct: 362 KEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANAL 421
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+ YSKCG A F + D+ISW ++ +Y HG ++ + +F +++ + V+PD
Sbjct: 422 VSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDK 481
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
F +LSA +H G V EG ++F+LM++ Y+I P +HY ++DLL RAG ++EA+ ++
Sbjct: 482 VAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLT 541
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
SM EP A L C ++ + ++K+ + P++ G ++L+SN +A W +
Sbjct: 542 SMPVEPRSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFD 601
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
VA VRK MR+ KVPG S +E GE+H F+ DK+H + + +L L M+
Sbjct: 602 VARVRKLMRERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLVRLMK 657
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 211/418 (50%), Gaps = 19/418 (4%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
ALK L L G+++ ++LG N + + + +L++YVKC + N+ F++M K+
Sbjct: 79 ALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKN 138
Query: 142 LVCWSSMINGLVFNGQPREAV-----DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+V W+++I G+V G + A+ +++M E + + + + GL++A +L D
Sbjct: 139 VVSWNTLICGVV-EGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+H + ++ + + V ++LVD YAK G +D A F +S ++V W ++S +A N
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALN 257
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLG 315
G+ G + M+ G + D + S + +C +G LGK +HG +R FD ++++
Sbjct: 258 GVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA 317
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++++DMYSK AR FD M ++++SW + YG HG G+E + L +MI
Sbjct: 318 SALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTY 377
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL----ARAGEVE 431
PD AS+LS+ + E + V Y ++ + + + + L ++ G +
Sbjct: 378 PDELALASILSSCGNLSATSE-----VVQVHAYVVENGFEAFLSIANALVSAYSKCGSIG 432
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
A + S++ EP + W +L+ H G V +K+L N PD + ++S
Sbjct: 433 SAFQSFSSVA-EPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLS 489
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 290/548 (52%), Gaps = 34/548 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +FE + +N++I ++ P L LY M+ + P+S TF LK+C
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC------------------------ 124
G++I + ++LG+ D++V +S++++YV+
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 125 -------GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
G + A F+++ KD+V W++MI+G G +EA++ ++ M K + DE
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ ++ ACA G G VH + + ++K+ +L+D+Y+K G ++ A +F+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+S ++++W LI G+ L L L EM G P+ V+++S L ACA +G + +G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 298 KSIHGYTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+ IH Y +R L TS+IDMY+KCG A +F+ M + L SWN +I +
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG + + LF +M + ++PD TF LLSA SHSG+++ GR+ F M YK+ P
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKL 436
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY CM+DLL +G +EA +++++M EP +W +LL C H + E A+ ++K
Sbjct: 437 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK 496
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+ P++ + L+SN +A +WE+VA +R + MKKVPG S +EV+ + F++ DK
Sbjct: 497 IEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDK 556
Query: 535 SHNQYEDI 542
H Q +I
Sbjct: 557 FHPQNREI 564
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 208/378 (55%), Gaps = 7/378 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + DI SA+KLF+E+P++ V ++N++I Y+ E L L+ +M+K +VRPD
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST+ L AC +++G ++ + G+ +++ + +++++LY KCG++ A F+
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD++ W+++I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315
Query: 196 GLSVHGYSIRRHLNLD--VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y +R + ++TSL+DMYAK G ++ A VF +M ++ +W A+I GF
Sbjct: 316 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 375
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
A +G A ++ +L M+ G EPD ++ V L AC+ G L LG+ I + +
Sbjct: 376 AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPK 435
Query: 314 LG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
L +ID+ G+ A + + M+ D + W ++ + +HG+ E A S +I
Sbjct: 436 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLI 495
Query: 371 ETMVKPDHSTFASLLSAL 388
+ ++P++ + LLS +
Sbjct: 496 K--IEPENPSSYILLSNI 511
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 218 LVDMYAKTGHLD---LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
L+++ + H D A+ VF+ + N + W +I G A + S+L L + M S G
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGL 60
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM------------ 321
P+S + L +CA+ G+ IHG ++ FD +L + TS+I M
Sbjct: 61 LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120
Query: 322 -------------------YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
Y+ G A+ LFD++ +D++SWN +I+ Y G +EA
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---WFDLMVSKYKIQPTEKHYAC 419
L LF +M++ V+PD ST+ ++LSA +HSG +E GR W D + K
Sbjct: 181 LELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVD----DHGFDSNLKIVNA 236
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++DL ++ GEVE A + +S + ++ W L+ G
Sbjct: 237 LIDLYSKCGEVETACGLFQGLSYKDVIS-WNTLIGG 271
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY ++ +A LF+ L + V ++N++I Y+ E L L+ +M++
Sbjct: 234 VNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 293
Query: 73 RPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
P+ T L AC L + +G ++ G N + +S++++Y KCG + A
Sbjct: 294 TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 353
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M K L W++MI G +G+ + D + RM+K GI+ D++ +GL+ AC
Sbjct: 354 HQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSAC--- 410
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT----- 245
+ +G LDL H+F++M++ +T
Sbjct: 411 --------------------------------SHSGMLDLGRHIFRSMTQDYKMTPKLEH 438
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+G +I +GL E++ M+ EPD V S L AC G ++L +S
Sbjct: 439 YGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNVELAESF 490
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 294/536 (54%), Gaps = 5/536 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+++A KLF +P + + ++ +++ Y + E + L+ M K ++PD + L +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C SL L G ++ ++ GND +V +S++++Y KC + +A F+ D+V +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 146 SSMINGLVFNG---QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
++MI G G + EA++ ++ M+ I + + L++A A L +HG
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ LNLD+ ++L+D+Y+ L + VF M ++V W ++ +G+ Q
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L L +E+Q PD + + + A + ++LG+ H ++R + N + +++DM
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG P A FD SRD++ WN +I+SY HG G++AL + +M+ ++P++ TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+LSA SH+GLVE+G F+LM+ ++ I+P +HY CMV LL RAG + +A ++++ M
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
T+P VW +LLSGC + E A+ + +P D G ++SN +A + W E
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAIS 557
VR+ M+ G+ K PG S + +N E+H F+ +DKSH + I VL L +++R +S
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGVS 834
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 230/451 (50%), Gaps = 17/451 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM--IKEDVR 73
+I LY +V ARK+FE++P R + ++++++ A + E L ++ + ++D
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-S 143
Query: 74 PDSSTFTVALKACVSL--MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
P+ + ++AC L M ++ V+ G+ DV+VG+ +++ Y+K G ++ A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F+ + K V W++MI+G V G+ ++ + ++ ++ + D ++ ++ AC+ L
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H + +R L +D + L+D Y K G + A +F M NI++W L+S
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G+ QN L +EL M G +PD + S L +CA + L G +H YT++
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY---GIHGHGEEALSLFL 367
+ + S+IDMY+KC + AR +FD + D++ +N +I Y G EAL++F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 368 QMIETMVKPDHSTFASLLSA---LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
M +++P TF SLL A L+ GL ++ ++ KY + + ++D+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----IHGLMFKYGLNLDIFAGSALIDVY 499
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++++ + D M + L +W ++ +G
Sbjct: 500 SNCYCLKDSRLVFDEMKVKD-LVIWNSMFAG 529
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 183/373 (49%), Gaps = 19/373 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV- 60
IK NL +I +Y + + ARK+F+ V +N++I YSR + +E+
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 61 --LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L ++ M +RP TF L+A SL L + ++I + G D+F GS+++
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y C + ++ + F++M+ KDLV W+SM G V + EA++ + ++ DE
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ A +L + G H ++R L + + +L+DMYAK G + A F +
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ ++V W ++IS +A +G L++L +M S G EP+ ++ V L AC+ G ++ G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG- 675
Query: 299 SIHGYTVRRFDFNLVLG--------TSVIDMYSKCGVPSCARALFDQMQSRD-LISWNVI 349
+++F+ L G ++ + + G + AR L ++M ++ I W +
Sbjct: 676 ------LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 350 IASYGIHGHGEEA 362
++ G+ E A
Sbjct: 730 LSGCAKAGNVELA 742
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 174/337 (51%), Gaps = 13/337 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ + ++NLY + G M A FEKM ++LV WS+M++ +G E++ +
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 170 KEGIDA-DEVVMMGLIQACADL-GDSRFGL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+ D+ +E ++ IQAC+ L G R+ + + + ++ + DV V T L+D Y K G
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
++D A VF + + VTW +ISG + G + +L+L ++ PD L + L
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC+ + FL+ GK IH + +R + + L +ID Y KCG A LF+ M ++++IS
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +++ Y + +EA+ LF M + +KPD +S+L+ S + L G F V
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT--SCASLHALG---FGTQV 372
Query: 406 SKYKIQPT--EKHYAC--MVDLLARAGEVEEALKIVD 438
Y I+ Y ++D+ A+ + +A K+ D
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VHG I L LD + L+++Y++ G + A VF+ M N+V+W ++S +G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 259 AGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGK----SIHGYTVRR-FDFNL 312
+L + +E ++ P+ L S + AC+ G G+ + + V+ FD ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+GT +ID Y K G AR +FD + + ++W +I+ G +L LF Q++E
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD +++LSA S +E G+ + +Y ++ ++D + G V
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQ-IHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A K+ + M + + W LLSG
Sbjct: 303 AHKLFNGMPNK-NIISWTTLLSG 324
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 300 IHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG V + + L +I++YS+ G AR +F++M R+L+SW+ ++++ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 359 GEEALSLFLQMIETMV-KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EE+L +FL+ T P+ +S + A SGL GR W + + ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR-WMVFQLQSFLVKSGFDRD 182
Query: 418 ----ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
++D + G ++ A + D++ E W ++SGC
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L ++ +Y A K F+ R V +NS+I +Y+ +
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + +M+ E + P+ TF L AC ++ G + + + G + M++L
Sbjct: 641 LQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSL 700
Query: 121 YVKCGKMNEAMVAFEKMQRKD-LVCWSSMING 151
+ G++N+A EKM K + W S+++G
Sbjct: 701 LGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 294/539 (54%), Gaps = 2/539 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-D 71
V +I Y N + A LF+ +P R V ++++++ Y +V+ L MI E +
Sbjct: 69 VNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGN 128
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P+ +A+ +C ++ G + ++ G+ +V ++++++Y KC + +AM
Sbjct: 129 VSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAM 188
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ ++ D+V ++S+++ LV NG RE ++ + M E + D+V + CA L
Sbjct: 189 GVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLK 248
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D R GL VHG + + D V +++++MY K G +A VF + N+V W A+++
Sbjct: 249 DLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMA 308
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
QNG L L +M+ + + + L ACA + + G +HG++ + F
Sbjct: 309 SCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKH 368
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++++G ++I+MY+K G A+ +F M RD+I+WN +I + HG G++AL +F M+
Sbjct: 369 HVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDML 428
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
P++ TF +LSA H GLV+EG Y+ ++ ++ +QP +HY C+V LL++ G++
Sbjct: 429 AAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQL 488
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA + + + + W LL+ CH H+ + +G VA+ VL+++P+D+G + L+SN +
Sbjct: 489 NEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIY 548
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A E++W+ V VRK MR +KK PG S +E+ H F ED H Y +K+L
Sbjct: 549 AKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKEL 607
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 190/375 (50%), Gaps = 6/375 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT S + ++++Y + + A ++ E+P+ + YNSI+ + E
Sbjct: 159 LLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREG 218
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + M+ E V+ D TF A C SL DL++G + K + D +V S+++N+
Sbjct: 219 LEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINM 278
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCGK A F+ +Q +++V W++++ NG EA++ + +M++E + ++E
Sbjct: 279 YGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTY 338
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+ ACA L R G +HG+S + V V +L++MYAK+G ++ A VF +M
Sbjct: 339 AVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMH 398
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I+TW A+I GF+ +GL L + +M + P+ V+ L AC +G ++ G
Sbjct: 399 RDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYY 458
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIH- 356
+ +++F L T ++ + SK G + AR + D+++W ++ + +H
Sbjct: 459 LHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQ 518
Query: 357 --GHGEEALSLFLQM 369
G G L+M
Sbjct: 519 NYGLGRWVAEFVLEM 533
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 195/385 (50%), Gaps = 14/385 (3%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYG--NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
LK +LK+G+ I + N + +S++N Y K +++ A F++M +
Sbjct: 36 LKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPER 95
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSV 199
++V WS+++ G + NG + + K M EG + +E ++ I +C D G G
Sbjct: 96 NVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQC 155
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG ++ + V+ +LV MY+K + A V+ + +IV + +++S +NG
Sbjct: 156 HGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYL 215
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
LE+L M S + D V+ V+A CA + L+LG +HG + + + + +++
Sbjct: 216 REGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAI 275
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
I+MY KCG AR +FD +QSR+++ W ++AS +G EEAL+LF +M + VK +
Sbjct: 276 INMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNE 335
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA----CMVDLLARAGEVEEAL 434
T+A LL+A + G ++ + + KH+ ++++ A++G++E A
Sbjct: 336 FTYAVLLNACAGLSARRNGS-----LLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAK 390
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K+ M + W A++ G +H
Sbjct: 391 KVFSDM-MHRDIITWNAMICGFSHH 414
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 274 FEPDSVS------LVSALLACAQIGFLKLGKSIHGY---TVRRFDFNLVLGTSVIDMYSK 324
P++VS L+ L A LK+GK+IH + T R + +++ S+I+ Y+K
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFAS 383
S A LFD+M R+++SW+ ++ Y ++G + + L MI E V P+ A
Sbjct: 79 VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138
Query: 384 LLSALSHSGLVEEGRYWFDLMV 405
+S+ G VEEGR L++
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLL 160
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 296/528 (56%), Gaps = 1/528 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARKLF+ +P R ++ ++I Y+ + + + ++ M +E+ +
Sbjct: 159 LLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQN 218
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L A S + + G ++ A++ G V V ++++ +Y KCG +++A+ FE
Sbjct: 219 EFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFE 278
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ + WS+M+ G G +A+ + +M G+ E ++G+I AC+DL
Sbjct: 279 FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVE 338
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ + L + V +++VDMYAK G L A F+ + + ++V W ++I+G+ Q
Sbjct: 339 GKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQ 398
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG L L +MQ P+ +++ S L AC+ + L GK +H ++ F + +
Sbjct: 399 NGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPI 458
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+++ MY+KCG +F +M SRD+ISWN +I+ +GHG +AL LF +M+ +
Sbjct: 459 GSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGI 518
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF +LLSA SH GLV+ G +F +M ++ I P +HYACMVD+L+RAG++ EA
Sbjct: 519 KPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAK 578
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++S + + GL +W LL C NH+ + +G +K+++L + + L+S+ +
Sbjct: 579 EFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALG 638
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
E V VR+ M+ G+ K PG S +E+ G +H F++ D H Q ++I
Sbjct: 639 DRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEI 686
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 242/473 (51%), Gaps = 13/473 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFE---VLGLYNQMIK- 69
+ LY N + A LF+ + D ++NS+I A+S+ S + L+ +M++
Sbjct: 52 FLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRA 111
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+V P++ T A +L D+ G++ AV+ G DV+VGSS+LN+Y K G + +
Sbjct: 112 NNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFD 171
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F++M ++ V W++MI+G + +AV+ ++ M++E +E + ++ A
Sbjct: 172 ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTS 231
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G VH +I+ L V V +LV MYAK G LD A F+ N +TW A+
Sbjct: 232 DVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAM 291
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
++G+AQ G + L+L +M S G P +LV + AC+ + + GK +H + + F
Sbjct: 292 VTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF 351
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
L + ++V+DMY+KCG + AR F+ +Q D++ W II Y +G E L+L+ +
Sbjct: 352 GLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGK 411
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M V P+ T AS+L A S +++G+ ++ KY + + + + + G
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARII-KYGFKLEVPIGSALSAMYTKCG 470
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVLKLNP 477
+++ I M + ++ W A++SG H +K + EK+ + +K +P
Sbjct: 471 SLDDGYLIFWRMPSRDVIS-WNAMISGLSQNGHGNKALELFEKMLLEGIKPDP 522
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 187/391 (47%), Gaps = 13/391 (3%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P L C ++ G + + ++ G + ++V ++ LNLY K ++ A+
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 134 FEKM--QRKDLVCWSSMINGLVFNGQPRE---AVDAYKR-MKKEGIDADEVVMMGLIQAC 187
F+ + KD V W+S+IN N A+ ++R M+ + + + G+ A
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
++L D G H +++ + DV V +SL++MY KTG + A +F M N V+W
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWA 188
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+ISG+A + +A +E+ M+ + +L S L A F+ G+ +H ++
Sbjct: 189 TMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN 248
Query: 308 FDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+V + +++ MY+KCG A F+ ++ I+W+ ++ Y G ++AL LF
Sbjct: 249 GLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLF 308
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLL 424
+M + V P T +++A S V EG+ +K+ + Y + +VD+
Sbjct: 309 NKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSF---AFKLGFGLQLYVLSAVVDMY 365
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A+ G + +A K + + +P + +W ++++G
Sbjct: 366 AKCGSLADARKGFECVQ-QPDVVLWTSIITG 395
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 301/571 (52%), Gaps = 33/571 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-RP 74
+++ Y D+ + +++F +P R ++NS+I Y S E + YN M+K+ V
Sbjct: 77 MLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNL 136
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ TF+ L S + +G +I + V+ G+G VFVGSS++++Y K G ++ A F
Sbjct: 137 NRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVF 196
Query: 135 EK-------------------------------MQRKDLVCWSSMINGLVFNGQPREAVD 163
++ M+ +D + W++MI GL+ NG EA+D
Sbjct: 197 DEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMD 256
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
++ M++EG+ D+ ++ AC L + G +H IR N +V V ++LVDMY
Sbjct: 257 LFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYC 316
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K + A VFK M+ N+V+W A++ G+ QNG + + + +MQ G EPD +L S
Sbjct: 317 KCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGS 376
Query: 284 ALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
+ +CA + L+ G H V + + ++I +Y KCG + LFD+M RD
Sbjct: 377 VISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRD 436
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+SW +++ Y G E + LF +M+ +KPD TF ++LSA S +GLVE G+ +F+
Sbjct: 437 EVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFE 496
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M+ + I P HY CM+DL RAG +EEA ++ M P W LLS C +
Sbjct: 497 SMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNE 556
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
IG+ A+ +L+L+P + + L+S+ +A + KW VA +R+ MR+ G +K PG+S ++
Sbjct: 557 EIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKY 616
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+++ F +D+S + I L+KL +M
Sbjct: 617 KSKVYIFSADDQSSPFSDQIYAELEKLNHKM 647
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 222/466 (47%), Gaps = 53/466 (11%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +IK P++ + + A L ++ ++ K + + F ++ML+ Y
Sbjct: 27 LHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQ----PNSFSWNTMLSAYS 82
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG------IDAD 176
K G ++ F M +D V W+S+I+G V G EAV Y M K+G I
Sbjct: 83 KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++++ Q C DLG +HG ++ V V +SLVDMYAK G + +AS VF
Sbjct: 143 TMLLLVSSQGCVDLGRQ-----IHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFD 197
Query: 237 NMSRINIV-------------------------------TWGALISGFAQNGLAGSTLEL 265
+ N+V +W +I+G QNGL ++L
Sbjct: 198 EVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDL 257
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
+M+ G D + S L AC + LK GK IH +R ++ N+ +G++++DMY K
Sbjct: 258 FRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCK 317
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
C A A+F +M +++++SW ++ YG +G EEA+ +F M ++PD T S+
Sbjct: 318 CRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSV 377
Query: 385 LSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+S+ ++ +EEG ++ +VS T + ++ L + G +E++ ++ D MS
Sbjct: 378 ISSCANLASLEEGAQFHCQALVSGLISFITVSN--ALITLYGKCGSIEDSNQLFDEMSFR 435
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVS 487
++ W AL+SG K + + +++L L PD + A++S
Sbjct: 436 DEVS-WTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLS 480
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 274/448 (61%), Gaps = 2/448 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D F+G ++++Y K G +A F++M KDLV W+S+++GL G ++A+ RM
Sbjct: 95 SDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRM 154
Query: 169 KKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ E G +EV ++ ++ ACAD+G G S+HG ++ ++ KV SL++MY K G
Sbjct: 155 RTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGF 214
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD AS +F+ M ++V+W +++ NG A ++L M+ G PD ++V+ L A
Sbjct: 215 LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA 274
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C G + +SIH Y R F+ ++++ T+++++Y+K G + + +F++++ RD I+W
Sbjct: 275 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAW 334
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
++A Y +H G EA+ LF M++ V+ DH TF LLSA SHSGLVEEG+ +F++M
Sbjct: 335 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 394
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
Y+++P HY+CMVDLL R+G +E+A +++ SM EP VW ALL C + +G+
Sbjct: 395 VYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 454
Query: 467 KVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGEL 526
+VA+++L L+P D + ++SN ++ W + + VR M++ + + PG S +E ++
Sbjct: 455 EVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKI 514
Query: 527 HAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
H F++ D+ H + ++I L++L ++R
Sbjct: 515 HRFVVGDQLHPRSDEIHTKLEELIRKIR 542
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 188/383 (49%), Gaps = 5/383 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR- 73
R++++Y A++LF+E+P + + ++NS++ S + L + +M E R
Sbjct: 102 RLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQ 161
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T + AC + L G+ + V+LG V +S++N+Y K G ++ A
Sbjct: 162 PNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 221
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE+M + LV W+SM+ NG + +D + MK+ GI+ D+ M+ L++AC D G
Sbjct: 222 FEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLG 281
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R S+H Y R N D+ + T+L+++YAK G L+ + +F+ + + + W A+++G+
Sbjct: 282 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 341
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY--TVRRFDFN 311
A + ++L M G E D V+ L AC+ G ++ GK V R +
Sbjct: 342 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 401
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMI 370
L + ++D+ + G A L M W ++ + ++G+ E + Q++
Sbjct: 402 LDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLL 461
Query: 371 ETMVKPDHSTFASLLSALSHSGL 393
++ DH + L + S +GL
Sbjct: 462 -SLDPSDHRNYIMLSNIYSAAGL 483
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K +S V +I +YG + +A +LFEE+P+R + ++NS+++ ++ +
Sbjct: 190 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 249
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+N M + + PD +T L+AC + E I G+ D+ + +++LNL
Sbjct: 250 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 309
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G++N + FE+++ +D + W++M+ G + REA+ + M KEG++ D V
Sbjct: 310 YAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 369
Query: 181 MGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
L+ AC+ + G F + Y + L+ + +VD+ ++G L+ A +
Sbjct: 370 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH----YSCMVDLLGRSGRLEDAYELI 425
Query: 236 KNMS-RINIVTWGALI 250
K+M + WGAL+
Sbjct: 426 KSMPMEPSSGVWGALL 441
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ L+ A + + ++H I+ D + LV MY K G+ + A +F M
Sbjct: 64 IVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLG 297
++V+W +L+SG + G G+ L M++ G +P+ V+L+S + ACA +G L G
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
KS+HG V+ + S+I+MY K G A LF++M R L+SWN ++ + +
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G+ E+ + LF M + PD +T +LL A + +GL + + +
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES-IHAYIHRCGFNADIII 302
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+++L A+ G + + I + + +A W A+L+G
Sbjct: 303 ATALLNLYAKLGRLNASEDIFEEIKDRDRIA-WTAMLAG 340
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 299/542 (55%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SA +LF+ +P + ++ +++ ++ + L ++ M + + P
Sbjct: 59 LITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPT 118
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A +A +L G ++ V LG+ ++FV S++ ++Y K G + EA F+
Sbjct: 119 QFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFD 178
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+M +KD V W++MI+G NG AV A++ M++EG + AD+ V+ ++ A L D
Sbjct: 179 QMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGW 238
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK-NMSRINIVTWGALISGF 253
++H ++ +V V+ +L DMYAK +D A+ V K + +N+V+ +LI G+
Sbjct: 239 LARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGY 298
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+ L + +E++ G EP+ + S + CA L+ G +H ++ +
Sbjct: 299 IETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDS 358
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++DMY KCG+ S + LF +++ I+WN I HGHG EA+ F +M +
Sbjct: 359 FVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSS 418
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++P+H TF SLL+A SH+GLV+EG +F M + I+P +HY+C++D+ RAG ++E
Sbjct: 419 GIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDE 478
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K + M +P W +LL C +GE A ++KL PD+ G+H +S +A
Sbjct: 479 AEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYAS 538
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+WE+V VRK MR + +KK+PG+S V+ N + H F ED SH Q E I L++LY
Sbjct: 539 LGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYER 598
Query: 553 MR 554
++
Sbjct: 599 IK 600
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 192/415 (46%), Gaps = 37/415 (8%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
L++C DL++G + + V G F+ + ++ +Y C + A+ F+ M
Sbjct: 20 LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAM 79
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
R +LV W+++++GL N R+A+ A+ M + G+ + + +A A L G
Sbjct: 80 PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGA 139
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+H +R + ++ V ++L DMY+K+G L A VF M + + V W A+I G+A+NG
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199
Query: 258 LAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
+ + +M+ G D L S L A + L ++IH ++ F+ + +
Sbjct: 200 NLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVR 259
Query: 316 TSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++ DMY+K + + AR + S +++S +I Y E+AL +F+++ V
Sbjct: 260 NALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGV 319
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF----------DLMVS-------------KYKIQ 411
+P+ TF+S++ + L+E+G D VS IQ
Sbjct: 320 EPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQ 379
Query: 412 -------PTEKHYACMVDLLARAGEVEEALKIVDSMST---EPGLAVWVALLSGC 456
T+ + +++LA+ G EA++ D M++ P +V+LL+ C
Sbjct: 380 LFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTAC 434
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 314/583 (53%), Gaps = 10/583 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DVR 73
++ +Y I A+ +F+ + V ++N+++ +S + L QM+ D+R
Sbjct: 330 LMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLR 389
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMV 132
D T A+ C L +E+ +++ + N+ V ++ + Y KCG ++ A
Sbjct: 390 ADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHR 449
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F ++ K + W+++I G + PR ++DAY +MK G+ D + L+ AC+ +
Sbjct: 450 VFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKS 509
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G VHG IR L D V SL+ +Y G L A +F M +V+W +++G
Sbjct: 510 LKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNG 569
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
+ QNG L L +M G +P +S++S AC+ + L+LG+ HGY ++ + N
Sbjct: 570 YLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDN 629
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ SVIDMY+K G + +F+ ++ R + SWN ++ YGIHG +EA+ LF +M
Sbjct: 630 AFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQR 689
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
T PD TF +L+A +HSGLV EG + D M + + + PT KHYAC++D+L RAG+++
Sbjct: 690 TGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLD 749
Query: 432 EALKI-VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EALKI + MS EPG+ +W LLS C HK +GEK+A K+ P+ + L+SN +
Sbjct: 750 EALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLY 809
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A KW+EV VR+ M++ ++K G S +E+NG++ +F+ + S + +E+I + L
Sbjct: 810 AGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLE 869
Query: 551 LEM-----RAISSWLQGHMEEHEEHDPLSTAAQYAPTYYLKIR 588
E+ R +S +Q + E E+ + L ++ Y IR
Sbjct: 870 REIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIR 912
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 245/480 (51%), Gaps = 22/480 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED---- 71
+++ YG + A ++F+ +P R + ++NS+I +S E L QM+++D
Sbjct: 225 LVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIA 284
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD +T L C ++ +G+ + A++L +V V ++++++Y KCG +N+A
Sbjct: 285 FTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQ 344
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID--ADEVVMMGLIQACAD 189
V F+ K++V W++M+ G G + D ++M G D ADEV ++ + C +
Sbjct: 345 VIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFE 404
Query: 190 LGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
+H YS+++ ++ + V + V YAK G L A VF ++ + +W A
Sbjct: 405 ESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNA 464
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-R 307
LI G++Q+ +L+ +M+S G PD ++ S L AC+QI LKLGK +HG +R R
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ + + S++ +Y CG S A LFD M+ + L+SWN ++ Y +G E ALSLF
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFR 584
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYAC-MVD 422
QM+ V+P + S+ A S + GR Y ++ AC ++D
Sbjct: 585 QMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLED------NAFIACSVID 638
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
+ A+ G V E+ K+ + + E +A W A++ G H + K+ +++ + PD+L
Sbjct: 639 MYAKNGSVMESFKVFNGLK-ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDEL 697
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 231/451 (51%), Gaps = 13/451 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VR 73
R+I +Y +R +F+ L + + +N++I +YSR E VL ++ +MI E +
Sbjct: 122 RVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLL 181
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ TF +KAC + ++++G + V+ DVFV +++++ Y G +++A+
Sbjct: 182 PDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRV 241
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE----GIDADEVVMMGLIQACAD 189
F+ M ++LV W+SMI NG E +M ++ D + ++ CA
Sbjct: 242 FKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCAR 301
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ G VHG +++ L+ +V V +L+DMY+K G ++ A +FK + N+V+W +
Sbjct: 302 DREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTM 361
Query: 250 ISGFAQNGLAGSTLELLMEMQSCG--FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+ GF+ G T +LL +M + G D V++++A+ C + L K +H Y++++
Sbjct: 362 VGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQ 421
Query: 308 FDF---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+F N ++ + + Y+KCG S A +F ++S+ + SWN +I Y +L
Sbjct: 422 -EFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLD 480
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
+ QM + + PD T SLLSA S ++ G+ L++ + +++ Y ++ L
Sbjct: 481 AYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLII-RNRLERDSFVYISLLSLY 539
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
GE+ A + D+M + L W +++G
Sbjct: 540 IHCGELSTAHVLFDAME-DKTLVSWNTMVNG 569
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 151/287 (52%), Gaps = 7/287 (2%)
Query: 91 DLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
D+++G +I + E ND + + ++ +Y CG +++ F+ +++K+L W+++I
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 150 NGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ N ++ + +M E G+ D +++ACA + + + GL+VHG ++ L
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
DV V +LV Y G + A VFK M N+V+W ++I F+ NGL+ LL +
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 269 M----QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
M F PD +L + L CA+ + +GK +HG ++ D +V+ +++DMYS
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
KCG + A+ +F +++++SWN ++ + G + L QM+
Sbjct: 336 KCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQML 382
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 289/543 (53%), Gaps = 3/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SAR + P R V ++ S+I ++ L + +M +E V P+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF A KA SL G++I AV+ G DVFVG S ++Y K ++A F+
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFD 167
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++L W++ I+ V +G+PREA++A+ ++ + + + AC+D
Sbjct: 168 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +HG +R + DV V L+D Y K + + +F M N V+W +L++ + Q
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L + + E + S L ACA + L+LG+SIH + V+ + + +
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY KCG + FD+M ++L++ N +I Y G + AL+LF +M
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 375 --KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
P++ TF SLLSA S +G VE G FD M S Y I+P +HY+C+VD+L RAG VE
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 467
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M +P ++VW AL + C H K +G A+ + KL+P D G H L+SN FA
Sbjct: 468 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+W E VR+ ++ G+KK GYS + V ++HAF +D+SH ++I L KL E
Sbjct: 528 AGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE 587
Query: 553 MRA 555
M A
Sbjct: 588 MEA 590
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
LK +S +++G + + V+ L F+ + ++N+Y K A + ++
Sbjct: 13 LKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+S+I+GL NG A+ + M++EG+ ++ +A A L G +H
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+++ LDV V S DMY KT D A +F + N+ TW A IS +G
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
+E +E + P+S++ + L AC+ L LG +HG +R FD ++ + +ID
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
Y KC + +F +M +++ +SW ++A+Y + E+A L+L+ + +V+
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+LSA + +E GR V K ++ T + +VD+ + G +E++ + D M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 441 STEPGLAVWVALLSG 455
E L +L+ G
Sbjct: 372 -PEKNLVTRNSLIGG 385
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 289/532 (54%), Gaps = 4/532 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALK 84
I A+ +F+E+P R ++ +++ Y+ ++ E L+ QM+ E + + T L
Sbjct: 169 IPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLS 228
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
A + L MG ++ V+ G V V +S++ +Y K G M+ A FE + ++ +
Sbjct: 229 AISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSIT 288
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
WS+MI G NG AV + +M G E ++G++ AC+D+G G HG +
Sbjct: 289 WSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMV 348
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ + V V+++LVDMYAK G + A F S ++IV W A+++G QNG L
Sbjct: 349 KLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALM 408
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL--VLGTSVIDMY 322
L M G P+++++ S L ACA + L+ GK +H + +F F L +G+++ MY
Sbjct: 409 LYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLH-TQILKFGFGLGASVGSALSTMY 467
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SKCG +F +M RD+I+WN II+ + +G G +A++LF +M PD TF
Sbjct: 468 SKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFI 527
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
++L A SH GLV+ G +F M+ Y + P HYACMVD+L+RAG + EA ++S++
Sbjct: 528 NVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITI 587
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
+ G +W +L C + + F +G +K++ L D + L+SN +A ++KW +V V
Sbjct: 588 DHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERV 647
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
R M+ G+ K PG S VE+N +H F++ ++ H E I L++L M+
Sbjct: 648 RYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMK 699
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 232/462 (50%), Gaps = 11/462 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGG--KNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESP 57
+K+ S++ +I Y + + +A +F ++P R V ++NS++ S P
Sbjct: 39 LKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNPLSHHR-P 97
Query: 58 FEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGS 115
L + M+ + P +F A A G + A +L ++VFV +
Sbjct: 98 LAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSNVFVST 157
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GID 174
++LN+Y K G + +A + F++M ++ V W++M+ G +EA + +++M E +
Sbjct: 158 ALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLH 217
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+E V ++ A + G+ VHG ++ + V V+ SLV MYAK G +D A HV
Sbjct: 218 KNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHV 277
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F++ N +TW A+I+G++QNG A S + + +M + GF P +LV L AC+ +G L
Sbjct: 278 FESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTL 337
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
GK HG V+ F+ + + ++++DMY+KCG A+ F+Q D++ W ++ +
Sbjct: 338 MEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGH 397
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G E+AL L+ +M + V P+ T SLL A + +E G+ + K+
Sbjct: 398 VQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQ-LHTQILKFGFGLG 456
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + + ++ G +E+ + + M +A W +++SG
Sbjct: 457 ASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIA-WNSIISG 497
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 178/355 (50%), Gaps = 3/355 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K + + + ++ +Y + +A +FE R T++++I YS+ +
Sbjct: 246 VVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESA 305
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +++QM P T L AC + L G++ V+LG+ V+V S+++++
Sbjct: 306 VRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDM 365
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A F + D+V W++M+ G V NG+ +A+ Y RM KEG+ + + +
Sbjct: 366 YAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTI 425
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L++ACA L G +H ++ L V ++L MY+K G+L+ VF+ M
Sbjct: 426 TSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPH 485
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++ W ++ISGF+QNG + L EM+ G PD V+ ++ L AC+ +G + G +
Sbjct: 486 RDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTY 545
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIAS 352
++ + L ++D+ S+ G+ S A+ + + W +++ +
Sbjct: 546 FRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGA 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL--ASHVFKNMSRI--NIVTWGAL 249
R G ++H ++++ + V SL+ Y+ L L A VF ++ ++ +W +L
Sbjct: 29 RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--R 307
++ + + + + S P S +A A A+ G +H +
Sbjct: 89 LNPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPS 148
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+ + T++++MY K G+ A+ +FD+M R+ +SW ++A Y +EA LF
Sbjct: 149 ASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFR 208
Query: 368 QMI-ETMVKPDHSTFASLLSALS-----HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
QM+ E + + ++LSA+S G+ G D MV ++ + +V
Sbjct: 209 QMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENS------LV 262
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ A+AG ++ A + +S S E W A+++G
Sbjct: 263 TMYAKAGCMDAAFHVFES-SKERNSITWSAMITG 295
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 297/556 (53%), Gaps = 14/556 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPF 58
M+ + +S+ +I +Y N + A +F + P R V YN+II +
Sbjct: 1 MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRD-PYHERNVFAYNAIIAGFVANGLAA 59
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ Y +M V PD TF ++AC M+++ +I ++G +VFVGS+++
Sbjct: 60 DGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSALV 116
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
N Y+K +A FE++ +D+V W++MING G +AV +KRM +EGI
Sbjct: 117 NTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRF 176
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ +GD G ++HG + + V V +L+DMY K H + A +F+ +
Sbjct: 177 TTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMI 236
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ ++ +W ++IS Q TL L +M PD +++ + L AC+ + L G+
Sbjct: 237 NEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGR 296
Query: 299 SIHGYTV------RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
IHGY + +++L +++DMY+KCG A +FD M+++D+ SWN++I
Sbjct: 297 EIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMG 356
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y +HG+G EAL +F +M E +KPD TF +LSA SH+G V +GR + M ++ + P
Sbjct: 357 YAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIP 416
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
T +HY C++D+L RAG + EA + + E L +W+ALL C H +G V +K+
Sbjct: 417 TIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKI 476
Query: 473 LKLNPDDL--GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI 530
+L P G + L+S+ + + ++EE VR+TM++ +KK PG S +E+ L+ F
Sbjct: 477 TQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFS 536
Query: 531 MEDKSHNQYEDIVYVL 546
M D++H++ ++ L
Sbjct: 537 MGDRTHHELNALINCL 552
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 301/535 (56%), Gaps = 3/535 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L++ N ++ +YG D+ S+ +F + + ++NS I ++ +V
Sbjct: 246 VLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDV 305
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ M + DV P S T + L A V L +G+E+ ++ +D+F+ ++++++
Sbjct: 306 LEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDM 365
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G +A FE ++ +++V W++MI L NG EA M+K G + +
Sbjct: 366 YAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTL 425
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ L+ AC+ + + G +H +SIRR L D+ V +L+D+YAK G L+LA ++F + S
Sbjct: 426 VNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIF-DRSE 484
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V++ LI G++Q+ +L L +M+ G E D+VS + L AC+ + K GK I
Sbjct: 485 KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEI 544
Query: 301 HGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG V+R D + L S++D+Y+K G+ A +F+++ +D+ SWN +I YG+HG
Sbjct: 545 HGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQI 604
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ A LF M + ++ DH ++ ++LS SH GLV+ G+ +F M+++ I+P + HYAC
Sbjct: 605 DVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYAC 663
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG++ E+ +I+ +M VW ALL C H + A+ + +L P++
Sbjct: 664 MVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEN 723
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
G + L+ N ++ W E GV+K M+ ++K P YS V+ +L AF++ D+
Sbjct: 724 SGYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGDE 778
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 228/445 (51%), Gaps = 8/445 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPF 58
++ L+A G ++ Y DI SA + P LR +NS+ A + P
Sbjct: 38 LVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPC 97
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLK---MGEEIWRKAVELGYG-NDVFVG 114
E L +YN+M++ VRPD TF AL A ++ + G E+ A+ G DVF G
Sbjct: 98 EALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAG 157
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
++++ Y CG+ +A F++M +D+V W+S+++ L+ NG +A A M + G+
Sbjct: 158 NTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVP 217
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ ++ ++ AC D FGL VHG ++ LN V + +LVDMY K G L+ + HV
Sbjct: 218 VNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHV 277
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F M N V+W + I FA G LE+ M P SV+L S L A +G+
Sbjct: 278 FNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYF 337
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LGK +HGY++RR + ++ + +++DMY+K G A A+F+ ++ R+++SWN +IA+
Sbjct: 338 HLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANL 397
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G EA L ++M + P+ T +LL A S V+ G+ + + +
Sbjct: 398 TQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDL 457
Query: 414 EKHYACMVDLLARAGEVEEALKIVD 438
A ++D+ A+ G++ A I D
Sbjct: 458 FVSNA-LIDVYAKCGQLNLARYIFD 481
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 254/476 (53%), Gaps = 21/476 (4%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR----KESPFEVLGLYN 65
GN++ A+ G D AR++F+E+P R V ++NS++ A +++ V+G
Sbjct: 157 GNTLVTFYAVCGRAAD---ARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVG--- 210
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
M++ V + ++ L AC + D G + ++ G + V +G++++++Y K G
Sbjct: 211 -MMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFG 269
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
+ +M F MQ K+ V W+S I G + ++ ++ M + + V + L+
Sbjct: 270 DLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLP 329
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
A DLG G +HGYSIRR + D+ + +L+DMYAK G + AS +F+N+ N+V+
Sbjct: 330 ALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVS 389
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W A+I+ QNG L++EMQ G P+S +LV+ L AC+++ +K+GK IH +++
Sbjct: 390 WNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSI 449
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
RR +L + ++ID+Y+KCG + AR +FD+ + +D +S+N +I Y E+L
Sbjct: 450 RRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSE-KDGVSYNTLIVGYSQSQCCFESLH 508
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDL 423
LF QM ++ D +F LSA S+ ++G+ ++V ++ + A ++D+
Sbjct: 509 LFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVK--RLLDSHPFLANSLLDV 566
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+ G ++ A KI + + T+ +A W ++ G H + VA ++ L DD
Sbjct: 567 YTKGGMLDTASKIFNRI-TQKDVASWNTMILGYGMHGQI----DVAFELFDLMKDD 617
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 268/459 (58%), Gaps = 9/459 (1%)
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
V LG+ ++FV S++ ++Y KCG ++EA F++M +KD V W++MI+G NG A
Sbjct: 67 GVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAA 126
Query: 162 VDAYKRMKKEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
V +++ MK+EG + AD+ V ++ A L D S+H + L+V V+ +L+D
Sbjct: 127 VLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALID 186
Query: 221 MYAKTGHLDLASHVFK-NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
MYAK+ ++ AS V K + N+V+ ++I G+ + L + +E++ G EP+
Sbjct: 187 MYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEF 246
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR----RFDFNLVLGTSVIDMYSKCGVPSCARALF 335
+ S + CA L+ G +H ++ R F +G++++DMY KCG+ S + LF
Sbjct: 247 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF---VGSTLVDMYGKCGLISLSMQLF 303
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
++++ R I+WN +I + HGHG EA+ F +MI + ++P+H F SLL+A SH+GLV+
Sbjct: 304 NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVD 363
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG +F M + I+P E+HY+C++D RAG ++EA K + M +P W +LL
Sbjct: 364 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 423
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C +GE A+ ++KL P + GIH +S +A +WE+V VRK MR S +KK+P
Sbjct: 424 CRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLP 483
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+S V+ N + H F ED SH Q +DI L++L ++
Sbjct: 484 GFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIK 522
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 289/538 (53%), Gaps = 31/538 (5%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY +DI +A + F + Y + ++ + ++ QM E +
Sbjct: 391 GSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIV 435
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ LK C +L +GE+I + ++ G+ +V+V S ++++Y K GK++ A+
Sbjct: 436 PNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKI 495
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +++ D+V W++MI G + + EA++ +K M+ +GI +D + I ACA +
Sbjct: 496 FRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQAL 555
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H S + D+ + +LV +YA+ G + A F + + V+W +L+SGF
Sbjct: 556 DQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGF 615
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFN 311
AQ+G L + +M G E +S + SA+ A A I +++GK IHG +R+ +D
Sbjct: 616 AQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHG-MIRKTGYDSE 674
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++I +Y+KCG + D ISWN +I Y HG G EAL LF M +
Sbjct: 675 TEVSNALITLYAKCG-------------TIDDISWNSMITGYSQHGCGFEALKLFEDMKQ 721
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V P+H TF +LSA SH GLV+EG +F M + + P +HYAC+VDLL R+G +
Sbjct: 722 LDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLS 781
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A + V+ M +P VW LLS C+ HK IGE A +L+L P D + LVSN +A
Sbjct: 782 RAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYA 841
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ KW+ R+ M+ G+KK PG S VEV+ +HAF D++H + + I L+ L
Sbjct: 842 VSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGL 899
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 234/478 (48%), Gaps = 38/478 (7%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K S+ ++ LY ++ SA ++F + R +YNS+I +++
Sbjct: 277 VLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRA 336
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M + +PD T L AC S+ L G++ A++ G +D+ V S+L+L
Sbjct: 337 LALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVKC + A F +C+ + N ++ + +M+ EGI ++
Sbjct: 397 YVKCSDIKTAHEFF--------LCYGQLDN-------LNKSFQIFTQMQIEGIVPNQFTY 441
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++ C LG + G +H ++ +V V + L+DMYAK G LD A +F+ +
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++V+W A+I+G+ Q+ L L EMQ G + D++ SA+ ACA I L G+ I
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 301 HGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H + + + +L +G +++ +Y++CG A A FDQ+ ++D +SWN +++ + G+
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EEAL++F QM + ++ + TF S +SA ++ V G+ ++ TE A
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNA- 680
Query: 420 MVDLLARAGEVE------------------EALKIVDSM---STEPGLAVWVALLSGC 456
++ L A+ G ++ EALK+ + M P +V +LS C
Sbjct: 681 LITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 230/477 (48%), Gaps = 35/477 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I Y D+ A +F+E+P+R + +N I + + V GL+ +M+ ++V
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161
Query: 75 DSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D F V L+ C + + + E+I K + G+ + F+ + +++LY K G ++ A
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE ++ +D V W +MI+GL NG EA+ + ++ ++ AC +
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFF 267
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
FG +HG +++ + + V +LV +Y+++G+L A +F MS+ + V++ +LISG
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ G L L +M +PD V++ S L ACA +G L GK H Y ++ ++
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
V+ S++D+Y KC A F YG + ++ +F QM
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIE 432
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P+ T+ S+L + G + G V K Q + ++D+ A+ G+++
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDH 491
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
ALKI + E + W A+++G H KF+ + K++ + D++G + +S
Sbjct: 492 ALKIFRRLK-ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAIS 547
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 243/523 (46%), Gaps = 58/523 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + SA+K+FE L R ++ ++I S+ E + L+ Q++
Sbjct: 205 LIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV------- 257
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
L AC + + G+++ ++ G+ ++ +V ++++ LY + G ++ A F
Sbjct: 258 -------LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFH 310
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D V ++S+I+GL G A+ +K+M + D V + L+ ACA +G
Sbjct: 311 CMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPN 370
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G H Y+I+ + D+ V+ SL+D+Y K + A F + +G L +
Sbjct: 371 GKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--------LCYGQLDN---- 418
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ ++ +MQ G P+ + S L C +G LG+ IH ++ F FN+ +
Sbjct: 419 ---LNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYV 475
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G A +F +++ D++SW +IA Y H EAL+LF +M + +
Sbjct: 476 SSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGI 535
Query: 375 KPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYACMVDLL 424
K D+ FAS +SA + +++GR Y DL + +V L
Sbjct: 536 KSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN-----------ALVSLY 584
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
AR G+V EA D + + ++ W +L+SG F E+ ++N L I++
Sbjct: 585 ARCGKVREAYAAFDQIYAKDNVS-WNSLVSGFAQSGYF---EEALNIFAQMNKAGLEINS 640
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY-SVVEVNGEL 526
F + +A VR + GM + GY S EV+ L
Sbjct: 641 FT--FGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNAL 681
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 189/438 (43%), Gaps = 61/438 (13%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+G + M + VR +S TF L+ C++ + G +++
Sbjct: 66 IGYLHLMEQHGVRANSQTFLWLLEGCLN-------------------SRSFYDGLKLIDF 106
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y+ G +N A+ F++M + L CW+ + N + ++RM + ++ DE +
Sbjct: 107 YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIF 166
Query: 181 MGLIQACADLGDS-RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+++ C+ S RF +H +I + L+D+Y K G L A VF+N+
Sbjct: 167 AVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLK 226
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ V+W A+ISG +QNG + L ++ L AC ++ F + GK
Sbjct: 227 ARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQ 272
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG +++ F + +++ +YS+ G S A +F M RD +S+N +I+ G+
Sbjct: 273 LHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGY 332
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW------------------ 400
AL+LF +M KPD T ASLLSA + G + G+ +
Sbjct: 333 INRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGS 392
Query: 401 -FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE---PGLAVWVALLSGC 456
DL V I+ + + C L + ++ +I M E P + ++L C
Sbjct: 393 LLDLYVKCSDIKTAHEFFLCYGQL----DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTC 448
Query: 457 HNHKKFSIGEKVAKKVLK 474
+GE++ +VLK
Sbjct: 449 TTLGATDLGEQIHTQVLK 466
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 300/545 (55%), Gaps = 5/545 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I LY +++ AR++F+E+ R + ++++II Y + P L L++QM + P
Sbjct: 43 HVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVP 99
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F + AC SL L G ++ ++++LG + FV ++++++Y+KCG +A++
Sbjct: 100 NEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVH 159
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M + V ++++I G V N QP + ++A+K M+++G D GL+ C D
Sbjct: 160 NVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFW 219
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G+ +H I+ +L + ++ MY+K ++ A VF + ++++W L++
Sbjct: 220 RGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACC 279
Query: 255 QNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
L + +M C +PD + L ACA + ++ GK IHG+ +R + V
Sbjct: 280 FCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDV 339
Query: 314 -LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++MY+KCG + +F + R+L+SWN IIA++G HG G AL F +M
Sbjct: 340 GVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTV 399
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ PD TF LL+A +H+GLVEEG+ +F+ M Y I P +H++C++DLL RAG ++E
Sbjct: 400 GIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQE 459
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + ++ + + +LLS C H IGE +A ++LKL P + L+SN +A
Sbjct: 460 AEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYAS 519
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ W VA K ++ SG+KK PG+S+++V G F M D SH++ E+I +K L
Sbjct: 520 DEMWGGVAEAWKMLKYSGLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWT 579
Query: 553 MRAIS 557
+ +S
Sbjct: 580 VSEVS 584
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 194/412 (47%), Gaps = 15/412 (3%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L C + G + A++ G +D+ V + ++NLY KCG + A F++M ++L
Sbjct: 10 LHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNL 69
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V WS++I+G GQP A++ + +M+ I +E V +I ACA L GL VH
Sbjct: 70 VSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQ 126
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
S++ V +L+ MY K G A V MS N V++ ALI+GF +N
Sbjct: 127 SLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKG 186
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDM 321
+E M+ GF PD + L C G +H ++ + + +G +I M
Sbjct: 187 IEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITM 246
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHST 380
YSK + A +F ++ +DLISWN ++ + E AL +F M++ VKPD T
Sbjct: 247 YSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFT 306
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
FA +L+A + + G+ ++ + Q A +V++ A+ G ++ + +
Sbjct: 307 FAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNA-LVNMYAKCGSIKNSYDVFRRT 365
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAK-----KVLKLNPDDLGIHALVS 487
S + L W +++ NH +G + + K + ++PD + L++
Sbjct: 366 S-DRNLVSWNTIIAAFGNH---GLGARALEHFEKMKTVGIHPDSVTFVGLLT 413
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 9/302 (2%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ CA + GLS+H +++ + D+ V ++++Y+K G++ A +F MS N
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W A+ISG+ Q G L L +M+ P+ S + ACA + L G +H
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHA 125
Query: 303 YTVRRFDFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+++ ++ + ++I MY KCG+ + A + + M + +S+N +IA + + E+
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
+ F M + PD TF+ LL + G M+ K ++ + ++
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMI-KLNLEDSAFIGNVII 244
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK---LNPD 478
+ ++ +EEA K+ + E L W L++ C K +V + +L + PD
Sbjct: 245 TMYSKFNLIEEAEKVF-GLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPD 303
Query: 479 DL 480
D
Sbjct: 304 DF 305
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 117/236 (49%), Gaps = 8/236 (3%)
Query: 1 MIKTNL--SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
MIK NL SA+ +V II +Y N I A K+F + + + ++N+++ A +
Sbjct: 228 MIKLNLEDSAFIGNV--IITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHE 285
Query: 59 EVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L ++ M+ V+PD TF L AC L ++ G++I + DV V +++
Sbjct: 286 RALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNAL 345
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+N+Y KCG + + F + ++LV W+++I +G A++ +++MK GI D
Sbjct: 346 VNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDS 405
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLA 231
V +GL+ AC G G V+ S+ + ++ + L+D+ + G L A
Sbjct: 406 VTFVGLLTACNHAGLVEEG-QVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEA 460
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 269/468 (57%), Gaps = 1/468 (0%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+ A V+ +L ++ +A G ++ V + ++ Y +++A F+ M +D
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V WS M+ G G ++ + + G D + +I+AC DL + + G +H
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ L+LD V +LVDMY K ++ A +F M ++VTW +I G+A+ G A +
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L L +M+ G PD V++V+ + ACA++G + + I Y R+ F +++LGT++IDM
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG AR +FD+M+ +++ISW+ +IA+YG HG G +AL LF M+ + + PD T
Sbjct: 306 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITL 365
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
ASLL A SH+GLVEEG +F M Y ++ KHY C+VDLL RAG ++EALK++ SM+
Sbjct: 366 ASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
E +W A L C HK + EK A +L+L + G + L+SN +A +WE+VA
Sbjct: 426 IEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAK 485
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+R M + +KK PG++ +EV+ + H F + D +H + ++I +LK L
Sbjct: 486 IRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSL 533
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 261/445 (58%), Gaps = 1/445 (0%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G ++ V + ++ Y +++A F+ M +D V WS M+ G G +
Sbjct: 765 GMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 824
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ + + G D + +I+AC DL + + G +H + L+LD V +LVDMY K
Sbjct: 825 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 884
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
++ A +F M ++VTW +I G+A+ G A +L L +M+ G PD V++V+ +
Sbjct: 885 REIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVV 944
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
ACA++G + ++I Y R+ F +++LGT++IDM++KCG AR +FD+M+ +++I
Sbjct: 945 FACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVI 1004
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SW+ +IA+YG HG G +AL LF M+ + + P+ T SLL A SH+GLVEEG +F M
Sbjct: 1005 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXM 1064
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
Y ++ KHY C+VDLL RAG ++EALK++ SM+ E +W A L C HK +
Sbjct: 1065 WEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXL 1124
Query: 465 GEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
EK A +L+L P + G + L+SN +A +WE+VA +R M + +KK+PG++ +EV+
Sbjct: 1125 AEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDN 1184
Query: 525 ELHAFIMEDKSHNQYEDIVYVLKKL 549
+ H F + D +H + ++I +LK L
Sbjct: 1185 KSHQFSVGDTTHPRSKEIYEMLKSL 1209
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 269/579 (46%), Gaps = 65/579 (11%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I Y + A LF+ + +R +++ ++ +++ G + ++I+ RP
Sbjct: 99 KLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARP 158
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T ++AC L +L+MG I + G D FV ++++++YVKC ++ +A F
Sbjct: 159 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF 218
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+KMQ +DLV W+ MI G G+ E++ +++M++EG+ D+V M+ ++ ACA LG
Sbjct: 219 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 278
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+ Y R+ LDV + T+++DMYAK G ++ A +F M N+++W A+I+ +
Sbjct: 279 KARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 338
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G L+L M S G PD ++L S L AC+ G ++ G +R F
Sbjct: 339 YHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEG-------LRFF------ 385
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+S+ + YS D+ + ++ G G +EAL L M +
Sbjct: 386 -SSMWEDYS---------------VRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT---I 426
Query: 375 KPDHSTFASLLSAL-SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ D + + L A +H +V + L+ + + HY + ++ A AG E+
Sbjct: 427 EKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQ---NPGHYVLLSNIYANAGRWEDV 483
Query: 434 LKIVDSMSTE-----PGLAVWVALLSGCHNHKKFSIGEKV---AKKVLKL-----NPDDL 480
KI D MS PG W+ + + H +FS+G+ +K++ ++ N +L
Sbjct: 484 AKIRDLMSQRRLKKTPGWT-WIEVDNKSH---QFSVGDTTHPRSKEIYEMLKSLSNKLEL 539
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKS-----GMKKVPGYSVVEVNGELH--AFIMED 533
+ +NF + E G+ T + G+ P ++ + + L +E
Sbjct: 540 VGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLREKKLYLEL 599
Query: 534 KSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEHEEHDP 572
H+ ++VY ++YLE SW + + E P
Sbjct: 600 HVHSSIVNLVYCSIRVYLE-----SWFKVTVSFIESRGP 633
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 217/461 (47%), Gaps = 51/461 (11%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y + A LF+ + +R +++ ++ +++ G + ++I+ RP
Sbjct: 775 KLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARP 834
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T ++AC L +L+MG I + G D FV ++++++Y KC ++ +A F
Sbjct: 835 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLF 894
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+KM +DLV W+ MI G G E++ + +M++EG+ D+V M+ ++ ACA LG
Sbjct: 895 DKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 954
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
++ Y R+ LDV + T+++DM+AK G ++ A +F M N+++W A+I+ +
Sbjct: 955 KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 1014
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G L+L M G P+ ++LVS L AC+ G ++ G +R F
Sbjct: 1015 YHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG-------LRFFS----- 1062
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
M+ D D+ + ++ G G +EAL L M
Sbjct: 1063 -----XMWE------------DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT---X 1102
Query: 375 KPDHSTFASLLSAL-SHSG--LVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGEV 430
+ D + + L A +H L E+ S ++QP HY + ++ A AG
Sbjct: 1103 EKDEGLWGAFLGACRTHKDVXLAEKA------ATSLLELQPQNPGHYILLSNIYANAGRW 1156
Query: 431 EEALKIVDSMSTE-----PGLAVWVALLSGCHNHKKFSIGE 466
E+ KI D MS PG W+ + + H +FS+G+
Sbjct: 1157 EDVAKIRDLMSQRRLKKIPGWT-WIEVDNKSH---QFSVGD 1193
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 287/513 (55%), Gaps = 3/513 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F E+P+R + ++N++++ +++ + L M +RPD+ T + + + +
Sbjct: 107 AHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILR 166
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR--KDLVCWS 146
+ L ++ + +G DV V ++++ Y KCG + A F+++ + +V W+
Sbjct: 167 VKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWN 226
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
SMI + +AV+ YK M G D ++ L+ +C GL VH + ++
Sbjct: 227 SMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKL 286
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ DV V +L+ MY+K G + A +F MS V+W +IS +A+ G + L
Sbjct: 287 GCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLF 346
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
M++ G +PD V++++ + C Q G L+LGK I Y++ N+V+ ++IDMY+KC
Sbjct: 347 NAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKC 406
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + A+ LF M +R ++SW +I + ++G ++AL LF M+E +KP+H TF ++L
Sbjct: 407 GGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVL 466
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
A +H GLVE G F++M KY I P HY+CMVDLL R G + EAL+I+ SM EP
Sbjct: 467 QACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPD 526
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
+W ALLS C H K +G+ V++++ +L P + ++N +A + WE VA +R+
Sbjct: 527 SGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRN 586
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
M+ ++K PG S+++VNG+ F +ED+ H +
Sbjct: 587 MKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPE 619
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 204/399 (51%), Gaps = 5/399 (1%)
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ QM + + P++STF LKAC L L+ + I ++ + +++FV ++ +++
Sbjct: 38 LILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDM 97
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVKCG++ +A F +M +D+ W++M+ G +G + M+ GI D V +
Sbjct: 98 YVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTV 157
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK--NM 238
+ LI + + +V+ + IR +++DV V +L+ Y+K G+L A +F N
Sbjct: 158 LLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINS 217
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++V+W ++I+ +A + M GF PD ++++ L +C Q L G
Sbjct: 218 GLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGL 277
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + V+ D ++ + ++I MYSKCG AR LF+ M + +SW V+I++Y G
Sbjct: 278 LVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKG 337
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+ EA++LF M KPD T +L+S +G +E G+ W D ++
Sbjct: 338 YMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGK-WIDNYSINNGLKDNVVVC 396
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
++D+ A+ G +A ++ +M+ + W +++ C
Sbjct: 397 NALIDMYAKCGGFNDAKELFYTMANRT-VVSWTTMITAC 434
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 46/366 (12%)
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
L W+S LV G + A+ +++MK+ GI + +++ACA L R +H
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+ ++ ++ VQT+ VDMY K G L+ A +VF M +I +W A++ GFAQ+G
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR 137
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVID 320
LL M+ G PD+V+++ + + ++ L +++ + +R ++ + ++I
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA 197
Query: 321 MYSKCGVPSCARALFDQMQS--RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
YSKCG A LFD++ S R ++SWN +IA+Y +A++ + M++ PD
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDI 257
Query: 379 STFASLLSA-----------LSHS------------------------GLVEEGRYWFDL 403
ST +LLS+ L HS G V R+ F+
Sbjct: 258 STILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNG 317
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST---EPGLAVWVALLSGCHNHK 460
M K + + M+ A G + EA+ + ++M +P L +AL+SGC
Sbjct: 318 MSDKTCVS-----WTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTG 372
Query: 461 KFSIGE 466
+G+
Sbjct: 373 ALELGK 378
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y D+ SAR LF + + ++ +I AY+ K E + L+N M
Sbjct: 295 VNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGE 354
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD T + C L++G+ I ++ G ++V V ++++++Y KCG N+A
Sbjct: 355 KPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKE 414
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F M + +V W++MI NG ++A++ + M + G+ + + + ++QACA G
Sbjct: 415 LFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGL 474
Query: 193 SRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
GL +++ +N + + +VD+ + GHL A + K+M + W AL+
Sbjct: 475 VERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALL 534
Query: 251 SGFAQNG 257
S +G
Sbjct: 535 SACKLHG 541
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 298/542 (54%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y A K+F+ + + + N +I+ Y R + + + ++ ++ + P
Sbjct: 209 LIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPT 268
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT + C + ++ G+++ A + G+ ++ VG++++ +Y G EA F
Sbjct: 269 DYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFS 328
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSR 194
M K+L+ W+++I+G +G ++AVDA+ + E GI+ D ++ ++ C+D +
Sbjct: 329 SMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLE 388
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
GL +HG+ ++ DV V T+LVD+YAK L A VF ++S I ++ A+++GF
Sbjct: 389 LGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFL 448
Query: 255 QN-GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
++ G + L +++ G +PD V+ L A L+ G+S H YTV+ FD N+
Sbjct: 449 ESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNI 508
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ SVI MY+KCG A +F+ M RD ISWN +I++Y +HG +++L LF +M
Sbjct: 509 SVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRK 568
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD T ++L A ++SGL ++G F+LM KY I+P +HYACM DLL RAG + E
Sbjct: 569 GFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSE 628
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+ I+ +W L++ C H + G+ +K +L L+P + G + LVSN +A
Sbjct: 629 AMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYAS 688
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E+ +E A VRK M +K G S +E++ ++H F+ DK H + +I L+ L E
Sbjct: 689 EKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFVASDKDHPESREIYTRLELLTDE 748
Query: 553 MR 554
M+
Sbjct: 749 MK 750
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 237/482 (49%), Gaps = 17/482 (3%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++ LY N + A+K+F+ + R T+ S+I Y + M K
Sbjct: 107 NVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENF 166
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T TV L+AC S D +GE+I ++ G+ +VFVG+S++ +Y K G + A F
Sbjct: 167 NEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVF 226
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC-ADLGDS 193
+ M KD+ C + MI G +A++ +K + +G + + +I C DLG
Sbjct: 227 DSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVE 286
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G + G + + + V +++ MY +G A +F +MS N+++W ALISG+
Sbjct: 287 E-GKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGY 345
Query: 254 AQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFD 309
+++G ++ + + G DS L + L C+ L+LG IHG+ ++ D
Sbjct: 346 SRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACD 405
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY-GIHGHGEEALSLFLQ 368
N + T+++D+Y+KC AR +FD + ++ + S+N I+A + G E+ + LF Q
Sbjct: 406 VN--VATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQ 463
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+ VKPD TF+ LLS L++ +E+GR F K ++ + A+ G
Sbjct: 464 LRLAGVKPDMVTFSRLLSLLANQASLEKGRS-FHAYTVKTGFDTNISVANSVISMYAKCG 522
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHA 484
+E+A ++ + M+ ++ W AL+S H K + E++ +K +PD+ I A
Sbjct: 523 SIEDAHQMFNIMNCRDSIS-WNALISAYALHGQAQKSLFLFEEMKRK--GFDPDEFTILA 579
Query: 485 LV 486
++
Sbjct: 580 IL 581
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 13/430 (3%)
Query: 36 LPLRGVDTYNSIIIAYSRK--------ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
P + T NSI S K ++P + Y+ + ED + + +K +
Sbjct: 20 FPQLEIKTPNSIFTCSSSKPVHNNNNLQNPKPNVTRYSTISNEDTLL-FNDWPELIKISI 78
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
D +G+ + V+ G +D F G+++LNLYVK +++ A F++M+ ++ + W+S
Sbjct: 79 GSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTS 138
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I G + + + A M K G + +E ++QAC+ D G +H + I+
Sbjct: 139 LIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSG 198
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ +V V TSL+ MY K+G D+A VF +M +I +I + + G G +E+
Sbjct: 199 FDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFK 258
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+ + GFEP + + + C ++ GK + G + F +G ++I MY G
Sbjct: 259 NLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSG 318
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLL 385
+P A +F M ++LISW +I+ Y G+G++A+ FL + + + + D + ++L
Sbjct: 319 MPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAIL 378
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
S +E G V K +VDL A+ +++ A + D +S + G
Sbjct: 379 DCCSDCNNLELG-LQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNK-G 436
Query: 446 LAVWVALLSG 455
+A + A+L+G
Sbjct: 437 IASFNAILAG 446
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 7/293 (2%)
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D G +VH Y ++ D +++++Y K LDLA VF M N +TW +LI
Sbjct: 82 DFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIK 141
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+ ++ S + +M G + + L AC+ LG+ IH + ++ FD
Sbjct: 142 GYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDE 201
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N+ +GTS+I MY+K G A +FD M +D+ N +I YG G+G +A+ +F ++
Sbjct: 202 NVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLL 261
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+P TF +++S + VEEG+ L KY ++ + +G
Sbjct: 262 NDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAF-KYGFLSETSVGNAIITMYGNSGMP 320
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
+EA ++ SMS E L W AL+SG + + G+K L L+ D+LGI+
Sbjct: 321 KEAERMFSSMS-EKNLISWTALISG---YSRSGYGKKAVDAFLGLH-DELGIN 368
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAY----SRKESPFEVLGLYNQ 66
N ++ LY + SAR +F+ L +G+ ++N+I+ + +E P + L+NQ
Sbjct: 407 NVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDP---MILFNQ 463
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+ V+PD TF+ L + L+ G V+ G+ ++ V +S++++Y KCG
Sbjct: 464 LRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGS 523
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +A F M +D + W+++I+ +GQ ++++ ++ MK++G D DE ++ ++QA
Sbjct: 524 IEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQA 583
Query: 187 CADLGDSRFGLSVHG-----YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
C G + G+ + Y I+ L + + D+ + G+L A + K
Sbjct: 584 CTYSGLWKDGICLFNLMEPKYGIKPLL----EHYACMADLLGRAGYLSEAMDIIK 634
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT + +I++Y I A ++F + R ++N++I AY+ + L
Sbjct: 500 VKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSL 559
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV------ELGYGNDVFVG- 114
L+ +M ++ PD T L+AC +W+ + E YG +
Sbjct: 560 FLFEEMKRKGFDPDEFTILAILQACTY-------SGLWKDGICLFNLMEPKYGIKPLLEH 612
Query: 115 -SSMLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMIN 150
+ M +L + G ++EAM ++ K + W +++N
Sbjct: 613 YACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVN 650
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 296/526 (56%), Gaps = 3/526 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I ARKLF+E+P R + T+NS+I ++ + E + LY+ M+ E V PD+ TF+ KA
Sbjct: 51 ITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKA 110
Query: 86 CVSLMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+ + G++ AV LG+ +D FV + ++++Y K GKM +A F+++ KD+V
Sbjct: 111 FSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVL 170
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
++++I G +G EA++ ++ M I +E + ++ +C +LGD G +HG +
Sbjct: 171 FTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVV 230
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ L V QTSL+ MY+K ++ + VF +++ + VTW + I G QNG L
Sbjct: 231 KYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALS 290
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYS 323
+ EM C P+ +L S L AC+ + L+ G+ IH TV+ D N + ++I +Y
Sbjct: 291 MFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYG 350
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG AR++FD + D++S N +I +Y +G G EAL LF ++ + ++P+ TF S
Sbjct: 351 KCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFIS 410
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A +++GLVEEG F L+ + + I+ T HY CM+DLL RA EEA +++
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEE-GKN 469
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P + W LL+ C H + + EK KK+L P D G H L++N +A KW+ V ++
Sbjct: 470 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMK 529
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
R +KK P S V+++ E+H F+ D SH + +I +L +L
Sbjct: 530 SAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHEL 575
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 194/373 (52%), Gaps = 10/373 (2%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F G +++ Y+KC + EA F++M + +V W+SMI+ V G+ +EA++ Y M E
Sbjct: 36 FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFE 95
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDL 230
G+ D + +A +++G SR G HG ++ + D V T +VDMYAK G +
Sbjct: 96 GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKD 155
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF + ++V + ALI G+ Q+GL G LE+ +M +P+ +L S L++C
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGN 215
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+G L GK IHG V ++ V+ TS++ MYSKC + + +F+ + ++W
Sbjct: 216 LGDLVNGKLIHGLVV-KYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTS 274
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
I +G E ALS+F +M+ + P+H T +S+L A S ++E G + V K
Sbjct: 275 FIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTV-KL 333
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN---HKKFSIG 465
+ + A ++ L + G VE+A + DS++ +++ + + N H+ +
Sbjct: 334 GVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELF 393
Query: 466 EKVAKKVLKLNPD 478
E++ K L L P+
Sbjct: 394 ERLKK--LGLEPN 404
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 183/360 (50%), Gaps = 6/360 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + AR +F+ + + V + ++I+ Y++ E L ++ M+ ++P+
Sbjct: 143 IVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPN 202
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L +C +L DL G+ I V+ G + V +S+L +Y KC + +++ F
Sbjct: 203 EYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFN 262
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V W+S I GLV NG+ A+ ++ M + I + + ++ AC+ L
Sbjct: 263 SLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEA 322
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +++ ++ + V +L+ +Y K G+++ A VF +++ ++IV+ +I +AQ
Sbjct: 323 GEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQ 382
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG LEL ++ G EP+ V+ +S LLAC G ++ G I +++ R + ++ L
Sbjct: 383 NGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQI--FSLIRNNHSIELT 440
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
T +ID+ + A L ++ ++ D+I W ++ + IHG E A +M++
Sbjct: 441 RDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLD 500
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 125/258 (48%), Gaps = 1/258 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + S ++ +Y N + + K+F L T+ S I+ +
Sbjct: 229 VVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVA 288
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ +M++ + P+ T + L AC SL L+ GE+I V+LG + FV +++++L
Sbjct: 289 LSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHL 348
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A F+ + D+V ++MI NG EA++ ++R+KK G++ + V
Sbjct: 349 YGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTF 408
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ AC + G G + H + L T ++D+ + + A+ + +
Sbjct: 409 ISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK 468
Query: 240 RINIVTWGALISGFAQNG 257
+++ W L++ +G
Sbjct: 469 NPDVIQWRTLLNACKIHG 486
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S + C L KS+H + ++ G +ID Y KC V + AR LFD+M +R
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNR 64
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
+++WN +I+S+ G +EA+ L+ M+ V PD TF+++ A S G+ EG+
Sbjct: 65 HIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAH 124
Query: 402 DLMVSKYKIQPTEKHYAC-MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
L V + ++ A +VD+ A+ G++++A + D + + + ++ AL+ G + H
Sbjct: 125 GLAVV-LGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRV-LDKDVVLFTALIVGYNQH 181
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 293/544 (53%), Gaps = 12/544 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ +A KLF+ +P + + ++ +++ Y + E + L+ M K ++PD + L +
Sbjct: 300 VRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C SL L+ G ++ ++ GND +V +S++++Y KC + EA F+ D+V +
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419
Query: 146 SSMINGLVFNGQPREAVDA---YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
++MI G G E DA + M+ I + + L++A A L +HG
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ LNLD+ ++L+ +Y+ L + VF M ++V W ++ SG+ Q
Sbjct: 480 MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEA 539
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L L +E+Q PD + V + A + L+LG+ H ++R + N + +++DM
Sbjct: 540 LNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG P A FD SRD++ WN +I+SY HG G +AL + +M+ ++P++ TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITF 659
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+LSA SH+GLVE+G F+LM+ ++ I+P +HY CMV LL RAG + EA ++++ M
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMP 718
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
T+P VW +LLSGC + E A+ + +P D G L+SN +A + W +
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKK 778
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQ 561
VR+ M+ G+ K PG S +E+N E+H F+ +DKSH + I VL L +++R
Sbjct: 779 VRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR------- 831
Query: 562 GHME 565
GHM+
Sbjct: 832 GHMK 835
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 233/449 (51%), Gaps = 8/449 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + +I AR +F+ LP + T+ ++I + + L L+ Q+++ +V PD
Sbjct: 189 LIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPD 248
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC L L+ G++I + G+ D + + +++ YVKCG++ A F+
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFD 308
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M K+++ W+++++G N +EA++ + M K G+ D ++ +CA L F
Sbjct: 309 GMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEF 368
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y+I+ +L D V SL+DMYAK L A VF + ++V + A+I G+++
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSR 428
Query: 256 NGLA---GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
G L + +M+ P ++ VS L A A + L L K IHG +F NL
Sbjct: 429 LGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF-KFGLNL 487
Query: 313 VL--GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ G+++I +YS C +R +FD+M+ +DL+ WN + + Y EEAL+LFL++
Sbjct: 488 DIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQ 547
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +PD TF +++A + ++ G+ F + K ++ ++D+ A+ G
Sbjct: 548 LSRDRPDEFTFVDMVTAAGNLASLQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNH 459
E+A K DS ++ + W +++S NH
Sbjct: 607 EDAHKAFDSAASR-DVVCWNSVISSYANH 634
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 192/379 (50%), Gaps = 7/379 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
++ LY +V ARK+FE++P R + T+++++ A + E L ++ + P
Sbjct: 85 LMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSP 144
Query: 75 DSSTFTVALKACVSL--MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ + ++AC L M ++ V+ + DV+VG+ +++ Y+K G ++ A +
Sbjct: 145 NEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARL 204
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ + K V W++MI+G V G+ ++ + ++ + + D ++ ++ AC+ L
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPF 264
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + +R D + L+D Y K G + A +F M NI++W L+SG
Sbjct: 265 LEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSG 324
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
+ QN L +EL M G +PD + S L +CA + L+ G +H YT++ +
Sbjct: 325 YKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGND 384
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY---GIHGHGEEALSLFLQ 368
+ S+IDMY+KC + AR +FD + D++ +N +I Y G +AL++F
Sbjct: 385 SYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHD 444
Query: 369 MIETMVKPDHSTFASLLSA 387
M +++P TF SLL A
Sbjct: 445 MRFRLIRPSLLTFVSLLRA 463
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 205/432 (47%), Gaps = 39/432 (9%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV- 60
IK NL +I +Y + + ARK+F+ V +N++I YSR + +E+
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELH 436
Query: 61 --LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L +++ M +RP TF L+A SL L + ++I + G D+F GS+++
Sbjct: 437 DALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALI 496
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y C + ++ + F++M+ KDLV W+SM +G V + EA++ + ++ DE
Sbjct: 497 AVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEF 556
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++ A +L + G H ++R L + + +L+DMYAK G + A F +
Sbjct: 557 TFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ ++V W ++IS +A +G L++L +M G EP+ ++ V L AC+ G ++ G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDG- 675
Query: 299 SIHGYTVRRFDFNLVLG--------TSVIDMYSKCGVPSCARALFDQMQSRD-LISWNVI 349
+++F+ L G ++ + + G + AR L ++M ++ I W +
Sbjct: 676 ------LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSL 729
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS-----------------G 392
++ G G L+ + + + P S +LLS + S G
Sbjct: 730 LS--GCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEG 787
Query: 393 LVEE-GRYWFDL 403
+V+E GR W ++
Sbjct: 788 VVKEPGRSWIEI 799
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 17/344 (4%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK--- 166
D ++ + ++NLY + G M A FEKM ++LV WS+M++ +G E++ +
Sbjct: 78 DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137
Query: 167 RMKKEGIDADEVVMMGLIQACADL-GDSRFGL-SVHGYSIRRHLNLDVKVQTSLVDMYAK 224
R +K +E ++ IQAC+ L G R+ + + + ++ + DV V T L+D Y K
Sbjct: 138 RTRKNS--PNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLK 195
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G++D A VF + + VTW +ISG + G + +L+L ++ PD L +
Sbjct: 196 EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTV 255
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L AC+ + FL+ GK IH + +R + + L +ID Y KCG A LFD M ++++
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNI 315
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
ISW +++ Y + +EA+ LF M + +KPD +S+L++ + +E F
Sbjct: 316 ISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALE-----FGT 370
Query: 404 MVSKYKIQPT--EKHYAC--MVDLLARAGEVEEALKIVDSMSTE 443
V Y I+ Y ++D+ A+ + EA K+ D + +
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAAD 414
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 10/263 (3%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VHG I L LD + L+++Y++ G + A VF+ M N+VTW ++S +G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 259 AGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGK----SIHGYTVR-RFDFNL 312
+L + ++ ++ P+ L S + AC+ G G+ + + V+ RFD ++
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACS--GLDGSGRWMVFQLQSFLVKSRFDRDV 183
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+GT +ID Y K G AR +FD + + ++W +I+ G +L LF Q++E
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD +++LSA S +E G+ + +Y + ++D + G V
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQ-IHAHILRYGHEKDASLMNVLIDSYVKCGRVRA 302
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A K+ D M + + W LLSG
Sbjct: 303 AHKLFDGMPNK-NIISWTTLLSG 324
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 300 IHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG V + + L ++++YS+ G AR +F++M R+L++W+ ++++ HG
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 359 GEEALSLFLQMIETMVK-PDHSTFASLLSALSHSGLVEEGRYW-FDLMVSKYKIQPTEKH 416
EE+L +FL T P+ +S + A SGL GR+ F L K +
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQAC--SGLDGSGRWMVFQLQSFLVKSRFDRDV 183
Query: 417 Y--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
Y ++D + G ++ A + D++ E W ++SGC
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGC 224
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L ++ +Y A K F+ R V +NS+I +Y+ +
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKA 640
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + +M+ E + P+ TF L AC ++ G + + + G + M++L
Sbjct: 641 LQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSL 700
Query: 121 YVKCGKMNEAMVAFEKMQRKD-LVCWSSMING 151
+ G++NEA EKM K + W S+++G
Sbjct: 701 LGRAGRLNEARELIEKMPTKPAAIVWRSLLSG 732
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 285/488 (58%), Gaps = 7/488 (1%)
Query: 74 PDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P TF A+K+ L D L G ++ ++++L ++ V +S+LNLY +CG++++A
Sbjct: 72 PSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQK 131
Query: 133 AFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
AF++M Q V W+++I + G+ EA+ + G+ D + ++ ACA +
Sbjct: 132 AFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVA 191
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D G V + + + +V V T+ VD+Y K G +D A VF M ++V WGA++
Sbjct: 192 DLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVG 251
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-- 309
G+A NG LEL MQ G PD ++ AL AC ++G L LG+ + G + ++D
Sbjct: 252 GYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVG--MLQWDEV 309
Query: 310 -FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N VLGT++IDMY+KCG A +F +M++RD+I WN +I G+ GH + A +L Q
Sbjct: 310 LGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQ 369
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M ++ + + +TF LL + +H+GLV++GR +F M Y I+P +HY MVDLL+RAG
Sbjct: 370 MKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAG 429
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++EA +++ M E VW ALL GC H+ + E V K++++L P + G + ++SN
Sbjct: 430 LLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSN 489
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
++ +WE+ A +R M+ G++KVP S VE++G++H F + DKSH + I L +
Sbjct: 490 IYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQIYAKLDE 549
Query: 549 LYLEMRAI 556
L +EM+A+
Sbjct: 550 LGMEMKAM 557
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 194/391 (49%), Gaps = 17/391 (4%)
Query: 16 IIALYGGKNDIVSARKLFEEL--PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
++ LY + A+K F+E+ P V ++ ++I AY E +G+ VR
Sbjct: 116 LLNLYARCGRLHDAQKAFDEMRQPPSTV-SWTALITAYMDAGRGLEAIGVARSAFASGVR 174
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PDS T L AC + DL GEE+W A + G +VFV ++ ++LYVKCG+M++A
Sbjct: 175 PDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGV 234
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+KM+ KD+V W +M+ G NG PREA++ + M+ EG+ D + G + AC LG
Sbjct: 235 FDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGAL 294
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G V G + + + T+L+DMYAK G A VF+ M +I+ W A+I G
Sbjct: 295 DLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGL 354
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS-----IHGYTVR-R 307
G L+ +M+ G + + + L +C G +K G+ Y +R R
Sbjct: 355 GMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPR 414
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLF 366
+ ++ +D+ S+ G+ A L M + + W ++ IH + + A +
Sbjct: 415 IEHYGIM----VDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVL 470
Query: 367 LQMIETMVKPDHSTFASLLSAL-SHSGLVEE 396
Q+I+ ++P +S +LS + S+SG E+
Sbjct: 471 KQLIQ--LEPWNSGNYVVLSNIYSNSGRWED 499
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 298/543 (54%), Gaps = 25/543 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +VSAR +F+++P R V ++ +++ Y R ++ E L L +M V+
Sbjct: 129 LMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLS 188
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND---VFVGSSMLNLYVKCGKMNEAMV 132
+ +L+D+K G + V G++ V + ++++++Y K G + A
Sbjct: 189 GVALISLIAVFGNLLDMKSGRAVHGYIVR-NVGDEKMEVSMTTALIDMYCKGGCLASAQR 247
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ ++ +V W+ MI G + + + E + RM +E + +E+ ++ LI C +G
Sbjct: 248 LFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGT 307
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G H Y +R + + + T+L+DMY K G + A +F + + ++ W LIS
Sbjct: 308 LDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISA 367
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+A L +EM + +P++V++VS L CA+ G L LGK H Y R + +
Sbjct: 368 YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVD 427
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++L T++I+MY+KCG + AR+LF++ RD+ WN ++A + +HG G+EAL LF +M
Sbjct: 428 VILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMES 487
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V+P+ TF S+ A SHSGL+E HY C+VDLL RAG ++
Sbjct: 488 HGVEPNDITFVSIFHACSHSGLME--------------------HYGCLVDLLGRAGHLD 527
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA I+++M P +W ALL+ C HK ++GE A+K+L+L+P + G L SN +A
Sbjct: 528 EAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYA 587
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
++W +V VR+ M SGMKK PG S +EV+G +H F DK+ Q + ++ ++ +
Sbjct: 588 SAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCI 647
Query: 552 EMR 554
++R
Sbjct: 648 KLR 650
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 222/417 (53%), Gaps = 6/417 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP-DSSTFTVALKACVSLMDLKMGEEIWRK 101
YN +I +Y+ P Y M D D+ LKAC +G E+
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
A + G+ +DVFV ++++N+Y KCG + A + F++M +D+V W++M+ V + EA
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR--HLNLDVKVQTSLV 219
+ + M+ G+ V ++ LI +L D + G +VHGY +R ++V + T+L+
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMY K G L A +F +S+ ++V+W +I+G ++ + M P+ +
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L+S + C +G L LGK H Y +R F +L L T++IDMY KCG ARALF+ +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+ +D+ W+V+I++Y ++ +LF++M+ VKP++ T SLLS + +G ++ G+
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
W ++++ ++ ++++ A+ G+V A + + + + + +W +++G
Sbjct: 414 -WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAG 468
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 207/455 (45%), Gaps = 47/455 (10%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SA++LF+ L R V ++ +I R E +N+M++E + P+
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPN 291
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + C + L +G+ + G+G + + ++++++Y KCG++ A F
Sbjct: 292 EITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFN 351
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++KD+ WS +I+ + + + M + + V M+ L+ CA+ G
Sbjct: 352 GVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDL 411
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G H Y R L +DV ++T+L++MYAK G + +A +F + +I W +++GF+
Sbjct: 412 GKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSM 471
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G LEL EM+S G EP+ ++ VS AC+ G ++ +G
Sbjct: 472 HGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEH----YG------------- 514
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGH---GEEALSLFLQMIE 371
++D+ + G A + + M R + I W ++A+ +H + GE A L++
Sbjct: 515 -CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILEL-- 571
Query: 372 TMVKPDHSTFASLLS-----------------ALSHSGLVEE-GRYWFDLMVSKYKIQPT 413
P + ++ L S A+SHSG+ +E G W ++ S + +
Sbjct: 572 ---DPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSG 628
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
+K AC E +K+ +S T AV
Sbjct: 629 DK--ACTQTTKVYEMVTEMCIKLRESGYTPNTAAV 661
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 25/268 (9%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +YG + AR LF + + V ++ +I AY+ +V L+ +M+ DV
Sbjct: 330 VTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDV 389
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+P++ T L C L +G+ G DV + ++++N+Y KCG + A
Sbjct: 390 KPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARS 449
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F + ++D+ W++M+ G +G +EA++ + M+ G++ +++ + + AC
Sbjct: 450 LFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHAC----- 504
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
S GL H LVD+ + GHLD A ++ +NM R N + WGAL++
Sbjct: 505 SHSGLMEH--------------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLA 550
Query: 252 GFAQN-----GLAGSTLELLMEMQSCGF 274
+ G + L ++ Q+CG+
Sbjct: 551 ACKLHKNLALGEVAARKILELDPQNCGY 578
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 307/553 (55%), Gaps = 12/553 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA K+F+ LP R V+ + +++ Y + P L L+ +M++ P
Sbjct: 105 LVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPS 164
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + L AC SL ++ G+++ ++ D +G+S+ + Y K ++ A+ AF+
Sbjct: 165 NYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFK 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ KD++ W+S+I+ NGQ ++ + M +G+ +E + ++ AC +
Sbjct: 225 IIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDL 284
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG--- 252
G +H SI+ + ++ S++ +Y K G L A +F+ M +N+VTW A+I+G
Sbjct: 285 GAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 344
Query: 253 ---FAQNGLA----GST-LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
A++ +A GST L + ++ G +PD + S L C+ + L+ G+ IHG
Sbjct: 345 MMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI 404
Query: 305 VRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ ++V+GT+++ MY+KCG A F +M SR +ISW +I + HG ++AL
Sbjct: 405 IKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQAL 464
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF M +KP+ TF +LSA SH+GL +E Y+F+LM +Y I+P H+AC++D+
Sbjct: 465 QLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDM 524
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
R G VEEA +V M+ EP +W L++GC +H K +G A+++LKL P D+ +
Sbjct: 525 YLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETY 584
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+ N +W++V+ VRK M++ + K+ +S + + ++++F DKSH Q ++
Sbjct: 585 VSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMY 644
Query: 544 YVLKKLYLEMRAI 556
+L+ + E++A+
Sbjct: 645 KLLETVLNEVKAL 657
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 203/403 (50%), Gaps = 14/403 (3%)
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
K R +SS + L+ C+ I V+ G+ D+FV + ++N+Y KCG M
Sbjct: 57 KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVME 116
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F+ + R+++ W++++ G V N P A+ + +M + G + ++ AC+
Sbjct: 117 SAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 176
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L FG VH Y I+ H++ D + SL Y+K L+ A FK + ++++W +
Sbjct: 177 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+IS NG A +L M+M S G +P+ +L S L AC + L LG IH +++
Sbjct: 237 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 296
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY-----------GIH 356
+ ++++ S++ +Y KCG A+ LF+ M++ +L++WN +IA + H
Sbjct: 297 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 356
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G AL++F ++ + +KPD TF+S+LS S+ +E+G ++ +
Sbjct: 357 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 416
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
A +V + + G +++A K M + ++ W ++++G H
Sbjct: 417 TA-LVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARH 457
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 302/575 (52%), Gaps = 39/575 (6%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+ NL ++ N ++ Y I FE+LP R T+N +I YS +
Sbjct: 69 QPNLFSWNN----LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVK 124
Query: 63 LYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
YN M+++ T LK S + +G++I + ++LG+ + + VGS +L +Y
Sbjct: 125 AYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMY 184
Query: 122 -------------------------------VKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
+ CG + +A+ F M+ KD V W++MI
Sbjct: 185 ANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIK 243
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
GL NG +EA++ ++ MK +G+ D+ ++ AC LG G +H IR +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+ V ++L+DMY K L A VF M + N+V+W A++ G+ Q G A +++ ++MQ
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPS 329
G +PD +L A+ ACA + L+ G HG + + V + S++ +Y KCG
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+ LF++M RD +SW ++++Y G E + LF +M++ +KPD T ++SA S
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
+GLVE+G+ +F LM S+Y I P+ HY+CM+DL +R+G +EEA++ ++ M P W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
LLS C N IG+ A+ +++L+P + L+S+ +A + KW+ VA +R+ MR+
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
+KK PG S ++ G+LH+F +D+S + Y D +Y
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDES-SPYLDQIY 637
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 33/298 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+TN + +I +Y + A+ +F+ + + V ++ ++++ Y + E
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ ++ M + + PD T A+ AC ++ L+ G + KA+ G + V V +S++ L
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++++ F +M +D V W++M++ G+ E + + +M + G+ D V +
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
G+I AC SR GL G +R+ K+ TS + GH
Sbjct: 476 TGVISAC-----SRAGLVEKG---QRYF----KLMTSEYGIVPSIGH------------- 510
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ +I F+++G + + M F PD++ + L AC G L++GK
Sbjct: 511 -----YSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGK 560
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 41/249 (16%)
Query: 184 IQACADLG---DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
I+ C LG SR+ +HG IR + + ++V YA A VF + +
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 241 INIVTWGALISGFAQNGLA--------------GSTLELLME------------------ 268
N+ +W L+ +++ GL G T +L+E
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
M+ V+L++ L + G + LGK IHG ++ F+ L++G+ ++ MY+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S A+ +F + R+ + +N ++ G E+AL LF M + D ++A+++
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKG 244
Query: 388 LSHSGLVEE 396
L+ +GL +E
Sbjct: 245 LAQNGLAKE 253
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 302/562 (53%), Gaps = 37/562 (6%)
Query: 25 DIVSARKLFEELPLR---GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
D+ A LFEE V +NS+I YS SP L L+++M+ V+P+S TF
Sbjct: 77 DLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPF 136
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK----- 136
K+C G+++ A++L + V +S++++Y G+M+ A + F+K
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRD 196
Query: 137 --------------------------MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
+ KD+V W++MI+G V +G+ EA+ + M++
Sbjct: 197 AVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE 256
Query: 171 EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
+ ++ M+ ++ AC G + + ++++ +L+DMY K G D+
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI 316
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A +F + ++++W +I G++ L L L M +P+ V+ + L ACA
Sbjct: 317 ARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACAC 376
Query: 291 IGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+G L LGK +H Y + R N L TS+IDMY+KCG A +F M SR+L SWN
Sbjct: 377 LGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNA 436
Query: 349 IIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+++ + +HGH E AL+LF +M+ + +PD TF +LSA + +GLV+ G +F M+
Sbjct: 437 MLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQD 496
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
Y I P +HY CM+DLLARA + EEA ++ +M EP A+W +LLS C H + GE
Sbjct: 497 YGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEY 556
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELH 527
VA+++ +L P++ G L+SN +A +W++VA +R + GMKKVPG + +E++G++H
Sbjct: 557 VAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVH 616
Query: 528 AFIMEDKSHNQYEDIVYVLKKL 549
F++ DK H + +I +L ++
Sbjct: 617 EFLVGDKFHPECNNIYKMLNEV 638
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 218/429 (50%), Gaps = 40/429 (9%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y + + AR+LF+E+P++ V ++N++I Y + E + + +M + +
Sbjct: 199 SFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEAN 258
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
V P+ ST V L AC ++G+ I + G+G+++ + ++++++Y KCG+ + A
Sbjct: 259 VLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAR 318
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ ++ KD++ W++MI G + EA+ ++ M + + ++V +G++ ACA LG
Sbjct: 319 ELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLG 378
Query: 192 DSRFGLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G VH Y I ++L + + + TSL+DMYAK G ++ A VF++M N+ +W A+
Sbjct: 379 ALDLGKWVHAY-IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAM 437
Query: 250 ISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+SGFA +G A L L EM + G F PD ++ V L AC Q G + LG ++ +
Sbjct: 438 LSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDY 497
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
G S + C + ARA ++ + +++
Sbjct: 498 ------GISPKLQHYGCMIDLLARA--EKFEEAEIL------------------------ 525
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARA 427
M ++PD + + SLLSA G VE G Y + + ++++P + + ++ A A
Sbjct: 526 MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERL---FQLEPENAGAFVLLSNIYAGA 582
Query: 428 GEVEEALKI 436
G ++ +I
Sbjct: 583 GRWDDVARI 591
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 289/543 (53%), Gaps = 5/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y K + AR LF+E+P R V + ++I Y+ +++M+K+ P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG-KMNEAMVAF 134
T + LK+C ++ L G + V+LG ++V ++M+N+Y C M A + F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ K+ V W+++I G G + YK+M E + + ++A A +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVT 230
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H I+R ++ V S++D+Y + G+L A H F M +++TW LIS
Sbjct: 231 TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++ + L + +S GF P+ + S + ACA I L G+ +HG RR F+ N+
Sbjct: 291 RSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349
Query: 314 LGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY+KCG +P R + + R+L+SW ++ YG HG+G EA+ LF +M+ +
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++PD F ++LSA H+GLVE+G +F++M S+Y I P Y C+VDLL RAG++ E
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFS-IGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A ++V+ M +P + W A+L C HK I A+KV++L P +G + ++S +A
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYA 529
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
E KW + A VRK MR G KK G S + V ++ +F + DK + VL L
Sbjct: 530 AEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIE 589
Query: 552 EMR 554
E R
Sbjct: 590 ETR 592
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ ++++ Y + G + EA F++M +D+V W++MI G + A + + M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG-HLDLA 231
+E + ++++C ++ +G VHG ++ + + V ++++MYA ++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 232 SHVFKNMSRINIVTWGALISGFAQ--NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+F+++ N VTW LI+GF +G+ G + M +++ P +++ A+ A A
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASA 224
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
I + GK IH ++R F NL + S++D+Y +CG S A+ F +M+ +DLI+WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I+ EAL +F + P+ TF SL++A ++ + G+ + +
Sbjct: 285 LISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ E A ++D+ A+ G + ++ ++ + L W +++ G +H + ++
Sbjct: 344 FNKNVELANA-LIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 469 AKKVLK--LNPDDLGIHALVS 487
K++ + PD + A++S
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLS 423
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L T++I Y + G+ AR+LFD+M RD+++W +I Y + A F +M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 373 MVKPDHSTFASLL-----------SALSHSGLVE---EGRYWFD-LMVSKYKIQPTEKHY 417
P+ T +S+L AL H +V+ EG + D M++ Y
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 418 ACMV 421
AC++
Sbjct: 166 ACLI 169
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 293/557 (52%), Gaps = 33/557 (5%)
Query: 30 RKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACVS 88
+++F+ +P V ++NS++ Y+ E + +YN M+K+ V + TF+ L +
Sbjct: 91 QRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSN 150
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK------------ 136
+ +G +I + + GY + +FVGS ++++Y K G +N+A FE+
Sbjct: 151 RGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTM 210
Query: 137 -------------------MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
M KD + W+++I GL NG +EAVD +K M EG D+
Sbjct: 211 ITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQ 270
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ AC G +H Y IR ++ V ++L+DMY K ++ A VF+
Sbjct: 271 FTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRK 330
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M N+++W A++ G+ QNG + + + +MQ PD +L S + +CA + L+ G
Sbjct: 331 MRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG 390
Query: 298 KSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
HG + V + ++I +Y KCG A LF +M+ RD +SW +++ Y
Sbjct: 391 AQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQF 450
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G E +SLF M+ + PD TF +LSA S +GLVE+G ++F+ MV +++I P H
Sbjct: 451 GKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDH 510
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y CM+DLL+RAG +EEA ++ M P W LLS C + IG+ A+ + KL
Sbjct: 511 YTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE 570
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + + L+S+ +A + KW++VA +RK MR+ G+KK PG+S ++ ++H F +D+S
Sbjct: 571 PQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSS 630
Query: 537 NQYEDIVYVLKKLYLEM 553
+ I L+ LYL+M
Sbjct: 631 PFSDQIYAKLESLYLKM 647
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 172/338 (50%), Gaps = 3/338 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
IV A +LF+ +P + ++ +II ++ E + + +M E D TF L A
Sbjct: 220 IVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTA 279
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C + L G++I + Y +++FVGS++L++Y KC + A F KM+ K+++ W
Sbjct: 280 CGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISW 339
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++M+ G NG EAV + M++ I D+ + +I +CA+L G HG ++
Sbjct: 340 TAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALA 399
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L V V +L+ +Y K G L+ A +F M + V+W AL+SG+AQ G A T+ L
Sbjct: 400 SGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISL 459
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYS 323
M + G PD V+ V L AC++ G ++ G V+ + T +ID+ S
Sbjct: 460 FETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLS 519
Query: 324 KCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+ G A+ +QM S D I W +++S ++G+ E
Sbjct: 520 RAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLE 557
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 206/432 (47%), Gaps = 43/432 (9%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+V L+ ++I+ P++ + + L DLK ++ + ++F +++L
Sbjct: 23 QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ----PNLFSWNTLL 78
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADE 177
+ Y K G + + F+ M D+V W+S+++G NG E+V Y M K+G ++ +
Sbjct: 79 SAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNR 138
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ ++ ++ G G +HG + + V + LVDMYAKTG ++ A+ +F+
Sbjct: 139 ITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEE 198
Query: 238 MSRINIV-------------------------------TWGALISGFAQNGLAGSTLELL 266
+ NIV +W +I+G QNGL ++
Sbjct: 199 IPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKF 258
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKL--GKSIHGYTVRR-FDFNLVLGTSVIDMYS 323
EM GF D + S L AC GFL L GK IH Y +R + N+ +G++++DMY
Sbjct: 259 KEMGIEGFCMDQFTFGSVLTACG--GFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYC 316
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KC A A+F +M+ +++ISW ++ YG +G+ EEA+ +F M + PD T S
Sbjct: 317 KCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGS 376
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
++S+ ++ +EEG + ++ I A ++ L + G +E A ++ M
Sbjct: 377 VISSCANLASLEEGAQFHGQALASGLICFVTVSNA-LITLYGKCGSLEHAHQLFHEMKIR 435
Query: 444 PGLAVWVALLSG 455
++ W AL+SG
Sbjct: 436 DEVS-WTALVSG 446
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 120/249 (48%), Gaps = 12/249 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ A +F ++ + V ++ ++++ Y + E + ++ M + ++ PD
Sbjct: 311 LLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPD 370
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +C +L L+ G + +A+ G V V ++++ LY KCG + A F
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+ +D V W+++++G G+ E + ++ M GI D V +G++ AC SR
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSAC-----SRA 485
Query: 196 GLSVHGYS-----IRRHLNLDVKVQ-TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
GL GY ++ H + T ++D+ ++ G L+ A + M + + W
Sbjct: 486 GLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWAT 545
Query: 249 LISGFAQNG 257
L+S NG
Sbjct: 546 LLSSCRLNG 554
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+AL C + K +H +R + L ++I+ Y K G AR +FD +
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+L SWN ++++Y G+ ++ +F ++M D ++ SLLS + +GL+ E
Sbjct: 69 PNLFSWNTLLSAYSKLGYLQDMQRVF----DSMPNHDVVSWNSLLSGYAGNGLISESVRV 124
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+++M+ + ++ M+ L + G V+ +I
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQI 160
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 317/608 (52%), Gaps = 67/608 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ Y + D+ S + F++LP R ++ ++I+ Y + + + M+KE + P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG---------- 125
T T L + + ++ G+++ V+LG +V V +S+LN+Y KCG
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 126 ---------------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+M+ AM FE+M +D+V W+SMI+G G A+D
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 165 YKRMKKEGI-DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL------------- 210
+ +M ++ + D + ++ ACA+L G +H + + ++
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 211 ------------------DVKVQ--TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D+K++ T+L+D Y K G ++ A ++F ++ ++V W A+I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD- 309
G+ Q+G G + L M G P+S +L + L + + L GK IHG V+ +
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ + ++I MY+K G + A FD ++ RD +SW +I + HGH EEAL LF
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ ++PDH T+ + SA +H+GLV +GR +FD+M KI PT HYACMVDL RAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++EA + ++ M EP + W +LLS C HK +G+ A+++L L P++ G ++ ++N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
++ KWEE A +RK+M+ +KK G+S +EV ++H F +ED +H + +I +KK
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 549 LYLEMRAI 556
++ E++ +
Sbjct: 686 IWDEIKKM 693
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 181/414 (43%), Gaps = 67/414 (16%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F +++L+ Y K G M+ F+++ ++D V W++MI G GQ +A+ M KE
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------- 224
GI+ + + ++ + A G VH + ++ L +V V SL++MYAK
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 225 ------------------------TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G +DLA F+ M+ +IVTW ++ISGF Q G
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 261 STLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L++ +M + PD +L S L ACA + L +GK IH + V FD + ++ ++
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 319 IDMYSKCGVPSCARALFDQ---------------------------------MQSRDLIS 345
I MYS+CG AR L +Q ++ RD+++
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I Y HG EA++LF M+ +P+ T A++LS S + G+ V
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+I A ++ + A+AG + A + D + E W +++ H
Sbjct: 441 KSGEIYSVSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 73/373 (19%)
Query: 183 LIQACADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+Q + + RF VH I+ L V + +L+++Y+KTG+ A +F M
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 242 NIVTWGALISGFAQNGLAGSTLE-------------------------------LLMEMQ 270
+W ++S +++ G ST E ++ +M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G EP +L + L + A ++ GK +H + V+ N+ + S+++MY+KCG P
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A+ +FD+M RD+ SWN +IA + G + A++ F QM E D T+ S++S +
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFN 254
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
G +DL +D+ ++ + DS+ + P
Sbjct: 255 QRG--------YDLRA---------------LDIFSKM--------LRDSLLS-PDRFTL 282
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
++LS C N +K IG+++ ++ D GI +++ +M + V R+ + +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGI--VLNALISMYSRCGGVETARRLIEQR 340
Query: 510 GMK--KVPGYSVV 520
G K K+ G++ +
Sbjct: 341 GTKDLKIEGFTAL 353
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 300/538 (55%), Gaps = 10/538 (1%)
Query: 23 KNDIVSARKLFE--ELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFT 80
K D+ S R+L++ E +D N + + + K + VL L + + PD + +
Sbjct: 23 KRDLGSFRRLWQHSESTFCVIDDRNLLRPSLNSK-TGLHVLDLIDC---GSLEPDRTLYN 78
Query: 81 VALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
LK C L LK G+ + + + +D+ + +S+L +Y +CG + A F++M +
Sbjct: 79 TLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHR 138
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D+V W+SMI G N + +A+ + RM +G + +E + L++ C + G +H
Sbjct: 139 DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIH 198
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+ + +V V +SLVDMYA+ G+L A VF + N V+W ALI+G+A+ G
Sbjct: 199 ACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGE 258
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV--LGTSV 318
L L + MQ G+ P + + L +C+ +G L+ GK +H + ++ LV +G ++
Sbjct: 259 EALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ-KLVGYVGNTL 317
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+ MY+K G A +FD++ D++S N ++ Y HG G+EA F +MI ++P+
Sbjct: 318 LHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPND 377
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
TF S+L+A SH+ L++EG+++F LM KY I+P HYA +VDLL RAG +++A ++
Sbjct: 378 ITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIE 436
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
M EP +A+W ALL HK +G A++V +L+P G H L++N +A +WE+
Sbjct: 437 EMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWED 496
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
VA VRK M+ SG+KK P S VEV +H F+ D +H Q E I + +KL +++ I
Sbjct: 497 VAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEI 554
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 187/348 (53%), Gaps = 4/348 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR+LF+E+P R + ++ S+I Y++ + + L L+ +M+ + P+
Sbjct: 115 LLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +K C + G +I + G ++VFVGSS++++Y +CG + EAM+ F+
Sbjct: 175 EFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFD 234
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ K+ V W+++I G G+ EA+ + RM++EG E L+ +C+ +G
Sbjct: 235 KLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQ 294
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ L V +L+ MYAK+G + A VF + ++++V+ +++ G+AQ
Sbjct: 295 GKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQ 354
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+GL + EM G EP+ ++ +S L AC+ L GK G +R+++ +
Sbjct: 355 HGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFG-LMRKYNIEPKVS 413
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
+++D+ + G+ A++ ++M ++ W ++ + +H + E
Sbjct: 414 HYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTE 461
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K++ G ++ +Y I A K+F++L V + NS++I Y++ E
Sbjct: 302 LMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEA 361
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+++MI+ + P+ TF L AC L G+ + + V +++++L
Sbjct: 362 AQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDL 421
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVC-WSSMI 149
+ G +++A E+M + V W +++
Sbjct: 422 LGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 285/543 (52%), Gaps = 3/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA+ L P R V T+ ++I + L ++ M ++ ++P+
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF A KA SL +G+++ AV+ G +DVFVG S ++Y K G EA F+
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +++ W++ ++ V G+ +A+ A+ + EG + + + + ACA R
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRL 227
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+ ++ DV V L+D Y K + + +F +S+ N V+W ++I + Q
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQ 287
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVL 314
N + + + G EP + S L ACA + L++GKS+H V+ N+ +
Sbjct: 288 NDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFV 347
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI--ET 372
G++++DMY KCG A FD+M R+L++WN +I Y G + A++LF +M
Sbjct: 348 GSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 407
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V P++ TF +LSA S +G V G F+ M +Y I+P +HYAC+VDLL RAG VE+
Sbjct: 408 RVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ 467
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M P ++VW ALL K +G+ A + +L+P D G H L+SN FA
Sbjct: 468 AYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAA 527
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+WEE VRK M+ G+KK G S + +H F +D SH + +I +L KL E
Sbjct: 528 AGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGE 587
Query: 553 MRA 555
M A
Sbjct: 588 MEA 590
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 168/345 (48%), Gaps = 3/345 (0%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ + ++N+Y K + N A + + +V W+++I G V NG+ A+ + M+++
Sbjct: 43 FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
I ++ +A L G VH +++ DV V S DMY+K G + A
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI 291
+F M NI TW A +S G L +E + G+EP+ ++ + L ACA
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGA 222
Query: 292 GFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
+L+LG+ +HG+ ++ F+ ++ + +ID Y KC C+ +F + + +SW +I
Sbjct: 223 SYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMI 282
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKI 410
SY + E+A +FL+ + ++P +S+LSA + ++E G+ L V +
Sbjct: 283 VSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 342
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A +VD+ + G +E+A + D M E L W A++ G
Sbjct: 343 GNIFVGSA-LVDMYGKCGSIEDAERAFDEM-PERNLVTWNAMIGG 385
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 284/496 (57%), Gaps = 7/496 (1%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
Q++ + P TF + + +C+ L G ++ + V G D ++ + ++N+Y G
Sbjct: 64 QLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLG 123
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
++ A F++ + K + W+++ L + + + Y +M GI ++ +++
Sbjct: 124 SVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLK 183
Query: 186 ACA----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
AC + R G +H + +R V V T+L+D+YA+ G++ AS VF M
Sbjct: 184 ACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDK 243
Query: 242 NIVTWGALISGFAQNGLAGSTLEL--LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
NIV+W A+I+ +A+N + LEL +M +++C P+ +++VS L ACA + L+ GK
Sbjct: 244 NIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKL 303
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H Y +RR D L + ++I MY +CG S + +FD M+ RD+ISWN +I+ YG+HG
Sbjct: 304 VHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGL 363
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G++A+ +F MI V P + TF ++L A SH+GLVEE + F+ M++KY+I P +HYA
Sbjct: 364 GKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYA 423
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVD+L RA ++EA++++ +M +PG VW +LL C H + E+ + + +L P
Sbjct: 424 CMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPK 483
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L+S+ +A + W +V VRK + G++K+P S +EV ++++ + ++ + Q
Sbjct: 484 NAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQ 543
Query: 539 YEDIVYVLKKLYLEMR 554
E++ L L E++
Sbjct: 544 IEELCAFLITLLTEIK 559
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 150/290 (51%), Gaps = 6/290 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y + A K+F+E + + +N+I A + ++L LY QM +
Sbjct: 114 KLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPS 173
Query: 75 DSSTFTVALKACV----SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ T+T LKACV S+ L+ G+EI + GY V V +++L++Y + G ++ A
Sbjct: 174 NRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYA 233
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F M K++V WS+MI N P +A++ ++ M E D + + M+ ++QACA
Sbjct: 234 SSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACA 293
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G VH Y +RR L+ + V +L+ MY + G + VF M + ++++W +
Sbjct: 294 SLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNS 353
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
LIS + +GL +++ M + G P ++ ++ L AC+ G ++ K
Sbjct: 354 LISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 307/553 (55%), Gaps = 12/553 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA K+F+ LP R V+ + +++ Y + P L L+ +M++ P
Sbjct: 99 LVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPS 158
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + L AC SL ++ G+++ ++ D +G+S+ + Y K ++ A+ AF+
Sbjct: 159 NYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFK 218
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ KD++ W+S+I+ NGQ ++ + M +G+ +E + ++ AC +
Sbjct: 219 IIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDL 278
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG--- 252
G +H SI+ + ++ S++ +Y K G L A +F+ M +N+VTW A+I+G
Sbjct: 279 GAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 338
Query: 253 ---FAQNGLA----GST-LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
A++ +A GST L + ++ G +PD + S L C+ + L+ G+ IHG
Sbjct: 339 MMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI 398
Query: 305 VRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ ++V+GT+++ MY+KCG A F +M SR +ISW +I + HG ++AL
Sbjct: 399 IKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQAL 458
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF M +KP+ TF +LSA SH+GL +E Y+F+LM +Y I+P H+AC++D+
Sbjct: 459 QLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDM 518
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
R G VEEA +V M+ EP +W L++GC +H K +G A+++LKL P D+ +
Sbjct: 519 YLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETY 578
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+ N +W++V+ VRK M++ + K+ +S + + ++++F DKSH Q ++
Sbjct: 579 VSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMY 638
Query: 544 YVLKKLYLEMRAI 556
+L+ + E++A+
Sbjct: 639 KLLETVLNEVKAL 651
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 203/403 (50%), Gaps = 14/403 (3%)
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
K R +SS + L+ C+ I V+ G+ D+FV + ++N+Y KCG M
Sbjct: 51 KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVME 110
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F+ + R+++ W++++ G V N P A+ + +M + G + ++ AC+
Sbjct: 111 SAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 170
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L FG VH Y I+ H++ D + SL Y+K L+ A FK + ++++W +
Sbjct: 171 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 230
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+IS NG A +L M+M S G +P+ +L S L AC + L LG IH +++
Sbjct: 231 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 290
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY-----------GIH 356
+ ++++ S++ +Y KCG A+ LF+ M++ +L++WN +IA + H
Sbjct: 291 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 350
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G AL++F ++ + +KPD TF+S+LS S+ +E+G ++ +
Sbjct: 351 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 410
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
A +V + + G +++A K M + ++ W ++++G H
Sbjct: 411 TA-LVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARH 451
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 296/541 (54%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + SAR +FE + + + + I+ Y + L L ++M + P+
Sbjct: 187 LINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPN 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF ALKA + L + + + ++ Y D VG +L LY + G M++A F
Sbjct: 247 NYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + D+V WS MI NG +AVD + RM++ + +E + ++ CA S
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++ +LDV V +L+D+YAK +D A +F +S N+V+W +I G+
Sbjct: 367 GEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYEN 426
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-L 314
G G L + E V+ SAL ACA + ++LG +HG ++ + V +
Sbjct: 427 LGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAV 486
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY+KCG A+ +F++M++ D+ SWN +I+ Y HG G +AL +F M +
Sbjct: 487 SNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDC 546
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF +LS S++GL+++G+ F+ M+ + I+P +HY CMV L R+G++++A+
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAM 606
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++ + EP + +W A+LS N + A+++LK+NP D + L+SN +A +
Sbjct: 607 NLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAK 666
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W VA +RK+M++ G+KK PG S +E G++H F + H + I +L+ +L M+
Sbjct: 667 QWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLE--WLNMK 724
Query: 555 A 555
A
Sbjct: 725 A 725
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 220/432 (50%), Gaps = 7/432 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+E+P R +Y ++ Y+ ++ +GLY+++ +E + FT LK VS
Sbjct: 103 ALNLFDEMPERNNVSYVTLTQGYACQDP----VGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L ++ + V+LGY ++ FVG++++N Y CG ++ A FE + KD+V W+ +
Sbjct: 159 LDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGI 218
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++ V NG +++ RM +G + ++A LG F SVHG ++
Sbjct: 219 VSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCY 278
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
LD +V L+ +Y + G + A VF M + ++V W +I+ F QNG +++ +
Sbjct: 279 ELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIR 338
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
M+ P+ +L S L CA LG+ +HG V+ FD ++ + ++ID+Y+KC
Sbjct: 339 MREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEK 398
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A LF ++ S++++SWN +I Y G G +AL++F + + V TF+S L A
Sbjct: 399 MDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGA 458
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ +E G L + + + ++D+ A+ G+++ A + + M T +A
Sbjct: 459 CASLASMELGVQVHGLAIKTNNAKRVAVSNS-LIDMYAKCGDIKVAQTVFNEMET-IDVA 516
Query: 448 VWVALLSGCHNH 459
W AL+SG H
Sbjct: 517 SWNALISGYSTH 528
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 191/388 (49%), Gaps = 13/388 (3%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS + L+ C+ D + I ++ G D+F + +LN YVK G +A+ F
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M ++ V + ++ G ++ V Y R+ +EG + + V ++ L +
Sbjct: 108 DEMPERNNVSYVTLTQGYAC----QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H ++ + + V +L++ Y+ G +D A VF+ + +IV W ++S +
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYV 223
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+NG +L+LL M GF P++ + +AL A +G KS+HG ++ ++ +
Sbjct: 224 ENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR 283
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++ +Y++ G S A +F++M D++ W+ +IA + +G +A+ +F++M E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGF 343
Query: 374 VKPDHSTFASLLSALS---HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
V P+ T +S+L+ + SGL E+ +V K ++D+ A+ ++
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQ----LHGLVVKVGFDLDVYVSNALIDVYAKCEKM 399
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHN 458
+ A+K+ +S++ + W ++ G N
Sbjct: 400 DTAVKLFAELSSK-NVVSWNTVIVGYEN 426
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IKTN + +I +Y DI A+ +F E+ V ++N++I YS + L
Sbjct: 476 IKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQAL 535
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNL 120
+++ M D +P+ TF L C + + G++ + + + G + + M+ L
Sbjct: 536 RIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRL 595
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+ + G++++AM E + ++ W +M++
Sbjct: 596 FGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 306/574 (53%), Gaps = 42/574 (7%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I NL + +++ Y + R +F+E+ + V +N +I +Y +
Sbjct: 62 LIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDA 121
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ M + PD+ T+ LKAC +L +G +I V+LG ++++G+ ++++
Sbjct: 122 LLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSM 181
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC ++ A ++M +D+V W+SM+ G NG+ +A+ + M+ + D M
Sbjct: 182 YGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTM 241
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+ A + L VK DM+ K +
Sbjct: 242 GSLLPAVTNTSCDNV--------------LYVK------DMFVK-------------LKE 268
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++++W +I+ + N + ++L ++MQ G EPD+VS+ S L AC + LG+ I
Sbjct: 269 KSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRI 328
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y R+ NL+L ++IDMY+KCG ARA+FDQM RD++SW +I++YG+ G G
Sbjct: 329 HEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQG 388
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++A++LF +M ++ PD F S+L+A SH+GLV+EGRY F+LM ++Y I P +HY C
Sbjct: 389 KDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM-AEYGITPGIEHYNC 447
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG+++EA + M EP VW +LLS C + +I A + +L P+
Sbjct: 448 MVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQ 507
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
G + L+SN +A +W++V VR M G+KK+PG S VE+N ++ F+ D+SH Q
Sbjct: 508 SGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQS 567
Query: 540 EDIVYVLKKLYLEMRAISSWLQGHMEEHEE--HD 571
++I L L M+ + G+M E + HD
Sbjct: 568 KEIYKALGVLVGRMKEL-----GYMPETDSALHD 596
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 290/537 (54%), Gaps = 3/537 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y DI A +FE++P V ++N+ I L L QM + P+
Sbjct: 246 LVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPN 305
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + LKAC +G +I V+ D FV ++++Y K G +++A F+
Sbjct: 306 VFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFD 365
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD--EVVMMGLIQACADLGDS 193
M R+DL+ W+++I+G +G+ E + + RM+KEG+D D + ++++ A
Sbjct: 366 FMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAI 425
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
VH + + L D V L+D Y K G LD A VFK +I++ +++
Sbjct: 426 CHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTAL 485
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+Q ++L ++M G EPDS L S L AC + + GK +H + ++R F ++
Sbjct: 486 SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDV 545
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
G +++ Y+KCG A F + R ++SW+ +I HGHG+ AL LF +M++
Sbjct: 546 FAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDE 605
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V P+H T S+LSA +H+GLV++ + +F+ M + I TE+HYACM+D+L RAG++E+
Sbjct: 606 GVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLED 665
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+++V++M + AVW ALL H+ +G A+K+ L P+ G H L++N +A
Sbjct: 666 AMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYAS 725
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W+E+A VRK M+ S +KK P S VE+ ++H FI+ DKSH DI L +L
Sbjct: 726 AGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAEL 782
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 233/455 (51%), Gaps = 17/455 (3%)
Query: 16 IIALYGGKNDIVSARKLFEEL----PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
++A+YGG + AR++F+E R ++N++I AY + + + +G++ +M+
Sbjct: 141 LVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSG 200
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP+ F+ + AC DL+ G ++ V GY DVF ++++++Y K G + A
Sbjct: 201 ERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAA 260
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FEKM D+V W++ I+G V +G A++ +MK G+ + + +++ACA G
Sbjct: 261 TVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAG 320
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HG+ ++ + D V LVDMYAK G LD A VF M R +++ W ALIS
Sbjct: 321 AFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALIS 380
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPD--SVSLVSALLACAQIGFLKLGKSIHGYTVR--- 306
G + +G G L L M+ G + D +L S L + A + + +H +
Sbjct: 381 GCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGL 440
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
D +++ G +ID Y KCG A +F + +S D+IS ++ + HGE+A+ LF
Sbjct: 441 LSDSHVING--LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLF 498
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLL 424
+QM+ ++PD +SLL+A + E+G+ ++ K Q T +A +V
Sbjct: 499 VQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLI---KRQFTSDVFAGNALVYAY 555
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
A+ G +E+A + S E G+ W A++ G H
Sbjct: 556 AKCGSIEDA-DMAFSGLPERGIVSWSAMIGGLAQH 589
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 244/509 (47%), Gaps = 46/509 (9%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN 65
L+ + N ++ LY +AR +F+E+P +++S++ AYS P + L +
Sbjct: 36 LAGFSN---HLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFR 92
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
M V + V LK C D++ G ++ AV +DVFV ++++ +Y G
Sbjct: 93 AMRGRGVPCNEFALPVVLK-CAP--DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFG 149
Query: 126 KMNEAMVAFEKM----QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
++EA F++ ++ V W++MI+ V N Q +A+ ++ M G +E
Sbjct: 150 MVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFS 209
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ AC D G VHG +R DV +LVDMY+K G +++A+ VF+ M
Sbjct: 210 CVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAA 269
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W A ISG +G LELL++M+S G P+ +L S L ACA G LG+ IH
Sbjct: 270 DVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIH 329
Query: 302 GYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
G+ V+ DF+ + ++DMY+K G AR +FD M RDLI WN +I+ G
Sbjct: 330 GFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 389
Query: 361 EALSLFLQMIETMVKPD--HSTFASLLSALSHS----------------GLVEEGR---- 398
E LSLF +M + + D +T AS+L + + S GL+ +
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING 449
Query: 399 ----YW----FDLMVSKYKIQPTEK--HYACMVDLLARAGEVEEALKIVDSM---STEPG 445
YW D + +K ++ M+ L++ E+A+K+ M EP
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
V +LL+ C + + G++V ++K
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIK 538
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 284/531 (53%), Gaps = 3/531 (0%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SAR + P R V ++ S+I ++ L + +M +E V P+ TF A KA
Sbjct: 10 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 69
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
SL G++I AV+ G DVFVG S ++Y K ++A F+++ ++L W++
Sbjct: 70 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 129
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I+ V +G+PREA++A+ ++ + + + AC+D G+ +HG +R
Sbjct: 130 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 189
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ DV V L+D Y K + + +F M N V+W +L++ + QN L +
Sbjct: 190 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 249
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
+ E + S L ACA + L+LG+SIH + V+ + + +G++++DMY KCG
Sbjct: 250 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 309
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV--KPDHSTFASL 384
+ FD+M ++L++ N +I Y G + AL+LF +M P++ TF SL
Sbjct: 310 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 369
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA S +G VE G FD M S Y I+P +HY+C+VD+L RAG VE A + + M +P
Sbjct: 370 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 429
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
++VW AL + C H K +G A+ + KL+P D G H L+SN FA +W E VR+
Sbjct: 430 TISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVRE 489
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
++ G+KK GYS + V ++HAF +D+SH ++I L KL EM A
Sbjct: 490 ELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 540
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 162/337 (48%), Gaps = 3/337 (0%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K A + +++V W+S+I+GL NG A+ + M++EG+ ++
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+A A L G +H +++ LDV V S DMY KT D A +F +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+ TW A IS +G +E +E + P+S++ + L AC+ L LG
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG +R FD ++ + +ID Y KC + +F +M +++ +SW ++A+Y +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
E+A L+L+ + +V+ +S+LSA + +E GR V K ++ T +
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFVGS 299
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ + G +E++ + D M E L +L+ G
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGG 335
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 6/247 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I YG I S+ +F E+ + ++ S++ AY + + LY + K+ V
Sbjct: 200 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 259
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC + L++G I AV+ +FVGS+++++Y KCG + ++ AF+
Sbjct: 260 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 319
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI--DADEVVMMGLIQACADLGDS 193
+M K+LV +S+I G GQ A+ ++ M G + + + L+ AC+ G
Sbjct: 320 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 379
Query: 194 RFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G+ + S+R ++ + + +VDM + G ++ A K M + I WGAL
Sbjct: 380 ENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 438
Query: 251 SGFAQNG 257
+ +G
Sbjct: 439 NACRMHG 445
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 294/514 (57%), Gaps = 6/514 (1%)
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKEDVRP---DSSTFTVALKACVSLMDLKMGEEIWRK 101
N+ +I +SR+ + L + + V P +S + AL+ C+ + G+ + +
Sbjct: 5 NNFLIQFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
++ G D+F + +LN+YVK + +A F++M ++ + + ++I G + + EA
Sbjct: 64 ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
++ + R+ +E + ++ ++QACA + G +H + I+ L+ DV V +L+D+
Sbjct: 124 IELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDV 182
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
YAK G ++ + +F N VTW +I G Q G L L + M + V+
Sbjct: 183 YAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTY 242
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
SAL ACA + L+ G IH TV+ FD ++V+ ++IDMY+KCG AR +FD M
Sbjct: 243 SSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNK 302
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+D +SWN +I+ Y +HG G EAL +F +M ET VKPD TF +LSA +++GL+++G+ +
Sbjct: 303 QDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAY 362
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F M+ + I+P +HY CMV LL R G +++A+K++D + +P + VW ALL C H
Sbjct: 363 FTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHN 422
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+G A++VL++ P D H L+SN +A ++W+ VA VRK M++ G+KK PG S +
Sbjct: 423 DIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWI 482
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
E G +H+F + D SH + I +L+ L+++ +
Sbjct: 483 ESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTK 516
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 159/284 (55%), Gaps = 1/284 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + + A KLF+E+P R ++ ++I Y+ E + L+ ++ +E V P+
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPN 137
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L+AC ++ L +G +I +++G +DVFV ++++++Y KCG+M +M F
Sbjct: 138 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA 197
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++ V W+++I G V G +A+ + M + + A EV ++ACA L
Sbjct: 198 ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEP 257
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL +H +++ + D+ V +L+DMYAK G + A VF M++ + V+W A+ISG++
Sbjct: 258 GLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSM 317
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+GL L + +MQ +PD ++ V L ACA G L G++
Sbjct: 318 HGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQA 361
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 132/237 (55%), Gaps = 2/237 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ++ +LF E P R T+N++I+ + + + L L+ M++ V+
Sbjct: 179 LMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQAT 238
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T++ AL+AC SL L+ G +I V+ + D+ V ++++++Y KCG + +A + F+
Sbjct: 239 EVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFD 298
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D V W++MI+G +G REA+ + +M++ + D++ +G++ ACA+ G
Sbjct: 299 LMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQ 358
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G + I+ H + ++ T +V + + GHLD A + + + +++ W AL+
Sbjct: 359 GQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 301/536 (56%), Gaps = 5/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y AR++F+E+ + + +++++I Y + P + LY+QM + P+
Sbjct: 44 VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPN 100
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F + AC SL + +G++I ++++ GY + FV +S++++Y+KC + ++A+ F
Sbjct: 101 EYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFT 160
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V ++++I G V N Q ++ +K M+++G+ D MG++ C + +
Sbjct: 161 NTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKR 220
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +++ +L+ + ++ MY++ + A F+ + ++++W LI+ +
Sbjct: 221 GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSH 280
Query: 256 NGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
L + M + PD + SAL ACA + + GK IH + +R R +L
Sbjct: 281 CDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLG 340
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++++MY+KCG A +F +M +L+SWN IIA +G HG GE A+ LF QM +
Sbjct: 341 VGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASG 400
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD TF LL+A +H+GLV++G+ +F+ M Y I P +H++C++D+L RAG + EA
Sbjct: 401 IRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + V V+LLS H IGE++AK +LKL P + L+SN +A +
Sbjct: 461 EEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASD 520
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W+ VA RK ++ SG+KK PG+S++EVNG + F + D +H + ++I +LK L
Sbjct: 521 GMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 193/419 (46%), Gaps = 15/419 (3%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + L C L+ G + ++ G +DVF+ + +LN+Y KCG A F+
Sbjct: 3 TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFD 62
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K+LV WS+MI+G G+P+ A+D Y +M + +E V +I ACA L
Sbjct: 63 EMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTL 119
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H S++ V SL+ MY K A VF N N V++ ALI+GF +
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N LE M+ G PD + + L C LK G +H TV+ D +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETM 373
G +I MYS+ + A F ++ +D+ISWN +IA+ + L +F M ET
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+PD TF S L+A + + G+ ++ Q A +V++ A+ G + A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNA-LVNMYAKCGCIGYA 358
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN-----PDDLGIHALVS 487
I M L W +++G NH +GE+ + ++N PD + L++
Sbjct: 359 YDIFSKM-VHHNLVSWNTIIAGFGNH---GLGERAVELFEQMNASGIRPDSVTFIGLLT 413
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 293/551 (53%), Gaps = 10/551 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + +A ++F + V Y S++ A R + + QM+++ ++P+
Sbjct: 151 LIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPN 210
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L C ++ GE+I +++ V+ +++++ Y + G + A FE
Sbjct: 211 EHTMTSMLAECPRMI----GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFE 266
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ K++V W SM+ + +G+ +A+ + M E ++ +E + AC G
Sbjct: 267 NLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCL 323
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+ +L D++V +L+ MY ++G + V + ++V+W A IS Q
Sbjct: 324 GRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQ 383
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG + + LL++M S GF P+ + S L +CA + L G+ +H ++ DF +
Sbjct: 384 NGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCT 443
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG AR FD M D++SWN +I HG L F +M +
Sbjct: 444 GNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGW 503
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD STF ++L +H+GLV+EG +F LM +Y + PT HYACM+D+L R G +EAL
Sbjct: 504 QPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEAL 563
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ +M EP + +W LL+ C HK IG+ K+++L+ D + L+SN +AM +
Sbjct: 564 HMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHE 623
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++ VR+ M + G+KK G+S +EV E+ F+ D SH+ I +L +L + M+
Sbjct: 624 EWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSHSDSASIYQMLAELVVVMQ 683
Query: 555 AISSWLQGHME 565
+ L HM+
Sbjct: 684 --DTELDVHMQ 692
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 216/437 (49%), Gaps = 18/437 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS--STFTVALKAC 86
A LF+ +P + V + + I +R P ++ M++ V + +A A
Sbjct: 61 ALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAA 120
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L +GE++ AV G+ D ++GS ++ LY +CG M A F +M+ D+V ++
Sbjct: 121 AGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYT 180
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
S+++ L NG AV+ +M ++G+ +E M ++ C + G +HGY ++
Sbjct: 181 SLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKV 236
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ V T+L+D Y++ G D+A VF+N+ N+V+W +++ ++G L +
Sbjct: 237 MGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVF 296
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EM S EP+ + AL AC G + LG+ IH ++ ++ + +++ MY +
Sbjct: 297 SEMISEAVEPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRS 353
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G S A+ ++++ DL+SW I++ +G E+A++L LQM P+ F+S L
Sbjct: 354 GFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGL 413
Query: 386 SALSHSGLVEEGRYWFDLMV---SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S+ + L+++GR L + +K+ ++++ ++ G++ A D M+
Sbjct: 414 SSCADLALLDQGRQLHCLALKLGCDFKVCTGNA----LINMYSKCGQIGSARLAFDVMNL 469
Query: 443 EPGLAVWVALLSGCHNH 459
++ W +L+ G H
Sbjct: 470 HDVMS-WNSLIHGLAQH 485
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 171/349 (48%), Gaps = 12/349 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + L+ +K G++++A+ F++M RK++V W++ I+G NGQP A + M
Sbjct: 41 DVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADML 100
Query: 170 KEGIDADEV--VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ G+ A++ A A G G VH ++R D + + L+++Y++ G
Sbjct: 101 ESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGS 160
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+ A VF+ M ++V + +L+S +NG +E+L +M G +P+ ++ S L
Sbjct: 161 MWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAE 220
Query: 288 CAQIGFLKLGKSIHGYTVRRFDFNLVLG-TSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C ++ +G+ IHGY ++ V T++ID YS+ G A +F+ + S++++SW
Sbjct: 221 CPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSW 276
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
++ G E+AL +F +MI V+P+ F+ L A G V GR
Sbjct: 277 CSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGA---CGSVCLGRQ-IHCSAI 332
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K + + ++ + R+G V E ++ + P L W A +S
Sbjct: 333 KCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIEN-PDLVSWTAAISA 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK NL ++++YG + + ++ + ++ + I A + + +
Sbjct: 332 IKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAV 391
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L QM E P+ F+ L +C L L G ++ A++LG V G++++N+Y
Sbjct: 392 ALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMY 451
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG++ A +AF+ M D++ W+S+I+GL +G ++A+ M G D+ +
Sbjct: 452 SKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFI 511
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS- 239
++ C G + G + R+ L ++DM + G D A H+ KNM
Sbjct: 512 AVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPF 571
Query: 240 RINIVTWGALIS 251
+++ W L++
Sbjct: 572 EPDVLIWKTLLA 583
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 277/539 (51%), Gaps = 33/539 (6%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSL 89
+LF +P R +YN++I +S SP + LY +++E+ VRP T + + +L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK--------- 140
D +G + + + LG+G FVGS ++++Y K G + +A F++M+ K
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 141 ----------------------DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
D + W++M+ GL NG EA+D ++RM+ EG+ D+
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ AC L S G +H Y R +V V ++LVDMY+K + LA VF+ M
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ NI++W A+I G+ QN + + EMQ G +PD +L S + +CA + L+ G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 299 SIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
H V + + +++ +Y KCG A LFD+M D +SW ++ Y G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+E + LF +M+ +KPD TF +LSA S +GLVE+G +FD M + I P + HY
Sbjct: 460 KAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHY 519
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CM+DL +R+G +EA + + M P W LLS C IG+ A+ +L+ +P
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDP 579
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ + L+ + A + +W EVA +R+ MR +KK PG S ++ ++H F +D+SH
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 171/338 (50%), Gaps = 3/338 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I A+ LF+ + R T+ +++ ++ E L ++ +M E V D TF L A
Sbjct: 228 IEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTA 287
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C +L + G++I Y ++VFVGS+++++Y KC + A F +M ++++ W
Sbjct: 288 CGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISW 347
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++MI G N EAV A+ M+ +GI D+ + +I +CA+L G H ++
Sbjct: 348 TAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALV 407
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L + V +LV +Y K G ++ A +F MS + V+W AL++G+AQ G A T++L
Sbjct: 408 SGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDL 467
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYS 323
+M G +PD V+ + L AC++ G ++ G + D + T +ID+YS
Sbjct: 468 FEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYS 527
Query: 324 KCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGE 360
+ G A QM S D W +++S + G+ E
Sbjct: 528 RSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 12/249 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A +F + R + ++ ++I+ Y + E + +++M + ++PD
Sbjct: 319 LVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPD 378
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +C +L L+ G + A+ G + V ++++ LY KCG + +A F+
Sbjct: 379 DFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFD 438
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V W++++ G G+ +E +D +++M G+ D V +G++ AC SR
Sbjct: 439 EMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSAC-----SRA 493
Query: 196 GLSVHGYSIRRHLNLDVKV------QTSLVDMYAKTGHLDLASHVFKNMSR-INIVTWGA 248
GL G + D + T ++D+Y+++G A K M + W
Sbjct: 494 GLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 249 LISGFAQNG 257
L+S G
Sbjct: 554 LLSSCRLRG 562
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LYG I A +LF+E+ ++ +++ Y++ E + L+ +M+ ++PD
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPD 479
Query: 76 SSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
TF L AC ++ G + + +K ++ +D + + M++LY + G+ EA
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHY--TCMIDLYSRSGRFKEAEE 537
Query: 133 AFEKM-QRKDLVCWSSMINGLVFNGQ 157
++M D W+++++ G
Sbjct: 538 FIKQMPHSPDAFGWATLLSSCRLRGN 563
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 297/548 (54%), Gaps = 7/548 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S IIA Y ++ + A +LF+++P + +YN++I AY+ LGL++ M +
Sbjct: 76 SFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMG 135
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ D T + + AC D+ + ++ AV G+ + V V +++L Y K G +++A
Sbjct: 136 LDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAK 193
Query: 132 VAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M +D V W+SMI + + +A+ ++ M + G++ D + ++ A L
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCL 253
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH-LDLASHVFKNMSRINIVTWGAL 249
D GL HG I+ + + V + L+D+Y+K G + VF+ ++ ++V W +
Sbjct: 254 EDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTM 313
Query: 250 ISGFAQNG-LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+SG++QN LE +MQ G+ P+ S V + AC+ + GK IH ++
Sbjct: 314 VSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSD 373
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + ++I MYSKCG AR LFD+M + +S N +IA Y HG E+L LF
Sbjct: 374 IPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLF 433
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
M+E + P TF S+LSA +H+G VEEG +F++M K+ I+P +HY+CM+DLL R
Sbjct: 434 QWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGR 493
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG++ EA ++ M PG W +LL C H + K A +VL+L P + + ++
Sbjct: 494 AGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVL 553
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SN +A +WEEVA VRK MR G+KK PG S +EV +H F+ ED SH ++I L
Sbjct: 554 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 613
Query: 547 KKLYLEMR 554
+++ +M+
Sbjct: 614 EEMSGKMK 621
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 175/361 (48%), Gaps = 13/361 (3%)
Query: 89 LMDLKMGEEIW-RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L+ K G W RKA + +VF ++++ Y K + A F+++ DLV +++
Sbjct: 51 LLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNT 110
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I+ G+ A+ + M++ G+D D + +I AC D D +H ++
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSG 168
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNGLAGSTLELL 266
+ V V +L+ Y K G LD A VF M I + V+W ++I + Q+ L L
Sbjct: 169 FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLF 228
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
EM G D +L S L A + L G HG ++ F N +G+ +ID+YSKC
Sbjct: 229 QEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKC 288
Query: 326 --GVPSCARALFDQMQSRDLISWNVIIASYGIHGHG-EEALSLFLQMIETMVKPDHSTFA 382
G+ C R +F+++ DL+ WN +++ Y + E+AL F QM +P+ +F
Sbjct: 289 GGGMSDC-RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVEEALKIVDSM 440
++SA S+ +G+ L + K I P+ + ++ + ++ G +++A ++ D M
Sbjct: 348 CVISACSNLSSPSQGKQIHSLAL-KSDI-PSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
Query: 441 S 441
+
Sbjct: 406 A 406
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 42/316 (13%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++ C D G S+H I+ + + +Y+K G L A F+++S N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 243 I-------------------------------VTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V++ LIS +A G L L M+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 272 CGFEPDSVSLVSALLACA-QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G + D +L + + AC +G + +H V FD + + +++ Y K G
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLI---GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 330 CARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A+ +F M RD +SWN +I +YG H G +AL LF +M+ + D T AS+L+A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 389 SHSGLVEE--GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+ +E+ G F + K + ++DL ++ G + V TEP L
Sbjct: 251 T---CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 447 AVWVALLSGCHNHKKF 462
+W ++SG +++F
Sbjct: 308 VLWNTMVSGYSQNEEF 323
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D N+ ++I Y+K P A LFDQ+ DL+S+N +I++Y G AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 369 MIETMVKPDHSTFASLLSALS---------HSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
M E + D T +++++A HS V G FD VS
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSG---FDSYVSVNN---------A 178
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNP 477
++ + G++++A ++ M W +++ H++ S + +++++ LN
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNV 238
Query: 478 DDLGIHALVSNFFAME 493
D + ++++ F +E
Sbjct: 239 DMFTLASVLTAFTCLE 254
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 307/538 (57%), Gaps = 9/538 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D++S+ K+FE++ + ++ ++I +Y+R E + L +++M+K + P+
Sbjct: 801 LLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPN 860
Query: 76 SSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
T L +C ++ G+ + R+ ++ Y + + +++ LY +CG++ +
Sbjct: 861 LVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYES---LSPALVELYAECGRLGDCE 917
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ +++V W+S I+ G EA+ +++M I D + +I AC + G
Sbjct: 918 TILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTG 977
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +HG+ IR ++ D VQ S++DMY+K+G ++LA VF + +IVTW +++
Sbjct: 978 LVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLC 1036
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
GF+QNG + + L M E + V+ ++ + AC+ IG L+ G+ +H + +
Sbjct: 1037 GFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIKD 1096
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L T++IDMY+KCG + A +F M +R ++SW+ +I +YG+HG A+S F QM+E
Sbjct: 1097 LFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 1156
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ KP+ F ++LSA HSG VEEG+Y+F+LM + + P +H+AC +DLL+R+G+++
Sbjct: 1157 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KLFGVSPNSEHFACFIDLLSRSGDLK 1215
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + + M +VW +L++GC H+K I + + + + DD G + L+SN +A
Sbjct: 1216 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYA 1275
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
E +WEE +R M+ +KKVPGYS +E++ ++ F +++ Q E+I L L
Sbjct: 1276 EEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRFGAGEETCFQTEEIYMFLGNL 1333
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 244/456 (53%), Gaps = 8/456 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG ++ A K+F+ +P+R + +++++ + + L ++ M+ + V PD
Sbjct: 700 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPD 759
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T ++ C L L++ + + + D + +S+L +Y KCG + + FE
Sbjct: 760 AVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFE 819
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ +K+ V W++MI+ +A+ ++ M K GI+ + V + ++ +C G R
Sbjct: 820 KIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIRE 879
Query: 196 GLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHG++IRR L+ + + + +LV++YA+ G L + + NIV W + IS +A
Sbjct: 880 GKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYA 939
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G+ L L +M + +PDS +L S + AC G ++LGK IHG+ +R + +
Sbjct: 940 HRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEFV 999
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
SVIDMYSK G + A +FDQ++ R +++WN ++ + +G+ EA++LF M + +
Sbjct: 1000 QNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCL 1059
Query: 375 KPDHSTFASLLSALSHSGLVEEGRY-WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ + TF +++ A S G +E+GR+ L+V K T+ ++D+ A+ G++ A
Sbjct: 1060 EINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIKDLFTD---TALIDMYAKCGDLNTA 1116
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ +MS + W ++++ H + IG ++
Sbjct: 1117 ETVFRAMSNR-SIVSWSSMINAYGMHGR--IGSAIS 1149
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 232/450 (51%), Gaps = 14/450 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++I Y S+R +FE P Y +I + LY++++ E
Sbjct: 595 VTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKT 654
Query: 73 RPDSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ F L+AC S L +G ++ + ++ G +D + +S+L +Y + G +++A
Sbjct: 655 QISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAE 714
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ M +DLV WS++++ + N + +A+ +K M +G++ D V M+ +++ CA+LG
Sbjct: 715 KVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 774
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R SVHG R+ + D + SL+ MY+K G L + +F+ +++ N V+W A+IS
Sbjct: 775 CLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMIS 834
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ + + L EM G EP+ V+L S L +C G ++ GKS+HG+ +RR D
Sbjct: 835 SYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDP 894
Query: 311 NL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N L +++++Y++CG + + R+++ WN I+ Y G EAL LF QM
Sbjct: 895 NYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQM 954
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ +KPD T AS++SA ++GLV G+ + VS +Q + ++D+ +
Sbjct: 955 VTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEFVQNS------VIDMYS 1008
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++G V A + D + + W ++L G
Sbjct: 1009 KSGFVNLACTVFDQIKHR-SIVTWNSMLCG 1037
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 301/536 (56%), Gaps = 5/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y AR++F+E+ + + +++++I Y + P + LY+QM + P+
Sbjct: 44 VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPN 100
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F + AC SL + +G++I ++++ GY + FV +S++++Y+KC + ++A+ F
Sbjct: 101 EYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFT 160
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V ++++I G V N Q ++ +K M+++G+ D MG++ C + +
Sbjct: 161 NTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKR 220
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +++ +L+ + ++ MY++ + A F+ + ++++W LI+ +
Sbjct: 221 GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSH 280
Query: 256 NGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
L + M + PD + SAL ACA + + GK IH + +R R +L
Sbjct: 281 CDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLG 340
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++++MY+KCG A +F +M +L+SWN IIA +G HG GE A+ LF QM +
Sbjct: 341 VGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASG 400
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD TF LL+A +H+GLV++G+ +F+ M Y I P +H++C++D+L RAG + EA
Sbjct: 401 IRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + V V+LLS H IGE++AK +LKL P + L+SN +A +
Sbjct: 461 EEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASD 520
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W+ VA RK ++ SG+KK PG+S++EVNG + F + D +H + ++I +LK L
Sbjct: 521 GMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 193/419 (46%), Gaps = 15/419 (3%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + L C L+ G + ++ G +DVF+ + +LN+Y KCG A F+
Sbjct: 3 TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFD 62
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K+LV WS+MI+G G+P+ A+D Y +M + +E V +I ACA L
Sbjct: 63 EMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTL 119
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H S++ V SL+ MY K A VF N N V++ ALI+GF +
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
N LE M+ G PD + + L C LK G +H TV+ D +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETM 373
G +I MYS+ + A F ++ +D+ISWN +IA+ + L +F M ET
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+PD TF S L+A + + G+ ++ Q A +V++ A+ G + A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNA-LVNMYAKCGCIGYA 358
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN-----PDDLGIHALVS 487
I M L W +++G NH +GE+ + ++N PD + L++
Sbjct: 359 YDIFSKM-VHHNLVSWNTIIAGFGNH---GLGERAVELFEQMNASGIRPDSVTFIGLLT 413
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 277/532 (52%), Gaps = 32/532 (6%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
+N + SR P + Y ++ R D +F LKA + L G E+ A
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
++ D FV + +++Y CG++N A F++M +D+V W++MI G EA
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAF 197
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
++ MK + DE+++ ++ AC G+ R+ +++ + I + +D + T+LV MY
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 223 AKTGHLDLASHVFKNMS-------------------------------RINIVTWGALIS 251
A G +D+A F+ MS + ++V W +IS
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDF 310
+ ++ L + EM G +PD VS+ S + ACA +G L K +H V +
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES 377
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
L + ++I+MY+KCG R +F++M R+++SW+ +I + +HG +ALSLF +M
Sbjct: 378 ELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK 437
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V+P+ TF +L SHSGLVEEG+ F M +Y I P +HY CMVDL RA +
Sbjct: 438 QENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLL 497
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EAL++++SM + +W +L+S C H + +G+ AK++L+L PD G L+SN +
Sbjct: 498 REALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIY 557
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
A EQ+WE+V +R+ M + + K G S ++ NG+ H F++ DK H Q +I
Sbjct: 558 AREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEI 609
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 193/404 (47%), Gaps = 36/404 (8%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y I AR +F+E+ R V T+N++I Y R E L+ +M +V PD
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVE-----------------LGYG------------- 108
+ AC +++ I+ +E G G
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 109 -NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
++FV ++M++ Y KCG++++A V F++ ++KDLVCW++MI+ V + P+EA+ ++
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M GI D V M +I ACA+LG VH L ++ + +L++MYAK G
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD VF+ M R N+V+W ++I+ + +G A L L M+ EP+ V+ V L
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 288 CAQIGFLKLGKSIHGYTVRRFDFNLVLGT--SVIDMYSKCGVPSCARALFDQMQ-SRDLI 344
C+ G ++ GK I ++ L ++D++ + + A + + M + +++
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
W ++++ IHG E +++E ++PDH L+S +
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILE--LEPDHDGALVLMSNI 556
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 176/391 (45%), Gaps = 65/391 (16%)
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ ++ + L + +PR + Y+R++ G D+ + +++A + + G+ +HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ + D V+T +DMYA G ++ A +VF MS ++VTW +I + + GL
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDF--------- 310
+L EM+ PD + L + + AC + G ++ ++I+ + + R D
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 311 --------------------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
NL + T+++ YSKCG A+ +FDQ + +DL+ W +I
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY----------- 399
++Y + +EAL +F +M + +KPD + S++SA ++ G++++ ++
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 400 -----------------WFDLMVSKYKIQPTEK--HYACMVDLLARAGEVEEALKIVDSM 440
D ++ P ++ M++ L+ GE +AL + M
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 441 ---STEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ EP +V +L GC + G+K+
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + R +FE++P R V +++S+I A S + L L+ +M +E+V P+
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TF L C ++ G++I+ E + M++L+ + + EA+
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 135 EKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD-EVVMMGLIQA 186
E M ++V W S+++ +G+ A KR+ + D D +V+M I A
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 297/548 (54%), Gaps = 7/548 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S IIA Y ++ + A +LF+++P + +YN++I AY+ LGL++ M +
Sbjct: 76 SFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMG 135
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ D T + + AC D+ + ++ AV G+ + V V +++L Y K G +++A
Sbjct: 136 LDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAK 193
Query: 132 VAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M +D V W+SMI + + +A+ ++ M + G++ D + ++ A L
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCL 253
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH-LDLASHVFKNMSRINIVTWGAL 249
D GL HG I+ + + V + L+D+Y+K G + VF+ ++ ++V W +
Sbjct: 254 EDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTM 313
Query: 250 ISGFAQNG-LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+SG++QN LE +MQ G+ P+ S V + AC+ + GK IH ++
Sbjct: 314 VSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSD 373
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + ++I MYSKCG AR LFD+M + +S N +IA Y HG E+L LF
Sbjct: 374 IPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLF 433
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
M+E + P TF S+LSA +H+G VEEG +F++M K+ I+P +HY+CM+DLL R
Sbjct: 434 QWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGR 493
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG++ EA ++ M PG W +LL C H + K A +VL+L P + + ++
Sbjct: 494 AGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVL 553
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SN +A +WEEVA VRK MR G+KK PG S +EV +H F+ ED SH ++I L
Sbjct: 554 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 613
Query: 547 KKLYLEMR 554
+++ +M+
Sbjct: 614 EEMSGKMK 621
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 175/361 (48%), Gaps = 13/361 (3%)
Query: 89 LMDLKMGEEIW-RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L+ K G W RKA + +VF ++++ Y K + A F+++ DLV +++
Sbjct: 51 LLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNT 110
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I+ G+ A+ + M++ G+D D + +I AC D D +H ++
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSG 168
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNGLAGSTLELL 266
+ V V +L+ Y K G LD A VF M I + V+W ++I + Q+ L L
Sbjct: 169 FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLF 228
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
EM G D +L S L A + L G HG ++ F N +G+ +ID+YSKC
Sbjct: 229 QEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKC 288
Query: 326 --GVPSCARALFDQMQSRDLISWNVIIASYGIHGHG-EEALSLFLQMIETMVKPDHSTFA 382
G+ C R +F+++ DL+ WN +++ Y + E+AL F QM +P+ +F
Sbjct: 289 GGGMSDC-RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVEEALKIVDSM 440
++SA S+ +G+ L + K I P+ + ++ + ++ G +++A ++ D M
Sbjct: 348 CVISACSNLSSPSQGKQIHSLAL-KSDI-PSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
Query: 441 S 441
+
Sbjct: 406 A 406
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 42/316 (13%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++ C D G S+H I+ + + +Y+K G L A F+++S N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 243 I-------------------------------VTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V++ LIS +A G L L M+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 272 CGFEPDSVSLVSALLACA-QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G + D +L + + AC +G + +H V FD + + +++ Y K G
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLI---GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 330 CARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
A+ +F M RD +SWN +I +YG H G +AL LF +M+ + D T AS+L+A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 389 SHSGLVEE--GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
+ +E+ G F + K + ++DL ++ G + V TEP L
Sbjct: 251 T---CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 447 AVWVALLSGCHNHKKF 462
+W ++SG +++F
Sbjct: 308 VLWNTMVSGYSQNEEF 323
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D N+ ++I Y+K P A LFDQ+ DL+S+N +I++Y G AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 369 MIETMVKPDHSTFASLLSALS---------HSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
M E + D T +++++A HS V G FD VS
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSG---FDSYVSVNN---------A 178
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNP 477
++ + G++++A ++ M W +++ H++ S + +++++ LN
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNV 238
Query: 478 DDLGIHALVSNFFAME 493
D + ++++ F +E
Sbjct: 239 DMFTLASVLTAFTCLE 254
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 276/495 (55%), Gaps = 6/495 (1%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF+ + N +I A S P L Y ++ ++ V+PD TF + LK S
Sbjct: 67 LFDTINTPNTRLLNKMIAACSH---PHISLLCYAKLRQKGVQPDKHTFPLLLKT-FSKSI 122
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+ I+ + +LG+ D+F+G++++ + G + A F++ +D V W+++ING
Sbjct: 123 AQNPFMIYAQIFKLGFDLDLFIGNALIPAFANSGFVESARQVFDESPFQDTVAWTALING 182
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNL 210
V N P EA+ + +M+ D V + +++A A +GD+ FG VHG+ + + L
Sbjct: 183 YVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEAGRVQL 242
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D V ++L+DMY K GH + A VF + ++V W L++G+ Q+ L +M
Sbjct: 243 DGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDALRAFWDML 302
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPS 329
S P+ +L S L ACAQ+G L G+ +H Y + + N+ LGT+++DMY+KCG
Sbjct: 303 SDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKINMNVTLGTALVDMYAKCGSID 362
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F+ M +++ +W VII +HG AL++F M+++ ++P+ TF +L+A S
Sbjct: 363 EALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQPNEVTFVGVLAACS 422
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H G VEEG+ F+LM Y ++P HY CMVD+L RAG +E+A +I+D+M +P V
Sbjct: 423 HGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDAKQIIDNMPMKPSPGVL 482
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
AL C HK F +GE + ++ P+ G +AL++N + M Q WE A VRK M+
Sbjct: 483 GALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLANLYKMCQNWEAAAQVRKLMKGL 542
Query: 510 GMKKVPGYSVVEVNG 524
+ K PGYS +EV+G
Sbjct: 543 RVVKAPGYSRIEVDG 557
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 22/385 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I + + SAR++F+E P + + ++I Y + + P E L + +M D D
Sbjct: 148 LIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVKNDCPGEALKCFVKMRLRDRSVD 207
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T L+A + D G + VE G D +V S+++++Y KCG +A F
Sbjct: 208 AVTVASILRAAALVGDADFGRWVHGFYVEAGRVQLDGYVFSALMDMYFKCGHCEDACKVF 267
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ +D+VCW+ ++ G V + + ++A+ A+ M + + ++ + ++ ACA +G
Sbjct: 268 NELPHRDVVCWTVLVAGYVQSNKFQDALRAFWDMLSDNVAPNDFTLSSVLSACAQMGALD 327
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH Y +N++V + T+LVDMYAK G +D A VF+NM N+ TW +I+G A
Sbjct: 328 QGRLVHQYIECNKINMNVTLGTALVDMYAKCGSIDEALRVFENMPVKNVYTWTVIINGLA 387
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-----HGYTVRRFD 309
+G A L + M G +P+ V+ V L AC+ GF++ GK + H Y ++
Sbjct: 388 VHGDALGALNIFCCMLKSGIQPNEVTFVGVLAACSHGGFVEEGKRLFELMKHAYHLKP-- 445
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG---IHGH---GEEAL 363
+ ++DM + G A+ + D M + S V+ A +G +H GE
Sbjct: 446 -EMDHYGCMVDMLGRAGYLEDAKQIIDNMPMKP--SPGVLGALFGACLVHKAFEMGEHIG 502
Query: 364 SLFLQMIETMVKPDHSTFASLLSAL 388
+L + +P+HS +LL+ L
Sbjct: 503 NLLVNQ-----QPNHSGSYALLANL 522
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 295/562 (52%), Gaps = 45/562 (8%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV----RPDSSTFTV--ALK 84
++F +P R + ++NS+I AY+ + + + YN M+ R ST + + +
Sbjct: 96 RVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQ 155
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK--------------------- 123
CV L G ++ V+ G+ + VFVGS ++++Y K
Sbjct: 156 GCVHL-----GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVM 210
Query: 124 ----------CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
C ++ ++ F MQ KD + W++MI G NG REA+D ++ M+ E +
Sbjct: 211 YNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENL 270
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
+ D+ ++ AC + + G VH Y IR ++ V ++LVDMY K + A
Sbjct: 271 EMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAET 330
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF+ M+ N+V+W A++ G+ QNG + +++ +MQ+ G EPD +L S + +CA +
Sbjct: 331 VFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLAS 390
Query: 294 LKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L+ G H V + + +++ +Y KCG + LF +M D +SW +++
Sbjct: 391 LEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSG 450
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y G E L LF M+ KPD TF +LSA S +GLV++G F+ M+ +++I P
Sbjct: 451 YAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIP 510
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
E HY CM+DL +RAG +EEA K ++ M P W +LLS C H+ IG+ A+ +
Sbjct: 511 IEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESL 570
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
LKL P + + L+S+ +A + KWEEVA +RK MR G++K PG S ++ ++H F +
Sbjct: 571 LKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSAD 630
Query: 533 DKSHNQYEDIVYV-LKKLYLEM 553
D+S N + D +Y L+KL +M
Sbjct: 631 DQS-NPFSDQIYSELEKLNYKM 651
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 180/338 (53%), Gaps = 3/338 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I +R+LF ++ + ++ ++I +++ E + L+ +M E++ D TF L A
Sbjct: 224 IEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTA 283
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C +M L+ G+++ + Y +++FVGS+++++Y KC + A F KM K++V W
Sbjct: 284 CGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSW 343
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++M+ G NG EAV + M+ GI+ D+ + +I +CA+L G H ++
Sbjct: 344 TAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALV 403
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L + V +LV +Y K G ++ + +F MS ++ V+W AL+SG+AQ G A TL L
Sbjct: 404 SGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRL 463
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYS 323
M + GF+PD V+ + L AC++ G ++ G I ++ + T +ID++S
Sbjct: 464 FESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFS 523
Query: 324 KCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+ G AR ++M S D I W +++S H + E
Sbjct: 524 RAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNME 561
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 185/380 (48%), Gaps = 37/380 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+++ +++L+ Y K + E F M +D+V W+S+I+ G ++V AY M
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 170 KEG-IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
G + + + + ++ + G GL VHG+ ++ V V + LVDMY+KTG +
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 229 DLASHVFKNMSRINIV-------------------------------TWGALISGFAQNG 257
A F M N+V +W A+I+GF QNG
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L ++L EM+ E D + S L AC + L+ GK +H Y +R + N+ +G+
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++DMY KC A +F +M ++++SW ++ YG +G+ EEA+ +F M ++P
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEP 373
Query: 377 DHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
D T S++S+ ++ +EEG ++ +VS T + +V L + G +E++ +
Sbjct: 374 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN--ALVTLYGKCGSIEDSHR 431
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+ MS ++ W AL+SG
Sbjct: 432 LFSEMSYVDEVS-WTALVSG 450
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 118/238 (49%), Gaps = 2/238 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I SA +F ++ + V ++ ++++ Y + E + ++ M + PD
Sbjct: 315 LVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPD 374
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +C +L L+ G + +A+ G + + V ++++ LY KCG + ++ F
Sbjct: 375 DFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFS 434
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V W+++++G G+ E + ++ M G D+V +G++ AC+ G +
Sbjct: 435 EMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQK 494
Query: 196 GLSVHGYSIRRHLNLDVKVQ-TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
G + I+ H + ++ T ++D++++ G L+ A M + + W +L+S
Sbjct: 495 GNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 53/316 (16%)
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-F 274
+L+ Y+K L VF M ++V+W +LIS +A G +++ M G F
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDMYSKCGVPSCAR 332
+ ++L + L+ ++ G + LG +HG+ V+ F F + +G+ ++DMYSK G+ CAR
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVK-FGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 333 ALFDQ-------------------------------MQSRDLISWNVIIASYGIHGHGEE 361
FD+ MQ +D ISW +IA + +G E
Sbjct: 198 QAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDRE 257
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY---- 417
A+ LF +M ++ D TF S+L+A ++EG+ V Y I+ +
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGK-----QVHAYIIRTDYQDNIFVG 312
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN- 476
+ +VD+ + ++ A + M+ + + W A+L G + + E+ K +
Sbjct: 313 SALVDMYCKCKSIKSAETVFRKMNCK-NVVSWTAMLVG---YGQNGYSEEAVKIFCDMQN 368
Query: 477 ----PDDLGIHALVSN 488
PDD + +++S+
Sbjct: 369 NGIEPDDFTLGSVISS 384
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 254/415 (61%), Gaps = 1/415 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
N++ V + +L +YV + +A F++M +K+ V WS MI G V G+ + +K +
Sbjct: 1113 NNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKEL 1172
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G+ D + +I+AC D G +H ++ L+LD V +LVDMYAK +
Sbjct: 1173 IRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVI 1232
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A +F M ++VTW +I G+A+ G A +L L ++ GF PD +++VS + AC
Sbjct: 1233 EDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNAC 1292
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
A++G + + +H Y R RF +++LGT++IDMY+KCG AR +FD M +++ISW+
Sbjct: 1293 AKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWS 1352
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+IA+YG HG G++AL LF M+ + + P++ TF SLL A SH+GLVE+G LM
Sbjct: 1353 AMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWES 1412
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ ++P KH+ CMVDLL RAG++ EA + +++M+ E +W +LL C HK+ + EK
Sbjct: 1413 FGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEK 1472
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
AK +L+L P + G + L+SN +A +W++VA +R M K +KK+PGY+ +E+
Sbjct: 1473 AAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWIEL 1527
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 186/361 (51%), Gaps = 5/361 (1%)
Query: 1 MIKTNLSAYGN--SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+I TN Y N +++ +Y + A LF+E+P + +++ +I + +
Sbjct: 1104 LITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFM 1163
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ + ++I+ V+PD+ T +KAC + L MG I ++ G D FV ++++
Sbjct: 1164 QCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALV 1223
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KC + +A + F+ M KDLV W+ MI G G +E++ + +++EG D++
Sbjct: 1224 DMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKI 1283
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M+ ++ ACA LG VH Y R +LDV + T+++DMYAK G +D A +F NM
Sbjct: 1284 AMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNM 1343
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+++W A+I+ + +G LEL M S G P++++ VS L AC+ G ++ G
Sbjct: 1344 HHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGL 1403
Query: 299 SIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGI 355
++ F ++ T ++D+ + G + A + M +D W+ ++ + I
Sbjct: 1404 TLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRI 1463
Query: 356 H 356
H
Sbjct: 1464 H 1464
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 287/509 (56%), Gaps = 9/509 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELP-LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I++Y DI + ++FE+L ++ + N +I ++S+ + P + + L+ +M++E +R
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRT 451
Query: 75 DSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D F+V + +S++D L +G+++ ++ G D+ VGSS+ LY KCG + E+
Sbjct: 452 DE--FSVC--SLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + KD CW+SMI+G G REA+ + M +G DE + ++ C+
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HGY++R ++ + + ++LV+MY+K G L LA V+ + ++ V+ +LISG+
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGY 627
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+Q+GL L +M GF DS ++ S L A A LG +H Y +
Sbjct: 628 SQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEP 687
Query: 313 VLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G+S++ MYSK G + C +A F Q+ DLI+W +IASY HG EAL ++ M E
Sbjct: 688 SVGSSLLTMYSKFGSIDDCCKA-FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KPD TF +LSA SH GLVEE + + MV Y I+P +HY CMVD L R+G +
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA +++M +P VW LL+ C H + +G+ AKK ++L P D G + +SN A
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILA 866
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W+EV RK M+ +G++K PG+S V
Sbjct: 867 EVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 221/503 (43%), Gaps = 40/503 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ Y + A KLF+ +P V + N +I Y + E L +++M +
Sbjct: 90 LLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEAN 149
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++ + AC +L E + +++GY V S++++++ K + +A F
Sbjct: 150 EISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR 209
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ CW+++I G + N D + M D ++ ACA L RF
Sbjct: 210 DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRF 269
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G V I+ DV V T++VD+YAK GH+ A VF + ++V+W ++SG+ +
Sbjct: 270 GKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK 328
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ A S LE+ EM+ G E ++ ++ S + AC + + +H + + F + +
Sbjct: 329 SNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSV 388
Query: 315 GTSVIDMYSKCGVPSCARALF---DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++I MYSK G + +F D +Q ++++ NV+I S+ +A+ LF +M++
Sbjct: 389 AAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQ 446
Query: 372 TMVKPDHSTFASLLSALS-------------HSGLVEEGRYWFDLMVSKYKIQPTEKHY- 417
++ D + SLLS L SGLV + L K E+ Y
Sbjct: 447 EGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 418 ----------AC---MVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCHNHKK 461
AC M+ G + EA+ + M T P + A+L+ C +H
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 462 FSIGEKVAKKVLKLNPD---DLG 481
G+++ L+ D DLG
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLG 589
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 152/289 (52%), Gaps = 2/289 (0%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DVF+ S+L+ Y G M +A F+ + + D+V + MI+G + E++ + +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
G +A+E+ +I AC+ L F V ++I+ V+++L+D+++K +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE-PDSVSLVSALLAC 288
A VF++ N+ W +I+G +N G+ +L EM GF+ PDS + S L AC
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPDSYTYSSVLAAC 261
Query: 289 AQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
A + L+ GK + ++ ++ + T+++D+Y+KCG + A +F ++ + ++SW V
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+++ Y AL +F +M + V+ ++ T S++SA +V E
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 185 QACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
Q+ + L + R + + +RR+L DV + SL+ Y+ +G + A+ +F + + ++
Sbjct: 56 QSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDV 115
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
V+ +ISG+ Q+ L +L +M GFE + +S S + AC+ + + + +
Sbjct: 116 VSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCH 175
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
T++ + F V+ +++ID++SK A +F S ++ WN IIA + +
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYAC-- 419
LF +M KPD T++S+L+A + +E+ R F +V I+ E + C
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACAS---LEKLR--FGKVVQARVIKCGAEDVFVCTA 290
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VDL A+ G + EA+++ + P + W +LSG
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPN-PSVVSWTVMLSG 325
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 291/543 (53%), Gaps = 5/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR+ FE + R ++N+II+ Y ++E E ++ +MI + + PD
Sbjct: 491 LVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPD 550
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L C +L L+ GE++ V+ G ++ GSS++++YVKCG + A F
Sbjct: 551 EVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFS 610
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M + +V +++I G N EA+D ++ M+ EG++ E+ L+ AC
Sbjct: 611 CMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNL 669
Query: 196 GLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGF 253
G +H +R L D + SL+ MY + A +F + + W A+ISG
Sbjct: 670 GRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGH 729
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG + L+L EM PD + S L AC+ + L G+ IH D +
Sbjct: 730 TQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDE 789
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ G++V+DMY+KCG + +F++M S+ D+ISWN +I + +G+ E AL +F +M
Sbjct: 790 LTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKH 849
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
T ++PD TF +L+A SH+G V EGR FD+MV YKI P H ACM+DLL R G ++
Sbjct: 850 TRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLK 909
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + +D ++ EP +W LL C H G + A+K+++L P++ + L+SN +A
Sbjct: 910 EAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYA 969
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W+EV VR+ MR+ G++K+PG S + V + + F+ DK H +I +LK L
Sbjct: 970 ASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIA 1029
Query: 552 EMR 554
M+
Sbjct: 1030 LMK 1032
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 269/589 (45%), Gaps = 105/589 (17%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K + G I+ LY ++ A K F +L R + +NS++ YSR+ S +V+
Sbjct: 108 LKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVI 167
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS----- 116
+ + V P+ T+ + L +C L+D+ +G+++ +++G+ + F S
Sbjct: 168 WCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMY 227
Query: 117 --------------------------MLNLYVKCGKMNEAMVAFEKMQR----------- 139
M+ YV+ G EA+ FE MQ+
Sbjct: 228 SKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFV 287
Query: 140 ------------------------KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
++V W+ MI+G V G EA+D +K M K G+ +
Sbjct: 288 TVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKS 347
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ ++ A A L +GL VH +I++ LN +V V +SL++MYAK ++ A VF
Sbjct: 348 TRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVF 407
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
+ N+V W A++ G+AQNG A ++L EM+ CGF PD + S L ACA + L+
Sbjct: 408 DALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLE 467
Query: 296 LGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+G+ +H + ++ F++NL + +++DMY+KCG AR F+ +++RD +SWN II Y
Sbjct: 468 MGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYV 527
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+EA ++F +MI + PD + AS+LS ++ +E+G +V K +Q
Sbjct: 528 QEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLV-KSGLQTCL 586
Query: 415 KHYACMVDLLARAGEVE------------------------------EALKIVDSMSTE- 443
+ ++D+ + G +E EA+ + M E
Sbjct: 587 YAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNEG 646
Query: 444 --PGLAVWVALLSGCHNHKKFSIGEK----VAKKVLKLNPDDLGIHALV 486
P + +LL C K ++G + + K+ L + D LG+ LV
Sbjct: 647 LNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLV 695
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 249/474 (52%), Gaps = 15/474 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + +A+K+F+ L R + +N+++ Y++ +V+ L+++M PD
Sbjct: 390 LINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPD 449
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+T L AC L L+MG ++ ++ + ++FV ++++++Y KCG + EA FE
Sbjct: 450 EFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFE 509
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ +D V W+++I G V EA + ++RM +GI DEV + ++ CA+L
Sbjct: 510 FIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQ 569
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + ++ L + +SL+DMY K G ++ A +VF M ++V+ A+I+G+AQ
Sbjct: 570 GEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ 629
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---FDFNL 312
N L ++L EMQ+ G P ++ S L AC L LG+ IH +R +D +
Sbjct: 630 NDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDF 688
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
LG S++ MY + A LF + Q + I W II+ + +G EEAL L+ +M
Sbjct: 689 -LGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHR 747
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+PD +TFAS+L A S + +GR L+ + E + +VD+ A+ G+++
Sbjct: 748 NNARPDQATFASVLRACSILASLGDGRMIHSLIF-HVGLDSDELTGSAVVDMYAKCGDMK 806
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK-----KVLKLNPDDL 480
++++ + M ++ + W +++ G K E K K ++ PDD+
Sbjct: 807 SSVQVFEEMGSKNDVISWNSMIVG---FAKNGYAENALKIFDEMKHTRIRPDDV 857
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 218/464 (46%), Gaps = 37/464 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF ++P V +N +I + ++ E + + M K V+ ST L A S
Sbjct: 302 ACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIAS 361
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L G + +A++ G ++V+VGSS++N+Y KC KM A F+ + ++LV W++M
Sbjct: 362 LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAM 421
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ G NG + + + M+ G DE ++ ACA L G +H + I+ +
Sbjct: 422 LGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNF 481
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
++ V+ +LVDMYAK G L+ A F+ + + V+W A+I G+ Q +
Sbjct: 482 EYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRR 541
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M G PD VSL S L CA + L+ G+ +H + V+ L G+S+IDMY KCG
Sbjct: 542 MILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGA 601
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR +F M SR ++S N IIA Y EA+ LF +M + P TFASLL A
Sbjct: 602 IEAARYVFSCMPSRSVVSMNAIIAGYA-QNDLVEAIDLFQEMQNEGLNPSEITFASLLDA 660
Query: 388 ----------------LSHSGLVEEGRYW----------------FDLMVSKYKIQPTEK 415
+ GL+ +G + D++ S+++ +
Sbjct: 661 CTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTI 720
Query: 416 HYACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGC 456
+ ++ + G EEAL++ M + P A + ++L C
Sbjct: 721 LWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRAC 764
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 178/365 (48%), Gaps = 40/365 (10%)
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
+ + I + ++ G+G+ +GS++++LY KCG + A AF +++++D++ W+S+++
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
G + + + ++ G+ ++ ++ +CA L D G VH I+ +
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
+ SL+DMY+K G L A +F + + V+W A+I+G+ Q GL L++ +MQ
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCAR 332
G PD V+ V+ + AC +G R D +C
Sbjct: 278 GLVPDQVAFVTVITACVGLG--------------RLD------------------DAC-- 303
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
LF QM + ++++WNV+I+ + G EA+ F M +T VK ST S+LSA++
Sbjct: 304 DLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIAS-- 361
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+E Y + K Y + ++++ A+ ++E A K+ D++ E L +W
Sbjct: 362 -LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVLWN 419
Query: 451 ALLSG 455
A+L G
Sbjct: 420 AMLGG 424
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 1/206 (0%)
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
SR ++H +++ ++ +++VD+YAK G+++ A+ F + + +I+ W +++S
Sbjct: 97 SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+++ G + +Q+CG P+ + L +CA++ + LGK +H ++ F+FN
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
S+IDMYSKCG AR +FD + D +SW +IA Y G EEAL +F M +
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEG 397
+ PD F ++++A G +++
Sbjct: 277 LGLVPDQVAFVTVITACVGLGRLDDA 302
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 286/524 (54%), Gaps = 5/524 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKE-SPFE 59
++K N++ + ++++LY I A +LF+ +P R V ++N++I A R +
Sbjct: 85 LVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALD 144
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
++GLY++M KEDV+P+ TF + AC L+ L++ V G ++ FVGSS+++
Sbjct: 145 LVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVD 204
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y K K+ +A+ AF ++ DLV W+ MI+G N AV + +M K + D
Sbjct: 205 GYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFT 264
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV--FKN 237
+ +I+ C+ GD + G+ HG +I+ L + + +L+ MY+K +AS V F +
Sbjct: 265 LTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKC-EKGVASPVKIFGS 323
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+S NI++W A+ISGF QN + L EM G + S S L + L+ G
Sbjct: 324 ISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQG 383
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K IH ++ F +L + ++IDMYSKCG A +F +M D++S +I SYG H
Sbjct: 384 KQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQH 443
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G G+EAL + +M + PD TF L A SH GLVEEG F +M+ + ++P +H
Sbjct: 444 GKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREH 503
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+AC+VD+L RAG + EA +D M E + VW LL C H + +GEK A+K+++L
Sbjct: 504 FACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQ 563
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
P G + L++N +A WE+ VR+ + G+KK G S V
Sbjct: 564 PGRHGPYVLLANIYAERGSWEDKVMVREKLVSHGLKKQVGCSWV 607
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 22/367 (5%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F+ L+ C DL+ G + V+L + + + +L+LY+K G ++ A F+ M
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 139 RKDLVCWSSMINGLVFNG-QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
R+D+V +++MI+ V N + V Y +MKKE + + + GLI AC L R
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
H +++R L+ + V +SLVD YAK L+ A F + +++V+W +I G A+N
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
+ + +M D +L S + C++ G LK G HG ++ +
Sbjct: 242 SKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN 301
Query: 317 SVIDMYSKC--GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++I MYSKC GV S + +F + ++ISW +I+ + + EEA+ LF +M+ V
Sbjct: 302 ALITMYSKCEKGVASPVK-IFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGV 360
Query: 375 KPDHSTFASLLSALSHSGLVEEGRY--------WFDLMVSKYKIQPTEKHYACMVDLLAR 426
+ + +F+S+L + +E+G+ WF L +S ++D+ ++
Sbjct: 361 RENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNN---------ALIDMYSK 411
Query: 427 AGEVEEA 433
G +E+A
Sbjct: 412 CGSLEDA 418
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 151/296 (51%), Gaps = 5/296 (1%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++Q C D GD R G+SVH Y ++ ++N + + L+ +Y K GH+ A +F M R +
Sbjct: 65 ILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRD 124
Query: 243 IVTWGALISGFAQNGL-AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+V++ +IS +N A + L +M+ +P+ ++ + AC + L+L H
Sbjct: 125 VVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFH 184
Query: 302 GYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
+TVR N +G+S++D Y+K A F+++ DL+SWN++I + E
Sbjct: 185 AHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKE 244
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
A+ +F QM++ V+ D T S++ S G ++ G + + K + Y +
Sbjct: 245 HAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAI-KLGLAHETPIYNAL 303
Query: 421 VDLLARAGE-VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+ + ++ + V +KI S+S EP + W A++SG +++ + K++L+L
Sbjct: 304 ITMYSKCEKGVASPVKIFGSIS-EPNIISWTAMISGFMQNEQNEEAIGLFKEMLRL 358
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 301/532 (56%), Gaps = 3/532 (0%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
+A +LF++ ++ + +S+ + ++ + ++ +MI E + PDS TF L+
Sbjct: 63 NAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIA 122
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L +++ + + A+ D+ V +++L+LY K + +A F+KM KD V W+
Sbjct: 123 GLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNI 182
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G+P E ++ +K M + GI +D + +I + A L +G H + +R
Sbjct: 183 MIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG 242
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ V V SL+DMY + LD A +F M+ ++++W A+I G+ +NG + + L L
Sbjct: 243 SDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFS 302
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCG 326
+M+S G + D V +++ L A IG L+ K +HGY+++ +L L T+++ Y+KCG
Sbjct: 303 KMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG 362
Query: 327 VPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
A+ LF++ + +DLI WN +I+++ HG + L+ +M + KPD TF L
Sbjct: 363 SIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGL 422
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+A +SGLVE+G+ +F M Y QP+++HYACMV+LL RAG + EA ++V +M +P
Sbjct: 423 LTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKP 482
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW LLS C H + E A+K++ + P + G + L+SN +A KW+ VA +R
Sbjct: 483 DARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRS 542
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+R G+KK+PG S +E+NG + F + D++H + DI +L L LE++ +
Sbjct: 543 FLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEV 594
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 194/427 (45%), Gaps = 9/427 (2%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF--VGSSMLNLYVKC 124
M+ + + PD T+ L++C S ++ G I V+LG+ D+F V +++ +Y +C
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGF--DLFDVVATALAEMYEEC 58
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
+ A F+K KDL SS+ N + RM E + D L+
Sbjct: 59 IEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 118
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+ A L + VH +I L+ D+ V T+++ +Y+K L A +F M + V
Sbjct: 119 RFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRV 178
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W +I+ +A+ G LEL M G D + + + + AQ+ + GK H +
Sbjct: 179 VWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 238
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
+R D + + S+IDMY +C + A +F+ M + +ISW+ +I Y +G AL
Sbjct: 239 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL 298
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
SLF +M ++ D ++L A H G +E +Y + K + ++
Sbjct: 299 SLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSM-KLGLTSLPSLNTALLIT 357
Query: 424 LARAGEVEEALKIVDSMST-EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDL 480
A+ G +E A ++ + + L +W +++S NH +S K+ ++ N PD +
Sbjct: 358 YAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQV 417
Query: 481 GIHALVS 487
L++
Sbjct: 418 TFLGLLT 424
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 283/489 (57%), Gaps = 2/489 (0%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLM 90
K+F + P++ + +++++ A + E ++ M + V P+ + L AC ++
Sbjct: 65 KIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVG 124
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
L G+EI +++ + V +S++++Y KC +M+ F+++ KDL+ W+++I
Sbjct: 125 ALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIR 184
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
G + N PREA A+ RM+ ADE ++ LI A + +FG++ HG+ ++ L
Sbjct: 185 GCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLA 244
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
V + T+L+ MYAK G L+ A VF +++ + ++W A+IS A + + LE +MQ
Sbjct: 245 FVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQ 304
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
S P+ ++ VS L AC+ IG +LG+SI + + + N L +++ID+Y K G +
Sbjct: 305 STDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRIN 364
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
RA+F+++ ++DL+ W+ +I YG++G G+EAL F M+ VKP+ F S+LSA S
Sbjct: 365 QGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACS 424
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H GL EG F M KY I P HYACMVDL++R G +E AL+ V+ M EP +W
Sbjct: 425 HCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIW 484
Query: 450 VALLSGCHN-HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
ALL+GC + H I E VA++++ L+P + + ++SN +A + +W +V +RK + +
Sbjct: 485 GALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDE 544
Query: 509 SGMKKVPGY 517
G+KK GY
Sbjct: 545 KGLKKEMGY 553
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 191/390 (48%), Gaps = 4/390 (1%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+ + RP+ T ++A L M I ++LG+ ++V V ++++ Y
Sbjct: 1 MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDY-D 59
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M F + KDLV WS+M++ V +GQ EA + ++ M+ +G++ + V ++ ++ A
Sbjct: 60 MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPA 119
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA++G FG +HG+SI++ + V SLVDMYAK + + VF + ++++W
Sbjct: 120 CANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISW 179
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+I G +N + MQ F D + ++A Q K G + HG+ ++
Sbjct: 180 TTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLK 239
Query: 307 RFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
V +GT+++ MY+K G A +FDQ+ +D ISW+ +I+ + H AL
Sbjct: 240 NGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALET 299
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F QM T +P+ TF SLL A S G E G +K + ++DL
Sbjct: 300 FKQMQSTDERPNEITFVSLLQACSLIGAQELGES-IQAHATKAGYLSNAFLSSALIDLYC 358
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G + + I + + T+ L W ++++G
Sbjct: 359 KFGRINQGRAIFNEIPTK-DLVCWSSMING 387
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 147/283 (51%), Gaps = 5/283 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L A+ + ++ +Y ++ SA +F++L + +++++I ++ P+
Sbjct: 237 LLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNA 296
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + QM D RP+ TF L+AC + ++GE I A + GY ++ F+ S++++L
Sbjct: 297 LETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDL 356
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G++N+ F ++ KDLVCWSSMING NG EA++ + M G+ +EVV
Sbjct: 357 YCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVF 416
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ ++ AC+ G G S S+ + + K+ +VD+ ++ G+++ A M
Sbjct: 417 ISVLSACSHCGLEHEGWSCFS-SMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 475
Query: 239 S-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+ WGAL++G + EL+ E + G +P + S
Sbjct: 476 PMEPDKRIWGALLAGCRSTHGSIEIAELVAE-RLIGLDPQNTS 517
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 292/527 (55%), Gaps = 2/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF ++P R T+N+++ YS++ E + L+ +M + RP TF L A +
Sbjct: 252 AFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQ 311
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D++ G+++ V+ + +VFV +++L+ Y K ++ EA F +M D + ++ +
Sbjct: 312 LDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVL 371
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ +NG+ +E+++ +K ++ G D L+ A + G +H +I
Sbjct: 372 VTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA 431
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
++ V SLVDMYAK G A+ +F +++ + V W A+IS + Q GL L+L +E
Sbjct: 432 ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVE 491
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGV 327
MQ D+ + S + ACA + L LGK +H + + + N+ G++++DMY+KCG
Sbjct: 492 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 551
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F +M R+ +SWN +I++Y +G G+ L LF +M+ + ++PD + S+L A
Sbjct: 552 IKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCA 611
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH GLVEEG +FD M YK+ P ++HYA +D+L R G +EA K++ M EP
Sbjct: 612 CSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI 671
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ++L+ C HK + +K A ++ + D + +SN +A +W+ V V+K M
Sbjct: 672 MWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAM 731
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
R+ G+KKVP YS VE+ + H F DK+H Q +I+ L +L +M
Sbjct: 732 RERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKM 778
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 218/446 (48%), Gaps = 5/446 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y ++ AR LF+ + R T+ +I Y++ E GL+ +M +
Sbjct: 134 STNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHG 193
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ PD + L + ++ ++LGY + + V +S+L+ Y K + A
Sbjct: 194 IDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAF 253
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F + +D V +++++ G G REA++ + +M++ G E ++ A L
Sbjct: 254 QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLD 313
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D FG VHG+ ++ + +V V +L+D Y+K + AS +F M ++ +++ L++
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVT 373
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF-LKLGKSIHGYTVRRFDF 310
+A NG +LEL E+Q GF+ + + LL+ A I L +G+ IH T+
Sbjct: 374 CYAWNGRVKESLELFKELQFTGFDRRNFPFAT-LLSIAAISLNLDIGRQIHSQTIVTDAI 432
Query: 311 NLVL-GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ +L G S++DMY+KCG A +F + + + W +I+SY G E+ L LF++M
Sbjct: 433 SEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEM 492
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ D +T+AS++ A + + G+ ++ I A +VD+ A+ G
Sbjct: 493 QRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA-LVDMYAKCGS 551
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
+++AL++ M ++ W AL+S
Sbjct: 552 IKDALQMFQEMPVRNSVS-WNALISA 576
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 204/416 (49%), Gaps = 12/416 (2%)
Query: 45 NSIIIAYSRK-----ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW 99
N+II +R +P L + +IK P++ +K+ + DL +++
Sbjct: 65 NNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLF 124
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
E+ + N +F ++M+ Y+K G ++EA F+ M ++ V W+ +I G N Q R
Sbjct: 125 D---EMPHKN-IFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFR 180
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
EA + M + GID D V + L+ + VH + I+ + + V SL+
Sbjct: 181 EAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLL 240
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
D Y KT L LA +F ++ + VT+ AL++G+++ G + L +MQ G+ P
Sbjct: 241 DSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEF 300
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ + L A Q+ ++ G+ +HG+ V+ F +N+ + +++D YSK A LF +M
Sbjct: 301 TFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEM 360
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
D IS+NV++ Y +G +E+L LF ++ T + FA+LLS + S ++ GR
Sbjct: 361 PEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGR 420
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ I + +VD+ A+ GE EA +I ++ + + W A++S
Sbjct: 421 QIHSQTIVTDAISEILVGNS-LVDMYAKCGEFGEANRIFSDLAIQSSVP-WTAMIS 474
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 194/447 (43%), Gaps = 55/447 (12%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G S ++ Y + + +LF+EL G D R+ PF L
Sbjct: 365 GISYNVLVTCYAWNGRVKESLELFKELQFTGFD----------RRNFPFATL-------- 406
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
L ++L +G +I + + +++ VG+S++++Y KCG+ E
Sbjct: 407 -------------LSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGE 453
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F + + V W++MI+ V G + + + M++ I AD +++ACA
Sbjct: 454 ANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACAS 513
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L G +H + I +V ++LVDMYAK G + A +F+ M N V+W AL
Sbjct: 514 LASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNAL 573
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
IS +AQNG TL L EM G +PDSVSL+S L AC+ G ++ G R
Sbjct: 574 ISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTR--I 631
Query: 310 FNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALS 364
+ LV S IDM + G A L QM D I W+ ++ S GIH + E A
Sbjct: 632 YKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKK 691
Query: 365 LFLQMIETMVKPDHSTFASLLS----------------ALSHSGLVEEGRY-WFDLMVSK 407
Q+ V D + + ++ + A+ G+ + Y W ++
Sbjct: 692 AANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKT 751
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEAL 434
+ +K + M +++ + E+EE +
Sbjct: 752 HVFTANDKTHPQMREIMKKLDELEEKM 778
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 311/578 (53%), Gaps = 8/578 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y G V A +F+++P + + ++NS++ ++ + LGL MI +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT AL AC + + G + V G + +G++++++Y K G+M+E+
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS-R 194
+M R+D+V W+++I G + P +A+ A++ M+ EG+ ++ + ++ ++ AC GD
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y + D V+ SL+ MYAK G L + +F + NI+TW A+++ A
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+G L+L+ +M+S G D S L A A++ L+ G+ +HG V+ F+ +
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 601
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ + DMYSKCG + +R L SWN++I++ G HG+ EE + F +M+E
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP H TF SLL+A SH GLV++G ++D++ + ++P +H C++DLL R+G + EA
Sbjct: 662 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 721
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M +P VW +LL+ C H G K A+ + KL P+D ++ L SN FA
Sbjct: 722 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 781
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL---KKLY 550
+WE+V VRK M +KK S V++ ++ +F + D++H Q +I L KKL
Sbjct: 782 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 841
Query: 551 LE---MRAISSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
E + S LQ EE +EH+ + + + A Y L
Sbjct: 842 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 879
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 233/462 (50%), Gaps = 7/462 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LYG + +RK+FEE+P R V ++ S+++ YS K P EV+ +Y M E V +
Sbjct: 100 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 159
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++ ++ + +C L D +G +I + V+ G + + V +S++++ G ++ A F+
Sbjct: 160 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 219
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D + W+S+ NG E+ + M++ + + + L+ + ++
Sbjct: 220 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++ + V V +L+ MYA G A+ VFK M ++++W +L++ F
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G + L LL M S G + V+ SAL AC F + G+ +HG V +N ++
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++ MY K G S +R + QM RD+++WN +I Y ++AL+ F M V
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 375 KPDHSTFASLLSALSHSG-LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++ T S+LSA G L+E G+ +VS + E ++ + A+ G++ +
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSS 518
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+ + + + W A+L+ +H GE+V K V K+
Sbjct: 519 QDLFNGLDNR-NIITWNAMLAANAHHGH---GEEVLKLVSKM 556
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 221/449 (49%), Gaps = 4/449 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++ G ++ A +F+++ R ++NSI AY++ E +++ M + +
Sbjct: 201 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 260
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + L + K G I V++G+ + V V +++L +Y G+ EA + F+
Sbjct: 261 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 320
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KDL+ W+S++ V +G+ +A+ M G + V + AC
Sbjct: 321 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 380
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG + L + + +LV MY K G + + V M R ++V W ALI G+A+
Sbjct: 381 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 440
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKSIHGYTVRR-FDFNLV 313
+ L M+ G + +++VS L AC G L+ GK +H Y V F+ +
Sbjct: 441 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MY+KCG S ++ LF+ + +R++I+WN ++A+ HGHGEE L L +M
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V D +F+ LSA + ++EEG+ L V K + + D+ ++ GE+ E
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-KLGFEHDSFIFNAAADMYSKCGEIGEV 619
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
+K++ S L W L+S H F
Sbjct: 620 VKMLPP-SVNRSLPSWNILISALGRHGYF 647
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 217/429 (50%), Gaps = 4/429 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC-V 87
AR LF+ +P+R ++N+++ R E + + +M ++P S + AC
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
S + G ++ + G +DV+V +++L+LY G ++ + FE+M +++V W+S
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
++ G G+P E +D YK M+ EG+ +E M +I +C L D G + G ++
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L + V+ SL+ M G++D A+++F MS + ++W ++ + +AQNG + +
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M+ E +S ++ + L + K G+ IHG V+ FD + + +++ MY+ G
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
A +F QM ++DLISWN ++AS+ G +AL L MI + ++ TF S L+
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 370
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A E+GR L+V + + +V + + GE+ E+ +++ M +
Sbjct: 371 ACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 447 AVWVALLSG 455
A W AL+ G
Sbjct: 430 A-WNALIGG 437
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 4/337 (1%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G++ A F+ M ++ V W++M++G+V G E ++ +++M GI V
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 180 MMGLIQACADLGDS-RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ L+ AC G R G+ VHG+ + L DV V T+++ +Y G + + VF+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+V+W +L+ G++ G +++ M+ G + S+ + +C + LG+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
I G V+ + L + S+I M G A +FDQM RD ISWN I A+Y +G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
H EE+ +F M + + +T ++LLS L H + GR L+V K
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV-KMGFDSVVCVC 299
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++ + A AG EA + M T+ L W +L++
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKD-LISWNSLMA 335
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 256/435 (58%), Gaps = 1/435 (0%)
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVK G + A F++M +++ W++M+ GL +G E++ + M++EG+ DE +
Sbjct: 118 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 177
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L + CA L D G VH Y +R L+ D+ V +SL MY + G L + +
Sbjct: 178 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 237
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+NIV+ ISG QNG A LE M+ G E ++V+ VSA+ +C+ + L G+ I
Sbjct: 238 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 297
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ D + + TS++ MYS+CG + + + DL+ + +I++YG HGHG
Sbjct: 298 HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHG 357
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++A+ LF QM+ +P+ TF +LL A SHSGL +EG F+LM Y +QP+ KHY C
Sbjct: 358 QKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTC 417
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL R+G + EA ++ SM +P +W LLS C KKF + E++A++V++L+P D
Sbjct: 418 IVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHD 477
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN A +WE+V+ VR+TMR+ ++K PG S VE+ G++H F D+SH++
Sbjct: 478 SASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQ 537
Query: 540 EDIVYVLKKLYLEMR 554
+IV L+++ +R
Sbjct: 538 REIVECLEEMMTRIR 552
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 181/376 (48%), Gaps = 5/376 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y D+ +ARKLF+E+P R V T+N+++ + E LG + M +E ++PD
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ C L D+ G ++ V G D+ VGSS+ ++Y++CG + + A
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++V ++ I+G NG A++ + M+ G++A+ V + + +C+DL
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+ ++ V V TSLV MY++ G L + V S ++V A+IS +
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 353
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G + L +M + G EP+ V+ ++ L AC+ G G + + + +
Sbjct: 354 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 413
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
T ++D+ + G + A L M + D + W ++++ + A + ++IE
Sbjct: 414 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIE- 472
Query: 373 MVKPDHSTFASLLSAL 388
+ P S LLS +
Sbjct: 473 -LDPHDSASYVLLSNI 487
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 39/337 (11%)
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+A R +EG+ ++ + + +AC L R +H ++ D L+ Y
Sbjct: 31 EALHRRFREGLWSEPGLFSHIFRACQALPLLR---QLHAFAATSGAAADRFTANHLLLAY 87
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG-----------------------LA 259
A G A +F+ + + N+++W LI G+ +NG +A
Sbjct: 88 ADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVA 147
Query: 260 GST--------LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G T L M+ G +PD L S CA + + G+ +H Y VR D
Sbjct: 148 GLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDR 207
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +G+S+ MY +CG A + S +++S N I+ +G E AL F M
Sbjct: 208 DMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMR 267
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
V+ + TF S +++ S + +G+ L + K + +V + +R G +
Sbjct: 268 GAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAI-KTGVDKVVPVMTSLVHMYSRCGCL 326
Query: 431 EEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIG 465
++ ++ S L + A++S G H H + ++G
Sbjct: 327 GDSERVCLEYSGTD-LVLCSAMISAYGFHGHGQKAVG 362
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 294/509 (57%), Gaps = 3/509 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
II +Y +D+ SAR++F+ +P R T+NS+I Y E L N + + P
Sbjct: 92 IITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPK 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWR-KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ C M K+G +I V G +F+ +++++ Y +CG A+ F
Sbjct: 152 PELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVF 211
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M+ K++V W++MI+G + + EA ++ M+ EG+ + V + L+ ACA+ G +
Sbjct: 212 DGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVK 271
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH-LDLASHVFKNMSRINIVTWGALISGF 253
G +HGY+ R ++LV+MY + G + LA +F+ S ++V W ++I F
Sbjct: 272 HGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSF 331
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
++ G + L+L +M++ EP+ V+L++ + AC + LK G +HGY + F F++
Sbjct: 332 SRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSI 391
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G ++I+MY+KCG + +R +F +M +RD ++W+ +I++YG+HG GE+AL +F +M E
Sbjct: 392 SVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNER 451
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPD TF ++LSA +H+GLV EG+ F + + +I T +HYAC+VDLL R+G++E
Sbjct: 452 GVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEY 511
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL+I +M +P +W +L+S C H + I E +A ++++ P++ G + L++ +A
Sbjct: 512 ALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAE 571
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
W + VR+ M+ +KK G+S +E
Sbjct: 572 HGHWLDTEQVREAMKLQKLKKCYGFSRIE 600
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 213/462 (46%), Gaps = 38/462 (8%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+KA S G ++ A++ G ++ V +S++ +Y K + A F+ M +D
Sbjct: 58 IKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDP 117
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+S+ING + NG EA++A + G+ ++ ++ C S+ G +H
Sbjct: 118 ITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHAL 177
Query: 203 -SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+ + + + T+LVD Y + G +A VF M N+V+W +ISG +
Sbjct: 178 VVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDE 237
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
MQ+ G P+ V+ ++ L ACA+ GF+K GK IHGY R F+ +++++
Sbjct: 238 AFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVN 297
Query: 321 MYSKCGVP-SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
MY +CG P A +F+ RD++ W+ II S+ G +AL LF +M ++P++
Sbjct: 298 MYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYV 357
Query: 380 TFASLLSALSHSGLVEEG----------RYWFDLMVSKYKIQ------------------ 411
T +++SA ++ ++ G + F + V I
Sbjct: 358 TLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEM 417
Query: 412 PTEKH--YACMVDLLARAGEVEEALKIVDSMS---TEPGLAVWVALLSGCHNHKKFSIGE 466
P + ++ ++ G E+AL+I M+ +P ++A+LS C++ + G+
Sbjct: 418 PNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQ 477
Query: 467 KVAKKVLKLNPDDLGI--HALVSNFFAMEQKWEEVAGVRKTM 506
++ K+V L I +A + + K E +R+TM
Sbjct: 478 RIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTM 519
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 36/349 (10%)
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S+ I + G + + + + G + + +I+A + FG +H +++
Sbjct: 20 SNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALK 79
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ + V S++ MY K + A VF M + +TW +LI+G+ NG LE
Sbjct: 80 TGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEA 139
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYS 323
L ++ G P L S + C + K+G+ IH V R ++ L T+++D Y
Sbjct: 140 LNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYF 199
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
+CG A +FD M+ ++++SW +I+ H +EA + F M V P+ T +
Sbjct: 200 RCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIA 259
Query: 384 LLSALSHSGLVEEG--------RYWFD-------LMVSKYKIQPTEKH------------ 416
LLSA + G V+ G R+ F+ +V+ Y H
Sbjct: 260 LLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFR 319
Query: 417 ----YACMVDLLARAGEVEEALKIVDSMST---EPGLAVWVALLSGCHN 458
++ ++ +R G+ +ALK+ + M T EP +A++S C N
Sbjct: 320 DVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTN 368
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 311/578 (53%), Gaps = 8/578 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y G V A +F+++P + + ++NS++ ++ + LGL MI +
Sbjct: 392 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 451
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT AL AC + + G + V G + +G++++++Y K G+M+E+
Sbjct: 452 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 511
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS-R 194
+M R+D+V W+++I G + P +A+ A++ M+ EG+ ++ + ++ ++ AC GD
Sbjct: 512 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 571
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y + D V+ SL+ MYAK G L + +F + NI+TW A+++ A
Sbjct: 572 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 631
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+G L+L+ +M+S G D S L A A++ L+ G+ +HG V+ F+ +
Sbjct: 632 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 691
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ + DMYSKCG + +R L SWN++I++ G HG+ EE + F +M+E
Sbjct: 692 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 751
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP H TF SLL+A SH GLV++G ++D++ + ++P +H C++DLL R+G + EA
Sbjct: 752 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 811
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M +P VW +LL+ C H G K A+ + KL P+D ++ L SN FA
Sbjct: 812 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 871
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL---KKLY 550
+WE+V VRK M +KK S V++ ++ +F + D++H Q +I L KKL
Sbjct: 872 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 931
Query: 551 LE---MRAISSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
E + S LQ EE +EH+ + + + A Y L
Sbjct: 932 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 969
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 227/464 (48%), Gaps = 4/464 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L + +I++ G ++ A +F+++ R ++NSI AY++ E
Sbjct: 276 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 335
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+++ M + +S+T + L + K G I V++G+ + V V +++L +
Sbjct: 336 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 395
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y G+ EA + F++M KDL+ W+S++ V +G+ +A+ M G + V
Sbjct: 396 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 455
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ AC G +HG + L + + +LV MY K G + + V M R
Sbjct: 456 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 515
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKS 299
++V W ALI G+A++ L M+ G + +++VS L AC G L+ GK
Sbjct: 516 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 575
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H Y V F+ + + S+I MY+KCG S ++ LF+ + +R++I+WN ++A+ HGH
Sbjct: 576 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 635
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
GEE L L +M V D +F+ LSA + ++EEG+ L V K + +
Sbjct: 636 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-KLGFEHDSFIFN 694
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
D+ ++ GE+ E +K++ S L W L+S H F
Sbjct: 695 AAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYF 737
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 221/462 (47%), Gaps = 32/462 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LYG + +RK+FEE+P R V ++ S+++ YS K P EV+ +Y
Sbjct: 215 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK---------- 264
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
D +G +I + V+ G + + V +S++++ G ++ A F+
Sbjct: 265 ---------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 309
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D + W+S+ NG E+ + M++ + + + L+ + ++
Sbjct: 310 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 369
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++ + V V +L+ MYA G A+ VFK M ++++W +L++ F
Sbjct: 370 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 429
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G + L LL M S G + V+ SAL AC F + G+ +HG V +N ++
Sbjct: 430 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 489
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++ MY K G S +R + QM RD+++WN +I Y ++AL+ F M V
Sbjct: 490 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 549
Query: 375 KPDHSTFASLLSALSHSG-LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++ T S+LSA G L+E G+ +VS + E ++ + A+ G++ +
Sbjct: 550 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSS 608
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+ + + + W A+L+ +H GE+V K V K+
Sbjct: 609 QDLFNGLDNR-NIITWNAMLAANAHHGH---GEEVLKLVSKM 646
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 209/442 (47%), Gaps = 29/442 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR LF+ +P+R ++N+++ R E + + +M ++P
Sbjct: 113 LINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS 172
Query: 76 SSTFTVALKAC-VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S + AC S + G ++ + G +DV+V +++L+LY G ++ + F
Sbjct: 173 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 232
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+M +++V W+S++ G G+P E +D YK D
Sbjct: 233 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK-------------------------DES 267
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G + G ++ L + V+ SL+ M G++D A+++F MS + ++W ++ + +A
Sbjct: 268 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 327
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG + + M+ E +S ++ + L + K G+ IHG V+ FD +
Sbjct: 328 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++ MY+ G A +F QM ++DLISWN ++AS+ G +AL L MI +
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++ TF S L+A E+GR L+V + + +V + + GE+ E+
Sbjct: 448 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSES 506
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+++ M +A W AL+ G
Sbjct: 507 RRVLLQMPRRDVVA-WNALIGG 527
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 35/345 (10%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
++++N+Y K G++ A F+ M ++ V W++M++G+V G E ++ +++M GI
Sbjct: 111 NTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK 170
Query: 175 ADEVVMMGLIQACADLGDS-RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
V+ L+ AC G R G+ VHG+ + L DV V T+++ +Y G + +
Sbjct: 171 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 230
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF+ M N+V+W +L+ G++ G EP+ V I
Sbjct: 231 VFEEMPDRNVVSWTSLMVGYSDKG-----------------EPEEV-----------IDI 262
Query: 294 LK---LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
K LG+ I G V+ + L + S+I M G A +FDQM RD ISWN I
Sbjct: 263 YKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 322
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
A+Y +GH EE+ +F M + + +T ++LLS L H + GR L+V K
Sbjct: 323 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV-KMG 381
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++ + A AG EA + M T+ L W +L++
Sbjct: 382 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKD-LISWNSLMA 425
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 17/257 (6%)
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +VH ++ + L V +L++MY K G + A H+F M N V+W ++SG +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKSIHGYTVRR-FDFNLV 313
GL +E +M G +P S + S + AC + G + G +HG+ + ++
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL------SLFL 367
+ T+++ +Y G+ SC+R +F++M R+++SW ++ Y G EE + SL
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGR 270
Query: 368 QMIETMVKPD-HSTFA---SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
Q+I +VK S A SL+S L G V+ Y FD M + I + +
Sbjct: 271 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-----WNSIAAA 325
Query: 424 LARAGEVEEALKIVDSM 440
A+ G +EE+ +I M
Sbjct: 326 YAQNGHIEESFRIFSLM 342
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 267/466 (57%), Gaps = 3/466 (0%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNL-YVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
LK ++I + + G G + + +L+ Y ++ F + + D + S+I
Sbjct: 32 LKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLIT 91
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
P+E++ Y+RM I + +I++ ADL G ++H + L
Sbjct: 92 LTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGL 151
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D VQ +LV YAK+GH+ +A VF M +V W ++ISG+ QNG +EL MQ
Sbjct: 152 DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQ 211
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G +PDS + VS L ACAQ+G + LG +H Y R FD N+VLGT++++MYS+CG S
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVS 271
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR +FD M+ +++++W +I+ YG+HGHG +A+ LF +M +P++ TF ++LSA +
Sbjct: 272 KAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACA 331
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST-EPGLAV 448
H+GLV+EGR F M +Y + P+ +H CMVD+L RAG + EA + + + S EP AV
Sbjct: 332 HAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAV 391
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
W A+L C HK F +G +VA+ +L + P++ G + ++SN +A+ + + V +R M +
Sbjct: 392 WTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIR 451
Query: 509 SGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ +KK GYS ++V+ +++ F M DKSH + I L +L R
Sbjct: 452 NRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCR 497
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 6/311 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y + I R+LF +P ++S+I S+ P E L Y +M+ ++ + TF
Sbjct: 62 YAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTF 121
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
+ +K+ L +GE I GYG D +V +++++ Y K G + A F+KM
Sbjct: 122 SAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPE 181
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
K +V W+SMI+G NG +EAV+ + M+ G+ D + L+ ACA +G G V
Sbjct: 182 KTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWV 241
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H Y R +L+V + T+L++MY++ G++ A VF +M NIV W A+ISG+ +G
Sbjct: 242 HEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHG 301
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG---- 315
+EL EM G P++V+ V+ L ACA G + G+ I +T + ++ LV
Sbjct: 302 SQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQI--FTTMKQEYGLVPSVEHQ 359
Query: 316 TSVIDMYSKCG 326
++DM + G
Sbjct: 360 VCMVDMLGRAG 370
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 256/435 (58%), Gaps = 1/435 (0%)
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YVK G + A F++M +++ W++M+ GL +G E++ + M++EG+ DE +
Sbjct: 10 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 69
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L + CA L D G VH Y +R L+ D+ V +SL MY + G L + +
Sbjct: 70 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 129
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+NIV+ ISG QNG A LE M+ G E ++V+ VSA+ +C+ + L G+ I
Sbjct: 130 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 189
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ D + + TS++ MYS+CG + + + DL+ + +I++YG HGHG
Sbjct: 190 HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHG 249
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++A+ LF QM+ +P+ TF +LL A SHSGL +EG F+LM Y +QP+ KHY C
Sbjct: 250 QKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTC 309
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL R+G + EA ++ SM +P +W LLS C KKF + E++A++V++L+P D
Sbjct: 310 IVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHD 369
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN A +WE+V+ VR+TMR+ ++K PG S VE+ G++H F D+SH++
Sbjct: 370 SASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQ 429
Query: 540 EDIVYVLKKLYLEMR 554
+IV L+++ +R
Sbjct: 430 REIVECLEEMMTRIR 444
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 181/376 (48%), Gaps = 5/376 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y D+ +ARKLF+E+P R V T+N+++ + E LG + M +E ++PD
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ C L D+ G ++ V G D+ VGSS+ ++Y++CG + + A
Sbjct: 66 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++V ++ I+G NG A++ + M+ G++A+ V + + +C+DL
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+ ++ V V TSLV MY++ G L + V S ++V A+IS +
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G + L +M + G EP+ V+ ++ L AC+ G G + + + +
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 305
Query: 316 --TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
T ++D+ + G + A L M + D + W ++++ + A + ++IE
Sbjct: 306 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIE- 364
Query: 373 MVKPDHSTFASLLSAL 388
+ P S LLS +
Sbjct: 365 -LDPHDSASYVLLSNI 379
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 244 VTWGALISGFAQNG-----------------------LAGST--------LELLMEMQSC 272
++W LI G+ +NG +AG T L M+
Sbjct: 1 MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCA 331
G +PD L S CA + + G+ +H Y VR D ++ +G+S+ MY +CG
Sbjct: 61 GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 120
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
A + S +++S N I+ +G E AL F M V+ + TF S +++ S
Sbjct: 121 EAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL 180
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
+ +G+ L + K + +V + +R G + ++ ++ S L + A
Sbjct: 181 AALAQGQQIHALAI-KTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTD-LVLCSA 238
Query: 452 LLS--GCHNHKKFSIG 465
++S G H H + ++G
Sbjct: 239 MISAYGFHGHGQKAVG 254
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 301/532 (56%), Gaps = 3/532 (0%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
+A +LF++ ++ + +S+ + ++ + ++ +MI E + PDS TF L+
Sbjct: 178 NAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIA 237
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L +++ + + A+ D+ V +++L+LY K + +A F+KM KD V W+
Sbjct: 238 GLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNI 297
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI G+P E ++ +K M + GI +D + +I + A L +G H + +R
Sbjct: 298 MIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG 357
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ V V SL+DMY + LD A +F M+ ++++W A+I G+ +NG + + L L
Sbjct: 358 SDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFS 417
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCG 326
+M+S G + D V +++ L A IG L+ K +HGY+++ +L L T+++ Y+KCG
Sbjct: 418 KMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG 477
Query: 327 VPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
A+ LF++ + +DLI WN +I+++ HG + L+ +M + KPD TF L
Sbjct: 478 SIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGL 537
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L+A +SGLVE+G+ +F M Y QP+++HYACMV+LL RAG + EA ++V +M +P
Sbjct: 538 LTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKP 597
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW LLS C H + E A+K++ + P + G + L+SN +A KW+ VA +R
Sbjct: 598 DARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRS 657
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+R G+KK+PG S +E+NG + F + D++H + DI +L L LE++ +
Sbjct: 658 FLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEV 709
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 205/450 (45%), Gaps = 9/450 (2%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+I+ +R L +Y QM+ + + PD T+ L++C S ++ G I V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 104 ELGYGNDVF--VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
+LG+ D+F V +++ +Y +C + A F+K KDL SS+ N
Sbjct: 153 KLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGI 210
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
+ RM E + D L++ A L + VH +I L+ D+ V T+++ +
Sbjct: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y+K L A +F M + V W +I+ +A+ G LEL M G D +
Sbjct: 271 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ + + AQ+ + GK H + +R D + + S+IDMY +C + A +F+ M
Sbjct: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+ +ISW+ +I Y +G ALSLF +M ++ D ++L A H G +E +Y
Sbjct: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 450
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST-EPGLAVWVALLSGCHNH 459
+ K + ++ A+ G +E A ++ + + L +W +++S NH
Sbjct: 451 HGYSM-KLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANH 509
Query: 460 KKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
+S K+ ++ N PD + L++
Sbjct: 510 GDWSQCFKLYNRMKCSNSKPDQVTFLGLLT 539
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 179/380 (47%), Gaps = 6/380 (1%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
+T ++ C S+ L ++I + + G+ + + S +++ Y G +N ++ F
Sbjct: 28 NTLSLLFSRCNSIQHL---QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCS 84
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ +L +++++ L G+ + Y++M + + DE ++++C+ + FG
Sbjct: 85 VIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFG 144
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
++HGY ++ +L V T+L +MY + + A +F S ++ +L + QN
Sbjct: 145 RTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQN 204
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLG 315
+ M + PDS + + L A + ++L K +H V + +L++
Sbjct: 205 DNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVN 264
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
T+V+ +YSK AR LFD+M +D + WN++IA+Y G E L LF M + ++
Sbjct: 265 TAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIR 324
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
D T ++S+++ V+ G+ ++ H + ++D+ ++ A K
Sbjct: 325 SDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNS-LIDMYCECKILDSACK 383
Query: 436 IVDSMSTEPGLAVWVALLSG 455
I + M T+ + W A++ G
Sbjct: 384 IFNWM-TDKSVISWSAMIKG 402
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 316/579 (54%), Gaps = 9/579 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI--KEDVR 73
++ +Y I+ ++ +F+ + V ++N+++ +S + L QM+ EDV+
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D T A+ C L +E+ +++ + D + ++ + Y KCG ++ A
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRV 436
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F ++ K L W+++I G + PR ++DA+ +MK G+ D + L+ AC+ L
Sbjct: 437 FHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSL 496
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R G VHG+ IR L D+ V S++ +Y G L +F M ++V+W +I+G
Sbjct: 497 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGH 556
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNL 312
QNG L L +M G +P +S+++ AC+ + L+LG+ H Y ++ + N
Sbjct: 557 LQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNA 616
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S+IDMY+K G + + +F+ ++ + SWN +I YG+HG +EA+ LF +M T
Sbjct: 617 FIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRT 676
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD TF +L+A +HSGL+ EG + D M S + ++P KHYAC++D+L RAG+++
Sbjct: 677 GRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDN 736
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL++ MS EP + +W +LLS C H+ +GEKVA K+ L P+ + L+SN +A
Sbjct: 737 ALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAG 796
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI-----VYVLK 547
KW++V VR+ M++ ++K G S +E+NG++ +F++ ++ + +E+I + +K
Sbjct: 797 LGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMK 856
Query: 548 KLYLEMRAISSWLQGHMEEHEEHDPL-STAAQYAPTYYL 585
+ R +S +Q + E E+ + L + + A TY L
Sbjct: 857 IWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGL 895
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 226/445 (50%), Gaps = 18/445 (4%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVR 73
RII +Y +R F+ L + + +N++I +YSR E EVL ++ +MI K +
Sbjct: 125 RIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLL 184
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ TF +KAC + D+ +G + V+ G D+FVG+++++ Y G +++A+
Sbjct: 185 PDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKL 244
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M ++LV W+SMI NG + D ++ ++ CA +
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGDDGAFM------------PDVATVVTVLPVCAREREI 292
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VHG++++ L+ ++ V +L+DMY+K G + + +FK + N+V+W ++ GF
Sbjct: 293 GVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGF 352
Query: 254 AQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ G T +LL +M S + D V++++A+ C L K +H Y++++ F +
Sbjct: 353 SAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVY 412
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +L + + Y+KCG S A+ +F ++S+ L SWN +I Y +L LQM
Sbjct: 413 DELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMK 472
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + PD+ T SLLSA S + G+ ++ + ++ Y ++ L GE+
Sbjct: 473 NSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGEL 531
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
+ D+M + L W +++G
Sbjct: 532 CTVQVLFDAME-DNSLVSWNTVITG 555
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 139/276 (50%), Gaps = 16/276 (5%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D + + ++ +Y CG +++ AF+ ++ K+L W+++I+ N E ++ + +M
Sbjct: 118 SDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKM 177
Query: 169 -KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
K + D +I+ACA + D GL+VHG ++ L D+ V +LV Y G
Sbjct: 178 ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGF 237
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+ A +F M N+V+W ++I F+ NG G+ F PD ++V+ L
Sbjct: 238 VSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGA------------FMPDVATVVTVLPV 285
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
CA+ + +GK +HG+ V+ D LV+ +++DMYSK G ++ +F +++++SW
Sbjct: 286 CAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSW 345
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETM--VKPDHST 380
N ++ + G L QM+ VK D T
Sbjct: 346 NTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVT 381
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
Query: 183 LIQACADLGDSRFGLSVHGY-SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+QA D G +H S L D + T ++ MYA G D + F +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+ W A+IS +++N L LE+ ++M S PD+ + + ACA I + +G ++
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
HG V+ +L +G +++ Y G S A LFD M R+L+SWN +I + +G
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG 267
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 38/267 (14%)
Query: 294 LKLGKSIH----GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+++G+ IH G T R D VL T +I MY+ CG P +R+ FD ++S++L WN +
Sbjct: 100 IEMGRKIHHLVSGSTRLRSDD--VLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAV 157
Query: 350 IASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
I+SY + E L +F++MI +T + PD+ TF ++ A + V G L+V
Sbjct: 158 ISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTG 217
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE----------------------PGL 446
++ A +V G V +ALK+ D M P +
Sbjct: 218 LVEDLFVGNA-LVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMPDV 276
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN-FFAMEQKWEEVAGVRKT 505
A V +L C ++ +G+ V +KL+ D +V+N M KW + +
Sbjct: 277 ATVVTVLPVCAREREIGVGKGVHGWAVKLSLDK---ELVVNNALMDMYSKWGCIIDSQMI 333
Query: 506 MRKSGMKKVPGYSVV----EVNGELHA 528
+ + K V ++ + G++H
Sbjct: 334 FKLNNNKNVVSWNTMVGGFSAEGDIHG 360
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 177/593 (29%), Positives = 317/593 (53%), Gaps = 25/593 (4%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K++ +A G + +Y +++ A+ LF++ +YN++I YS++E F+ L
Sbjct: 266 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKAL 325
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+++++ + D + + +AC + L G +I+ A++ DV V ++ +++Y
Sbjct: 326 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMY 385
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC + EA F++M+R+D V W+++I NG+ E + + M + I+ DE
Sbjct: 386 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 445
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSR 240
+++AC G +G+ +H ++ + + V SL+DMY+K G ++ A + + R
Sbjct: 446 SVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 504
Query: 241 INI-------------------VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
N+ V+W ++ISG+ + L M G PD +
Sbjct: 505 TNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 564
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ L CA + LGK IH +++ ++ + ++++DMYSKCG +R +F++
Sbjct: 565 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLR 624
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RD ++WN +I Y HG GEEA+ LF +MI +KP+H TF S+L A +H GL+++G +
Sbjct: 625 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 684
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F +M Y + P HY+ MVD+L ++G+V+ AL+++ M E +W LL C H+
Sbjct: 685 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 744
Query: 461 -KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
+ E+ +L+L+P D + L+SN +A WE+V+ +R+ MR +KK PG S
Sbjct: 745 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 804
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI--SSWLQGHMEEHEEH 570
VE+ ELH F++ DK+H ++E+I L +Y EM+ SS++ G E E+
Sbjct: 805 VELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVPGVEVEEEDQ 857
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 227/460 (49%), Gaps = 23/460 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S ++I Y N++V A F +P+R V ++NS++ Y + + + ++ M +
Sbjct: 74 SWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAG 133
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
D TF + LK C L D +G +I V +G DV S++L++Y K + E++
Sbjct: 134 TEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + K+ V WS++I G V N A+ +K M+K + + ++++CA L
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ R G +H ++++ D V+T+ +DMYAK ++ A +F +N ++ A+I+
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMIT 313
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G++Q L L + S G D +SL ACA + L G I+ ++
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL 373
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + + IDMY KC + A +FD+M+ RD +SWN IIA++ +G G E L LF+ M+
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 371 ETMVKPDHSTFASLLSALS----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ ++PD TF S+L A + HS +V+ G M S + + +
Sbjct: 434 RSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCS------L 481
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
+D+ ++ G +EEA KI ++ + L HN +
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKR 521
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 179/354 (50%), Gaps = 5/354 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + M+N Y K M +A F M +D+V W+SM++G + NG+ ++++ + M
Sbjct: 71 DVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMG 130
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G + D +++ C+ L D+ G+ +HG +R + DV ++L+DMYAK
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+ VF+ + N V+W A+I+G QN L L+ EMQ S L +CA
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L+LG +H + ++ F + ++ T+ +DMY+KC A+ LFD+ ++ + S+N
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNA 310
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SK 407
+I Y HG +AL LF +++ + + D + + + A + + EG +DL + S
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSS 370
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ + A +D+ + + EA ++ D M ++ W A+++ + K
Sbjct: 371 LSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNGK 421
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 61/275 (22%)
Query: 288 CAQIGFLKLGKSIH------GYTVRRFDFNLVLG-------------------------- 315
CA+ G L+LGK H G+ F N +L
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+I+ Y+K A F+ M RD++SWN +++ Y +G +++ +F+ M +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D TFA +L S +E+ + +V + + ++D+ A+ E+
Sbjct: 136 FDGRTFAIILKVCS---CLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVES 192
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L++ + + ++ W A+++GC + S+ K K++ K+N
Sbjct: 193 LRVFQGIPEKNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVN----------------- 234
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHA 528
AGV +++ S ++ S + + G+LHA
Sbjct: 235 ------AGVSQSIYASVLRSCAALSELRLGGQLHA 263
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 293/508 (57%), Gaps = 3/508 (0%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I+ Y + SA K+F+ +PL+ ++N II Y + + ++ +M + + P
Sbjct: 68 ISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKP 127
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ CV L D+K+G I + G ++FV +S+++ Y K G A+ F+
Sbjct: 128 ELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFD 187
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ K++V W+++++G N A+D ++ M+ G+ + V ++ ++ A A+LG ++
Sbjct: 188 QIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKT 247
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH-LDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY+ R +LD +SL+ +Y ++ L LA F+ + ++V W ++I +
Sbjct: 248 GKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYC 307
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
++ + L+L M++ G EP+SV+L++ + AC + LK G HGY V+ +F+
Sbjct: 308 RSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTY 367
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++I+MYSKCG + +F +M +D +SW+ +I +YG+HGHG+EAL LF +M
Sbjct: 368 IGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQG 427
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+PD TF ++LSA +HSGLV+EG+ FD + K+ T +HYAC+VDLL ++G+V++A
Sbjct: 428 VEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDA 487
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
I+ +M +P +W +L+S C H + I E++A++++K P + H L+S +A
Sbjct: 488 FDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAES 547
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
W V VR+ MR G+ K G+S V
Sbjct: 548 GNWFAVEDVRRLMRVQGLSKCYGFSQVS 575
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 209/435 (48%), Gaps = 9/435 (2%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
++L Y ++ D+ ++ +KAC G +++ ++ G +D + +S +
Sbjct: 9 QILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFI 68
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+ Y K A+ F+ M KD + W+ +ING NG + +K M + GI
Sbjct: 69 SFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPE 128
Query: 179 VMMGLIQACADLGDSRFGLSVHGYS-IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ ++ C LGD + G ++H I + ++ V TSLVD Y K+G +A VF
Sbjct: 129 LVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQ 188
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ N+V+W AL+SG + N L+ MQ G P+ V+L++ L A A++G K G
Sbjct: 189 IEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTG 248
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMY--SKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
K IHGY R FD + +S+I +Y S+ G+ A+ F++ +D++ W+ II SY
Sbjct: 249 KEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGL-QLAKLTFERSNVKDVVMWSSIIGSYC 307
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
EAL LF M +P+ T ++++A + ++ G Y + K +
Sbjct: 308 RSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNG-YGTHGYIVKCGLNFDT 366
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKV 472
++++ ++ G V + +I M + ++ W L++ G H H K ++ ++
Sbjct: 367 YIGNALINMYSKCGCVVASHQIFKEMHIKDSVS-WSTLITAYGLHGHGKEALCLFHEMQL 425
Query: 473 LKLNPDDLGIHALVS 487
+ PD + A++S
Sbjct: 426 QGVEPDAMTFLAVLS 440
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 145/313 (46%), Gaps = 21/313 (6%)
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
+V G + + YK + I A+ ++ +I+AC+ FG+ ++ ++ L+ D
Sbjct: 1 MVSKGLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSD 60
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ S + YAK+ + A VF M + ++W +I+G+ QNG + EM
Sbjct: 61 FVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYE 120
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYSKCGVPS 329
CG P + S + C ++G +KLG++IH + R + + TS++D Y K G
Sbjct: 121 CGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSL 180
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +FDQ++ ++++SW +++ + AL F M V+P+ T ++L A +
Sbjct: 181 MALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFA 240
Query: 390 HSGLVEEG--------RYWFDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIVDSM 440
G + G R+ FDL + H+ + ++ + R+ E + K+
Sbjct: 241 ELGCAKTGKEIHGYAFRHGFDL----------DHHFLSSLIHIYCRSREGLQLAKLTFER 290
Query: 441 STEPGLAVWVALL 453
S + +W +++
Sbjct: 291 SNVKDVVMWSSII 303
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 299/534 (55%), Gaps = 3/534 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L + N ++ +YG D+ S+ ++F + + ++NS + ++ +V
Sbjct: 239 VLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDV 298
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ M + +V P S T + L A V L +G+E+ ++ +D+F+ +S++++
Sbjct: 299 LEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDM 358
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G + +A FE ++ +++V W++MI L NG EA M+K G + +
Sbjct: 359 YAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTL 418
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ L+ AC+ + + G +H +SI R L D+ V +L+D+YAK G L +A +F + S
Sbjct: 419 VNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIF-DRSE 477
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V++ LI G++Q+ +L L +M+S G E D+VS + L ACA + K GK I
Sbjct: 478 KDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEI 537
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG VRR + + L S++D+Y+K G+ + A +F+++ +D+ SWN +I YG+HG
Sbjct: 538 HGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQI 597
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ A LF M + V DH ++ ++LSA SH GLV+ G+ +F M+++ I+P + HYAC
Sbjct: 598 DVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYAC 656
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL RAG++ E+++I+ +M VW ALL C H + A+ + +L P+
Sbjct: 657 MVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEH 716
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMED 533
G + L+ N ++ W E ++ M+ ++K P YS V+ +L AF++ D
Sbjct: 717 SGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 229/457 (50%), Gaps = 30/457 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPF 58
++ L+A G ++ Y DI SAR + PLR +NS+ A + P
Sbjct: 29 LVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPS 88
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM-----GEEIWRKAVELGYG-NDVF 112
E L +YN M++ VRPD TF AL A + + + G E+ A+ G DVF
Sbjct: 89 EALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVF 148
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
G++++ Y G+ +A F++M +D+V W+S+++ L+ NG +A A M + G
Sbjct: 149 AGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSG 208
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
I + ++ ++ AC D FGLSVHG ++ L+ V + +LVDMY K G L+ +
Sbjct: 209 IPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSM 268
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF M N V+W + + FA G LE+ M P SV+L S L A +G
Sbjct: 269 RVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLG 328
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+ LGK +HGY++RR + ++ + S++DMY+K G A A+F+ ++ R+++SWN +IA
Sbjct: 329 YFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIA 388
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---W-------F 401
+ +G EA SL ++M + P+ T +LL A S V+ G+ W
Sbjct: 389 NLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMS 448
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
DL VS ++D+ A+ G++ A I D
Sbjct: 449 DLFVSN-----------ALIDVYAKCGQLSVAQDIFD 474
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 249/470 (52%), Gaps = 18/470 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR----KESPFEVLGLYNQMIKED 71
++ Y + AR++F+E+P R + ++NS++ A +++ V+G M++
Sbjct: 153 LVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVG----MMRSG 208
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ + ++ + AC + D G + ++ G + V +G++++++Y K G + +M
Sbjct: 209 IPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSM 268
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F MQ K+ V W+S + G + ++ ++ M + + V + L+ A DLG
Sbjct: 269 RVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLG 328
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G VHGYSIRR + D+ + SL+DMYAK G L+ AS +F+N+ N+V+W A+I+
Sbjct: 329 YFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIA 388
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
AQNG L++EMQ G P+S +LV+ L AC+++ +K+GK IH +++ R
Sbjct: 389 NLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMS 448
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L + ++ID+Y+KCG S A+ +FD+ + +D +S+N +I Y E+L LF QM
Sbjct: 449 DLFVSNALIDVYAKCGQLSVAQDIFDRSE-KDDVSYNTLIVGYSQSQCCFESLHLFQQMR 507
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGE 429
++ D +F LSA ++ ++G+ ++V ++ T A ++DL + G
Sbjct: 508 SAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVR--RLLNTHPFLANSLLDLYTKGGM 565
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+ A KI + + T +A W ++ G H + VA ++ L DD
Sbjct: 566 LATASKIFNRI-TRKDVASWNTMILGYGMHGQI----DVAFELFDLMKDD 610
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 276/489 (56%), Gaps = 10/489 (2%)
Query: 74 PDSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P TF +ALK+ L L+ GE++ ++++L + V +S+L LY +CG ++ A
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M V W+++I + G REAV + G+ D + ++ ACA + D
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +V + + + V V T+ VD+Y K G + A VF M + V WGA++ G
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+A NG L+L + MQ+ G PD ++ AL AC ++G L LG+ +R D+
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDE 303
Query: 311 ---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N VLGT++IDMY+KCG + A +F QM+ +D+I WN +I G+ GH + A +L
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIG 363
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QM ++ VK + +TF LL + +H+GL+++GR +F M Y I P +HY C+VDLL+RA
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRA 423
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA +++D M + ALL GC H+ + E V ++++L P + G + ++S
Sbjct: 424 GLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLS 483
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N ++ +WE+ A +R M++ G++KVP S VE G++H F + DKSH + I L
Sbjct: 484 NIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 543
Query: 548 KLYLEMRAI 556
+L LEM+ +
Sbjct: 544 ELGLEMKTM 552
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 5/360 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + A+++F+E+P ++ ++I AY E + + +RPD
Sbjct: 112 LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPD 171
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC + DL GE +WR A + G VFV ++ ++LYVKCG+M +A F+
Sbjct: 172 SFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFD 231
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ KD V W +M+ G NG PREA+D + M+ EG+ D + G + AC LG
Sbjct: 232 KMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDL 291
Query: 196 GL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G ++ L+ V + T+L+DMYAK G A VF+ M + +I+ W A+I G
Sbjct: 292 GRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLG 350
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G + L+ +M+ G + + + + L +C G ++ G+ + + + +
Sbjct: 351 MTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 410
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ S+ G+ A L D M + + ++ IH + E A + Q+I
Sbjct: 411 EHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIR 470
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 295/557 (52%), Gaps = 42/557 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+ +P R V ++N ++ A S+ E L + M + VR DS+T+T +L AC
Sbjct: 243 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 302
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L+ G+++ + + D +V S+++ LY K G EA F + ++ V W+ +
Sbjct: 303 LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 362
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G + G E+V+ + +M+ E + D+ + LI C D G +H ++
Sbjct: 363 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 422
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFK-------------------------------N 237
V V SL+ MYAK +L A +F+
Sbjct: 423 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 482
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKL 296
MS N++TW A++ + Q+G L + M S + PD V+ V+ CA +G KL
Sbjct: 483 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 542
Query: 297 GKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G I G TV+ L++ TS VI MYSKCG AR +FD + +D++SWN +I
Sbjct: 543 GDQIIGRTVK---VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 599
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y HG G++A+ +F +++ KPD+ ++ ++LS SHSGLV+EG+++FD+M + I P
Sbjct: 600 YSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISP 659
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+H++CMVDLL RAG + EA ++D M +P VW ALLS C H + E AK V
Sbjct: 660 GLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHV 719
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+L+ D G + L++ +A K ++ A +RK MR G+KK PGYS +EV+ ++H F +
Sbjct: 720 FELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKAD 779
Query: 533 DKSHNQYEDIVYVLKKL 549
D SH Q ++ + KKL
Sbjct: 780 DVSHPQ---VLAIRKKL 793
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 237/535 (44%), Gaps = 69/535 (12%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y + A +LF +P R V ++N+++ Y + L + M + D P++ T
Sbjct: 101 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 160
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN---------- 128
A+K+C +L + ++ + +D V +++++++V+CG ++
Sbjct: 161 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 220
Query: 129 ---------------------EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
A+ F+ M +D+V W+ M++ L +G+ REA+D
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M+ +G+ D + ACA L R+G +H IR ++D V ++LV++YAK+G
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 340
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A VF ++ N V W LISGF Q G ++EL +M++ D +L + +
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 288 CAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVIDMYSKC--------------------- 325
C L LG+ +H ++ +V+ S+I MY+KC
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 460
Query: 326 ----------GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
G + AR FD M +++I+WN ++ +Y HG E+ L ++ M+ E V
Sbjct: 461 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 520
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD T+ +L + G + G V I T A ++ + ++ G + EA
Sbjct: 521 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANA-VITMYSKCGRILEAR 579
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
K+ D ++ + + W A+++G H ++ +LK PD + A++S
Sbjct: 580 KVFDFLNVKD-IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 633
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 185/401 (46%), Gaps = 36/401 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY A+ +F L R + +I + + E + L+NQM E + D
Sbjct: 331 LVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLD 390
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ C S MDL +G ++ ++ G V V +S++++Y KC + A F
Sbjct: 391 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFR 450
Query: 136 KMQRKDLVCWSSMI----------------------NGLVFN---------GQPREAVDA 164
M KD+V W+SMI N + +N G + +
Sbjct: 451 FMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRM 510
Query: 165 YKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
YK M +E + D V + L + CADLG ++ G + G +++ L +D V +++ MY+
Sbjct: 511 YKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYS 570
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G + A VF ++ +IV+W A+I+G++Q+G+ +E+ ++ G +PD +S V+
Sbjct: 571 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 630
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR 341
L C+ G ++ GK R + + L + ++D+ + G + A+ L D M +
Sbjct: 631 VLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 690
Query: 342 DLIS-WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
W ++++ IHG+ E A L + + + PD ++
Sbjct: 691 PTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSY 730
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + MLN Y K G++++A+ F +M +D+ W+++++G + Q +++ + M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 170 KEGID-ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G + + +++C LG L + + D +V +LVDM+ + G +
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209
Query: 229 DLASH-------------------------------VFKNMSRINIVTWGALISGFAQNG 257
DLAS +F +M ++V+W ++S +Q+G
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGT 316
L+++++MQS G DS + S+L ACA++ L+ GK +H +R + + +
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 329
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++++Y+K G A+ +F+ + R+ ++W V+I+ + +G E++ LF QM ++
Sbjct: 330 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 389
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+L+S + GR L + +IQ + ++ + A+ ++ A I
Sbjct: 390 DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAI 448
Query: 437 VDSMSTEPGLAVWVALLSG 455
M+ E + W ++++
Sbjct: 449 FRFMN-EKDIVSWTSMITA 466
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I+ ARK+F+ L ++ + ++N++I YS+ + + +++ ++K +PD
Sbjct: 565 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 624
Query: 76 SSTFTVALKACVSLMDLKMGE---EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
++ L C ++ G+ ++ ++A + G + F S M++L + G + EA
Sbjct: 625 YISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF--SCMVDLLGRAGHLTEAKD 682
Query: 133 AFEKMQRKDLV-CWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADL 190
+ M K W ++++ +G A A K + + + D+ ++M I A A
Sbjct: 683 LIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 742
Query: 191 GD 192
D
Sbjct: 743 SD 744
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 298/543 (54%), Gaps = 2/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ SA ++++++ T N +I AY+R + ++ Q+ RP+
Sbjct: 154 LIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPN 213
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T++ L C ++ ++ G+++ V++ Y ++ VG+++L LY KCG M EA + FE
Sbjct: 214 HYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFE 273
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++++++ W++ ING +G ++A+ + M++ GI+ +E ++ +C + D
Sbjct: 274 SLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFID 333
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFA 254
G H I++ + V V T+++DMY+ G +D A FK M R + V+W ALI+G+
Sbjct: 334 GRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYV 393
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
N +E M + + + AC+ L IH ++ + NL
Sbjct: 394 LNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLH 453
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +S+I+ Y++CG A +F Q+ D++SWN II +Y +G +A+ L +MIE
Sbjct: 454 VASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEG 513
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KP TF ++LSA SHSGLV+EG+ +F MV Y IQP E H +CMVD+L RAG++E A
Sbjct: 514 NKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENA 573
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L + ++ +P ++W LL+ C + + E VA+K+L L P+D ++ +SN +A
Sbjct: 574 LDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEV 633
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W + R+ M + + K PG S +EVN +++ F DK+H + + LK+L ++
Sbjct: 634 GRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQI 693
Query: 554 RAI 556
+ I
Sbjct: 694 QDI 696
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 272/513 (53%), Gaps = 40/513 (7%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
++++ Y + +ARKLF+++P + + + A +R+ E L +++M KE +R
Sbjct: 842 AKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLR 901
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ LKAC L D + GE + ++ + +D ++ S+++ +Y KCG + +A
Sbjct: 902 PNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRV 961
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ + KDLV ++M++G +G EA+B ++M++ G+ + V LI + +GD
Sbjct: 962 FDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDK 1021
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS----RINIVTWGAL 249
+ S VF+ M+ ++V+W ++
Sbjct: 1022 -----------------------------------SMVSEVFRLMTANGVEPDVVSWTSV 1046
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRF 308
ISGF QN + EM GF P SV++ S L AC + L+ GK IHGY V
Sbjct: 1047 ISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGV 1106
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ ++ + ++++DMY+KCG S A+ LF M R+ ++WN +I Y HG+ EA+ LF Q
Sbjct: 1107 EKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQ 1166
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M E+ K DH TF ++L+A SH+G+VE G F M KY+I+P +HYACMVDLL RAG
Sbjct: 1167 MEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAG 1226
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++ EA ++ +M EP VW ALL C NH + E A+ + +L P+ G L+SN
Sbjct: 1227 KLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSN 1286
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+A +W A ++K M++ K PG S +E
Sbjct: 1287 LYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 181/386 (46%), Gaps = 36/386 (9%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T+ A+ L G + V +G + + +++ Y +CG+++ A F+
Sbjct: 803 SDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFD 862
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ ++ W + G EA+ A+ M+KEG+ ++ V+ +++AC L D R
Sbjct: 863 KIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRT 922
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G ++H ++ D + ++L+ MY+K GH++ A VF + ++V A++SG+AQ
Sbjct: 923 GENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQ 982
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G L+L+ +MQ G +P+ VS + + +Q+G D ++V
Sbjct: 983 HGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVG----------------DKSMV-- 1024
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+ V + + GV D++SW +I+ + + H E F +M++
Sbjct: 1025 SEVFRLMTANGVEP------------DVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFC 1072
Query: 376 PDHSTFASLLSALSHSGLVEEGR--YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
P T +SLL A ++ + G+ + + +++ ++ + +VD+ A+ G + EA
Sbjct: 1073 PSSVTISSLLPACTNVANLRHGKEIHGYAMVIG---VEKDVYVRSALVDMYAKCGYISEA 1129
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
KI+ M E W +L+ G NH
Sbjct: 1130 -KILFYMMPERNTVTWNSLIFGYANH 1154
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 25/386 (6%)
Query: 21 GGKNDIVSARKLFEELPLR-GV------------DTYNSIIIA--YSRKESPFEVLGLYN 65
GG D+ +A LFE+ P R GV D + A ++R E+P G
Sbjct: 51 GGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFG--- 107
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
P AL C +++G V++G G+D FV +S++++Y KCG
Sbjct: 108 -----GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCG 162
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
+++ A+ ++KM D + +I+ NG +A + ++ G + ++
Sbjct: 163 EVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLA 222
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
C + + G +H + ++ + V +L+ +Y+K G ++ A VF+++ + NI++
Sbjct: 223 VCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIIS 282
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W A I+GF Q+G L+ M+ G EP+ + L +C + G+ H +
Sbjct: 283 WTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVI 342
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEAL 363
++ + +GT++IDMYS G A F QM ++ +SWN +IA Y ++ E+A+
Sbjct: 343 KKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAM 402
Query: 364 SLFLQMIETMVKPDHSTFASLLSALS 389
F +M++ V + T++++ A S
Sbjct: 403 EAFCRMVKEDVACNEFTYSNIFKACS 428
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCA 331
GF P + SAL C + G ++LG+ H + V+ + + TS+IDMY+KCG A
Sbjct: 109 GF-PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
++D+M S D + N +I++Y +G +A +F+Q+ +P+H T++++L+
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
++EG+ +V + T A ++ L ++ G +EEA + +S+ + + W A
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNA-LLTLYSKCGMMEEAEIVFESLR-QRNIISWTA 285
Query: 452 LLSGCHNHKKFSIGEKVAKKVLK 474
++G + H F KK LK
Sbjct: 286 SINGFYQHGDF-------KKALK 301
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+N+ + + +I Y + +A ++F ++ V ++NSII AYS+ P++
Sbjct: 443 LIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKA 502
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLN 119
+ L +MI+E +P S TF L AC ++ G+E ++ V+ + S M++
Sbjct: 503 IFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVD 562
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVC-WSSMINGLVFN 155
+ + G++ A+ +K+ K W ++ +N
Sbjct: 563 ILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYN 599
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 279/468 (59%), Gaps = 9/468 (1%)
Query: 95 GEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV 153
G ++ A+ G + +D F S++L++Y C + +A AF+++ + V ++M +G V
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 154 FNGQPREAVDAYKRMKKEG--IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
N ++ ++++ G DE + A A + D S+H ++ L+ D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 212 VKVQTSLVDMYAKTGHLDL--ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
V +++D YAK G DL A VF M + ++V+W ++I+ +AQNG++ L L +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTMEK-DVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 270 --QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
S + ++V+L + LLACA G ++ GK IH VR + N+ +GTSV+DMYSKCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR F +++ ++++SW+ +I YG+HGHG+EAL +F +M + P++ TF S+L+
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SH+GL+++GRYW++ M ++ I+P +HY CMVDLL RAG ++EA ++ M +P
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
A+W ALLS C HK + E AK++ +L+ + G + L+SN +A W++V +R +
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ G++K PGYS VE+ G H F + DKSH Q+++I L KL +M+
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQ 574
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 171/360 (47%), Gaps = 10/360 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S ++ +Y + + ARK F+E+P ++ Y R + L L+ ++I
Sbjct: 127 SASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASG 186
Query: 72 --VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK--M 127
D + VA A + D + + V+ G D V ++ML+ Y K G+ +
Sbjct: 187 SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDL 246
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM--KKEGIDADEVVMMGLIQ 185
A F+ M+ KD+V W+SMI NG +A+ Y++M I + V + ++
Sbjct: 247 GAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILL 305
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
ACA G + G +H +R L +V V TS+VDMY+K G +++A F+ + NI++
Sbjct: 306 ACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILS 365
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W A+I+G+ +G L++ EM G P+ ++ +S L AC+ G L G+ +
Sbjct: 366 WSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMK 425
Query: 306 RRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
+RF + ++D+ + G A L +M+ + D W ++++ IH + E A
Sbjct: 426 KRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELA 485
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALY--GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
++KT L V ++ Y GG+ D+ +ARK+F+ + + V ++NS+I Y++
Sbjct: 219 VVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSA 277
Query: 59 EVLGLYNQM--IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
+ LGLY +M + ++ ++ T + L AC ++ G+ I + V +G +V+VG+S
Sbjct: 278 DALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTS 337
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++++Y KCG++ A AF+K++ K+++ WS+MI G +G +EA+D + M + G + +
Sbjct: 338 VVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPN 397
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHV 234
+ + ++ AC+ G G + ++++ ++ V+ +VD+ + G LD A +
Sbjct: 398 YITFISVLAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGL 456
Query: 235 FKNMS-RINIVTWGALISG 252
K M + + WGAL+S
Sbjct: 457 IKEMKVKPDAAIWGALLSA 475
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 283/507 (55%), Gaps = 2/507 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y ++ AR+LF L R + +++ + A P EVL ++ M E ++PD
Sbjct: 340 IVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPD 399
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ ++ + C + ++ +G+ + A++ +D+ + ++++++Y++ AM F
Sbjct: 400 KAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFN 459
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+MQ KD+V W+++ING G P A++ + R++ GI D M+GL ACA + D
Sbjct: 460 RMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDL 519
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFA 254
G +HG + D+ V+ +L+DMYAK G L +F + + V+W +I+G+
Sbjct: 520 GTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYL 579
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
NG + + M+ P+ V+ V+ L A + + L+ + H +R F +
Sbjct: 580 HNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTL 639
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G S+IDMY+KCG + F +M+++D ISWN ++++Y +HG GE A++LF M E+
Sbjct: 640 IGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESN 699
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+ D ++ S+LSA HSGL++EG F M K+ ++P+ +HYACMVDLL AG +E
Sbjct: 700 VRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEV 759
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L +++ M+TEP VW ALL+ C H ++GE +LKL P + H ++S+ +A
Sbjct: 760 LSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQC 819
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W + R + G+KK+PGYS V
Sbjct: 820 GRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 240/442 (54%), Gaps = 4/442 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SA+++F+ + +R ++ +++ Y + FE L L ++M + +V+ +
Sbjct: 239 LIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMN 298
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
AL + DL+ G+EI+ A+++G +D+ V + ++ +Y KCG++ +A F
Sbjct: 299 KVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFL 358
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ +DLV WS+ ++ LV G PRE + ++ M+ EG+ D+ ++ L+ C ++ +
Sbjct: 359 SLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGL 418
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+I+ + D+ + T+LV MY + A +F M +IV W LI+GF +
Sbjct: 419 GKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTK 478
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G LE+ +Q G PDS ++V ACA + L LG +HG + F+ ++ +
Sbjct: 479 YGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHV 538
Query: 315 GTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++DMY+KCG + S R +D +SWNV+IA Y +G+ EA+S F +M
Sbjct: 539 KVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLEN 598
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+P+ TF ++L A+S+ ++ E + ++ + T + ++D+ A+ G++ +
Sbjct: 599 VRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNS-LIDMYAKCGQLRYS 657
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
K M + ++ W A+LS
Sbjct: 658 EKCFHEMENKDTIS-WNAMLSA 678
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 235/433 (54%), Gaps = 5/433 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
N ++ F ++ + YNS I AYS+ + + LY+ ++K ++PD TF L
Sbjct: 47 NPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVL 106
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KAC S +D G I++ V G DV++G+S+++++ K G ++ A F+KM KD V
Sbjct: 107 KACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGV 166
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
CW++MI+GL + P EA++ + RM+ EG + D+V ++ L A + LGD S+HGY
Sbjct: 167 CWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYV 226
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+RR ++ V SL+DMY K G + A VF M + V+W +++G+ +NG L
Sbjct: 227 VRR--SICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGL 284
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
+LL +M+ + + V++V+ALL A++ L+ GK I+ Y ++ ++V+ T ++ MY
Sbjct: 285 QLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMY 344
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+KCG AR LF ++ RDL++W+ +++ G+ E LS+F M +KPD + +
Sbjct: 345 AKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILS 404
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
L+S + + G+ + K ++ +V + R A+ + + M
Sbjct: 405 ILVSGCTEISNIGLGKIMHCYAI-KADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQI 463
Query: 443 EPGLAVWVALLSG 455
+ + VW L++G
Sbjct: 464 K-DIVVWNTLING 475
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 175/375 (46%), Gaps = 7/375 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK ++ + + V ++++Y A LF + ++ + +N++I +++ P L
Sbjct: 427 IKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLAL 486
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++N++ + PDS T AC + DL +G + + G+ +D+ V +++++Y
Sbjct: 487 EMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMY 546
Query: 122 VKCGKMNEAMVAFEKMQR-KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
KCG + F + KD V W+ MI G + NG EA+ ++RMK E + + V
Sbjct: 547 AKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTF 606
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ A + L R ++ H IR + SL+DMYAK G L + F M
Sbjct: 607 VTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMEN 666
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ ++W A++S +A +G + L MQ DSVS +S L AC G ++ G I
Sbjct: 667 KDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDI 726
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHG 357
+ + ++D+ G+ +L ++M + D W ++A+ IH
Sbjct: 727 FASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHS 786
Query: 358 H---GEEALSLFLQM 369
+ GE A+ L++
Sbjct: 787 NVTLGEVAVHHLLKL 801
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 311/578 (53%), Gaps = 8/578 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y G V A +F+++P + + ++NS++ ++ + LGL MI +
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 344
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT AL AC + + G + V G + +G++++++Y K G+M+E+
Sbjct: 345 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 404
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS-R 194
+M R+D+V W+++I G + P +A+ A++ M+ EG+ ++ + ++ ++ AC GD
Sbjct: 405 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y + D V+ SL+ MYAK G L + +F + NI+TW A+++ A
Sbjct: 465 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 524
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+G L+L+ +M+S G D S L A A++ L+ G+ +HG V+ F+ +
Sbjct: 525 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 584
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ + DMYSKCG + +R L SWN++I++ G HG+ EE + F +M+E
Sbjct: 585 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 644
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP H TF SLL+A SH GLV++G ++D++ + ++P +H C++DLL R+G + EA
Sbjct: 645 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 704
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M +P VW +LL+ C H G K A+ + KL P+D ++ L SN FA
Sbjct: 705 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 764
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL---KKLY 550
+WE+V VRK M +KK S V++ ++ +F + D++H Q +I L KKL
Sbjct: 765 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 824
Query: 551 LE---MRAISSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
E + S LQ EE +EH+ + + + A Y L
Sbjct: 825 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 862
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 233/462 (50%), Gaps = 7/462 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LYG + +RK+FEE+P R V ++ S+++ YS K P EV+ +Y M E V +
Sbjct: 83 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 142
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++ ++ + +C L D +G +I + V+ G + + V +S++++ G ++ A F+
Sbjct: 143 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 202
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D + W+S+ NG E+ + M++ + + + L+ + ++
Sbjct: 203 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 262
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++ + V V +L+ MYA G A+ VFK M ++++W +L++ F
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G + L LL M S G + V+ SAL AC F + G+ +HG V +N ++
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++ MY K G S +R + QM RD+++WN +I Y ++AL+ F M V
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 442
Query: 375 KPDHSTFASLLSALSHSG-LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++ T S+LSA G L+E G+ +VS + E ++ + A+ G++ +
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSS 501
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+ + + + W A+L+ +H GE+V K V K+
Sbjct: 502 QDLFNGLDNR-NIITWNAMLAANAHHGH---GEEVLKLVSKM 539
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 221/449 (49%), Gaps = 4/449 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++ G ++ A +F+++ R ++NSI AY++ E +++ M + +
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + L + K G I V++G+ + V V +++L +Y G+ EA + F+
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KDL+ W+S++ V +G+ +A+ M G + V + AC
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG + L + + +LV MY K G + + V M R ++V W ALI G+A+
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKSIHGYTVRR-FDFNLV 313
+ L M+ G + +++VS L AC G L+ GK +H Y V F+ +
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MY+KCG S ++ LF+ + +R++I+WN ++A+ HGHGEE L L +M
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V D +F+ LSA + ++EEG+ L V K + + D+ ++ GE+ E
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-KLGFEHDSFIFNAAADMYSKCGEIGEV 602
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
+K++ S L W L+S H F
Sbjct: 603 VKMLPP-SVNRSLPSWNILISALGRHGYF 630
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 212/422 (50%), Gaps = 4/422 (0%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC-VSLMDLKM 94
+P+R ++N+++ R E + + +M ++P S + AC S +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 95 GEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVF 154
G ++ + G +DV+V +++L+LY G ++ + FE+M +++V W+S++ G
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
G+P E +D YK M+ EG+ +E M +I +C L D G + G ++ L + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
+ SL+ M G++D A+++F MS + ++W ++ + +AQNG + + M+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
E +S ++ + L + K G+ IHG V+ FD + + +++ MY+ G A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+F QM ++DLISWN ++AS+ G +AL L MI + ++ TF S L+A
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
E+GR L+V + + +V + + GE+ E+ +++ M +A W AL+
Sbjct: 361 FEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNALI 418
Query: 454 SG 455
G
Sbjct: 419 GG 420
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 301/587 (51%), Gaps = 38/587 (6%)
Query: 1 MIKTNLSAYGNSVGRIIALY---GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESP 57
M+KT L ++ +++ L + + A +FE + +N+++ +
Sbjct: 5 MVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDL 64
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
L +Y +M+ P++ TF LK+C + G +I + ++LG D + +S+
Sbjct: 65 VSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSL 124
Query: 118 LNLYVKCGKMNEAMVAFEK-------------------------------MQRKDLVCWS 146
+++Y + G++ +A F+ + +D+V W+
Sbjct: 125 ISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWN 184
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI G V N EA++ +K M + + DE ++ ++ ACA G G +H
Sbjct: 185 AMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDH 244
Query: 207 H-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
H +K+ + + +Y+K G +++AS +F+ +S ++V+W LI G+ L L L
Sbjct: 245 HGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLL 304
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD---FNLVLGTSVIDMY 322
EM G P+ V+++S L ACA +G + +G+ IH Y +R L TS+IDMY
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMY 364
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
+KCG A +F+ M + L SWN +I + +HG A LF +M + ++PD T
Sbjct: 365 AKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLV 424
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
LLSA SHSGL++ GR+ F + Y I P +HY CM+DLL AG +EA +I+ M
Sbjct: 425 GLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPM 484
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
EP +W +LL C H + E A+K++++ P++ G + L+SN +A +WE+VA +
Sbjct: 485 EPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARI 544
Query: 503 RKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
R+ + GMKKVPG S +E++ +H FI+ DK H Q +I +L+++
Sbjct: 545 REVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEM 591
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 302/560 (53%), Gaps = 4/560 (0%)
Query: 1 MIKTNLSAYGN--SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+I TN + N V +I LY + I+ AR LF+ + R V ++ +++ Y
Sbjct: 51 LIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVL 110
Query: 59 EVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
EVL L+ MI D +RP+ F + +C + G + A++ G +V +++
Sbjct: 111 EVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNAL 170
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ +Y + + AM + ++ D+ ++ +INGL+ NG P EA++ RM E I D
Sbjct: 171 ICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDN 230
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
V + C+ L D R GL VH R D V ++++DMY K G++ A VF
Sbjct: 231 VTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNR 290
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ N+V+W A+++ ++QNG L EM+ G P+ + L +CA I L G
Sbjct: 291 LQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHG 350
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H + F+ ++++G ++I+MYSK G A +F +M RD I+W+ +I H
Sbjct: 351 KLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHH 410
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G G EAL +F +M+ P + TF +LSA +H G V+EG Y+ + ++ + I+P +H
Sbjct: 411 GLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEH 470
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y C+V LL +AG ++EA + S + + W LLS CH H+ + +G+KVA+ VL+++
Sbjct: 471 YTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMD 530
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P D+G + L+SN +A ++W+ V +RK MR+ +KK PG S +E+ +H F+ E K+H
Sbjct: 531 PGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTH 590
Query: 537 NQYEDIVYVLKKLYLEMRAI 556
+ I +++L +R +
Sbjct: 591 PESNQIYEKVQELLTMIRPM 610
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 295/557 (52%), Gaps = 42/557 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+ +P R V ++N ++ A S+ E L + M + VR DS+T+T +L AC
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L+ G+++ + + D +V S+++ LY K G EA F + ++ V W+ +
Sbjct: 283 LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G + G E+V+ + +M+ E + D+ + LI C D G +H ++
Sbjct: 343 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFK-------------------------------N 237
V V SL+ MYAK +L A +F+
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 462
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLACAQIGFLKL 296
MS N++TW A++ + Q+G L + M S + PD V+ V+ CA +G KL
Sbjct: 463 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 522
Query: 297 GKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G I G TV+ L++ TS VI MYSKCG AR +FD + +D++SWN +I
Sbjct: 523 GDQIIGRTVK---VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 579
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y HG G++A+ +F +++ KPD+ ++ ++LS SHSGLV+EG+++FD+M + I P
Sbjct: 580 YSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISP 639
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+H++CMVDLL RAG + EA ++D M +P VW ALLS C H + E AK V
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHV 699
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
+L+ D G + L++ +A K ++ A +RK MR G+KK PGYS +EV+ ++H F +
Sbjct: 700 FELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKAD 759
Query: 533 DKSHNQYEDIVYVLKKL 549
D SH Q ++ + KKL
Sbjct: 760 DVSHPQ---VLAIRKKL 773
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 237/535 (44%), Gaps = 69/535 (12%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y + A +LF +P R V ++N+++ Y + L + M + D P++ T
Sbjct: 81 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 140
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN---------- 128
A+K+C +L + ++ + +D V +++++++V+CG ++
Sbjct: 141 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 200
Query: 129 ---------------------EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
A+ F+ M +D+V W+ M++ L +G+ REA+D
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 168 MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
M+ +G+ D + ACA L R+G +H IR ++D V ++LV++YAK+G
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 320
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
A VF ++ N V W LISGF Q G ++EL +M++ D +L + +
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 288 CAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVIDMYSKC--------------------- 325
C L LG+ +H ++ +V+ S+I MY+KC
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 440
Query: 326 ----------GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMV 374
G + AR FD M +++I+WN ++ +Y HG E+ L ++ M+ E V
Sbjct: 441 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 500
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD T+ +L + G + G V I T A ++ + ++ G + EA
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANA-VITMYSKCGRILEAR 559
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
K+ D ++ + + W A+++G H ++ +LK PD + A++S
Sbjct: 560 KVFDFLNVKD-IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 185/401 (46%), Gaps = 36/401 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY A+ +F L R + +I + + E + L+NQM E + D
Sbjct: 311 LVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLD 370
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ C S MDL +G ++ ++ G V V +S++++Y KC + A F
Sbjct: 371 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFR 430
Query: 136 KMQRKDLVCWSSMI----------------------NGLVFN---------GQPREAVDA 164
M KD+V W+SMI N + +N G + +
Sbjct: 431 FMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRM 490
Query: 165 YKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
YK M +E + D V + L + CADLG ++ G + G +++ L +D V +++ MY+
Sbjct: 491 YKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYS 550
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G + A VF ++ +IV+W A+I+G++Q+G+ +E+ ++ G +PD +S V+
Sbjct: 551 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 610
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR 341
L C+ G ++ GK R + + L + ++D+ + G + A+ L D M +
Sbjct: 611 VLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 670
Query: 342 DLIS-WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
W ++++ IHG+ E A L + + + PD ++
Sbjct: 671 PTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSY 710
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+V + MLN Y K G++++A+ F +M +D+ W+++++G + Q +++ + M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 170 KEGID-ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G + + +++C LG L + + D +V +LVDM+ + G +
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 229 DLASH-------------------------------VFKNMSRINIVTWGALISGFAQNG 257
DLAS +F +M ++V+W ++S +Q+G
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGT 316
L+++++MQS G DS + S+L ACA++ L+ GK +H +R + + +
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 309
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++++Y+K G A+ +F+ + R+ ++W V+I+ + +G E++ LF QM ++
Sbjct: 310 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 369
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D A+L+S + GR L + +IQ + ++ + A+ ++ A I
Sbjct: 370 DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAI 428
Query: 437 VDSMSTEPGLAVWVALLSG 455
M+ E + W ++++
Sbjct: 429 FRFMN-EKDIVSWTSMITA 446
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I+ ARK+F+ L ++ + ++N++I YS+ + + +++ ++K +PD
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 604
Query: 76 SSTFTVALKACVSLMDLKMGE---EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
++ L C ++ G+ ++ ++A + G + F S M++L + G + EA
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF--SCMVDLLGRAGHLTEAKD 662
Query: 133 AFEKMQRKDLV-CWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADL 190
+ M K W ++++ +G A A K + + + D+ ++M I A A
Sbjct: 663 LIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 722
Query: 191 GD 192
D
Sbjct: 723 SD 724
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 271/479 (56%), Gaps = 4/479 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ + + L++CV ++ G ++ + + G G D + + +++LY CG ++ A F
Sbjct: 62 NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGD 192
++M + ++ W+ +I +G A++ Y+ M G ++ D +++ACA L D
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH +R DV V L+DMYAK G +D A VF + + + V W ++I+
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
QNG L L M + G P V+LVSA+ A A G L G+ +HGY RR F
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI- 370
L TS++DMY+K G + AR LFDQ+ R+LISWN +I +G+HGH + A LF +M
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
E V PDH TF +LSA +H G+V+E + FDLMV+ Y I+P +HY C+VD+L +G
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++ M +P +W ALL+GC HK + E K+++L P+D G + L+SN +
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIY 481
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A KWEE A VRK M G+KK+ S +E+ G+ H F++ D SH + ++I L++L
Sbjct: 482 AQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERL 540
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 9/400 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDV 72
R++ LY + AR+LF+E+P +G V +N +I AY+R + LY +M+ +
Sbjct: 103 RLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSM 162
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD+ T+ LKAC +L+DL G E+ + + + DVFV + ++++Y KCG ++EA
Sbjct: 163 EPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWA 222
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ +D V W+SMI NG+P EA+ + M EGI V ++ I A AD G
Sbjct: 223 VFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGA 282
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HGY RR K++TSL+DMYAK+G + +A +F + +++W A+I G
Sbjct: 283 LPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICG 342
Query: 253 FAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
F +G A EL M++ PD ++ V L AC G ++ K + V +
Sbjct: 343 FGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIK 402
Query: 312 LVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQ 368
++ T ++D+ G A + M + D W ++ IH + E A +
Sbjct: 403 PMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHK 462
Query: 369 MIETMVKPDHSTFASLLSAL-SHSGLVEEGRYWFDLMVSK 407
+IE ++P+ + LLS + + SG EE LM ++
Sbjct: 463 LIE--LEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNR 500
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/593 (29%), Positives = 317/593 (53%), Gaps = 25/593 (4%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K++ +A G + +Y +++ A+ LF+ +YN++I YS++E F+ L
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+++++ + D + + +AC + L G +I+ A++ DV V ++ +++Y
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC + EA F++M+R+D V W+++I NG+ E + + M + I+ DE
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSR 240
+++AC G +G+ +H ++ + + V SL+DMY+K G ++ A + + R
Sbjct: 488 SILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 241 INI-------------------VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
N+ V+W ++ISG+ + L M G PD +
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ L CA + LGK IH +++ ++ + ++++DMYSKCG +R +F++
Sbjct: 607 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 666
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RD ++WN +I Y HG GEEA+ LF +MI +KP+H TF S+L A +H GL+++G +
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 726
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F +M Y + P HY+ MVD+L ++G+V+ AL+++ M E +W LL C H+
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 786
Query: 461 -KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
+ E+ +L+L+P D + L+SN +A WE+V+ +R+ MR +KK PG S
Sbjct: 787 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 846
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI--SSWLQGHMEEHEEH 570
VE+ ELH F++ DK+H ++E+I L +Y EM+ SS+++G E E+
Sbjct: 847 VELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 230/460 (50%), Gaps = 23/460 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S ++I Y ND+ A F +P+R V ++NS++ Y + + + ++ M +E
Sbjct: 116 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ D TF + LK C L D +G +I V +G DV S++L++Y K + E++
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + K+ V WS++I G V N A+ +K M+K + + ++++CA L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ R G +H ++++ D V+T+ +DMYAK ++ A +F N +N ++ A+I+
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G++Q L L + S G D +SL ACA + L G I+G ++
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + + IDMY KC + A +FD+M+ RD +SWN IIA++ +G G E L LF+ M+
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 371 ETMVKPDHSTFASLLSALS----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ ++PD TF S+L A + HS +V+ G M S + + +
Sbjct: 476 RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCS------L 523
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
+D+ ++ G +EEA KI ++ + L HN +
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 179/354 (50%), Gaps = 5/354 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + M+N Y K M +A F M +D+V W+SM++G + NG+ ++++ + M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+EGI+ D +++ C+ L D+ G+ +HG +R + DV ++L+DMYAK
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+ VF+ + N V+W A+I+G QN L L+ EMQ S L +CA
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L+LG +H + ++ F + ++ T+ +DMY+KC A+ LFD ++ + S+N
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SK 407
+I Y HG +AL LF +++ + + D + + + A + + EG + L + S
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ + A +D+ + + EA ++ D M ++ W A+++ + K
Sbjct: 413 LSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNGK 463
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 61/275 (22%)
Query: 288 CAQIGFLKLGKSIH------GYTVRRFDFNLVLG-------------------------- 315
CA+ G L+LGK H G+ F N +L
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+I+ YSK A + F+ M RD++SWN +++ Y +G +++ +F+ M ++
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D TFA +L S +E+ + +V + + ++D+ A+ E+
Sbjct: 178 FDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L++ + + ++ W A+++GC + S+ K K++ K+N
Sbjct: 235 LRVFQGIPEKNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVN----------------- 276
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHA 528
AGV +++ S ++ S + + G+LHA
Sbjct: 277 ------AGVSQSIYASVLRSCAALSELRLGGQLHA 305
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++ +Y D+ +R +FE+ R T+N++I Y+ E
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
+ L+ +MI E+++P+ TF L+AC + + G E + ++ YG D + S+M+
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFY-MMKRDYGLDPQLPHYSNMV 747
Query: 119 NLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMI 149
++ K GK+ A+ +M D V W +++
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLL 779
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 267/470 (56%), Gaps = 5/470 (1%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+K +++ + GYG + + ++ L + + F + D ++S+I
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
P V Y+RM + +I++CADL R G VH +++ LD
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
VQ +LV Y+K G ++ A VF M +IV W +L+SGF QNGLA +++ +M+
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC 330
GFEPDS + VS L ACAQ G + LG +H Y + D N+ LGT++I++YS+CG
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK-PDHSTFASLLSALS 389
AR +FD+M+ ++ +W +I++YG HG+G++A+ LF +M + P++ TF ++LSA +
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV---DSMSTEPGL 446
H+GLVEEGR + M Y++ P +H+ CMVD+L RAG ++EA K + D+
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
A+W A+L C H+ + +G ++AK+++ L PD+ G H ++SN +A+ K +EV+ +R M
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
++ ++K GYSV+EV + + F M D+SH + +I L+ L + I
Sbjct: 442 MRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 211/413 (51%), Gaps = 17/413 (4%)
Query: 6 LSAYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
++ YG S + ++I L I LF +PL +NS+I + S+ P +
Sbjct: 34 VTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVA 93
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
Y +M+ +V P + TFT +K+C L L++G+ + AV G+G D +V ++++ Y
Sbjct: 94 YYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYS 153
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG M A F++M K +V W+S+++G NG EA+ + +M++ G + D +
Sbjct: 154 KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ ACA G G VH Y I L+L+VK+ T+L+++Y++ G + A VF M N
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETN 273
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ W A+IS + +G +EL +M+ CG P++V+ V+ L ACA G ++ G+S++
Sbjct: 274 VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSRDLIS----WNVIIASY 353
+ + L+ G ++DM + G A Q+ + + W ++ +
Sbjct: 334 KRMTK--SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGAC 391
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL-SHSGLVEEGRYWFDLMV 405
+H + + + + ++I ++PD+ +LS + + SG +E + D M+
Sbjct: 392 KMHRNYDLGVEIAKRLIA--LEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMM 442
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 276/489 (56%), Gaps = 10/489 (2%)
Query: 74 PDSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P TF +ALK+ L L+ GE++ ++++L + V +S+L LY +CG ++ A
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M V W+++I + G REAV + G+ D + ++ ACA + D
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +V + + + V V T+ VD+Y K G + A VF M + V WGA++ G
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+A NG L+L + MQ+ G PD ++ AL AC ++G L LG+ +R D+
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDE 350
Query: 311 ---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N VLGT++IDMY+KCG + A +F QM+ +D+I WN +I G+ GH + A +L
Sbjct: 351 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIG 410
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QM ++ VK + +TF LL + +H+GL+++GR +F M Y I P +HY C+VDLL+RA
Sbjct: 411 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRA 470
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA +++D M + ALL GC H+ + E V ++++L P + G + ++S
Sbjct: 471 GLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLS 530
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N ++ +WE+ A +R M++ G++KVP S VE G++H F + DKSH + I L
Sbjct: 531 NIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 590
Query: 548 KLYLEMRAI 556
+L LEM+ +
Sbjct: 591 ELGLEMKTM 599
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 5/360 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + A+++F+E+P ++ ++I AY E + + +RPD
Sbjct: 159 LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPD 218
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC + DL GE +WR A + G VFV ++ ++LYVKCG+M +A F+
Sbjct: 219 SFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFD 278
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ KD V W +M+ G NG PREA+D + M+ EG+ D + G + AC LG
Sbjct: 279 KMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDL 338
Query: 196 GL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G ++ L+ V + T+L+DMYAK G A VF+ M + +I+ W A+I G
Sbjct: 339 GRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLG 397
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G + L+ +M+ G + + + + L +C G ++ G+ + + + +
Sbjct: 398 MTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 457
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ S+ G+ A L D M + + ++ IH + E A + Q+I
Sbjct: 458 EHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIR 517
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 290/535 (54%), Gaps = 1/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + +K+F+E+ ++ + ++ +I AY++ + + L++ M +RP+
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+ + L++C+ L++G++I + ++ V +++ N+YV+CG + A + F+
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V W+ ++ G + A++ + RM EG++ DE V +++ C L D
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ +V V T LVD Y K G ++ A F +S N V+W ALISGF+Q
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G +++ ++S G +S S ACA L +G HG ++R + + G
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427
Query: 316 TS-VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S ++ MYSKCG AR F+ + D ++W II+ Y HG+ EAL F +M V
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P+ TF ++L+A SHSGLV E + + M Y ++PT HY CM+D +RAG ++EAL
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEAL 547
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++++ M EP W +LL GC H +G+ A+ + +L+P D + L+ N ++
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KWEE VRK M + +KK S + V G++H F++ D+ H Q E I L++
Sbjct: 608 KWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEF 662
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 188/416 (45%), Gaps = 9/416 (2%)
Query: 48 IIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC---VSLMDLKMGEEIWRKAVE 104
+++ S++ E +M DV ++ +AC SL D ++ + R+ V+
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
G+ + + +L +Y CG + F++M K+LV W +I+ NG+ +A+
Sbjct: 119 NPSGS---IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ M+ GI + V M L+Q+C G +H + IR LN ++ V+T++ +MY +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR 235
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G L+ A VF M N VTW L+ G+ Q LEL M G E D
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295
Query: 285 LLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
L C + +G+ IH + V+ + + +GT ++D Y KCG A F ++ +
Sbjct: 296 LKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND 355
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
+SW+ +I+ + G E+ + +F + V + + S+ A + + G
Sbjct: 356 VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGD 415
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ + + A MV + ++ G ++ A + +S+ EP W A++SG H
Sbjct: 416 AIKRGLVSYLYGESA-MVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYH 469
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 297/529 (56%), Gaps = 6/529 (1%)
Query: 25 DIVSARKLFEELPLRGVDTYNSII--IAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVA 82
D+ A +F +L + +N ++ +A + K+ F V LY ++ ++ ++ T+
Sbjct: 76 DLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCV-ELYYKLKSLGLKANNFTYPFL 134
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
AC ++ L G+ + G D +V S++ +Y +CG+M A F++M +DL
Sbjct: 135 FIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDL 194
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+SMI+G G +EA+ + M++EG + DE+ ++ ++ AC DLGD G V G+
Sbjct: 195 VSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGF 254
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ + + ++ + ++L+DMY K G L A VF +M ++VTW A+I+G+AQNG +
Sbjct: 255 VLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEA 314
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
+ L M+ G PD V+++ L AC+ IG L LGK + + + ++ + +++IDM
Sbjct: 315 IVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDM 374
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET--MVKPDHS 379
Y+KCG A +F+ M ++ +SWN +I++ HG +EALSLF +M + V+P+
Sbjct: 375 YAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDI 434
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
TF +LSA H+GLV+EGR F+ M + + P +HY+CMVDL ARAG + EA ++
Sbjct: 435 TFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKK 494
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
M +P V +LL C + +GE+V + L++ + G + + S +A ++W++
Sbjct: 495 MPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDS 554
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
A +R MR+ G+ K PG S +++ +H F D HN +I +L +
Sbjct: 555 AKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLLNE 603
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 169/320 (52%), Gaps = 8/320 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ ARK+F+E+ R + ++NS+I YS+ E +GL+ +M +E PD
Sbjct: 169 LITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPD 228
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L DL +G + +E + ++GS+++++Y KCG + A F+
Sbjct: 229 EMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFD 288
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+V W+++I G NG EA+ + M++ G D V M+ ++ AC+ +G
Sbjct: 289 SMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDL 348
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G V ++ + L DV V ++L+DMYAK G LD A VF++M N V+W A+IS A
Sbjct: 349 GKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAF 408
Query: 256 NGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G A L L M + +P+ ++ + L AC G + G+ + + F LV
Sbjct: 409 HGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQL--FESMNLSFGLV 466
Query: 314 LGTSVIDMYSKCGVPSCARA 333
++ YS C V CARA
Sbjct: 467 ---PKVEHYS-CMVDLCARA 482
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 276/539 (51%), Gaps = 33/539 (6%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSL 89
+LF +P R +YN++I +S SP + LY +++E+ VRP T + + +L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK--------- 140
D +G + + + LG+G FVGS ++++Y K G + +A F++M+ K
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 141 ----------------------DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
D + W++M+ GL NG EA+D ++RM+ EG+ D+
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ AC L G +H Y R +V V ++LVDMY+K + LA VF+ M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ NI++W A+I G+ QN + + EMQ G +PD +L S + +CA + L+ G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 299 SIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
H V + + +++ +Y KCG A LFD+M D +SW ++ Y G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+E + LF +M+ +KPD TF +LSA S +GLVE+G +FD M + I P + HY
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CM+DL +R+G +EA + + M P W LLS C IG+ A+ +L+ +P
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDP 579
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ + L+ + A + +W EVA +R+ MR +KK PG S ++ ++H F +D+SH
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 7/340 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I A+ LF+ + R T+ +++ ++ E L ++ +M E V D TF L A
Sbjct: 228 IEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTA 287
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C +L L+ G++I Y ++VFVGS+++++Y KC + A F +M ++++ W
Sbjct: 288 CGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISW 347
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++MI G N EAV A+ M+ +GI D+ + +I +CA+L G H ++
Sbjct: 348 TAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALV 407
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L + V +LV +Y K G ++ A +F MS + V+W AL++G+AQ G A T++L
Sbjct: 408 SGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDL 467
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL----GTSVIDM 321
+M + G +PD V+ + L AC++ G ++ K + + D +V T +ID+
Sbjct: 468 FEKMLANGLKPDGVTFIGVLSACSRAGLVE--KGCDYFDSMQKDHGIVPIDDHYTCMIDL 525
Query: 322 YSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGE 360
YS+ G A QM S D W +++S + G+ E
Sbjct: 526 YSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 115/243 (47%), Gaps = 12/243 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A +F + R + ++ ++I+ Y + E + +++M + ++PD
Sbjct: 319 LVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPD 378
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +C +L L+ G + A+ G + V ++++ LY KCG + +A F+
Sbjct: 379 DFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFD 438
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V W++++ G G+ +E +D +++M G+ D V +G++ AC SR
Sbjct: 439 EMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC-----SRA 493
Query: 196 GLSVHGYSIRRHLNLDVKV------QTSLVDMYAKTGHLDLASHVFKNMSR-INIVTWGA 248
GL G + D + T ++D+Y+++G A K M + W
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 249 LIS 251
L+S
Sbjct: 554 LLS 556
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LYG I A +LF+E+ ++ +++ Y++ E + L+ +M+ ++PD
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPD 479
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYG----NDVFVGSSMLNLYVKCGKMNEAM 131
TF L AC ++ G + + +++ +G +D + + M++LY + G+ EA
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYF-DSMQKDHGIVPIDDHY--TCMIDLYSRSGRFKEAE 536
Query: 132 VAFEKM-QRKDLVCWSSMINGLVFNGQ 157
++M D W+++++ G
Sbjct: 537 EFIKQMPHSPDAFGWATLLSSCRLRGN 563
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 276/539 (51%), Gaps = 33/539 (6%)
Query: 31 KLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSL 89
+LF +P R +YN++I +S SP + LY +++E+ VRP T + + +L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK--------- 140
D +G + + + LG+G FVGS ++++Y K G + +A F++M+ K
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 141 ----------------------DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
D + W++M+ GL NG EA+D ++RM+ EG+ D+
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ AC L G +H Y R +V V ++LVDMY+K + LA VF+ M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ NI++W A+I G+ QN + + EMQ G +PD +L S + +CA + L+ G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 299 SIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
H V + + +++ +Y KCG A LFD+M D +SW ++ Y G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+E + LF +M+ +KPD TF +LSA S +GLVE+G +FD M + I P + HY
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CM+DL +R+G +EA + + M P W LLS C IG+ A+ +L+ +P
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDP 579
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ + L+ + A + +W EVA +R+ MR +KK PG S ++ ++H F +D+SH
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 7/340 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I A+ LF+ + R T+ +++ ++ E L ++ +M E V D TF L A
Sbjct: 228 IEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTA 287
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C +L L+ G++I Y ++VFVGS+++++Y KC + A F +M ++++ W
Sbjct: 288 CGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISW 347
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++MI G N EAV A+ M+ +GI D+ + +I +CA+L G H ++
Sbjct: 348 TAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALV 407
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L + V +LV +Y K G ++ A +F MS + V+W AL++G+AQ G A T++L
Sbjct: 408 SGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDL 467
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL----GTSVIDM 321
+M + G +PD V+ + L AC++ G ++ K + + D +V T +ID+
Sbjct: 468 FEKMLANGLKPDGVTFIGVLSACSRAGLVE--KGCDYFDSMQKDHGIVPIDDHYTCMIDL 525
Query: 322 YSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGE 360
YS+ G A QM S D W +++S + G+ E
Sbjct: 526 YSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 12/249 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A +F + R + ++ ++I+ Y + E + +++M + ++PD
Sbjct: 319 LVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPD 378
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +C +L L+ G + A+ G + V ++++ LY KCG + +A F+
Sbjct: 379 DFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFD 438
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V W++++ G G+ +E +D +++M G+ D V +G++ AC SR
Sbjct: 439 EMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC-----SRA 493
Query: 196 GLSVHGYSIRRHLNLDVKV------QTSLVDMYAKTGHLDLASHVFKNMSR-INIVTWGA 248
GL G + D + T ++D+Y+++G A K M + W
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 249 LISGFAQNG 257
L+S G
Sbjct: 554 LLSSCRLRG 562
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LYG I A +LF+E+ ++ +++ Y++ E + L+ +M+ ++PD
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPD 479
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYG----NDVFVGSSMLNLYVKCGKMNEAM 131
TF L AC ++ G + + +++ +G +D + + M++LY + G+ EA
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYF-DSMQKDHGIVPIDDHY--TCMIDLYSRSGRFKEAE 536
Query: 132 VAFEKM-QRKDLVCWSSMINGLVFNGQ 157
++M D W+++++ G
Sbjct: 537 EFIKQMPHSPDAFGWATLLSSCRLRGN 563
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 314/571 (54%), Gaps = 34/571 (5%)
Query: 16 IIALYGGKNDIVSARKLF-----EELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
++++Y + A+ LF ++P GV T+N+++ + E + + M+
Sbjct: 204 LLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVAR 263
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNE 129
VRPD TF AL AC L L +G E+ + + + FV S+++++Y ++
Sbjct: 264 GVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGA 323
Query: 130 AMVAFEKMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQA 186
A + F+ + + L W++MI G G +A++ + RM+ E G+ E + G++ +
Sbjct: 324 ARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPS 383
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
CA +VHGY ++R + + VQ +L+D+YA+ G +D A +F + ++V+W
Sbjct: 384 CARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSW 443
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCG------------------FEPDSVSLVSALLAC 288
LI+G G +L+ EMQ G P++++L++ L C
Sbjct: 444 NTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGC 503
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
A + GK IHGY VR D ++ +G++++DMY+KCG + +RA+FD++ R++I+WN
Sbjct: 504 AMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWN 563
Query: 348 VIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
V+I +YG+HG G+EA++LF +M+ + KP+ TF + L+A SHSG+V+ G F M
Sbjct: 564 VLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKR 623
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG---LAVWVALLSGCHNHKKFS 463
+ ++PT +AC VD+L RAG ++EA +I+ SM EPG ++ W + L C H+ +
Sbjct: 624 NHGVEPTPDLHACAVDILGRAGRLDEAYRIISSM--EPGEQQVSAWSSFLGACRLHRNVA 681
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+GE A+++ +L PD+ + L+ N ++ WE+ + VR MR+ G+ K PG S +E++
Sbjct: 682 LGEIAAERLFELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELD 741
Query: 524 GELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G +H F+ + +H + + + L+ MR
Sbjct: 742 GVIHRFMAGESAHPESTLVHAHMDALWERMR 772
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 195/398 (48%), Gaps = 19/398 (4%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAV--ELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
D A K+ +L L I A+ +L G V +++L Y +CG + A+
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG- 191
F+ M +D V ++S+I L + A+DA + M EG ++ ++ AC+ L
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAE 175
Query: 192 DSRFGLSVHGYSIRR-HLNLDVKVQ-TSLVDMYAKTGHLDLASHVFKNMSRIN-----IV 244
D R G H ++++ L+ D + +L+ MYA+ G +D A +F ++ + +V
Sbjct: 176 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVV 235
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
TW ++S Q+G G +E+L +M + G PD V+ SAL AC+Q+ L LG+ +H Y
Sbjct: 236 TWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYV 295
Query: 305 VRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQS--RDLISWNVIIASYGIHGHGE 360
++ D N + ++++DMY+ AR +FD + + R L WN +I Y G E
Sbjct: 296 LKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDE 355
Query: 361 EALSLFLQM-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+AL LF +M E V P +T A +L + + S G+ V K +
Sbjct: 356 DALELFARMETEAGVVPSETTIAGVLPSCARSETF-AGKEAVHGYVVKRGMADNPFVQNA 414
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAV-WVALLSGC 456
++DL AR G+++ A I ++ EP V W L++GC
Sbjct: 415 LMDLYARLGDMDAARWIFATI--EPRDVVSWNTLITGC 450
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 179/367 (48%), Gaps = 13/367 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y D+ +A LF+ +P R T+NS+I A L M+ E
Sbjct: 100 LLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLT 159
Query: 76 SSTFTVALKACVSLM-DLKMGEEIWRKAVELGY--GNDVFVGSSMLNLYVKCGKMNEAMV 132
S T L AC L DL++G E A++ G+ G++ F +++L++Y + G +++A
Sbjct: 160 SFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQT 219
Query: 133 AFEKMQRKD-----LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
F + D +V W++M++ LV +G+ EA++ M G+ D V + AC
Sbjct: 220 LFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPAC 279
Query: 188 ADLGDSRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS--RINIV 244
+ L G +H Y ++ L + V ++LVDMYA + A VF + +
Sbjct: 280 SQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLG 339
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
W A+I G+AQ GL LEL M++ G P ++ L +CA+ +++HGY
Sbjct: 340 LWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGY 399
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
V+R N + +++D+Y++ G AR +F ++ RD++SWN +I + GH +A
Sbjct: 400 VVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDA 459
Query: 363 LSLFLQM 369
L +M
Sbjct: 460 FQLVREM 466
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 198/423 (46%), Gaps = 35/423 (8%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPFEVL 61
+L+A ++ +Y + +AR +F+ +P R + +N++I Y++ + L
Sbjct: 299 ADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDAL 358
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ +M E V P +T L +C E + V+ G ++ FV +++++L
Sbjct: 359 ELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDL 418
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-------- 172
Y + G M+ A F ++ +D+V W+++I G V G R+A + M+++G
Sbjct: 419 YARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATE 478
Query: 173 ---IDADE-------VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
ADE + +M L+ CA L G +HGY++R L+ DV V ++LVDMY
Sbjct: 479 DGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMY 538
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSL 281
AK G L L+ VF + R N++TW LI + +GL + L M S +P+ V+
Sbjct: 539 AKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTF 598
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRRFDFNLV--LGTSVIDMYSKCGVPSCARALFDQMQ 339
++AL AC+ G + G + R L +D+ + G A + M+
Sbjct: 599 IAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSME 658
Query: 340 S--RDLISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL-SHSGL 393
+ + +W+ + + +H + GE A ++ +PD ++ LL + S +GL
Sbjct: 659 PGEQQVSAWSSFLGACRLHRNVALGEIAAERLFEL-----EPDEASHYVLLCNIYSAAGL 713
Query: 394 VEE 396
E+
Sbjct: 714 WEK 716
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 300/546 (54%), Gaps = 7/546 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+LYG + A+ L E + R V +N+++ A ++ +E + L +M E +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T+ L+AC +L L G EI + + G +V VG+S++ +Y KCG+ AM F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E M RKD V W+++IN V N + ++A++ + M+ EG+ ++E ++ L++AC L D +
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480
Query: 195 FGLSVHGYSIRRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+H + + V S+V+MYA+ G L A F ++ +V W +++ +
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAY 540
Query: 254 AQ--NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FD 309
AQ +G + EM++ G +P V+ VSAL ACA + L+ G+S+H +
Sbjct: 541 AQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVE 600
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+LVLG ++I+MY KCG PS A+ +FDQM + LISWN +I +Y +GH EALS +M
Sbjct: 601 TSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEM 660
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ PD T S+L LSH+GL+E G F + + ++P+ C+VDLLAR G
Sbjct: 661 LLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGF 720
Query: 430 VEEALK-IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++ A + I+ S + + W+ LL+ C ++ G + A++V +L P G +++N
Sbjct: 721 LDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLAN 780
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+A +W + + +RK M + +KK PG S +E++G +H FI + H + +I L+K
Sbjct: 781 LYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEK 840
Query: 549 LYLEMR 554
L L MR
Sbjct: 841 LTLRMR 846
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 219/441 (49%), Gaps = 3/441 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG D+ A K+F+ + LR V ++ +++ Y++ + L ++M E V+P+
Sbjct: 99 LVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPN 158
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + C L L +G +I + + G D +G++++++Y CG ++ F
Sbjct: 159 QVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFS 218
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + ++ W++MI G NGQ E + +++M EG+ A+EV M +++ C +L +
Sbjct: 219 RMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKE 278
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G + + + TSL+ +Y + G LD A + ++M + ++V W A+++ AQ
Sbjct: 279 GEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQ 338
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFNLV 313
NG + LL M GF + V+ +S L ACA + L G+ IH + +
Sbjct: 339 NGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVA 398
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G SVI MY KCG A ++F+ M +D +SWN +I + + ++AL LF M
Sbjct: 399 VGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEG 458
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++ + T SLL A ++ R + + +V++ AR G + +A
Sbjct: 459 LRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDA 518
Query: 434 LKIVDSMSTEPGLAVWVALLS 454
K DS+ E GL W +L+
Sbjct: 519 KKAFDSLE-EKGLVAWSIILA 538
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 218/445 (48%), Gaps = 2/445 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+YG + A +F+ + + V ++ ++ AYS+ E L L+ +M E RPD
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F +AL AC + +L G +I V G +++ + +S++N+Y KC + A F+ M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D+V W++M+ NG +A++ RM EG+ ++V + ++ CA L G
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I L D + +LV MY G D VF M + +++ W +I+G +QNG
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L + +M G + + V+ +S + C + +K G+ I + F + +L TS
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+I +Y +CG+ A+ L + M RD+++WN ++ + +G EA+ L +M +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T+ S+L A ++ + +GR ++ +Q ++ + + G+ E A+ +
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKF 462
++M + ++ W A+++ + KF
Sbjct: 421 EAMPRKDDVS-WNAVINASVGNSKF 444
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 225/470 (47%), Gaps = 8/470 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + +F + V + ++I S+ E L ++ +M E V+ +
Sbjct: 200 LVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKAN 259
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ ++ C +L +K GE I + +E + + + +S+++LY +CG ++ A E
Sbjct: 260 EVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLE 319
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D+V W++M+ NG EA+ +RM EG A++V + +++ACA+L
Sbjct: 320 HMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQ 379
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H + L +V V S++ MY K G + A VF+ M R + V+W A+I+
Sbjct: 380 GREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASV 439
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NL 312
N LEL M+ G + +L+S L AC + LKL + IH +
Sbjct: 440 GNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNST 499
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH--GHGEEALSLFLQMI 370
+G SV++MY++CG A+ FD ++ + L++W++I+A+Y G G A F +M
Sbjct: 500 AVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEME 559
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+KP TF S L A + +E GR + ++ + ++++ + G
Sbjct: 560 AEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSP 619
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG-CHNHKKFSIGEKVAKKVLK-LNPD 478
+A + D M E L W +L+ HN + + +L+ +PD
Sbjct: 620 SDAKLVFDQM-PEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPD 668
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 3/253 (1%)
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
MY K + A VF +S N+ +W +++ ++QNG LEL MQ G PD V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
V AL ACA G L G+ IH V N+++ S+++MY KC CA +FD M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
RD++SW ++A Y +G +AL +M VKP+ TF +++ + L++ GR
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++++ ++P +V + G ++ +K V S + + +W +++GC +
Sbjct: 181 IHHRIINE-GLEPDGILGNALVHMYGSCGSFDD-MKSVFSRMGQSSVLLWTTMIAGCSQN 238
Query: 460 KKFSIGEKVAKKV 472
++ G V +K+
Sbjct: 239 GQYEEGLLVFRKM 251
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 264/487 (54%)
Query: 47 IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
+I + R + E ++ QM V+P+ TF D+ + I V+ G
Sbjct: 334 MISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSG 393
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+ V +++ +YVK G + +A++AF+ MQ D+ W+++++G + +K
Sbjct: 394 FSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFK 453
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+ EG+ A++ +G+++ C L D RFG VH ++ D V L+DMY + G
Sbjct: 454 ELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAG 513
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
A VF + ++ +W ++S +A+ +E M P+ +L ++L
Sbjct: 514 CFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLS 573
Query: 287 ACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C+ + L G +H YT++ + V+ ++++DMY KCG + A LFD+ + DL+ W
Sbjct: 574 VCSDLACLGSGLQLHSYTIKSGWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEW 633
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N II Y HGHG +AL F +MI+ PD TF +LSA SH+GL++EGR +F L+ S
Sbjct: 634 NTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSS 693
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
Y I PT +HYACMVD+LA+AG++ EA +++ M P ++W +L C H I E
Sbjct: 694 VYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAE 753
Query: 467 KVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGEL 526
+ A+K+ + PDD+ L+SN +A ++W +VA +R + G+KK PG S +E+NG+L
Sbjct: 754 RAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKL 813
Query: 527 HAFIMED 533
H F+ +D
Sbjct: 814 HVFLSQD 820
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 199/397 (50%), Gaps = 3/397 (0%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
++ AL+ C + L+ G+ + + + G D F+ S+LN+Y KCG++ +A F+ M
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+D+V W++M++ + G A+ + M +EG+ + + ++AC D F
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
VH +++ D V +SLV+ Y G +D+A + + V+W AL++ +A++G
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
+ + ++ G E +L + L C ++G K G+++HG ++R + + VL
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNN 301
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+I+MYSKC A +F ++ D++ +++I+ + H EA +F+QM + VKP
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ TF L S +G V R +V K T+ +V + + G V++A+
Sbjct: 362 NQYTFVGLAIVASRTGDVNLCRSIHAHIV-KSGFSRTKGVCDAIVGMYVKTGAVQDAILA 420
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL 473
D M P +A W LLSG ++ G ++ K+++
Sbjct: 421 FDLMQG-PDIASWNTLLSGFYSGNNCEHGLRIFKELI 456
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 218/464 (46%), Gaps = 28/464 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR +F+ +P R V + +++ A + L L+ +M +E V P+
Sbjct: 101 LLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPN 160
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ALKAC DL ++ +AV+L D +V SS++ YV CG+++ A A
Sbjct: 161 GFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALL 220
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V W++++N +G + + + ++ + G + + + +++ C +LG ++
Sbjct: 221 DSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKS 280
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +VHG I+R L D + L++MY+K + A VF + ++V +IS F +
Sbjct: 281 GQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDR 340
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ +A ++ M+M G +P+ + V + ++ G + L +SIH + V+ F +
Sbjct: 341 HDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGV 400
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++ MY K G A FD MQ D+ SWN +++ + + E L +F ++I V
Sbjct: 401 CDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGV 460
Query: 375 KPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+ T+ +L + H+ +++ G + D VSK ++D+
Sbjct: 461 LANKYTYVGILRCCTSLMDLRFGCQVHACVLKSG-FQGDYDVSKM-----------LLDM 508
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+AG A + D + E + W ++S + K GEK
Sbjct: 509 YVQAGCFTNARLVFDRLK-ERDVFSWTVVMS---TYAKTDEGEK 548
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 191/394 (48%), Gaps = 16/394 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ S I+ +Y + A F+ + + ++N+++ + +
Sbjct: 389 IVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHG 448
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ ++I E V + T+ L+ C SLMDL+ G ++ ++ G+ D V +L++
Sbjct: 449 LRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDM 508
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
YV+ G A + F++++ +D+ W+ +++ + +A++ ++ M +E ++ +
Sbjct: 509 YVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATL 568
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ C+DL GL +H Y+I+ N V V ++LVDMY K G+L A +F
Sbjct: 569 ATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDT 627
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK-- 298
++V W +I G+AQ+G LE EM G PD ++ V L AC+ G L G+
Sbjct: 628 HDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRY 687
Query: 299 -----SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIAS 352
S++G T L ++D+ +K G + A +L ++M + D W I+ +
Sbjct: 688 FKLLSSVYGITP-----TLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGA 742
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
+HG+ E A ++ E+ +PD + LLS
Sbjct: 743 CRMHGNIEIAERAAEKLFES--QPDDISSCILLS 774
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/501 (33%), Positives = 271/501 (54%), Gaps = 9/501 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T L+ C L +G+ A+ G D + ++NLY KCG+ + A F
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M + ++ W++MI G N + EA+ + RM +EG E + + ACA ++
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACA----AK 170
Query: 195 FGL----SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ + +H +I+ L+ V T+ +D+YAK + A VF+NM VTW +L
Sbjct: 171 YAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLF 230
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+GF QNGL L L Q G + ++ S L CA + + G +H V+ F
Sbjct: 231 AGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFH 290
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
NL + TS++D+Y+KCG + +F M+ ++++ WN +IAS+ H H EA+ LF +M
Sbjct: 291 RNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKM 350
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ + P+ T+ S+LSA SH+GLVEEGR++F+L++S +P HY+CMVD+L R+G+
Sbjct: 351 QQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGK 410
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+EA K++D M EP ++W +LL HK + A+++ +L P++ G H L+SN
Sbjct: 411 TDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNV 470
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A WE V RK +R SG KK G S +E G++H F+ ++ H D+ L+++
Sbjct: 471 YAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEI 530
Query: 550 YLEMRAISSWLQGHMEEHEEH 570
Y EMR IS + H+ H
Sbjct: 531 YHEMRKISHRANTQCDLHDVH 551
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 179/346 (51%), Gaps = 7/346 (2%)
Query: 16 IIALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I LY G+ND AR++F+ + +R + ++N++I Y+ E L L+++M +E +
Sbjct: 97 LINLYTKCGQND--CARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQ 154
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
T + L AC + + +++ A++L + FVG++ L++Y KC + +A
Sbjct: 155 MTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWV 214
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE M K V WSS+ G V NG E + ++ ++EG+ E + ++ CA L
Sbjct: 215 FENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALI 274
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH ++ + ++ V TSLVD+YAK G ++ + VF +M N+V W A+I+ F
Sbjct: 275 IEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASF 334
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFN 311
+++ + + L +MQ G P+ V+ +S L AC+ G ++ G+ + R + N
Sbjct: 335 SRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPN 394
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
++ + ++D+ + G A L D+M S W ++ S IH
Sbjct: 395 VLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIH 440
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 285/544 (52%), Gaps = 37/544 (6%)
Query: 46 SIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL 105
+++ + R P L L+ +++++ + D+ T A+KA + E I A +
Sbjct: 102 TMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATT--SSSPAEAIHCVAFKR 159
Query: 106 GY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
G+ G V VG++++++Y + +A F++M +D+V W+++++G G P EA
Sbjct: 160 GFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRV 219
Query: 165 YKRMKKEGID-ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM-- 221
+ RM G +EV ++ A +G G VH + + + V ++ +LVDM
Sbjct: 220 FCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFG 279
Query: 222 -----------------------------YAKTGHLDLASHVFKNMSRINIVTWGALISG 252
YAK G L+ A +FK + N V+W +++
Sbjct: 280 KCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAA 339
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTV-RRFDF 310
++Q L + + +M + G EP +LVS L ACAQ+G L +G+ ++ Y V + +
Sbjct: 340 YSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVEL 399
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ L + IDM++KCG A LF M+ ++++SWN +I ++ +HG EEAL LF +
Sbjct: 400 TVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFK 459
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ PD T+ +LSA SHSGLV EGRY F M Y I+P +HYACM+DLL + G +
Sbjct: 460 AIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLL 519
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EEA ++ SM A W ALL+ C H IG+ A K++ L+P D GI+ L+S +
Sbjct: 520 EEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIY 579
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
A + KW +V +R MR G+KK PG S +EV+G+ H F+ D SH EDI L+ +Y
Sbjct: 580 ASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENIY 639
Query: 551 LEMR 554
L +
Sbjct: 640 LHSK 643
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 40/331 (12%)
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++M+ G + G+P A+ ++R+ ++ + AD ++ ++A S ++H + +
Sbjct: 101 ATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATT--SSSPAEAIHCVAFK 158
Query: 206 R-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
R + V V +LV MYA + L A +F M+ ++V+W L+ G+A+ GL
Sbjct: 159 RGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWR 218
Query: 265 LLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVID 320
+ M G P+ V+LV+A A QIG L LG+ +H V R NL +++D
Sbjct: 219 VFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNL--ENALVD 276
Query: 321 MYSKCGVPSCARALFDQM-------------------------------QSRDLISWNVI 349
M+ KCG + A+ +FD M +R+ +SW+ +
Sbjct: 277 MFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCM 336
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
+A+Y EEA+ +F MI V+P +T S+LSA + G ++ GR +D + +K
Sbjct: 337 VAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHK 396
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
++ T +D+ A+ G+V A ++ +M
Sbjct: 397 VELTVNLSNAFIDMFAKCGDVGAASRLFRNM 427
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 170/386 (44%), Gaps = 46/386 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + ARKLF+E+ R V ++ +++ Y+R P E ++ +M+ P
Sbjct: 172 LVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWP 231
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELG--------------YG------------ 108
+ T A A + L +G + + VE G +G
Sbjct: 232 NEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIF 291
Query: 109 -----NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
DV+ +SM++ Y KCG + A F+++ ++ V WS M+ P EA+
Sbjct: 292 DGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMR 351
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH-GYSIRRHLNLDVKVQTSLVDMY 222
+ M G++ + ++ ++ ACA LG G ++ Y + + L V + + +DM+
Sbjct: 352 IFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMF 411
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
AK G + AS +F+NM N+V+W +I A +G + L L + ++ G PD ++ +
Sbjct: 412 AKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYI 471
Query: 283 SALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALF 335
L AC+ G + G K ++G R + +ID+ K G+ A +
Sbjct: 472 GVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHY-----ACMIDLLGKVGLLEEAFEVA 526
Query: 336 DQMQ-SRDLISWNVIIASYGIHGHGE 360
M D W ++ + +HG+ E
Sbjct: 527 RSMPVGADEAGWGALLNACRMHGNVE 552
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N ++ GF + G L L + D+ ++V A+ A ++IH
Sbjct: 96 NAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSS--SPAEAIH 153
Query: 302 GYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
+R ++++G +++ MY+ AR LFD+M RD++SW ++ Y G
Sbjct: 154 CVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLP 213
Query: 360 EEALSLFLQMIETMVK-PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+EA +F +M+ P+ T + SA GL+ GR +V ++ +
Sbjct: 214 DEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVES-GVRMSVNLEN 272
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ + G V A +I D M + + W +++S
Sbjct: 273 ALVDMFGKCGCVASAKEIFDGMPIK-DVYSWTSMVSA 308
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 288/528 (54%), Gaps = 1/528 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A +F + + + +++ YS + P ++++M +P+ T LKA
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
V L + +G+ I A++ + VG ++L++Y KCG + +A +AFE + D++
Sbjct: 273 AVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S MI+ + Q +A + + R+ + + +E + ++QAC ++ FG +H ++I+
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
D+ V +L+D YAK +D + +F ++ N V+W ++ GF+Q+GL L +
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EMQ+ V+ S L ACA ++ IH + F+ + V+G S+ID Y+K
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F + RD+ISWN II+ Y +HG +AL LF +M ++ V+ + TF +L
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LS S +GLV G FD M + I+P+ +HY C+V LL RAG + +AL+ + + + P
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 632
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW ALLS C HK ++G A+K+L++ P D + L+SN +A ++VA +RK
Sbjct: 633 SAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRK 692
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+MR G++KVPG S VE+ GE+HAF + H I +L+ L L+
Sbjct: 693 SMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLK 740
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 230/475 (48%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + SAR+LF+ +P R + ++ +++ A++++ L+ ++ E +
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T LK +++ + + A +LG+ ++ FVGS +++ Y C +++A F
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ RKD V W++M++ N P A + +M+ G + + +++A L
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG +I+ + + V +L+DMYAK G + A F+ + +++ +IS +AQ
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
+ EL + + P+ SL S L AC + L GK IH + ++ + +L +
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++D Y+KC + +F ++ + +SWN I+ + G GEEALS+F +M +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
T++S+L A + + + + K ++D A+ G + +AL
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQ-IHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL 520
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
K+ + E + W A++SG H + + ++ ++ K N +D+ AL+S
Sbjct: 521 KVFQHL-MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLS 574
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 152/287 (52%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y DI AR FE +P V + +I Y++ + L+ ++++ V
Sbjct: 302 GALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVL 361
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ + + L+AC +++ L G++I A+++G+ +D+FVG+++++ Y KC M+ ++
Sbjct: 362 PNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKI 421
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F ++ + V W++++ G +G EA+ + M+ + +V +++ACA
Sbjct: 422 FSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASI 481
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R +H + N D + SL+D YAK G++ A VF+++ +I++W A+ISG+
Sbjct: 482 RHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGY 541
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
A +G A LEL M E + ++ V+ L C+ G + G S+
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSL 588
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 185/374 (49%), Gaps = 10/374 (2%)
Query: 74 PDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELG-YGN-DVFVGSSMLNLYVKCGKMNE 129
P +F A L+ C++ D + G + V G G D+F + +LN+Y K G +
Sbjct: 55 PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F++M +++V + +++ G A ++R++ EG + ++ V+ +++
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ + VH + + + + V + L+D Y+ + A HVF + R + V W A+
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF- 308
+S +++N + + +M+ G +P+ +L S L A + + LGK IHG ++
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D +G +++DMY+KCG AR F+ + D+I + +I+ Y E+A LFL+
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLAR 426
++ + V P+ + +S+L A ++ ++ G+ + + KI + ++D A+
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAI---KIGHESDLFVGNALMDFYAK 411
Query: 427 AGEVEEALKIVDSM 440
+++ +LKI S+
Sbjct: 412 CNDMDSSLKIFSSL 425
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/593 (29%), Positives = 317/593 (53%), Gaps = 25/593 (4%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K++ +A G + +Y +++ A+ LF+ +YN++I YS++E F+ L
Sbjct: 266 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 325
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+++++ + D + + +AC + L G +I+ A++ DV V ++ +++Y
Sbjct: 326 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 385
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC + EA F++M+R+D V W+++I NG+ E + + M + I+ DE
Sbjct: 386 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 445
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSR 240
+++AC G +G+ +H ++ + + V SL+DMY+K G ++ A + + R
Sbjct: 446 SILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 504
Query: 241 INI-------------------VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
N+ V+W ++ISG+ + L M G PD +
Sbjct: 505 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 564
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ L CA + LGK IH +++ ++ + ++++DMYSKCG +R +F++
Sbjct: 565 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 624
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RD ++WN +I Y HG GEEA+ LF +MI +KP+H TF S+L A +H GL+++G +
Sbjct: 625 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 684
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F +M Y + P HY+ MVD+L ++G+V+ AL+++ M E +W LL C H+
Sbjct: 685 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 744
Query: 461 -KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
+ E+ +L+L+P D + L+SN +A WE+V+ +R+ MR +KK PG S
Sbjct: 745 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 804
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI--SSWLQGHMEEHEEH 570
VE+ ELH F++ DK+H ++E+I L +Y EM+ SS+++G E E+
Sbjct: 805 VELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQ 857
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 230/460 (50%), Gaps = 23/460 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S ++I Y ND+ A F +P+R V ++NS++ Y + + + ++ M +E
Sbjct: 74 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 133
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ D TF + LK C L D +G +I V +G DV S++L++Y K + E++
Sbjct: 134 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + K+ V WS++I G V N A+ +K M+K + + ++++CA L
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ R G +H ++++ D V+T+ +DMYAK ++ A +F N +N ++ A+I+
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 313
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G++Q L L + S G D +SL ACA + L G I+G ++
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 373
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + + IDMY KC + A +FD+M+ RD +SWN IIA++ +G G E L LF+ M+
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 371 ETMVKPDHSTFASLLSALS----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ ++PD TF S+L A + HS +V+ G M S + + +
Sbjct: 434 RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCS------L 481
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
+D+ ++ G +EEA KI ++ + L HN +
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 521
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 179/354 (50%), Gaps = 5/354 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + M+N Y K M +A F M +D+V W+SM++G + NG+ ++++ + M
Sbjct: 71 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+EGI+ D +++ C+ L D+ G+ +HG +R + DV ++L+DMYAK
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+ VF+ + N V+W A+I+G QN L L+ EMQ S L +CA
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ L+LG +H + ++ F + ++ T+ +DMY+KC A+ LFD ++ + S+N
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 310
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SK 407
+I Y HG +AL LF +++ + + D + + + A + + EG + L + S
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 370
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
+ + A +D+ + + EA ++ D M ++ W A+++ + K
Sbjct: 371 LSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNGK 421
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 61/275 (22%)
Query: 288 CAQIGFLKLGKSIH------GYTVRRFDFNLVLG-------------------------- 315
CA+ G L+LGK H G+ F N +L
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+I+ YSK A + F+ M RD++SWN +++ Y +G +++ +F+ M ++
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D TFA +L S +E+ + +V + + ++D+ A+ E+
Sbjct: 136 FDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 192
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L++ + + ++ W A+++GC + S+ K K++ K+N
Sbjct: 193 LRVFQGIPEKNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVN----------------- 234
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHA 528
AGV +++ S ++ S + + G+LHA
Sbjct: 235 ------AGVSQSIYASVLRSCAALSELRLGGQLHA 263
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++ +Y D+ +R +FE+ R T+N++I Y+ E
Sbjct: 587 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 646
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
+ L+ +MI E+++P+ TF L+AC + + G E + ++ YG D + S+M+
Sbjct: 647 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFY-MMKRDYGLDPQLPHYSNMV 705
Query: 119 NLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMI 149
++ K GK+ A+ +M D V W +++
Sbjct: 706 DILGKSGKVKRALELIREMPFEADDVIWRTLL 737
>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Brachypodium distachyon]
Length = 924
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 300/522 (57%), Gaps = 16/522 (3%)
Query: 7 SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES-PFEVLGLYN 65
S+ GNS ++ LY +D +A LF +P+R + ++N+++ YSR +S E ++
Sbjct: 410 SSLGNS---LLGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFR 466
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+++ E + +T + +C DL+ G+ + ++ G+ + V V ++++++Y+ CG
Sbjct: 467 ELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCG 526
Query: 126 KMNEAMVAF----EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVM 180
+++VAF M D++ W++ + G V NG R A++A++ M ++ D + +
Sbjct: 527 ---DSLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITL 583
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ AC L G S+H +++R L +++V+ +L+ MY + + A +F ++
Sbjct: 584 VSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAELIFYSLGD 643
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+ +W ++SGFAQN L+ +M+ F P+ + VS + AC Q+ ++ GKSI
Sbjct: 644 RNLCSWNCMVSGFAQNNDGRRALQFYQKMEK--FVPNEMCTVSIICACTQLRDVRHGKSI 701
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ V+ N+ L S++DMYSKCG A +F+ + + WN +I+++G HGHG
Sbjct: 702 HGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIACWNSMISAFGFHGHG 761
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
++ LF MI + +K STF +LLSA SH+GL +EG +++LM K+ I PT +H+ C
Sbjct: 762 LRSIELFCSMIHSGMKATRSTFIALLSACSHAGLTDEGLKYYNLMSEKFGITPTPEHHVC 821
Query: 420 MVDLLARAGEVEEALKIVDSMS-TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
+VD+L RAG ++EA K V+S+ ++ VW ALLS C N + +GE +A+++L L P+
Sbjct: 822 IVDMLGRAGRLQEAHKFVESLPKSKEAHGVWGALLSACSNKSELRMGEAIARQLLCLEPE 881
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+ G + +SN +A + W VR ++ + K G+S+V
Sbjct: 882 NSGYYVTISNLYAYQDMWGGAVQVRDILQDKRLMKPHGHSIV 923
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 222/482 (46%), Gaps = 22/482 (4%)
Query: 21 GGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP---DSS 77
GG +D +A LF E V +N++I A +R + + L+ +M VR DS+
Sbjct: 114 GGDHDARAALVLFHEAEDPDVILWNAVIGALTRACRLGDAVALFRRM--AGVRGEAFDST 171
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
T V L +L +G + AV+ D+ + ++++++Y KCG ++ F M
Sbjct: 172 TVVVMLSGASRAGELDLGMALHAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSM 231
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL-GDSRFG 196
D W+S+ G FNG + ++ M + + ADEV + +I A + G FG
Sbjct: 232 PCWDTASWNSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSSVISASSRAEGLFSFG 291
Query: 197 LSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
SVHG ++ V SL+ Y + G + A VF + + N V+W +I G
Sbjct: 292 ESVHGCIVKLGYEDTAPCSVANSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLM 351
Query: 255 QNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL- 312
+N AG L + EM S C +PD +LV+ +L+C G L GK+IHGY R+ F++
Sbjct: 352 ENEKAGEALAVFREMLSEC--QPDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVE 409
Query: 313 -VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH-GEEALSLFLQMI 370
LG S++ +Y KC A LF M RDLISWN +++ Y EEA ++F +++
Sbjct: 410 SSLGNSLLGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELL 469
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL--MVSKYKIQPTEKHYACMVDLLARAG 428
+ T ++L+ + E+ R+ + V KY ++ + G
Sbjct: 470 SEGLS---CTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCG 526
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHN---HKKFSIGEKVAKKVLKLNPDDLGIHAL 485
+ A ++ S+ + W + GC H+ + L LNPD + + ++
Sbjct: 527 DSLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSV 586
Query: 486 VS 487
+S
Sbjct: 587 LS 588
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 159/315 (50%), Gaps = 15/315 (4%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE-----AMVAFEKMQRKDLVCWSSMIN 150
E + A++ G D V +S+L Y +C + A+V F + + D++ W+++I
Sbjct: 83 ESLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDPDVILWNAVIG 142
Query: 151 GLVFNGQPREAVDAYKRM---KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
L + +AV ++RM + E D+ VV+M + + G+ G+++H +++R
Sbjct: 143 ALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVM--LSGASRAGELDLGMALHAAAVKRR 200
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+ D+ + +LVDMYAK G + VF +M + +W ++ G NGL+ +
Sbjct: 201 LDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYFR 260
Query: 268 EMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYS 323
EM + D V+L S + A ++ G G+S+HG V+ + S+I Y
Sbjct: 261 EMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLITFYF 320
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
+ G P A +F ++ ++ +SWNV+I + EAL++F +M+ + +PD +T +
Sbjct: 321 EFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREML-SECQPDFATLVA 379
Query: 384 LLSALSHSGLVEEGR 398
++ + GL+ EG+
Sbjct: 380 VILSCGDQGLLCEGK 394
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 262/462 (56%), Gaps = 8/462 (1%)
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G M+ A F++M + W++++ G V NG P +AV Y +M+ G+ D +I
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
+ACA+L + GL +HG+ ++ L V+T L+ MY K G L A +F +M ++V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W ALI+ Q G + L+ EM G +PDSV++VSAL AC +G L+ G+ I+ +
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
D N+++ + +DM +KCG A LFD+M R++ISW+ +I Y ++G E+AL
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK--YKIQPTEKHYACMV 421
+LF +M V+P++ TF ++LSA SH+G V EG +F+ M IQP ++HYACMV
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
DLL R+G +EEA + M E +W ALL C H+ +G+ VA + +L P+
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
H L+SN +A +W V VR+ M+K G +KV YS VE NGE+H DKSH Q
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502
Query: 542 IVYVLKKLYLEMRAI-----SSWLQGHMEEHEEHDPLSTAAQ 578
I+ L+ L +M+++ + + +E+ E+ LST ++
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSE 544
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 148/288 (51%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ AR+LF+E+ +N+I+ Y + P + + +Y +M VRPD TF +K
Sbjct: 84 DMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIK 143
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC L +L G + V+ G V + ++ +YVK G++ A F M +DLV
Sbjct: 144 ACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVA 203
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++I V G +A+ +++ M GI D V ++ + AC LG G ++ ++
Sbjct: 204 WNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAR 263
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
++ ++ V + +DM AK G +D A ++F M + N+++W +I G+A NG + L
Sbjct: 264 EEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALA 323
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
L M++ G +P+ V+ ++ L AC+ G + G + + D N+
Sbjct: 324 LFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNI 371
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 287/543 (52%), Gaps = 5/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y K + AR LF+E+P R V + ++I Y+ +++M K+ P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRSPN 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG-KMNEAMVAF 134
T + LK+C ++ L G + V+LG ++V ++++N+Y C M A + F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIF 170
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ K+ V W+++I G G + YK+M E D + ++A A +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVT 230
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++R ++ V S++D Y + G+L A F M +++TW LIS
Sbjct: 231 TGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELE 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++ + L + +S GF P+ + S + ACA I L G+ +HG RR F+ N+
Sbjct: 291 RSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVE 349
Query: 314 LGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY+KCG +P R + + R+L+SW ++ YG HG+G EA+ LF +M+ +
Sbjct: 350 LANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++PD F ++LSA H+GLVE+G +F++M S+Y I P Y C+VDLL RAG++ E
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFS-IGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A ++V+ M +P + W A+L C HK I AKKV++L P +G + ++S +A
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYA 529
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
E KW E A VRK MR G KK G S +EV ++ +F + DK + VL L
Sbjct: 530 AEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNASSVYSVLGLLIE 589
Query: 552 EMR 554
E +
Sbjct: 590 ETK 592
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ ++++ Y + G + EA F++M +D+V W++MI G + A + + M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG-HLDLA 231
+E + ++++C ++ +G VHG ++ + + V +L++MYA ++ A
Sbjct: 107 RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAA 166
Query: 232 SHVFKNMSRINIVTWGALISGFAQ--NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+F+++ N VTW LI+GF +G+ G + M +++ P +++ A+ A A
Sbjct: 167 FLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITI--AVRASA 224
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
I + GK IH V+R F NL + S++D Y +CG S A+ F +M+ +DLI+WN
Sbjct: 225 SIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNT 284
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I+ EAL +F + P+ TF SL++A ++ + G+ + +
Sbjct: 285 LISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRG 343
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ E A ++D+ A+ G++ ++ ++ + L W +++ G +H + ++
Sbjct: 344 FNKNVELANA-LIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 469 AKKVLK--LNPDDLGIHALVS 487
K++ + PD + A++S
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLS 423
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L T++I Y + G+ AR+LFD+M RD+++W +I Y + A F +M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQ 105
Query: 373 MVKPDHSTFASLLSALSHSGLVEEG 397
P+ T +S+L + + ++ G
Sbjct: 106 GRSPNEFTLSSVLKSCRNMKVLAYG 130
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 293/526 (55%), Gaps = 3/526 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I ARKLF+E+P R + T+NS+I ++ + E + LY+ M+ E V PD+ TF+ KA
Sbjct: 51 ITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKA 110
Query: 86 CVSLMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
+ + G++ AV LG+ +D FV + ++++Y K GKM +A F+++ KD+V
Sbjct: 111 FSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVL 170
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
++++I G G EA++ ++ M I +E + ++ +C +LGD G +HG +
Sbjct: 171 FTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVV 230
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ L V QTSL+ MY+K ++ + VF +++ + VTW + I G QNG L
Sbjct: 231 KSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALS 290
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYS 323
+ EM C P+ + S L AC+ + L+ G+ IH TV+ D N + ++I +Y
Sbjct: 291 MFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYG 350
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG AR++F+ + D++S N +I +Y +G G EAL LF +M + KP+ TF S
Sbjct: 351 KCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFIS 410
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L A +++GLVEEG F L+ + + I+ T HY CM+DLL RA EEA +++
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE-GKN 469
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P + W LL+ C H + + EK KK+L P D G H L++N +A KW+ V ++
Sbjct: 470 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMK 529
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
R +KK P S V+++ E+H F+ D SH + +I +L +L
Sbjct: 530 SAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHEL 575
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 177/332 (53%), Gaps = 3/332 (0%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F G +++ Y+KC + EA F++M + +V W+SMI+ V G+ +EA++ Y M E
Sbjct: 36 FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFE 95
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDL 230
G+ D + +A +++G SR G HG ++ + D V T +VDMYAK G +
Sbjct: 96 GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKD 155
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF + ++V + ALI G+ Q GL G LE+ +M +P+ +L S L++C
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGN 215
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLG-TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+G L GK IHG V+ ++V TS++ MYSKC + + +F+ + ++W
Sbjct: 216 LGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSF 275
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I +G E ALS+F +MI + P+H TF+S+L A S ++E G + V K
Sbjct: 276 IVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTV-KLG 334
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+ + A ++ L + G VE+A + +S++
Sbjct: 335 VDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 184/360 (51%), Gaps = 6/360 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + AR +F+ + + V + ++I+ Y+++ E L ++ M+ ++P+
Sbjct: 143 IVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPN 202
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L +C +L DL G+ I V+ G + V +S+L +Y KC + +++ F
Sbjct: 203 EYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFN 262
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V W+S I GLV NG+ A+ ++ M + I + ++ AC+ L
Sbjct: 263 SLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEA 322
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +++ ++ + V +L+ +Y K G+++ A VF++++ +++V+ +I +AQ
Sbjct: 323 GEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQ 382
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
NG LEL M+ G +P+ V+ +S LLAC G ++ G I +++ R + ++ L
Sbjct: 383 NGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQI--FSLIRNNHSIELT 440
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
T +ID+ + A L ++ ++ D+I W ++ + IHG E A +M++
Sbjct: 441 RDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLD 500
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 125/258 (48%), Gaps = 1/258 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L + S ++ +Y N + + K+F L T+ S I+ +
Sbjct: 229 VVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIA 288
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L ++ +MI+ + P+ TF+ L AC SL L+ GE+I V+LG + +V +++++L
Sbjct: 289 LSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHL 348
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + +A FE + D+V ++MI NG EA++ ++RMKK G + V
Sbjct: 349 YGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTF 408
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ AC + G G + H + L T ++D+ + + A+ + +
Sbjct: 409 ISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK 468
Query: 240 RINIVTWGALISGFAQNG 257
+++ W L++ +G
Sbjct: 469 NPDVIQWRTLLNACKIHG 486
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query: 298 KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
KS+H + ++ G +ID Y KC V + AR LFD+M +R +++WN +I+S+ G
Sbjct: 21 KSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRG 80
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+EA+ L+ M+ V PD TF+++ A S G+ EG+ L V + ++
Sbjct: 81 KTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVV-LGFEVSDGFV 139
Query: 418 AC-MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A +VD+ A+ G++++A + D + + + ++ AL+ G
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRV-LDKDVVLFTALIVG 177
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 288/528 (54%), Gaps = 1/528 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A +F + + + +++ YS + P ++++M +P+ T LKA
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
V L + +G+ I A++ + VG ++L++Y KCG + +A +AFE + D++
Sbjct: 273 AVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S MI+ + Q +A + + R+ + + +E + ++QAC ++ FG +H ++I+
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
D+ V +L+D YAK +D + +F ++ N V+W ++ GF+Q+GL L +
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EMQ+ V+ S L ACA ++ IH + F+ + V+G S+ID Y+K
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F + RD+ISWN II+ Y +HG +AL LF +M ++ V+ + TF +L
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LS S +GLV G FD M + I+P+ +HY C+V LL RAG + +AL+ + + + P
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 632
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW ALLS C HK ++G A+K+L++ P D + L+SN +A ++VA +RK
Sbjct: 633 SAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRK 692
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+MR G++KVPG S VE+ GE+HAF + H I +L+ L L+
Sbjct: 693 SMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLK 740
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 230/475 (48%), Gaps = 5/475 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + SAR+LF+ +P R + ++ +++ A++++ L+ ++ E +
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T LK +++ + + A +LG+ ++ FVGS +++ Y C +++A F
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ RKD V W++M++ N P A + +M+ G + + +++A L
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG +I+ + + V +L+DMYAK G + A F+ + +++ +IS +AQ
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
+ EL + + P+ SL S L AC + L GK IH + ++ + +L +
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++D Y+KC + +F ++ + +SWN I+ + G GEEALS+F +M +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
T++S+L A + + + + K ++D A+ G + +AL
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQ-IHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL 520
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
K+ + E + W A++SG H + + ++ ++ K N +D+ AL+S
Sbjct: 521 KVFQHL-MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLS 574
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 152/287 (52%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y DI AR FE +P V + +I Y++ + L+ ++++ V
Sbjct: 302 GALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVL 361
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ + + L+AC +++ L G++I A+++G+ +D+FVG+++++ Y KC M+ ++
Sbjct: 362 PNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKI 421
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F ++ + V W++++ G +G EA+ + M+ + +V +++ACA
Sbjct: 422 FSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASI 481
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R +H + N D + SL+D YAK G++ A VF+++ +I++W A+ISG+
Sbjct: 482 RHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGY 541
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
A +G A LEL M E + ++ V+ L C+ G + G S+
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSL 588
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 185/374 (49%), Gaps = 10/374 (2%)
Query: 74 PDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELG-YGN-DVFVGSSMLNLYVKCGKMNE 129
P +F A L+ C++ D + G + V G G D+F + +LN+Y K G +
Sbjct: 55 PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F++M +++V + +++ G A ++R++ EG + ++ V+ +++
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ + VH + + + + V + L+D Y+ + A HVF + R + V W A+
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF- 308
+S +++N + + +M+ G +P+ +L S L A + + LGK IHG ++
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D +G +++DMY+KCG AR F+ + D+I + +I+ Y E+A LFL+
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLAR 426
++ + V P+ + +S+L A ++ ++ G+ + + KI + ++D A+
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAI---KIGHESDLFVGNALMDFYAK 411
Query: 427 AGEVEEALKIVDSM 440
+++ +LKI S+
Sbjct: 412 CNDMDSSLKIFSSL 425
>gi|297741134|emb|CBI31865.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 279/517 (53%), Gaps = 50/517 (9%)
Query: 40 GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW 99
G YN++I AY+ +P +Y +++ PD TF V LKAC + ++ GE++
Sbjct: 69 GTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVH 128
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
AV++G+ D++V +S+L+ Y CGK A F++M +D+V W+ +I+G V G
Sbjct: 129 GVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFD 188
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
EA++ + +M + + + ++ AC +G G VHG +R + + V +LV
Sbjct: 189 EAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALV 245
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMY K L A +F + +IV+W ++ISG Q +LEL +MQ G EPD +
Sbjct: 246 DMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRI 305
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
L S L ACA +G L G+ + Y R+ ++++ +GT+++DMY+KCG A +F+ +
Sbjct: 306 ILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGI 365
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+R++ +WN ++ +HGHG EAL F MI ++P+ TF ++L+A HSGLV EGR
Sbjct: 366 PNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGR 425
Query: 399 YWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+F M+S+ + P +HY CM+DLL RAG ++EA
Sbjct: 426 SYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYN---------------------- 463
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
G++ L+SN +A ++W++V VR+ M+ G++K PG
Sbjct: 464 -----------------------GVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGS 500
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
SV+EV+GE H F++ D +H++ EDI +L L + R
Sbjct: 501 SVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQWR 537
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 155/271 (57%), Gaps = 3/271 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F+E+ +R V ++ +I Y R E + L+ +K DV P+ +TF L AC
Sbjct: 159 AGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGR 215
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L MG+ + + +G + VG++++++YVKC + EA F+++ +D+V W+S+
Sbjct: 216 MGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSI 275
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+GLV QP+++++ + M+ G++ D +++ ++ ACA LG +G V Y R+ +
Sbjct: 276 ISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGI 335
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
D+ + T+LVDMYAK G +++A H+F + NI TW AL+ G A +G L+
Sbjct: 336 EWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFEL 395
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
M G P+ V+ ++ L AC G + G+S
Sbjct: 396 MIGAGIRPNEVTFLAILTACCHSGLVAEGRS 426
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 18/234 (7%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ ARKLF+ELP R + ++ SII + + P + L L+ M V PD T L A
Sbjct: 254 LCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSA 313
Query: 86 CVSLMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
C SL L G E I R+ +E D+ +G++++++Y KCG + A+ F + ++
Sbjct: 314 CASLGALDYGRWVQEYIERQGIEW----DIHIGTALVDMYAKCGCIEMALHIFNGIPNRN 369
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+ W++++ GL +G EA+ ++ M GI +EV + ++ AC G G S
Sbjct: 370 IFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFY 429
Query: 202 YSIRRHLNLDVKVQ--TSLVDMYAKTGHLD--------LASHVFKNMSRINIVT 245
I + N +++ ++D+ + G LD L S+++ R + VT
Sbjct: 430 QMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYNGVYVLLSNIYATNERWDDVT 483
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 269/479 (56%), Gaps = 4/479 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ S + L++CV ++ G ++ + + G G D + + +++LY CG ++ A F
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 135 EKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGD 192
++M + ++ W+ +I +G A++ Y+ M G + D +++ACA L D
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH +R + DV V T L+DMYAK G +D A VF + + + W ++I+
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
QNG L L M + G P +LVSA+ A A L G+ +HGY RR F
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-I 370
L TS++DMY+K G A LF+Q+ R+LISWN +I +G+HGH + A LF +M
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
E V PDH TF +LSA +H G+V+E + FDLMV+ Y I+PT +HY C+VD+L +G
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++ M +P +W ALL+GC HK + E +K+++L P+D G + L+SN +
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A KWEE A VRK M G+KK+ S +E+ G+ H F++ D SH + +DI L++L
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERL 545
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 193/399 (48%), Gaps = 7/399 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDV 72
R++ LY + AR++F+E+P +G V +N +I AY+R + LY M+ +
Sbjct: 108 RLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSM 167
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ T+ LKAC +L+DL G E+ + + + DVFV + ++++Y KCG M+EA
Sbjct: 168 KPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWA 227
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +D W+SMI NG+P EA+ + M EGI ++ I A A
Sbjct: 228 VFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASA 287
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HGY RR K++TSL+DMYAK+G + +A +F+ + +++W A+I G
Sbjct: 288 LPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICG 347
Query: 253 FAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
F +G A EL M+S PD ++ V L AC G ++ K + V +
Sbjct: 348 FGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIK 407
Query: 312 LVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQ 368
+ T ++D+ G A + M + D W ++ IH + E A L LQ
Sbjct: 408 PTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA-ELALQ 466
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+ + D + L + + SG EE LM ++
Sbjct: 467 KLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNR 505
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 288/538 (53%), Gaps = 36/538 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+II ++S E P E ++N M++ V D +F++ LKAC L +K G +I
Sbjct: 90 WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 149
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ G+DVF+ + ++ LY++CG + A F++M ++D V ++SMI+G V +G + A +
Sbjct: 150 RMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARE 209
Query: 164 AYKRMK-------------------KEGIDA-----------DEVVMMGLIQACADLGDS 193
+ M +EG+ D + +I C G
Sbjct: 210 LFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKM 269
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ +R DV ++VD YAK G +D+A +F M ++++ A+++G+
Sbjct: 270 ENAHHLFNQMPKR----DVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGY 325
Query: 254 AQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
QNG L +M S PD+ +L+ L A AQ+G G ++H Y F +
Sbjct: 326 VQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLS 385
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
LG ++IDMY+KCG A ++F+ + + + WN II IHG GE A LF++M +
Sbjct: 386 EKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEK 445
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VKPD TF +L+A +H+GLV+EG F+LM +K++P +HY CMVD+L RAG VE
Sbjct: 446 LFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVE 505
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA K V+ M EP VW LLS C NH+ F+IGE VAK ++ ++ + + L+SN +A
Sbjct: 506 EAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYA 565
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W +V +R M++ +KK+PG S +E+ G +H F + DKSH Q +I +L L
Sbjct: 566 GFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSL 623
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 43/304 (14%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+ + R ++NS+I Y + L+ DV P ++ + +S
Sbjct: 176 ARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELF------DVMPMEQKNLISWNSMIS 229
Query: 89 LMDLKMGEEIWRKAVELGY---GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
EE R A EL D+ +SM++ VKCGKM A F +M ++D+V W
Sbjct: 230 --GYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSW 287
Query: 146 SSMIN-------------------------------GLVFNGQPREAVDAYKRM-KKEGI 173
++M++ G V NG EA++ + M ++ +
Sbjct: 288 ANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKEL 347
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D ++ + A A LG G+++H Y +L K+ +L+DMYAK G +D A
Sbjct: 348 FPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALS 407
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF+++ +I W A+I G A +GL EL MEM+ +PD ++ + L AC G
Sbjct: 408 VFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGL 467
Query: 294 LKLG 297
+K G
Sbjct: 468 VKEG 471
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 9/256 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M K ++ ++ N V L G+ DI AR LF+E+P R V + N+++ Y + E
Sbjct: 279 MPKRDVVSWANMVDGYAKL--GEIDI--ARGLFDEMPERDVISCNAMMAGYVQNGHLMEA 334
Query: 61 LGLYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L ++ M+ ++++ PD++T + L A L G + + G+ +G ++++
Sbjct: 335 LNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALID 394
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y KCG ++ A+ FE + K + W+++I GL +G A + + M+K + D++
Sbjct: 395 MYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDIT 454
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT--SLVDMYAKTGHLDLASHVFKN 237
+G++ AC G + GL +RR ++ K+Q +VD+ + GH++ A +
Sbjct: 455 FIGVLNACNHAGLVKEGLMCFEL-MRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEK 513
Query: 238 MS-RINIVTWGALISG 252
M N V W L+S
Sbjct: 514 MPIEPNDVVWRTLLSA 529
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
K+ + N W A+I F+ + M G D S L AC+++G +K
Sbjct: 80 KHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIK 139
Query: 296 LGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G IHG R ++ L ++ +Y +CG AR LFD+M RD +S+N +I Y
Sbjct: 140 EGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYV 199
Query: 355 IHG------------------------------HGEEALSLFLQMIETMVKPDHSTFASL 384
HG EE L + ++ E M K D ++ S+
Sbjct: 200 KHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSM 259
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+ G +E + F+ M + + +A MVD A+ GE++ A + D M
Sbjct: 260 IDGCVKCGKMENAHHLFNQMPKRDVVS-----WANMVDGYAKLGEIDIARGLFDEM 310
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 295/527 (55%), Gaps = 5/527 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K + + V + ++Y + AR LF ELP + + ++ S+I AY R + +
Sbjct: 242 VKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAV 301
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M + ++PD + L + ++ G+ V +G+ V +G++++++Y
Sbjct: 302 ELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK---KEGIDADEV 178
KC +++ A F + ++D WSSM+ G + ++ Y+ M+ K+ + D
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTN 421
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ +I +C+ LG R G S H YSI+ + V +L+ MY + G+ D+A +F +
Sbjct: 422 SLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMV 481
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++VTW ALIS ++ G + L L +M + G +P+S +LVS + +CA + L+ G+
Sbjct: 482 KTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH + + +L + T+++DMY KCG AR +FD M RD+++WNV+I+ YG+HG
Sbjct: 542 LIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHG 601
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+AL LF M VKP+ TF ++LSA H+GLV++GR F M +Y ++P KHY
Sbjct: 602 EAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHY 660
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
ACMVDLL ++G ++EA +V +M EP +W LL C H F +G +VAKK +P
Sbjct: 661 ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDP 720
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
++ G + L+SN + +KW E+ +R M+ G++K G+S +++ G
Sbjct: 721 ENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 256/490 (52%), Gaps = 28/490 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE----D 71
++ +Y + A +LF+E+P R V + ++I E L +M++
Sbjct: 151 LVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGG 210
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP+S T L+AC L +L +G + V+ G G+ V SS+ ++Y KC +A
Sbjct: 211 ARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDAR 270
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F ++ KDLV W+S+I G +AV+ + M++ G+ DEVV+ L+ +
Sbjct: 271 ILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDA 330
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G + H +RR+ V + +L+ MYAK +D+A+ VF+ + + + +W +++
Sbjct: 331 KVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVV 390
Query: 252 GFAQNGLAGSTLELLMEMQ---SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+ + GL LEL EMQ FE D+ SL+S + +C+++G L+LG+S H Y+++
Sbjct: 391 AYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHL 450
Query: 309 -DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N + ++I MY +CG AR +F ++++D+++W+ +I+SY GH ++AL L+
Sbjct: 451 AGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYD 510
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA---CMVDLL 424
QM+ VKP+ +T S++S+ ++ +E G +L+ S K E + +VD+
Sbjct: 511 QMLTEGVKPNSATLVSVISSCANLAALEHG----ELIHSHVKDVGLECDLSICTALVDMY 566
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH-------KKFSIGEKVAKKVLKLNP 477
+ G++ A K+ DSM E + W ++SG H K FS+ E+ + P
Sbjct: 567 MKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMHGEAIQALKLFSMMERG-----NVKP 620
Query: 478 DDLGIHALVS 487
+ L A++S
Sbjct: 621 NSLTFLAILS 630
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 220/520 (42%), Gaps = 54/520 (10%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ + LS + ++++ Y A F P +NS++ + R L
Sbjct: 33 VTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTL 92
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY---GNDVFVGSSML 118
+ +M RP T + A L L +G + +V G V V SS++
Sbjct: 93 SAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLV 152
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE----GID 174
+Y +CG + +A+ F++M +D+V W+++I+G V NGQ E + RM + G
Sbjct: 153 YMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGAR 212
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ M ++AC LG+ G +HG+ ++ + V +SL MY K + A +
Sbjct: 213 PNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARIL 272
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F + ++V+W +LI + + G A +EL + M+ G +PD V + L +
Sbjct: 273 FPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK+ H VRR F ++++G ++I MY+KC A +F + RD SW+ ++ +Y
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392
Query: 354 GIHGHGEEALSLFLQM--------------------------------------IETMVK 375
G + L L+ +M I+ +
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
+ S +L+S G + R F ++ +K + ++ ++ + G ++AL
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT-----WSALISSYSHLGHSKDALL 507
Query: 436 IVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+ D M TE P A V+++S C N GE + V
Sbjct: 508 LYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 53/297 (17%)
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +L+ + STL M++ G P + A A++G L +G ++H Y+V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 306 R----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
R D ++ + +S++ MY++CG A LFD+M RD+++W +I+ +G E
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 362 ALSLFLQMIETM----VKPDHSTF-----------------------------------A 382
LS ++M+ + +P+ T +
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
SL S + E+ R F + K + T ++ RAG E+A+++ M
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPEKDLVSWTS-----LIGAYCRAGHAEKAVELFLGMEE 309
Query: 443 ---EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGIHALVSNFFAMEQ 494
+P V LL+G N K G+ +++ N D L +AL+S + +Q
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQ 366
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 288/529 (54%), Gaps = 2/529 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y N + A +LF+E+P +YN++I YS+ + + L+ +M ++P
Sbjct: 190 LVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPT 249
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L A + L D+ +G++I ++ + +VFV +++L+ Y K + +A F+
Sbjct: 250 EFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 309
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D V ++ +I+G ++G+ + A D ++ ++ D + ++ ++ D
Sbjct: 310 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 369
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I + ++ V SLVDMYAK G + A +F N++ + V W A+IS + Q
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 429
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G L+L +M+ D + S L A A I L LGK +H + ++ F N+
Sbjct: 430 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 489
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++D+Y+KCG A F +M R+++SWN +I++Y +G E L F +M+ + +
Sbjct: 490 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 549
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD +F +LSA SHSGLVEEG + F+ M YK+ P +HYA +VD+L R+G EA
Sbjct: 550 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 609
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAME 493
K++ M +P +W ++L+ C HK + + A ++ + D + +SN +A
Sbjct: 610 KLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAA 669
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+WE V+ V K MR G+KK+P YS VE+ E H F D+ H Q E+I
Sbjct: 670 GQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEI 718
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 231/482 (47%), Gaps = 11/482 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I+ Y ++ ARKLF+ + R T+ +I YS+ E L+ QM +
Sbjct: 85 STNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCG 144
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWR---KAVELGYGNDVFVGSSMLNLYVKCGKMN 128
PD TF L C +MG +I + + ++LGY + + VG+++++ Y K +++
Sbjct: 145 TEPDYVTFVTLLSGCNGH---EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
A F++M D V +++MI G +G +AV+ + M+ G+ E ++ A
Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANI 261
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L D G +H + I+ + +V V +L+D Y+K + A +F M + V++
Sbjct: 262 GLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNV 321
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRR 307
+ISG+A +G +L E+Q F+ + L + ++G+ IH T V
Sbjct: 322 IISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT 381
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
D +++G S++DMY+KCG A +F + R + W +I++Y G EE L LF
Sbjct: 382 ADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFN 441
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M + V D +TFASLL A + + G+ ++ K + ++D+ A+
Sbjct: 442 KMRQASVIADQATFASLLRASASIASLSLGKQLHSFII-KSGFMSNVFSGSALLDVYAKC 500
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHAL 485
G +++A++ M + + W A++S + + K K+++ L PD + +
Sbjct: 501 GSIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 559
Query: 486 VS 487
+S
Sbjct: 560 LS 561
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N V +I Y K G AR LFD M R ++W ++I Y +EA LF+QM
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 371 ETMVKPDHSTFASLLS 386
+PD+ TF +LLS
Sbjct: 142 RCGTEPDYVTFVTLLS 157
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ + S ++ +Y I A + F+E+P R + ++N++I AY++
Sbjct: 478 IIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEAT 537
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR-----KAVELGYGNDVFVGS 115
L + +M+ ++PDS +F L AC ++ G +W + +L + + +
Sbjct: 538 LKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG--LWHFNSMTQIYKLDPRREHY--A 593
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQ---PREAVDAYKRMKKE 171
S++++ + G+ NEA +M D + WSS++N + R A D M +E
Sbjct: 594 SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNM-EE 652
Query: 172 GIDADEVVMMGLIQACA 188
DA V M I A A
Sbjct: 653 LRDAAPYVNMSNIYAAA 669
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 291/536 (54%), Gaps = 2/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A KLF+E+ + ++I AY+ + + +GL+++M++ +P
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPP 181
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
SS +T LK+ V+ L +G +I + G ++ + + ++N+YVKCG + A F+
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K V W+ ++ G G+ R+A+ + + EG++ D V +++ACA L + RF
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRF 301
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + L +V V T LVD Y K + A F+ + N V+W A+ISG+ Q
Sbjct: 302 GKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 361
Query: 256 NGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
++ ++S +S + S AC+ + +G +H ++R
Sbjct: 362 MSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 421
Query: 315 GTS-VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
G S +I MYSKCG A +F+ M + D+++W I+ + +G+ EAL LF +M+
Sbjct: 422 GESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 481
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP+ TF ++L+A SH+GLVE+G+++ D M+ KY + PT HY CM+D+ AR+G ++EA
Sbjct: 482 MKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 541
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L+ + +M EP W LSGC HK +G+ +++ +L+P+D + L N +
Sbjct: 542 LRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWA 601
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KWEE A V K M + +KK S ++ G++H FI+ DK H Q ++I LK+
Sbjct: 602 GKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEF 657
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 191/364 (52%), Gaps = 4/364 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+ L + + I+ +Y +V A+++F+++ ++ + +++ Y++ +
Sbjct: 208 VIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDA 267
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +I E V DS F+V LKAC SL +L+ G++I +LG +V VG+ +++
Sbjct: 268 LKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDF 327
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEVV 179
Y+KC A AF++++ + V WS++I+G Q EAV +K ++ K + +
Sbjct: 328 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFT 387
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ QAC+ L D G VH +I+R L +++L+ MY+K G LD A VF++M
Sbjct: 388 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMD 447
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+IV W A ISG A G A L L +M SCG +P+SV+ ++ L AC+ G ++ GK
Sbjct: 448 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 507
Query: 300 IHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+R+++ + +ID+Y++ G+ A M D +SW ++ H
Sbjct: 508 YLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTH 567
Query: 357 GHGE 360
+ E
Sbjct: 568 KNLE 571
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 190/418 (45%), Gaps = 20/418 (4%)
Query: 48 IIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY 107
+++ S+ E + +M K V ++ +AC L L G + + +G
Sbjct: 53 LVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGR-LLHNRMRMGI 111
Query: 108 GN-DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
N V + + +L +Y +CG + +A F++M + V ++MI+ G +AV +
Sbjct: 112 ENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFS 171
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
RM + G + L+++ + G +H + IR L + ++T +V+MY K G
Sbjct: 172 RMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCG 231
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
L A VF M+ V W L+ G+ Q G A L+L +++ + G E DS L
Sbjct: 232 WLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLK 291
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
ACA + L+ GK IH + + + +GT ++D Y KC A F +++ + +S
Sbjct: 292 ACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 351
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W+ II+ Y EEA+ F K S A +L++ +++ + + D +
Sbjct: 352 WSAIISGYCQMSQFEEAVKTF--------KSLRSKNAVVLNSFTYTSIFQACSVLADCNI 403
Query: 406 S--------KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K + ++ + ++ + ++ G +++A ++ +SM P + W A +SG
Sbjct: 404 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDN-PDIVAWTAFISG 460
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 285/509 (55%), Gaps = 9/509 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELP-LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+I++ DI + ++FE+L +R + N ++ ++S+ + P + + L+ +M++E + P
Sbjct: 214 LISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNP 273
Query: 75 DSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D F+V + +S++D L +G+++ ++ G D+ VGSS+ +Y KCG + E+
Sbjct: 274 DE--FSVC--SLLSVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSL 329
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ KD CW+SMI+G G REA+ + M EG DE + ++ C+ L
Sbjct: 330 FQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSL 389
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+HGY++R ++ + + ++LV+ Y+K G L LA V+ + ++ V+ +LISG+
Sbjct: 390 PRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGY 449
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
+Q+GL L +M GF DS ++ S L A +LG +H Y +
Sbjct: 450 SQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEP 509
Query: 313 VLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G+S++ MYSK G + C +A F Q+ DLI+W +IASY HG EAL ++ M E
Sbjct: 510 SVGSSLLTMYSKFGSIEDCCKA-FSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKE 568
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KPD TF +LSA SH GLVEEG + + MV Y I+P +HY CMVD L R+G +
Sbjct: 569 KGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 628
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA +++ +P VW LL+ C + +G+ AKK ++L P D G + +SN A
Sbjct: 629 EAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILA 688
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+W+EV RK M+ +G++K PG+S V
Sbjct: 689 EVGEWDEVEETRKLMKGTGVQKEPGWSSV 717
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 10/365 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A K+F + V +N+II R ++ V L+++M +PDS T++ L AC S
Sbjct: 26 AYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACAS 85
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +L+ G+ + + ++ G DVFV +S+++LY KCG M EA F ++ +V W+ M
Sbjct: 86 LEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVM 144
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++G + A++ ++ M+ G++ + + +I AC VH + +
Sbjct: 145 LSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGF 204
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMS---RINIVTWGALISGFAQNGLAGSTLEL 265
LD V +L+ M +K+G ++L+ VF+++ R NIV +++ F+QN G + L
Sbjct: 205 YLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSFSQNKKPGKAIRL 262
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
M G PD S+ S L + + L LGK +H YT++ +L +G+S+ MYSK
Sbjct: 263 FTRMLQEGLNPDEFSVCSLL---SVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSK 319
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG + +LF ++ +D W +I+ + +G+ EA+ LF +M++ PD ST A++
Sbjct: 320 CGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAV 379
Query: 385 LSALS 389
L+ S
Sbjct: 380 LTVCS 384
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 173/363 (47%), Gaps = 28/363 (7%)
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+GY V SS+++ + K + +A F ++ CW+++I G + N D
Sbjct: 1 MGYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDL 60
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+ M D ++ ACA L + RFG V I+ DV V TS+VD+YAK
Sbjct: 61 FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAK 119
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
GH+ A VF +S ++V+W ++SG+ ++ A S LE+ EM+ G E +S ++ S
Sbjct: 120 CGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSV 179
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF---DQMQS 340
+ AC + + +H + + F + + ++I M SK G + + +F D ++
Sbjct: 180 ISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRR 239
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS--------HSG 392
++++ NV++ S+ + +A+ LF +M++ + PD + SLLS L HS
Sbjct: 240 QNIV--NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSY 297
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
++ G DL V + + + ++ G +EE+ + + + A W ++
Sbjct: 298 TLKSGLI-LDLTVG-----------SSLFTMYSKCGSLEESYSLFQEIPFKDN-ACWASM 344
Query: 453 LSG 455
+SG
Sbjct: 345 ISG 347
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
VQ+SL+D ++K + A VF++ N+ W +I+G +N G+ +L EM + G
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCN-G 67
Query: 274 FE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCAR 332
F+ PDS + S L ACA + L+ GK + ++ ++ + TS++D+Y+KCG + AR
Sbjct: 68 FQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDVFVCTSIVDLYAKCGHMAEAR 127
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+F ++ + ++SW V+++ Y AL +F +M + V+ + T S++SA
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPS 187
Query: 393 LVEEGRY---WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
+V E W V K A ++ + +++G++ + ++ + + +
Sbjct: 188 MVCEASQVHAW----VFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV 243
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
+++ +KK ++ ++L+ LNPD+ + +L+S
Sbjct: 244 NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLS 283
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 244/411 (59%), Gaps = 2/411 (0%)
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D + S+ G P A+ Y+R+ + + +ACADL R G+ VH
Sbjct: 72 DSFLFCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGVH 131
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+++ D VQT+LV +Y+K G LD+A +F + ++V W A+ISG+ QNGLAG
Sbjct: 132 AHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAG 191
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVI 319
+E+ EM+ G PDS + V+ L ACAQ G L LG + V R + N+VLG +++
Sbjct: 192 RAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALV 251
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
+MY++CG+ + AR FD +Q R++++W +IA YG+HGHG EA+ LF M + P+
Sbjct: 252 NMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDV 311
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV-D 438
TF ++LSA +H+GLV +GR F M S Y + P +HY MVD+ RAG +++A++ + D
Sbjct: 312 TFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIHD 371
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
S+ EPG VW A+L C HK FS+G +VA++++ L P++ L+SN +A+ K
Sbjct: 372 SIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNH 431
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
V VR TM K +KK GYS++E+ G H F M +KSH + +I L+KL
Sbjct: 432 VEKVRNTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKL 482
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 178/366 (48%), Gaps = 35/366 (9%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+ S+ A +R+ P L Y +++ + S FT KAC L L+ G + AV
Sbjct: 76 FCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGVHAHAV 135
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
LG+G+D FV ++++ LY KCGK++ A F+ ++ + +V W++MI+G NG A++
Sbjct: 136 LLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIE 195
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y+ M+ G D + + ACA G G V + + ++V + +LV+MYA
Sbjct: 196 VYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYA 255
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
+ G ++ A F + N+VTW ++I+G+ +G G ++L M+ G P+ V+ V+
Sbjct: 256 RCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVA 315
Query: 284 ALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
L ACA G + G KS++G R + S++DMY + G+ L D
Sbjct: 316 VLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHY-----CSMVDMYGRAGL------LDD 364
Query: 337 QMQS-RDLIS-------WNVIIASYGIHGHGEEALSLFLQMIETMV-----KPDHSTFAS 383
MQ D I W ++ + +H + SL +++ E ++ P H S
Sbjct: 365 AMQFIHDSIPGEPGPEVWTAMLGACKMH----KNFSLGVEVAERLIALEPENPSHRVLLS 420
Query: 384 LLSALS 389
+ ALS
Sbjct: 421 NIYALS 426
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARKLF+ + R V +N++I Y + + +Y +M PD
Sbjct: 149 LVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIEVYREMRVAGEAPD 208
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+TF L AC L +G E+ R V +V +G++++N+Y +CG +N+A F+
Sbjct: 209 SATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYARCGLVNKAREWFD 268
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG---D 192
+Q +++V W+SMI G +G EAV + M+++G ++V + ++ ACA G D
Sbjct: 269 MLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACAHAGLVSD 328
Query: 193 SRFGL----SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
R SV+G R + S+VDMY + G LD
Sbjct: 329 GRDAFASMKSVYGLVPR------AEHYCSMVDMYGRAGLLD 363
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 293/545 (53%), Gaps = 40/545 (7%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N +I +Y E L Y +M+ + VRPD+ T+ LKAC +DL G E+ +++
Sbjct: 110 WNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREV-HESI 168
Query: 104 ELGYGN--DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
YG+ +++V +S++++Y K G+++ A F +M +D V W+ +I+ G +EA
Sbjct: 169 NAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEA 228
Query: 162 VDAYKRMKKEG-----------------------------------IDADEVVMMGLIQA 186
+ ++ M+ G ID D V M+ + A
Sbjct: 229 FELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGA 288
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C+ +G + G +H +IR + V+ +L+ MY++ L A +FK++ ++ TW
Sbjct: 289 CSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTW 348
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+++SG+ + L EM G EP+ V++ S L CA++ L+ GK H Y +R
Sbjct: 349 NSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMR 408
Query: 307 R--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R F+ L+L S+++MY++ G A+ +FD ++ RD +++ +IA YGI G G+ AL
Sbjct: 409 REGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALK 468
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF +MI+ +KPD T ++LSA SHSGLV EG F+ M + Y I P +H++CMVDL
Sbjct: 469 LFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLF 528
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG + +A K++ SM P A+W L+ C H IGE A+K+L++ P++ G +
Sbjct: 529 GRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYV 588
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L++N A +W ++A VR MR G++K PG + V+V F++ D S + D+
Sbjct: 589 LIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTSKHNSNDLYE 648
Query: 545 VLKKL 549
+L+ L
Sbjct: 649 LLEGL 653
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 211/448 (47%), Gaps = 48/448 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L +C +L L G+++ + LG+ N + + ++ Y + +A +
Sbjct: 48 LYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNP 107
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH-- 200
+ W+ +I+ V NG EA+ AY+ M +G+ D +++AC + D FG VH
Sbjct: 108 LPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHES 167
Query: 201 ---GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
Y R +L V SLV MY K G LD A +F M + V+W +IS +A G
Sbjct: 168 INAAYGHRWNL----YVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRG 223
Query: 258 -------------LAGS----------------------TLELLMEMQSCGFEPDSVSLV 282
LAG+ LELL +M+ C + D V+++
Sbjct: 224 LWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMI 283
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
L AC+ IG +KLG IH +R FD + ++I MYS+C A LF ++++
Sbjct: 284 IGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTK 343
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
L +WN +++ Y EEA LF +M+ + ++P++ T AS+L + +++G+ +
Sbjct: 344 SLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFH 403
Query: 402 DLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ + + + +V++ AR+G+V A ++ DS+ + + +L++G +
Sbjct: 404 CYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKV-TYTSLIAGYGIQGE 462
Query: 462 FSIGEKVAKKVLK--LNPDDLGIHALVS 487
K+ +++K + PD + + A++S
Sbjct: 463 GKTALKLFDEMIKHRIKPDQVTMVAVLS 490
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 206/444 (46%), Gaps = 62/444 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRK---ESPFEV------------ 60
++++YG ++ +AR+LF ++P R ++N II Y+ + + FE+
Sbjct: 184 LVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVN 243
Query: 61 --------------------LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
L L +QM + D+ D + L AC + +K+G I
Sbjct: 244 IITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHA 303
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
A+ + V ++++ +Y +C + A + F+ ++ K L W+SM++G + E
Sbjct: 304 SAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEE 363
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD-VKVQTSLV 219
A ++ M GI+ + V + ++ CA + + + G H Y +RR D + + SLV
Sbjct: 364 ASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLV 423
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
+MYA++G + A VF ++ R + VT+ +LI+G+ G + L+L EM +PD V
Sbjct: 424 EMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQV 483
Query: 280 SLVSALLACAQIGFLKLGK-------SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCAR 332
++V+ L AC+ G + G +++G F + ++D++ + G+ + A+
Sbjct: 484 TMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHF-----SCMVDLFGRAGLLNKAK 538
Query: 333 ALFDQMQSRDLIS-WNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ M R + W ++ + IHG+ GE A L+M KP++ + L++ +
Sbjct: 539 KVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEM-----KPENPGYYVLIANM 593
Query: 389 SH-----SGLVEEGRYWFDLMVSK 407
S L E Y DL V K
Sbjct: 594 HAAAGRWSKLAEVRTYMRDLGVRK 617
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ +C +L G +H ++I + + LV Y+ L A + N +N
Sbjct: 47 LLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVN 106
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH- 301
+ W LIS + NGL G L EM G PD+ + S L AC + L G+ +H
Sbjct: 107 PLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHE 166
Query: 302 ----GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
Y R +NL + S++ MY K G AR LF+QM RD +SWN II++Y G
Sbjct: 167 SINAAYGHR---WNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRG 223
Query: 358 HGEEALSLFLQM 369
+EA LF +M
Sbjct: 224 LWKEAFELFEEM 235
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 133/283 (46%), Gaps = 22/283 (7%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I++ + N +I +Y D+ A LF+ + + + T+NS++ Y+ + E
Sbjct: 306 IRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEAS 365
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSM 117
L+ +M+ + P+ T L C + +L+ G+E I R+ G+ + + + +S+
Sbjct: 366 FLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRRE---GFEDYLLLWNSL 422
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ +Y + GK+ A F+ ++R+D V ++S+I G G+ + A+ + M K I D+
Sbjct: 423 VEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQ 482
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL------DVKVQTSLVDMYAKTGHLDLA 231
V M+ ++ AC S GL G + ++ V+ + +VD++ + G L+ A
Sbjct: 483 VTMVAVLSAC-----SHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKA 537
Query: 232 SHVFKNMS-RINIVTWGALISGFAQNG---LAGSTLELLMEMQ 270
V +M R W L+ +G + E L+EM+
Sbjct: 538 KKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMK 580
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 295/527 (55%), Gaps = 5/527 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K + + V + ++Y + AR LF ELP + + ++ S+I AY R + +
Sbjct: 242 VKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAV 301
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M + ++PD + L + ++ G+ V +G+ V +G++++++Y
Sbjct: 302 ELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK---KEGIDADEV 178
KC +++ A F + ++D WSSM+ G + ++ Y+ M+ K+ + D
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTN 421
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ +I +C+ LG R G S H YSI+ + V +L+ MY + G+ D+A +F +
Sbjct: 422 SLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMV 481
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++VTW ALIS ++ G + L L +M + G +P+S +LVS + +CA + L+ G+
Sbjct: 482 KTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH + + +L + T+++DMY KCG AR +FD M RD+++WNV+I+ YG+HG
Sbjct: 542 LIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHG 601
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+AL LF M VKP+ TF ++LSA H+GLV++GR F M +Y ++P KHY
Sbjct: 602 EAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHY 660
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
ACMVDLL ++G ++EA +V +M EP +W LL C H F +G +VAKK +P
Sbjct: 661 ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDP 720
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
++ G + L+SN + +KW E+ +R M+ G++K G+S +++ G
Sbjct: 721 ENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 256/490 (52%), Gaps = 28/490 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE----D 71
++ +Y + A +LF+E+P R V + ++I E L +M++
Sbjct: 151 LVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGG 210
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP+S T L+AC L +L +G + V+ G G+ V SS+ ++Y KC +A
Sbjct: 211 ARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDAR 270
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F ++ KDLV W+S+I G +AV+ + M++ G+ DEVV+ L+ +
Sbjct: 271 ILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDA 330
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G + H +RR+ V + +L+ MYAK +D+A+ VF+ + + + +W +++
Sbjct: 331 KVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVV 390
Query: 252 GFAQNGLAGSTLELLMEMQ---SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+ + GL LEL EMQ FE D+ SL+S + +C+++G L+LG+S H Y+++
Sbjct: 391 AYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHL 450
Query: 309 -DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N + ++I MY +CG AR +F ++++D+++W+ +I+SY GH ++AL L+
Sbjct: 451 AGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYD 510
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA---CMVDLL 424
QM+ VKP+ +T S++S+ ++ +E G +L+ S K E + +VD+
Sbjct: 511 QMLTEGVKPNSATLVSVISSCANLAALEHG----ELIHSHVKDVGLECDLSICTALVDMY 566
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH-------KKFSIGEKVAKKVLKLNP 477
+ G++ A K+ DSM E + W ++SG H K FS+ E+ K P
Sbjct: 567 MKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVK-----P 620
Query: 478 DDLGIHALVS 487
+ L A++S
Sbjct: 621 NSLTFLAILS 630
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 220/520 (42%), Gaps = 54/520 (10%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ + LS + ++++ Y A F P +NS++ + R L
Sbjct: 33 VTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTL 92
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY---GNDVFVGSSML 118
+ +M RP T + A L L +G + +V G V V SS++
Sbjct: 93 SAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLV 152
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--- 175
+Y +CG + +A+ F++M +D+V W+++I+G V NGQ E + RM + D
Sbjct: 153 YMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGAR 212
Query: 176 -DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ M ++AC LG+ G +HG+ ++ + V +SL MY K + A +
Sbjct: 213 PNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARIL 272
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F + ++V+W +LI + + G A +EL + M+ G +PD V + L +
Sbjct: 273 FPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK+ H VRR F ++++G ++I MY+KC A +F + RD SW+ ++ +Y
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392
Query: 354 GIHGHGEEALSLFLQM--------------------------------------IETMVK 375
G + L L+ +M I+ +
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
+ S +L+S G + R F ++ +K + ++ ++ + G ++AL
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT-----WSALISSYSHLGHSKDALL 507
Query: 436 IVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+ D M TE P A V+++S C N GE + V
Sbjct: 508 LYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +L+ + STL M++ G P + A A++G L +G ++H Y+V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 306 R----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
R D ++ + +S++ MY++CG A LFD+M RD+++W +I+ +G E
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 362 ALSLFLQMIETM----VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
LS ++M+ + +P+ T S L A G + G V K +
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGV-KAGVGHCPSVV 253
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CH-NHKKFSIGEKVAKKVLKL 475
+ + + + E+A +I+ E L W +L+ C H + ++ + + L
Sbjct: 254 SSLFSMYTKCDSTEDA-RILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGL 312
Query: 476 NPDDLGIHALVSNF 489
PD++ I L++
Sbjct: 313 QPDEVVISCLLAGL 326
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 281/539 (52%), Gaps = 34/539 (6%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VRPDSSTFTVALKACVSL 89
LF + R + +YN++I +S S + + +Y +++ D VRP T + + A +L
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK-------------------------- 123
D +G++ + + LG+G + FVGS ++++Y K
Sbjct: 154 GDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213
Query: 124 -----CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
C + EA FE M +D + W++M+ G NG EA++ ++RM+ +GI D+
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ AC L G +H Y IR + +V V ++LVDMY+K + LA VF+ M
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ NI++W ALI G+ QNG + + + EMQ G +PD +L S + +CA + L+ G
Sbjct: 334 TCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGA 393
Query: 299 SIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
H V + + +++ +Y KCG A LFD+M D +SW +++ Y G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+E + LF +M+ VKPD TF +LSA S +G VE+GR +F M + I P + HY
Sbjct: 454 RAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CM+DL +R+G+++EA + + M P W LLS C IG+ A+ +L+++P
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDP 573
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ + L+ + A + +W EVA +R+ MR +KK PG S ++ ++H F +D+SH
Sbjct: 574 QNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 632
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 181/337 (53%), Gaps = 7/337 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LFE + R T+ +++ +++ E L ++ +M + + D TF L AC +
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L L+ G++I + Y ++VFVGS+++++Y KC + A F +M K+++ W+++
Sbjct: 285 LSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTAL 344
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G NG EAV + M+++GID D+ + +I +CA+L G H ++ L
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGL 404
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ V +LV +Y K G ++ A +F MS + V+W AL+SG+AQ G A T++L +
Sbjct: 405 MHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEK 464
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL----GTSVIDMYSK 324
M + G +PD V+ + L AC++ GF++ G+S + + D +V T +ID+YS+
Sbjct: 465 MLAKGVKPDGVTFIGVLSACSRAGFVEKGRSY--FHSMQKDHGIVPIDDHYTCMIDLYSR 522
Query: 325 CGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGE 360
G A QM D I W ++++ + G E
Sbjct: 523 SGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 36/380 (9%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
++F +++L+ +++ F M ++D+V ++++I G G +AV Y +
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 170 K--EGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK--- 224
+ + + M ++ A + LGD G H +R + V + LVDMYAK
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 225 -----------------------TGHL-----DLASHVFKNMSRINIVTWGALISGFAQN 256
TG L + A +F+ M+ + +TW +++GF QN
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLG 315
GL LE+ M+ G D + S L AC + L+ GK IH Y +R R+D N+ +G
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG 310
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
++++DMYSKC A +F +M +++ISW +I YG +G EEA+ +F +M +
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD T S++S+ ++ +EEG + L + + A +V L + G +E+A +
Sbjct: 371 PDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNA-LVTLYGKCGSIEDAHR 429
Query: 436 IVDSMSTEPGLAVWVALLSG 455
+ D MS ++ W AL+SG
Sbjct: 430 LFDEMSFHDQVS-WTALVSG 448
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 123/249 (49%), Gaps = 12/249 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A +F + + + ++ ++I+ Y + E + ++++M ++ + PD
Sbjct: 313 LVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +C +L L+ G + A+ G + + V ++++ LY KCG + +A F+
Sbjct: 373 DYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFD 432
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M D V W+++++G G+ +E +D +++M +G+ D V +G++ AC SR
Sbjct: 433 EMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSAC-----SRA 487
Query: 196 GLSVHGYSIRRHLNLDVKV------QTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
G G S + D + T ++D+Y+++G L A K M + + WG
Sbjct: 488 GFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGT 547
Query: 249 LISGFAQNG 257
L+S G
Sbjct: 548 LLSACRLRG 556
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 294/513 (57%), Gaps = 31/513 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG + + +FEE+ + V ++ S+I Y + E L L+N+M D +
Sbjct: 1258 LIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRM--RDALVE 1315
Query: 76 SSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
S+ FT+ + A L L G+ + A++ F+ ++ L++YVKCG+ +A +
Sbjct: 1316 SNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMI 1375
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
++++ DLV W+ MI G QP + + R+ + I +D + L+Q
Sbjct: 1376 YDELPTIDLVSWTVMIVGYTQARQPNDGL----RLFADEIRSDLLPNSALLQVF------ 1425
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ R LN +L+DMYAK + A +F + +++TW ++ISG+
Sbjct: 1426 --------FQRVRFLN-------ALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGY 1470
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFN 311
AQNG A L L +M+S PD+++LVS L A A +G +++G S+H Y+V+ F N
Sbjct: 1471 AQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSN 1530
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +GT++++ Y+KCG AR +FD M +++I+W+ +I YG+ G G +LS+F M++
Sbjct: 1531 LYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLK 1590
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+KP+ F ++LSA S+SG+VEEG +F M+ Y P+ KHYACMVDLLAR+G+++
Sbjct: 1591 EDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLARSGKLD 1650
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EAL + M + ++++ A L GC + +F +GE V +++L+L+ ++ + LVSN +A
Sbjct: 1651 EALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYA 1710
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
+ KW +V VR M + G+ KVPGYS+VE N
Sbjct: 1711 SDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNA 1743
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 213/441 (48%), Gaps = 26/441 (5%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ +YG D+ SAR +F+++P + +I Y + +V+ YN+M
Sbjct: 1157 KLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFREC 1216
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ F++ LKAC L ++ G ++ + V++G G D FV + ++++Y KCG++ + F
Sbjct: 1217 DNIIFSIILKACSELREIVEGRKVHCQIVKVG-GPDSFVMTGLIDMYGKCGQVECSSAVF 1275
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E++ K++V W+SMI G V N E + + RM+ ++++ + +I A L
Sbjct: 1276 EEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALH 1335
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VHGY+I+ L + T+ +DMY K G A ++ + I++V+W +I G+
Sbjct: 1336 QGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYT 1395
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
Q L L + P+ SALL Q+ F ++ RF
Sbjct: 1396 QARQPNDGLRLFADEIRSDLLPN-----SALL---QVFFQRV----------RF------ 1431
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++IDMY+KC S A A+F + +D+I+WN +I+ Y +G +AL LF QM +
Sbjct: 1432 LNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSL 1491
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T S LSA + G ++ G V +++ A+ G+ A
Sbjct: 1492 APDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSAR 1551
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
+ DSM + + W A++ G
Sbjct: 1552 MVFDSMGVK-NIITWSAMIGG 1571
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 192/431 (44%), Gaps = 25/431 (5%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G ++ + ++ +Y G + A + F++M D W MI N + + Y
Sbjct: 1147 GLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFY 1206
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
RM+ + D ++ +++AC++L + G VH I + D V T L+DMY K
Sbjct: 1207 NRMRMSFRECDNIIFSIILKACSELREIVEGRKVHC-QIVKVGGPDSFVMTGLIDMYGKC 1265
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G ++ +S VF+ + N+V+W ++I+G+ QN A L L M+ E + +L S +
Sbjct: 1266 GQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSII 1325
Query: 286 LACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
A ++ L GK +HGY ++ + + L T+ +DMY KCG AR ++D++ + DL+
Sbjct: 1326 NAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLV 1385
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA----------SLLSALSHSGLV 394
SW V+I Y + L LF I + + P+ + +L+ + +
Sbjct: 1386 SWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALLQVFFQRVRFLNALIDMYAKCHTI 1445
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVA 451
+ F ++ K I + M+ A+ G +AL++ + M S P V+
Sbjct: 1446 SDAYAIFHGVLEKDVIT-----WNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVS 1500
Query: 452 LLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
LS +G + +K L +L I + NF+A K + R
Sbjct: 1501 TLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYA---KCGDARSARMVFDSM 1557
Query: 510 GMKKVPGYSVV 520
G+K + +S +
Sbjct: 1558 GVKNIITWSAM 1568
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 4/294 (1%)
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
+ HG I L ++ T LV +Y G + A VF M + W +I + N
Sbjct: 1137 IKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLN 1196
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGT 316
L + M+ E D++ L AC+++ + G+ +H V+ + + T
Sbjct: 1197 DLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSFVMT 1256
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+IDMY KCG C+ A+F+++ ++++SW +IA Y + EE L LF +M + +V+
Sbjct: 1257 GLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVES 1316
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ T S+++A + + +G+ W K + + +D+ + G+ +A I
Sbjct: 1317 NPFTLGSIINAFTKLRALHQGK-WVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMI 1375
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
D + T L W ++ G ++ + G ++ ++ D L AL+ FF
Sbjct: 1376 YDELPT-IDLVSWTVMIVGYTQARQPNDGLRLFAD--EIRSDLLPNSALLQVFF 1426
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 287/516 (55%), Gaps = 12/516 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
++ Y ++ A K+F+E+P R + +N++I +S +V+GL+ M + D + P
Sbjct: 144 LVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSP 203
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ ST A L+ G+ + +G+ ND+ V + +L++Y K + A F
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV----VMMGLI-QACAD 189
+ +K+ V WS+MI G V N +EA + + +M ++AD V +GLI CA
Sbjct: 264 DSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQML---VNADMAMVTPVAIGLILMGCAR 320
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
GD G VH Y+I+ LD+ V +++ YAK G L A F + +IV++ +L
Sbjct: 321 FGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSL 380
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRF 308
ISG +N A + L +M+S G PD +L+ L AC+ + L G S HGY V +
Sbjct: 381 ISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGY 440
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N + +++DMY+KCG A+ +FD M RD++SWN ++ +GIHG G+EALSLF
Sbjct: 441 AVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNS 500
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARA 427
M +T V PD T ++LSA SHSGLV+EG+ F+ M + + P HY CM DLLARA
Sbjct: 501 MQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARA 560
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA V+ M EP + V LLS C +K +G +V+KK+ L + L+S
Sbjct: 561 GYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSLGETTESL-VLLS 619
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
N ++ ++WE+ A +R T +KSG+ K PGYS V+V+
Sbjct: 620 NTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDVD 655
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 252/480 (52%), Gaps = 16/480 (3%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
LY N++ AR +F+E+P ++ ++ +I AY + L LY +M+ VRP
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTK 103
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
T+ LKAC L ++ G+ I + D++V +++++ Y KCG+++ A+ F++
Sbjct: 104 FTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDE 163
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRF 195
M ++D+V W++MI+G + + + + M++ + + + ++G+ A G R
Sbjct: 164 MPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALRE 223
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +VHGY R + D+ V+T ++D+YAK+ + A VF + + N VTW A+I G+ +
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVE 283
Query: 256 NGL---AGST-LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
N + AG L++L+ P ++ L+ L+ CA+ G L G+ +H Y ++ F
Sbjct: 284 NEMIKEAGEVFLQMLVNADMAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAIKAGFIL 341
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L +G +VI Y+K G A F ++ +D++S+N +I+ + EE+ LF QM
Sbjct: 342 DLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMK 401
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYACMVDLLARAGE 429
+ ++PD +T +L+A S+ + G +V+ Y + + + ++D+ + G+
Sbjct: 402 SSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICN--ALMDMYTKCGK 459
Query: 430 VEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
+ A ++ D+M + W +L G H K ++ + + ++PD++ + A++S
Sbjct: 460 LYVAKRVFDTMHKRD-IVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILS 518
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 15/310 (4%)
Query: 79 FTVALKACVSLMDLKMGE----EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
F L++C+ +L +G+ + ++++ L + V V ++ LY C ++ A F
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLS-SSTVLV--NLTRLYASCNEVELARHVF 58
Query: 135 EKMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+++ R + + W MI V NG +A+D Y +M G+ + +++ACA L
Sbjct: 59 DEIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRA 118
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + + D+ V T+LVD YAK G LD+A VF M + +IV W A+ISG
Sbjct: 119 IEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISG 178
Query: 253 FAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
F+ + + L ++M +S P+ ++V A + G L+ GK++HGY R F
Sbjct: 179 FSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+LV+ T ++D+Y+K AR +FD ++ ++W+ +I Y + +EA +FLQM+
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQML 298
Query: 371 ----ETMVKP 376
MV P
Sbjct: 299 VNADMAMVTP 308
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 299/535 (55%), Gaps = 5/535 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L+ N ++ +YG D+ ++ ++F+ + + ++NS I + +VL
Sbjct: 247 VKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVL 306
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M + +V P S T + L A V L +G E+ +++ D+FV +S++++Y
Sbjct: 307 RMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMY 366
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G + +A FE+M+ +++V W++MI LV NG EA M+K G + + ++
Sbjct: 367 AKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLV 426
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA + + G +H +SIRR L D+ + +L+DMY+K G L LA ++F+ S
Sbjct: 427 NVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEK 485
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V++ LI G++Q+ +L L +M+S G + D+VS + AL AC + K GK IH
Sbjct: 486 DDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIH 545
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
VRR + L S++D+Y+K G+ A +F+++ +D+ SWN +I YG+HG +
Sbjct: 546 CVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQID 605
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
A LF M + DH ++ ++L+A SH GLV++G+ +F MV++ I+P + HYACM
Sbjct: 606 IAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACM 664
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL RAG++ + +I+ M VW ALL C H + + A+ + +L P+
Sbjct: 665 VDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHS 724
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN--GELHAFIMED 533
G + L+ N +A +W E +RK M+ ++K P YS V+ +L AF++ D
Sbjct: 725 GYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 779
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 245/459 (53%), Gaps = 20/459 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN-------QMI 68
++A Y AR++F+E+P R V ++NS++ S F V G+++ M+
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLV-------SAFLVNGMFHDARRALVSMM 212
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
+ + ++ + AC + + K G I AV++G V + ++++++Y K G +
Sbjct: 213 RSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVE 272
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
+M F+ M ++ V W+S I + G + + +++M + + + + L+ A
Sbjct: 273 ASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALV 332
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
+LG G VHGYSI+R ++LD+ V SLVDMYAK G L+ AS +F+ M N+V+W A
Sbjct: 333 ELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNA 392
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+I+ QNG L+ +MQ G P+S++LV+ L ACA++ LK+GK IH +++RR
Sbjct: 393 MIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRG 452
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F+L + ++IDMYSKCG S AR +F++ + +D +S+N +I Y E+L LF
Sbjct: 453 LMFDLFISNALIDMYSKCGQLSLARNIFERSE-KDDVSYNTLILGYSQSPWCFESLLLFK 511
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLAR 426
QM + D +F LSA ++ + + G+ ++V + P + ++DL +
Sbjct: 512 QMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTK 569
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
G + A KI + + T+ +A W ++ G H + I
Sbjct: 570 GGMLVTASKIFNKI-TKKDVASWNTMILGYGMHGQIDIA 607
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 224/440 (50%), Gaps = 26/440 (5%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
G ++ Y +D+ SAR + PLR +NS+ A S P E L +YN M++
Sbjct: 53 GALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLMLRSA 112
Query: 72 VRPDSSTFTVALKACVSLMDL--KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
VRPD TF AL A + + G E+ A+ G+ DVF G++++ Y CGK +
Sbjct: 113 VRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACGKACD 172
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F++M +D+V W+S+++ + NG +A A M + G + ++ ++ AC
Sbjct: 173 ARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGT 232
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ +FGLS+H +++ LN V + +LVDMY K G ++ + VF M N V+W +
Sbjct: 233 EQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSA 292
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I F G G L + +M P S++L S L A ++G LG+ +HGY+++R
Sbjct: 293 IGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAM 352
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D ++ + S++DMY+K G A +F+QM+ R+++SWN +IA+ +G EA L
Sbjct: 353 DLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTD 412
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRY---W-------FDLMVSKYKIQPTEKHYA 418
M ++ P+ T ++L A + ++ G+ W FDL +S
Sbjct: 413 MQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN----------- 461
Query: 419 CMVDLLARAGEVEEALKIVD 438
++D+ ++ G++ A I +
Sbjct: 462 ALIDMYSKCGQLSLARNIFE 481
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 295/539 (54%), Gaps = 28/539 (5%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S ++ +Y D+ A +FE++ + ++N++I E + L L QM ++
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ- 353
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
L + + MD++ +D+FV ++++Y KC + +A
Sbjct: 354 -----------LHSSLMKMDME---------------SDLFVSVGLVDMYSKCDLLEDAR 387
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+AF + KDL+ W+++I+G + EA+ + M KEGI ++ + ++++ A L
Sbjct: 388 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 447
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
VHG S++ + D+ V SL+D Y K H++ A +F+ + ++V++ ++I+
Sbjct: 448 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 507
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+AQ G L+L +EMQ +PD S L ACA + + GK +H + ++ F
Sbjct: 508 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 567
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ G S+++MY+KCG A F ++ R ++SW+ +I HGHG +AL LF QM+
Sbjct: 568 DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 627
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V P+H T S+L A +H+GLV E + +F+ M + +P ++HYACM+DLL RAG++
Sbjct: 628 KEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 687
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA+++V+ M E +VW ALL HK +G + A+ + L P+ G H L++N +
Sbjct: 688 NEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIY 747
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A KWE VA VR+ MR S +KK PG S +EV +++ F++ D+SH + ++I L +L
Sbjct: 748 ASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDEL 806
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 241/508 (47%), Gaps = 61/508 (12%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+ K+ LS + +I LY ARKL +E + +++++I Y++
Sbjct: 82 ITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L +++M V+ + TF+ LKAC + DL++G+++ V G+ DVFV ++++ +
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVM 201
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + ++ F+++ +++V W+++ + V EAV + M GI +E +
Sbjct: 202 YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSL 261
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ AC L DS G +HGY I+ + D +LVDMYAK G L A VF+ + +
Sbjct: 262 SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ 321
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV+W A+I+G + LELL +M+ + +
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMK---------------------------RQL 354
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ + +L + ++DMYSKC + AR F+ + +DLI+WN II+ Y +
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 414
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR---------------YWFDLM 404
EALSLF++M + + + +T +++L + + +V R Y + +
Sbjct: 415 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 474
Query: 405 VSKY----KIQPTEK-----------HYACMVDLLARAGEVEEALKI---VDSMSTEPGL 446
+ Y ++ E+ + M+ A+ G+ EEALK+ + M +P
Sbjct: 475 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLK 474
V +LL+ C N F G+++ +LK
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLHVHILK 562
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 188/381 (49%), Gaps = 12/381 (3%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG 95
LP + + +S E P + + N + K + P S +++ L C + L+ G
Sbjct: 19 LPFKPAPKLIQTVPQFS--EDP-QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPG 75
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+I + G +D + + ++NLY KC A ++ DLV WS++I+G N
Sbjct: 76 LQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQN 135
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G A+ A+ M G+ +E +++AC+ + D R G VHG + DV V
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+LV MYAK + +F + N+V+W AL S + Q G + L EM G +
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
P+ SL S + AC + GK IHGY ++ +D++ +++DMY+K G + A ++
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE----TMVKPDHST--FAS--LLS 386
F++++ D++SWN +IA +H H E+AL L QM +++K D + F S L+
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVD 375
Query: 387 ALSHSGLVEEGRYWFDLMVSK 407
S L+E+ R F+L+ K
Sbjct: 376 MYSKCDLLEDARMAFNLLPEK 396
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 301/544 (55%), Gaps = 3/544 (0%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I Y + ARKLF+ELP R + T+NS+I ++ E + Y M+ E V P
Sbjct: 40 KLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLP 99
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVA 133
D+ TF+ KA L ++ G+ AV LG D FV S+++++Y K KM +A +
Sbjct: 100 DAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLV 159
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F ++ KD+V ++++I G +G EA+ ++ M G+ +E + ++ C +LGD
Sbjct: 160 FRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDL 219
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG ++ L V QTSL+ MY++ ++ + VF + N VTW + + G
Sbjct: 220 VNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGL 279
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG + + EM C P+ +L S L AC+ + L++G+ IH T++ D N
Sbjct: 280 VQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNK 339
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
G ++I++Y KCG AR++FD + D+++ N +I +Y +G G EAL LF ++
Sbjct: 340 YAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNM 399
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P+ TF S+L A +++GLVEEG F + + + I+ T H+ CM+DLL R+ +EE
Sbjct: 400 GLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEE 459
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++ + P + +W LL+ C H + + EKV K+L+L P D G H L++N +A
Sbjct: 460 AAMLIEEVRN-PDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYAS 518
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KW +V ++ T+R +KK P S V+V+ E+H F+ D SH + +I +L L +
Sbjct: 519 AGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKK 578
Query: 553 MRAI 556
++ +
Sbjct: 579 VKTL 582
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 181/332 (54%), Gaps = 3/332 (0%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+G +++ Y+KCG + EA F+++ + +V W+SMI+ + +G+ +EAV+ Y M E
Sbjct: 36 FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLME 95
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAKTGHLDL 230
G+ D + +A + LG R G HG ++ L LD V ++LVDMYAK +
Sbjct: 96 GVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRD 155
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A VF+ + ++V + ALI G+AQ+GL G L++ +M + G +P+ +L L+ C
Sbjct: 156 AHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGN 215
Query: 291 IGFLKLGKSIHGYTVRRFDFNLVLG-TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
+G L G+ IHG V+ ++V TS++ MYS+C + + +F+Q+ + ++W
Sbjct: 216 LGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSF 275
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
+ +G E A+S+F +MI + P+ T +S+L A S ++E G + K
Sbjct: 276 VVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQ-IHAITMKLG 334
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+ + A +++L + G +++A + D ++
Sbjct: 335 LDGNKYAGAALINLYGKCGNMDKARSVFDVLT 366
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 137/259 (52%), Gaps = 3/259 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L + S ++ +Y N I + K+F +L T+ S ++ +
Sbjct: 229 VVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVA 288
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ ++ +MI+ + P+ T + L+AC SL L++GE+I ++LG + + G++++NL
Sbjct: 289 VSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINL 348
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M++A F+ + D+V +SMI NG EA++ ++R+K G+ + V
Sbjct: 349 YGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTF 408
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+ ++ AC + G G + SIR + N+++ + T ++D+ ++ L+ A+ + + +
Sbjct: 409 ISILLACNNAGLVEEGCQIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEV 467
Query: 239 SRINIVTWGALISGFAQNG 257
++V W L++ +G
Sbjct: 468 RNPDVVLWRTLLNSCKIHG 486
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+++H ++ F ++ LG +ID Y KCG + AR LFD++ SR +++WN +I+S+ H
Sbjct: 21 RAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISH 79
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G +EA+ + M+ V PD TF+++ A S GL+ G+ L V ++ +
Sbjct: 80 GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVV-LGLEVLDGF 138
Query: 417 YA-CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
A +VD+ A+ ++ +A +V E + ++ AL+ G H
Sbjct: 139 VASALVDMYAKFDKMRDA-HLVFRRVLEKDVVLFTALIVGYAQH 181
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 295/518 (56%), Gaps = 15/518 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES-PFEVLGLYNQMI 68
GNS ++ LY ND +AR LF +P+R + ++N++I YSR +S E ++ ++
Sbjct: 406 GNS---LLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLL 462
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
E + ST + +C DL G+ + ++ G+ V +S++++Y+ CG
Sbjct: 463 SEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCG--- 519
Query: 129 EAMVAFEKMQR----KDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGL 183
+++ AF ++ D++ W++ I G V NG +A++A++ M ++ D + ++ +
Sbjct: 520 DSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSV 579
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ C +L G S+H +++R + +++V+ +L+ MY + G + A +F ++ N+
Sbjct: 580 LSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNL 639
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
+W +ISGFAQN L+ +M+ FEP+ +S+V + AC Q+G L+ GK+IHG+
Sbjct: 640 CSWNCMISGFAQNNEGLRALQFYKKMEY--FEPNEISIVGIICACTQLGDLRQGKNIHGH 697
Query: 304 TVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
VR N+ + S++DMYSKCG + +F+ + + WN +I+++G HG G ++
Sbjct: 698 VVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKS 757
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
+ +F +M + VK STF +LLSA SHSGL +EG ++ LM+ + I PT +H+ C+VD
Sbjct: 758 IEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVD 817
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
+L RAG ++EA K V+S+ ++ VW ALLS C + + E VAK +L L P++ G
Sbjct: 818 MLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGY 877
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+ +SN +A + W VR ++ G+ K G S++
Sbjct: 878 YVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 231/480 (48%), Gaps = 10/480 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y D+ SA ++F+E + +N+ I A + + + L+ M+ D
Sbjct: 104 VITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVFD 163
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S++ + L L+ G A++ D+ + ++++++Y KCG + V F+
Sbjct: 164 STSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQ 223
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD-SR 194
+M +D W+SM++G +FNG + +K M + ADEV + ++ AC+ L D
Sbjct: 224 RMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFS 283
Query: 195 FGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
FG SVH I+ + + V+ SL+ Y + G + A VF + S N+VTW A+I G
Sbjct: 284 FGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGL 343
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--N 311
+N + + EM+S +PD +LV+ + AC G L GK +HGY +++
Sbjct: 344 VENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEE 402
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH-GEEALSLFLQMI 370
+G S++D+Y KC PS AR LF M RDLISWN +I+ Y + GEEA ++F ++
Sbjct: 403 CSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLL 462
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ ST +++ + + G+ ++ KY ++ + G+
Sbjct: 463 SEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFIL-KYGFLTGVSAANSLIHMYICCGDS 521
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK---KVLKLNPDDLGIHALVS 487
A +++S++ + W + GC + + + + L LNPD + + +++S
Sbjct: 522 LAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLS 581
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 175/368 (47%), Gaps = 8/368 (2%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D V +S++ Y + + A+ F++ DL+ W++ I+ L N + +AV ++ M
Sbjct: 97 DPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMV 156
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
D M+ ++ + G++ HG +++R L+ D+ + +L+DMYAK G
Sbjct: 157 DVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFY 216
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+ VF+ M + +W +++SG NGLA + EM F+ D VSL L AC+
Sbjct: 217 SSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACS 276
Query: 290 QI-GFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
+ G+S+H ++ D + S+I Y + G P A +F +++L++W
Sbjct: 277 HLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTW 336
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N +I + EA+ +F +M + +PD +T +++SA GL+ EG+ ++
Sbjct: 337 NAMIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDRGLLPEGKEVHGYIIK 395
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
K I ++DL + + A + +M L W ++SG + S+GE
Sbjct: 396 KGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMR-DLISWNTMISG--YSRNDSLGE 452
Query: 467 KVAKKVLK 474
+ AK + K
Sbjct: 453 E-AKAMFK 459
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 304/561 (54%), Gaps = 7/561 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + A K+F+ +P R V ++++++ + L L+++M ++ + P+
Sbjct: 47 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 106
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ LKAC L L+ G +I +++G+ V VG+S++++Y KCG++NEA F
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID--ADEVVMMGLIQACADLGDS 193
++ + L+ W++MI G V G +A+D + M++ I DE + L++AC+ G
Sbjct: 167 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226
Query: 194 RFGLSVHGYSIRR--HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HG+ +R H + SLVD+Y K G+L A F + +++W +LI
Sbjct: 227 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G+AQ G + L +Q + DS +L S + A L+ GK + V+
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ SV+DMY KCG+ A F +MQ +D+ISW V+I YG HG G++++ +F +M+
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
++PD + ++LSA SHSG+++EG F ++ + I+P +HYAC+VDLL RAG +
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++D+M +P + +W LLS C H +G++V K +L+++ + + ++SN +
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 526
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
W E R+ G+KK G S VE+ E+H F + SH I LK+
Sbjct: 527 GQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAE 586
Query: 551 LEMRAISSWLQGHMEEHEEHD 571
+R ++ G +HE HD
Sbjct: 587 RRLREELGYVYGL--KHELHD 605
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 198/389 (50%), Gaps = 9/389 (2%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G G ++ + ++++Y KC + A F+ M +++V WS++++G V NG + ++ +
Sbjct: 36 GSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLF 95
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
M ++GI +E ++AC L GL +HG+ ++ + V+V SLVDMY+K
Sbjct: 96 SEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE--PDSVSLVS 283
G ++ A VF+ + ++++W A+I+GF G L+ MQ + PD +L S
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 284 ALLACAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
L AC+ G + GK IHG+ VR + + S++D+Y KCG AR FDQ++
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+ +ISW+ +I Y G EA+ LF ++ E + D +S++ + L+ +G+
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
L V K +VD+ + G V+EA K M + ++ W +++G H
Sbjct: 336 QALAV-KLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKHG 393
Query: 461 KFSIGEKVAKKVLKLN--PDDLGIHALVS 487
++ ++L+ N PD++ A++S
Sbjct: 394 LGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 158/316 (50%), Gaps = 7/316 (2%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ +++ C G S G VH Y ++ L++ L+DMY K +A VF +M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+V+W AL+SG NG +L L EM G P+ + + L AC + L+ G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHG+ ++ F+ + +G S++DMYSKCG + A +F ++ R LISWN +IA + G+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 359 GEEALSLFLQMIETMVK--PDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQPTEK 415
G +AL F M E +K PD T SLL A S +G++ G+ +V S + +
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+VDL + G + A K D + E + W +L+ G +F + K++ +L
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 476 NP--DDLGIHALVSNF 489
N D + +++ F
Sbjct: 308 NSQIDSFALSSIIGVF 323
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G ++ LY + SARK F+++ + + +++S+I+ Y+++ E +GL+ ++ + +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ DS + + L+ G+++ AV+L G + V +S++++Y+KCG ++EA
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +MQ KD++ W+ +I G +G +++V + M + I+ DEV + ++ AC+ G
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 193 SRFG-------LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIV 244
+ G L HG R V+ +VD+ + G L A H+ M + N+
Sbjct: 430 IKEGEELFSKLLETHGIKPR------VEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 245 TWGALIS 251
W L+S
Sbjct: 484 IWQTLLS 490
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+LVS L C + G G +H Y ++ NL+ +IDMY KC P A +FD M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG- 397
R+++SW+ +++ + ++G + +LSLF +M + P+ TF++ L A +E+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 398 -------RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+ F++MV +VD+ ++ G + EA K+ + + L W
Sbjct: 128 QIHGFCLKIGFEMMVEVGN---------SLVDMYSKCGRINEAEKVFRRI-VDRSLISWN 177
Query: 451 ALLSG 455
A+++G
Sbjct: 178 AMIAG 182
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 286/520 (55%), Gaps = 38/520 (7%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y ++ A+ +F ++ + +NS+I YS ESP E L +Y +M ++ PD TF
Sbjct: 49 YSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTF 108
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
LKAC + +G+ + V+ G+ DV+ +++L +Y CG M A+ F+ + +
Sbjct: 109 PFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPK 168
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++V W+S+I G + N P EAV YK M+ + +E+ M+ ++ ACA D G V
Sbjct: 169 WNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWV 228
Query: 200 HGYS-------IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
H + + + N +V + T++VDMYAK
Sbjct: 229 HDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCA-------------------------- 262
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
+ Q G A L+L +M+ GF+PD + + + ACA +G L G+++H Y + +
Sbjct: 263 YNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDD 322
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+GT+++DMY+K G A+ +F ++Q +D+ +W +I +HGHGEEAL+ F +M E
Sbjct: 323 TAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQE 382
Query: 372 -TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
T + PD T+ +LSA SH G VE+G+ F M + + I+PT +HY CMVDLL+RAG +
Sbjct: 383 DTALIPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRL 442
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA ++V+ M EP A+W ALL+GC ++ + ++V ++V +L D G++ L+SN +
Sbjct: 443 GEAERLVEKMPVEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIY 502
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE---VNGELH 527
A +WEEV R+ M++ ++K G+S VE V G LH
Sbjct: 503 AGACRWEEVKMARELMKERKIQKSLGHSSVEMKMVGGALH 542
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 34/307 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT + ++ +Y D+ +A K+F+++P V + S+I + P E
Sbjct: 131 IVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEA 190
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-------DVFV 113
+ +Y M V P+ T L AC DL G + + ++G +V +
Sbjct: 191 VRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVIL 250
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
++++++Y KC A+ + GQ EA+D + M+ G
Sbjct: 251 ATAIVDMYAKC--------AYNQY------------------GQANEALDLFSDMRIAGF 284
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D D+ + +I ACA LG G ++H Y + +L D + T+LVDMYAK+G + A
Sbjct: 285 DPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQ 344
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIG 292
VF + + ++ W +LI G A +G L +MQ PD ++ + L AC+ +G
Sbjct: 345 VFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVG 404
Query: 293 FLKLGKS 299
++ GK+
Sbjct: 405 KVEDGKN 411
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 290/550 (52%), Gaps = 11/550 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
+I +Y ++ A ++F +P R V ++ ++++ + R E L L M DV P
Sbjct: 45 LIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAP 104
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T + +LKAC + D+ G I V G+ V +S++ LY K G++ +A F
Sbjct: 105 NEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVF 164
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-----EGIDADEVVMMGLIQACAD 189
+ ++LV W++MI+G G R+++ ++ M++ E DE L++AC
Sbjct: 165 DGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGS 224
Query: 190 LGDSRFGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHL-DLASHVFKNMSRINIVTW 246
LG +R G VH + R ++ + + +L+DMY K L +A VF + + N + W
Sbjct: 225 LGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQW 284
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+I G AQ G +EL S G D L S + A ++ G+ +H YTV+
Sbjct: 285 TTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVK 344
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
++ + S+IDMY KCG+ A F ++ +R+++SW +I G HGHG+EA+ +
Sbjct: 345 TPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHM 404
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M V+PD + +LLSA SHSGLVEE R +F + +++P +HYACMVDLL
Sbjct: 405 FEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLG 464
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAGE+ EA +V +M P + VW LLS C HK ++G + + +L ++ D+ + +
Sbjct: 465 RAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVM 524
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVY 544
+SN FA W E VR MR+ G++K G S VEV E H F D SH + DI
Sbjct: 525 LSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICC 584
Query: 545 VLKKLYLEMR 554
VL+ + MR
Sbjct: 585 VLRDVERTMR 594
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 205/421 (48%), Gaps = 22/421 (5%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+A + + G ++ ++LG+G+D +G++++++Y KCG++ A F M +++
Sbjct: 11 LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
V W++++ G + +G RE + M+ + +E + ++AC +GD G+ +HG
Sbjct: 71 VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+R V SLV +Y+K G + A VF N+VTW A+ISG+A G
Sbjct: 131 ACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRD 190
Query: 262 TLELLMEMQSCGFE-----PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---FDFNLV 313
+L + EMQ E PD + S L AC +G + G +H V R N +
Sbjct: 191 SLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAI 250
Query: 314 LGTSVIDMYSKC-GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L +++DMY KC + A +F++++ ++ I W +I + G +EA+ LF + +
Sbjct: 251 LAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSS 310
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ-PTEKHYAC---MVDLLARAG 428
V+ D +S++ + LVE+GR V Y ++ P + ++D+ + G
Sbjct: 311 GVRADGHVLSSVVGVFADFALVEQGR-----QVHCYTVKTPAGLDVSVANSLIDMYHKCG 365
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+EA + + + W A+++G H H + +I + + PD++ AL+
Sbjct: 366 LTDEAARRFREVPAR-NVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALL 424
Query: 487 S 487
S
Sbjct: 425 S 425
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 295/527 (55%), Gaps = 5/527 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K + + V + ++Y + AR LF ELP + + ++ S+I AY R + +
Sbjct: 242 VKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAV 301
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ M + ++PD + L + ++ G+ V +G+ V +G++++++Y
Sbjct: 302 ELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK---KEGIDADEV 178
KC +++ A F + ++D WSSM+ G + ++ Y+ M+ K+ + D
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTN 421
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ +I +C+ LG R G S H YSI+ + V +L+ MY + G+ D+A +F +
Sbjct: 422 SLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMV 481
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++VTW ALIS ++ G + L L +M + G +P+S +LVS + +CA + L+ G+
Sbjct: 482 KTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH + + +L + T+++DMY KCG AR +FD M RD+++WNV+I+ YG+HG
Sbjct: 542 LIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHG 601
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+AL LF M VKP+ TF ++LSA H+GLV++GR F M +Y ++P KHY
Sbjct: 602 EAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHY 660
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
ACMVDLL ++G ++EA +V +M EP +W LL C H F +G +VAKK +P
Sbjct: 661 ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDP 720
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
++ G + L+SN + +KW E+ +R M+ G++K G+S +++ G
Sbjct: 721 ENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 256/490 (52%), Gaps = 28/490 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE----D 71
++ +Y + A +LF+E+P R V + ++I E L +M++
Sbjct: 151 LVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGG 210
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP+S T L+AC L +L +G + V+ G G+ V SS+ ++Y KC +A
Sbjct: 211 ARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDAR 270
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F ++ KDLV W+S+I G +AV+ + M++ G+ DEVV+ L+ +
Sbjct: 271 ILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDA 330
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G + H +RR+ V + +L+ MYAK +D+A+ VF+ + + + +W +++
Sbjct: 331 KVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVV 390
Query: 252 GFAQNGLAGSTLELLMEMQ---SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+ + GL LEL EMQ FE D+ SL+S + +C+++G L+LG+S H Y+++
Sbjct: 391 AYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHL 450
Query: 309 -DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N + ++I MY +CG AR +F ++++D+++W+ +I+SY GH ++AL L+
Sbjct: 451 AGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYD 510
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA---CMVDLL 424
QM+ VKP+ +T S++S+ ++ +E G +L+ S K E + +VD+
Sbjct: 511 QMLTEGVKPNSATLVSVISSCANLAALEHG----ELIHSHVKDVGLECDLSICTALVDMY 566
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH-------KKFSIGEKVAKKVLKLNP 477
+ G++ A K+ DSM E + W ++SG H K FS+ E+ + P
Sbjct: 567 MKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMHGEAIQALKLFSMMERG-----NVKP 620
Query: 478 DDLGIHALVS 487
+ L A++S
Sbjct: 621 NSLTFLAILS 630
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 220/520 (42%), Gaps = 54/520 (10%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ + LS + ++++ Y A F P +NS++ + R L
Sbjct: 33 VTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTL 92
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY---GNDVFVGSSML 118
+ +M RP T + A L L +G + +V G V V SS++
Sbjct: 93 SAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLV 152
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--- 175
+Y +CG + +A+ F++M +D+V W+++I+G V NGQ E + RM + D
Sbjct: 153 YMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGAR 212
Query: 176 -DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ M ++AC LG+ G +HG+ ++ + V +SL MY K + A +
Sbjct: 213 PNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARIL 272
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F + ++V+W +LI + + G A +EL + M+ G +PD V + L +
Sbjct: 273 FPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK+ H VRR F ++++G ++I MY+KC A +F + RD SW+ ++ +Y
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392
Query: 354 GIHGHGEEALSLFLQM--------------------------------------IETMVK 375
G + L L+ +M I+ +
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
+ S +L+S G + R F ++ +K + ++ ++ + G ++AL
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT-----WSALISSYSHLGHSKDALL 507
Query: 436 IVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+ D M TE P A V+++S C N GE + V
Sbjct: 508 LYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 43/292 (14%)
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W +L+ + STL M++ G P + A A++G L +G ++H Y+V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 306 R----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
R D ++ + +S++ MY++CG A LFD+M RD+++W +I+ +G E
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 362 ALSLFLQMIETM----VKPDHSTFASLLSALSHSGLVEEGR--YWFDL------------ 403
LS ++M+ + +P+ T S L A G + G + F +
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254
Query: 404 -MVSKY-KIQPTEK--------------HYACMVDLLARAGEVEEALKIVDSMST---EP 444
+ S Y K TE + ++ RAG E+A+++ M +P
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQP 314
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD--LGIHALVSNFFAMEQ 494
V LL+G N K G+ +++ N D L +AL+S + +Q
Sbjct: 315 DEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQ 366
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 314/549 (57%), Gaps = 16/549 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
R+I+ Y D + ++ +F+ + + V +NS+I Y + + L+ QM + P
Sbjct: 66 RLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLP 124
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T K + DL +G+ I K++ +G+ +D+ VG+S++++Y++C + +AM F
Sbjct: 125 DDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVF 184
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDA-----YKRMKKEGIDADEVVMMGLIQACAD 189
++M ++++ ++ +I+G G ++ A ++RM+ +G +AD + L+ C D
Sbjct: 185 DEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCD 244
Query: 190 LGDSRF--GLSVHGYSIRRHLNL----DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
D +F G +H Y ++ L+L DV + +SL+DMY+++ L L+ VF M NI
Sbjct: 245 -SDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNI 303
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W A+I+G+ QNG L L EMQ P+ VSLVS L AC + L GK +H
Sbjct: 304 YVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHA 363
Query: 303 YTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
++++ F+ + L ++IDMY+KCG AR +FD S+D I+W+ II++YG+HG G+
Sbjct: 364 FSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQ 423
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL+ + +M++ +KPD T +LSA SGLV+EG ++ + ++Y+++P+ + C+
Sbjct: 424 EALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCV 483
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL R+G++++AL + M PG +VW +LL+ H + + +L+L P++
Sbjct: 484 VDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENP 543
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYE 540
+ +SN +A ++W+E+ VR M++ G++KVPG S + ++ + H F + DK H
Sbjct: 544 SNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSS 603
Query: 541 DIVYVLKKL 549
I +L L
Sbjct: 604 SIYEMLDDL 612
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 185/395 (46%), Gaps = 22/395 (5%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ + L LK+ ++ + + + + F+ + +++ Y G + + F+ + K++
Sbjct: 33 LQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNV 92
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+S+ING V N Q A+ +++M + + D+ + + + ++ D G +HG
Sbjct: 93 YLWNSLINGYVKNHQFDNAIVLFRQMGR-CLLPDDYTLATISKVSGEIQDLVLGKLIHGK 151
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG----- 257
S+R D+ V S++ MY + A VF M + N+ ++ +ISG A G
Sbjct: 152 SLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYS 211
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSAL-LACAQIGFLKLGKSIHGYTVRR-FDFNLV-- 313
L MQ G+ D+ ++ S L + C G G+ +H Y V+ D +
Sbjct: 212 LYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSD 271
Query: 314 --LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI- 370
+G+S+IDMYS+ +R +FDQM+SR++ W +I Y +G E AL LF +M
Sbjct: 272 VHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQR 331
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA----CMVDLLAR 426
+ ++P+ + S+L A + G+ V + I+ Y ++D+ A+
Sbjct: 332 KDRIRPNRVSLVSVLPACGLLVGLMGGK-----QVHAFSIKMEFNDYISLRNALIDMYAK 386
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
G ++ A ++ D+ S W +++S H K
Sbjct: 387 CGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGK 421
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 12/286 (4%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ L+Q DL + H + + + + T L+ YA G ++ VF ++
Sbjct: 29 LLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVH 88
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+ W +LI+G+ +N + + L +M C PD +L + +I L LGK
Sbjct: 89 TKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRC-LLPDDYTLATISKVSGEIQDLVLGKL 147
Query: 300 IHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHG ++R F ++V+G SV+ MY +C A +FD+M R++ S+NVII+ G+
Sbjct: 148 IHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGN 207
Query: 359 GEEAL-----SLFLQMIETMVKPDHSTFASLLSALSHS-GLVEEGRYWFDLMVSK---YK 409
+ +L + F +M D T ASLL S G + GR +V K
Sbjct: 208 LDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLK 267
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + ++D+ +R+ ++ + ++ D M + + VW A+++G
Sbjct: 268 MCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSR-NIYVWTAMING 312
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 273/523 (52%), Gaps = 4/523 (0%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLK-MG 95
P V +Y + I ++ P L + M++ +RP+ TF A KA S +G
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 96 EEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVF 154
+I A+ GY D FV + L++Y K G++ A F +M +++V W++++ V
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+G+P E ++AY +++ G + V ACA G HG+ ++ +DV V
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 257
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
S+VD Y K A VF M N V+W ++++ +AQNG + + G
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 317
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
EP + SAL CA + L LG+++H VR D N+ + ++++DMY KCG A
Sbjct: 318 EPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQ 377
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSG 392
+F + R+L++WN +I Y G + AL +F MI + P++ T +++++ S G
Sbjct: 378 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGG 437
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
L ++G F+ M ++ I+P +HYAC+VDLL RAG E+A +++ M P ++VW AL
Sbjct: 438 LTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGAL 497
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L C H K +G A+K+ +L+P D G H L+SN FA +W E +RK M+ G+K
Sbjct: 498 LGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIK 557
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
K PG S V +H F +D H Y +I +L KL +M+A
Sbjct: 558 KDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQA 600
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 183/385 (47%), Gaps = 6/385 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D A ++ ++ ++G +A+ L F+ + ++NLY K A A
Sbjct: 14 DPQLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAA 73
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD- 192
+V +++ I+G +G+P A+ A+ M + G+ ++ +A A
Sbjct: 74 LASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPR 133
Query: 193 SRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
S G +H +IR +L +D V + +DMY KTG L LA H+F M N+V W A+++
Sbjct: 134 STIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+G T+E ++ G P+ VS + ACA +L LG+ HG+ V+ F+
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + S++D Y KC ARA+FD M R+ +SW ++A+Y +G EEA + +L
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGAR 313
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +P +S L+ + + GR + V + I + +VD+ + G V
Sbjct: 314 RSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAV-RSCIDANIFVASALVDMYGKCGCV 372
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E+A +I + + L W A++ G
Sbjct: 373 EDAEQIFYE-TPQRNLVTWNAMIGG 396
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 294/518 (56%), Gaps = 15/518 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES-PFEVLGLYNQMI 68
GNS ++ LY ND +AR LF +P+R + ++N++I YSR +S E ++ ++
Sbjct: 406 GNS---LLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLL 462
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
E + ST + +C DL G+ + ++ G+ V +S++++Y+ CG
Sbjct: 463 SEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCG--- 519
Query: 129 EAMVAFEKMQR----KDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGL 183
+++ AF ++ D++ W++ I G V NG +A++A++ M ++ D + ++ +
Sbjct: 520 DSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSV 579
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ C +L G S+H +++R + +++V+ +L+ MY + G + A +F ++ N+
Sbjct: 580 LSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNL 639
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
+W +ISGFAQN + +M+ FEP+ +S+V + AC Q+G L+ GK+IHG+
Sbjct: 640 CSWNCMISGFAQNNEGLRAFQFYKKMED--FEPNEISIVGIICACTQLGDLRQGKNIHGH 697
Query: 304 TVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
VR N+ + S++DMYSKCG + +F+ + + WN +I+++G HG G ++
Sbjct: 698 VVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKS 757
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
+ +F +M + VK STF +LLSA SHSGL +EG ++ LM+ + I PT +H+ C+VD
Sbjct: 758 IEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVD 817
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
+L RAG ++EA K V+S+ ++ VW ALLS C + + E VAK +L L P++ G
Sbjct: 818 MLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGY 877
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+ +SN +A + W VR ++ G+ K G S++
Sbjct: 878 YVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 230/480 (47%), Gaps = 10/480 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y D+ SA ++F+E + +N+ I A + + + L+ M+ D
Sbjct: 104 VITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVID 163
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S++ + L L+ G A++ D+ + ++++++Y KCG + V F+
Sbjct: 164 STSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQ 223
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD-SR 194
+M +D W+SM++G +FNG + +K M + ADEV + ++ AC+ L D
Sbjct: 224 RMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFS 283
Query: 195 FGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
FG SVH I+ + + V SL+ Y + G + A VF + S N+VTW A+I G
Sbjct: 284 FGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGL 343
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--N 311
+N + + EM+S +PD +LV+ + AC G L GK +HGY +++
Sbjct: 344 VENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEE 402
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH-GEEALSLFLQMI 370
+G S++D+Y KC PS AR LF M RDLISWN +I+ Y + GEEA ++F ++
Sbjct: 403 CSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLL 462
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ ST +++ + + G+ ++ KY ++ + G+
Sbjct: 463 SEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFIL-KYGFLTGVSAANSLIHMYICCGDS 521
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK---KVLKLNPDDLGIHALVS 487
A +++S++ + W + GC + + + + L LNPD + + +++S
Sbjct: 522 LAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLS 581
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 179/376 (47%), Gaps = 8/376 (2%)
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
A++ G D V +S++ Y + + A+ F++ DL+ W++ I+ L N + +A
Sbjct: 89 ALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDA 148
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
V ++ M D M+ ++ + G++ HG +++R L+ D+ + +L+DM
Sbjct: 149 VVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDM 208
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
YAK G + VF+ M + +W +++SG NGLA + EM F+ D VSL
Sbjct: 209 YAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSL 268
Query: 282 VSALLACAQI-GFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
L AC+ + G+S+H ++ D + S+I Y + G P A +F
Sbjct: 269 SCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLST 328
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+++L++WN +I + EA+ +F +M + +PD +T +++SA GL+ EG+
Sbjct: 329 SNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDHGLLPEGK 387
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
++ K I ++DL + + A + +M L W ++SG
Sbjct: 388 EVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMR-DLISWNTMISG--Y 444
Query: 459 HKKFSIGEKVAKKVLK 474
+ S+GE+ AK + K
Sbjct: 445 SRNDSLGEE-AKAMFK 459
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/589 (31%), Positives = 307/589 (52%), Gaps = 48/589 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY ++ A K+FEE+P V ++ +I ++R +VLGL+ +M + V P+
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 76 SSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC---------- 124
T ++ LK+C S + D ++G+ I + G D + +S+L+ YVKC
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446
Query: 125 ---------------------GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G M +++ F ++ KD W++MI+GL+ NG R A++
Sbjct: 447 GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALE 506
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+M G +++ + + L G +H ++ + D V+ SL+DMY
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566
Query: 224 KTGHLDLASHVFKNMSR---------------INIVTWGALISGFAQNGLAGSTLELLME 268
K G ++ AS +FK++ + + V+W +++SG+ QNG L+
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSF 626
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
M E D +L S + ACA G L+LG+ +HGY + ++ LG+S+IDMY KCG
Sbjct: 627 MICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGS 686
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ A +F+Q + R+++ W +I+ +HG G EA+ LF MI + P+ +F +L+A
Sbjct: 687 LNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTA 746
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH+GL+EEG +F LM Y I+P +H+ CMVDL RAG + E + + + + +
Sbjct: 747 CSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSS 806
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW + LS C HK +G V KK+L+L P D G + L S+ A E +WEE A +R M+
Sbjct: 807 VWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQ 866
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+ G+KK P S +++ ++H+F+M D+SH Q I L +L ++ I
Sbjct: 867 QRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEI 915
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 186/402 (46%), Gaps = 62/402 (15%)
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
G+ +LNLY K + +A FE++ + D+ W+ +I+G G + + + +M+ +G+
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383
Query: 174 DADEVVMMGLIQAC-ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT------- 225
++ + ++++C +++ DSR G +HG+ +R L+LD + S++D Y K
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443
Query: 226 ------------------------GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
G + + +F+ + + +W +I G +NG
Sbjct: 444 KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVI 319
LELL +M + G + ++ AL+ + + L LGK IH ++ D V S+I
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVR-NSLI 562
Query: 320 DMYSKCGVPSCARALFDQMQSR---------------DLISWNVIIASYGIHGHGEEALS 364
DMY KCG A +F + + +SW+ +++ Y +G E+AL
Sbjct: 563 DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-----AC 419
F MI + V+ D T S++SA + +G++E GR V Y IQ +
Sbjct: 623 TFSFMICSQVEVDKFTLTSVVSACASAGVLELGR-----QVHGY-IQKIGHGLDVFLGSS 676
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++D+ + G + +A I + + + + +W +++SGC H +
Sbjct: 677 IIDMYVKCGSLNDAWLIFNQ-AKDRNVVLWTSMISGCALHGQ 717
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ G ++++Y+K A +F+++ D+ SW V+I+ + G + L LF +M +
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 373 MVKPDHSTFASLLSALS 389
V P+ T + +L + S
Sbjct: 382 GVCPNQFTLSIVLKSCS 398
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 299/535 (55%), Gaps = 5/535 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L+ N ++ +YG D+ ++ ++F+ + + ++NS I + +VL
Sbjct: 68 VKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVL 127
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ +M + +V P S T + L A V L +G E+ +++ D+FV +S++++Y
Sbjct: 128 RMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMY 187
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G + +A FE+M+ +++V W++MI LV NG EA M+K G + + ++
Sbjct: 188 AKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLV 247
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
++ ACA + + G +H +SIRR L D+ + +L+DMY+K G L LA ++F+ S
Sbjct: 248 NVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEK 306
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V++ LI G++Q+ +L L +M+S G + D+VS + AL AC + K GK IH
Sbjct: 307 DDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIH 366
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
VRR + L S++D+Y+K G+ A +F+++ +D+ SWN +I YG+HG +
Sbjct: 367 CVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQID 426
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
A LF M + DH ++ ++L+A SH GLV++G+ +F MV++ I+P + HYACM
Sbjct: 427 IAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACM 485
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL RAG++ + +I+ M VW ALL C H + + A+ + +L P+
Sbjct: 486 VDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHS 545
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN--GELHAFIMED 533
G + L+ N +A +W E +RK M+ ++K P YS V+ +L AF++ D
Sbjct: 546 GYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 600
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 233/438 (53%), Gaps = 18/438 (4%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYN-------QMIKEDVRPDSSTFTVALKACVS 88
+P R V ++NS++ S F V G+++ M++ + ++ + AC +
Sbjct: 1 MPERDVVSWNSLV-------SAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGT 53
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ K G I AV++G V + ++++++Y K G + +M F+ M ++ V W+S
Sbjct: 54 EQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSA 113
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I + G + + +++M + + + + L+ A +LG G VHGYSI+R +
Sbjct: 114 IGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAM 173
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+LD+ V SLVDMYAK G L+ AS +F+ M N+V+W A+I+ QNG L+ +
Sbjct: 174 DLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTD 233
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
MQ G P+S++LV+ L ACA++ LK+GK IH +++RR F+L + ++IDMYSKCG
Sbjct: 234 MQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQ 293
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S AR +F++ + +D +S+N +I Y E+L LF QM + D +F LSA
Sbjct: 294 LSLARNIFERSE-KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSA 352
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
++ + + G+ ++V + + ++DL + G + A KI + + T+ +A
Sbjct: 353 CTNLSVFKHGKEIHCVLVRRL-LSGHPFLSNSLLDLYTKGGMLVTASKIFNKI-TKKDVA 410
Query: 448 VWVALLSGCHNHKKFSIG 465
W ++ G H + I
Sbjct: 411 SWNTMILGYGMHGQIDIA 428
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 301/557 (54%), Gaps = 15/557 (2%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTY--NSIIIAYSRKESPFEVL 61
T A +S+ + LY IV AR++F+ P R D + NS+I AY E
Sbjct: 188 TKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRD-DAFLCNSMIKAYVGMRQYSESF 246
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LY + + PDS TF+V K+C M + G+EI V +G+ D++ ++++++
Sbjct: 247 ALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDM 306
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K GKM+ A F++M + V W+++I G V +G A + +M I+ D
Sbjct: 307 YAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAF 362
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+I A LGD + R V T ++ Y+ G+LD A +F M
Sbjct: 363 NTMIDAYVKLGDMCSARKLFDEMPER----SVVSWTIMIYGYSSNGNLDSARSLFDAMPE 418
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKS 299
N+ +W A+ISG+ QN L+L EMQS EPD V++VS L A A +G L LG
Sbjct: 419 KNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGW 478
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H + R+ D +GT++IDMY+KCG +R +FD M ++ SWN +I ++ I+G
Sbjct: 479 VHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGR 538
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+EAL LF++M P+ T +LSA +HSGLVEEG+ WF M ++ + P +HY
Sbjct: 539 AKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAM-EEFGLTPKIEHYG 597
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL RAG ++EA K+++SM E + + L C K + E+V K+ +K+
Sbjct: 598 CMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAW 657
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + ++ N +A E++W+E V+ MR++G+KK G S +EV+ + F+ D+ H +
Sbjct: 658 NDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPK 717
Query: 539 YEDIVYVLKKLYLEMRA 555
+E I VL +L++ M+
Sbjct: 718 WEAIHSVLGQLWVHMKG 734
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 308/578 (53%), Gaps = 8/578 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y G A +F+++P + + ++NS++ ++ + LG+ MI+ +
Sbjct: 403 LLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVN 462
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT AL AC S G + V G ++ +G++++++Y K G M+ +
Sbjct: 463 YVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLL 522
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS-R 194
+M R+D+V W+++I G N P +A+ A++ ++ EG+ A+ + ++ ++ AC GD
Sbjct: 523 QMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLE 582
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y + D V+ SL+ MYAK G L + +F + +I+TW A+++ A
Sbjct: 583 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANA 642
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+G L+L+ +M+S G D S L A A++ L+ G+ +HG V+ F+ +
Sbjct: 643 HHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCF 702
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ + DMYSKCG + +R L SWN++I++ G HG+ EE F +M+E
Sbjct: 703 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMG 762
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KP H TF SLL+A SH GLV++G ++D++ + ++P +H C++DLL R+G + EA
Sbjct: 763 IKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEA 822
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ M +P VW +LL+ C H+ G K A+ + KL P+D + L SN FA
Sbjct: 823 ETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATT 882
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL---KKLY 550
+WE+V VRK M +KK S V++ ++ +F + D++H Q +I L KKL
Sbjct: 883 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 942
Query: 551 LE---MRAISSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
E + S LQ EE +EH+ + + + A Y L
Sbjct: 943 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 980
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 235/463 (50%), Gaps = 9/463 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ LYG + +RK+FEE+P R V ++ S+++ YS K P EV+ +Y M E V +
Sbjct: 201 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECN 260
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++ ++ + +C L D +G +I + ++ G + + V +S+++++ G ++ A F
Sbjct: 261 ENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFN 320
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ +D + W+S++ NG E+ + M++ + + + L+ D+ ++
Sbjct: 321 QISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKW 380
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++ + V V +L+ MYA G + A VFK M ++++W +L++ F
Sbjct: 381 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVN 440
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
+G + L +L M G + V+ SAL AC F G+ +HG V FD N +
Sbjct: 441 DGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFD-NQI 499
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G +++ MY K G S +R + QM RD+++WN +I Y + ++AL+ F +
Sbjct: 500 IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEG 559
Query: 374 VKPDHSTFASLLSA-LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V ++ T S+LSA L L+E G+ +VS + E ++ + A+ G++
Sbjct: 560 VSANYITVVSVLSACLVPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSS 618
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+ + + + + W A+L+ +H GE+V K V K+
Sbjct: 619 SQDLFNGLDNRS-IITWNAILAANAHHGH---GEEVLKLVSKM 657
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 228/464 (49%), Gaps = 4/464 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ L + +I+++G ++ A +F ++ R ++NSI+ AY++ E
Sbjct: 287 VIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEES 346
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++N M + +S+T + L + K G I V++G+ + V V +++L +
Sbjct: 347 SRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 406
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y G+ EA + F++M KDL+ W+S++ V +G+ +A+ M + G + V
Sbjct: 407 YAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTF 466
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ AC G +HG + L + + +LV MY K G + + V M R
Sbjct: 467 TSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPR 526
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKS 299
++V W ALI G+A+N L ++ G + +++VS L AC G L+ GK
Sbjct: 527 RDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKP 586
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H Y V F+ + + S+I MY+KCG S ++ LF+ + +R +I+WN I+A+ HGH
Sbjct: 587 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGH 646
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
GEE L L +M + D +F+ LSA + ++EEG+ L V K + +
Sbjct: 647 GEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-KLGFELDCFIFN 705
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
D+ ++ GE+ E +K++ S L W L+S H F
Sbjct: 706 AAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYF 748
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 204/392 (52%), Gaps = 2/392 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + AR LF+++P+R ++N+++ R E + + +M ++P
Sbjct: 99 LINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPS 158
Query: 76 SSTFTVALKAC-VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
S + AC S + G ++ + G +DV+V +++L+LY G ++ + F
Sbjct: 159 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 218
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E+M +++V W+S++ G G+P E +D YK M+ EG++ +E M +I +C L D
Sbjct: 219 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDES 278
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G + G I+ L + V+ SL+ M+ G++D A+++F +S + ++W ++++ +A
Sbjct: 279 LGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYA 338
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QNG + + M+ E +S ++ + L + K G+ IHG V+ FD +
Sbjct: 339 QNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVC 398
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++ MY+ G A +F QM ++DLISWN ++AS+ G +AL + MI T
Sbjct: 399 VCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTG 458
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
++ TF S L+A ++GR L+V
Sbjct: 459 KSVNYVTFTSALAACFSPEFFDKGRILHGLVV 490
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 174/342 (50%), Gaps = 4/342 (1%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
++++N+Y K G++ A F+KM ++ V W++M++G+V G E ++ +++M GI
Sbjct: 97 NTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIK 156
Query: 175 ADEVVMMGLIQACADLGDS-RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
V+ L+ AC G R G+ VHG+ + L DV V T+++ +Y G + +
Sbjct: 157 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 216
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF+ M N+V+W +L+ G++ G +++ M+ G E + S+ + +C +
Sbjct: 217 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKD 276
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
LG+ I G ++ + L + S+I M+ G A +F+Q+ RD ISWN I+A+
Sbjct: 277 ESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAA 336
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y +GH EE+ +F M + + +T ++LLS L + GR L+V K
Sbjct: 337 YAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVV-KMGFDS 395
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
++ + A AG EEA + M T+ L W +L++
Sbjct: 396 VVCVCNTLLRMYAGAGRSEEADLVFKQMPTKD-LISWNSLMA 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 102/194 (52%), Gaps = 2/194 (1%)
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G ++H ++ + L V +L++MY K G + A ++F M N V+W ++SG +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKSIHGYTVRR-FDFNLV 313
GL +E +M G +P S + S + AC + G + G +HG+ + ++
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ T+++ +Y G+ SC+R +F++M R+++SW ++ Y G EE + ++ M
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 374 VKPDHSTFASLLSA 387
V+ + ++ + ++S+
Sbjct: 257 VECNENSMSLVISS 270
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 273/523 (52%), Gaps = 4/523 (0%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLK-MG 95
P V +Y + I ++ P L + M++ +RP+ TF A KA S +G
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 96 EEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVF 154
+I A+ GY D FV + L++Y K G++ A F +M +++V W++++ V
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+G+P E ++AY +++ G + V ACA G HG+ ++ +DV V
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 257
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
S+VD Y K A VF M N V+W ++++ +AQNG + + G
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 317
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
EP + SAL CA + L LG+++H VR D N+ + ++++DMY KCG A
Sbjct: 318 EPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQ 377
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSG 392
+F + R+L++WN +I Y G + AL +F MI + P++ T +++++ S G
Sbjct: 378 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGG 437
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
L ++G F+ M ++ I+P +HYAC+VDLL RAG E+A +++ M P ++VW AL
Sbjct: 438 LTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGAL 497
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L C H K +G A+K+ +L+P D G H L+SN FA +W E +RK M+ G+K
Sbjct: 498 LGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIK 557
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
K PG S V +H F +D H Y +I +L KL +M+A
Sbjct: 558 KDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQA 600
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 183/385 (47%), Gaps = 6/385 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D A ++ ++ ++G +A+ L F+ + ++NLY K A A
Sbjct: 14 DPQLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAA 73
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD- 192
+V +++ I+G +G+P A+ A+ M + G+ ++ +A A
Sbjct: 74 LASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPR 133
Query: 193 SRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
S G +H +IR +L +D V + +DMY KTG L LA H+F M N+V W A+++
Sbjct: 134 STIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+G T+E ++ G P+ VS + ACA +L LG+ HG+ V+ F+
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + S++D Y KC ARA+FD M R+ +SW ++A+Y +G EEA + +L
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGAR 313
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +P +S L+ + + GR + V + I + +VD+ + G V
Sbjct: 314 RSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAV-RSCIDANIFVASALVDMYGKCGCV 372
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E+A +I + + L W A++ G
Sbjct: 373 EDAEQIFYE-TPQRNLVTWNAMIGG 396
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 293/517 (56%), Gaps = 12/517 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ + ++Y A LF ELP + V ++ S+I Y R+ E + L+ QM++ +
Sbjct: 258 ISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGL 317
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD + L + ++ G+ + +G+ V +G++++++Y K ++ A
Sbjct: 318 QPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGR 377
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-----IDADEVVMMGLIQAC 187
F + ++D W+ M+ G G + ++ Y+ M+ AD +V I +C
Sbjct: 378 VFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLV--SAISSC 435
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI--NIVT 245
+ L + R G S H YSI+ L+ D V L+ MY + G D A +F ++++ ++VT
Sbjct: 436 SRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIF-GLAKLKGDVVT 494
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W LIS +A G + + + L +M G P+S +L++ + ACA + L+ G+ IH Y
Sbjct: 495 WNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVK 554
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+D+++ + T++IDMY+KCG AR +FD M D+++WNV+I+ YG+HG ++AL
Sbjct: 555 EMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 614
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF +M +KP+ TF ++LSAL HSGL+EEGR F M KY ++P KHYACMVDLL
Sbjct: 615 LFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRM-GKYSLEPNLKHYACMVDLL 673
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
++G ++EA +V +M EP +W LLS C H F +G ++AKK +P++ G +
Sbjct: 674 GKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYI 733
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
L+SN + +KW+E+ +R+TM+ G++K G+S V+
Sbjct: 734 LISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAVD 770
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 244/481 (50%), Gaps = 27/481 (5%)
Query: 10 GNSVG---RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
G+SV ++ +Y ++ A K+FEE+P R V + ++I R E L +
Sbjct: 147 GDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVE 206
Query: 67 MIK----EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
M++ VRP+S T L+AC L +L G + V++G G+ V S++ ++Y
Sbjct: 207 MVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYS 266
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KC +A F ++ KD+V W+S+I G EA++ +++M + G+ DE+++
Sbjct: 267 KCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSC 326
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ + G+ G + H +R+ V + +L+ MY K +D A VF+ + + +
Sbjct: 327 VLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRD 386
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQ---SCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+W ++ G+ + G LEL EMQ F + SLVSA+ +C+++ L+LG+S
Sbjct: 387 ADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRS 446
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHG 357
H Y+++ D + + +I MY +CG A +F + + D+++WN +I+SY G
Sbjct: 447 AHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLG 506
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR---YWFDLMVSKYKIQPTE 414
H A+SL+ QM+ + P+ +T +++SA ++ +E G + M Y +
Sbjct: 507 HSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINT 566
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
++D+ A+ G++ A +I DSM + + W ++SG H GE AK+ L+
Sbjct: 567 A----LIDMYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGYGMH-----GE--AKQALE 614
Query: 475 L 475
L
Sbjct: 615 L 615
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 218/480 (45%), Gaps = 20/480 (4%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
F P +NS+I + L + +M+ RP T +A A L L
Sbjct: 68 FSASPRPDAFLWNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGAL 127
Query: 93 KMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+G + R + +G G+ V V SS++ +Y +CG + +A+ FE+M +D+V W+++
Sbjct: 128 GVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAV 187
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDA----DEVVMMGLIQACADLGDSRFGLSVHGYSI 204
I+G V NG+ E + M + D + M ++AC L + G +HGY +
Sbjct: 188 ISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVV 247
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ + V ++L MY+K + A +F + ++V+W +LI + + GL +E
Sbjct: 248 KVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAME 307
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYS 323
L +M G +PD + + L G + GK+ H T R F ++++G ++I MY
Sbjct: 308 LFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYG 367
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA- 382
K + A +F + RD SWN+++ Y G + L L+ +M + K + A
Sbjct: 368 KFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREM-QLRDKYEFWCVAD 426
Query: 383 SLLSALSHSGLVEE---GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
SL+SA+S + E GR + K+ + ++ + R G+ + A KI
Sbjct: 427 SLVSAISSCSRLAELRLGRSAHCYSI-KHLLDEDSSVANVLIGMYGRCGKFDHACKIFGL 485
Query: 440 MSTEPGLAVWVALLSG----CHNHKKFSIGEKVAKKVLKLNPDDL-GIHALVSNFFAMEQ 494
+ + W L+S H++ S+ +++ + L N L + + +N A+E+
Sbjct: 486 AKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALER 545
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 11/305 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ + +++ Y G+ A +AF R D W+S+I A+ A++RM G
Sbjct: 47 LAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDFVAALSAHRRMLASG 106
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL----DVKVQTSLVDMYAKTGHL 228
A A+LG G +VH Y +R L + V V +SLV MYA+ G++
Sbjct: 107 ARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNV 166
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG----FEPDSVSLVSA 284
A VF+ M ++V W A+ISG +NG +G L L+EM P+S ++ S
Sbjct: 167 RDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESG 226
Query: 285 LLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
L AC + L G+ +HGY V+ D +V+ +++ MYSKC A ALF ++ +D
Sbjct: 227 LEACGVLDELNSGRCLHGYVVKVGIGDSPMVI-SALFSMYSKCYSTEDACALFLELPEKD 285
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
++SW +I Y G EA+ LF QM+E+ ++PD + +LS L ++G V G+ +
Sbjct: 286 VVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHA 345
Query: 403 LMVSK 407
++ +
Sbjct: 346 VITKR 350
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L ++ YS G P A F D WN +I ++ ALS +M+ +
Sbjct: 47 LAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDFVAALSAHRRMLASG 106
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ--------PTEKHYACMVDLLA 425
+P S F + L+A S E G V Y ++ + + +V + A
Sbjct: 107 ARP--SPFTAPLAA---SASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYA 161
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
R G V +A+K+ + M E + W A++SGC + + G + ++++L D
Sbjct: 162 RCGNVRDAVKVFEEM-PERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGD 213
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 275/489 (56%), Gaps = 10/489 (2%)
Query: 74 PDSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P T +ALK+ L L+ GE++ ++++L + V +S+L+LY KCG ++ A
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M V W+++I + G REAV + G+ D + ++ ACA + D
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +V + + + V V T+ VD+Y K G + A VF M + V WGA++ G
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+A NG L+L + MQ+ G +PD ++ AL AC ++G L LG+ +R D+
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDE 303
Query: 311 ---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N VLGT++IDMY+KCG A +F QM+ +D+I WN +I G+ GH + A +L
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 363
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QM ++ VK + +TF LL + +H+GL+++GR +F M Y I P +HY CMVDLL+RA
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 423
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA ++VD M + ALL GC H+ + E V K+++ L P + G + ++S
Sbjct: 424 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 483
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N ++ +WE+ A +R M+ G++KVP S VE G++H F + DKSH + I L
Sbjct: 484 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 543
Query: 548 KLYLEMRAI 556
+L LEM+ +
Sbjct: 544 ELGLEMKTM 552
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 175/359 (48%), Gaps = 5/359 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY + A+++F+E+P + ++I AY E + + +RPD
Sbjct: 112 LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPD 171
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC + DL GE +WR A + G VFV ++ ++LYVKCG+M +A F+
Sbjct: 172 SFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFD 231
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ KD V W +M+ G NG PREA+D + M+ EG+ D + G + AC LG
Sbjct: 232 KMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDL 291
Query: 196 GL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G ++ L+ V + T+L+DMYAK G A VF+ M + +I+ W A+I G
Sbjct: 292 GRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLG 350
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G L+ +M+ G + + + + L +C G ++ G+ + + + +
Sbjct: 351 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 410
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++D+ S+ G+ A L D M + + ++ IH + E A + Q+I
Sbjct: 411 EHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLI 469
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 297/540 (55%), Gaps = 3/540 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED- 71
+ +I LY ARKLF+ + R V +++++++ Y K EVLGL+ ++ D
Sbjct: 64 INSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDS 123
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
P+ FT+ L C +K G++ ++ G +V ++++++Y +C ++ AM
Sbjct: 124 AYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAM 183
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ + D+ ++S+++ LV +G EA KRM E + D V + ++ CA +
Sbjct: 184 QILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIR 243
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D + GL +H ++ L DV V ++L+D Y K G + A F + N+V W A+++
Sbjct: 244 DLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLT 303
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ QNG TL L +M+ P+ + L ACA + L G +HG V F
Sbjct: 304 AYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKN 363
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L++G ++I+MYSK G + +F M +RD+I+WN +I Y HG G++AL +F M+
Sbjct: 364 HLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMM 423
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
P++ TF +LSA H LV+EG Y+FD ++ K+ ++P +HY CMV LL RAG +
Sbjct: 424 SAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLL 483
Query: 431 EEALKIVDSMS-TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+EA + + + + + W LL+ CH H+ +++G+++ + V++++P D+G + L+SN
Sbjct: 484 DEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNM 543
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
A +KW+ V +RK M++ +KK PG S +++ H F+ E +H + I +++L
Sbjct: 544 HAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQL 603
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 200/385 (51%), Gaps = 13/385 (3%)
Query: 83 LKACVSLMDLKMGEEIWRKAV---ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
LK + L+ G+ I + V + +D+ +S++NLY KCG+ A F++M +
Sbjct: 30 LKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQ 89
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRFGLS 198
+++V WS+++ G + G+ E + ++ + + +E + ++ CAD G + G
Sbjct: 90 RNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQ 149
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
HGY ++ L L V+ +L+ MY++ H+D A + + ++ ++ +++S ++G
Sbjct: 150 CHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGC 209
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
G ++L M DSV+ VS L CAQI L+LG IH ++ F++ + ++
Sbjct: 210 RGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSST 269
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ID Y KCG AR FD ++ R++++W ++ +Y +GH EE L+LF +M +P+
Sbjct: 270 LIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPN 329
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA---CMVDLLARAGEVEEAL 434
TFA LL+A + + G DL+ + + + H ++++ +++G ++ +
Sbjct: 330 EFTFAVLLNACASLVALAYG----DLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSY 385
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
+ +M + W A++ G +H
Sbjct: 386 NVFSNMMNRD-VITWNAMICGYSHH 409
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 192/381 (50%), Gaps = 8/381 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ L + +I +Y + SA ++ + +P V +YNSI+ A E
Sbjct: 154 LLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEA 213
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ +M+ E V DS T+ L C + DL++G +I + ++ G DVFV S++++
Sbjct: 214 AQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDT 273
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG++ A F+ ++ +++V W++++ + NG E ++ + +M+ E +E
Sbjct: 274 YGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTF 333
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+ ACA L +G +HG + + V +L++MY+K+G++D + +VF NM
Sbjct: 334 AVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMN 393
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++TW A+I G++ +GL L + +M S G P+ V+ + L AC + ++ G
Sbjct: 394 RDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYY 453
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR--DLISWNVIIASYGIH 356
+++FD L T ++ + + G+ A D+++W ++ + IH
Sbjct: 454 FDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIH 513
Query: 357 GHGEEALSLFLQMIETMVKPD 377
+L Q+ ET+++ D
Sbjct: 514 ----RNYNLGKQITETVIQMD 530
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 269/443 (60%), Gaps = 2/443 (0%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D F+G ++++Y K G +A F++M +DLV W+S+++GL G ++A+ RM
Sbjct: 172 SDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRM 231
Query: 169 KKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH 227
+ E G +EV ++ ++ ACA +G G S+HG ++ ++ KV SL++MY K G
Sbjct: 232 RTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGF 291
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
LD AS +F+ M ++V+W +++ NG A ++L M+ G PD ++V+ L A
Sbjct: 292 LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA 351
Query: 288 CAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C G + +SIH Y R F+ ++++ T+++++Y+K G + + +F++++ RD I+W
Sbjct: 352 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAW 411
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
++A Y +H G EA+ LF M++ V+ DH TF LLSA SHSGLVEEG+ +F++M
Sbjct: 412 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 471
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
Y+++P HY+CMVDLL R+G +E+A +++ SM EP VW ALL C + +G+
Sbjct: 472 VYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 531
Query: 467 KVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGEL 526
+VA+++L L+P D + ++SN ++ W + VR M++ + + PG S +E ++
Sbjct: 532 EVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKI 591
Query: 527 HAFIMEDKSHNQYEDIVYVLKKL 549
H F++ D+ H + ++I L++L
Sbjct: 592 HRFVVGDQLHPRSDEIHTKLEEL 614
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 188/383 (49%), Gaps = 5/383 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR- 73
R++++Y A++LF+E+P R + ++NS++ S + L + +M E R
Sbjct: 179 RLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQ 238
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T + AC + L G+ + V+LG V +S++N+Y K G ++ A
Sbjct: 239 PNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 298
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE+M + LV W+SM+ NG + +D + MK+ GI+ D+ M+ L++AC D G
Sbjct: 299 FEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLG 358
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R S+H Y R N D+ + T+L+++YAK G L+ + +F+ + + + W A+++G+
Sbjct: 359 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGY 418
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY--TVRRFDFN 311
A + ++L M G E D V+ L AC+ G ++ GK V R +
Sbjct: 419 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 478
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMI 370
L + ++D+ + G A L M W ++ + ++G+ E + Q++
Sbjct: 479 LDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLL 538
Query: 371 ETMVKPDHSTFASLLSALSHSGL 393
++ DH + L + S +GL
Sbjct: 539 -SLDPSDHRNYIMLSNIYSAAGL 560
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K +S V +I +YG + +A +LFEE+P+R + ++NS+++ ++ +
Sbjct: 267 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 326
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ L+N M + + PD +T L+AC + E I G+ D+ + +++LNL
Sbjct: 327 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 386
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G++N + FE+++ +D + W++M+ G + REA+ + M KEG++ D V
Sbjct: 387 YAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 446
Query: 181 MGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
L+ AC+ + G F + Y + L+ + +VD+ ++G L+ A +
Sbjct: 447 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH----YSCMVDLLGRSGRLEDAYELI 502
Query: 236 KNMS-RINIVTWGALI 250
K+M + WGAL+
Sbjct: 503 KSMPMEPSSGVWGALL 518
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 293/538 (54%), Gaps = 1/538 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + AR +F+ + + T+ +++ YS + P L +++M +P+
Sbjct: 189 LIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPN 248
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T ALKA V L +G+ I +V+ Y + VG ++L++Y KCG + +A FE
Sbjct: 249 PFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFE 308
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D++ WS +I+ + Q +A + + RM + + +E + G++QACA++
Sbjct: 309 MIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLEL 368
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+ ++ V +L+DMYAK +++ + +F ++ N V+W +I G+ Q
Sbjct: 369 GEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQ 428
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G A L + EM++ V+ S L ACA +K IH + F+ + ++
Sbjct: 429 SGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIV 488
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+ID Y+KCG A +F+ + D++SWN II++Y +HG AL LF +M ++ +
Sbjct: 489 CNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDI 548
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
K + TF SLLS +GLV +G + F+ M+ ++I+P+ +HY C+V LL RAG + +AL
Sbjct: 549 KANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDAL 608
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K + + + P VW ALLS C HK ++G A+KVL + P D + L+SN +A
Sbjct: 609 KFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAG 668
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+EVA RK+MR G+KK G S VE+ GE+HAF + H I +L+ L L+
Sbjct: 669 ILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLK 726
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 223/441 (50%), Gaps = 3/441 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y + +AR+LF+ +P R ++ +++ Y+ + E L L+ ++ +E +
Sbjct: 88 LLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVN 147
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T LK V++ + I A +LG+ + FVG+++++ Y CG + A F+
Sbjct: 148 HFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFD 207
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD V W++M++ N P A++ + +M+ G + V+ ++A L +
Sbjct: 208 GIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALL 267
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG S++ + + V +L+DMYAK G ++ A +F+ + +++ W LIS +AQ
Sbjct: 268 GKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ 327
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ E+ + M P+ SL L ACA I FL+LG+ IH ++ ++ L +
Sbjct: 328 SCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFV 387
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++DMY+KC + +F +Q + +SWN II Y G E+ALS+F +M +
Sbjct: 388 GNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHM 447
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
TF+S+L A +++ ++ L + K ++D A+ G + +AL
Sbjct: 448 LSTQVTFSSVLRACANTSSIKHAVQIHSL-IEKSTFNNDTIVCNSLIDTYAKCGFIRDAL 506
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
K+ +S+ E + W +++S
Sbjct: 507 KVFESI-VECDVVSWNSIISA 526
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 200/403 (49%), Gaps = 6/403 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVA--LKACVSLMDLKMGEEIWR 100
T++ I SR + E L + + P ++ A L+ C++ D + G +
Sbjct: 10 TFSQINGLLSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHA 69
Query: 101 KAVELG--YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
+ V+ G D F + +LN Y K G + A F+ M ++ V + +++ G G+
Sbjct: 70 RVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEF 129
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
EA++ ++R+++EG + + V+ +++ + +H + + + + V T+L
Sbjct: 130 EEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTAL 189
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+D Y+ G + A VF + + VTW A++S +++N + L +M+ GF+P+
Sbjct: 190 IDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNP 249
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
L SAL A + LGK IHG +V+ +D +G +++DMY+KCG A A+F+
Sbjct: 250 FVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEM 309
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+ D+I W+ +I+ Y E+A +FL+M+ + V P+ + + +L A ++ +E G
Sbjct: 310 IPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG 369
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+L + K + ++D+ A+ +E +L+I S+
Sbjct: 370 EQIHNLAI-KLGYESELFVGNALMDMYAKCRNMENSLEIFSSL 411
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 198/391 (50%), Gaps = 6/391 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y DI A +FE +P V ++ +I Y++ + ++ +M++ V
Sbjct: 288 GALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVV 347
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ + + L+AC ++ L++GE+I A++LGY +++FVG++++++Y KC M ++
Sbjct: 348 PNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEI 407
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F +Q + V W+++I G +G +A+ + M+ + + +V +++ACA+
Sbjct: 408 FSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSI 467
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ + +H + N D V SL+D YAK G + A VF+++ ++V+W ++IS +
Sbjct: 468 KHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAY 527
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFN 311
A +G A + LEL M + + V+ VS L C G + G + + R +
Sbjct: 528 ALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPS 587
Query: 312 LVLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ T ++ + + G + + + D + + W +++S +H + AL +
Sbjct: 588 MEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKN--VALGRYAAEK 645
Query: 371 ETMVKP-DHSTFASLLSALSHSGLVEEGRYW 400
++P D +T+ L + + +G+++E W
Sbjct: 646 VLDIEPHDETTYVLLSNMYAAAGILDEVALW 676
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 301/556 (54%), Gaps = 15/556 (2%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTY--NSIIIAYSRKESPFEVL 61
T A +S+ + LY IV AR++F+ P R D + NS+I AY E
Sbjct: 14 TKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRD-DAFLCNSMIKAYVGMRQYSESF 72
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LY + + PDS TF+V K+C M + G+EI V +G+ D++ ++++++
Sbjct: 73 ALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDM 132
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K GKM+ A F++M + V W+++I G V +G A + +M I+ D
Sbjct: 133 YAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAF 188
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+I A LGD + R V T ++ Y+ G+LD A +F M
Sbjct: 189 NTMIDAYVKLGDMCSARKLFDEMPER----SVVSWTIMIYGYSSNGNLDSARSLFDAMPE 244
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKS 299
N+ +W A+ISG+ QN L+L EMQS EPD V++VS L A A +G L LG
Sbjct: 245 KNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGW 304
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H + R+ D +GT++IDMY+KCG +R +FD M ++ SWN +I ++ I+G
Sbjct: 305 VHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGR 364
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+EAL LF++M P+ T +LSA +HSGLVEEG+ WF M ++ + P +HY
Sbjct: 365 AKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAM-EEFGLTPKIEHYG 423
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL RAG ++EA K+++SM E + + L C K + E+V K+ +K+
Sbjct: 424 CMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAW 483
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + ++ N +A E++W+E V+ MR++G+KK G S +EV+ + F+ D+ H +
Sbjct: 484 NDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPK 543
Query: 539 YEDIVYVLKKLYLEMR 554
+E I VL +L++ M+
Sbjct: 544 WEAIHSVLGQLWVHMK 559
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 296/548 (54%), Gaps = 7/548 (1%)
Query: 12 SVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG +I +Y + AR +F ++ + ++N++I + +G++ ++++
Sbjct: 971 SVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRD 1030
Query: 71 DVRPDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ PD T L+AC SL + +I A++ G D FV ++++++Y K GKM E
Sbjct: 1031 SLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEE 1090
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F DL W+++++G + +G +A+ Y M++ G +D++ ++ +A
Sbjct: 1091 AEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGG 1150
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + G +H ++R NLD+ V + ++DMY K G ++ A VF + + V W +
Sbjct: 1151 LVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTM 1210
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
ISG +NG L +M+ +PD + + + AC+ + L+ G+ IH V+
Sbjct: 1211 ISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNC 1270
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
F+ + TS++DMY+KCG AR LF + +R + SWN +I HG+ +EAL F
Sbjct: 1271 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKY 1330
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M V PD TF +LSA SHSGLV E F M Y I+P +HY+C+VD L+RAG
Sbjct: 1331 MKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAG 1390
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+EEA K++ SM E +++ LL+ C G++VA+K+L L P D + L+SN
Sbjct: 1391 RIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSN 1450
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVY 544
+A +WE VA R MRK +KK PG+S V++ ++H F+ D+SH + Y + Y
Sbjct: 1451 VYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEY 1510
Query: 545 VLKKLYLE 552
++K++ E
Sbjct: 1511 IMKRIREE 1518
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 216/421 (51%), Gaps = 4/421 (0%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V +N + + ++ +E + + MI V D TF V L L L++G++I
Sbjct: 900 VIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHG 959
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+ G V VG+ ++N+YVK G ++ A F +M DL+ W++MI+G +G
Sbjct: 960 IVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEEC 1019
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADL-GDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+V + + ++ + D+ + +++AC+ L G +H +++ + LD V T+L+
Sbjct: 1020 SVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALI 1079
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
D+Y+K G ++ A +F N ++ +W A++ G+ +G L L + MQ G D +
Sbjct: 1080 DVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQI 1139
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+LV+A A + LK GK IH V+R F+ +L + + V+DMY KCG AR +F ++
Sbjct: 1140 TLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
S D ++W +I+ +G E AL + QM + V+PD TFA+L+ A S +E+GR
Sbjct: 1200 PSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGR 1259
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
+V K +VD+ A+ G +E+A + +T +A W A++ G
Sbjct: 1260 QIHANIV-KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRR-IASWNAMIVGLAQ 1317
Query: 459 H 459
H
Sbjct: 1318 H 1318
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 205/450 (45%), Gaps = 44/450 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYS-RKESPFEVLGLYNQMIKEDV 72
+I +Y + SARKLF+ P D T+N+I+ A + + + L+ + + V
Sbjct: 697 LITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVV 756
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
T K C+ E + AV++G DVFV +++N+Y K G + EA V
Sbjct: 757 STTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARV 816
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D+V W+ M+ V EA+ + + G D+V +
Sbjct: 817 LFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL------------ 864
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK-NMSRINIVTWGALIS 251
R L+ VK + +++++ + A+ +F + +++ W +S
Sbjct: 865 -------------RTLSRVVKCKKNILELKQFKAY---ATKLFMYDDDGSDVIVWNKALS 908
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
F Q G A ++ ++M + D ++ V L A + L+LGK IHG +R D
Sbjct: 909 RFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQ 968
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ +G +I+MY K G S AR++F QM DLISWN +I+ + G E ++ +F+ ++
Sbjct: 969 VVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLL 1028
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS----KYKIQPTEKHYACMVDLLAR 426
+ PD T AS+L A S EG Y+ + K + ++D+ ++
Sbjct: 1029 RDSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK 1084
Query: 427 AGEVEEA-LKIVDSMSTEPGLAVWVALLSG 455
G++EEA V+ + LA W A++ G
Sbjct: 1085 RGKMEEAEFLFVNQDGFD--LASWNAIMHG 1112
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 220/505 (43%), Gaps = 70/505 (13%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y I AR LF+ + +R V +N ++ AY +E + L+++ + R
Sbjct: 799 GALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFR 858
Query: 74 PDS---STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
PD T + +K ++++LK + Y +F +Y G
Sbjct: 859 PDDVTLRTLSRVVKCKKNILELKQFK---------AYATKLF-------MYDDDGS---- 898
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
D++ W+ ++ + G+ EAVD + M + D + + ++ A L
Sbjct: 899 ----------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGL 948
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G +HG +R L+ V V L++MY K G + A VF M+ +++++W +I
Sbjct: 949 NCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMI 1008
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVRR-F 308
SG +GL ++ + + + PD ++ S L AC+ + G L IH ++
Sbjct: 1009 SGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGV 1068
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + T++ID+YSK G A LF DL SWN I+ Y + G +AL L++
Sbjct: 1069 VLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYIL 1128
Query: 369 MIETMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
M E+ + D T + A H+ +V+ G + DL V+
Sbjct: 1129 MQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRG-FNLDLFVT----------- 1176
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC-----HNHKKFSIGEKVAKKV 472
+ ++D+ + GE+E A ++ + + P W ++SGC H F+ + ++
Sbjct: 1177 SGVLDMYLKCGEMESARRVFSEIPS-PDDVAWTTMISGCVENGQEEHALFTYHQ---MRL 1232
Query: 473 LKLNPDDLGIHALV---SNFFAMEQ 494
K+ PD+ LV S A+EQ
Sbjct: 1233 SKVQPDEYTFATLVKACSLLTALEQ 1257
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 170/379 (44%), Gaps = 35/379 (9%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM--QRK 140
L+ ++ DL +G+ + + G+ D FV ++++ +Y KCG ++ A F+ +
Sbjct: 663 LRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNR 722
Query: 141 DLVCWSSMINGLVFNG-QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
DLV W+++++ L + + + ++ +++ + + + + C S+
Sbjct: 723 DLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESL 782
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HGY+++ L DV V +LV++YAK G + A +F M+ ++V W ++ + L
Sbjct: 783 HGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLE 842
Query: 260 GSTLELLMEMQSCGFEPDSVSL--VSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS 317
+ L E GF PD V+L +S ++ C + L+L K Y + F
Sbjct: 843 YEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKK-NILEL-KQFKAYATKLF--------- 891
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
MY G D+I WN ++ + G EA+ F+ MI + V D
Sbjct: 892 ---MYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACD 934
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
TF +L+ ++ +E G+ + V + + C++++ +AG V A +
Sbjct: 935 GLTFVVMLTVVAGLNCLELGKQIHGI-VMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993
Query: 438 DSMSTEPGLAVWVALLSGC 456
M+ E L W ++SGC
Sbjct: 994 GQMN-EVDLISWNTMISGC 1011
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 291/560 (51%), Gaps = 25/560 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + S+ +LFE +P R +NS+I AY+ E + L+ +M E V+ D
Sbjct: 303 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 362
Query: 76 SSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + L C L L G+ + ++ G D +G+++L++Y + + F
Sbjct: 363 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 422
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M+ D++ W++MI L N +A + ++RM++ I + ++ ++ AC D+
Sbjct: 423 DRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLD 482
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG S+HGY ++ + ++ ++T+L DMY G A +F+ ++++W A+I
Sbjct: 483 FGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKA- 541
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR---FDFN 311
EP+SV++++ L + + L G+S+H Y RR +
Sbjct: 542 --------------------EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLD 581
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L L + I MY++CG A +F + R++ISWN +IA YG++G G +A+ F QM+E
Sbjct: 582 LSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLE 641
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+P+ TF S+LSA SHSG +E G F MV + + P HY+C+VDLLAR G ++
Sbjct: 642 DGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCID 701
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + +DSM EP +VW ALLS C + + + +K+ KL P + G + L+SN +A
Sbjct: 702 EAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYA 761
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W EV +R +++ G++K PG S + V ++H F D+SH Q + I L L
Sbjct: 762 TAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLS 821
Query: 552 EMRAISSWLQGHMEEHEEHD 571
MR HEE D
Sbjct: 822 SMRETGYDPDLRWVFHEEDD 841
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 216/427 (50%), Gaps = 25/427 (5%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF+ + +R + ++N++I Y F+ L L+ QM+ ++V+ D T VA++AC L
Sbjct: 218 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 277
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
LK+G++I + A++ + D+++ +++LN+Y G + + FE + +D W+SMI+
Sbjct: 278 LKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISA 337
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF-GLSVHGYSIRRHLNL 210
G EA+D + RM+ EG+ DE ++ ++ C +L G S+H + I+ + +
Sbjct: 338 YAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRI 397
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
D + +L+ MY + ++ +F M ++I++W +I A+N L EL M+
Sbjct: 398 DASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMR 457
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
+P+S +++S L AC + L G+SIHGY ++ + N L T++ DMY CG +
Sbjct: 458 ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEA 517
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR LF+ RDLISWN +I +P+ T ++LS+ +
Sbjct: 518 TARDLFEGCPDRDLISWNAMIXK---------------------AEPNSVTIINVLSSFT 556
Query: 390 HSGLVEEGRYWFDLMVSK-YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
H + +G+ + + + + + + AR G ++ A I ++ +
Sbjct: 557 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKR-NIIS 615
Query: 449 WVALLSG 455
W A+++G
Sbjct: 616 WNAMIAG 622
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 210/402 (52%), Gaps = 9/402 (2%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+NS+I + ++ +L Y QM V P+++T + LKAC + ++ G+ I R
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+DV VG+++++ Y KCG + +A F+ M +D+V W++M+ G V G EA+
Sbjct: 88 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQTSLVDMY 222
+ M +E + + M+ L+ AC + R G VHGY +R + + + V T+L+ Y
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 207
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+ + + +F M NIV+W A+ISG+ G LEL ++M + D V+++
Sbjct: 208 LRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 266
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
A+ ACA++G LKLGK IH + +F+F +L + ++++MYS G + LF+ + +
Sbjct: 267 VAVQACAELGSLKLGKQIHQLAI-KFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 325
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH--SGLVEEGR 398
RD WN +I++Y G EEA+ LF++M VK D T +LS SGL++
Sbjct: 326 RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKS 385
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
++ S +I + + ++ + VE KI D M
Sbjct: 386 LHAHVIKSGMRIDASLGN--ALLSMYTELNCVESVQKIFDRM 425
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 185/376 (49%), Gaps = 35/376 (9%)
Query: 7 SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFEVLGLY 64
++ GN+ ++++Y N + S +K+F+ + +GVD ++N++I+A +R + L+
Sbjct: 399 ASLGNA---LLSMYTELNCVESVQKIFDRM--KGVDIISWNTMILALARNTLRAQACELF 453
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC 124
+M + +++P+S T L AC + L G I ++ + + +++ ++Y+ C
Sbjct: 454 ERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNC 513
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
G A FE +DL+ W++MI +P + V ++ ++
Sbjct: 514 GDEATARDLFEGCPDRDLISWNAMIX----KAEP-----------------NSVTIINVL 552
Query: 185 QACADLGDSRFGLSVHGYSIRR--HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
+ L G S+H Y RR L LD+ + + + MYA+ G L A ++FK + + N
Sbjct: 553 SSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRN 612
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
I++W A+I+G+ NG + +M GF P+ V+ VS L AC+ GF+++G +
Sbjct: 613 IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFH 672
Query: 303 YTVRRFDFN--LVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHG 359
V+ F+ LV + ++D+ ++ G AR D M D W +++S +
Sbjct: 673 SMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDA 732
Query: 360 EEALSLF--LQMIETM 373
++A ++F L +E M
Sbjct: 733 KQAKTIFEKLDKLEPM 748
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 14/331 (4%)
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+Q KD W+S+I + + AY +M+ G+ + + +++ACA
Sbjct: 19 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H L DV+V T++VD Y K G ++ A VF MS ++V W A++ G+
Sbjct: 79 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLV 313
G + L+ EM P+S ++V+ LLAC L+LG+ +HGY +R FD N
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ T++I Y + + LFD M R+++SWN +I+ Y G +AL LF+QM+
Sbjct: 199 VATALIGFYLRFDM-RVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 257
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVE 431
VK D T + A + G ++ G+ L + K + E Y ++++ + G +E
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAI---KFEFVEDLYILNALLNMYSNNGSLE 314
Query: 432 EALKIVDSMSTEPGLAVWVALLS-----GCH 457
+ ++ +S+ +W +++S GCH
Sbjct: 315 SSHQLFESVPNRDA-PLWNSMISAYAAFGCH 344
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 304/561 (54%), Gaps = 7/561 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + + A K+F+ +P R V ++++++ + L L+++M ++ + P+
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 477
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ LKAC L L+ G +I +++G+ V VG+S++++Y KCG++NEA F
Sbjct: 478 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 537
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID--ADEVVMMGLIQACADLGDS 193
++ + L+ W++MI G V G +A+D + M++ I DE + L++AC+ G
Sbjct: 538 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597
Query: 194 RFGLSVHGYSIRR--HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HG+ +R H + SLVD+Y K G+L A F + +++W +LI
Sbjct: 598 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 657
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G+AQ G + L +Q + DS +L S + A L+ GK + V+
Sbjct: 658 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 717
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ SV+DMY KCG+ A F +MQ +D+ISW V+I YG HG G++++ +F +M+
Sbjct: 718 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 777
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
++PD + ++LSA SHSG+++EG F ++ + I+P +HYAC+VDLL RAG +
Sbjct: 778 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 837
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++D+M +P + +W LLS C H +G++V K +L+++ + + ++SN +
Sbjct: 838 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 897
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
W E R+ G+KK G S VE+ E+H F + SH I LK+
Sbjct: 898 GQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAE 957
Query: 551 LEMRAISSWLQGHMEEHEEHD 571
+R ++ G +HE HD
Sbjct: 958 RRLREELGYVYGL--KHELHD 976
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 196/385 (50%), Gaps = 9/385 (2%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
++ + ++++Y KC + A F+ M +++V WS++++G V NG + ++ + M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
++GI +E ++AC L GL +HG+ ++ + V+V SLVDMY+K G ++
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE--PDSVSLVSALLA 287
A VF+ + ++++W A+I+GF G L+ MQ + PD +L S L A
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590
Query: 288 CAQIGFLKLGKSIHGYTVR---RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
C+ G + GK IHG+ VR + + S++D+Y KCG AR FDQ++ + +I
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SW+ +I Y G EA+ LF ++ E + D +S++ + L+ +G+ L
Sbjct: 651 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 710
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
V K +VD+ + G V+EA K M + ++ W +++G H
Sbjct: 711 V-KLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKHGLGKK 768
Query: 465 GEKVAKKVLKLN--PDDLGIHALVS 487
++ ++L+ N PD++ A++S
Sbjct: 769 SVRIFYEMLRHNIEPDEVCYLAVLS 793
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 7/286 (2%)
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
L++ L+DMY K +A VF +M N+V+W AL+SG NG +L L EM
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVP 328
G P+ + + L AC + L+ G IHG+ ++ F+ + +G S++DMYSKCG
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK--PDHSTFASLLS 386
+ A +F ++ R LISWN +IA + G+G +AL F M E +K PD T SLL
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589
Query: 387 ALSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
A S +G++ G+ +V S + + +VDL + G + A K D + E
Sbjct: 590 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKT 648
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP--DDLGIHALVSNF 489
+ W +L+ G +F + K++ +LN D + +++ F
Sbjct: 649 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 694
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G ++ LY + SARK F+++ + + +++S+I+ Y+++ E +GL+ ++ + +
Sbjct: 621 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 680
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+ DS + + L+ G+++ AV+L G + V +S++++Y+KCG ++EA
Sbjct: 681 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 740
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +MQ KD++ W+ +I G +G +++V + M + I+ DEV + ++ AC+ G
Sbjct: 741 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 800
Query: 193 SRFG-------LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIV 244
+ G L HG R V+ +VD+ + G L A H+ M + N+
Sbjct: 801 IKEGEELFSKLLETHGIKPR------VEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 854
Query: 245 TWGALIS 251
W L+S
Sbjct: 855 IWQTLLS 861
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 286/516 (55%), Gaps = 9/516 (1%)
Query: 50 AYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD--LKMGEEIWRKAVELGY 107
A+S E L + +M + RPD TF+V L A + + G EI R A G
Sbjct: 3 AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62
Query: 108 GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
+V VG++++++Y KCG++++A AFE++Q K+ V W++M+ +G+ REA++ ++
Sbjct: 63 LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFRE 122
Query: 168 MKKEGIDA--DEVVMMGLIQACADLGDSRFGLSVHGYSIR--RHLNLDVKVQTSLVDMYA 223
M + A D+ I+AC++L D G +H R + L+ DV V T+L++MY+
Sbjct: 123 MCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYS 182
Query: 224 KTGHLDLASHVFKNMSR-INIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSL 281
K G L+ A VF ++ + V W A+I+ +AQ+G L+L M + P +
Sbjct: 183 KCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 242
Query: 282 VSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
V+ + CA++ LK G++IH FD NL++ +++ MY KCG A +F M+
Sbjct: 243 VTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL 302
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+D ISWN II+SY HGH ++AL L+ +M VKP TF LLSA SH GLV +G +
Sbjct: 303 KDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDY 362
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F M ++I+P+ H+ C++DLL R G + EA ++ SM + W++LL C H
Sbjct: 363 FYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 422
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
G + A +V+ P G + L+SN +A +W++V +RK M G+KK PG S +
Sbjct: 423 DLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWI 482
Query: 521 EVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
E+ +H F+ D+SH Q E+I L K+ EM+ +
Sbjct: 483 EIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGL 518
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 10/290 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK--EDVR 73
+I++YG + AR FEEL + T+N+++ Y E L L+ +M + R
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
PD +F++A++AC +L DL+ G EI R+ EL DV VG+++LN+Y KCG + E
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKEL--HKDVVVGTALLNMYSKCGDLEE 189
Query: 130 AMVAFEKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQAC 187
A F+ ++ D VCW++MI +G+ ++A+D Y+ M + + + +I C
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
A+L + G ++H + + ++ V +LV MY K G LD A VF +M + ++W
Sbjct: 250 AELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWN 309
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+IS +A +G + L L EM G +P V+ V L AC+ G + G
Sbjct: 310 TIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG 359
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSV--SLVSALLACAQIGFLKLGKSIHGYT-VR 306
++ F+ NG L M G PD V S++ A +A + G+ IH Y +
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
N+V+GT+VI MY KCG ARA F+++Q ++ ++WN ++ +Y + G EAL LF
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 367 LQMIE--TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-----AC 419
+M E +PD +F+ + A S+ +E+GR +++ + + E H
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEML----RREGKELHKDVVVGTA 176
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++++ ++ G++EEA K+ DS+ + W A+++ H +
Sbjct: 177 LLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGR 218
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 275/489 (56%), Gaps = 10/489 (2%)
Query: 74 PDSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P T +ALK+ L L+ GE++ ++++L + V +S+L+LY KCG ++ A
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M V W+++I + G REAV + G+ D + ++ ACA + D
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +V + + + V V T+ VD+Y K G + A VF M + V WGA++ G
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+A NG L+L + MQ+ G +PD ++ AL AC ++G L LG+ +R D+
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDE 758
Query: 311 ---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N VLGT++IDMY+KCG A +F QM+ +D+I WN +I G+ GH + A +L
Sbjct: 759 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 818
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QM ++ VK + +TF LL + +H+GL+++GR +F M Y I P +HY CMVDLL+RA
Sbjct: 819 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 878
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA ++VD M + ALL GC H+ + E V K+++ L P + G + ++S
Sbjct: 879 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 938
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N ++ +WE+ A +R M+ G++KVP S VE G++H F + DKSH + I L
Sbjct: 939 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 998
Query: 548 KLYLEMRAI 556
+L LEM+ +
Sbjct: 999 ELGLEMKTM 1007
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 184/375 (49%), Gaps = 7/375 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY + A+++F+E+P + ++I AY E + + +RPD
Sbjct: 567 LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPD 626
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC + DL GE +WR A + G VFV ++ ++LYVKCG+M +A F+
Sbjct: 627 SFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFD 686
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ KD V W +M+ G NG PREA+D + M+ EG+ D + G + AC LG
Sbjct: 687 KMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDL 746
Query: 196 GL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G ++ L+ V + T+L+DMYAK G A VF+ M + +I+ W A+I G
Sbjct: 747 GRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLG 805
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G L+ +M+ G + + + + L +C G ++ G+ + + + +
Sbjct: 806 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 865
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ S+ G+ A L D M + + ++ IH + E A + Q+I
Sbjct: 866 EHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLI- 924
Query: 372 TMVKPDHSTFASLLS 386
+++P +S +LS
Sbjct: 925 -LLEPWNSGNYVMLS 938
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 309/562 (54%), Gaps = 44/562 (7%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
+I ARK+FEE+P R + + ++I Y + E L+++ D + + T+T +
Sbjct: 16 EIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRW---DAKKNVVTWTAMVN 72
Query: 85 ACVSLMDLKMGEEI-----------WRKAVELGYGND-----------------VFVGSS 116
+ +K E + W V+ GY + V ++
Sbjct: 73 GYIKFNQVKEAERLFYEMPLRNVVSWNTMVD-GYARNGLTQQALDLFRRMPERNVVSWNT 131
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++ V+CG++ +A F++M+ +D+V W++M+ GL NG+ +A + +M + +
Sbjct: 132 IITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSW 191
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++ G Q + R ++ + +R D+ +++ + + G L+ A +F
Sbjct: 192 NAMITGYAQ------NRRLDEALQLF--QRMPERDMPSWNTMITGFIQNGELNRAEKLFG 243
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLK 295
M N++TW A+++G+ Q+GL+ L + ++M + +P++ + V+ L AC+ + L
Sbjct: 244 EMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLT 303
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIAS 352
G+ IH + F + + +++I+MYSKCG AR +FD + RDLISWN +IA+
Sbjct: 304 EGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAA 363
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y HG+G+EA++LF +M E V + TF LL+A SH+GLVEEG +FD ++ IQ
Sbjct: 364 YAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQL 423
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
E HYAC+VDL RAG ++EA I++ + E L VW ALL+GC+ H IG+ VA+K+
Sbjct: 424 REDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKI 483
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
LK+ P + G ++L+SN +A KW+E A VR M+ G+KK PG S +EV + F++
Sbjct: 484 LKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVG 543
Query: 533 DKSHNQYEDIVYVLKKLYLEMR 554
DK H+QYE + ++L L+ +M+
Sbjct: 544 DKPHSQYEPLGHLLHDLHTKMK 565
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 118/251 (47%), Gaps = 16/251 (6%)
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
+ + G +D A VF+ M +I W +I+G+ + G+ +L +
Sbjct: 7 FISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVT 66
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
++V+ + Q+ + + + +R N+V +++D Y++ G+ A LF +
Sbjct: 67 WTAMVNGYIKFNQVK--EAERLFYEMPLR----NVVSWNTMVDGYARNGLTQQALDLFRR 120
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M R+++SWN II + G E+A LF QM + D ++ ++++ L+ +G VE+
Sbjct: 121 MPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDR----DVVSWTTMVAGLAKNGRVEDA 176
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
R FD M + + + M+ A+ ++EAL++ M E + W +++G
Sbjct: 177 RALFDQMPVRNVVS-----WNAMITGYAQNRRLDEALQLFQRMP-ERDMPSWNTMITGFI 230
Query: 458 NHKKFSIGEKV 468
+ + + EK+
Sbjct: 231 QNGELNRAEKL 241
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 275/489 (56%), Gaps = 10/489 (2%)
Query: 74 PDSSTFTVALKACVSLM-DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P T +ALK+ L L+ GE++ ++++L + V +S+L+LY KCG ++ A
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M V W+++I + G REAV + G+ D + ++ ACA + D
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +V + + + V V T+ VD+Y K G + A VF M + V WGA++ G
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+A NG L+L + MQ+ G +PD ++ AL AC ++G L LG+ +R D+
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDE 782
Query: 311 ---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N VLGT++IDMY+KCG A +F QM+ +D+I WN +I G+ GH + A +L
Sbjct: 783 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 842
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QM ++ VK + +TF LL + +H+GL+++GR +F M Y I P +HY CMVDLL+RA
Sbjct: 843 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 902
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA ++VD M + ALL GC H+ + E V K+++ L P + G + ++S
Sbjct: 903 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 962
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N ++ +WE+ A +R M+ G++KVP S VE G++H F + DKSH + I L
Sbjct: 963 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 1022
Query: 548 KLYLEMRAI 556
+L LEM+ +
Sbjct: 1023 ELGLEMKTM 1031
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 184/375 (49%), Gaps = 7/375 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY + A+++F+E+P + ++I AY E + + +RPD
Sbjct: 591 LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPD 650
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC + DL GE +WR A + G VFV ++ ++LYVKCG+M +A F+
Sbjct: 651 SFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFD 710
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM+ KD V W +M+ G NG PREA+D + M+ EG+ D + G + AC LG
Sbjct: 711 KMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDL 770
Query: 196 GL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G ++ L+ V + T+L+DMYAK G A VF+ M + +I+ W A+I G
Sbjct: 771 GRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLG 829
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G L+ +M+ G + + + + L +C G ++ G+ + + + +
Sbjct: 830 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 889
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
++D+ S+ G+ A L D M + + ++ IH + E A + Q+I
Sbjct: 890 EHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLI- 948
Query: 372 TMVKPDHSTFASLLS 386
+++P +S +LS
Sbjct: 949 -LLEPWNSGNYVMLS 962
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 281/492 (57%), Gaps = 5/492 (1%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
F+++ + + +N++I Y++ E + L+ QM E +P+ +TF LKA ++ D
Sbjct: 204 FDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDS 263
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
+G K ++LG DVFV ++++++Y K + + AF +M +++LV ++++I G
Sbjct: 264 AVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGY 323
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
G+ EA+ Y +++ EG++ D +GL +C+ G VH +S++ L+ DV
Sbjct: 324 SLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDV 383
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
V S+V+ Y+K G D A F++++R N V W +ISGFAQNG L +M+
Sbjct: 384 SVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKF 443
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCA 331
+ D S S + A + ++ G+ +H + ++ D + +G++VIDMYSKCG+ A
Sbjct: 444 IDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDA 503
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
+ +F M ++++SWN +I Y +G +EAL LF +M + + P TF +L A SH+
Sbjct: 504 QKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHA 563
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE--EALKIVDSMSTEPGLAVW 449
GLVEEGR +++LMV Y I P+ +H CMVDLL RAG +E EA + S S EPG +W
Sbjct: 564 GLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPG--IW 621
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
+LLS C HK +G + A+ L L P + +SN +A ++ W EV+ +R M+
Sbjct: 622 GSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDM 681
Query: 510 GMKKVPGYSVVE 521
G++K PG S +E
Sbjct: 682 GVEKEPGCSWIE 693
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 249/445 (55%), Gaps = 7/445 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK--EDVR 73
+I++Y + I AR LF+++P R ++NS+I YS++ E GL+ MI E+ +
Sbjct: 82 LISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWK 141
Query: 74 PDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
S FT+A LKAC L ++G+ + AV++G+ +D+FV S + +Y KCG ++ A
Sbjct: 142 LLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAG 201
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+AF++++ KD+V W++MI G N EA++ + +M+ EG ++ +++A +
Sbjct: 202 LAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMS 261
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
DS G H ++ ++DV V T+LVDMY+K ++ F MS+ N+V++ ALI+
Sbjct: 262 DSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALIT 321
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G++ G L + ++QS G EPDS + V +C+ + G +H ++V+ D
Sbjct: 322 GYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDS 381
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +G S+++ YSKCG A F+ + + + W II+ + +G GE+AL F +M
Sbjct: 382 DVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMR 441
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ + K D + +S++ A+S VE+GR+ V K + T + ++D+ ++ G V
Sbjct: 442 KFIDKTDEFSSSSVIKAVSSWAAVEQGRH-LHAHVMKSGLDCTIYVGSAVIDMYSKCGMV 500
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E+A K+ M E + W ++++G
Sbjct: 501 EDAQKVFSVM-PEKNVVSWNSMITG 524
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 233/495 (47%), Gaps = 32/495 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+ S I +R+ + L + QM++ + P++ T++ + AC + + +
Sbjct: 9 WTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLIL 68
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ G+ N +FV S ++++Y K ++ EA F+ M +D V W+SMI G G EA
Sbjct: 69 KKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACG 128
Query: 164 AYKRM----KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+ M + + + + +++AC LG SR G VHGY+++ + D+ V S V
Sbjct: 129 LFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTV 188
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
MY K G LD+A F + +IV W +I+G+AQN +EL +M+ GF+P+
Sbjct: 189 YMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDT 248
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC-GVPSCARALFDQ 337
+ L A + +G+ H ++ ++ + T+++DMYSK + RA F +
Sbjct: 249 TFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERA-FGE 307
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M R+L+S+N +I Y + G EEAL ++ Q+ ++PD TF L S+ S S V EG
Sbjct: 308 MSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEG 367
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ K+ + +V+ ++ G + AL+ +S++ P W ++SG
Sbjct: 368 AQ-VHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCWAGIISGFA 425
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
+ + GEK + K+ K +E + S +K V +
Sbjct: 426 QNGE---GEKALMQFCKMRK--------------FIDKTDEFS------SSSVIKAVSSW 462
Query: 518 SVVEVNGELHAFIME 532
+ VE LHA +M+
Sbjct: 463 AAVEQGRHLHAHVMK 477
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 183/348 (52%), Gaps = 3/348 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y DI + F E+ R + ++N++I YS E L +Y+Q+ E + PD
Sbjct: 288 LVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPD 347
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF +C + G ++ +V+ G +DV VG+S++N Y KCG + A+ AFE
Sbjct: 348 SFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFE 407
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ R + VCW+ +I+G NG+ +A+ + +M+K DE +I+A +
Sbjct: 408 SINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQ 467
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H + ++ L+ + V ++++DMY+K G ++ A VF M N+V+W ++I+G+AQ
Sbjct: 468 GRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQ 527
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLV 313
NG L L EM S G P +V+ V L AC+ G ++ G++ + V + ++
Sbjct: 528 NGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSME 587
Query: 314 LGTSVIDMYSKCGVPSCARA-LFDQMQSRDLISWNVIIASYGIHGHGE 360
T ++D+ + G A A L S++ W ++++ G+H + +
Sbjct: 588 HCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSD 635
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 39/394 (9%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
M ++V W+S I G +A+ + +M + GI+ + + I ACA
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
S+H +++ + + V + L+ MY+K + A +F +M + V+W ++I+G++Q
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 257 GLAGSTLELLMEM-QSC---GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
GL L M SC +L + L AC +G ++GK +HGY V+ FD +
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L + S + MY KCG+ A FDQ++++D+++WN +I Y + + EEA+ LF QM
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYW----------FDLMVSK---------YKIQP 412
KP+ +TF +L A + GR + D+ V+ Y I+
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300
Query: 413 TEKHYA-----------CMVDLLARAGEVEEALKIVDSMST---EPGLAVWVALLSGCHN 458
E+ + ++ + G+ EEAL++ + + EP +V L S C
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360
Query: 459 HKKFSIGEKVAKKVLKLNPD-DLGIHALVSNFFA 491
+ G +V +K D D+ + + NF++
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYS 394
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 295/545 (54%), Gaps = 4/545 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A ++F+ + +R T+N++I Y++ L + M E V D
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEID 200
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF L K+ ++ K V+ G +D V ++++ Y +CG + +A F+
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260
Query: 136 -KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ +DLV W+SM+ + N Q EA + M+ G + D +I A +
Sbjct: 261 GAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQG 320
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT--GHLDLASHVFKNMSRINIVTWGALISG 252
G S+HG I+R L V + SL+ MY K+ +D A ++F+++ + V+W ++++G
Sbjct: 321 QGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTG 380
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
F+Q+GL+ L+ M+S D + + L +C+ + L+LG+ +H ++ F+ N
Sbjct: 381 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN 440
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +S+I MYSKCGV AR FD I+WN +I Y HG G+ AL LF M +
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VK DH TF ++L+A SH GLVEEG + M S Y I P +HYACM+DLL RAG ++
Sbjct: 501 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLD 560
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA ++++M EP VW LL C + +VA +L+L P++ + L+S+ F
Sbjct: 561 EAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 620
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
++W E A +++ M++ G+KKVPG+S +EV E+ +F ED+SH E+I L +L
Sbjct: 621 HLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELME 680
Query: 552 EMRAI 556
E+R +
Sbjct: 681 EIRRL 685
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 6/468 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK+ +A + II+ Y +I A K+F E R ++N++I + + L
Sbjct: 26 IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
M + D +F LK + +++G+++ V++GY +VF GS++L++Y
Sbjct: 86 EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC ++ +A F+ + ++ V W+++I+G G A M+ EG++ D+
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN-MSR 240
L+ D + VH ++ L D V +++ Y++ G ++ A VF +
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++VTW ++++ + N +L +EMQ GFEPD + S + A + GKS+
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSL 325
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL--FDQMQSRDLISWNVIIASYGIHG 357
HG ++R +F + + S+I MY K S AL F+ ++++D +SWN I+ + G
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
E+AL F M V DH F+++L + S ++ G+ ++V K +P
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ-VHVLVLKSGFEPNGFVA 444
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+ ++ + ++ G +E+A K D+ + +A W +L+ G H + I
Sbjct: 445 SSLIFMYSKCGVIEDARKSFDATPKDSSIA-WNSLIFGYAQHGRGKIA 491
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 185/361 (51%), Gaps = 12/361 (3%)
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
A++ G ++ +++++ Y KCG++ A F + ++D V W++MI G V G A
Sbjct: 25 AIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETA 84
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
++ K MK+ G D +++ A +G G VH ++ +V ++L+DM
Sbjct: 85 LEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDM 144
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
YAK ++ A VFK+++ N VTW ALISG+AQ G G+ LL M+ G E D +
Sbjct: 145 YAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTF 204
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD-QMQ 339
L KL +H V+ + + ++I YS+CG A +FD ++
Sbjct: 205 APLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIE 264
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL---SHSGLVEE 396
+RDL++WN ++A+Y ++ EEA LFL+M +PD T+ S++SA SH G +
Sbjct: 265 TRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQG---Q 321
Query: 397 GRYWFDLMVSK--YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G+ L++ + + P M L + + ++EAL I +S+ + ++ W ++L+
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMY-LKSHSKSMDEALNIFESLENKDHVS-WNSILT 379
Query: 455 G 455
G
Sbjct: 380 G 380
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 26/305 (8%)
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H +I+ + +++ YAK G + +AS +F S+ + V+W +I+GF G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
+ LE L M+ GF D S S L A +G++++G+ +H V+ ++ N+ G+++
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+DMY+KC A +F + R+ ++WN +I+ Y G A L M V+ D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 379 STFASL-----------LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
TFA L L+ H+ +V+ G + S + ++ +
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHG------LASDTTVCNA------IITAYSEC 249
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSG--CHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
G +E+A ++ D L W ++L+ +N ++ + + +VL PD ++
Sbjct: 250 GSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSV 309
Query: 486 VSNFF 490
+S F
Sbjct: 310 ISAAF 314
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ G +I +Y I ARK F+ P +NS+I Y++
Sbjct: 432 VLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIA 491
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
L L+ M V+ D TF L AC + + EE W K++E YG + +
Sbjct: 492 LDLFFLMKDRRVKLDHITFVAVLTAC---SHIGLVEEGWSFLKSMESDYGIPPRMEHYAC 548
Query: 117 MLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMI 149
M++L + G+++EA E M D + W +++
Sbjct: 549 MIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 582
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 292/544 (53%), Gaps = 7/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + + AR LF+E+ LR V +YN ++ Y EV+ L+ M+ +P+
Sbjct: 61 LINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPN 120
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
FT L AC + G + + G FV SS++++Y KC ++ A+ E
Sbjct: 121 EYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLE 180
Query: 136 KMQ-----RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
D C++S++N LV +G+ EAV+ RM EG+ D V + ++ C +
Sbjct: 181 SEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQI 240
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D GL VH ++ L DV V + LVDM+ K G + A VF + N+V W +L+
Sbjct: 241 RDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLM 300
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
+ + QNG TL LL M G + + L A A + L+ G +H +
Sbjct: 301 TAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIK 360
Query: 311 N-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N +++G ++I+MYSKCG + +F M++RD+I+WN +I Y HG G++AL LF M
Sbjct: 361 NRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDM 420
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ P+H TF +LSA +H LV EG Y+ + ++ +K++P +HY C+V +L RAG
Sbjct: 421 LSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGM 480
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+EEA + + + + W LL+ C+ H+ +++G K+A+ +L+++P D+G + L+SN
Sbjct: 481 LEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNM 540
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A + W+ V +RK MR+ +KK PG S +E+ +H F + +H + I Y +L
Sbjct: 541 YAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQI-YNKVQL 599
Query: 550 YLEM 553
LEM
Sbjct: 600 LLEM 603
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 178/354 (50%), Gaps = 14/354 (3%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+S++NLYVKC K+ A F++M + +V ++ ++ G + +G+ E V +K M
Sbjct: 59 NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+E V ++ ACA G G+ HG+ + L V++SLV MY+K H+DLA V
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178
Query: 235 FK----NMSRIN-IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+ N+ N + ++++ ++G G +E+L M G DSV+ VS + C
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238
Query: 290 QIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
QI L LG +H ++ F++ +G+ ++DM+ KCG AR +FD +Q+R+++ W
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM---V 405
++ +Y +G EE L+L M + TFA LL+A + + G DL+ V
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG----DLLHARV 354
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
K I+ ++++ ++ G ++ + + M + W A++ G H
Sbjct: 355 EKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRD-IITWNAMICGYSQH 407
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 294 LKLGKSIHGYTVRR---------FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
L GKSIH + R +FN++ S+I++Y KC AR LFD+M R ++
Sbjct: 28 LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
S+NV++ Y G E + LF M+ ++ +P+ F ++LSA +HSG V EG +
Sbjct: 88 SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFL 147
Query: 405 VSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDS 439
+K H+ + +V + ++ V+ AL++++S
Sbjct: 148 ---FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLES 181
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 287/542 (52%), Gaps = 1/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +F+ + + ++++I ++ E + L++ M D P+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L A + +L+ G+ I + G+ DV V ++++ +Y+K G +++ +E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +DL+ W++ ++GL G + + M +EG + + ++ +C+ L D +
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L+ + V T+L+DMYAK +L+ A F +S ++ TW +I+ +AQ
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVL 314
L +MQ G +P+ +L L C+ + L+ G+ +H + ++ +
Sbjct: 595 TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFV 654
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY+KCG A ALF+ + RD I+WN II Y +G G +AL+ F M++ +
Sbjct: 655 GSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGI 714
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LSA SH GLVEEG+ F+ M + I PT H ACMVD+L R G+ +E
Sbjct: 715 SPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELE 774
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M +W +L H +GEK A K+ +L P++ + L+SN FA E
Sbjct: 775 DFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEG 834
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++V VR M G+KK PG S VE NG++H F+ D SH Q ++I L +L E+
Sbjct: 835 RWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELA 894
Query: 555 AI 556
+I
Sbjct: 895 SI 896
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 230/441 (52%), Gaps = 3/441 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY +I A K+F +P + T+N ++ Y+++ VL L+ M++ DV+ +
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCN 313
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T LK C + +LK G+ I ++ GY + F+G ++++Y KCG +A+ F+
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFK 373
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ D+V WS++I L GQ E++ + M+ ++ + L+ A + G+ ++
Sbjct: 374 TIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY 433
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H + DV V +LV MY K G + + ++++M ++++W A +SG
Sbjct: 434 GQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHD 493
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G+ L + M GF P+ + +S L +C+ + + G+ +H + ++ + D N +
Sbjct: 494 CGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFV 553
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T++IDMY+KC A F+++ RDL +W VII +Y GE+AL+ F QM + V
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ T A LS S +E G+ ++ + A +VD+ A+ G +EEA
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSA-LVDMYAKCGCMEEAE 672
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
+ +++ +A W ++ G
Sbjct: 673 ALFEALIRRDTIA-WNTIICG 692
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 193/381 (50%), Gaps = 3/381 (0%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
++ L+ C S L + + I V+ D + S++N+Y KC A + KM
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D+V W+++I GLV G +++ ++ M+ EGI +E + ++AC+ G
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H + + L LD+ V ++LVD+YAK G ++LAS +F M N VTW L++G+AQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
L+L M + + +L + L CA LK G+ IH ++ ++ N +G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMYSKCG+ A +F ++ D++ W+ +I G EE++ LF M P+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T SLLSA +++G ++ G+ V KY + +V + + G V + K+
Sbjct: 415 QYTICSLLSAATNTGNLQYGQS-IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 438 DSMSTEPGLAVWVALLSGCHN 458
+SM + L W A LSG H+
Sbjct: 474 ESM-VDRDLISWNAYLSGLHD 493
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 222/444 (50%), Gaps = 14/444 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR + ++P R V ++ ++I + + + L+ +M E + P+ T LKAC
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
M L +G+++ +A +LG D+FVGS++++LY KCG++ A F M ++ V W+ +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+NG G + + M + + +E + +++ CA+ + + G +H I+
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + LVDMY+K G A VFK + + +IV W ALI+ Q G + +++L
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ P+ ++ S L A G L+ G+SIH + F+ ++ + +++ MY K G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHG--EEALSLFLQMIETMVKPDHSTFASLL 385
L++ M RDLISWN ++ G+H G + L++F M+E P+ TF S+L
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL 523
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTE 443
+ S V GR + K Q + ++ C ++D+ A+ +E+A + +S
Sbjct: 524 GSCSCLFDVHYGR---QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580
Query: 444 PGLAVWVALLSGCHNHKKFSIGEK 467
L W +++ N+ + + GEK
Sbjct: 581 D-LFTWTVIIT---NYAQTNQGEK 600
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L +I +Y + A F L +R + T+ II Y++ +
Sbjct: 542 IIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKA 601
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + QM +E V+P+ T L C SL L+ G+++ + G+ +D+FVGS+++++
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDM 661
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M EA FE + R+D + W+++I G NGQ +A+ A++ M EGI D V
Sbjct: 662 YAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTF 721
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLD-LASHVFKN 237
G++ AC+ G G H S+ R + V +VD+ + G D L + K
Sbjct: 722 TGILSACSHQGLVEEG-KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKM 780
Query: 238 MSRINIVTWGALI 250
N + W ++
Sbjct: 781 QLSQNALIWETVL 793
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 289/515 (56%), Gaps = 13/515 (2%)
Query: 12 SVGRII-ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY-NQMIK 69
+ GR + L + + A LFE L N+I+ Y P+ LG Y QM++
Sbjct: 93 AAGRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVR 152
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ V P+ TF + +K C + + GE+I + ++ G+ D+FV +S++++Y CG++ +
Sbjct: 153 KCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGD 212
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A FE DLV W+SMI+G V NG+ A + ++ M + + + ++ G +
Sbjct: 213 ARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGN--- 269
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
GD + R D+ ++D YA+ ++++A +F M N+V+W +
Sbjct: 270 -GDMTAAEDLFNKMPFR----DIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIM 324
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY--TVRR 307
++ + + L + +M P+ +LVS L ACA +G L GK IH Y R
Sbjct: 325 LALYVRIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRV 383
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ +++L T+++ MY+KCG AR +FD+M +R ++SWN +I YG+HG ++AL +FL
Sbjct: 384 IEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFL 443
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M + P+ +TF +LSA +HSG++ EG ++FDLM YKI+P +HY CMVDLL RA
Sbjct: 444 DMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRA 503
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G +++ +++ M E G A+W ALLS C H + E VAK++++L P D+G + L+S
Sbjct: 504 GLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLS 563
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
N +A E KW++V VRK M++ G+ K G+S V +
Sbjct: 564 NIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHI 598
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 297/579 (51%), Gaps = 37/579 (6%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +++ Y + A L E L ++N +I +Y + + + Y QM+ + V
Sbjct: 117 VSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGV 176
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD+ TF LKAC +LK G E+ + +FV ++++++Y +CG+++ A
Sbjct: 177 RPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARN 236
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--------------------- 171
F+ M +D V W+SMI+ G REA + ++ M+ +
Sbjct: 237 LFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGN 296
Query: 172 --------------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
GI D+V M+ + AC+ +G R G +HG++IR + ++ VQ +
Sbjct: 297 FTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNA 356
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
LV MYA+ + A +F+ + +TW +++SG G L L E+ G EPD
Sbjct: 357 LVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPD 416
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALF 335
V+ S L CA++ L+ G+ H Y + DF +L+L +++DMY++ G S A+ +F
Sbjct: 417 YVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIF 476
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+ +D +++ +IA YG+ G G +A+ LF +M +KPDH T ++LSA SHSGLV
Sbjct: 477 YSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVN 536
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ F M S + + P +HYACM DL R G + +A +I+ M P A+W L+
Sbjct: 537 QAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGA 596
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H IGE A+K+L++ P+ G + L++N +A W ++A +R MR SG+ K+P
Sbjct: 597 CCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIP 656
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G S V+V E +F + D S Q + +L LY M+
Sbjct: 657 GCSWVDVGSEFISFSVGDTSSPQALESKLLLDSLYDVMK 695
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 196/415 (47%), Gaps = 39/415 (9%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
+ ++ L +C L G+++ + G D F+ S ++ Y + EA E
Sbjct: 81 SISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETS 140
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
W+ +I V + A+ AYK+M +G+ D +++AC + + +FGL
Sbjct: 141 NLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGL 200
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM----------------SR- 240
VH + V +L+ MY + G +D A ++F NM SR
Sbjct: 201 EVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRG 260
Query: 241 ------------------INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
IN+VTW + G + G L+LL +M++ G D V+++
Sbjct: 261 MWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMI 320
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSR 341
L AC+ IG ++LGK IHG+T+R + L + +++ MY++C A LF +
Sbjct: 321 IGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDK 380
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
I+WN +++ G EEAL LF +++ V+PD+ TFAS+L + ++ GR F
Sbjct: 381 SRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGRE-F 439
Query: 402 DLMVSKYK-IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++K++ + + +VD+ ARAG+V EA +I S+S + + + +L++G
Sbjct: 440 HCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEV-TYTSLIAG 493
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 155 NGQPREAVDAYK--RMKKEGIDADEVVMMG---LIQACADLGDSRFGLSVHGYSIRRHLN 209
+GQ ++ +A+ +++ D+ ++++ L+ +C G +HG+ I L
Sbjct: 52 HGQLSKSFEAFSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLV 111
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
D + + LV Y+ L A + + + +W LI+ + ++ L + + +M
Sbjct: 112 EDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQM 171
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLG----KSIHGYTVRRFDFNLVLGTSVIDMYSKC 325
S G PD+ + S L AC + LK G KSI+ ++ ++L + ++I MY +C
Sbjct: 172 VSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWST---PWSLFVHNALISMYGRC 228
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
G AR LFD M RD +SWN +I+ Y G EA LF M
Sbjct: 229 GEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESM 272
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 287/542 (52%), Gaps = 1/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +F+ + + ++++I ++ E + L++ M D P+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L A + +L+ G+ I + G+ DV V ++++ +Y+K G +++ +E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +DL+ W++ ++GL G + + M +EG + + ++ +C+ L D +
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L+ + V T+L+DMYAK +L+ A F +S ++ TW +I+ +AQ
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVL 314
L +MQ G +P+ +L L C+ + L+ G+ +H + ++ +
Sbjct: 595 TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFV 654
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY+KCG A ALF+ + RD I+WN II Y +G G +AL+ F M++ +
Sbjct: 655 GSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGI 714
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LSA SH GLVEEG+ F+ M + I PT H ACMVD+L R G+ +E
Sbjct: 715 SPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELE 774
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ M +W +L H +GEK A K+ +L P++ + L+SN FA E
Sbjct: 775 DFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEG 834
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W++V VR M G+KK PG S VE NG++H F+ D SH Q ++I L +L E+
Sbjct: 835 RWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELA 894
Query: 555 AI 556
+I
Sbjct: 895 SI 896
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 230/441 (52%), Gaps = 3/441 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY +I A K+F +P + T+N ++ Y+++ VL L+ M++ DV+ +
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCN 313
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T LK C + +LK G+ I ++ GY + F+G ++++Y KCG +A+ F+
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFK 373
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ D+V WS++I L GQ E++ + M+ ++ + L+ A + G+ ++
Sbjct: 374 TIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY 433
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G S+H + DV V +LV MY K G + + ++++M ++++W A +SG
Sbjct: 434 GQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHD 493
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G+ L + M GF P+ + +S L +C+ + + G+ +H + ++ + D N +
Sbjct: 494 CGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFV 553
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T++IDMY+KC A F+++ RDL +W VII +Y GE+AL+ F QM + V
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ T A LS S +E G+ ++ + A +VD+ A+ G +EEA
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSA-LVDMYAKCGCMEEAE 672
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
+ +++ +A W ++ G
Sbjct: 673 ALFEALIRRDTIA-WNTIICG 692
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 193/381 (50%), Gaps = 3/381 (0%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
++ L+ C S L + + I V+ D + S++N+Y KC A + KM
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D+V W+++I GLV G +++ ++ M+ EGI +E + ++AC+ G
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H + + L LD+ V ++LVD+YAK G ++LAS +F M N VTW L++G+AQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
L+L M + + +L + L CA LK G+ IH ++ ++ N +G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMYSKCG+ A +F ++ D++ W+ +I G EE++ LF M P+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T SLLSA +++G ++ G+ V KY + +V + + G V + K+
Sbjct: 415 QYTICSLLSAATNTGNLQYGQS-IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 438 DSMSTEPGLAVWVALLSGCHN 458
+SM + L W A LSG H+
Sbjct: 474 ESM-VDRDLISWNAYLSGLHD 493
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 222/444 (50%), Gaps = 14/444 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR + ++P R V ++ ++I + + + L+ +M E + P+ T LKAC
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
M L +G+++ +A +LG D+FVGS++++LY KCG++ A F M ++ V W+ +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+NG G + + M + + +E + +++ CA+ + + G +H I+
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + LVDMY+K G A VFK + + +IV W ALI+ Q G + +++L
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ P+ ++ S L A G L+ G+SIH + F+ ++ + +++ MY K G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHG--EEALSLFLQMIETMVKPDHSTFASLL 385
L++ M RDLISWN ++ G+H G + L++F M+E P+ TF S+L
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL 523
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTE 443
+ S V GR + K Q + ++ C ++D+ A+ +E+A + +S
Sbjct: 524 GSCSCLFDVHYGR---QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580
Query: 444 PGLAVWVALLSGCHNHKKFSIGEK 467
L W +++ N+ + + GEK
Sbjct: 581 D-LFTWTVIIT---NYAQTNQGEK 600
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L +I +Y + A F L +R + T+ II Y++ +
Sbjct: 542 IIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKA 601
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + QM +E V+P+ T L C SL L+ G+++ + G+ +D+FVGS+++++
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDM 661
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG M EA FE + R+D + W+++I G NGQ +A+ A++ M EGI D V
Sbjct: 662 YAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTF 721
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLD-LASHVFKN 237
G++ AC+ G G H S+ R + V +VD+ + G D L + K
Sbjct: 722 TGILSACSHQGLVEEG-KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKM 780
Query: 238 MSRINIVTWGALI 250
N + W ++
Sbjct: 781 QLSQNALIWETVL 793
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 285/521 (54%), Gaps = 10/521 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++N++I + E L+ +M P+ T KA L+D+ MG+E+ A
Sbjct: 235 SWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA 294
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC-----WSSMINGLVFNGQ 157
ELG +V VG++++++Y KCG +++A F+ + C W++MI+G +G
Sbjct: 295 SELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT---NFINCGVNTPWNAMISGYSQSGC 351
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-DVKVQT 216
+EA++ Y +M + GI +D + A A +FG VHG ++ L+L V V
Sbjct: 352 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 411
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
++ D Y+K G L+ VF M +IV+W L++ ++Q+ L L M+ GF P
Sbjct: 412 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 471
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
+ + S L++CA + FL+ G+ +HG + D + +++IDMY+KCG + A +F
Sbjct: 472 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 531
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D++ + D++SW II+ Y HG E+AL LF +M + +K + T +L A SH G+VE
Sbjct: 532 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 591
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG ++F M Y + P +HYAC++DLL R G +++A++ + M EP VW LL G
Sbjct: 592 EGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 651
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H +GE A+K+L + P+ + L+SN + +E+ +R M+ G+KK P
Sbjct: 652 CRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 711
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
GYS + V G +H F D+ H Q ++I L++L +++A+
Sbjct: 712 GYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 752
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 229/445 (51%), Gaps = 6/445 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y ++ +A +F+E+P R V ++ +I+ + F+ + +M+ + PD
Sbjct: 110 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 169
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
++ +++C+ L L++G+ + + V G+ +FV +S+LN+Y K G + ++ F M
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ V W++MI+G NG EA D + RMK + ++ + +A L D G
Sbjct: 230 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 289
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSRINIVT-WGALISGFAQN 256
V + + +V V T+L+DMY+K G L A VF N + T W A+ISG++Q+
Sbjct: 290 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 349
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV-L 314
G + LEL ++M G D + S A A L+ G+ +HG ++ D +V +
Sbjct: 350 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 409
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++ D YSKCG R +FD+M+ RD++SW ++ +Y GEEAL+ F M E
Sbjct: 410 NNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGF 469
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ TF+S+L + + +E GR L+ K + + + ++D+ A+ G + EA
Sbjct: 470 APNQFTFSSVLISCASLCFLEYGRQVHGLLC-KAGLDTEKCIESALIDMYAKCGSITEAG 528
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K+ D +S P + W A++SG H
Sbjct: 529 KVFDKISN-PDIVSWTAIISGYAQH 552
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 23/360 (6%)
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KC + A F++M ++++ W+ MI G +G + + M GI D+
Sbjct: 109 HVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKF 168
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+IQ+C L G VH + R + V TSL++MYAK G ++ + VF M
Sbjct: 169 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 228
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ N V+W A+ISG NGL +L + M++ P+ +LVS A ++ + +GK
Sbjct: 229 TEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 288
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGI 355
+ + N+++GT++IDMYSKCG AR++FD + WN +I+ Y
Sbjct: 289 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY--------WFDLMVSK 407
G +EAL L++QM + + D T+ S+ +A++ S ++ GR DLMV
Sbjct: 349 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 408
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ D ++ G +E+ K+ D M E + W L++ + + S+GE+
Sbjct: 409 VN--------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA---YSQSSLGEE 456
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 5/280 (1%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQ-TSLVDMYAKTGHLDLASHVFKN 237
++ +++ CA+ G R +VHG ++ + + D+ V +Y+K A VF
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M + N+ +W +I G ++GL + EM + G PD + + + +C + L+LG
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H V R F ++ + TS+++MY+K G + +F+ M + +SWN +I+ +
Sbjct: 187 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G EA LF++M P+ T S+ A+ V G+ + S+ I+
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNC-ASELGIEGNVLV 305
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAV-WVALLSG 455
++D+ ++ G + +A + D+ G+ W A++SG
Sbjct: 306 GTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG 345
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFN----LVLGTSVIDMYSKCGVPSCARALFD 336
L+ L CA+ G ++ K++HG ++ +F +VL +YSKC A +FD
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKS-NFEDKDLMVLFNHAAHVYSKCSEFRAACGVFD 125
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+M R++ SW V+I HG + F +M+ + + PD +++++ + +E
Sbjct: 126 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 185
Query: 397 GRYWFDLMVSKYKIQPTEKHY---ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
G+ ++ ++ ++ H ++++ A+ G +E++ + + M TE W A++
Sbjct: 186 GK----MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN-MMTEHNQVSWNAMI 240
Query: 454 SGCHNH 459
SGC ++
Sbjct: 241 SGCTSN 246
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 261/453 (57%), Gaps = 33/453 (7%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + ++ W+S+I L +G EA+ A+ M+K + + I++C+ L D G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF--- 253
H ++ D+ V ++LVDMY+K G L A +F +S NIV+W ++I+G+
Sbjct: 96 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155
Query: 254 ----------------------------AQNGLAGSTLELLMEMQSCG-FEPDSVSLVSA 284
AQNG++ ++E+ M G ++V+L +
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 285 LLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
LLACA G +LGK IH ++ + N+ +GTS+IDMY KCG AR FD+M+ +++
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNV 275
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
SW+ ++A YG+HGH +EAL +F +M VKP++ TF S+L+A SH+GL+EEG +WF
Sbjct: 276 KSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA 335
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
M ++ ++P +HY CMVDLL RAG ++EA ++ M P VW ALL C HK
Sbjct: 336 MSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVD 395
Query: 464 IGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+GE A+K+ +L+P + G + L+SN +A +WE+V +R M+ SG+ K PG+S+V++
Sbjct: 396 LGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIK 455
Query: 524 GELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
G +H F++ D+ H Q+E I L+KL ++++ +
Sbjct: 456 GRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEV 488
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 181/353 (51%), Gaps = 39/353 (11%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K ++P+ STF A+K+C +L+DL G + +
Sbjct: 41 VFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQ 100
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV------- 153
+A+ G+ D+FV S+++++Y KCG++ +A F+++ +++V W+SMI G V
Sbjct: 101 QALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHR 160
Query: 154 ------------------------FNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACA 188
NG E+++ + RM K+G I+ + V + ++ ACA
Sbjct: 161 ALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACA 220
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
G R G +H I+ L +V V TS++DMY K G +++A F M N+ +W A
Sbjct: 221 HSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 280
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+++G+ +G A LE+ EM G +P+ ++ VS L AC+ G L+ G H +
Sbjct: 281 MVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG--WHWFKAMSH 338
Query: 309 DFNLVLGTS----VIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIH 356
+F++ G ++D+ + G A L M+ R D + W ++ + +H
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 391
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 134/243 (55%), Gaps = 13/243 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
+I Y +D A ++F+ + R V ++NSII Y++ E + ++++M+K+ ++
Sbjct: 148 MITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 207
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
++ T + L AC ++G+ I + +++G ++VFVG+S++++Y KCGK+ A AF
Sbjct: 208 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 267
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M+ K++ WS+M+ G +G +EA++ + M G+ + + + ++ AC S
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC-----SH 322
Query: 195 FGLSVHGYSIRRHLNLDVKVQT------SLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
GL G+ + ++ + V+ +VD+ + G+L A + K M R + V WG
Sbjct: 323 AGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWG 382
Query: 248 ALI 250
AL+
Sbjct: 383 ALL 385
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 285/521 (54%), Gaps = 10/521 (1%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++N++I + E L+ +M P+ T KA L+D+ MG+E+ A
Sbjct: 289 SWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA 348
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC-----WSSMINGLVFNGQ 157
ELG +V VG++++++Y KCG +++A F+ + C W++MI+G +G
Sbjct: 349 SELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT---NFINCGVNTPWNAMISGYSQSGC 405
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-DVKVQT 216
+EA++ Y +M + GI +D + A A +FG VHG ++ L+L V V
Sbjct: 406 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 465
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
++ D Y+K G L+ VF M +IV+W L++ ++Q+ L L M+ GF P
Sbjct: 466 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 525
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
+ + S L++CA + FL+ G+ +HG + D + +++IDMY+KCG + A +F
Sbjct: 526 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 585
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D++ + D++SW II+ Y HG E+AL LF +M + +K + T +L A SH G+VE
Sbjct: 586 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 645
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
EG ++F M Y + P +HYAC++DLL R G +++A++ + M EP VW LL G
Sbjct: 646 EGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H +GE A+K+L + P+ + L+SN + +E+ +R M+ G+KK P
Sbjct: 706 CRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 765
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
GYS + V G +H F D+ H Q ++I L++L +++A+
Sbjct: 766 GYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 806
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 229/445 (51%), Gaps = 6/445 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y ++ +A +F+E+P R V ++ +I+ + F+ + +M+ + PD
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
++ +++C+ L L++G+ + + V G+ +FV +S+LN+Y K G + ++ F M
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ V W++MI+G NG EA D + RMK + ++ + +A L D G
Sbjct: 284 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 343
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF-KNMSRINIVT-WGALISGFAQN 256
V + + +V V T+L+DMY+K G L A VF N + T W A+ISG++Q+
Sbjct: 344 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 403
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV-L 314
G + LEL ++M G D + S A A L+ G+ +HG ++ D +V +
Sbjct: 404 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 463
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++ D YSKCG R +FD+M+ RD++SW ++ +Y GEEAL+ F M E
Sbjct: 464 NNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGF 523
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ TF+S+L + + +E GR L+ K + + + ++D+ A+ G + EA
Sbjct: 524 APNQFTFSSVLISCASLCFLEYGRQVHGLLC-KAGLDTEKCIESALIDMYAKCGSITEAG 582
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K+ D +S P + W A++SG H
Sbjct: 583 KVFDKISN-PDIVSWTAIISGYAQH 606
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 23/360 (6%)
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KC + A F++M ++++ W+ MI G +G + + M GI D+
Sbjct: 163 HVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKF 222
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+IQ+C L G VH + R + V TSL++MYAK G ++ + VF M
Sbjct: 223 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 282
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ N V+W A+ISG NGL +L + M++ P+ +LVS A ++ + +GK
Sbjct: 283 TEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 342
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGI 355
+ + N+++GT++IDMYSKCG AR++FD + WN +I+ Y
Sbjct: 343 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY--------WFDLMVSK 407
G +EAL L++QM + + D T+ S+ +A++ S ++ GR DLMV
Sbjct: 403 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 462
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ D ++ G +E+ K+ D M E + W L++ + + S+GE+
Sbjct: 463 VN--------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA---YSQSSLGEE 510
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 5/280 (1%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHL-NLDVKVQ-TSLVDMYAKTGHLDLASHVFKN 237
++ +++ CA+ G R +VHG ++ + + D+ V +Y+K A VF
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M + N+ +W +I G ++GL + EM + G PD + + + +C + L+LG
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H V R F ++ + TS+++MY+K G + +F+ M + +SWN +I+ +
Sbjct: 241 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 300
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G EA LF++M P+ T S+ A+ V G+ + S+ I+
Sbjct: 301 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNC-ASELGIEGNVLV 359
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAV-WVALLSG 455
++D+ ++ G + +A + D+ G+ W A++SG
Sbjct: 360 GTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG 399
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFN----LVLGTSVIDMYSKCGVPSCARALFD 336
L+ L CA+ G ++ K++HG ++ +F +VL +YSKC A +FD
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKS-NFEDKDLMVLFNHAAHVYSKCSEFRAACGVFD 179
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+M R++ SW V+I HG + F +M+ + + PD +++++ + +E
Sbjct: 180 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 239
Query: 397 GRYWFDLMVSKYKIQPTEKHY---ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
G+ ++ ++ ++ H ++++ A+ G +E++ + + M TE W A++
Sbjct: 240 GK----MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN-MMTEHNQVSWNAMI 294
Query: 454 SGCHNH 459
SGC ++
Sbjct: 295 SGCTSN 300
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 289/552 (52%), Gaps = 5/552 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPF 58
++ TN A ++ ++ LY I LF P + T+ ++I SR PF
Sbjct: 123 LVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPF 182
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L +N+M + P+ TF+ L AC L G++I + + ND FV +++L
Sbjct: 183 QALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALL 242
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KCG M A F++M ++LV W+SMI G V N A+ ++ + G D+V
Sbjct: 243 DMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQV 300
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++ ACA L + FG VHG ++R L V V+ SLVDMY K G + A+ +F
Sbjct: 301 SISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGG 360
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++VTW +I G + M G EPD S S A A I L G
Sbjct: 361 GDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGT 420
Query: 299 SIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH + ++ N + +S++ MY KCG A +F + + +++ W +I + HG
Sbjct: 421 MIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHG 480
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EA+ LF +M+ V P++ TF S+LSA SH+G +++G +F+ M + + I+P +HY
Sbjct: 481 CANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHY 540
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
ACMVDLL R G +EEA + ++SM EP VW ALL C H +G +VA+++ KL P
Sbjct: 541 ACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEP 600
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
D+ G + L+SN + EE VR+ M +G++K G S ++V F D+SH+
Sbjct: 601 DNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHS 660
Query: 538 QYEDIVYVLKKL 549
+ ++I +L+KL
Sbjct: 661 RTQEIYGMLQKL 672
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 293/541 (54%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + SAR +FE + + + + I+ Y + L L + M P+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF ALKA + L + + + ++ Y D VG +L LY + G M++A F
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + D+V WS MI NG EAVD + RM++ + +E + ++ CA S
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG ++ +LD+ V +L+D+YAK +D A +F +S N V+W +I G+
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-L 314
G G + E V+ SAL ACA + + LG +HG ++ + V +
Sbjct: 427 LGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAV 486
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMY+KCG A+++F++M++ D+ SWN +I+ Y HG G +AL + M +
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF +LS S++GL+++G+ F+ M+ + I+P +HY CMV LL R+G++++A+
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+++ + EP + +W A+LS N + A+++LK+NP D + LVSN +A +
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W VA +RK+M++ G+KK PG S +E G++H F + H + I +L+ +L M+
Sbjct: 667 QWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLE--WLNMK 724
Query: 555 A 555
A
Sbjct: 725 A 725
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 216/432 (50%), Gaps = 7/432 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+E+P R ++ ++ Y+ ++ +GLY+++ +E + FT LK VS
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQDP----IGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L ++ + V+LGY ++ FVG++++N Y CG ++ A FE + KD+V W+ +
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++ V NG +++ M+ G + ++A LG F VHG ++
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
LD +V L+ +Y + G + A VF M + ++V W +I+ F QNG ++L +
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
M+ P+ +L S L CA LG+ +HG V+ FD ++ + ++ID+Y+KC
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A LF ++ S++ +SWN +I Y G G +A S+F + + V TF+S L A
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGA 458
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
+ ++ G L + + + ++D+ A+ G+++ A + + M T +A
Sbjct: 459 CASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEMET-IDVA 516
Query: 448 VWVALLSGCHNH 459
W AL+SG H
Sbjct: 517 SWNALISGYSTH 528
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 192/395 (48%), Gaps = 27/395 (6%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS + L+ C+ D + I ++ G D+F + +LN YVK G +A+ F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M ++ V + ++ G ++ + Y R+ +EG + + V ++ L +
Sbjct: 108 DEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H ++ + + V +L++ Y+ G +D A VF+ + +IV W ++S +
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+NG +L+LL M+ GF P++ + +AL A +G K +HG ++ + +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++ +Y++ G S A +F++M D++ W+ +IA + +G EA+ LF++M E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 374 VKPDHSTFASLLSALSHS----------GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
V P+ T +S+L+ + GLV + + D+ VS ++D+
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN-----------ALIDV 392
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
A+ +++ A+K+ +S++ ++ W ++ G N
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVS-WNTVIVGYEN 426
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IKTN + +I +Y DI A+ +F E+ V ++N++I YS + L
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL 535
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV-ELGYGNDVFVGSSMLNL 120
+ + M D +P+ TF L C + + G+E + + + G + + M+ L
Sbjct: 536 RILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRL 595
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+ G++++AM E + ++ W +M++
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 283/528 (53%), Gaps = 2/528 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A+ L + P R V T+ ++I + L +++M +E+++P+ TF A KA +
Sbjct: 11 AQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTA 70
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L G++I A++LG ND FVG S ++Y K G EA F++M +++ W++
Sbjct: 71 LCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAY 130
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+ V +G+P +A+D + ++ G + D + + ACAD G +HG IR
Sbjct: 131 ISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGF 190
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
DV V ++D+Y K ++LA VF M R N V+W +++ QN + +
Sbjct: 191 EGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLM 250
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
+ G E + S + A A I L+ G+S+H V+ + ++ +G++++DMY KCG
Sbjct: 251 GRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGS 310
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+F +M R+L+SWN +I+ Y G + A++LF +M V ++ T +LSA
Sbjct: 311 IEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSA 369
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
S G V+ G F+ M +Y+I+P +HYAC+ D+L RAG VE A + V M P ++
Sbjct: 370 CSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTIS 429
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMR 507
VW ALL+ C + + +G+ A + KL+P D G H L+SN FA +W+E VRK M+
Sbjct: 430 VWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMK 489
Query: 508 KSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
G+KK G S V ++H F +D SH + +I +L KL EM+A
Sbjct: 490 DVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQA 537
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 161/337 (47%), Gaps = 3/337 (0%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K N A + + + +V W+++I+G V NG A+ + +M++E I ++
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+A L G +H +++ D V S DMY+KTG A +F M
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+ W A IS +G G ++ +E + G EPD ++ + L ACA L LG+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG +R F+ ++ + +ID+Y KC A +F+ M R+ +SW ++A+ +
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
E+A +FL + ++ +S++SA + +E GR L V K ++ +
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAV-KACVEGDIFVGS 299
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ + G +E+ ++ M E L W A++SG
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISG 335
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
II +YG ++ A +F + R ++ +++ A + + + ++ KE +
Sbjct: 200 IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT 259
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + A + L+ G + AV+ D+FVGS+++++Y KCG + + F
Sbjct: 260 DYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M ++LV W++MI+G G A+ ++ M+ E + A+ V ++ ++ AC+ G +
Sbjct: 320 EMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKL 378
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
G + S+R ++ + + DM + G ++ A + M R I WGAL++
Sbjct: 379 GNEIF-ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNA 437
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 306/560 (54%), Gaps = 20/560 (3%)
Query: 7 SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
SAY N++ ++ + + AR +F+ + + + ++N II AY+ + P L L+ +
Sbjct: 75 SAYLNNL--LVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAK 132
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW-RKAVELGYGNDVFVGSSMLNLYVKCG 125
M DV P + TF AL AC SL DL+ G EI R G V + +++ ++Y KCG
Sbjct: 133 M---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCG 189
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR-EAVDAYKRMKKEGIDADEVVMMGLI 184
++ A F+++ K++V W+++I +G +A+D +++M + G+ +G++
Sbjct: 190 DLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVL 249
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVK---VQTSLVDMYAKTGHLDLASHVFKNMSRI 241
AC D+ +H + L DV+ VQ +L++MYAK G L++A +F+ M R
Sbjct: 250 GACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRR 306
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ V+ +I+ FAQ GL ++++ EM G D + S + AC+ G L+ GK IH
Sbjct: 307 DQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIH 366
Query: 302 GYTV-----RRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
V R+ N+V+ T+++ MY KCG A+A+F M +++ +SWN ++A+
Sbjct: 367 KRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAH 426
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
G G+EA + V+ D ++F S+L A SHSG++E F LM+S + + P +
Sbjct: 427 QGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAE 486
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+Y CMVDLLAR+G + +A ++++SM P W LL GC A++ L
Sbjct: 487 NYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNL 546
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKK-VPGYSVVEVNGELHAFIMEDK 534
P + + L+S+ ++ K +E+ +R +M++ G++K VPG SV+EV+G +H F+ D
Sbjct: 547 EPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDS 606
Query: 535 SHNQYEDIVYVLKKLYLEMR 554
SH Q + I+ L L +E++
Sbjct: 607 SHPQIDKILRELDILNVELK 626
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 207/419 (49%), Gaps = 39/419 (9%)
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF 112
RK P + L + +++ DS F A+++C + + I +K G G+ +
Sbjct: 30 RKHDPLDSL-------EREIQSDS--FAAAIRSCKDSNSVSI---IHQKITRAGLGSSAY 77
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ + ++ + K G + EA F+ +Q K++ W+ +I+ G P A+ + +M
Sbjct: 78 LNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMD--- 134
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHG-YSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
+ + + AC+ LGD + G +H R + V + T++ MYAK G L A
Sbjct: 135 VPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTA 194
Query: 232 SHVFKNMSRINIVTWGALISGFAQNGLA-GSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
VF + N+V+W ALI+ +AQ+G + L+L +M G P + V L AC
Sbjct: 195 KSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACND 254
Query: 291 IGFLKLGKSIHGYTVR---RFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
+ L + IH V +FD V + ++++MY+KCG AR +F +MQ RD +S
Sbjct: 255 VTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSM 311
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
NV+IA++ G G+E++ +F +M + D +TFAS+++A S G +E G+ +
Sbjct: 312 NVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKR-----IH 366
Query: 407 KYKIQPTEKHYAC---------MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
K ++P C +V + + G +E+A + +M+T+ ++ W A+L+ C
Sbjct: 367 KRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVS-WNAMLAAC 424
>gi|357450559|ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484604|gb|AES65807.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1040
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 305/556 (54%), Gaps = 8/556 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K + A+ +I LYG ++ L E + ++ +N++I E
Sbjct: 146 VVKLGMDAFDLVGNTLIELYG----FLNGNGLVERKSVTKLNFWNNLIYEAYESGKIVES 201
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ +M E+V+P+S T L+A V LK+G+ + V ++ V +++L++
Sbjct: 202 FELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSM 261
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K + +A + FEKM KD+V W+ MI+ +G P+E+++ M + GI D
Sbjct: 262 YAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTA 321
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ I + L +G +H IR + V V SLVDMY+ L+ A +F +
Sbjct: 322 IPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKD 381
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+V+W A+I G+A + L L +EM+ G + D V +++ L A A+IG L +
Sbjct: 382 RTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYL 441
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS--RDLISWNVIIASYGIHG 357
HGY+++ D L TS+++ Y+KCG AR LF++ +S +D+++WN +I +Y HG
Sbjct: 442 HGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHG 501
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
+ L+ Q+ ++VKPDH TF +L+A +SGLV++G+ F MV Y QP+++H
Sbjct: 502 EWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHN 561
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK-KFSIGEKVAKKVLKLN 476
ACMVDLL RAG+++EA KI+++ V+ LLS C H + E A+K++K+
Sbjct: 562 ACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKME 621
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P++ + L+SN FA KW++ A +R +R G+KK PG S V ++G+ H F + D SH
Sbjct: 622 PENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSH 681
Query: 537 NQYEDIVYVLKKLYLE 552
+ EDI VLK L LE
Sbjct: 682 PRSEDIYSVLKVLELE 697
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 14/261 (5%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H L+ + + + L+D Y+ G L + +F + + + A + G
Sbjct: 40 IHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGE 99
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK-LGKSIHGYTVR----RFDFNLV 313
TL L EM PD S L + + K L HG+ V+ FD +
Sbjct: 100 YEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDAFD---L 156
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++I++Y L ++ L WN +I G E+ LF +M
Sbjct: 157 VGNTLIELYGFLN----GNGLVERKSVTKLNFWNNLIYEAYESGKIVESFELFCRMRNEN 212
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V+P+ T +LL A S ++ G+ L+V+ + + A ++ + A+ +++A
Sbjct: 213 VQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTA-LLSMYAKLDSLKDA 271
Query: 434 LKIVDSMSTEPGLAVWVALLS 454
+ + M E + VW ++S
Sbjct: 272 RLMFEKMP-EKDVVVWNIMIS 291
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 311/538 (57%), Gaps = 9/538 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y D++S+ ++FE++ + ++ ++I +Y+R E + L +++MIK + P+
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 76 SSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
T L +C + ++ G+ + R+ ++ Y + + +++ LY +CGK+++
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCE 359
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ +++V W+S+I+ G +A+ +++M + I D + I AC + G
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +HG+ IR ++ D VQ SL+DMY+K+G +D AS VF + ++VTW +++
Sbjct: 420 LVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
GF+QNG + + L M E + V+ ++ + AC+ IG L+ GK +H + +
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD 538
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L T++IDMY+KCG + A +F M SR ++SW+ +I +YG+HG A+S F QM+E
Sbjct: 539 LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ KP+ F ++LSA HSG VEEG+Y+F+LM S + + P +H+AC +DLL+R+G+++
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLK 657
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + + M +VW +L++GC H+K I + + + + DD G + L+SN +A
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYA 717
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
E +WEE +R M+ S +KKVPGYS +E++ ++ F +++ Q ++I L L
Sbjct: 718 EEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 238/450 (52%), Gaps = 14/450 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++I Y S+R +FE P Y +I + LY++++ E
Sbjct: 37 VTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETT 96
Query: 73 RPDSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ F L+AC S L +G ++ + ++ G +D + +S+L +Y + G +++A
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE 156
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ M +DLV WS++++ + NG+ +A+ +K M +G++ D V M+ +++ CA+LG
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R SVHG R+ +LD + SL+ MY+K G L + +F+ +++ N V+W A+IS
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ + + L EM G EP+ V+L S L +C IG ++ GKS+HG+ VRR D
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 311 NL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N L +++++Y++CG S + + R++++WN +I+ Y G +AL LF QM
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGR----YWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ +KPD T AS +SA ++GLV G+ + VS +Q + ++D+ +
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS------LIDMYS 450
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++G V+ A + + + + W ++L G
Sbjct: 451 KSGSVDSASTVFNQIK-HRSVVTWNSMLCG 479
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 235/427 (55%), Gaps = 5/427 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG ++ A K+F+ +P+R + +++++ + + L ++ M+ + V PD
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T ++ C L L++ + + + D + +S+L +Y KCG + + FE
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFE 261
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ +K+ V W++MI+ +A+ ++ M K GI+ + V + ++ +C +G R
Sbjct: 262 KIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 196 GLSVHGYSIRRHLNLDVK-VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHG+++RR L+ + + + +LV++YA+ G L V + +S NIV W +LIS +A
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
G+ L L +M + +PD+ +L S++ AC G + LGK IHG+ +R + +
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV 441
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+IDMYSK G A +F+Q++ R +++WN ++ + +G+ EA+SLF M + +
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 375 KPDHSTFASLLSALSHSGLVEEGRY-WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ + TF +++ A S G +E+G++ L++S K T+ ++D+ A+ G++ A
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD---TALIDMYAKCGDLNAA 558
Query: 434 LKIVDSM 440
+ +M
Sbjct: 559 ETVFRAM 565
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 278/512 (54%), Gaps = 36/512 (7%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS ++ L + + +++ + I+ + E + +SM+ L+ G + EA F
Sbjct: 278 DSVSWNSILAGYIEIGNVEEAKHIYHQMPE----RSIIASNSMIVLFGMRGLVVEACKLF 333
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M KD+V WS++I N EA+ + M K G+ DEVV + + ACA+L
Sbjct: 334 DEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVN 393
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL-------------------------- 228
G +H S++ + +Q +L+ MY+K G +
Sbjct: 394 MGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYL 453
Query: 229 -----DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
D A +F +M ++V+W ++ISG+AQN L TL L EMQ GF+PD +LVS
Sbjct: 454 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 513
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
+ ACA++ L+ GK +H Y R N++LGT++IDMY KCG A +F M +
Sbjct: 514 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 573
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+ +WN +I ++G E +L +F M + V P+ TF +L A H GLV+EG++ F
Sbjct: 574 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 633
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
M+ +KIQP KHY CMVDLL RAG+++EA ++++ M P +A W ALL C H
Sbjct: 634 SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDS 693
Query: 463 SIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+G +V +K+++L PD G H L+SN +A + KW++V +R M K + K+PG S++E
Sbjct: 694 EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEA 753
Query: 523 NGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
NG +H F+ DK+H + I +L ++ ++++
Sbjct: 754 NGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLK 785
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 197/408 (48%), Gaps = 38/408 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I L+G + +V A KLF+E+ + + T++++I + + E E + + M K V D
Sbjct: 316 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 375
Query: 76 SSTFTVALKACVSLM-----------DLKMGEE--------------------IWRKAVE 104
AL AC +L+ LK+G E + RK +
Sbjct: 376 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD 435
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
Y D+ +SM++ Y+KC ++ A F+ M KD+V WSSMI+G N E +
Sbjct: 436 EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLAL 495
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
++ M+ G DE ++ +I ACA L G VH Y R L ++V + T+L+DMY K
Sbjct: 496 FQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMK 555
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G ++ A VF M I TW ALI G A NGL S+L++ M+ C P+ ++ +
Sbjct: 556 CGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGV 615
Query: 285 LLACAQIGFLKLGKSIHGYTV---RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-S 340
L AC +G + G+ H Y++ + N+ ++D+ + G A L ++M +
Sbjct: 616 LGACRHMGLVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 674
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
D+ +W ++ + HG E + ++IE ++PDH F LLS +
Sbjct: 675 PDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLSNI 720
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 191/438 (43%), Gaps = 73/438 (16%)
Query: 50 AYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN 109
AY + SP LY M+ + D+ T+ + ++AC +++ ++LG+ +
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV+V ++++N + C M +A F + D V W+S++ G + G EA Y +M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ I A S++ ++ G +
Sbjct: 307 ERSIIA---------------------------------------SNSMIVLFGMRGLVV 327
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A +F M ++VTW ALI+ F QN + + + M G D V VSAL ACA
Sbjct: 328 EACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 387
Query: 290 QIGFLKLGKSIHGYTV----------------------------RRFD----FNLVLGTS 317
+ + +GK IH ++ + FD +L+ S
Sbjct: 388 NLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 447
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+I Y KC + A+A+FD M +D++SW+ +I+ Y + +E L+LF +M + KPD
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 507
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+T S++SA + +E+G+ W + + + ++D+ + G VE AL++
Sbjct: 508 ETTLVSVISACARLAALEQGK-WVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566
Query: 438 DSMSTEPGLAVWVALLSG 455
M E G++ W AL+ G
Sbjct: 567 YGM-IEKGISTWNALILG 583
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEE-------------------------- 35
+K +Y N +I +Y DI+ ARKLF+E
Sbjct: 403 LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAK 462
Query: 36 -----LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLM 90
+P + V +++S+I Y++ + E L L+ +M +PD +T + AC L
Sbjct: 463 AIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLA 522
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
L+ G+ + G +V +G++++++Y+KCG + A+ F M K + W+++I
Sbjct: 523 ALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALIL 582
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC-----ADLGDSRFGLSVHGYSIR 205
GL NG ++D + MKK + +E+ MG++ AC D G F +H + I+
Sbjct: 583 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ 642
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNG 257
+VK +VD+ + G L A + M ++ TWGAL+ ++G
Sbjct: 643 P----NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 691
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 264/449 (58%), Gaps = 6/449 (1%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G D+ + + +L Y + +++A F+ + +D WS M+ G G +
Sbjct: 30 GTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATF 89
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ + + G+ D + +I+ C D D + G +H ++ L D V SLVDMYAK
Sbjct: 90 RELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKC 149
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
++ A +F+ M ++VTW +I +A A +L L M+ G PD V++V+ +
Sbjct: 150 IVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVV 208
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
ACA++G + + + Y VR F +++LGT++IDMY+KCG AR +FD+M+ +++I
Sbjct: 209 NACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVI 268
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SW+ +IA+YG HG G++A+ LF M+ + P+ TF SLL A SH+GL+EEG +F+ M
Sbjct: 269 SWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSM 328
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
++ ++P KHY CMVDLL RAG ++EAL+++++M+ E +W ALL C H K +
Sbjct: 329 WEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMEL 388
Query: 465 GEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
EK A +L+L P + G + L+SN +A KWE+VA R M + +KK+PG++ +EV+
Sbjct: 389 AEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDN 448
Query: 525 ELHAFIMEDKSHNQ----YEDIVYVLKKL 549
+ + F + D+SH Q YE ++ ++KKL
Sbjct: 449 KTYQFSVGDRSHPQSKEIYEMLMSLIKKL 477
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 226/463 (48%), Gaps = 52/463 (11%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ Y I A LF+ L +R T++ ++ +++ + ++++ V
Sbjct: 39 NKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVT 98
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD+ T ++ C DL++G I ++ G +D FV +S++++Y KC + +A
Sbjct: 99 PDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRL 158
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE+M KDLV W+ MI G + E++ + RM++EG+ D+V M+ ++ ACA LG
Sbjct: 159 FERMLSKDLVTWTVMI-GAYADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAM 217
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ Y +R +LDV + T+++DMYAK G ++ A VF M N+++W A+I+ +
Sbjct: 218 HRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAY 277
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G ++L M SC P+ V+ VS L AC+ G ++ G RF FN
Sbjct: 278 GYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEG--------LRF-FN-- 326
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+++++ R D+ + ++ G G +EAL L IE
Sbjct: 327 -------------------SMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRL----IEA 363
Query: 373 M-VKPDHSTFASLLSALS-HSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGE 429
M V+ D +++LL A HS + + L+ ++QP HY + ++ A+AG+
Sbjct: 364 MTVEKDERLWSALLGACRIHSKMELAEKAANSLL----ELQPQNPGHYVLLSNIYAKAGK 419
Query: 430 VEEALKIVDSMSTE-----PGLAVWVALLSGCHNHKKFSIGEK 467
E+ K D M+ PG W+ + + + +FS+G++
Sbjct: 420 WEKVAKFRDMMTQRKLKKIPGW-TWIEVDNKTY---QFSVGDR 458
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 305/578 (52%), Gaps = 84/578 (14%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + AR LFE++ R + +NS+I + + E + L+N M P
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMM------PA 189
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T W +SM+ Y K G + A F+
Sbjct: 190 RNIIT------------------W---------------TSMVTGYAKMGDLESARRYFD 216
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + +V W++M + P+EA++ + +M +EGI D+ + I +C+ +GD
Sbjct: 217 EMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTL 276
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK------------------- 236
S+ ++H+ L+ V+T+L+DM+AK G+L++A ++F
Sbjct: 277 ADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYT 336
Query: 237 -------------NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLV 282
NM + ++V+W ++I+G+AQNG + ++EL EM SC +PD V++
Sbjct: 337 RVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIA 396
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQM 338
S L AC IG LKL + + N+ LG S+I MYSKCG + A +F M
Sbjct: 397 SVLSACGHIGALKLSYWVLDIVREK---NIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+RD++S+N +I+ + +GHG+EA+ L L M E ++PDH T+ +L+A SH+GL+ EG+
Sbjct: 454 GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK 513
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
F K PT HYACMVDLL RAGE++EA ++ SM +P V+ +LL+
Sbjct: 514 NVF-----KSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRI 568
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
HK+ +GE A K+ +L P +LG + L+SN +A +WE+V VR+ M+K G+KK G S
Sbjct: 569 HKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMS 628
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
VE G++H F + D+SH Q +DI +L +L +M+ +
Sbjct: 629 WVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRV 666
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 273/510 (53%), Gaps = 2/510 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLY-NQMIKEDVRP 74
I+ +Y D+ A + L + S++ Y + E L + ++ + V
Sbjct: 608 IVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLV 667
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + A L ++ G+ V D+ + +++L YVK G + +M F
Sbjct: 668 TPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLF 727
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E M +D++ WS MI G V +G Y+ M K + + V ++ ++QACA + D+
Sbjct: 728 EGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAE 787
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ L++ V T+LVDMY K + A +F M + ++V W A+I G
Sbjct: 788 EGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLT 847
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN L G +L M PD+V++V L AC++ G +L +HGY VR F+ N
Sbjct: 848 QNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAF 907
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++D+YSKCG A +F+ +D++ W +IA YG HG G+EA++L+ +MI +
Sbjct: 908 VAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASS 967
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P++ TF S+LSA SHSGLV+EG FD M + + P +H + MVDLL RAGE++EA
Sbjct: 968 IQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEA 1027
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++++ M W ALL+ C H + E AK +LKL+PD +G + L++N +A +
Sbjct: 1028 IRVIRDMDGRAVAHTWCALLAACRKHNNTKMSEVAAKNLLKLDPDHVGYYNLLTNLYAFD 1087
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVN 523
+KWE V R ++ ++KV GYS VEV
Sbjct: 1088 EKWENVKDTRDMVKGRDLRKVAGYSSVEVT 1117
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 209/391 (53%), Gaps = 5/391 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ +LS V ++ Y D+ ++ +LFE + R V T++ +I Y +
Sbjct: 695 VVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTG 754
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+Y +M+K V+P+S T L+AC ++D + G+ + R AV +G ++ V ++++++
Sbjct: 755 FRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDM 814
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y+KC EAM F +M +KD+V W+++I GL N P E++ ++K M D V M
Sbjct: 815 YMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTM 874
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ AC++ G +R + +HGY +R N + V +L+D+Y+K G LD A VF+ +
Sbjct: 875 VKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTE 934
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV WG++I+G+ +GL + L M + +P++V+ +S L AC+ G ++ G I
Sbjct: 935 KDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQI 994
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI-SWNVIIASYGIHG 357
+ F N ++++D+ + G A + M R + +W ++A+ H
Sbjct: 995 FDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKHN 1054
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ + + +++ + PDH + +LL+ L
Sbjct: 1055 NTKMSEVAAKNLLK--LDPDHVGYYNLLTNL 1083
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 223/438 (50%), Gaps = 16/438 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR LF+E+ N+++ A+ R + L Q ++ VR D T ++ L+AC +
Sbjct: 522 ARDLFDEIRSPTPRLANALLRAHIRARQ-WRAAILLGQRLR--VRRDGFTLSLLLRACTA 578
Query: 89 LMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L L G + AV D FV ++++ +Y +CG M A+ A+ +++ D+V +S
Sbjct: 579 LPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTS 638
Query: 148 MINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
++ G NG EA++ + R + +G+ V ++ ++ A A LG R G + H Y +R
Sbjct: 639 VVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRN 698
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
L+ D+ + +++ Y K G L + +F+ M+ +++TW +I G+ Q+G A + +
Sbjct: 699 SLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMY 758
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
EM +P+SV+LVS L ACA + + GK +H V + L + T+++DMY KC
Sbjct: 759 REMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKC 818
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
A LF +M +D+++W +I + E+L F M+ PD T +L
Sbjct: 819 SCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVL 878
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKH----YACMVDLLARAGEVEEALKIVDSMS 441
+A S E G + + Y ++ + A ++DL ++ G+++ A+++ + +
Sbjct: 879 AACS-----EFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEG-T 932
Query: 442 TEPGLAVWVALLSGCHNH 459
TE + VW ++++G H
Sbjct: 933 TEKDIVVWGSMIAGYGAH 950
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 281/524 (53%), Gaps = 34/524 (6%)
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
Y Q ++ +RP+ TF LKA VS ++K GEE+ V G+ FV ++L YV
Sbjct: 79 YMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVA 138
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG + + F++M++ LV W+ +I V P +A++ ++ M++ G+ D V + +
Sbjct: 139 CGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTV 198
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD-------------- 229
+ AC LGD ++H + + + +D V ++L+ Y + G LD
Sbjct: 199 VSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNI 258
Query: 230 -----------------LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
L +F++M ++V+W ++I GFA+ G L EM+
Sbjct: 259 VVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFS 318
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL--VLGTSVIDMYSKCGVPSC 330
G P++++L+S L ACA G L G IH Y V + D N L +S+IDMYSKCG
Sbjct: 319 GVSPNALTLLSTLSACASHGALDTGAWIHAY-VDKNDMNRDGSLDSSLIDMYSKCGDIDK 377
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +F++ RDL +W I+ +HG GE+AL F +M E V+PD T +LSA +H
Sbjct: 378 AVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAH 437
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+++G ++F M + + P +HY CMVDLL R G ++EA ++ M E +W
Sbjct: 438 AGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWG 497
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
A LS C H +GE A+++L L+P D ++SN +A E KW+ G+RK ++K G
Sbjct: 498 AFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKG 557
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+KK PG S +EVNG +H F++ D SH Y +I +++K+ MR
Sbjct: 558 LKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKLMR 601
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 31/328 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++T + G ++ Y + R++F+E+ G+ + II AY P +
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKA 176
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ M + + PD + + AC L DL + + + + G D FV S++++
Sbjct: 177 LELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLIST 236
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCW-------------------------------SSMI 149
Y +CG ++ A F++ K++V W +SMI
Sbjct: 237 YGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMI 296
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
G GQ +EA+ + M+ G+ + + ++ + ACA G G +H Y + +N
Sbjct: 297 GGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMN 356
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
D + +SL+DMY+K G +D A +F+ +R ++ TW +++ G A +G L +M
Sbjct: 357 RDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKM 416
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ +PD V++V L ACA G L G
Sbjct: 417 KEAQVQPDDVTMVGVLSACAHAGLLDQG 444
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 12/235 (5%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
N++ ++LF+ +P R V ++NS+I ++R E L +++M V P++ T L
Sbjct: 272 NNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTL 331
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
AC S L G I + D + SS++++Y KCG +++A+ FE+ R+DL
Sbjct: 332 SACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLF 391
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY- 202
W+S++ GL +G+ +A+ + +MK+ + D+V M+G++ ACA GL G+
Sbjct: 392 TWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACA-----HAGLLDQGWW 446
Query: 203 ---SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
S+ + L KV+ +VD+ + G L A + M N + WGA +S
Sbjct: 447 YFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLS 501
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 19/302 (6%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
M +Q L +RF +H + L + V+ + LD A
Sbjct: 1 MRACMQRFPQLSHTRFSFRLHPLTNPNKLPRIHGNTIATVEDPSAASRLDCA-------- 52
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQS--CGFEPDSVSLVSALLACAQIGFLKLG 297
N+ W +I +NGL LL MQ G P+ + + L A +K G
Sbjct: 53 --NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEG 110
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +H VR F + + +++ Y CG+ R +FD+M+ L+ W +II +Y
Sbjct: 111 EEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCV 170
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
E+AL LF M E + PD ++++SA G + + + K I+
Sbjct: 171 TFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKA-MHCFIEKSGIEVDAFV 229
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+ ++ G ++ A + + + VW ++ H +G K++ +
Sbjct: 230 SSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELG----KQLFQSM 284
Query: 477 PD 478
PD
Sbjct: 285 PD 286
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 305/578 (52%), Gaps = 84/578 (14%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + AR LFE++ R + +NS+I + + E + L+N M P
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMM------PA 189
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T W +SM+ Y K G + A F+
Sbjct: 190 RNIIT------------------W---------------TSMVTGYAKMGDLESARRYFD 216
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + +V W++M + P+EA++ + +M +EGI D+ + I +C+ +GD
Sbjct: 217 EMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTL 276
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK------------------- 236
S+ ++H+ L+ V+T+L+DM+AK G+L++A ++F
Sbjct: 277 ADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYT 336
Query: 237 -------------NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLV 282
NM + ++V+W ++I+G+AQNG + ++EL EM SC +PD V++
Sbjct: 337 RVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIA 396
Query: 283 SALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQM 338
S L AC IG LKL + + N+ LG S+I MYSKCG + A +F M
Sbjct: 397 SVLSACGHIGALKLSYWVLDIVREK---NIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+RD++S+N +I+ + +GHG+EA+ L L M E ++PDH T+ +L+A SH+GL+ EG+
Sbjct: 454 GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK 513
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
F K PT HYACMVDLL RAGE++EA ++ SM +P V+ +LL+
Sbjct: 514 NVF-----KSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRI 568
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
HK+ +GE A K+ +L P +LG + L+SN +A +WE+V VR+ M+K G+KK G S
Sbjct: 569 HKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMS 628
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
VE G++H F + D+SH Q +DI +L +L +M+ +
Sbjct: 629 WVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRV 666
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 267/502 (53%), Gaps = 37/502 (7%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD T+ +ALK+C + DL +G +I +L +V+V S +++Y +CG+ +A
Sbjct: 121 PDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRV 180
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGD 192
F+ M +D+V W++MI G G A++ +K+ + +G D M G++ A +
Sbjct: 181 FDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN--- 237
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
AK + VF NM +++W A+++
Sbjct: 238 ------------------------------AKPDDIRFVRRVFDNMQFKELISWNAMLAV 267
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+A N +EL M M+ EPDS++L + L C ++ +GK IH R+ N
Sbjct: 268 YANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPN 327
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L+L +++DMY+ CG AR +FD M +RD+ISW II++YG HGHG EA+ LF +M+
Sbjct: 328 LLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLG 387
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++PD F ++L+A SH+GL+ +G+++FD M S+Y I P +HY CMVDLL RAG +
Sbjct: 388 QGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCIN 447
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + +M EP VW ALL C H IG A + L P+ G + L+SN +A
Sbjct: 448 EAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYA 507
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W +V VR M G+KK PG S+VE+ ++H F + D+ H Q E I + L +L
Sbjct: 508 RAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLG 567
Query: 552 EMRAI--SSWLQGHMEEHEEHD 571
++R + + ++ + + EE D
Sbjct: 568 KIRGMGYNPEVEATLHDVEEED 589
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R V +S I YSR P + +++ M DV S +A A V L D + E+
Sbjct: 156 RNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVV--SWNAMIAGFARVGLFDRAI--EV 211
Query: 99 WRKAVEL-GYGNDVFVGSSMLNLY--VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
+++ V L G D + +L K + F+ MQ K+L+ W++M+ N
Sbjct: 212 FKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANN 271
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
+AV+ + M+K+ ++ D + + ++ C +L G +H R+++ ++ ++
Sbjct: 272 EFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLE 331
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+L+DMYA G L A +F MS ++++W ++IS + ++G ++L +M G E
Sbjct: 332 NALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLE 391
Query: 276 PDSVSLVSALLACAQIGFLKLGK 298
PDS++ V+ L AC+ G L GK
Sbjct: 392 PDSIAFVAVLAACSHAGLLADGK 414
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 170/383 (44%), Gaps = 48/383 (12%)
Query: 117 MLNLYVKCGKMNEAMVAFEK-----MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
++ Y C + A E R VC++ +I L + R+A+ + M+
Sbjct: 56 LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115
Query: 172 GIDA--DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
G D +++C+ D GL +H + L+ +V V S + MY++ G +
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLAC 288
A VF M ++V+W A+I+GFA+ GL +E+ + G PD+ ++ L A
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA- 234
Query: 289 AQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+G + + D V R +FD MQ ++LISWN
Sbjct: 235 -------MGNA------KPDDIRFV------------------RRVFDNMQFKELISWNA 263
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
++A Y + +A+ LF+ M + V+PD T A++L G+ ++ + +
Sbjct: 264 MLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEI-IKRK 322
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGE 466
+ P ++D+ A G +++A +I D MS ++ W +++S G H H + ++
Sbjct: 323 NMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVIS-WTSIISAYGKHGHGREAV-- 379
Query: 467 KVAKKVL--KLNPDDLGIHALVS 487
+ +K+L L PD + A+++
Sbjct: 380 DLFEKMLGQGLEPDSIAFVAVLA 402
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ + R V ++ SII AY + E + L+ +M+ + + PD
Sbjct: 334 LMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPD 393
Query: 76 SSTFTVALKAC 86
S F L AC
Sbjct: 394 SIAFVAVLAAC 404
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 294/525 (56%), Gaps = 16/525 (3%)
Query: 36 LPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS--STFTVALKACVSLMD 91
+PLR + YN I SR + P +L ++++ P++ S +A+ +C S+ +
Sbjct: 1 MPLRWNSSILYNFFI--QSRTQYPL-LLHRSFHLVRQCATPEAIVSALLIAVNSCPSISN 57
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+ EI + + D F+G ++ Y K G +A+ F+ M KDLV W+S+I+G
Sbjct: 58 CR---EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISG 114
Query: 152 LVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
F+ ++ A+ MK E + +EV ++ +I AC+ D+ G +HG+ I+ L
Sbjct: 115 --FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDA--GKYIHGFGIKVGGTL 170
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+VKV SL++MY K+G L A +F+ + N V+W ++I+ NG A ++ +M+
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPS 329
G E D ++++ L AC +G KL +SIHG F + + T+++D Y+K G S
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+ +F ++ D ++W ++A Y HG G EA+ LF M ++PDH TF LLSA S
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
HSGLV EG+ +F++M Y I+P HY+CMVDLL R G + +A +++ +M EP VW
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
ALL C H +G++VA+ ++ + P D + ++SN ++ + W++ A VR +++
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+K+ PGYS +E + H F + D+SH + E I L++L ++R
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIR 515
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 171/340 (50%), Gaps = 16/340 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A KLF+++P + + ++NS+I +SR + Y + V+P+ T + AC
Sbjct: 93 ALKLFDDMPHKDLVSWNSLISGFSRCLH-MSLTAFYTMKFEMSVKPNEVTILSMISACSG 151
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+D G+ I +++G +V V +S++N+Y K G + A FE + + V W+S+
Sbjct: 152 ALD--AGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I V NG RE +D + +M++ GI+ DE ++ L+QAC LG + S+HG
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGF 269
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + T+L+D YAK G L + VF + + V W A+++G+A +GL ++L
Sbjct: 270 GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFES 329
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKS-------IHGYTVRRFDFNLVLGTSVIDM 321
M + G EPD V+ L AC+ G + GKS ++G R + + ++D+
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHY-----SCMVDL 384
Query: 322 YSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+CG+ + A + M + W ++ + +HG+ E
Sbjct: 385 LGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 15/284 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG D+ SA +LFE +P ++NSII A E + +N+M + + D
Sbjct: 178 LINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQD 237
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L+AC+ L K+ E I G+G + + +++L+ Y K G+++ + F
Sbjct: 238 EGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFT 297
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DL 190
++ D V W++M+ G +G REA+ ++ M +G++ D V L+ AC+ +
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
G S F + Y I V + +VD+ + G L+ A V +NM N WGAL
Sbjct: 358 GKSYFNVMSEVYGIEPR----VDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGAL 413
Query: 250 ISGFAQNG---LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+ +G L E L+ M+ +P + ++S + + ++
Sbjct: 414 LGACRVHGNIELGKEVAEHLINMEP--LDPRNYIMLSNMYSASR 455
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 305/614 (49%), Gaps = 98/614 (15%)
Query: 31 KLFEELPLRGVDTYNSIIIAY-SRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSL 89
++F L T+N+I+ A+ + SP + L Y + +PDS T+ + L+ C +
Sbjct: 59 RIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAAR 118
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC------------------------- 124
+ G ++ AV G+ DV+V ++++NLY C
Sbjct: 119 VSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178
Query: 125 ------GKMNEAMVAFEKM---------------------------------QRKDLVCW 145
G++ EA FE M + +D+V W
Sbjct: 179 AGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSW 238
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S+M++ N EA+ + MK G+ DEVV++ + AC+ + + G VHG +++
Sbjct: 239 SAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVK 298
Query: 206 RHLNLDVKVQTSLVDMYAKTGH--------------LDL------------------ASH 233
+ V ++ +L+ +Y+ G LDL A
Sbjct: 299 VGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEM 358
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
+F +M ++V+W A+ISG+AQ+ L L EMQ G PD +LVSA+ AC +
Sbjct: 359 LFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLAT 418
Query: 294 LKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L LGK IH Y R + N++L T++IDMY KCG A +F M+ + + +WN +I
Sbjct: 419 LDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILG 478
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
++G E++L++F M +T P+ TF +L A H GLV +GR++F+ M+ ++KI+
Sbjct: 479 LAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA 538
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
KHY CMVDLL RAG ++EA +++DSM P +A W ALL C H+ +GE++ +K+
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
++L PD G H L+SN +A + W V +R M + G+ K PG S++E NG +H F+
Sbjct: 599 IQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAG 658
Query: 533 DKSHNQYEDIVYVL 546
DK+H Q DI ++L
Sbjct: 659 DKTHPQINDIEHML 672
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 195/410 (47%), Gaps = 39/410 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+IAL+G K + AR++F + R D ++++++ Y + E E L L+ +M V
Sbjct: 208 MIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVA 267
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL------------- 120
D AL AC +++++MG + AV++G + V + +++++L
Sbjct: 268 VDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRI 327
Query: 121 -------------------YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
Y++CG + +A + F M KD+V WS+MI+G + EA
Sbjct: 328 FDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEA 387
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
+ ++ M+ G+ DE ++ I AC L G +H Y R L ++V + T+L+DM
Sbjct: 388 LALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDM 447
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
Y K G ++ A VF M + TW A+I G A NG +L + +M+ G P+ ++
Sbjct: 448 YMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITF 507
Query: 282 VSALLACAQIGFLKLGKSIHGYTV--RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
+ L AC +G + G+ + + + N+ ++D+ + G+ A L D M
Sbjct: 508 MGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMP 567
Query: 340 -SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
+ D+ +W ++ + H E L ++I+ ++PDH F LLS +
Sbjct: 568 MAPDVATWGALLGACRKHRDNEMGERLGRKLIQ--LQPDHDGFHVLLSNI 615
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 195/480 (40%), Gaps = 106/480 (22%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM---NEAMVA 133
ST L++C K ++ + + G D + S ++N + + ++
Sbjct: 4 STLDSLLQSCKCPRHFK---QLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI 60
Query: 134 FEKMQRKDLVCWSSMING-LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F ++ + W++++ L P +A+ YK D L+Q CA
Sbjct: 61 FNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVS 120
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H +++ + DV V+ +L+++YA G + A VF+ +++V+W L++G
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180
Query: 253 FAQ-----------------NGLAGSTLELLMEMQSC------------GFEPDSVS--- 280
+ Q N +A +++ L + C G E D VS
Sbjct: 181 YVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSA 240
Query: 281 --------------------------------LVSALLACAQIGFLKLGKSIHGYTV--- 305
+VSAL AC+++ +++G+ +HG V
Sbjct: 241 MVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG 300
Query: 306 -------------------------RRFD-----FNLVLGTSVIDMYSKCGVPSCARALF 335
R FD +L+ S+I Y +CG A LF
Sbjct: 301 VEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLF 360
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
M +D++SW+ +I+ Y H EAL+LF +M V+PD + S +SA +H ++
Sbjct: 361 YSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLD 420
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
G+ W +S+ K+Q ++D+ + G VE AL++ +M E G++ W A++ G
Sbjct: 421 LGK-WIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVILG 478
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 301/542 (55%), Gaps = 3/542 (0%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G+ +I +Y + A++LFE + R + S+I AY++ E E L ++ +M
Sbjct: 238 GSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQD 297
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMN 128
+V P+ T L +C L LK G+ + + G + +G ++++ Y C KM+
Sbjct: 298 SEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMS 357
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
+ +++V W+++I+ G EA+ + M +GI D + I A A
Sbjct: 358 SCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASA 417
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
G +FG +HG+ ++R D VQ SL+DMY+K G A +F + +IV W
Sbjct: 418 SSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNC 476
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
+I GF+QNG++ L L EM E + V+ +SA+ AC+ +G+L GK IH +
Sbjct: 477 MICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTG 536
Query: 309 DFN-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ N L + T+++DMY+KCG A+ +FD + + ++SW+ +IA++GIHG A SLF
Sbjct: 537 NQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFH 596
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M+ + +KP+ TF ++LSA H+G V+EG+++F+ M Y I P +H+A +VDLL+RA
Sbjct: 597 KMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRA 656
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G++ A +I+ S+ T ++W ALL+GC + + + E +A+++ ++ DD G + L+S
Sbjct: 657 GDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLS 716
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N +A W E VR M G+KKVPGYS VE++ +++ F D S Q ++I L+
Sbjct: 717 NIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEICMFLE 776
Query: 548 KL 549
Sbjct: 777 NF 778
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 254/515 (49%), Gaps = 38/515 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN---QMIKED 71
+++ Y + S+R +F P ++ +I + EVL L+N QM +
Sbjct: 38 KLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKL 97
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ + + ++A + +L +G ++ + ++ G+ D +G+S++ +Y + + +A
Sbjct: 98 TQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAK 157
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++M +DLV WSS+I+ V NG RE ++ ++ M EGI D V+++ + +AC +G
Sbjct: 158 KVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIG 217
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R SVHGY +R + D + SL+ MY++ G+L A +F+ + + W ++IS
Sbjct: 218 CLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMIS 277
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--D 309
+ QN L++ ++MQ EP+ V+++S L +CA++G LK GKS+H + +R
Sbjct: 278 AYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGV 337
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L LG ++ID YS C S L + + +++SWN +I+ Y G +EA++ F M
Sbjct: 338 TGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACM 397
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEG---------RYWFDLMV--------------- 405
+ + PD + AS +SA + SG ++ G R +FD V
Sbjct: 398 VAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFAS 457
Query: 406 SKYKIQPTEKH-----YACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCH 457
S Y I KH + CM+ ++ G EAL + D M E +++ + C
Sbjct: 458 SAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACS 517
Query: 458 NHKKFSIGEKVAKKVLKL-NPDDLGIHALVSNFFA 491
N G+ + K++ N +DL I + + +A
Sbjct: 518 NLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYA 552
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 292/547 (53%), Gaps = 42/547 (7%)
Query: 42 DTY--NSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW 99
D Y N++I +S + + ++N E DS ++ L + + +++ + I+
Sbjct: 112 DVYVRNTLINCFSVCSNMTDACRVFN----ESSVLDSVSWNSILAGYIEIGNVEEAKHIY 167
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
+ E + +SM+ L+ G + EA F++M KD+V WS++I N
Sbjct: 168 HQMPE----RSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYE 223
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
EA+ + M K G+ DEVV + + ACA+L G +H S++ + +Q +L+
Sbjct: 224 EAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALI 283
Query: 220 DMYAKTGHL-------------------------------DLASHVFKNMSRINIVTWGA 248
MY+K G + D A +F +M ++V+W +
Sbjct: 284 YMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSS 343
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+ISG+AQN L TL L EMQ GF+PD +LVS + ACA++ L+ GK +H Y R
Sbjct: 344 MISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNG 403
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
N++LGT++IDMY KCG A +F M + + +WN +I ++G E +L +F
Sbjct: 404 LTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFS 463
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M + V P+ TF +L A H GLV+EG++ F M+ +KIQP KHY CMVDLL RA
Sbjct: 464 NMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRA 523
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G+++EA ++++ M P +A W ALL C H +G +V +K+++L PD G H L+S
Sbjct: 524 GKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLS 583
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N +A + KW++V +R M K + K+PG S++E NG +H F+ DK+H + I +L
Sbjct: 584 NIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLV 643
Query: 548 KLYLEMR 554
++ ++++
Sbjct: 644 EMAMKLK 650
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 198/411 (48%), Gaps = 38/411 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I L+G + +V A KLF+E+ + + T++++I + + E E + + M K V D
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 240
Query: 76 SSTFTVALKACVSLM-----------DLKMGEE--------------------IWRKAVE 104
AL AC +L+ LK+G E + RK +
Sbjct: 241 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD 300
Query: 105 LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
Y D+ +SM++ Y+KC ++ A F+ M KD+V WSSMI+G N E +
Sbjct: 301 EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLAL 360
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
++ M+ G DE ++ +I ACA L G VH Y R L ++V + T+L+DMY K
Sbjct: 361 FQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMK 420
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G ++ A VF M I TW ALI G A NGL S+L++ M+ C P+ ++ +
Sbjct: 421 CGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGV 480
Query: 285 LLACAQIGFLKLGKSIHGYTV---RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQM-QS 340
L AC +G + G+ H Y++ + N+ ++D+ + G A L ++M +
Sbjct: 481 LGACRHMGLVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 539
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
D+ +W ++ + HG E + ++IE ++PDH F LLS + S
Sbjct: 540 PDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLSNIYAS 588
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 200/459 (43%), Gaps = 73/459 (15%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
R++F + +N +I AY + SP LY M+ + D+ T+ + ++AC
Sbjct: 31 TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSI 90
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+++ ++LG+ +DV+V ++++N + C M +A F + D V W+S+
Sbjct: 91 RRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSI 150
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ G + G EA Y +M + I A
Sbjct: 151 LAGYIEIGNVEEAKHIYHQMPERSIIA--------------------------------- 177
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
S++ ++ G + A +F M ++VTW ALI+ F QN + + +
Sbjct: 178 ------SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 231
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV----------------------- 305
M G D V VSAL ACA + + +GK IH ++
Sbjct: 232 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 291
Query: 306 -----RRFD----FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ FD +L+ S+I Y KC + A+A+FD M +D++SW+ +I+ Y +
Sbjct: 292 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 351
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
+E L+LF +M + KPD +T S++SA + +E+G+ W + + +
Sbjct: 352 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGK-WVHAYIKRNGLTINVIL 410
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ + G VE AL++ M E G++ W AL+ G
Sbjct: 411 GTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILG 448
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEE-------------------------- 35
+K +Y N +I +Y DI+ ARKLF+E
Sbjct: 268 LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAK 327
Query: 36 -----LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLM 90
+P + V +++S+I Y++ + E L L+ +M +PD +T + AC L
Sbjct: 328 AIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLA 387
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
L+ G+ + G +V +G++++++Y+KCG + A+ F M K + W+++I
Sbjct: 388 ALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALIL 447
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC-----ADLGDSRFGLSVHGYSIR 205
GL NG ++D + MKK + +E+ MG++ AC D G F +H + I+
Sbjct: 448 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ 507
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALISGFAQNG 257
+VK +VD+ + G L A + M ++ TWGAL+ ++G
Sbjct: 508 P----NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 556
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 292/549 (53%), Gaps = 54/549 (9%)
Query: 11 NSVGRIIALYG----GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
N+V + L G GK I AR+LF+++P+R V +N++I AY + E + L+ +
Sbjct: 232 NTVSWVTMLCGFARFGK--IAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFME 289
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M +++ S ++T + V + L ++ ++ Y N V ++M++ YV+ +
Sbjct: 290 MPEKN----SISWTTVINGYVRMGKLDEARQLLN---QMPYRN-VAAQTAMISGYVQNKR 341
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M++A F ++ +D+VCW++MI G G+ EA+ +K+M K+
Sbjct: 342 MDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKK--------------- 386
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
D+ ++V YA+ G +D A +F+ M NIV+W
Sbjct: 387 ------------------------DIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSW 422
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+LISG QNG L+ M M G +PD + L +CA + L++GK +H ++
Sbjct: 423 NSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMK 482
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
+ +L + ++I MY+KCG S A LF + D++SWN +IA+Y ++G+G EAL L
Sbjct: 483 SGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKL 542
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M V PD TF +LSA SH GL+++G F MV Y I+P +HYACMVDLL
Sbjct: 543 FHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLG 602
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG +EEA ++V M +W ALL C H + + A+K+L+ P + L
Sbjct: 603 RAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVL 662
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN A +W+EVA VR+ M++ G +K PG+S +E+ +HAF+ ED +H + ++ ++
Sbjct: 663 LSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHI 722
Query: 546 LKKLYLEMR 554
L+ L MR
Sbjct: 723 LRSLTAHMR 731
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 215/462 (46%), Gaps = 34/462 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ + I AR+LF+ +P R + ++NS+I AY + E L+++M D+
Sbjct: 52 MISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL--- 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++T+ + +L ++ L Y + ++M+ Y K + +EA F+
Sbjct: 109 -YSWTLMITCYTRNGELAKARNLFNL---LPYKWNPVCCNAMVAGYAKNRQFDEARRLFD 164
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KDLV W+SM+ G NG+ R + ++ M + + + +++ G + ++GD
Sbjct: 165 AMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFV----EVGD--- 217
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
L+ + N + +++ +A+ G + A +F M N+V W A+I+ + Q
Sbjct: 218 -LNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQ 276
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
N + L MEM E +S+S + + ++G L + + R N+
Sbjct: 277 NCHVDEAISLFMEMP----EKNSISWTTVINGYVRMGKLDEARQLLNQMPYR---NVAAQ 329
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
T++I Y + AR +F+Q+ RD++ WN +IA Y G +EAL LF Q MVK
Sbjct: 330 TAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQ----MVK 385
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
D ++ +++++ + G ++ F+ M K + + ++ L + G +ALK
Sbjct: 386 KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVS-----WNSLISGLTQNGSYLDALK 440
Query: 436 IVDSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
M E P + + LS C + +G+++ + V+K
Sbjct: 441 SFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMK 482
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 151/286 (52%), Gaps = 16/286 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M+K ++ ++ ++A Y + +A K+FEE+ + + ++NS+I ++ S +
Sbjct: 383 MVKKDIVSWNT----MVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDA 438
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + M E +PD STF L +C L L++G+++ + ++ GY D+FV ++++ +
Sbjct: 439 LKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITM 498
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++ A + F+ + D+V W+S+I NG REA+ + +M+ EG+ DEV
Sbjct: 499 YAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTF 558
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
+G++ AC+ +G GL + ++ + N++ + +VD+ + G L+ A + + M
Sbjct: 559 VGILSACSHVGLIDQGLKLFKCMVQAY-NIEPLAEHYACMVDLLGRAGRLEEAFQLVRGM 617
Query: 239 S-RINIVTWGALISGFAQNG---LAGSTLELLMEMQSCGFEPDSVS 280
N WGAL+ +G LA E L+E FEP S
Sbjct: 618 KINANAGIWGALLGACRIHGNLELAKFAAEKLLE-----FEPHKTS 658
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 165/341 (48%), Gaps = 24/341 (7%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+SM++ + K G++++A F+ M ++++V W+SMI + N + EA + +M +
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLY 109
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+ +M+ +L +R ++ Y + ++V YAK D A +
Sbjct: 110 S-WTLMITCYTRNGELAKARNLFNLLPYK------WNPVCCNAMVAGYAKNRQFDEARRL 162
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F M ++V+W ++++G+ +NG L+ EM E D VS + ++G L
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA----ERDVVSWNLMVDGFVEVGDL 218
Query: 295 KLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
S + + + N V +++ +++ G + AR LFDQM R++++WN +IA+Y
Sbjct: 219 ---NSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYV 275
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+ H +EA+SLF++M E + ++ ++++ G ++E R + M + T
Sbjct: 276 QNCHVDEAISLFMEMPEK----NSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQT- 330
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
M+ + +++A +I + +S + W +++G
Sbjct: 331 ----AMISGYVQNKRMDDARQIFNQISIR-DVVCWNTMIAG 366
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 47/301 (15%)
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG + RH NL + T L K+G +D A VF++M+ N VT ++IS FA+NG
Sbjct: 11 HGSYVFRH-NLKI---TQL----GKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRI 62
Query: 260 GSTLELL-----------MEMQSCGFEPDSVSLVSALLACAQIGFL-------------- 294
+L M + D V L L
Sbjct: 63 SDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNG 122
Query: 295 KLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+L K+ + + + + +N V +++ Y+K AR LFD M ++DL+SWN ++ Y
Sbjct: 123 ELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYT 182
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+G + L LQ E M + D ++ ++ G + +F+ + + P
Sbjct: 183 RNGE----MRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPN-----PNT 233
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CHNHKKFSIGEKVAK 470
+ M+ AR G++ EA ++ D M + W A+++ CH + S+ ++ +
Sbjct: 234 VSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHVDEAISLFMEMPE 292
Query: 471 K 471
K
Sbjct: 293 K 293
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 292/542 (53%), Gaps = 44/542 (8%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+II YS P E + L + M++ D T ++ LKAC + +K G +I
Sbjct: 95 WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLK 154
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING-----------L 152
+L +G+D+F+ + +++ YVKCG + A F++M ++D V ++SMI+G +
Sbjct: 155 KLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARV 214
Query: 153 VFNGQPREA---------VDAYKRMKKEGI-----------DADEVVMMGLIQACADLG- 191
VF+ P E + Y + ++GI + D + +I C G
Sbjct: 215 VFDCIPLEERNLISWNSLIRGYAQ-SEDGILVAWQLFAKMPERDLISWNSMIDGCVKCGR 273
Query: 192 -DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ GL R N D+ +++D YAK G +D+A +F M ++V + A++
Sbjct: 274 MEDAQGL------FDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMM 327
Query: 251 SGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
G+ QNG L + MQS G F D+ +L+ AL A AQ+G + G +IH + +
Sbjct: 328 GGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRF-IEEIG 386
Query: 310 FNL--VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F+L LG ++IDMYSKCG A +F+ ++ + + WN II IHG GE A +
Sbjct: 387 FSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLM 446
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M V+PD TF LL+A H+GLV+EG F+LM +K++P +HY CMVD+L RA
Sbjct: 447 EMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRA 506
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G +EEA V+ M EP +W +LLS C H+ F++G+ VA+ +++L+ + L S
Sbjct: 507 GHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLAS 566
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N +A KW +V VR M++ +KK+PG S +E+ G ++AF ++DKSH Q+ I +L
Sbjct: 567 NMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILD 626
Query: 548 KL 549
L
Sbjct: 627 SL 628
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 191/415 (46%), Gaps = 47/415 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y +V A ++F+ +P R +YNS+I Y K ++ + I + R
Sbjct: 168 LISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYV-KGGRIDLARVVFDCIPLEERNL 226
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S ++ S + + +++ K E D+ +SM++ VKCG+M +A F+
Sbjct: 227 ISWNSLIRGYAQSEDGILVAWQLFAKMPE----RDLISWNSMIDGCVKCGRMEDAQGLFD 282
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ---------- 185
+M +D+V W++MI+G NG+ A + M + + A +M G +Q
Sbjct: 283 RMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGI 342
Query: 186 ----------------------ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
A A LG G+++H + +LD ++ +L+DMY+
Sbjct: 343 FYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYS 402
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G ++ A VF+N+ ++ W A+I G A +GL + LMEM+ EPD ++ +
Sbjct: 403 KCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIG 462
Query: 284 ALLACAQIGFLKLGKSIHGYT--VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQM--Q 339
L AC G +K G V + + L ++D+ + G A+ ++M +
Sbjct: 463 LLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFE 522
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS-LLSALSHSGL 393
D+I W ++++ H E+ ++ + E +++ D + +S +L++ ++GL
Sbjct: 523 PNDVI-WRSLLSACKTH----ESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGL 572
>gi|414589059|tpg|DAA39630.1| TPA: hypothetical protein ZEAMMB73_362613 [Zea mays]
Length = 692
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/567 (32%), Positives = 301/567 (53%), Gaps = 38/567 (6%)
Query: 42 DTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+ YN +I P L Y++MI +D V PD+ T+ L+AC +L +G +
Sbjct: 124 EPYNVLISNCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHV 183
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+AV+ G +F ++++++Y KC + A F+ M+ +D+V W+SMI+G +GQ R+
Sbjct: 184 RAVDAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRK 243
Query: 161 AVDAYKRMKKEGIDADEVV----------------MMGLIQ------------------- 185
AV+ + RM+ EG + + V +GLI+
Sbjct: 244 AVELFLRMQAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSN 303
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
AC+ G R G +HG ++R + V +++ MYA+ ++ A +FK + +V
Sbjct: 304 ACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMERALMLFKMIRCPGLVA 363
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
W I+GFA A + L EM CG +P+ V++V+ L CA++ L+ G+ +H +
Sbjct: 364 WNTTIAGFALLDDAEAASRLFREMVVCGDVQPNYVTVVTYLALCARVANLQHGRELHTHI 423
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
V++ F +L S+IDMYSK G S A+ +FD M D+IS+ +IA YG+ G G +L
Sbjct: 424 VKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISFTSMIAGYGMQGKGIISL 483
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
F QMI++ + PD ++LSA SHSGLV EG FD MV Y I+P +HY+CMVDL
Sbjct: 484 RFFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVKSYGIKPQMEHYSCMVDL 543
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
ARAG +E+A ++++ P + AL+ CH IGE+ A+++L++ ++ G
Sbjct: 544 YARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTENAGHF 603
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
L++N +A W E+A VRK MR G+ K PG + ++ F++ D+S+ +I
Sbjct: 604 VLIANMYAAAGCWNELATVRKLMRDLGVMKAPGLAWADLGNGFTPFLVGDRSNPLAPEIY 663
Query: 544 YVLKKLYLEMRAISSWLQGHMEEHEEH 570
VL +L +M +++ + EEH
Sbjct: 664 EVLDELTEQMSNMNNCSDPDILSMEEH 690
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D R GL +HG S+ L+ + L+ Y+ L A+ S + LIS
Sbjct: 73 DLRIGLQLHGLSLSLGLSCYSHLLPRLLSFYSHHPSLLPAASSLAAGSTCP-EPYNVLIS 131
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+GL L EM PD+ + L ACA+ G L LG+++H V D
Sbjct: 132 NCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVRAVDAGMD 191
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L +++ MY+KC + AR +FD M+ RD++SWN +I+ Y G +A+ LFL+M
Sbjct: 192 GHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAVELFLRM 251
Query: 370 -------------------------------IETMVKPDHST-FASLL---SALSHSGLV 394
I MV+ S F +L+ +A S +G +
Sbjct: 252 QAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWL 311
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G+ L V + + + ++ + AR ++E AL + M PGL W ++
Sbjct: 312 RLGKEIHGLAV-RMQCHEIDSVINAVITMYARCNDMERALMLF-KMIRCPGLVAWNTTIA 369
Query: 455 G 455
G
Sbjct: 370 G 370
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K Y +I +Y + A+ +F+ + + ++ S+I Y +
Sbjct: 423 IVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISFTSMIAGYGMQGKGIIS 482
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLN 119
L + QMI + PD+ L AC + GEE++ K V+ G + S M++
Sbjct: 483 LRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVKSYGIKPQMEHYSCMVD 542
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV 153
LY + G + +A E + + S+M+ LV
Sbjct: 543 LYARAGLLEKAE---ELLNQTPFPPTSTMVAALV 573
>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
Length = 564
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 260/449 (57%), Gaps = 3/449 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ Y + A ++F+E+P R V +N+++ R + + L+ +M+ E V
Sbjct: 106 GSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVA 165
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D+ T + L CV L D + + AV+ G ++FV ++++++Y K G + EA
Sbjct: 166 GDAVTLSSVLPMCVLLGDRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWV 225
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M +DLV W+S+I+ G+ AV+ + M K G+ D + ++ L A A GD
Sbjct: 226 FGGMALRDLVTWNSIISAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDE 285
Query: 194 RFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R SVH Y RR ++ D+ ++VDMYAK +D A VF N+ ++V+W LI+G
Sbjct: 286 RGAKSVHCYVRRRGWDVGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITG 345
Query: 253 FAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
+ QNGL+ + + +MQ+ G +P + VS L A + +G L+ G +H +++ +
Sbjct: 346 YMQNGLSNEAVRIYNDMQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNL 405
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + T +ID+Y+KCG A LF+ M R WN IIA G+HGHG +AL+LF QM
Sbjct: 406 DVYVSTCLIDLYAKCGKLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQ 465
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ +KPD+ TF SLL+A SH+GLV++GR +FDLM + Y I P KHYACMVD+L RAG++
Sbjct: 466 QEGIKPDNVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYACMVDMLGRAGQL 525
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+EA + + M +P AVW ALL C H
Sbjct: 526 DEAFEFIQGMPIKPDSAVWGALLGACRIH 554
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 231/427 (54%), Gaps = 21/427 (4%)
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEA 130
+RPDS TF ++A + A+ LG + +VF S+++ Y++ G++ EA
Sbjct: 65 LRPDSFTFPPLVRAAPGPAS---AAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M +D+ W++M++GL N + +AV + RM EG+ D V + ++ C L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLL 181
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
GD L +H Y+++R L+ ++ V +L+D+Y K G L A VF M+ ++VTW ++I
Sbjct: 182 GDRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSII 241
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
S + Q G + +EL M G PD ++LVS A AQ G + KS+H Y RR +D
Sbjct: 242 SAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWD 301
Query: 310 F-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ G +V+DMY+K A+ +FD + RD++SWN +I Y +G EA+ ++
Sbjct: 302 VGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYND 361
Query: 369 MIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M +KP TF S+L A S+ G +++G L + K + C++DL A+
Sbjct: 362 MQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHALSI-KTGLNLDVYVSTCLIDLYAKC 420
Query: 428 GEVEEALKIVDSM---STEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVLKLNPDDL 480
G++ EA+ + + M ST P W A+++G H K ++ ++ ++ +K PD++
Sbjct: 421 GKLVEAMLLFEHMPRRSTGP----WNAIIAGLGVHGHGAKALNLFSQMQQEGIK--PDNV 474
Query: 481 GIHALVS 487
+L++
Sbjct: 475 TFVSLLA 481
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 192/377 (50%), Gaps = 27/377 (7%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K LS +I +YG +V AR +F + LR + T+NSII AY + +
Sbjct: 195 VKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISAYEQGGKVAAAV 254
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE-----IWRKAVELGYGNDVFVGSS 116
L++ M+K V PD T V+L + V+ + G + + R+ ++G D+ G++
Sbjct: 255 ELFHGMMKSGVSPDVLTL-VSLASAVAQCGDERGAKSVHCYVRRRGWDVG---DIIAGNA 310
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDA 175
++++Y K K++ A + F+ + +D+V W+++I G + NG EAV Y M+ EG+
Sbjct: 311 VVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLKP 370
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
+ + ++ A ++LG + G+ +H SI+ LNLDV V T L+D+YAK G L A +F
Sbjct: 371 IQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCGKLVEAMLLF 430
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
++M R + W A+I+G +G L L +MQ G +PD+V+ VS L AC+ G +
Sbjct: 431 EHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLLAACSHAGLVD 490
Query: 296 LGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARA-----LFDQMQS----RDLIS 345
G+S FD V G I + C V RA F+ +Q D
Sbjct: 491 QGRSF-------FDLMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAV 543
Query: 346 WNVIIASYGIHGHGEEA 362
W ++ + IHG+ E A
Sbjct: 544 WGALLGACRIHGNVELA 560
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 300/544 (55%), Gaps = 7/544 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG D+ A +F+ + V ++ II AY++ EVL L ++M + V+PD
Sbjct: 158 VVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPD 217
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TFT L AC ++ L+ + + + G D VG++++NLY KCG + EA F
Sbjct: 218 GYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVF 277
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ KD+V WSSMI +GQ + A+ M EG+ + V + +++A L +
Sbjct: 278 VQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQ 337
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +H ++ + DV + ++LV MY G ++ A +F++ ++V+W ++I+G++
Sbjct: 338 YGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYS 397
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNL 312
QN L L EM+ G +P+SV+ VSA+ ACA +G L+ G +H VR D ++
Sbjct: 398 QNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLH-ERVRCLGLDKDV 456
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T+++++Y KCG A A+F M+ ++L++W I +YG +GHG +L L M
Sbjct: 457 PVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQ 516
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD F ++L + +++G + +G ++++LM + I P +H CMVD+L RAG++E
Sbjct: 517 GMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEA 576
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +++++M E LA W+ LL+ C H + + A+K+ +L P + + L+S+ F
Sbjct: 577 AEQLINTMKFESSLA-WMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCA 635
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK--SHNQYEDIVYVLKKLY 550
WE R+ M G++++ G S +E+ +H F+ H+ +I L+KL
Sbjct: 636 AGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLG 695
Query: 551 LEMR 554
EM+
Sbjct: 696 REMQ 699
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 223/457 (48%), Gaps = 7/457 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFT-VALKACV 87
A +F+ + + V + S+I A++ + + L+ +M+ V PD TFT + LK
Sbjct: 69 ALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSG 128
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+L G+ + ++ GY D V + ++ +Y KCG + +A F+ +Q ++ W+
Sbjct: 129 RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTI 188
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I NG E + RM + G+ D ++ AC +G +H +I
Sbjct: 189 IIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISST 248
Query: 208 -LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
L+ D V T+L+++Y K G L+ A VF + +IV+W ++I+ FAQ+G A S ++LL
Sbjct: 249 GLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLL 308
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
M M G P++V+ V+ L A + + GK IH V+ + ++ L ++++ MY
Sbjct: 309 MLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNW 368
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G AR++F+ + RD++SW+ +IA Y + ALSLF +M V+P+ TF S +
Sbjct: 369 GWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAI 428
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
A + G + G + V + +V+L + G +EEA + M +
Sbjct: 429 DACAGVGALRRGTQLHE-RVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-KKN 486
Query: 446 LAVW--VALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
L W +A+ G + H S+ ++ + PD +
Sbjct: 487 LLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGI 523
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 196/403 (48%), Gaps = 22/403 (5%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML-----NLY 121
M +++ + S L AC L L G+ + + D S+L +Y
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
++CG + A+ F++M+ +++V W+S+I+ F G +A+ +++M G+ D +
Sbjct: 61 LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120
Query: 182 GLIQACADLGDSRF---GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ + G R G VH + ++ D V +V+MY K G ++ A +VF ++
Sbjct: 121 SILLKWS--GRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI 178
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+ +W +I+ +AQNG L LL M G +PD + + L AC +G L+ K
Sbjct: 179 QDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAK 238
Query: 299 SIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+H T+ D + +GT++I++Y KCG A +F Q+ ++D++SW+ +IA++
Sbjct: 239 ILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQS 298
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G + A+ L + M V+P++ TF ++L A++ + G+ + +Q
Sbjct: 299 GQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKE-----IHARIVQAGYSD 353
Query: 417 YACMVDLLARA----GEVEEALKIVDSMSTEPGLAVWVALLSG 455
C+ L + G VE A I +S S E + W ++++G
Sbjct: 354 DVCLTSALVKMYCNWGWVETARSIFES-SRERDVVSWSSMIAG 395
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 277/484 (57%), Gaps = 9/484 (1%)
Query: 66 QMIKEDVRPDSSTFTVA---LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
++I++ + ++ + LK C L L G+ I + + +D+ + +++LNLY
Sbjct: 2 ELIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA 61
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG + A F++M +D+V W+++I G + +P++A+ M + G+ ++ +
Sbjct: 62 KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121
Query: 183 LIQACADLG--DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L++A + +G D G +HG +R + +V V +++DMYA+ HL+ A +F M
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N V+W ALI+G+A+ G L M +P + S L ACA +G L+ GK +
Sbjct: 182 KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWV 241
Query: 301 HGYTVRRFDFNLV--LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H ++ + LV +G +++DMY+K G A+ +FD++ RD++SWN ++ Y HG
Sbjct: 242 HALMIK-WGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGL 300
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G+ AL F +M+ T + P+ TF +L+A SH+GL++EGR++FD+M KY ++P HY
Sbjct: 301 GKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYV 359
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
MVDLL RAG ++ A++ + M +P AVW ALL C HK +G A+ + +L+
Sbjct: 360 TMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSH 419
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
G H L+ N +A+ +W + A VRK M++SG+KK P S VE+ E+H F+ +D +H Q
Sbjct: 420 YPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQ 479
Query: 539 YEDI 542
+I
Sbjct: 480 RREI 483
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 154/285 (54%), Gaps = 2/285 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY D+V ARKLF+E+ R V T+ ++I YS+ + P + L L +M++ ++P+
Sbjct: 56 LLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPN 115
Query: 76 SSTFTVALKAC--VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
T LKA V D+ G ++ + GY ++V+V ++L++Y +C + EA +
Sbjct: 116 QFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLI 175
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M K+ V W+++I G GQ +A + M +E + ++ ACA +G
Sbjct: 176 FDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSL 235
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH I+ L V +L+DMYAK+G ++ A VF +++ ++V+W ++++G+
Sbjct: 236 EQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGY 295
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+Q+GL L+ EM P+ ++ + L AC+ G L G+
Sbjct: 296 SQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 141/268 (52%), Gaps = 13/268 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + + A+ +F+ + + ++N++I Y+RK + L++ M++E+V+P
Sbjct: 159 ILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPT 218
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV--FVGSSMLNLYVKCGKMNEAMVA 133
T++ L AC S+ L+ G+ W A+ + +G + FVG+++L++Y K G + +A
Sbjct: 219 HFTYSSVLCACASMGSLEQGK--WVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKV 276
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+++ ++D+V W+SM+ G +G + A+ ++ M + I +++ + ++ AC+ G
Sbjct: 277 FDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLL 336
Query: 194 RFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G H + + + N++ ++ ++VD+ + GHLD A M + WGAL+
Sbjct: 337 DEGR--HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+ +EL C FE DS
Sbjct: 395 GACRMH----KNMELGGYAAECIFELDS 418
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 297/540 (55%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ +P R T+ ++I Y+ + E ++ M +E+ +
Sbjct: 152 LLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVN 211
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
FT L A + G++I AV+ G + + ++++ +Y KCG +++++ FE
Sbjct: 212 EFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFE 271
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ + WS+MI G +G +A+ + RM GI+ E ++G++ AC+D
Sbjct: 272 MSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEE 331
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y ++ + + T+LVDMYAK+G + A F + + ++V W ++I+G+ Q
Sbjct: 332 GKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQ 391
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG L L MQ G P+ +++ S L AC+ + G+ IH T++ + +
Sbjct: 392 NGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTI 451
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G+++ MY+KCG +F +M RD+ISWN +I+ +G+G+EAL LF +M +
Sbjct: 452 GSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDT 511
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD TF ++LSA SH GLV+ G +F +M ++ + P +HYACMVD+L+RAG++ EA
Sbjct: 512 KPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAK 571
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++S + + GL +W LL C N++ + +G +K+++L + + L+S +
Sbjct: 572 EFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALG 631
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ E+V VR M+ G+ K PG S +E+ +H F++ D+ H +I + +L +M+
Sbjct: 632 RPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMK 691
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 252/475 (53%), Gaps = 17/475 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKE---SPFEVLGLYNQMIKEDV 72
+I Y + A+ +F+ + + V ++N +I YS++ S F V+ L+ +M +++
Sbjct: 49 LINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSF-VMELFQRMRADNI 107
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P++ TF+ A +L + G++ A+++ DVFVGSS+LN+Y K G + EA
Sbjct: 108 LPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEARE 167
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA--DL 190
F++M ++ V W++MI+G EA + ++ M++E D +E ++ A A +
Sbjct: 168 VFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEF 227
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
DS G +H +++ L + + + +LV MYAK G LD + VF+ + N +TW A+I
Sbjct: 228 VDS--GKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMI 285
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
+G+AQ+G + L+L M G P +LV L AC+ ++ GK +H Y ++ F+
Sbjct: 286 TGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFE 345
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
L + T+++DMY+K GV AR F+ +Q DL+ W +IA Y +G E+ALSL+ +M
Sbjct: 346 SQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRM 405
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ P+ T AS+L A S+ ++GR + KY + + + + A+ G
Sbjct: 406 QMEGILPNELTMASVLKACSNLAAFDQGRQIHARTI-KYGLGLEVTIGSALSTMYAKCGN 464
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVLKLNPDDL 480
+EE IV E + W A++SG + + + E++ ++ K PDD+
Sbjct: 465 LEEG-NIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTK--PDDV 516
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 167/296 (56%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+KT L + + + ++ +Y + + ++FE + T++++I Y++ + L
Sbjct: 239 VKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKAL 298
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+++M + P T L AC ++ G+++ ++LG+ + +++ ++++++Y
Sbjct: 299 KLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMY 358
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G +A F +Q+ DLV W+SMI G V NG+ +A+ Y RM+ EGI +E+ M
Sbjct: 359 AKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMA 418
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+++AC++L G +H +I+ L L+V + ++L MYAK G+L+ + VF+ M
Sbjct: 419 SVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER 478
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+I++W A+ISG +QNG LEL EM+ +PD V+ V+ L AC+ +G + G
Sbjct: 479 DIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG 534
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 186/368 (50%), Gaps = 6/368 (1%)
Query: 92 LKMGEEIWRKAVELGYGND-VFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
L+ G + + ++L + +++ +S++N Y KC + +A + F+++ KD++ W+ +IN
Sbjct: 23 LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLIN 82
Query: 151 GLVFNGQPREA--VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
G G + ++ ++RM+ + I + G+ A ++L FG H +I+
Sbjct: 83 GYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMAC 142
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
DV V +SL++MY K G L A VF M N VTW +ISG+A LAG E+
Sbjct: 143 FYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFEL 202
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ + + + S L A A F+ GK IH V+ L + +++ MY+KCG
Sbjct: 203 MRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGS 262
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ +F+ ++ I+W+ +I Y G +AL LF +M + P T +L+A
Sbjct: 263 LDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNA 322
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
S + VEEG+ + ++ K + +VD+ A++G E+A K + + +P L
Sbjct: 323 CSDACAVEEGKQVHNYLL-KLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQ-QPDLV 380
Query: 448 VWVALLSG 455
+W ++++G
Sbjct: 381 LWTSMIAG 388
>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
Length = 604
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 260/467 (55%), Gaps = 6/467 (1%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
++R F+ + + V +N++I +Y++ + L L++QM E V+PD+ TF + AC
Sbjct: 138 ASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSLEGVKPDARTFVSVIGACS 197
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWS 146
SL L+ G + +A +G +++L+LY KCG + A F+K++ RK++V W+
Sbjct: 198 SLQALEKGRAVEEQATSMGIEEGR---TALLSLYAKCGNLEAARDIFDKLKYRKNVVSWN 254
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
SMI +G+ REA++ Y+ MK+EG+ D++ G + AC G S G+ +H
Sbjct: 255 SMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITES 314
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ DV + T++V+MYAK G L+ A F+ M R N VTW A++ F Q+G L+L
Sbjct: 315 KIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLY 374
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG--YTVRRFDFNLVLGTSVIDMYSK 324
+ M S GF+P ++L AL AC++IG L+ GK+IH L L S+++MY+K
Sbjct: 375 LRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAK 434
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG + A +F +Q RD SWN II + HG +E LSL +M++ V PD+ TFA +
Sbjct: 435 CGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACV 494
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L A SH+GL++ GR F M ++ + +HY CMVDLL+RAG VE A ++V SM EP
Sbjct: 495 LLACSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEP 554
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
W LL G + A+ L P + L+ N ++
Sbjct: 555 PAMGWTTLLGSSEVQADLDRGSRYAEVAAGLEPGSSSSYVLLWNIYS 601
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 214/429 (49%), Gaps = 63/429 (14%)
Query: 43 TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA 102
++NS+++AYS+ E+L L+ +M DV PDS T+ L AC ++ L++G+E+ +
Sbjct: 6 SWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMELLELGKEVHARV 62
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAV 162
+ +D + ++++N+Y KCG + A F+ +Q D W++MI+GLV +G+ REA+
Sbjct: 63 SRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREAL 122
Query: 163 DAYKRMKK-------------------------------------------------EGI 173
++RMK EG+
Sbjct: 123 GLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSLEGV 182
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D + +I AC+ L G +V + + + +T+L+ +YAK G+L+ A
Sbjct: 183 KPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIE---EGRTALLSLYAKCGNLEAARD 239
Query: 234 VFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
+F + R N+V+W ++I+ +AQ+G LEL M+ G +PD ++ AL AC G
Sbjct: 240 IFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYG 299
Query: 293 FLKLGKSIHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G IH T + ++ L T++++MY+KCG A + F++M+ ++ ++W+ ++
Sbjct: 300 GSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVG 359
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
++ HG+ EAL L+L+M+ +P T A L+A S G ++EG+ +IQ
Sbjct: 360 AFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGK------AIHSRIQ 413
Query: 412 PTEKHYACM 420
TE C+
Sbjct: 414 ATETLQNCL 422
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 59/371 (15%)
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
KDL+ W+SM+ +G E ++ +++M ++ D + ++ AC+ + G V
Sbjct: 2 KDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSAMELLELGKEV 58
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV------------------------- 234
H R D + +L++MY+K G L+ A V
Sbjct: 59 HARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRA 118
Query: 235 ------------------------FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
F M + ++ W A+IS +AQ+G A +L L +M
Sbjct: 119 REALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMS 178
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG-TSVIDMYSKCGVPS 329
G +PD+ + VS + AC+ + L+ G+++ + G T+++ +Y+KCG
Sbjct: 179 LEGVKPDARTFVSVIGACSSLQALEKGRAVEEQAT---SMGIEEGRTALLSLYAKCGNLE 235
Query: 330 CARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSAL 388
AR +FD+++ R +++SWN +IA+Y G G EAL L+ M E V+PD T+A L A
Sbjct: 236 AARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGAC 295
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
+ G +G +++ KI+ +V++ A+ GE+E A+ + M + +
Sbjct: 296 TSYGGSAKG-VEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAV-T 353
Query: 449 WVALLSGCHNH 459
W A++ H
Sbjct: 354 WSAMVGAFIQH 364
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 17/160 (10%)
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
+DLISWN ++ +Y HGHGEE L LF +M V+PD T+AS+L A S L+E G+
Sbjct: 2 KDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSAMELLELGKE- 57
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM-STEPGLAVWVALLSGC--H 457
VS+ + + A ++++ ++ G +E A ++ D + S +P + W A++SG H
Sbjct: 58 VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDP--SPWNAMISGLVQH 115
Query: 458 NHKKFSIG--EKVAKKVLKLNPDDLGIHALVSNFFAMEQK 495
+ ++G E++ + ++++ A SNF ME+K
Sbjct: 116 GRAREALGLFERMKAESVRIDK------ASRSNFDRMEKK 149
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +F L R ++N+II+ ++ EVL L+ +M+++ V PD
Sbjct: 428 LLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPD 487
Query: 76 SSTFTVALKACVSLMDLKMGEE-IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
TF L AC L G +E G +D M++L + G++ A
Sbjct: 488 YVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLLSRAGRVESA 543
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 275/514 (53%), Gaps = 8/514 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + +A ++F + V Y S++ A R + + QM ++ ++P+
Sbjct: 177 LIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPN 236
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L C +GE+I +++ V+ +++++ Y + G A FE
Sbjct: 237 EHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFE 292
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ K++V W SM+ + +G+ +A+ + M EG+ +E + AC G
Sbjct: 293 NLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCL 349
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H +I+R L D++V +L+ MY ++G + V + ++V+W A IS Q
Sbjct: 350 GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQ 409
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG + + LL++M S GF P+ + S L +CA + L G+ +H ++ DF +
Sbjct: 410 NGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCT 469
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG AR FD M + D++SWN +I HG AL F +M +
Sbjct: 470 GNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDW 529
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+PD STF S+L +H+GLV+EG +F M +Y + PT HYACM+D+L R G EAL
Sbjct: 530 RPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEAL 589
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+++++M EP + +W LL+ C H+ IG+ A K+++L+ D + L+SN +AM +
Sbjct: 590 RMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHE 649
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHA 528
+W + VR+ M + G+KK G+S +EV E+ A
Sbjct: 650 EWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVEA 683
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 226/457 (49%), Gaps = 18/457 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+ +P + V + + I +R P ++ M++ V P+ AL AC +
Sbjct: 89 ALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAA 148
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +GE++ AV G+ D ++GS ++ LY +CG + A F +M+ D+V ++S+
Sbjct: 149 AGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSL 208
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++ L NG+ AVD +M ++G+ +E M ++ C G +HGY ++
Sbjct: 209 VSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHGYMLKVMG 264
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ V T+L+D Y++ G A VF+N+ N+V+W +++ ++G L + E
Sbjct: 265 SQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSE 324
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M S G +P+ + AL AC G + LG+ IH ++R ++ + +++ MY + G
Sbjct: 325 MISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGF 381
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S A+ ++++ DL+SW I++ +G E+A++L LQM P+ F+S LS+
Sbjct: 382 VSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSS 441
Query: 388 LSHSGLVEEGRYWFDLMV---SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
+ L+ +GR L + +K+ ++++ ++ G + A D M T
Sbjct: 442 CADLALLHQGRQLHCLALKLGCDFKVCTGNA----LINMYSKCGRIGSARLAFDVMDTHD 497
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDD 479
++ W +L+ G H ++ + ++ + PDD
Sbjct: 498 VMS-WNSLIHGLAQHGDANLALETFSEMCSSDWRPDD 533
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 173/347 (49%), Gaps = 10/347 (2%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
DV + L+ +K G++ +A+ F++M RK++V W++ I+G NG+P A + M
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G+ ++ + ACA G G VH ++R D + + L+++Y++ G L
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A VF+ M ++V + +L+S +NG +++L +M G +P+ ++ S L C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 290 QIGFLKLGKSIHGYTVRRFDFNLVLG-TSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ +G+ IHGY ++ V T++ID YS+ G A+ +F+ ++S++++SW
Sbjct: 249 R----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCS 304
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
++ G ++AL +F +MI V+P+ F+ LSA G V GR K
Sbjct: 305 MMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQ-IHCSAIKR 360
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + ++ + R+G V E L+ V P L W A +S
Sbjct: 361 DLMTDIRVSNALLSMYGRSGFVSE-LEAVLGKIENPDLVSWTAAISA 406
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 305/579 (52%), Gaps = 9/579 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y A +F +P R + ++NS++ Y + L ++ +M+ +
Sbjct: 302 LLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEIN 361
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT AL AC+ G+ + V LG +++ +G++++ Y KC KM EA F+
Sbjct: 362 YVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQ 421
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLGD-S 193
+M + D V W+++I G N + EAV A+K M++ D + ++ ++ +C D
Sbjct: 422 RMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLI 481
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
++G+ +H +++ +LD VQ+SL+ MYAK G L +S++F + W A+I+
Sbjct: 482 KYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAAN 541
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
A+ G L+L++ M+S G E D + +AL A + L+ G+ +HG T++ F+ +
Sbjct: 542 ARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDH 601
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ + +DMY KCG A + Q R +SWN +I+ HG +A F M++
Sbjct: 602 FIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKL 661
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKP+H +F LLSA SH GLV+EG ++ M S Y IQP +H CM+DLL R+G + E
Sbjct: 662 GVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVE 721
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + M P VW +LL+ C ++ +G K AK +L+L+P D + L SN FA
Sbjct: 722 AEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFAT 781
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI---VYVLKKL 549
+WE+V VR M ++K P +S V+ G + F M D++H Q E I + L K+
Sbjct: 782 IGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKI 841
Query: 550 YLEMRAI---SSWLQGHMEEHEEHDPLSTAAQYAPTYYL 585
E + S LQ EE +EH+ S + + A + L
Sbjct: 842 VGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGL 880
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 247/495 (49%), Gaps = 15/495 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L ++ +I ++GG DI A +F E+ R ++NSII A ++ E
Sbjct: 187 LKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESF 246
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ M + +T ++ L C S+ LK G+ + AV+ G +++ + +++L++Y
Sbjct: 247 RYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVY 306
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
G+ +A + F +M +DL+ W+SM+ V +G+ A+ + M + + V
Sbjct: 307 SDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFT 366
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+ AC D G +HG+ + L ++ + +L+ Y K + A VF+ M ++
Sbjct: 367 SALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKL 426
Query: 242 NIVTWGALISGFAQNG---LAGSTLELLMEMQSCGFEPDSVSLVSALLAC-AQIGFLKLG 297
+ VTW ALI GFA N A + +L+ E + G D +++V+ L +C +K G
Sbjct: 427 DKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYG 484
Query: 298 KSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
IH +T V FD + + +S+I MY+KCG + +FDQ+ + WN IIA+ +
Sbjct: 485 IPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARY 544
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G GEEAL L ++M ++ D F++ LS + ++EEG+ L S K+ H
Sbjct: 545 GFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ---QLHGSTIKLGFELDH 601
Query: 417 YA--CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ +D+ + GE+++AL+I+ + L+ W L+S H +F ++ +LK
Sbjct: 602 FIINAAMDMYGKCGELDDALRILPQPTDRSRLS-WNTLISISARHGQFHKAKETFHDMLK 660
Query: 475 L--NPDDLGIHALVS 487
L P+ + L+S
Sbjct: 661 LGVKPNHVSFVCLLS 675
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 234/464 (50%), Gaps = 10/464 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+ Y + +A+K+F E+P R V ++ S++++YS S EV+ Y +M E + +
Sbjct: 100 FVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCN 159
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ + + +C LMD+ +G ++ A++ G V +S++ ++ CG +NEA F
Sbjct: 160 ENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFN 219
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +D + W+S+I+ N E+ + M+ + + + L+ C + ++
Sbjct: 220 EMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKW 279
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VHG +++ L ++ + +L+ +Y+ G A +F+ M ++++W ++++ + Q
Sbjct: 280 GKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQ 339
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVL 314
+G L++ EM E + V+ SAL AC F GK +HG+ V L++
Sbjct: 340 DGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELII 399
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE-TM 373
G ++I Y KC + A+ +F +M D ++WN +I + + EA++ F M E +
Sbjct: 400 GNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGST 459
Query: 374 VKPDHSTFASLL-SALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
D+ T ++L S L+H L++ G +V+ + + + + ++ + A+ G++
Sbjct: 460 SGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQ--SSLITMYAKCGDLH 517
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
+ I D + + +VW A+++ + ++ GE+ K V+++
Sbjct: 518 SSSYIFDQLVFKTS-SVWNAIIAA---NARYGFGEEALKLVVRM 557
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 214/455 (47%), Gaps = 10/455 (2%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y I A+ +F+ + R ++N ++ Y R S E + + + ++P
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 79 FTVALKAC-VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
+ AC S + K G + A++ G DVFVG+S ++ Y G ++ A F +M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+++V W+S++ NG +E ++ YKRM+ EGI +E + +I +C L D G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
+ G++++ L V SL+ M+ G ++ A +F M+ + ++W ++IS AQN
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGT 316
L + M+ E + +L L C + +LK GK +HG V+ + N+ L
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+++ +YS G A +F +M RDLISWN ++A Y G AL +F +M+ +
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
++ TF S L+A G+ +V +Q ++ + ++ EA K+
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVV-LGLQDELIIGNTLITFYGKCHKMAEAKKV 419
Query: 437 VDSMSTEPGL--AVWVALLSGCHNHKKFSIGEKVA 469
M P L W AL+ G N+ + + E VA
Sbjct: 420 FQRM---PKLDKVTWNALIGGFANNAE--LNEAVA 449
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 287/539 (53%), Gaps = 6/539 (1%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I +Y + AR++F ++ + ++N++I +R L L+ +++ + PD
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 77 STFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L+AC SL + +G ++ A++ G D FV ++++++Y K GKM EA + F
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFH 458
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
DL W++M++G + REA+ + M + G AD++ +A L +
Sbjct: 459 NQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQ 518
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + D+ V + ++DMY K G + A VF + + V W +ISG +
Sbjct: 519 GKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVE 578
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG L +M+ G +PD + + + AC+ + L+ GK IH ++ F+ +
Sbjct: 579 NGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV 638
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
TS++DMY+KCG A LF +M +R + WN +I HG+ EEAL+ F +M V
Sbjct: 639 MTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGV 698
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD TF +LSA SHSGL + FD M Y ++P +HY+C+VD L+RAG ++EA
Sbjct: 699 TPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAE 758
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+V SM E ++ LL+ C GE+VA+K+ ++P D + L+SN +A
Sbjct: 759 KVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAAN 818
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKL 549
+WE R M++ +KK PG+S +++ ++H F+ D+SH + Y + YV+K++
Sbjct: 819 QWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRI 877
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 210/460 (45%), Gaps = 61/460 (13%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y I AR LF+ +P+R V +N ++ AY + EVLGL++ + +R
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLR 220
Query: 74 PDSSTFTVALKACVSLMDLKMG---EEIWRKAVE--LGYGNDVFVGSSMLNLYVKCGKMN 128
PD CVS+ + MG + ++ + +E Y +FV
Sbjct: 221 PD----------CVSVRTILMGVGKKTVFERELEQVRAYATKLFVCD------------- 257
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
D+ W+ ++ + G+ EAVD ++ M K + D + + ++ A
Sbjct: 258 ---------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HG +R + V V S ++MY K G ++ A +F M +++++W
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVRR 307
+ISG A++GL +L L +++ G PD ++ S L AC+ + +G+ +H ++
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKA 428
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+ + T++ID+YSK G A LF DL SWN ++ + + + EAL LF
Sbjct: 429 GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF 488
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEG----------RYWFDLMVSKYKIQPTEKH 416
M E K D TFA+ A +++G R+ +DL V
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV----------- 537
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+ ++D+ + GE++ A K+ + + + P W ++SGC
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQIPS-PDDVAWTTVISGC 576
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 202/460 (43%), Gaps = 59/460 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYS---------RKESPFEVLGLY 64
+I +Y + SARKLF+ P R + TYN+I+ AY+ + F + L
Sbjct: 54 LITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLL 113
Query: 65 NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC 124
Q + R T + K C+ E + AV++G DVFV +++N+Y K
Sbjct: 114 RQSVMLTTR---HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKF 170
Query: 125 GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV----VM 180
++ EA V F++M +D+V W+ M+ V G E + + + G+ D V ++
Sbjct: 171 QRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
MG+ + R L V Y A+ +F
Sbjct: 231 MGVGKKTV---------------FERELE--------QVRAY--------ATKLFVCDDD 259
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++ W +S + Q G ++ +M DS++ + L A + L+LGK I
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG VR +D + + S I+MY K G + AR +F QM+ DLISWN +I+ G
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE----GRYWFDLMVSKYKIQPTEK 415
E +L LF+ ++ + + PD T S+L A S +EE GR + K I
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCAL-KAGIVLDSF 435
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ ++ G++EEA +++ LA W A++ G
Sbjct: 436 VSTALIDVYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHG 474
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 11/229 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y ++ SARK+F ++P + ++I + L Y+QM V+PD
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +KAC L L+ G++I ++L D FV +S++++Y KCG + +A F
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M + + W++MI GL +G EA++ + MK G+ D V +G++ AC S
Sbjct: 661 RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSAC-----SHS 715
Query: 196 GLSVHGY----SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNM 238
GL+ Y S+++ ++ +++ + LVD ++ GH+ A V +M
Sbjct: 716 GLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 177/433 (40%), Gaps = 56/433 (12%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE--KMQRK 140
L+ ++ DL +G+ V G D +V ++++ +Y KCG + A F+ +
Sbjct: 20 LRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDR 79
Query: 141 DLVCWSSMINGLVFNGQ------PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
DLV +++++ G+ EA ++ +++ + + L + C G
Sbjct: 80 DLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPS 139
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
++ GY+++ L DV V +LV++YAK + A +F M ++V W ++ +
Sbjct: 140 ASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYV 199
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA-QIGFLKLGKSIHGYTVRRFDFNLV 313
+ G L L G PD VS+ + L+ + F + + + Y + F
Sbjct: 200 EMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLF----- 254
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
V D D+ WN ++SY G G EA+ F MI++
Sbjct: 255 ----VCD------------------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSR 292
Query: 374 VKPDHSTFASLLSALSHSGLVEEG--------RYWFDLMVSKYKIQPTEKHYACMVDLLA 425
V D T+ +LS ++ +E G R+ +D VS +++
Sbjct: 293 VPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN---------SAINMYV 343
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIH 483
+AG V A ++ M E L W ++SGC ++ +L+ L PD I
Sbjct: 344 KAGSVNYARRMFGQMK-EVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTIT 402
Query: 484 ALVSNFFAMEQKW 496
+++ ++E+ +
Sbjct: 403 SVLRACSSLEESY 415
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 244/411 (59%), Gaps = 2/411 (0%)
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D + S+ G P A+ Y+ + + + +ACADL R G+ +H
Sbjct: 69 DSFLFCSLTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIH 128
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+++ L + VQTSLV +Y+K G LD+A +F + ++V W A+ISG+ QNGLAG
Sbjct: 129 AHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAG 188
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVI 319
+E+ EMQ G PDS + V+ L ACAQ G L LG+ + V R + N+VLG +++
Sbjct: 189 RAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALV 248
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
+MY++CG+ + AR F+ +Q R++++W +IA YG+HGHG EA+ LF M + P+
Sbjct: 249 NMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDV 308
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV-D 438
TF ++LSA +H+GLV EGR F M S Y + P +HY MVD+ RAG +++A++ + D
Sbjct: 309 TFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHD 368
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
S+ EPG VW A+L C HK F++G +VA++++ L P+ L+SN +A+ K
Sbjct: 369 SIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKMNH 428
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
V VR TM K +KK GYS++E+ G H F M +KSH + +I L+KL
Sbjct: 429 VEKVRDTMIKRRLKKPIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKL 479
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 175/360 (48%), Gaps = 23/360 (6%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+ S+ A +R+ P L Y ++ + S FT KAC L ++ G I AV
Sbjct: 73 FCSLTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIHAHAV 132
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
LG G++ FV +S++ LY KCG+++ A F+ ++ K +V W++MI+G NG A++
Sbjct: 133 LLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIE 192
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
Y+ M+ G D + + ACA G G V + + ++V + +LV+MYA
Sbjct: 193 VYREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYA 252
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
+ G ++ A F + N+VTW ++I+G+ +G G ++L M+ G P+ V+ V+
Sbjct: 253 RCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVA 312
Query: 284 ALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCA-RALF 335
L ACA G + G KS++G R + S++DMY + G+ A R +
Sbjct: 313 VLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHY-----CSMVDMYGRAGLLDDAMRFIH 367
Query: 336 DQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMIETMV-----KPDHSTFASLLSALS 389
D + W ++ + +H + +L +++ E ++ P H S L ALS
Sbjct: 368 DSIPGEPGPEVWTAMLGACKMH----KDFNLGVEVAERLIALEPESPSHRVLLSNLYALS 423
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARKLF+ + + V +N++I Y + + +Y +M PD
Sbjct: 146 LVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYREMQMAGEAPD 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+TF L AC L +G ++ + V +V +G++++N+Y +CG +N+A F
Sbjct: 206 SATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYARCGLVNKAREWFN 265
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q +++V W+SMI G +G EAV + M+++G ++V + ++ ACA G
Sbjct: 266 MLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLSACAHAGLVSE 325
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLD 229
G S++ L +V+ S+VDMY + G LD
Sbjct: 326 GRDAFA-SMKSVYGLVPRVEHYCSMVDMYGRAGLLD 360
>gi|115484703|ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|77549336|gb|ABA92133.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644717|dbj|BAF27858.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|125576589|gb|EAZ17811.1| hypothetical protein OsJ_33354 [Oryza sativa Japonica Group]
Length = 470
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 267/465 (57%), Gaps = 18/465 (3%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P + + L+ C + ++ GE+ +AV G+ D + + ++ +Y +CG+ A
Sbjct: 4 PVAGRLSGLLRRCAAAGAVRPGEQAHARAVVGGWLPDATLETDLVLMYCRCGERRRARRV 63
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M+ + + N L+ PR+A++ + R+ G+ D + +++ACA+L D+
Sbjct: 64 FDGMRAPSMHAY----NVLLAASPPRDAMEVFSRLLASGLRPDGYSVPAVVRACAELPDA 119
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG+++R L +V V +L+DMYAK G LD A VF M+ + V W +++G+
Sbjct: 120 VLGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTERDAVVWNCMVAGY 179
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA-------CAQIGFLKLGKSIHGYTVR 306
A+ G A T E+ Q ++V++V+ L A CA+ G L G+ IHG VR
Sbjct: 180 ARAGRAVETFEIFSRAQV-----EAVNMVNGLQAVPSVLNICAKEGELMKGREIHGRMVR 234
Query: 307 --RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
FD ++ +G ++I+MY+KCG + ++A+F MQ RD++SW+ +I SY IHG GE+AL
Sbjct: 235 CLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALK 294
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
++++M+ VKP+ TF S+LS+ SHSGLV EGR F+ M + + P +HYACMVDLL
Sbjct: 295 VYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLL 354
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG +EEA+ ++ M EP +VW ALLS C H +GE A ++ +L +
Sbjct: 355 GRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYV 414
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+ + + + VAG+R MR+ GM K PG S ++V G HAF
Sbjct: 415 TLCGIYDAVGQSDGVAGLRSRMRELGMVKTPGCSRIDVKGRAHAF 459
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 30/357 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ + + YN ++ A P + + ++++++ +RPD
Sbjct: 47 LVLMYCRCGERRRARRVFDGMRAPSMHAYNVLLAA----SPPRDAMEVFSRLLASGLRPD 102
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ ++AC L D +G I AV LG +V V +++L++Y K G +++A+ F+
Sbjct: 103 GYSVPAVVRACAELPDAVLGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFD 162
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA-------CA 188
+M +D V W+ M+ G G+ E + + R + E ++ M+ +QA CA
Sbjct: 163 EMTERDAVVWNCMVAGYARAGRAVETFEIFSRAQVEAVN-----MVNGLQAVPSVLNICA 217
Query: 189 DLGDSRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
G+ G +HG +R + D+ V +L++MYAK G ++++ VF M + ++V+W
Sbjct: 218 KEGELMKGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWS 277
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI------- 300
+I ++ +G L++ MEM S G +P+ ++ S L +C+ G + G+ I
Sbjct: 278 TMIHSYSIHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKV 337
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
HG + ++D+ + G A L +M S W ++++ +H
Sbjct: 338 HGVHPAAEHY-----ACMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMH 389
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A GN+ +I +Y + ++ +F + R V +++++I +YS + L +Y +M
Sbjct: 243 AVGNA---LINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEM 299
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGK 126
+ E V+P+ TFT L +C + G +I+ ++ G + M++L + G
Sbjct: 300 LSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGA 359
Query: 127 MNEAMVAFEKMQRKDLV-CWSSMINGLVF-NGQPREAVDAYKRMK-KEGIDADEVVMMGL 183
+ EA+ KM + W ++++ N + A++ + +EG ++ V + G+
Sbjct: 360 IEEAVGLIRKMPMEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGI 419
Query: 184 IQA 186
A
Sbjct: 420 YDA 422
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 293/525 (55%), Gaps = 16/525 (3%)
Query: 36 LPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS--STFTVALKACVSLMD 91
+PLR + YN I SR + P +L ++++ P++ S +A+ +C S+ +
Sbjct: 1 MPLRWNSSILYNFFI--QSRTQYPL-LLHRSFHLVRQCATPEAIVSALLIAVNSCPSISN 57
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+ EI + + D F+G ++ Y K G +A+ F+ M KDLV W+S+I+G
Sbjct: 58 CR---EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISG 114
Query: 152 LVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
F+ ++ A+ MK E + +EV ++ +I AC D+ G +HG+ I+ L
Sbjct: 115 --FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDA--GKYIHGFGIKVGGTL 170
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+VKV SL++MY K+G L A +F+ + N V+W ++I+ NG A ++ +M+
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPS 329
G E D ++++ L AC +G KL +SIHG F + + T+++D Y+K G S
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+ +F ++ D ++W ++A Y HG G EA+ LF M ++PDH TF LLSA S
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
HSGLV EG+ +F++M Y I+P HY+CMVDLL R G + +A +++ +M EP VW
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
ALL C H +G++VA+ ++ + P D + ++SN ++ + W++ A VR +++
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+K+ PGYS +E + H F + D+SH + E I L++L ++R
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIR 515
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 171/340 (50%), Gaps = 16/340 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A KLF+++P + + ++NS+I +SR + Y + V+P+ T + AC
Sbjct: 93 ALKLFDDMPHKDLVSWNSLISGFSRCLH-MSLTAFYTMKFEMSVKPNEVTILSMISACNG 151
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+D G+ I +++G +V V +S++N+Y K G + A FE + + V W+S+
Sbjct: 152 ALD--AGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I V NG RE +D + +M++ GI+ DE ++ L+QAC LG + S+HG
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGF 269
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ + T+L+D YAK G L + VF + + V W A+++G+A +GL ++L
Sbjct: 270 GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFES 329
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKS-------IHGYTVRRFDFNLVLGTSVIDM 321
M + G EPD V+ L AC+ G + GKS ++G R + + ++D+
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHY-----SCMVDL 384
Query: 322 YSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+CG+ + A + M + W ++ + +HG+ E
Sbjct: 385 LGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 15/284 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG D+ SA +LFE +P ++NSII A E + +N+M + + D
Sbjct: 178 LINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQD 237
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L+AC+ L K+ E I G+G + + +++L+ Y K G+++ + F
Sbjct: 238 EGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFT 297
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA-----DL 190
++ D V W++M+ G +G REA+ ++ M +G++ D V L+ AC+ +
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
G S F + Y I V + +VD+ + G L+ A V +NM N WGAL
Sbjct: 358 GKSYFNVMSEVYGIEPR----VDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGAL 413
Query: 250 ISGFAQNG---LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+ +G L E L+ M+ +P + ++S + + ++
Sbjct: 414 LGACRVHGNIELGKEVAEHLINMEP--LDPRNYIMLSNMYSASR 455
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 286/505 (56%), Gaps = 6/505 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
D RK+F+ L ++ V ++ S+I Y R P L L+ +M+ V P++ T + +
Sbjct: 109 TDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVI 168
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KAC L DLK+G + G+ ++ + S++++++ + +++A F+++ D +
Sbjct: 169 KACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAI 228
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
CW+S+I+ L N EA+ + M+++ G+ D ++ AC +LG + G VH
Sbjct: 229 CWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAK 288
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
I +V V++SLVDMY K G + + +F M N V+W AL+ G+ QNG S
Sbjct: 289 VITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSV 348
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDM 321
+++ +M+ + D + L CA + ++ GK +H +R+ + ++++ ++++D+
Sbjct: 349 IQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDL 404
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG A+ +FDQM R+LI+WN +I + +G GEEAL +F QM++ +KPD+ +F
Sbjct: 405 YAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISF 464
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+L A SH GLV+EGR +F M Y I+ +HY+CMVDLL RAG +EEA ++++
Sbjct: 465 IGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSD 524
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
++W ALL C + I E++AK+V++L PD + L++N + +W +
Sbjct: 525 FRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALR 584
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGEL 526
+R+ M+ G+ K+PG S +E L
Sbjct: 585 IRRLMKDRGVNKMPGKSWIETKNNL 609
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 200/411 (48%), Gaps = 31/411 (7%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK-MNEAMVAFEKMQRKD 141
L+ C ++ G +I ++ G D FVG+S+L LY K G E F+ + KD
Sbjct: 66 LQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKD 125
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
++ W+SMI+G V G+P +++ + +M G++ + + +I+AC++LGD + G HG
Sbjct: 126 VISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHG 185
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+ R + + + ++L+DM+ + LD A +F + + + W ++IS +N
Sbjct: 186 VVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDE 245
Query: 262 TLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L MQ G PD + + L AC +G LK GK +H + F N+V+ +S++
Sbjct: 246 ALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLV 305
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMY KCG ++ +FD+M ++ +SW+ ++ Y +G + + +F M K D
Sbjct: 306 DMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIF----RKMEKVDLY 361
Query: 380 TFASLLSALSHSGLVEEGRY----------WFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
F ++L + V +G+ W D++V + +VDL A+ G
Sbjct: 362 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-----------SALVDLYAKCGC 410
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
+E A I D M L W +++ G + + ++ +++K + PD
Sbjct: 411 IEYAQTIFDQMPVR-NLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPD 460
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 184/371 (49%), Gaps = 7/371 (1%)
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
S I L +G+ A+ K + I A V+ L+Q C + GL +H + I+
Sbjct: 29 SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 88
Query: 207 HLNLDVKVQTSLVDMYAKTG-HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L D V SL+ +Y K G VF + ++++W ++ISG+ + G ++LEL
Sbjct: 89 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 148
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSK 324
+M + G EP++ +L + + AC+++G LKLG+ HG + R FD N V+ +++IDM+ +
Sbjct: 149 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 208
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFAS 383
AR LFD++ D I W II++ + +EAL F M + PD TF +
Sbjct: 209 NCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGT 268
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L+A + G +++G+ +++ + +VD+ + G V E+ +I D M +
Sbjct: 269 VLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE-SSLVDMYGKCGSVGESQRIFDRMPIK 327
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
++ W ALL G + F ++ +K+ K++ G A ++ +EV
Sbjct: 328 NSVS-WSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHC-- 384
Query: 504 KTMRKSGMKKV 514
+ +RK G + V
Sbjct: 385 QYIRKGGWRDV 395
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 255/444 (57%), Gaps = 14/444 (3%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQ 185
++ A F+++ +L W+++I + P +++ + RM + D D+ LI+
Sbjct: 85 LDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIK 144
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
A ++L + G + HG I+ L DV + SL+ YAK G L L VF N R ++V+
Sbjct: 145 AASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVS 204
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++I+ F Q G LEL EM++ +P+ +++V L ACA+ + G+ +H Y
Sbjct: 205 WNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG---------- 354
R R +L L +++DMY+KCG A+ LFD+M +D++SW ++ Y
Sbjct: 265 RNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324
Query: 355 --IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+HGHG++A++LF +M E VKP+ TF ++L A SH GLVEEGR +F+ M Y + P
Sbjct: 325 LAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLP 384
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
KHYACMVD+L RAG +EEA+++++ M P +VW ALL C H+ + E+ ++
Sbjct: 385 GVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQL 444
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
++L P + G + L+SN +A KW+ V+G+RK MR G+KK PG S +EV+G +H F++
Sbjct: 445 IELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 504
Query: 533 DKSHNQYEDIVYVLKKLYLEMRAI 556
D SH + I L ++ + I
Sbjct: 505 DNSHPSAKKIYAKLDEIVARLETI 528
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 198/392 (50%), Gaps = 25/392 (6%)
Query: 1 MIKTNLSAYGNSVGRII--ALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M++T L S R+I A + A+++F+++P + T+N++I AY+ +P
Sbjct: 58 MLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPH 117
Query: 59 EVLGLYNQMIKEDVR-PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ L ++ +M+ + PD TF +KA L +L G+ +++ G+DVF+ +S+
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
++ Y KCG++ F R+D+V W+SMI V G P EA++ ++ M+ + + +
Sbjct: 178 IHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNG 237
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ M+G++ ACA D FG VH Y R + + + +++DMY K G ++ A +F
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDK 297
Query: 238 MSRINIVTWGALISGFAQ------------NGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
M +IV+W ++ G+A+ +G + L +MQ +P++V+ + L
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNIL 357
Query: 286 LACAQIGFLKLGKSIHGYTVRRFDFNLVLGTS----VIDMYSKCGVPSCARALFDQMQSR 341
AC+ +G ++ G++ + + ++ G ++D+ + G+ A L ++M
Sbjct: 358 CACSHVGLVEEGRTF--FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMA 415
Query: 342 DLIS-WNVIIASYGIHGH---GEEALSLFLQM 369
S W ++ + IH + E+A S +++
Sbjct: 416 PAASVWGALLGACTIHENVVLAEQACSQLIEL 447
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 290/545 (53%), Gaps = 11/545 (2%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
+A K+F+++P +N++ YS+ ES +V+ L+ QM DV P+ TF V LK+CV
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ LK GEE+ ++ G+ + FV ++++++Y G ++ A F +M ++++ W++
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MING + A + + I ++ G I+A D+ +R +
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEA-KDVIRAR-------ELFDKM 174
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
N DV ++++ YA G + +F+ M N+ +W ALI G+ +NG L
Sbjct: 175 PNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFK 234
Query: 268 EMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
M G P+ +LV+ L ACA++G L LGK +H Y + N+ + +++DMY+KC
Sbjct: 235 RMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKC 294
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
GV A +F M ++DLISWN II +HGHG +AL+LF M PD TF +L
Sbjct: 295 GVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGIL 354
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
A +H GLVE+G +F M Y I P +HY C+VDLL RAG + A+ + M E
Sbjct: 355 CACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEAD 414
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
+W ALL C +K + E +K+++ P + + ++SN + +W++VA ++
Sbjct: 415 AVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVA 474
Query: 506 MRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHME 565
MR +G KK+PG S++EVN L F D+ H + E I L+ L +R+ S ++ G ME
Sbjct: 475 MRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRS-SGYVPGLME 533
Query: 566 EHEEH 570
E +
Sbjct: 534 LDERN 538
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 21/268 (7%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y D+++ +LFEE+P R V ++N++I Y+R EVL + +M+ + V P+ +T
Sbjct: 189 YASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDAT 248
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L AC L L +G+ + A GY +V+V ++++++Y KCG + A+ F+ M
Sbjct: 249 LVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMD 308
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
KDL+ W+++I GL +G +A++ + MK G + D + +G++ AC + GL
Sbjct: 309 NKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCAC-----THMGLV 363
Query: 199 VHGYSIRRHLNLDVKVQT------SLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
G+S + + D + +VD+ + G L A + M + V W AL+
Sbjct: 364 EDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLG 423
Query: 252 G---FAQNGLAGSTLELLMEMQSCGFEP 276
+ LA LE L+E FEP
Sbjct: 424 ACRVYKNVELAELALEKLIE-----FEP 446
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 170/377 (45%), Gaps = 51/377 (13%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI+ N+ A+ + I D+V+AR+LF+ P R + +N++I Y +
Sbjct: 112 MIERNVIAWTAMINGYITCC----DLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRA 167
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+++M +DV W +++LN
Sbjct: 168 RELFDKMPNKDVMS------------------------W---------------NTVLNG 188
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVV 179
Y G + FE+M +++ W+++I G NG E + A+KRM +G + ++
Sbjct: 189 YASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDAT 248
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ ++ ACA LG G VH Y+ +V V+ +L+DMYAK G ++ A VFK+M
Sbjct: 249 LVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMD 308
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++++W +I G A +G L L M+ G PD ++ + L AC +G ++ G S
Sbjct: 309 NKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFS 368
Query: 300 IHGYTVRRFDFNLVLGT----SVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYG 354
+ D+++V ++D+ + G+ + A +M D + W ++ +
Sbjct: 369 Y--FKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACR 426
Query: 355 IHGHGEEALSLFLQMIE 371
++ + E A ++IE
Sbjct: 427 VYKNVELAELALEKLIE 443
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 171/361 (47%), Gaps = 20/361 (5%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M A F+++ + W++M G N ++ + +++MK + + ++++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C + + G VH + I+ + V T+L+DMYA G + A VF M N++ W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPD-SVSLVSALLACAQIGFLKLGKSIHGYTV 305
A+I+G+ + +L+ + P+ + L + +++ G+++ I +
Sbjct: 121 TAMINGYI------TCCDLVTARRLFDLAPERDIVLWNTMIS----GYIEAKDVIRAREL 170
Query: 306 --RRFDFNLVLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ + +++ +V++ Y+ G V +C R LF++M R++ SWN +I Y +G E
Sbjct: 171 FDKMPNKDVMSWNTVLNGYASNGDVMACER-LFEEMPERNVFSWNALIGGYTRNGCFSEV 229
Query: 363 LSLFLQM-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
LS F +M ++ V P+ +T ++LSA + G ++ G+ W + + + ++
Sbjct: 230 LSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGK-WVHVYAESHGYKGNVYVRNALM 288
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG--CHNHKKFSIGEKVAKKVLKLNPDD 479
D+ A+ G VE AL + SM + L W ++ G H H ++ K+ NPD
Sbjct: 289 DMYAKCGVVETALDVFKSMDNK-DLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDG 347
Query: 480 L 480
+
Sbjct: 348 I 348
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 301/559 (53%), Gaps = 6/559 (1%)
Query: 2 IKTNLSAYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
I+T L+ +VG +I +Y DI AR +F + + ++NS+I + + +
Sbjct: 129 IRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDA 188
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ YN M K + P + AL +C SL + +G++ + ++LG DV V +++L L
Sbjct: 189 VKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLAL 248
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP-REAVDAYKRMKKEGIDADEVV 179
Y + ++ E F M +D V W+++I L +G EA++ + M + G + V
Sbjct: 249 YAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVT 308
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ L+ + L S+ +H ++ ++ D ++ +L+ Y K+G ++ +F MS
Sbjct: 309 FINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMS 368
Query: 240 -RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
R + V+W ++ISG+ N L ++L+ M G D + + L ACA + L+ G
Sbjct: 369 ERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGM 428
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H +R + ++V+G++++DMYSKCG A F+ M R+L SWN +I+ Y HG
Sbjct: 429 EVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHG 488
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
HG+ AL LF +M + PDH TF +LSA SH GLV+EG +F M Y + P +HY
Sbjct: 489 HGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHY 548
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKL 475
+CMVDLL RAGE+++ ++ M +P + +W +L C N +K +G + A+ + +
Sbjct: 549 SCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNM 608
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
+P + + L+SN +A KWE++A R+ MR++ +KK G S V + +H F+ D S
Sbjct: 609 DPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNS 668
Query: 536 HNQYEDIVYVLKKLYLEMR 554
H + I LK+L ++R
Sbjct: 669 HPEKGLIYAKLKELDKKIR 687
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 227/452 (50%), Gaps = 13/452 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D VSARKLF+E+P R T+ +I Y++ P + G+ +MI E P+
Sbjct: 41 LINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPN 100
Query: 76 SSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVA 133
F A++AC S++ + G ++ A+ G + V VG+ ++N+Y KCG ++ A
Sbjct: 101 RFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSV 160
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F M KD V W+SMI GL N +AV +Y M+K G+ ++ + +CA LG
Sbjct: 161 FGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCI 220
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G HG I+ L++DV V +L+ +YA+T L VF M + V+W +I
Sbjct: 221 LLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGAL 280
Query: 254 AQNGLAGS-TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG----YTVRRF 308
A +G + S +E+ +EM G+ P+ V+ ++ L + + KL IH Y V+
Sbjct: 281 ADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVK-- 338
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQM-QSRDLISWNVIIASYGIHGHGEEALSLFL 367
D N + +++ Y K G +F +M + RD +SWN +I+ Y + +A+ L
Sbjct: 339 DDN-AIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVW 397
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M++ + D TFA++LSA + +E G + + ++ + +VD+ ++
Sbjct: 398 LMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI-RACLESDVVIGSALVDMYSKC 456
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
G ++ A + + M L W +++SG H
Sbjct: 457 GRIDYASRFFNLMPVR-NLYSWNSMISGYARH 487
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 184/357 (51%), Gaps = 11/357 (3%)
Query: 106 GYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
G+ +D+F+ ++++N+YV+ G A F++M ++ V W+ +I+G NG P +A
Sbjct: 30 GFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVL 89
Query: 166 KRMKKEGIDADEVVMMGLIQACAD-LGDSRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYA 223
K M EG + I+AC + + R G VHGY+IR LN V V L++MYA
Sbjct: 90 KEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYA 149
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K G +D A VF M + V+W ++I+G QN ++ M+ G P + +L+S
Sbjct: 150 KCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALIS 209
Query: 284 ALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
AL +CA +G + LG+ HG ++ D ++ + +++ +Y++ + + +F M RD
Sbjct: 210 ALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERD 269
Query: 343 LISWNVIIASYGIHGHG-EEALSLFLQMIETMVKPDHSTFASLL---SALSHSGLVEEGR 398
+SWN +I + G EA+ +FL+M+ P+ TF +LL S+LS S L +
Sbjct: 270 QVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQ-- 327
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ KY ++ ++ ++GE+E +I MS W +++SG
Sbjct: 328 --IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 10/202 (4%)
Query: 207 HLNL-------DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HLN+ D+ + +L+++Y + G A +F M N VTW LISG+ QNG+
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQ-IGFLKLGKSIHGYTVRR--FDFNLVLGT 316
+L EM GF P+ + SA+ AC + + + + G+ +HGY +R D + +G
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+I+MY+KCG AR++F M +D +SWN +I + E+A+ + M +T + P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 377 DHSTFASLLSALSHSGLVEEGR 398
+ S LS+ + G + G+
Sbjct: 203 SNFALISALSSCASLGCILLGQ 224
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 293/542 (54%), Gaps = 4/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y + AR +F+ +P R + N ++ Y+ E L L + D +
Sbjct: 51 LISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVV---DFGMN 107
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A+ A ++ MG + AV+ G+ +V +++L +Y +C M +A FE
Sbjct: 108 EYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFE 167
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D ++SMING + GQ ++ + M E D V + ++ CA + DS
Sbjct: 168 SVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVL 227
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH ++++ L L+V V ++LVDMY K H+ A+ F+ + N+V+W A+++ + Q
Sbjct: 228 GAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQ 287
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVL 314
N L L+L ++M+ G +P+ + AL +CA + L+ G ++ ++ ++ L++
Sbjct: 288 NELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLV 347
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++MYSK G A +F M RD++SWN+II Y HG E + F M+ V
Sbjct: 348 SNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAV 407
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P + TF +LSA + GLV+E Y+ + M+ + I P ++HY CMV LL R G ++EA
Sbjct: 408 IPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAE 467
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + + + W +LL+ C +K + +G +VA+++L+L P D+G + L+SN +A
Sbjct: 468 RFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKAN 527
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V VRK MR+ ++K PG S + V ++H F E+K H Q + I L++L +++
Sbjct: 528 RWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIK 587
Query: 555 AI 556
AI
Sbjct: 588 AI 589
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 189/380 (49%), Gaps = 27/380 (7%)
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
DL G+ + + + + DV + +++++ Y KCG++ A F+ M ++ V + +++
Sbjct: 26 DLSKGKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
G +G+ +E++ + ++ +E V+ + A A++ G HGY+++
Sbjct: 85 GYASSGRHKESL---QLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
V +++ MY + H++ AS VF+++S + + ++I+G+ G +L ++ M
Sbjct: 142 QRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPS 329
+ D VS V+ L CA + LG +H + +R + N+ +G++++DMY KC
Sbjct: 202 GEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVH 261
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A F+ + ++++SW ++ +Y + E+AL LFL M V+P+ T+A L++ +
Sbjct: 262 DANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCA 321
Query: 390 HSGLVEEGR----------YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
+ G +W L+VS ++++ +++G +E+A ++ S
Sbjct: 322 GLAALRTGNALGACVMKTGHWDHLLVSN-----------ALMNMYSKSGSIEDAHRVFIS 370
Query: 440 MSTEPGLAVWVALLSGCHNH 459
M + W +++G +H
Sbjct: 371 MPLRD-VVSWNLIITGYAHH 389
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
GD G ++H I + DV + +L+ YAK G + LA VF M N V+ L+
Sbjct: 25 GDLSKGKALHARLITA-AHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---- 306
SG+A +G +L+LL + F + L +A+ A A + +G+ HGY V+
Sbjct: 84 SGYASSGRHKESLQLL---RVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140
Query: 307 --RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R+ FN +V+ MY +C A +F+ + D ++N +I Y G + +L
Sbjct: 141 EQRYVFN-----AVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLG 195
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVD 422
+ M K D + S ++ L H +++ + K + Y + +VD
Sbjct: 196 IVRNMTGEAEKWD---YVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVD 252
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + V +A + + + E + W A+++
Sbjct: 253 MYGKCDHVHDANRAFEVLP-EKNVVSWTAVMTA 284
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
G L GK++H + F++VL ++I Y+KCG AR +FD M R+ +S N++++
Sbjct: 25 GDLSKGKALHARLITAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84
Query: 352 SYGIHGHGEEALSLF----LQMIETMVKPDHSTFASLLS----ALSHSGLVEEG----RY 399
Y G +E+L L M E ++ S A++ S H V+ G RY
Sbjct: 85 GYASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRY 144
Query: 400 WFDLMVSKY----KIQPTEK-----------HYACMVDLLARAGEVEEALKIVDSMSTEP 444
F+ ++ Y ++ K + M++ G+++ +L IV +M+ E
Sbjct: 145 VFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEA 204
Query: 445 ---GLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+VA+L C + K +G +V + LK
Sbjct: 205 EKWDYVSYVAVLGHCASMKDSVLGAQVHAQALK 237
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 311/569 (54%), Gaps = 46/569 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A+ LF+ + + ++N+II + S+ + E L + M++ VRP+
Sbjct: 227 LVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPN 286
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV----FVGSSMLNLYVKCGKMNEAM 131
T L AC L L G+EI + ND+ FVG +++++Y C + +
Sbjct: 287 GVTLASVLPACSHLEMLGCGKEIHAFVL---MNNDLIENSFVGCALVDMYCNCKQPEKGR 343
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
+ F+ M R+ + W++MI G V N EA++ + M E G+ + V + ++ AC
Sbjct: 344 LVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRC 403
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+H ++ D VQ +L+DMY++ G +++A +F +M+R +IV+W +I
Sbjct: 404 ESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMI 463
Query: 251 SGFAQNGLAGSTLELLMEMQ------------------SCGFEPDSVSLVSALLACAQIG 292
+G+ G L LL +MQ + +P+SV+L++ L CA +
Sbjct: 464 TGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALA 523
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L GK IH Y V++ ++ +G++++DMY+KCG + +R +F+QM R++I+WNV+I
Sbjct: 524 ALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIM 583
Query: 352 SYGIHGHGEEALSLFLQMIE-----TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+YG+HG GEEAL LF +M+E ++P+ T+ ++ ++LSHSG+V+EG F M +
Sbjct: 584 AYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKA 643
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM-STEPGLAVWVALLSGCHNHKKFSIG 465
K+ I+PT HYAC+VDLL R+G++EEA ++ +M S + W +LL C H+ IG
Sbjct: 644 KHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIG 703
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
E AK + L+P+ L + +Q + + + M++ G++K PG S +E E
Sbjct: 704 EIAAKNLFVLDPNVLD--------YGTKQ-----SMLGRKMKEKGVRKEPGCSWIEHGDE 750
Query: 526 LHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+H F+ D SH Q +++ L+ L L M+
Sbjct: 751 VHKFLAGDVSHPQSKEVHEYLETLSLRMK 779
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 199/405 (49%), Gaps = 15/405 (3%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ + Y M+ V PD+ F LKA + DL +G+++ + G V +S++
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
N+Y KCG ++ A F+++ +D V W+SMIN + AV ++ M E +
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 179 VMMGLIQACADLGDS-RFGLSVHGYSIRRHLNLDVKVQT--SLVDMYAKTGHLDLASHVF 235
++ + AC++L + G VH + +R N D + T +LV MYAK G + A +F
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLR---NGDWRTFTNNALVTMYAKLGRVYEAKTLF 244
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
++V+W +IS +QN L L M G P+ V+L S L AC+ + L
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLG 304
Query: 296 LGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
GK IH + + D N +G +++DMY C P R +FD M R + WN +IA Y
Sbjct: 305 CGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGY 364
Query: 354 GIHGHGEEALSLFLQMI-ETMVKPDHSTFASLLSAL--SHSGLVEEGRYWFDLMVSKYKI 410
+ EA+ LF++M+ E + P+ T +S+L A S L +EG + V K+
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIH---SCVVKWGF 421
Query: 411 QPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + ++D+ +R G +E A I SM+ + + W +++G
Sbjct: 422 EKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNTMITG 465
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 192/371 (51%), Gaps = 7/371 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG DI +AR++F+E+ R ++NS+I A R E + L+ M+ E+V P
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185
Query: 76 SSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGN-DVFVGSSMLNLYVKCGKMNEAMVA 133
S T AC +L++ L +G+++ A L G+ F ++++ +Y K G++ EA
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQV--HAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ KDLV W+++I+ L N + EA+ M + G+ + V + ++ AC+ L
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEML 303
Query: 194 RFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H + + + L + V +LVDMY + VF M R I W A+I+G
Sbjct: 304 GCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAG 363
Query: 253 FAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+ +N +EL +EM G P+SV+L S L AC + + IH V+ F+
Sbjct: 364 YVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEK 423
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ + +++DMYS+ G AR++F M +D++SWN +I Y + G ++AL+L M
Sbjct: 424 DKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQ 483
Query: 371 ETMVKPDHSTF 381
+ +TF
Sbjct: 484 RGQAEHRINTF 494
>gi|242055533|ref|XP_002456912.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
gi|241928887|gb|EES02032.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
Length = 648
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 276/526 (52%), Gaps = 10/526 (1%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD---LK 93
P V +Y + I ++ P + L + M++ +RP+ TF A KA S
Sbjct: 76 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRCAAA 135
Query: 94 MGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
+G ++ A+ GY +D FV + L++Y K G++ A F++M +++V W++++
Sbjct: 136 VGPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAVMTNA 195
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
V +G+P E V+AY ++ G + V + ACA + G HG+ + + DV
Sbjct: 196 VLDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGFDKDV 255
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
V S+VD Y K + A VF M N V+W +++ +AQNG + + +
Sbjct: 256 SVSNSMVDFYGKCRCMGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRA 315
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCA 331
G EP + S L CA + L LG+++H R D N+ + ++++DMY KCG A
Sbjct: 316 GEEPTDFMVSSLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDA 375
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI---ETMVKPDHSTFASLLSAL 388
+F +M R+L++WN +I Y G AL++F +MI ET P++ T ++L+A
Sbjct: 376 EQVFFEMPQRNLVTWNAMIGGYAHIGDAWNALAVFDEMIMGRET--APNYITIVNVLTAC 433
Query: 389 SHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAV 448
S GL +EG F M ++ I+P +HYAC+VDLL RAG E+A +I+ M P ++V
Sbjct: 434 SRGGLTKEGYELFQTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSISV 493
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRK 508
W ALL GC H K +G A+K+ +L+P D G H L+SN A +W E VRK M+
Sbjct: 494 WGALLGGCKMHGKTELGRVAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKN 553
Query: 509 SGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
G+KK PG S + +H F +D +H +I +L KL +M+
Sbjct: 554 VGIKKDPGRSWITWKNIVHVFQAKDTTHEMNSEIQALLAKLKGQMQ 599
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + AR+LF+E+P R V +N+++ P E + Y + P+ +
Sbjct: 163 MYFKTGRLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPIETVEAYFGLRGAGGMPNVVS 222
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
AC + L +GE+ + G+ DV V +SM++ Y KC M +A + F+ M
Sbjct: 223 VCAFFNACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRCMGKARLVFDGMG 282
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
++ V W SM+ NG EA Y ++ G + + ++ L+ CA L G +
Sbjct: 283 VRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLDLGRA 342
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H + R ++ ++ V ++LVDMY K G + A VF M + N+VTW A+I G+A G
Sbjct: 343 LHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTWNAMIGGYAHIGD 402
Query: 259 AGSTLELLMEMQSCGFE--PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG- 315
A + L + EM G E P+ +++V+ L AC++ G K G + +RF +
Sbjct: 403 AWNALAVFDEM-IMGRETAPNYITIVNVLTACSRGGLTKEGYELFQTMKQRFGIEPRIEH 461
Query: 316 -TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
V+D+ + G+ A + M R IS W ++ +HG E
Sbjct: 462 YACVVDLLGRAGMEEQAYEIIQGMPMRPSISVWGALLGGCKMHGKTE 508
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 8/387 (2%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D A++A ++ ++G +A+ L F+ + ++NLY K A A
Sbjct: 12 DPQLLAGAVEAAIASRSPRLGRAAHARALRLLAPALPPFICAHLVNLYSKLDLPGAAAAA 71
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD- 192
+V +++ I+G + +P +A+ A+ M + G+ ++ +A A
Sbjct: 72 LAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPR 131
Query: 193 --SRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
+ G VH ++R +L D V + +DMY KTG L LA +F M N+V W A+
Sbjct: 132 CAAAVGPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAV 191
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
++ +G T+E ++ G P+ VS+ + ACA + L LG+ HG+ + F
Sbjct: 192 MTNAVLDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGF 251
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
D ++ + S++D Y KC AR +FD M R+ +SW ++ +Y +G EEA ++L
Sbjct: 252 DKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLG 311
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+P +SLL+ + ++ GR + ++ I + +VD+ + G
Sbjct: 312 ARRAGEEPTDFMVSSLLTTCAGLLGLDLGRA-LHAVAARSCIDANIFVASALVDMYGKCG 370
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
+++A ++ M L W A++ G
Sbjct: 371 GIQDAEQVFFEMPQR-NLVTWNAMIGG 396
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 121/250 (48%), Gaps = 13/250 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ YG + AR +F+ + +R ++ S+++AY++ + E +Y + P
Sbjct: 261 MVDFYGKCRCMGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPT 320
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L C L+ L +G + A ++FV S+++++Y KCG + +A F
Sbjct: 321 DFMVSSLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVFF 380
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSR 194
+M +++LV W++MI G G A+ + M + + ++ ++ AC SR
Sbjct: 381 EMPQRNLVTWNAMIGGYAHIGDAWNALAVFDEMIMGRETAPNYITIVNVLTAC-----SR 435
Query: 195 FGLSVHGY----SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
GL+ GY ++++ ++ +++ +VD+ + G + A + + M R +I WG
Sbjct: 436 GGLTKEGYELFQTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSISVWG 495
Query: 248 ALISGFAQNG 257
AL+ G +G
Sbjct: 496 ALLGGCKMHG 505
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 303/567 (53%), Gaps = 7/567 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + K+F +P R T+++++ Y+ + E + ++N ++E
Sbjct: 159 LVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGS 218
Query: 76 SS--TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
S FT L + + + + +G +I ++ G V + ++++ +Y KC +NEA
Sbjct: 219 DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ ++ + WS+M+ G NG+ EAV + RM GI E ++G++ AC+D+
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + ++ + T+LVDMYAK G L A F + ++ W +LISG+
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QN L L M++ G P+ ++ S L AC+ + L+LGK +HG+T++ F +
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G+++ MYSKCG +F + ++D++SWN +I+ +G G+EAL LF +M+
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++PD TF +++SA SH G VE G ++F++M + + P HYACMVDLL+RAG+++E
Sbjct: 519 GMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKE 578
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + ++S + + GL +W LLS C NH K +G +K++ L + + +S +
Sbjct: 579 AKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTA 638
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYE---DIVYVLKKL 549
+ +V V K MR +G+ K G S +E+ + H F++ D H E D+V ++ +
Sbjct: 639 LGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQ 698
Query: 550 YLEMRAISSWLQGHMEEHEEHDPLSTA 576
+E + L E EE LST+
Sbjct: 699 MIE-EGFVTVLDSSFVEEEEGTQLSTS 724
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 246/502 (49%), Gaps = 42/502 (8%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRK---ESP 57
+I+T S ++ Y + A +F + + V ++NS+I YS+ S
Sbjct: 40 IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSS 99
Query: 58 FEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
+ V+ L+ +M +D+ P++ T KA SL +G + V++ D++V +S+
Sbjct: 100 YTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK---RMKKEGID 174
+ +Y K G + + + F M ++ WS+M++G G+ EA+ + R K+EG D
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+D V ++ + A G +H +I+ L V + +LV MY+K L+ A +
Sbjct: 220 SD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F + N +TW A+++G++QNG + ++L M S G +P ++V L AC+ I +L
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 295 KLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
+ GK +H + ++ F+ +L T+++DMY+K G + AR FD +Q RD+ W +I+ Y
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG--------RYWFDL-- 403
+ EEAL L+ +M + P+ T AS+L A S +E G ++ F L
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 404 --------MVSK----------YKIQPTEK--HYACMVDLLARAGEVEEALKIVDSM--- 440
M SK ++ P + + M+ L+ G+ +EAL++ + M
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Query: 441 STEPGLAVWVALLSGCHNHKKF 462
EP +V ++S C +HK F
Sbjct: 519 GMEPDDVTFVNIISAC-SHKGF 539
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 189/371 (50%), Gaps = 21/371 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L + ++ +Y + A K+F+ R T+++++ YS+ E +
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+++M ++P T L AC + L+ G+++ ++LG+ +F ++++++Y
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G + +A F+ +Q +D+ W+S+I+G V N EA+ Y+RMK GI ++ M
Sbjct: 368 AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA 427
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+++AC+ L G VHG++I+ L+V + ++L MY+K G L+ + VF+
Sbjct: 428 SVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK 487
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++V+W A+ISG + NG LEL EM + G EPD V+ V+ + AC+ GF++ G
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG---- 543
Query: 302 GYTVRRFDFNLV---LG--------TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVI 349
F FN++ +G ++D+ S+ G A+ + L W ++
Sbjct: 544 -----WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRIL 598
Query: 350 IASYGIHGHGE 360
+++ HG E
Sbjct: 599 LSACKNHGKCE 609
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 14/402 (3%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
++ + ++ P +ST L +L G + + + G + + ++N Y
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG---QPREAVDAYKRMKKEGIDADEVV 179
KCGK+ +A F + KD+V W+S+I G NG + ++ M+ + I +
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ G+ +A + L S G H ++ D+ V TSLV MY K G ++ VF M
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 240 RINIVTWGALISGFAQNGL---AGSTLELLMEMQSCGFEPDSV--SLVSALLACAQIGFL 294
N TW ++SG+A G A L + + G + D V +++S+L A +G
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG-- 238
Query: 295 KLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
LG+ IH T++ V L +++ MYSKC + A +FD R+ I+W+ ++ Y
Sbjct: 239 -LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+G EA+ LF +M +KP T +L+A S +EEG+ ++ K +
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KLGFERH 356
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ A+AG + +A K D + E +A+W +L+SG
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISG 397
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 287/527 (54%), Gaps = 2/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+ + + T+N+++ YS++ + + L+ +M RP TF L A +
Sbjct: 193 ACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQ 252
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ D++ G+++ V+ + +VFV +++L+ Y K ++ EA F +M D + ++ +
Sbjct: 253 MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I +NG+ E+++ ++ ++ D + L+ A+ + G +H +I
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V SLVDMYAK A+ +F +++ + V W ALISG+ Q GL L+L +E
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGV 327
M DS + S L ACA + L LGK +H +R N+ G++++DMY+KCG
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F +M R+ +SWN +I++Y +G G AL F QMI + ++P+ +F S+L A
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH GLVEEG +F+ M YK++P +HYA MVD+L R+G +EA K++ M EP
Sbjct: 553 CSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI 612
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ++L+ C HK + K A ++ + D + +SN +A +W+ V V+K +
Sbjct: 613 MWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKAL 672
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
R+ G++KVP YS VE+ + H F D SH Q ++I L +L +M
Sbjct: 673 RERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQM 719
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 208/445 (46%), Gaps = 3/445 (0%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I Y ++ +AR LF+ + R V T+ +I Y++ E L+ M +
Sbjct: 75 STNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHG 134
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ PD T L + ++ V++GY + + V +S+L+ Y K + A
Sbjct: 135 MVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLAC 194
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ M KD V +++++ G G +A++ + +M+ G E ++ A +
Sbjct: 195 HLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMD 254
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
D FG VH + ++ + +V V +L+D Y+K + A +F M ++ +++ LI+
Sbjct: 255 DIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLIT 314
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
A NG +LEL E+Q F+ + L A L++G+ IH + +
Sbjct: 315 CCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAIS 374
Query: 312 LVL-GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
VL G S++DMY+KC A +F + + + W +I+ Y G E+ L LF++M
Sbjct: 375 EVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMH 434
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ D +T+AS+L A ++ + G+ ++ + A +VD+ A+ G +
Sbjct: 435 RAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSA-LVDMYAKCGSI 493
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
+EAL++ M ++ W AL+S
Sbjct: 494 KEALQMFQEMPVRNSVS-WNALISA 517
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 195/390 (50%), Gaps = 7/390 (1%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
MIK P++ F ++ + DL +++ E+ + N V ++M+ Y+K G
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFD---EMPHKN-VISTNTMIMGYLKSGN 88
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++ A F+ M ++ +V W+ +I G + + EA + + M + G+ D + + L+
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSG 148
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+ VHG+ ++ + + V SL+D Y KT L LA H+FK+M+ + VT+
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
AL++G+++ G + L +MQ GF P + + L A Q+ ++ G+ +H + V+
Sbjct: 209 NALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268
Query: 307 -RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F +N+ + +++D YSK AR LF +M D IS+NV+I +G EE+L L
Sbjct: 269 CNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLEL 328
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F ++ T FA+LLS ++S +E GR + I + +VD+ A
Sbjct: 329 FRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS-LVDMYA 387
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + EA +I ++ + + W AL+SG
Sbjct: 388 KCDKFGEANRIFADLAHQSSVP-WTALISG 416
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 130/245 (53%), Gaps = 7/245 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS ++ +Y + A ++F +L + + ++I Y +K + L L+ +M +
Sbjct: 379 GNS---LVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHR 435
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ DS+T+ L+AC +L L +G+++ + + G ++VF GS+++++Y KCG + E
Sbjct: 436 AKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKE 495
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A+ F++M ++ V W+++I+ NG A+ ++++M G+ + V + ++ AC+
Sbjct: 496 ALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSH 555
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTW 246
G GL S+ + L+ + + S+VDM ++G D A + M + + W
Sbjct: 556 CGLVEEGLQYFN-SMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMW 614
Query: 247 GALIS 251
++++
Sbjct: 615 SSILN 619
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 286/505 (56%), Gaps = 6/505 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
D RK+F+ L ++ V ++ S+I Y R P L L+ +M+ V P++ T + +
Sbjct: 168 TDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVI 227
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KAC L DLK+G + G+ ++ + S++++++ + +++A F+++ D +
Sbjct: 228 KACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAI 287
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
CW+S+I+ L N EA+ + M+++ G+ D ++ AC +LG + G VH
Sbjct: 288 CWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAK 347
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
I +V V++SLVDMY K G + + +F M N V+W AL+ G+ QNG S
Sbjct: 348 VITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSV 407
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDM 321
+++ +M+ + D + L CA + ++ GK +H +R+ + ++++ ++++D+
Sbjct: 408 IQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDL 463
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG A+ +FDQM R+LI+WN +I + +G GEEAL +F QM++ +KPD+ +F
Sbjct: 464 YAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISF 523
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+L A SH GLV+EGR +F M Y I+ +HY+CMVDLL RAG +EEA ++++
Sbjct: 524 IGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSD 583
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
++W ALL C + I E++AK+V++L PD + L++N + +W +
Sbjct: 584 FRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALR 643
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGEL 526
+R+ M+ G+ K+PG S +E L
Sbjct: 644 IRRLMKDRGVNKMPGKSWIETKNNL 668
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 200/411 (48%), Gaps = 31/411 (7%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK-MNEAMVAFEKMQRKD 141
L+ C ++ G +I ++ G D FVG+S+L LY K G E F+ + KD
Sbjct: 125 LQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKD 184
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
++ W+SMI+G V G+P +++ + +M G++ + + +I+AC++LGD + G HG
Sbjct: 185 VISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHG 244
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+ R + + + ++L+DM+ + LD A +F + + + W ++IS +N
Sbjct: 245 VVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDE 304
Query: 262 TLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L MQ G PD + + L AC +G LK GK +H + F N+V+ +S++
Sbjct: 305 ALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLV 364
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMY KCG ++ +FD+M ++ +SW+ ++ Y +G + + +F M K D
Sbjct: 365 DMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIF----RKMEKVDLY 420
Query: 380 TFASLLSALSHSGLVEEGRY----------WFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
F ++L + V +G+ W D++V + +VDL A+ G
Sbjct: 421 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-----------SALVDLYAKCGC 469
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
+E A I D M L W +++ G + + ++ +++K + PD
Sbjct: 470 IEYAQTIFDQMPVR-NLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPD 519
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 162/316 (51%), Gaps = 6/316 (1%)
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
S I L +G+ A+ K + I A V+ L+Q C + GL +H + I+
Sbjct: 88 SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 147
Query: 207 HLNLDVKVQTSLVDMYAKTG-HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L D V SL+ +Y K G VF + ++++W ++ISG+ + G ++LEL
Sbjct: 148 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 207
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSK 324
+M + G EP++ +L + + AC+++G LKLG+ HG + R FD N V+ +++IDM+ +
Sbjct: 208 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 267
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFAS 383
AR LFD++ D I W II++ + +EAL F M + PD TF +
Sbjct: 268 NCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGT 327
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L+A + G +++G+ +++ + +VD+ + G V E+ +I D M +
Sbjct: 328 VLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE-SSLVDMYGKCGSVGESQRIFDRMPIK 386
Query: 444 PGLAVWVALLSG-CHN 458
++ W ALL G C N
Sbjct: 387 NSVS-WSALLGGYCQN 401
>gi|449473751|ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Cucumis sativus]
Length = 591
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 306/541 (56%), Gaps = 18/541 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG +VSAR +F+E+P R + ++ S+I AY F L ++ M +E + P+
Sbjct: 52 MMEVYGKCGCMVSARDVFDEMPNRDLVSWTSMISAYVNGGDVFCALDIFEGMRRE-LEPN 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T V L+AC + L +G + V+ G D + +S L +Y + G+ +E V F
Sbjct: 111 SVTVMVMLQACCATQYLVLGRLLQCYVVKNGLLFDTHLQNSFLRMYSRLGRQDEFGVFFS 170
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE---GIDADEVVMMGLIQACADLGD 192
++ K+ V W+ +++ G + VD ++ E I+ +++ G+ + D
Sbjct: 171 EIDFKNAVSWNILMSFYSSMGDIVKVVDILNKIMGEVPLSIETLTILISGIATS-----D 225
Query: 193 SR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
SR G ++H +I+ L D + TSL+ MYAK G L+ ++ +FK + +IVTWGA+
Sbjct: 226 SRCLMLGENLHSLAIKSGL-YDGILCTSLLGMYAKFGELENSTSLFKEIPNRSIVTWGAM 284
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL-ACAQIGFLKLGKSIHGYTVRRF 308
+S F QNG +++ +MQ G +P SV ++ L+ A A +G L+LGK+IH +R +
Sbjct: 285 MSSFIQNGHFDDAVDIFKQMQVAGLKP-SVGILKHLIDAYAFLGALQLGKAIHCCLIRIY 343
Query: 309 DF---NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F N L TSV++MY +CG + AR FD + +D+++W +I YG HG G +AL+L
Sbjct: 344 GFVVCNTRLETSVLNMYVRCGSIASARKCFDLIIIKDVVAWTSMIEGYGAHGLGVDALNL 403
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F QM V P++ TF SLLSA SHSGLV EG F M S++ I+P +HY C VDLL+
Sbjct: 404 FHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLS 463
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
R+ V EA I+ M++ +W AL+ C + I A ++L+L PD++G + L
Sbjct: 464 RSTRVREAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEPDNVGYYTL 523
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYV 545
+SN A +W E +R + + + K PG+S +E+NG +H F+ D+SHN+ +I V
Sbjct: 524 LSNSQASVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNRTNEIYDV 583
Query: 546 L 546
L
Sbjct: 584 L 584
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 202/397 (50%), Gaps = 11/397 (2%)
Query: 70 EDVRPDSSTFTVALKACVSL---MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
+VR + FT+ + V++ +D+ + + +G+ +D++ ++M+ +Y KCG
Sbjct: 2 REVRVEHDGFTLPIVNQVTMSIWVDVAYAGMVHCVGIRMGFSSDLYFCNTMMEVYGKCGC 61
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M A F++M +DLV W+SMI+ V G A+D ++ M++E ++ + V +M ++QA
Sbjct: 62 MVSARDVFDEMPNRDLVSWTSMISAYVNGGDVFCALDIFEGMRRE-LEPNSVTVMVMLQA 120
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C G + Y ++ L D +Q S + MY++ G D F + N V+W
Sbjct: 121 CCATQYLVLGRLLQCYVVKNGLLFDTHLQNSFLRMYSRLGRQDEFGVFFSEIDFKNAVSW 180
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL---LACAQIGFLKLGKSIHGY 303
L+S ++ G +++L ++ G P S+ ++ L +A + L LG+++H
Sbjct: 181 NILMSFYSSMGDIVKVVDILNKIM--GEVPLSIETLTILISGIATSDSRCLMLGENLHSL 238
Query: 304 TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ ++ +L TS++ MY+K G + +LF ++ +R +++W +++S+ +GH ++A+
Sbjct: 239 AIKSGLYDGILCTSLLGMYAKFGELENSTSLFKEIPNRSIVTWGAMMSSFIQNGHFDDAV 298
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK-IQPTEKHYACMVD 422
+F QM +KP L+ A + G ++ G+ ++ Y + + +++
Sbjct: 299 DIFKQMQVAGLKPSVGILKHLIDAYAFLGALQLGKAIHCCLIRIYGFVVCNTRLETSVLN 358
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ R G + A K D + + +A W +++ G H
Sbjct: 359 MYVRCGSIASARKCFDLIIIKDVVA-WTSMIEGYGAH 394
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 293/540 (54%), Gaps = 1/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y + ARKLF+ +P R + ++ ++I Y+ K+ E LG++ M + +
Sbjct: 153 LVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLN 212
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
FT L A V + G+++ V+ G V V ++++ +Y KCG +N +++ FE
Sbjct: 213 EFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFE 272
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ + WS++I G G +A+ + +M G E ++G+++AC+D+
Sbjct: 273 MCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEE 332
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G HGY ++ + T+LVDMYAK G A F + ++V W ++I+G+ Q
Sbjct: 333 GKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQ 392
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG L + MQ P+ +++ S L AC+ + L+ GK IH T++ L +
Sbjct: 393 NGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSI 452
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++ MY+KCG +F +M RD++SWN +I+ +GHG EAL LF +M
Sbjct: 453 RSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGT 512
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPDH TF ++LSA SH G+V+ G +F++M ++ + P +HYACMVD+L+RAG++ EA
Sbjct: 513 KPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAK 572
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++S + G+ +W LL C NH + +G +K+++L + + L+S+ +
Sbjct: 573 EFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMG 632
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ +V VR+ M+ G++K G S +E+ +H F++ D+ H Q E+I + +L M+
Sbjct: 633 RLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMK 692
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 235/457 (51%), Gaps = 12/457 (2%)
Query: 6 LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR---KESPFEVLG 62
LS+ +I Y + A+ +FE L + V +YN +I S K S F VL
Sbjct: 39 LSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNF-VLE 97
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKM-GEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +MI ++ PD+ TF A + ++ ++ +DVFVGSS++N Y
Sbjct: 98 LFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFY 157
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G + EA F++M ++LV W++MI+G +EA+ + M+ + +E V
Sbjct: 158 CKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFT 217
Query: 182 GLIQA--CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ A C + DS G VH ++ + V V +LV MYAK G+L+ + +F+ S
Sbjct: 218 SVLSALVCPEFVDS--GKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCS 275
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N +TW ALI+G++Q G + L+L +M GF P +LV L AC+ + ++ GK
Sbjct: 276 DKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQ 335
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
HGY ++ ++ + T+++DMY+K G AR FD + DL+ W IIA Y +G
Sbjct: 336 THGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGK 395
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EEALS++ +M + P+ T AS+L A S+ +E+G+ + KY + P +
Sbjct: 396 NEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTI-KYGLGPELSIRS 454
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + A+ G +EE + I M + + W A++SG
Sbjct: 455 ALSTMYAKCGSLEEGVLIFRRM-LQRDIVSWNAMISG 490
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 162/297 (54%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K + + + + ++ +Y ++ + LFE + T++++I YS+ +
Sbjct: 239 VVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKA 298
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+++M P T LKAC + ++ G++ ++ GY ++ ++++++
Sbjct: 299 LKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDM 358
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G +A F+ + DLV W+S+I G V NG+ EA+ Y RM+ I +E+ M
Sbjct: 359 YAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTM 418
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++AC++L G +H +I+ L ++ ++++L MYAK G L+ +F+ M +
Sbjct: 419 ASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+IV+W A+ISG +QNG LEL EM+ G +PD ++ V+ L AC+ +G +K G
Sbjct: 479 RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRG 535
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 277/509 (54%), Gaps = 11/509 (2%)
Query: 56 SPFEVL--GLYNQMI---KEDVRPDSST----FTVALKACVSLMDLKMGEEIWRKAVELG 106
SP+ L Q+I K D P S + + L++C+S L+ G+++ + +LG
Sbjct: 29 SPYYFLHQSFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLG 88
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
++ + + ++N Y C + A F+K+ + +L W+ +I +NG A+ Y
Sbjct: 89 IAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYH 148
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+M + G+ D + +++AC+ L G +H IR DV V +LVDMYAK G
Sbjct: 149 QMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCG 208
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+ A HVF + + V W ++++ +AQNG +L L EM + G P +LV+ +
Sbjct: 209 CVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVIS 268
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+ A I L G+ IHG+ R F +N + T++IDMY+KCG A LF++++ + ++S
Sbjct: 269 SSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVS 328
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN II Y +HG EAL LF +M++ +PDH TF L+A S L++EGR ++LMV
Sbjct: 329 WNAIITGYAMHGLAVEALDLFERMMKE-AQPDHITFVGALAACSRGRLLDEGRALYNLMV 387
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
+I PT +HY CMVDLL G+++EA ++ M P VW ALL+ C H +
Sbjct: 388 RDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELA 447
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
E +K+++L PDD G + +++N +A KWE VA +R+ M G+KK S +EV +
Sbjct: 448 EVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNK 507
Query: 526 LHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
++AF+ D SH I LK+L MR
Sbjct: 508 VYAFLSGDVSHPNSGAIYAELKRLEGLMR 536
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 207/397 (52%), Gaps = 7/397 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y N + +A LF+++P + +N +I AY+ + LY+QM++ ++P
Sbjct: 98 KLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKP 157
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T LKAC +L + G I + + G+ DVFVG++++++Y KCG + +A F
Sbjct: 158 DNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVF 217
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+K+ +D V W+SM+ NG P E++ M +G+ E ++ +I + AD+
Sbjct: 218 DKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLP 277
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ R + KV+T+L+DMYAK G + +A +F+ + +V+W A+I+G+A
Sbjct: 278 HGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYA 337
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+GLA L+L M +PD ++ V AL AC++ L G++++ VR N +
Sbjct: 338 MHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTV 396
Query: 315 G--TSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
T ++D+ CG A L QM D W ++ S HG+ E A ++IE
Sbjct: 397 EHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIE 456
Query: 372 TMVKPDHS-TFASLLSALSHSGLVEEGRYWFDLMVSK 407
++PD S + L + + SG E LM+ K
Sbjct: 457 --LEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDK 491
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 273/516 (52%), Gaps = 2/516 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF E+P + ++N +I Y++ E L L+ QM D +P TF L V
Sbjct: 197 ASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
D+ G++I A++ Y D+FV +++L+ Y K ++ A F++M D V ++ +
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNII 316
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G +NGQ ++ D +KR++ D ++ A + G H ++
Sbjct: 317 ITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTA 376
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V+V +LVDMYAK + A+ +F N++ N V W A+IS + Q G L++ E
Sbjct: 377 VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKE 436
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL-GTSVIDMYSKCGV 327
M D + S L A A + + LGK +H +R + V G+ ++DMY+ CG
Sbjct: 437 MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGS 496
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +F +M R+++ WN +I++Y +G E S F MIE+ + PD +F S+L+A
Sbjct: 497 MKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTA 556
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH GLVE+ ++F+ M YK+ P KHYA M+D+L R+G EA ++ M EP
Sbjct: 557 CSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEV 616
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ++L+ C HK + +K A ++ K++ D + +SN +A KWE A V+K M
Sbjct: 617 MWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAM 676
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
R+ G+KKV YS VE++ +H F D++H Q E I
Sbjct: 677 RERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQI 712
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 3/446 (0%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
+SV +++ Y ++ AR+LFE + R ++ +I YS+ P E LY +M +
Sbjct: 78 SSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRS 137
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
V+PD TF L LK +I + G+ + V +S+++ Y K ++ A
Sbjct: 138 GVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIA 197
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F +M KD V ++ MI G G EA+ + +M+ ++
Sbjct: 198 SQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGS 257
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D FG +HG +I+ D+ V +L+D Y+K ++DLA ++F M ++ V++ +I
Sbjct: 258 EDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIII 317
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
+G+A NG + +L +Q F+ + + L A L +G+ H V
Sbjct: 318 TGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAV 377
Query: 311 NLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ V +G +++DMY+KC A +F + R+ + W II+ Y G EEAL +F +M
Sbjct: 378 SEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM 437
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
V D +TFAS L A ++ V G+ ++ + + + + +VD+ A G
Sbjct: 438 NRENVHGDQATFASTLKASANLASVSLGKQLHSSVI-RLGLLSSVFSGSVLVDMYANCGS 496
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
+++A+++ M + + W AL+S
Sbjct: 497 MKDAIEVFKEMP-DRNIVCWNALISA 521
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 121/240 (50%), Gaps = 4/240 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y A ++F L R + +II Y +K E L ++ +M +E+V D
Sbjct: 386 LVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGD 445
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+TF LKA +L + +G+++ + LG + VF GS ++++Y CG M +A+ F+
Sbjct: 446 QATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFK 505
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +++VCW+++I+ NG ++ M + G+ D V + ++ AC+ G
Sbjct: 506 EMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEK 565
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
L S+ + LD + + +++D+ ++G + A ++ M + V W ++++
Sbjct: 566 ALWYFN-SMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNS 624
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 295/520 (56%), Gaps = 12/520 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ + ++Y + A LF ELP + V ++ S+I Y + E + L+ +M++ +
Sbjct: 257 ISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGL 316
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD + L + ++ G+ ++ +G++V VG++++++Y K ++ A
Sbjct: 317 QPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGR 376
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-----IDADEVVMMGLIQAC 187
F + ++D W+ MI G G + ++ Y+ M+ DA+ +V I +C
Sbjct: 377 VFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLV--SAISSC 434
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI--NIVT 245
+ L + R G S H YSI+ L+ D V L+ MY + G D A +F ++++ ++VT
Sbjct: 435 SRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIF-GLAKLKGDVVT 493
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W LIS +A G + + + L +M + G P+S +L++ + ACA + L+ G+ IH Y
Sbjct: 494 WNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVK 553
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+D+++ + T++IDMY+KCG AR +FD M D+++WNV+I+ YG+HG ++AL
Sbjct: 554 EMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 613
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF +M +KP+ TF ++LSA HSGL+EEGR F M KY ++P KHYACMVDLL
Sbjct: 614 LFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLL 672
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
++G ++EA +V +M EP +W LLS C H F +G ++AKK + ++ G +
Sbjct: 673 GKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYI 732
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
L+SN + +KW+E+ +R+ M+ G++K G+S V+ G
Sbjct: 733 LISNSYGSAKKWDEIEKLREAMKNHGVQKGAGWSAVDYCG 772
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 244/472 (51%), Gaps = 24/472 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK----ED 71
++ +Y + A KLFEE+ R V + +++ R + L +M++
Sbjct: 155 LVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGK 214
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP+S T L+AC L +L G + AV++G G+ V S++ ++Y KC +A
Sbjct: 215 ARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDAC 274
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F ++ KD+V W+S+I + G REA++ ++ M + G+ D+V++ L+ + G
Sbjct: 275 SLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSG 334
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G + H ++R+ +V V +L+ MY K +D A VF+ + + + +W +I
Sbjct: 335 NVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIV 394
Query: 252 GFAQNGLAGSTLELLMEMQ---SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
G+ + G LEL EMQ + F D+ SLVSA+ +C+++ L+LG+S H Y+++ +
Sbjct: 395 GYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHW 454
Query: 309 -DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLF 366
D + + +I MY +CG A +F + + D+++WN +I+SY GH A+SL+
Sbjct: 455 LDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLY 514
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGR---YWFDLMVSKYKIQPTEKHYACMVDL 423
QM+ + P+ +T +++SA ++ +E G + M Y + ++D+
Sbjct: 515 DQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTA----LIDM 570
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
A+ G++ A +I DSM + + W ++SG H GE AK+ L+L
Sbjct: 571 YAKCGQLGTARRIFDSM-LQHDVVAWNVMISGYGMH-----GE--AKQALEL 614
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 233/538 (43%), Gaps = 49/538 (9%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ + LS + V ++++ Y A F P +NS+I + L
Sbjct: 36 VTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDFVAAL 95
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY----GNDVFVGSSM 117
+ +M+ RP T +A A L L +G + V G G V V SS+
Sbjct: 96 NAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSL 155
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-- 175
+ +Y +CG + +A+ FE+M+ +D+V W+++++G V NG+ + + M + D
Sbjct: 156 VYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKA 215
Query: 176 --DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
+ M ++AC L + G +HGY+++ + V ++L MY+K + A
Sbjct: 216 RPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACS 275
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA-CAQIG 292
+F + ++V+W +LI + GL +EL EM G +PD V LVS LL+ G
Sbjct: 276 LFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDV-LVSCLLSGLGNSG 334
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+ GK+ H ++R F N+++G ++I MY K + A +F + RD SWN++I
Sbjct: 335 NVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIV 394
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR-----------YW 400
Y G + L L+ +M SL+SA+S + E R +W
Sbjct: 395 GYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHW 454
Query: 401 FD-------LMVSKY----------------KIQPTEKHYACMVDLLARAGEVEEALKIV 437
D +++ Y K++ + ++ A G A+ +
Sbjct: 455 LDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLY 514
Query: 438 DSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD-DLGIHALVSNFFA 491
D M TE P + ++S C N GEK+ V ++ D D+ I+ + + +A
Sbjct: 515 DQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYA 572
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
AV G + + +++ Y G+ A +AF R D W+S+I A
Sbjct: 35 AVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDFVAA 94
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL----NLDVKVQTS 217
++A++RM + A A+LG G SVH Y +R L V V +S
Sbjct: 95 LNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSS 154
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE-- 275
LV MYA+ G + A +F+ M ++V W A++SG +NG G L L+EM +
Sbjct: 155 LVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGK 214
Query: 276 --PDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCA 331
P+S ++ S L AC + L G+ +HGY V+ D +V+ +++ MYSKC A
Sbjct: 215 ARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVI-SALFSMYSKCHSTEDA 273
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
+LF ++ +D++SW +I Y G EA+ LF +M+E+ ++PD + LLS L +S
Sbjct: 274 CSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNS 333
Query: 392 GLVEEGRYWFDLMVSK 407
G V G+ + +++ +
Sbjct: 334 GNVHGGKAFHAVIMKR 349
>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like, partial [Cucumis sativus]
Length = 670
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 273/462 (59%), Gaps = 4/462 (0%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ M+ + P + T +++C + +L G+ + + G D V ++++++Y
Sbjct: 210 LFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYC 269
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
K G + A FE M ++LV W+ MI+G V NG E + ++++ + + D ++
Sbjct: 270 KSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVS 329
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
LIQ C+ D G +HG+ RR L+L++ + T++VD+YAK G L AS VF+ M N
Sbjct: 330 LIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKN 389
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+++W A++ G AQNG A L+L +MQ+ ++++LVS + C +G L+ G+S+H
Sbjct: 390 VISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHA 449
Query: 303 YTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQ-MQSRDLISWNVIIASYGIHGHG 359
T+ RF F +V+ T++IDMY+KC + A +F + +D+I +N +I+ YG+HG G
Sbjct: 450 -TLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLG 508
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+AL ++ +M ++P+ STF SLLSA SHSGLVEEG F MV + PT+K YAC
Sbjct: 509 HKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYAC 568
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
+VDLL+RAG + +A ++++ M P + LL+GC HK +G K+A ++L L +
Sbjct: 569 IVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRN 628
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
I+ +SN +A +W+ V VR M + +KK+PGYS +E
Sbjct: 629 PSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 670
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 245/485 (50%), Gaps = 46/485 (9%)
Query: 1 MIKTNLSAYGNS--VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+I TN YG+ V +++A Y + +ARK+F+E+P N+++ Y + E
Sbjct: 79 IIITN-PIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYN 137
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ + L M + + DS T ALKAC+ L+D +MG E+ AV G F+GSS+L
Sbjct: 138 DCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSIL 197
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
N G RE + + M I+ V
Sbjct: 198 NF---------------------------------LEGLFREGYNLFLDMLYNKIEPSAV 224
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M+ LIQ+C ++ + FG +HG+ + ++ D +V T+L+DMY K+G ++ A +F+NM
Sbjct: 225 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 284
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLME--MQSCGFEPDSVSLVSALLACAQIGFLKL 296
N+V+W +ISG+ QNGL TL L + M GF DS ++VS + C++ L
Sbjct: 285 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGF--DSGTVVSLIQLCSRTADLDG 342
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GK +HG+ RR D NLVL T+++D+Y+KCG + A ++F++M+++++ISW ++
Sbjct: 343 GKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQ 402
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+GH +AL LF QM V + T SL+ + GL+ EGR ++++
Sbjct: 403 NGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRS-VHATLTRFHFASEVV 461
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCH--NHKKFSIGEKVAKK 471
++D+ A+ ++ A + T + ++ +++S G H HK + ++ ++
Sbjct: 462 VMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNRE 521
Query: 472 VLKLN 476
L+ N
Sbjct: 522 GLQPN 526
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 179/332 (53%), Gaps = 15/332 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ SAR +FE +P R + ++N +I Y + E L L+ ++I +DV D
Sbjct: 264 LIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFD 323
Query: 76 SSTFTVALKACVSLMDLKMGE----EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
S T ++ C DL G+ I+R+ ++L ++ + +++++LY KCG + A
Sbjct: 324 SGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDL----NLVLPTAIVDLYAKCGSLAYAS 379
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
FE+M+ K+++ W++M+ GL NG R+A+ + +M+ E + + + ++ L+ C LG
Sbjct: 380 SVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLG 439
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK-NMSRINIVTWGALI 250
R G SVH R H +V V T+L+DMYAK ++ A VFK ++ +++ + ++I
Sbjct: 440 LLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI 499
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF 310
SG+ +GL L + M G +P+ + VS L AC+ G ++ G ++ V+ D
Sbjct: 500 SGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVK--DH 557
Query: 311 NLV----LGTSVIDMYSKCGVPSCARALFDQM 338
N L ++D+ S+ G A L +QM
Sbjct: 558 NTTPTDKLYACIVDLLSRAGRLRQAEELINQM 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 41/289 (14%)
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYS-----IRRHLNLDVKVQTSLVDMYAKTGH 227
+ +EV M+ + DLGD L S I + D + LV Y+ G
Sbjct: 45 LTGNEVSMVEQKKIGNDLGDCSICLDELSPSNREIIITNPIYGDQFLVAKLVAAYSSLGC 104
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L+ A VF + + V A+++G+ QN +ELL M C E DS + AL A
Sbjct: 105 LENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKA 164
Query: 288 CAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C + ++G + G V + LG+S+++
Sbjct: 165 CMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNF------------------------- 199
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+ G E +LFL M+ ++P T SL+ + + G+ ++
Sbjct: 200 --------LEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLG 251
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ + + ++D+ ++G+VE A I ++M + L W ++SG
Sbjct: 252 -FGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSR-NLVSWNVMISG 298
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 280/543 (51%), Gaps = 30/543 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELP-LRGVDTYNSIIIAYSRKESPFEV 60
IKT + V ++ +Y I+ A LFE P R + +++ YS+ +
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKA 224
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ + M E + + TF L AC S+ G ++ V G+G +VFVGS+++++
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDM 284
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++ A E M+ D V W+SMI G V G EA+ ++ M + DE
Sbjct: 285 YSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY 344
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
++ + + D R +SVH ++ V +LVDMYAK G+ D A VF+ M+
Sbjct: 345 PSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTD 404
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
++++W +L++G NG L L EM+ G PD + + + L ACA++ L+ GK +
Sbjct: 405 KDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQV 464
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ +L + S++ MY+KCG A +FD M+ +D+I+W +I Y +G G
Sbjct: 465 HANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRG 524
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ H+GLVE GR +F M Y I+P +HYAC
Sbjct: 525 RD----------------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYAC 556
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
M+DLL R+G++ EA ++++ M+ +P VW ALL+ C H +GE+ A + +L P +
Sbjct: 557 MIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKN 616
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY 539
+ L+SN ++ KWEE A R+ M+ G+ K PG S +E++ ++H F+ ED+SH +
Sbjct: 617 AVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRT 676
Query: 540 EDI 542
+I
Sbjct: 677 AEI 679
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 201/403 (49%), Gaps = 28/403 (6%)
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
RK ++ D ++M+ Y G++NEA F + + + WSS+I+G G
Sbjct: 61 RKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDV 120
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
EA++ + M+ EG ++ +++ C+ G +H ++I+ + + V T LV
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLV 180
Query: 220 DMYAKTGHLDLASHVFK-NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
DMYAK + A ++F+ + N V W A+++G++QNG +E +M+ G E +
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQ 240
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+ S L AC I G +HG VR F N+ +G++++DMYSKCG S AR + +
Sbjct: 241 FTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLET 300
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-------- 389
M+ D +SWN +I G GEEALSLF M +K D T+ S+L+ S
Sbjct: 301 MEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNA 360
Query: 390 ---HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
HS +V+ G YK+ +VD+ A+ G + A + + M T+ +
Sbjct: 361 MSVHSLIVKTG-------FEAYKLVNNA-----LVDMYAKRGYFDYAFDVFEKM-TDKDV 407
Query: 447 AVWVALLSGCHNHKKFSIGEKV--AKKVLKLNPDDLGIHALVS 487
W +L++GC ++ + ++ +++ ++PD + I A++S
Sbjct: 408 ISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 450
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 83/160 (51%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT AY ++ +Y + A +FE++ + V ++ S++ S E
Sbjct: 367 IVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 426
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M + PD L AC L L+ G+++ ++ G G+ + V +S++++
Sbjct: 427 LRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSM 486
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
Y KCG + +A F+ M+ +D++ W+++I G NG+ R+
Sbjct: 487 YAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD 526
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 36/171 (21%)
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG----------------------- 354
V+ SKCG AR LFD M RD SWN +I +Y
Sbjct: 47 VLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITW 106
Query: 355 --------IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+G EAL LF +M +P+ T+ S+L S L+E+G+ +
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGK---QIHAH 163
Query: 407 KYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
K Q + +VD+ A+ + EA + + + +W A+++G
Sbjct: 164 AIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG 214
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 298/546 (54%), Gaps = 5/546 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+ L + + ++ +Y AR++F ++ + ++NS+I + ++ E +
Sbjct: 931 VKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESV 990
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+ ++ E ++PD T L+AC SL+D L + +I A++ G D FV ++++++
Sbjct: 991 NLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDV 1050
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K GKM EA F+ DL CW++M+ G + ++A++ + + K G +D++ +
Sbjct: 1051 YSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITL 1110
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+AC L G +H ++I+ + D+ V + ++DMY K G + A VF +S
Sbjct: 1111 ATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA 1170
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+ V W ++ISG NG L + M+ PD + + + A + + L+ G+ +
Sbjct: 1171 PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQL 1230
Query: 301 HGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
H V + D + +GTS++DMY+KCG A LF +M R++ WN ++ HG+
Sbjct: 1231 HA-NVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGN 1289
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EEA++LF M ++PD +F +LSA SH+GL E + M + Y I+P +HY+
Sbjct: 1290 AEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYS 1349
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
C+VD L RAG V+EA K++++M + ++ ALL C G++VA ++ L P
Sbjct: 1350 CLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF 1409
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
D + L+SN +A +W++V RK M++ +KK PG+S ++V LH F+++D+SH Q
Sbjct: 1410 DSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQ 1469
Query: 539 YEDIVY 544
DI+Y
Sbjct: 1470 -ADIIY 1474
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 207/389 (53%), Gaps = 8/389 (2%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T V L A DL++G+++ AV+ G +DV V +S++N+Y K G A F
Sbjct: 903 DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 962
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS- 193
M+ DL+ W+SMI+ + E+V+ + + EG+ D + +++AC+ L D
Sbjct: 963 NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGL 1022
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+H ++++ D V T+L+D+Y+K+G ++ A +F+N +++ W A++ G+
Sbjct: 1023 NISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGY 1082
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
LEL + G + D ++L +A AC + L GK IH + ++ FD +L
Sbjct: 1083 IIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 1142
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ + ++DMY KCG A +F+ + + D ++W +I+ +G+ ++AL ++ +M ++
Sbjct: 1143 HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 1202
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEV 430
V PD TFA+L+ A S +E+GR L + K+ + +VD+ A+ G +
Sbjct: 1203 RVMPDEYTFATLIKASSCVTALEQGR---QLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 1259
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNH 459
E+A ++ M+ +A+W A+L G H
Sbjct: 1260 EDAYRLFKKMNVR-NIALWNAMLVGLAQH 1287
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 227/528 (42%), Gaps = 93/528 (17%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAY-----SRKESPFEVLGLYNQMIKE 70
++ +Y + SAR++F+ P R + T+N+I+ AY S + E L L+ +
Sbjct: 662 LLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRAS 721
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS-------------- 116
T LK C++ L E + A+++G DVFV +
Sbjct: 722 LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA 781
Query: 117 -----------------MLNLYVKCGKMNEAMVAFEKMQRK------------------- 140
ML YV+ G EA F + R
Sbjct: 782 RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV 841
Query: 141 --------------------------DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
D+ CW+ ++ ++ G A++ + M ID
Sbjct: 842 NWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNID 901
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
D V ++ ++ A A D G VHG +++ L+ DV V SLV+MY+K G A V
Sbjct: 902 YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ-IGF 293
F +M +++++W ++IS AQ+ L ++ L +++ G +PD +L S L AC+ I
Sbjct: 962 FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG 1021
Query: 294 LKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L + + IH + ++ + + + T++ID+YSK G A LF DL WN ++
Sbjct: 1022 LNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y I G++AL LF + ++ K D T A+ A L+++G+ + + I+
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK-----QIHAHAIKA 1136
Query: 413 ---TEKHY-ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
++ H + ++D+ + G++ A IV + + P W +++SGC
Sbjct: 1137 GFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGC 1183
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ +S +L +G+ + V G D F+ +++L +Y KCG ++ A F+ +DL
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687
Query: 143 VCWSSMINGLVF-----NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
V W++++ +G +E + ++ ++ + + +++ C + G
Sbjct: 688 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 747
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG 257
VHGY+I+ L DV V +LV++Y+K G + A +F M ++V W ++ G+ Q G
Sbjct: 748 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 807
Query: 258 LAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
L +L E G PD S+ L +++ +
Sbjct: 808 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNW 843
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 101/195 (51%), Gaps = 7/195 (3%)
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA-----QNGLAGSTLELLME 268
+ +L+ MY+K G L A VF ++VTW A++ +A +G A L L
Sbjct: 658 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRL 717
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
+++ ++L L C G L + +HGY ++ ++++ + +++++YSKCG
Sbjct: 718 LRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGR 777
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
AR LFD M+ RD++ WN+++ Y G +EA LF + + ++PD + +L+
Sbjct: 778 MRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 837
Query: 388 LSHSGLVEEGRYWFD 402
+S +EG++ D
Sbjct: 838 VSEVNW-DEGKWLAD 851
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 287/533 (53%), Gaps = 40/533 (7%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I A +F + ++ V T+N ++ Y++ + L + M +E +R D T + L
Sbjct: 307 IEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAV 366
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
DL +G + V+ + DV V S ++++Y KCG+M+ A F +++KD+V W
Sbjct: 367 AADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLW 426
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++M+ G EA+ + +M+ E + + V LI FG
Sbjct: 427 NTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLI----------FG--------- 467
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR----INIVTWGALISGFAQNGLAGS 261
+ K G + A ++F M N++TW ++SG QNG
Sbjct: 468 ----------------FFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSG 511
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
+ + EMQ G P+S+S+ SAL C + LK G++IHGY +RR ++ + TS++D
Sbjct: 512 AMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMD 571
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY+KCG A+ +F +++L +N +I++Y HG EAL LF QM + + PDH T
Sbjct: 572 MYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHIT 631
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+LSA SH GL++EG F MVS+ +++P+E+HY C+V LLA G+++EAL+ + +M
Sbjct: 632 LTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTM 691
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
+ P + +LL+ C + + + +AK +LKL+PD+ G + +SN +A KW++V+
Sbjct: 692 PSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVS 751
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+R M++ G++K+PG S +EV ELH FI D+SH + E+I L L EM
Sbjct: 752 NLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 270/548 (49%), Gaps = 23/548 (4%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +++ LY A +LF + P V ++ +II ++R E L Y +M ++ +
Sbjct: 91 ISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGL 150
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAM 131
PD+ LKAC L ++ G+ + V+ +G V+V +S++++Y KCG + +A
Sbjct: 151 PPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAG 210
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD-- 189
F++M ++ V W+SM+ NG +EA+ ++ M+ +G++ V + G ACA+
Sbjct: 211 KVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSE 270
Query: 190 -LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
+G+ R G HG ++ L LD + +S+++ Y K G ++ A VF+NM+ ++VTW
Sbjct: 271 AVGEGRQG---HGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNL 327
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
+++G+AQ G+ LE+ M+ G D V+L + L A L LG H Y V+
Sbjct: 328 VVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKND 387
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
F+ ++V+ + +IDMY+KCG CAR +F ++ +D++ WN ++A+ G EAL LF
Sbjct: 388 FEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFF 447
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
QM V P+ ++ SL+ +G V E R F M S + P + M+ L +
Sbjct: 448 QMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSS-GVMPNLITWTTMMSGLVQN 506
Query: 428 GEVEEALKIVDSMS---TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
G A+ + M P + LSGC + G + V++ + IH
Sbjct: 507 GFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQ-SIH- 564
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
++++ M K + G + + K++ Y +A I SH Q + +
Sbjct: 565 IITSIMDMYAKCGSLDGAKCVFKMCSTKELYVY---------NAMISAYASHGQAREALV 615
Query: 545 VLKKLYLE 552
+ K++ E
Sbjct: 616 LFKQMEKE 623
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 223/478 (46%), Gaps = 42/478 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + A K+F+E+ R T+NS+++ Y++ E + ++ +M + V
Sbjct: 196 LVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVT 255
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ AC + + G + AV G D +GSS++N Y K G + EA V F
Sbjct: 256 LVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFR 315
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M KD+V W+ ++ G G +A++ M++EG+ D V + L+ AD D
Sbjct: 316 NMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVL 375
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ H Y ++ DV V + ++DMYAK G +D A VF + + +IV W +++ A+
Sbjct: 376 GMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAE 435
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
GL+G L+L +MQ P+ VS S + GF K G+
Sbjct: 436 QGLSGEALKLFFQMQLESVPPNVVSWNSLIF-----GFFKNGQVAE-------------- 476
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSR----DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
AR +F +M S +LI+W +++ +G G A+ +F +M +
Sbjct: 477 ---------------ARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQD 521
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
++P+ + S LS + L++ GR ++ + Q + M D+ A+ G ++
Sbjct: 522 VGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIM-DMYAKCGSLD 580
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
A K V M + L V+ A++S +H + + K++ K + PD + + +++S
Sbjct: 581 GA-KCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLS 637
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 196/402 (48%), Gaps = 6/402 (1%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG--YGNDVFVGSS 116
E + QM ++ + + L+ CV L + ++ ++ G + + FV S
Sbjct: 34 EAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISK 93
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++ LY KCG A F ++ W+++I G EA+ Y +M+++G+ D
Sbjct: 94 LVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPD 153
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
V+ +++AC L RFG VH + ++ L V V TSLVDMY K G ++ A VF
Sbjct: 154 NFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVF 213
Query: 236 KNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
MS N VTW +++ +AQNG+ + + EM+ G E V+L ACA +
Sbjct: 214 DEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVG 273
Query: 296 LGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+ HG V + + VLG+S+++ Y K G+ A +F M +D+++WN+++A Y
Sbjct: 274 EGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYA 333
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
G E+AL + M E ++ D T ++LL+ + + + G V K +
Sbjct: 334 QFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCV-KNDFEGDV 392
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+ ++D+ A+ G ++ A ++ S + + +W +L+ C
Sbjct: 393 VVSSGIIDMYAKCGRMDCARRVF-SCVRKKDIVLWNTMLAAC 433
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 157/320 (49%), Gaps = 9/320 (2%)
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR--HLN 209
L +G+ REAV++ +M + + L+Q C L +H I+R
Sbjct: 26 LCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFA 85
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
L+ V + LV +YAK G + A+ +F++ N+ +W A+I + G L ++M
Sbjct: 86 LNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKM 145
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDMYSKCGV 327
Q G PD+ L + L AC + +++ GK +H + V+ + + TS++DMY KCG
Sbjct: 146 QQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGA 205
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A +FD+M R+ ++WN ++ +Y +G +EA+ +F +M V+ + +A
Sbjct: 206 VEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTA 265
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
++S V EGR L V ++ + +++ + G +EEA + +M+ + +
Sbjct: 266 CANSEAVGEGRQGHGLAVVG-GLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKD-VV 323
Query: 448 VWVALLSGCHNHKKFSIGEK 467
W +++G + +F + EK
Sbjct: 324 TWNLVVAG---YAQFGMVEK 340
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ +LS + + I+ +Y + A+ +F+ + + YN++I AY+ E
Sbjct: 554 VMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREA 613
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
L L+ QM KE + PD T T L AC +K G ++++ V
Sbjct: 614 LVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMV 656
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 248/428 (57%), Gaps = 7/428 (1%)
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D +SS+ G P A+ Y+ + + + +ACADL R G++VH
Sbjct: 69 DSFLFSSLARAATHQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVH 128
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+SI D V T+LV +Y+K G L +A +F + N+V W A+ISG+ QNGLA
Sbjct: 129 AHSILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAE 188
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVI 319
+E+ EM+ PDS++ V+ L ACAQ G L LG+ + V R D ++ LG++++
Sbjct: 189 QGIEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALV 248
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
+MY++CGV AR FD +Q R++++W +IA YG+HGHG EA+ L+ M P+
Sbjct: 249 NMYARCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDV 308
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV-D 438
TF ++LSA +H+GL+ EGR F M Y + P +HY MVD+ RAG +EEA++ + D
Sbjct: 309 TFVAVLSACAHAGLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRD 368
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
SM +PG VW A+L C HK FS+G +VA+++++L P++ H L+SN +A+ K
Sbjct: 369 SMPGDPGPEVWTAILGACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGKMYH 428
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISS 558
V VR TM K +KK GYS++E+ G H F M +KSH + +I L++L + A
Sbjct: 429 VEKVRNTMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQKTREIYQYLEELVHRISA--- 485
Query: 559 WLQGHMEE 566
G+M E
Sbjct: 486 --AGYMPE 491
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 178/360 (49%), Gaps = 32/360 (8%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
++S+ A + + P L Y ++ + S FT KAC L L+ G + ++
Sbjct: 73 FSSLARAATHQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVHAHSI 132
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
LG+G+D FV ++++ LY KCG++ A F+ ++ K++V W++MI+G NG + ++
Sbjct: 133 LLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQGIE 192
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
YK MK D + + + ACA G G V + +++ V + ++LV+MYA
Sbjct: 193 VYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNMYA 252
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
+ G +D A F + N+VTW ++I+G+ +G ++L M+ G P+ V+ V+
Sbjct: 253 RCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVA 312
Query: 284 ALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
L ACA G + G K ++G R + S++DMY + G L +
Sbjct: 313 VLSACAHAGLITEGRDAFACMKRVYGLAPRVEHY-----CSMVDMYGRAG------RLEE 361
Query: 337 QMQS-RDLIS-------WNVIIASYGIHGHGEEALSLFLQMIETMVK--PDHSTFASLLS 386
MQ RD + W I+ + +H + SL +++ E +++ P++ ++ LLS
Sbjct: 362 AMQFIRDSMPGDPGPEVWTAILGACKMH----KNFSLGVEVAERLIRLEPENPSYHVLLS 417
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARKLF+ + + V +N++I Y + + + +Y +M PD
Sbjct: 146 LVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQGIEVYKEMKVAKAVPD 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L AC L +G E+ R+ V VF+GS+++N+Y +CG +++A F+
Sbjct: 206 SMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNMYARCGVVDKARQWFD 265
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q +++V W+SMI G +G EA+ Y M+ +G ++V + ++ ACA G
Sbjct: 266 VLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVLSACAHAGLITE 325
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKN 237
G ++R L +V+ S+VDMY + G L+ A ++
Sbjct: 326 GRDAFA-CMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRD 368
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 286/527 (54%), Gaps = 2/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+ + + T+NS++ YS + E + L+ ++ ++P TF L A V
Sbjct: 194 ASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D K G+++ ++ + +VFVG+++L+ Y K +++E F +M D + ++ +
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVV 313
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I +NGQ +E+ D +++++ D + L+ + R G +H +I
Sbjct: 314 ITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGA 373
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
N + +V+ +LVDMYAK A +F N++ + V W A+IS + Q G + + +
Sbjct: 374 NFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G D + S L ACA + + LG+ +H +R F N+ G++++D Y+KCG
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGC 493
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ A F +M R+ +SWN +I++Y +G+ + L+ F QMI++ KPD +F S+LSA
Sbjct: 494 MTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH G VEE + F+ M Y++ P +HY MVD+L R G +EA K++ M EP
Sbjct: 554 CSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEI 613
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKL-NPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ++L+ C HK + +K A ++ + + D + +SN +A+ +W+ VA V+K M
Sbjct: 614 MWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAM 673
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
R G++KVP YS VE+ + H F DKSH + + I+ + L EM
Sbjct: 674 RDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEM 720
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 202/428 (47%), Gaps = 3/428 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+ + R ++ +I Y + E LY M + + PD T L
Sbjct: 93 ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE 152
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L + +I ++LGY ++ V +S+++ Y K + A F+ M KD V ++S+
Sbjct: 153 LETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSL 212
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ G G EA++ + + GI + L+ A L D++FG VHG+ ++ +
Sbjct: 213 MTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF 272
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V +L+D Y+K +D +F M ++ +++ +I+ +A NG + +L +
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
+Q F+ + L L++G+ IH + +F + +++DMY+KC
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A+ +FD + + + W +I++Y G EE +++F M T V D +TFAS+L A
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
++ + GR L++ + + ++D A+ G + +A+K M ++
Sbjct: 453 CANLASISLGRQLHSLLI-RSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 448 VWVALLSG 455
W AL+S
Sbjct: 512 -WNALISA 518
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 21/374 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVS-ARKLFEELP-LRGVDTYNSIIIAYSRKESPF 58
++KTN + VG + Y K+D V KLF E+P L G+ +YN +I +Y+
Sbjct: 267 VLKTNF-VWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGI-SYNVVITSYAWNGQFK 324
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
E L+ ++ + R D F A L S ++L+MG +I +A+ +G + V ++
Sbjct: 325 ESFDLFRKL--QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENA 382
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++++Y KC EA F+ + K V W++MI+ V G+ E ++ + M++ G+ AD
Sbjct: 383 LVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPAD 442
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ +++ACA+L G +H IR +V ++L+D YAK G + A F
Sbjct: 443 QATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFG 502
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M N V+W ALIS +AQNG TL +M G++PDSVS +S L AC+ GF++
Sbjct: 503 EMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEE 562
Query: 297 G-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNV 348
I+ T +R + TS++D+ + G A L +M I W+
Sbjct: 563 ALWHFNSMTQIYEVTPKREHY-----TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 349 IIASYGIHGHGEEA 362
++ S IH + E A
Sbjct: 618 VLNSCRIHKNHELA 631
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 179/340 (52%), Gaps = 3/340 (0%)
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
M++ ++K GK+++A F+ M + V W+ +I G + + Q +EA Y M++ GI+ D
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
V ++ L+ +L + +H + I+ ++ V SLVD Y KT L LAS +FK
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+M + VT+ +L++G++ GL +EL +E+ + G +P + + L A + K
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ +HG+ ++ F +N+ +G +++D YSK LF +M D IS+NV+I SY
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G +E+ LF ++ T FA+LLS + S + GR ++ +
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A +VD+ A+ +EA KI D+++ + + W A++S
Sbjct: 380 ENA-LVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISA 417
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLGTSVIDM----YSKCGVPSCARALFDQMQSRDLISWN 347
FL+ G +H + V FD T ++M + K G S AR LFD M R +SW
Sbjct: 52 NFLERGDLVHAHQV--FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEE 396
++I Y +EA L+ M ++PD+ T +LLS H+ +++
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 397 GRYWFDLMV 405
G Y ++LMV
Sbjct: 170 G-YEYNLMV 177
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 292/517 (56%), Gaps = 7/517 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V + ++Y + A LF EL + V ++ +I AY R+ E + L+ +M + +
Sbjct: 259 VSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGL 318
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD + L S ++ G+ + +G+ V + +S++++Y K ++ A
Sbjct: 319 QPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGT 378
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID---ADEVVMMGLIQACAD 189
F + ++D WS M+ G G + ++ Y++M+ D D ++ I +C+
Sbjct: 379 VFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSR 438
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
LG R G SVH YSI+ L+ + + SL+ MY + G+ +LA +F R ++VTW A
Sbjct: 439 LGRLRLGQSVHCYSIKCLLD-ENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNA 497
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR- 307
LIS ++ G + L L +M + +P+S +L++ + ACA + L+ G+ +H Y
Sbjct: 498 LISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMG 557
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ ++ + T+++DMY+KCG AR +FD M RD+++WNV+I+ YG+HG +AL LF
Sbjct: 558 LESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFS 617
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M +KP+ TF ++LSA H+GLV+EGR F + + Y+++P KHYACMVDLL ++
Sbjct: 618 EMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLF-IRMGGYRLEPNLKHYACMVDLLGKS 676
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G ++EA +V +M +P VW LLS C H F +G +VAKK +P + G + L+S
Sbjct: 677 GLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMS 736
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
N + +KW+E+ +R TM+ G++K G+S V+V G
Sbjct: 737 NSYGSAEKWDEIEKLRDTMKNYGVEKGVGWSAVDVWG 773
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 244/483 (50%), Gaps = 14/483 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK----ED 71
++ +Y + A KLF+E+ R V + +++ R + + QMI+
Sbjct: 157 LVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSG 216
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP+S T L+AC L +L G + AV+ G + V S++ ++Y KC +A
Sbjct: 217 ARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDAC 276
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F ++ KD+V W+ +I G REAV+ ++ M++ G+ DEV++ ++
Sbjct: 277 ILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSA 336
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+ G + H IRR+ V + SL+ MY K +D+A VF + + + +W +++
Sbjct: 337 NVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVA 396
Query: 252 GFAQNGLAGSTLELLMEMQSCG----FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
G+ + GL LEL +MQ C F D SLVSA+ +C+++G L+LG+S+H Y+++
Sbjct: 397 GYCKAGLDVKCLELYRQMQ-CRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKC 455
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLF 366
+ S+I MY +CG A +F + RD+++WN +I+SY G +ALSL+
Sbjct: 456 LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLY 515
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
QM+ VKP+ ST +++SA ++ +E G V ++ +VD+ +
Sbjct: 516 GQMLTEDVKPNSSTLITVISACANLAALEHGELLHS-YVKNMGLESDVSISTALVDMYTK 574
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHA 484
G++ A I DSM + + W ++SG H + + K+ ++ + P+ L A
Sbjct: 575 CGQLGTARGIFDSM-LQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLA 633
Query: 485 LVS 487
++S
Sbjct: 634 ILS 636
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 210/466 (45%), Gaps = 21/466 (4%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
+ LS+ + ++++ Y A F P +NS++ ++ L
Sbjct: 41 SGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDFDSALSA 100
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY---GNDVFVGSSMLNL 120
+ +M RP T +A A L L +G + +V+ G V V SS++ +
Sbjct: 101 HRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYM 160
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK----EGIDAD 176
Y +CG + +A+ F++M +D+V W+++++G V NG+ + + +M + G +
Sbjct: 161 YARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPN 220
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
M ++AC LG+ G +HGY+++ + V ++L MY+K + A +F
Sbjct: 221 SRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFP 280
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
++ ++V+W LI + + GLA +EL EM+ G +PD V + L +
Sbjct: 281 ELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNR 340
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
GK+ H +RR F ++++ S+I MY K + A +F + RD SW++++A Y
Sbjct: 341 GKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCK 400
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTF----ASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
G + L L+ Q M DH F SL+SA+S + GR V Y I+
Sbjct: 401 AGLDVKCLELYRQ----MQCRDHDEFLCDITSLVSAISSCSRL--GRLRLGQSVHCYSIK 454
Query: 412 PTEKHYA---CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
+ ++ + R G E A KI + W AL+S
Sbjct: 455 CLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALIS 500
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 183/367 (49%), Gaps = 16/367 (4%)
Query: 9 YGNSV---GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYN 65
+G+SV +I++YG + A +F L R ++++ ++ Y + + L LY
Sbjct: 353 FGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYR 412
Query: 66 QMIKED---VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
QM D D ++ A+ +C L L++G+ + +++ ++ + +S++ +Y
Sbjct: 413 QMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLL-DENSITNSLIGMYG 471
Query: 123 KCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+CG A F + R+D+V W+++I+ G+ +A+ Y +M E + + ++
Sbjct: 472 RCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLI 531
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I ACA+L G +H Y L DV + T+LVDMY K G L A +F +M +
Sbjct: 532 TVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQR 591
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
++VTW +ISG+ +G A L+L EM++ +P+S++ ++ L AC G + G+ +
Sbjct: 592 DVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLF 651
Query: 302 ----GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIH 356
GY R + NL ++D+ K G+ A L M + D W ++++ +H
Sbjct: 652 IRMGGY---RLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVH 708
Query: 357 GHGEEAL 363
+ E L
Sbjct: 709 DNFEMGL 715
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 10/265 (3%)
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
L +H + L+ LV Y+ +G A+ F + W +L+
Sbjct: 32 LRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCA 91
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR----RFDFNL 312
S L M++ G P + A A A++ L +G S+H Y+V+ D ++
Sbjct: 92 SDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSV 151
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-- 370
+ +S++ MY++CG A LFD+M RD+++W +++ +G + + +QMI
Sbjct: 152 AVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRL 211
Query: 371 --ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
++ +P+ T S L A G + GR V K I+ + + + ++
Sbjct: 212 AGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAV-KEGIRDCALVVSALFSMYSKCD 270
Query: 429 EVEEALKIVDSMSTEPGLAVWVALL 453
E+A + + TE + W L+
Sbjct: 271 MTEDACILFPEL-TEKDVVSWTGLI 294
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 9/175 (5%)
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
R DF ++ YS G+P A F D WN ++ S+ + ALS
Sbjct: 46 RPDF----AAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDFDSALSAH 101
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC---MVDL 423
+M + +P T SA + + G V K+ + + A +V +
Sbjct: 102 RRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSV-KFGLLAGDGSVAVSSSLVYM 160
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
AR G + +A+K+ D M E + W A++SGC + + G ++++L D
Sbjct: 161 YARCGSLGDAVKLFDEM-VERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGD 214
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 298/544 (54%), Gaps = 2/544 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++ + L G+ ++++Y A KLF + T+N +I Y + E
Sbjct: 261 VVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEES 320
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + +MI V PD+ TF+ L + +L+ +I + D+F+ S++++
Sbjct: 321 LIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDA 380
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC ++ A F + D+V +++MI+G + NG +A++ ++ + K I +E+ +
Sbjct: 381 YFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITL 440
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ L + G +HG+ I++ + + +++DMYAK G ++LA +F +S+
Sbjct: 441 VSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK 500
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IV+W ++I+ AQ+ + +++ +M G D VS+ +AL ACA + GK+I
Sbjct: 501 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAI 560
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
HG+ ++ ++ +++IDMY+KCG A +FD M+ ++++SWN IIA+YG HG
Sbjct: 561 HGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKL 620
Query: 360 EEALSLFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+++L LF +M+E + +PD TF ++S H G V+EG +F M Y IQP ++HYA
Sbjct: 621 KDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYA 680
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
C+VDL RAG + EA + V SM P VW LL HK + + + +++ L+P
Sbjct: 681 CVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPW 740
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L+SN A +WE V VR M++ ++K+PGYS +E+N H F+ D +H +
Sbjct: 741 NSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPE 800
Query: 539 YEDI 542
I
Sbjct: 801 SSHI 804
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 223/445 (50%), Gaps = 5/445 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
RI+ +Y + K+F L R + +NSII ++ R + L Y +M+ V
Sbjct: 71 RILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGV 130
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD STF +KACV+L + K E + LG + FV SS++ Y++ GK++ A
Sbjct: 131 SPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGK 190
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+++ +KD V W+ M+NG G + + M+ + I + V ++ CA
Sbjct: 191 LFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLL 250
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +HG + L+ + ++ SL+ MY+K G D A +F+ MSR + VTW +ISG
Sbjct: 251 IDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISG 310
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ Q+GL +L EM S G PD+++ S L + ++ L+ + IH Y +R +
Sbjct: 311 YVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLD 370
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ L +++ID Y KC S A+ +F Q S D++ + +I+ Y +G +AL +F +++
Sbjct: 371 IFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVK 430
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ P+ T S+L + ++ GR ++ K A ++D+ A+ G +
Sbjct: 431 VKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCA-VIDMYAKCGRMN 489
Query: 432 EALKIVDSMSTEPGLAVWVALLSGC 456
A +I +S + W ++++ C
Sbjct: 490 LAYEIFGRLSKR-DIVSWNSMITRC 513
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRI 241
L+Q C++L R G VH + I ++ D ++ MYA G +F + SR+
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 242 -NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I W ++IS F + GL L +M G PD + + AC + K G
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIEF 155
Query: 301 HGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
TV D N + +S+I Y + G A LFD++ +D + WNV++ Y G
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGA 215
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL-MVSKYKIQPTEKHY 417
+ + F M + P+ TF +LS + L++ G L +VS + + K+
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKN- 274
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + ++ G ++A+K+ MS W ++SG
Sbjct: 275 -SLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNCMISG 310
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 271/520 (52%), Gaps = 5/520 (0%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA--CVSLMDLKMGEEI 98
V ++ + I ++ P L + M++ +RP+ TF A KA C +G +I
Sbjct: 76 VVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQI 135
Query: 99 WRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
A+ GY D FV + +++Y K G + A FE+M ++++ W++++ V +G+
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
P E AY +++ G + V + ACA G HG+ + ++DV V +
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNA 255
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
+VD Y K A VF M N V+W ++I +AQ+G L + M ++ G EP
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPT 315
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
+ S L CA + L G+++H VR D N+ + ++++DMY KCG A +F
Sbjct: 316 DFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFL 375
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVE 395
M R+L++WN +I Y G + AL++F MI + P+H T ++++A S GL +
Sbjct: 376 DMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTK 435
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+G FD M ++ ++P +HYAC+VDLL RAG E A +I+ M P ++VW ALL
Sbjct: 436 DGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGA 495
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C H K +G ++K+ +L+P D G H L+SN A +W E VRK M+ G+KK P
Sbjct: 496 CKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEP 555
Query: 516 GYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
G S + +H F +D H++ +I +L KL +M+A
Sbjct: 556 GCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQA 595
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 7/386 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D A +A +S ++G +A+ L G F+ + ++NLY K A A
Sbjct: 8 DPQLLGAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASA 67
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ--ACADLG 191
+V +++ I+G + +P A+ A+ M + G+ ++ + ACA
Sbjct: 68 LASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPR 127
Query: 192 DSRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
S G +H ++R +L D V + +DMY KTG L LA +F+ M N++ W A++
Sbjct: 128 CSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVM 187
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
+ +G T + ++ G P+ VS+ + ACA FL LG+ HG+ V FD
Sbjct: 188 TNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFD 247
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
++ + +++D Y KC ARA+FD M+ R+ +SW +I +Y HG E+AL++++
Sbjct: 248 MDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGA 307
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
T +P +S+L+ + + GR + V + I + +VD+ + G
Sbjct: 308 RNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAV-RSCIDANIFVASALVDMYGKCGG 366
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
VE+A ++ M E L W A++ G
Sbjct: 367 VEDAEQVFLDMP-ERNLVTWNAMIGG 391
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 288/524 (54%), Gaps = 4/524 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A+++FE + ++ + ++SII AY+R + LY +MI E V P+
Sbjct: 51 LLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPN 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF AL C S+ L G I ++ + D + S+LN+Y+KC +M EA FE
Sbjct: 111 VVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFE 170
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSR 194
M+ +++ +++MI+ V G+ EA++ + RM K E I+ + ++ A LG+
Sbjct: 171 GMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLE 230
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH + R + +V VQ +LV MY K G A VF +M+ N+++W ++I+ +A
Sbjct: 231 KGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYA 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
Q+G L L M EP VS SAL ACA +G L G+ IH V + +
Sbjct: 291 QHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQM 347
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
TS++ MY++CG AR +F++M++RD S N +IA++ HG ++AL ++ +M + +
Sbjct: 348 ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGI 407
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
D TF S+L A SH+ LV + R +F +V + + P +HY CMVD+L R+G + +A
Sbjct: 408 PADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAE 467
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++V++M + W+ LLSGC H + GE+ A+KV +L P + + +SN +A +
Sbjct: 468 ELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAK 527
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
++++ VRK M + G+ S +E++ ELH F + Q
Sbjct: 528 RFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQ 571
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 198/375 (52%), Gaps = 7/375 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T + AC L L+ G + + G+ D+ + +++L +Y KCG +++A F
Sbjct: 9 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E M+ KDL WSS+I+ G+ AV Y+RM EG++ + V + CA +
Sbjct: 69 EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLA 128
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G ++H + + D +Q SL++MY K + A VF+ M N+ ++ A+IS +
Sbjct: 129 DGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYV 188
Query: 255 QNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q G LEL M EP++ + + L A +G L+ G+ +H + R FD N+
Sbjct: 189 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 248
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
V+ +++ MY KCG P AR +FD M +R++ISW +IA+Y HG+ +EAL+LF +M
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD-- 306
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P +F+S L+A + G ++EGR +V + P + ++ + AR G +++
Sbjct: 307 -VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASP--QMETSLLSMYARCGSLDD 363
Query: 433 ALKIVDSMSTEPGLA 447
A ++ + M T +
Sbjct: 364 ARRVFNRMKTRDAFS 378
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 260/439 (59%), Gaps = 5/439 (1%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEV 178
+Y KCG + F++M KDLVCW++MI +P EA+ +K+M++E G+ AD +
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ + A LGD + +VHGY+ R+ L ++ V S++ M+ K G+ + A VF M
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++++W +++SG+ QNG A L L EM+ +P V+ + + ACA +GF LG+
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 299 SIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGI 355
H + V R + + L +++DMY+KCG A LF+ + R+ SWNV+I+ YG+
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HGHG+EAL LF +M E V+P+H TF S+LSA SH+GL++EGR F M + + +K
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEM-KRLSVTLEDK 299
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
H+AC+VD+L RAG ++EA ++ M + P VW ALL C H +G+ A +L+L
Sbjct: 300 HHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQL 359
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
P+ G + L+SN +A KW+EV +R+ M+ G+KK +S++E ++ F D+
Sbjct: 360 EPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQE 419
Query: 536 HNQYEDIVYVLKKLYLEMR 554
+ ++ ++ L +EM+
Sbjct: 420 NPYRHEVYKKMESLAIEMK 438
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 182/379 (48%), Gaps = 15/379 (3%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRPDSS 77
+Y V RK+F+E+ + + + ++I AY + E P E L L+ +M +E+ + DS
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
A L D+K + A ++ VG+S+L ++ KCG +A + F+ M
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
+D++ W+SM++G NGQ EA+ + M+ V + ++ ACA LG G
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQ 255
H + + + +D + +L+DMYAK G L+ A +F + + N +W LISG+
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL--V 313
+G LEL MQ G EP+ + S L AC+ G + G+ ++R L
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFA-EMKRLSVTLEDK 299
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGH---GEEALSLFLQM 369
V+DM + G+ A L +M S W ++ + IHG+ G+ A S LQ+
Sbjct: 300 HHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQL 359
Query: 370 IETMVKPDHSTFASLLSAL 388
+P+H+ + L+S +
Sbjct: 360 -----EPNHTGYYVLMSNI 373
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 120/244 (49%), Gaps = 6/244 (2%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS I+A++ + AR +F+ + R V ++NS++ Y++ E L L+++M
Sbjct: 97 GNS---ILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRD 153
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
D +P T + + AC L +G + V+ D + ++++++Y KCG + +
Sbjct: 154 SDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEK 213
Query: 130 AMVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A+ F + ++ W+ +I+G +G +EA++ + RM++EG++ + ++ AC
Sbjct: 214 AVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSAC 273
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTW 246
+ G G R + L+ K +VDM + G L A + K M S + W
Sbjct: 274 SHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVW 333
Query: 247 GALI 250
GAL+
Sbjct: 334 GALL 337
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 275/534 (51%), Gaps = 25/534 (4%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY D+ +A +F V +N I++A+ + + L+ QM +R
Sbjct: 283 GSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIR 342
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L+ C ++ +GE+I +V+ G+ +D++V ++++Y K G + +A
Sbjct: 343 PNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
E ++ KD+V W+SMI G V + ++A+ A+K M+K GI D + + I CA +
Sbjct: 403 LEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAM 462
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R GL +H + DV + +LV++YA+ G + A F+ + + +TW L+SGF
Sbjct: 463 RQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGF 522
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
AQ+GL L++ M M G + + + VSAL A A + +K GK IH ++ F
Sbjct: 523 AQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G ++I +Y KCG A+ F +M R+ +SWN II S HG G EAL F QM
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQM--- 639
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+EG +F M KY I+P HYAC++D+ RAG+++
Sbjct: 640 ---------------------KKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDR 678
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K V+ M VW LLS C HK +GE AK +L+L P D + L+SN +A+
Sbjct: 679 AKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAV 738
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
KW VRK MR G++K PG S +EV +HAF + D+ H E I L
Sbjct: 739 TGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 792
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 225/442 (50%), Gaps = 5/442 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR++FEEL R ++ +++ Y++ E L LY QM + V P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPT 142
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L +C G + + + G+ ++ FVG++++ LY++CG A F
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFY 202
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V ++++I+G A++ ++ M+ G+ D V + L+ ACA LGD +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQK 262
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y + ++ D ++ SL+D+Y K G ++ A +F +R N+V W ++ F Q
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQ 322
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ EL +MQ+ G P+ + L C G + LG+ IH +V+ F+ ++ +
Sbjct: 323 INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYV 382
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+IDMYSK G AR + + ++ +D++SW +IA Y H + ++AL+ F +M + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGI 442
Query: 375 KPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
PD+ AS +S + + +G + + VS Y + + +V+L AR G + EA
Sbjct: 443 WPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI--WNALVNLYARCGRIREA 500
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+ + + + W L+SG
Sbjct: 501 FSSFEEIEHKDEI-TWNGLVSG 521
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 223/453 (49%), Gaps = 6/453 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV-SLMDLKMGEE 97
RG + + + +E P +VL L+ ++ F AL+AC + ++ E
Sbjct: 4 RGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I KA+ G G D VG+ +++LY K G + A FE++ +D V W +M++G NG
Sbjct: 64 IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA+ Y++M + G+ V+ ++ +C G SVH ++ + V +
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNA 183
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+ +Y + G LA VF +M + VT+ LISG AQ LE+ EMQS G PD
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPD 243
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V++ S L ACA +G L+ G +H Y + + ++ S++D+Y KCG A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+++ WN+I+ ++G ++ LF QM ++P+ T+ +L + +G ++
Sbjct: 304 LGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDL 363
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G L V K + ++D+ ++ G +E+A ++++ M E + W ++++G
Sbjct: 364 GEQIHSLSV-KTGFESDMYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGY 421
Query: 457 HNHKKFSIGEKVAKKVLKLN--PDDLGIHALVS 487
H+ K++ K PD++G+ + +S
Sbjct: 422 VQHEYCKDALAAFKEMQKCGIWPDNIGLASAIS 454
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 296/581 (50%), Gaps = 41/581 (7%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
GNS+ +A G D+ +LF LP R +YN+++ +SR + G Y +++
Sbjct: 80 GNSLLSALARAGLVRDM---ERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLR 136
Query: 70 ED--VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
++ VRP T + + +L D +G ++ + + LG+G F GS ++++Y K G +
Sbjct: 137 DEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPI 196
Query: 128 NEA--------------------------MVA-----FEKMQRKDLVCWSSMINGLVFNG 156
+A MVA FE ++ +D + W++M+ GL NG
Sbjct: 197 GDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNG 256
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
EA+D ++RM+ EG+ D+ ++ AC L G +H Y R +V V +
Sbjct: 257 LESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGS 316
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
+LVDMY+K + LA VF+ M NI++W A+I G+ QNG + + EMQ G +P
Sbjct: 317 ALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKP 376
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALF 335
D +L S + +CA + L+ G H V + + +++ +Y KCG A LF
Sbjct: 377 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLF 436
Query: 336 DQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
D+M D +SW ++ Y G +E + LF +M+ VKPD TF +LSA S SGLV+
Sbjct: 437 DEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVD 496
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+GR +F M + I P + HY CM+DL +R+G +++A + + M P W LLS
Sbjct: 497 KGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556
Query: 456 CHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVP 515
C IG+ A+ +LKL+P + + L+ + A + +W +VA +R+ MR +KK P
Sbjct: 557 CRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEP 616
Query: 516 GYSVVEVNGELHAFIMEDKSH----NQYEDIVYVLKKLYLE 552
G S ++ ++H F +D+SH YE + ++ K+ E
Sbjct: 617 GCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEE 657
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 185/390 (47%), Gaps = 36/390 (9%)
Query: 100 RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPR 159
R+ + G ++ G+S+L+ + G + + F + ++D V +++++ G G
Sbjct: 66 RRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHA 125
Query: 160 EAVDAYKRMKKE--GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
A AY + ++ G+ + M G++ + LGD G VH +R +
Sbjct: 126 RAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSP 185
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIV-------------------------------TW 246
LVDMYAK G + A VF M N+V TW
Sbjct: 186 LVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITW 245
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
+++G QNGL L++ M++ G D + S L AC + L+ GK IH Y R
Sbjct: 246 TTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITR 305
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
++ N+ +G++++DMYSKC A A+F +M +++ISW +I YG +G GEEA+ +
Sbjct: 306 TCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRV 365
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M +KPD T S++S+ ++ +EEG F + ++P +V L
Sbjct: 366 FSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYG 424
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G +E+A ++ D MS ++ W AL+ G
Sbjct: 425 KCGSIEDAHRLFDEMSFHDQVS-WTALVMG 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
+ L Y ++ LYG I A +LF+E+ ++ ++++ Y++ E + L
Sbjct: 407 SGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDL 466
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNL 120
+ +M+ + V+PD TF L AC + G + ++ ++ +D + + M++L
Sbjct: 467 FEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY--TCMIDL 524
Query: 121 YVKCGKMNEAMVAFEKMQR-KDLVCWSSMINGLVFNG 156
Y + G + +A ++M R D W+++++ G
Sbjct: 525 YSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 295/539 (54%), Gaps = 10/539 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ + + AR LF+E+P R V + +++ Y+ E L ++ +M+ P+
Sbjct: 9 LISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPN 68
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK-MNEAMVAF 134
T + L AC M + AV G +V +++++ Y + + +A F
Sbjct: 69 EYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLF 128
Query: 135 EKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ + + W+SMI G GQ R + +K M K+G++ + AC + D
Sbjct: 129 DALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDL 188
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H I++ L++++ V SL+DMY + A +F N++TW +I+G+
Sbjct: 189 CLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGY 248
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
+Q + L+LL+EM EP+ +L S ACA + L+ GK +HG +RR + +L
Sbjct: 249 SQCDPLMA-LQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDL 304
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G +++DMYSKCG + A+ +FD+M +D SW +IA YG++G+G EA+ LF MI
Sbjct: 305 QMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHA 364
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PDH F SL+S+ SH+GLV+EG +F M+++Y +QP ++ Y +V+LLARAG + E
Sbjct: 365 GVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLRE 424
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL ++D+M P VW ALL H +G A+K+ ++NPDD+ + ++++ +A
Sbjct: 425 ALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAA 484
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY---EDIVYVLKK 548
KW E A R+++R G +K G S +EV ++++F D S Q ++++++L +
Sbjct: 485 GSKWGEYAFTRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSSSPQVCLADEVLHILSQ 543
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L V +I +Y I+ AR LF+ P R + T+N++I YS+ + P L
Sbjct: 199 IKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCD-PLMAL 257
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L +M E P+ T T AC L L+ G+++ + Y +D+ +G++++++Y
Sbjct: 258 QLLLEMNDE---PNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMY 314
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + A F++M KD W+SMI G NG EAV + M G+ D VV +
Sbjct: 315 SKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFL 374
Query: 182 GLIQACADLGDSRFGLSVHGYSIRR------HLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
LI +C S GL G++ R +L + +V S+V++ A+ G L A +
Sbjct: 375 SLISSC-----SHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLI 429
Query: 236 KNMS-RINIVTWGALI 250
M + WGAL+
Sbjct: 430 DTMPFAPDEYVWGALL 445
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
K T+L+ G + A +F M ++V W A++SG+A NGL L++ M +
Sbjct: 4 KHATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAA 63
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC--GVPS 329
G P+ +L S L AC + +H VRR D + ++ID Y+ GV
Sbjct: 64 GAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVD 123
Query: 330 CARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
AR LFD + S R SW +IA Y G L LF M++ V + STFA
Sbjct: 124 -ARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGV--ELSTFA 174
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T++I G ARALFD+M RD+++W +++ Y +G EAL +F +M+
Sbjct: 6 ATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 375 KPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
P+ T +S+L+A H+ V G D M Y + YA +
Sbjct: 66 APNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRG---VDRM--PYVVNALIDSYASL--- 117
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
A V +A ++ D++ + A W ++++G + G ++ K +LK
Sbjct: 118 ---AEGVVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLK 165
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 286/527 (54%), Gaps = 2/527 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+ + + T+NS++ YS + E + L+ ++ ++P TF L A V
Sbjct: 194 ASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D K G+++ ++ + +VFVG+++L+ Y K +++E F +M D + ++ +
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVV 313
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I +NGQ +E+ D +++++ D + L+ + R G +H +I
Sbjct: 314 ITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGA 373
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
N + +V+ +LVDMYAK A +F N++ + V W A+IS + Q G + + +
Sbjct: 374 NFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV 327
M+ G D + S L ACA + + LG+ +H +R F N+ G++++D Y+KCG
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGC 493
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+ A F +M R+ +SWN +I++Y +G+ + L+ F QMI++ KPD +F S+LSA
Sbjct: 494 MTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
SH G VEE + F+ M Y++ P +HY MVD+L R G +EA K++ M EP
Sbjct: 554 CSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEI 613
Query: 448 VWVALLSGCHNHKKFSIGEKVAKKVLKL-NPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ++L+ C HK + +K A ++ + + D + +SN +A+ +W+ VA V+K M
Sbjct: 614 MWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAM 673
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
R G++KVP YS VE+ + H F DKSH + + I+ + L EM
Sbjct: 674 RDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEM 720
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 202/428 (47%), Gaps = 3/428 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+ + R ++ +I Y + E LY M + + PD T L
Sbjct: 93 ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE 152
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L + +I ++LGY ++ V +S+++ Y K + A F+ M KD V ++S+
Sbjct: 153 LETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSL 212
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ G G EA++ + + GI + L+ A L D++FG VHG+ ++ +
Sbjct: 213 MTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF 272
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+V V +L+D Y+K +D +F M ++ +++ +I+ +A NG + +L +
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
+Q F+ + L L++G+ IH + +F + +++DMY+KC
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A+ +FD + + + W +I++Y G EE +++F M T V D +TFAS+L A
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
++ + GR L++ + + ++D A+ G + +A+K M ++
Sbjct: 453 CANLASISLGRQLHSLLI-RSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 448 VWVALLSG 455
W AL+S
Sbjct: 512 -WNALISA 518
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 21/374 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVS-ARKLFEELP-LRGVDTYNSIIIAYSRKESPF 58
++KTN + VG + Y K+D V KLF E+P L G+ +YN +I +Y+
Sbjct: 267 VLKTNF-VWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGI-SYNVVITSYAWNGQFK 324
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
E L+ ++ + R D F A L S ++L+MG +I +A+ +G + V ++
Sbjct: 325 ESFDLFRKL--QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENA 382
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++++Y KC EA F+ + K V W++MI+ V G+ E ++ + M++ G+ AD
Sbjct: 383 LVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPAD 442
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ +++ACA+L G +H IR +V ++L+D YAK G + A F
Sbjct: 443 QATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFG 502
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M N V+W ALIS +AQNG TL +M G++PDSVS +S L AC+ GF++
Sbjct: 503 EMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEE 562
Query: 297 G-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNV 348
I+ T +R + TS++D+ + G A L +M I W+
Sbjct: 563 ALWHFNSMTQIYEVTPKREHY-----TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 349 IIASYGIHGHGEEA 362
++ S IH + E A
Sbjct: 618 VLNSCRIHKNHELA 631
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 179/340 (52%), Gaps = 3/340 (0%)
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
M++ ++K GK+++A F+ M + V W+ +I G + + Q +EA Y M++ GI+ D
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
V ++ L+ +L + +H + I+ ++ V SLVD Y KT L LAS +FK
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+M + VT+ +L++G++ GL +EL +E+ + G +P + + L A + K
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ +HG+ ++ F +N+ +G +++D YSK LF +M D IS+NV+I SY
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G +E+ LF ++ T FA+LLS + S + GR ++ +
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
A +VD+ A+ +EA KI D+++ + + W A++S
Sbjct: 380 ENA-LVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISA 417
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 41/223 (18%)
Query: 292 GFLKLGKSIHGYTVRRFDFNLVLGTSVIDM----YSKCGVPSCARALFDQMQSRDLISWN 347
FL+ G +H + V FD T ++M + K G S AR LFD M R +SW
Sbjct: 52 NFLERGDLVHAHQV--FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS-----------HSGLVEE 396
++I Y +EA L+ M ++PD+ T +LLS H+ +++
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 397 GRYWFDLMVS--------------------KYKIQPTEKHYACMVDLLARAGEVEEALKI 436
G Y ++LMV K+ + + ++ + G EEA+++
Sbjct: 170 G-YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 437 ---VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+ + +P + ALLS G++V VLK N
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 272/490 (55%), Gaps = 10/490 (2%)
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-----GNDVFVGSSMLNLYVKCGKM 127
R D + T +K CV G I R G +FV +S+ ++Y K G +
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLV-FNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++A+ F+ M +++V W++++ L +G+ +EA+ M+++G+ + ++ A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C G +VH +++ L+ DV V++SL+D Y K G LD VF M ++V W
Sbjct: 181 CTTPG---MLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++I+GFAQ+G +EL M M+ GF + +L S L AC + L+ G+ +H + V
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAH-VL 296
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
++D +L+L +++DMY KCG A ALF +M RD+ISW+ +++ +G EAL +F
Sbjct: 297 KYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVF 356
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
M V P+H T +L A SH+GLVE+G ++F M + IQP +H+ CMVDLL R
Sbjct: 357 DLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGR 416
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
AG+++EA++ + MS EP +W LL C HK S+ A+++LKL PDD G L+
Sbjct: 417 AGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLL 476
Query: 487 SNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
SN +A ++W + K MR GM+K PG S +E+ +H FI D SH + I+ L
Sbjct: 477 SNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQEL 536
Query: 547 KKLYLEMRAI 556
+L ++++
Sbjct: 537 NRLIGRIKSL 546
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 204/423 (48%), Gaps = 48/423 (11%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS----RKESPFEVLGLYNQ 66
NS+ + A +G +D A ++F+ +P+R V T+ +++ A + RK+ E L
Sbjct: 108 NSLASMYAKFGLLDD---ALRMFDGMPVRNVVTWTTVVAALASADGRKQ---EALRFLVA 161
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M ++ V P++ TF+ L AC + M + V+ G +DVFV SS+++ YVK G
Sbjct: 162 MRRDGVAPNAYTFSSVLGACTT---PGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGD 218
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
++ F++M +DLV W+S+I G +G A++ + RMK G +++ + +++A
Sbjct: 219 LDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRA 278
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C + G VH + ++ + D+ + +L+DMY K G L+ A +F M + ++++W
Sbjct: 279 CTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISW 336
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KS 299
++SG AQNG + L + M+S G P+ V++V L AC+ G ++ G K
Sbjct: 337 STMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKR 396
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGH 358
+ G R N ++D+ + G A M D + W ++ + +H +
Sbjct: 397 LFGIQPEREHHN-----CMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKN 451
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLS-----------------ALSHSGLVEE-GRYW 400
A ++++ ++PD LLS A+ G+ +E GR W
Sbjct: 452 ASLAAYAAREILK--LEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSW 509
Query: 401 FDL 403
+L
Sbjct: 510 IEL 512
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 304/579 (52%), Gaps = 38/579 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE-VLGLYNQMIKEDVRP 74
+I+ Y G D SA +F R +NS + + VL ++ ++ + V
Sbjct: 462 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS ++VALK C +MD+ +G EI ++ G+ DV++ +++N Y +C + +A F
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 581
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC-ADLGDS 193
+M + + W+ I + + + ++ V+ +++M+ + A+ ++ ++QA ++LG
Sbjct: 582 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFL 641
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G HGY +R + DV V TSL+DMY K L A VF NM NI W +L+SG+
Sbjct: 642 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGY 701
Query: 254 AQNGLAGSTLELLMEMQSCGFEPD-----------------------------------S 278
+ G+ L LL +M+ G +PD S
Sbjct: 702 SFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNS 761
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
S+ L ACA + L+ GK IH ++R F ++ + T++IDMYSK A +F +
Sbjct: 762 ASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRR 821
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+Q++ L SWN +I + I G G+EA+S+F +M + V PD TF +LLSA +SGL+ EG
Sbjct: 822 IQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 881
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+FD M++ Y+I P +HY CMVDLL RAG ++EA ++ +M +P +W ALL C
Sbjct: 882 WKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCR 941
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
HK E AK + KL P++ + L+ N +++ +WE++ +R+ M +G++ +
Sbjct: 942 IHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVW 1001
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
S +++N +H F ++K H I + L +L EM+ +
Sbjct: 1002 SWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1040
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 304/531 (57%), Gaps = 6/531 (1%)
Query: 29 ARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKAC 86
A KLF E+ +R V +++ +I + + + ++ M+ E + PD T LKAC
Sbjct: 201 AYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKAC 260
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
+L D+ +G + + G +D+FVG+S++++Y KC ++ A AF+++ K+++ W+
Sbjct: 261 TNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWN 320
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
M++ + N EA+ M +EG + DEV + ++Q DS SVHG IR+
Sbjct: 321 LMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRK 380
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ + S++D YAK ++LA VF M++ ++V W +I+GFA+NG + +
Sbjct: 381 GYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVF 440
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+M P++VS+++ + ACA L+ K HG VRR + +GTS+IDMYSKC
Sbjct: 441 KQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKC 499
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + F+Q+ ++++ W+ +I+++ I+G EAL LF ++ + KP+ T SLL
Sbjct: 500 GDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLL 559
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST--E 443
SA SH GL+EEG +F MV K+ I+P +HY+C+VD+L+RAG+ EAL++++ + E
Sbjct: 560 SACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEME 619
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
G ++W LLS C ++ S+G A +VL+L P + L SN +A + A +R
Sbjct: 620 AGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMR 679
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ ++ G+K V GYS+V +N + F+ D + + ++I ++KKL+ M+
Sbjct: 680 RLAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIYLMVKKLHGVMK 730
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 222/460 (48%), Gaps = 19/460 (4%)
Query: 59 EVLGLYNQM-IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E L LY+++ I D+ LKAC S +G + ++ G + + +S
Sbjct: 30 EALQLYHEIRISGAQLSDTWVLPSILKAC-SNTSFNLGTAMHGCLIKQGCQSSTSIANST 88
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
++ Y+K G ++ A AF+ + KD V W+ M++G NG + + + + +
Sbjct: 89 IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNI 148
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ +IQA +L G + HGY R + + VQ SL+ +YA+ H+ A +F
Sbjct: 149 SSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGE 207
Query: 238 MS-RINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLK 295
MS R ++V+W +I GF Q G + M + G PD V++VS L AC + +
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267
Query: 296 LGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
LG +HG + R + +L +G S+IDMYSKC A F ++ +++ISWN+++++Y
Sbjct: 268 LGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYI 327
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
++ EAL+L M+ + D T A++L H + R +++ K + E
Sbjct: 328 LNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRK-GYESNE 386
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK----FSIGEKVAK 470
++D A+ VE A + D M+ + +A W +++G + K S+ +++ +
Sbjct: 387 LLLNSVIDAYAKCNLVELARMVFDGMNKKDVVA-WSTMIAGFARNGKPDEAISVFKQMNE 445
Query: 471 KVLKLNPDDLGIHALVSNFFA----MEQKWEEVAGVRKTM 506
+V+ P+++ I L+ + KW VR+ +
Sbjct: 446 EVI---PNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL 482
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
++ DL+ S I ++G +EA+ Y ++ G +D V+ +++AC++
Sbjct: 10 LRLSDLI---SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNL 65
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G ++HG I++ + S +D Y K G LD A F + + V+W ++ G
Sbjct: 66 GTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFS 125
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG + L ++ + F+P+ SL+ + A ++ G + HGY R F L +
Sbjct: 126 NGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSV 185
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMI-ET 372
S++ +Y++ + A LF +M R D++SW+V+I + G E+ +F M+ E
Sbjct: 186 QNSLLSLYAEVHM-YFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEA 244
Query: 373 MVKPDHSTFASLLSALSH 390
+ PD T S+L A ++
Sbjct: 245 GIPPDGVTVVSVLKACTN 262
>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 723
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 318/546 (58%), Gaps = 12/546 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
I+ LY + D +SARKLF+E+ R V +++ +I +Y + + P L L+ +M++E P
Sbjct: 174 ILCLYS-EFDSLSARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEP 232
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVA 133
D T T LKAC L D+ +G + ++ G+ DVFV +S++++Y K + A
Sbjct: 233 DCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRV 292
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++ +++V W+S++ G V+N + EA++ ++ MKKE ++ADEV ++ L+Q C
Sbjct: 293 FDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHP 352
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
S+HG IRR + +SL+D Y +D A VF +MS ++V+ +ISG
Sbjct: 353 LPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGL 412
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN- 311
+ G + + + +M+ +P++++++S L AC+ L+ K HG +RR N
Sbjct: 413 GRCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAIND 469
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ + TS++D Y+KCG AR FDQ+ + ++SW VII++Y I+G ++AL+ F +M
Sbjct: 470 ISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEMKR 529
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
P+ T+ + LSA +H GLV++G F MV + + +P+ +HY+C+VD+L+RAGE++
Sbjct: 530 DSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQ-KPSLQHYSCIVDMLSRAGEID 588
Query: 432 EALKIVDSM--STEPGLAVWVALLSGCHNHKKFS-IGEKVAKKVLKLNPDDLGIHALVSN 488
A++++ ++ + G + W A+LSGC N K I +V +VL+L P + L S+
Sbjct: 589 TAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEVVAEVLELEPLCSSGYLLASS 648
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
FA E+ W +VA +R+ +++ ++ V GYS+V F+ DK ++ ++ V+++
Sbjct: 649 VFAAEKSWVDVAMMRRLVKERNVRVVAGYSMVLEGSIARKFLAGDKLNHSDSELNDVVQR 708
Query: 549 LYLEMR 554
L+ MR
Sbjct: 709 LHRCMR 714
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 58/437 (13%)
Query: 59 EVLGLYNQMIKEDVR-PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
EV+ Y+++ ++ D F + KAC L L G E + V VG+S+
Sbjct: 27 EVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQGFESY-----------VSVGNSI 75
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ Y+KCG + + AF+ M +D V W+ ++ GL+ +G E + + +++ G + +
Sbjct: 76 ADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNV 135
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ +I AC L G +HGY IR VQ S++ +Y++ L A +F
Sbjct: 136 STLVLVIHACRSLWFD--GEKIHGYVIRSGFWRISSVQNSILCLYSEFDSLS-ARKLFDE 192
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKL 296
MS ++++W +I + Q+ LEL EM + EPD V++ S L ACA + + +
Sbjct: 193 MSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDV 252
Query: 297 GKSIHGYTVRR-FDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+S+HG+++RR FD ++ + S+IDMYSK A +FD+ R+++SWN I+A +
Sbjct: 253 GRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFV 312
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLS---------------------------- 386
+ +EAL +F M + ++ D T SLL
Sbjct: 313 YNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEV 372
Query: 387 -------ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
A + LV++ R FD M K + + M+ L R G +EA+ I
Sbjct: 373 ALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCST-----MISGLGRCGRSDEAISIFCQ 427
Query: 440 MSTEPGLAVWVALLSGC 456
M +P ++LLS C
Sbjct: 428 MRDKPNAITVISLLSAC 444
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 22/246 (8%)
Query: 248 ALISGFAQNGLAGSTLELLM---EMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGY 303
AL S Q + G E++ E+QS G + D ACA++ +L G
Sbjct: 11 ALSSKIKQASVNGKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQG------ 64
Query: 304 TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
F+ + +G S+ D Y KCG FD M SRD +SWNVI+ HG EE L
Sbjct: 65 ----FESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGL 120
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
F ++ +P+ ST ++ A E + + + ++I + C+
Sbjct: 121 WWFSKLRVWGFEPNVSTLVLVIHACRSLWFDGEKIHGYVIRSGFWRISSVQNSILCLYSE 180
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL---KLNPDDL 480
+ A K+ D MS E + W ++ ++ +G ++ K+++ K PD +
Sbjct: 181 F----DSLSARKLFDEMS-ERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCV 235
Query: 481 GIHALV 486
+ +++
Sbjct: 236 TVTSVL 241
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 293/542 (54%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A+++F+ + R ++ +++ Y+ + E L+ M+++
Sbjct: 164 LLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEK 223
Query: 76 SSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T A+ + VS+ + L MG ++ ++ G V V +S++ +Y K M+ AM F
Sbjct: 224 NEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVF 283
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ ++ + WS+MI G NG+ A + +M G E +G++ AC+D+G
Sbjct: 284 GSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALV 343
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN-IVTWGALISGF 253
G H ++ V V+++LVDMYAK G + A F + ++ +V W A+I+G
Sbjct: 344 VGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGH 403
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNL 312
QNG L L M G P +++ S L ACA + L LGK +H ++ RF
Sbjct: 404 VQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGG 463
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+GT++ MYSKCG + +F +M RD+ISWN II+ + HG G +AL +F +M
Sbjct: 464 SVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLE 523
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PDH TF +LLSA SH GLV+ G ++F M Y + PT HYACMVD+L+RAG+++E
Sbjct: 524 GTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKE 583
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A +DS++ + G +W +L C + + F +G +++++L +D + L+SN +A
Sbjct: 584 AKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAA 643
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++KW +V VR MR G+ K G S VE+ +H F++ ++ H + E+I L +L
Sbjct: 644 QRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAENINVELIRLAKH 703
Query: 553 MR 554
M+
Sbjct: 704 MK 705
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 195/381 (51%), Gaps = 11/381 (2%)
Query: 28 SARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK--EDVRPDSSTFTVAL 83
+A +F ++P LR V ++NS++ SR P L + M+ E V P +F A
Sbjct: 69 AAYVVFADIPAALRDVASWNSLLNPLSRHH-PVSALSHFRSMMSSPEAVLPSPHSFAAAF 127
Query: 84 KACVSLMDLKMGEEIWRKAVELGYG---NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
A + G A +L N+VFV +++LN+Y K G +++A F+ M +
Sbjct: 128 TAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHR 187
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+ V W++M++G EA + ++ M +K ++ +E V ++ A + G +
Sbjct: 188 NAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQL 247
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG ++ L V V+ SLV MYAK +D A VF + N +TW A+I+G+AQNG A
Sbjct: 248 HGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEA 307
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
+ ++M S GF P + V L AC+ +G L +GK H V+ F+ + + +++
Sbjct: 308 NCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSAL 367
Query: 319 IDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+DMY+KCG A+ F Q+ D++ W +I + +G EEAL L+ +M + + P
Sbjct: 368 VDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPS 427
Query: 378 HSTFASLLSALSHSGLVEEGR 398
+ T S+L A + ++ G+
Sbjct: 428 YLTVTSVLRACACLAALDLGK 448
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 179/358 (50%), Gaps = 8/358 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + + ++ +Y + +A ++F R T++++I Y++
Sbjct: 251 VLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCA 310
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ QM P TF L AC + L +G++ V+LG+ V+V S+++++
Sbjct: 311 ARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDM 370
Query: 121 YVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG + +A F ++ D+V W++MI G V NG+ EA+ Y RM K+GI +
Sbjct: 371 YAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLT 430
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ +++ACA L G +H ++ +L V T+L MY+K G+L+ + VF+ M
Sbjct: 431 VTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMP 490
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++++W ++IS F+Q+G L++ EM+ G PD ++ ++ L AC+ +G + G
Sbjct: 491 DRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWF 550
Query: 300 IHGYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIAS 352
+ D+NL+ ++D+ S+ G A+ D + W +++ +
Sbjct: 551 Y--FRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGA 606
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 26/287 (9%)
Query: 187 CADLGD--SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH--LDLASHVFKNMSRI- 241
CA D R G ++HG++++ V SL+ Y L A VF ++
Sbjct: 22 CAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAAL 81
Query: 242 -NIVTWGALISGFAQNGLAGSTLELLMEMQSC--GFEPDSVSLVSALLACAQIGFLKLGK 298
++ +W +L++ +++ S L M S P S +A A A++ G
Sbjct: 82 RDVASWNSLLNPLSRHHPV-SALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGA 140
Query: 299 SIHGYTVRRFDF----NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
H + N+ + T++++MY K G S A+ +FD M R+ +SW +++ Y
Sbjct: 141 VTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYA 200
Query: 355 IHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHS-----GLVEEGRYWFDLMVSKY 408
EEA LF M++ ++ + ++LSA+S G G D +V
Sbjct: 201 TGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFV 260
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + +V + A+A ++ A+++ S S E W A+++G
Sbjct: 261 SVENS------LVTMYAKAECMDAAMRVFGS-SKERNSITWSAMITG 300
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 292/538 (54%), Gaps = 1/538 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + AR +F+ + + T+ +++ YS + P + L +++M +P+
Sbjct: 191 LIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPN 250
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T LKA V L +G+ I AV+ + VG ++L++Y KCG + +A FE
Sbjct: 251 PFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFE 310
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ D++ WS +I+ + Q +A + + RM + + +E + G++QACA++
Sbjct: 311 IIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDL 370
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ ++ V +L+D+YAK +++ + +F+++ N V+W +I G+ Q
Sbjct: 371 GQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQ 430
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+G A L + EM++ V+ S L ACA +K IH + F+ + ++
Sbjct: 431 SGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIV 490
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
S+ID Y+KCG A +F+ + D++SWN II+ Y +HG +AL LF +M ++
Sbjct: 491 CNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDT 550
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ TF +LLS +GLV +G F+ M ++I+P+ HY C+V LL RAG + +AL
Sbjct: 551 KPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDAL 610
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K + + + P VW ALLS C HK ++G+ A+KVL++ P D + L+SN +A
Sbjct: 611 KFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAG 670
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++VA +RK+MR G+KK G S VE+ GE+HAF + H I +L+ L L+
Sbjct: 671 ILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLK 728
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 249/485 (51%), Gaps = 25/485 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + +AR+LF+ +P R + ++ +++ Y+ + E GL+ ++ +E +
Sbjct: 90 LLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVN 149
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T LK V++ + I A +LG+ + FVGSS+++ Y CG ++ A F+
Sbjct: 150 HFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFD 209
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD V W++M++ N P +A++ + +M+ G + V+ +++A L +
Sbjct: 210 GIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVL 269
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG +++ + + V +L+DMYAK G+++ A VF+ + +++ W LIS +AQ
Sbjct: 270 GKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ 329
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ E+ + M P+ SL L ACA + FL LG+ IH ++ ++ L +
Sbjct: 330 SYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFV 389
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +++D+Y+KC + +F ++ + +SWN II Y G E+ALS+F +M V
Sbjct: 390 GNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHV 449
Query: 375 KPDHSTFASLLSALSHSG----------LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
TF+S+L A +++ L+E+ + D +V ++D
Sbjct: 450 LSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNS-----------LIDTY 498
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGI 482
A+ G + +ALK+ +S+ + + W A++SG H + + ++ ++ K + P+D+
Sbjct: 499 AKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTF 557
Query: 483 HALVS 487
AL+S
Sbjct: 558 VALLS 562
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 198/387 (51%), Gaps = 6/387 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y I AR +FE +P V ++ +I Y++ + ++ +M++ V
Sbjct: 290 GALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVV 349
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ + + L+AC ++ L +G++I ++LGY +++FVG++++++Y KC M ++
Sbjct: 350 PNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEI 409
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F ++ + V W+++I G +G +A+ ++ M+ + + +V +++ACA+
Sbjct: 410 FRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASI 469
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ + +H + N D V SL+D YAK G + A VF+++ + ++V+W A+ISG+
Sbjct: 470 KHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGY 529
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV--RRFDFN 311
A +G A LEL M +P+ V+ V+ L C G + G S+ R +
Sbjct: 530 ALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPS 589
Query: 312 LVLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ T ++ + + G + + + D + + W +++S +H + AL F
Sbjct: 590 MDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKN--VALGKFSAEK 647
Query: 371 ETMVKP-DHSTFASLLSALSHSGLVEE 396
++P D +T+ L + + +G++++
Sbjct: 648 VLEIEPQDETTYVLLSNMYAAAGILDQ 674
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 184/369 (49%), Gaps = 4/369 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELG--YGNDVFVGSSMLNLYVKCGKMNEAMV 132
DS L+ C++ D + G + + V+ G D F + +LNLY K G + A
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M +++V + +++ G G EA ++R+++EG + + V+ +++ +
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+H + + + + V +SL+D Y+ G + A VF + + VTW A++S
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFN 311
+++N + L +M+ G +P+ L S L A + LGK IHG V+ D
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTE 285
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+G +++DMY+KCG AR +F+ + D+I W+ +I+ Y E+A +FL+M+
Sbjct: 286 PHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMR 345
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V P+ + + +L A ++ ++ G+ +L++ K + ++D+ A+ +E
Sbjct: 346 SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVI-KLGYESELFVGNALMDVYAKCRNME 404
Query: 432 EALKIVDSM 440
+L+I S+
Sbjct: 405 NSLEIFRSL 413
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 268/483 (55%), Gaps = 5/483 (1%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P S + + L+A L K+ ++ + GYG F+ + +LNL G ++
Sbjct: 10 PHSPAYNLLLQAGPRL---KLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66
Query: 134 FEKMQRKDLVCWSSMINGLV-FNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F + D ++S+I F+ ++ Y RM + +I++CADL
Sbjct: 67 FLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVA 126
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R G +HG+ + DV VQT+L+ Y K G L A VF M ++VTW ++ISG
Sbjct: 127 LRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISG 186
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ QNG A + L M+ G EP+S + VS L ACA +G LG +H Y V D N
Sbjct: 187 YEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLN 246
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+VLGTS+I+MY++CG S AR +FD M+ R++++W +I+ YG +G+G +A+ LF +M
Sbjct: 247 VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRR 306
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ P+ TF ++LSA +H+GLV EGR F+ M +Y++ P +H+ C+VD+L RAG ++
Sbjct: 307 NGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLD 366
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + + EP A+W A+L C HK F +G +VA+ L P + + ++SN +A
Sbjct: 367 EAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYA 426
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+ + ++V VR M + +KK GYS ++++ + + F M DKSH + +I + L +L
Sbjct: 427 LAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMR 486
Query: 552 EMR 554
+ R
Sbjct: 487 KCR 489
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 183/331 (55%), Gaps = 12/331 (3%)
Query: 6 LSAYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+S YG S + +++ L I R++F +P + S+I + S+ + F V
Sbjct: 37 VSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHN-FSVYS 95
Query: 63 LY--NQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
LY +M+ +V P + TFT +K+C L+ L+ G I + G+G+DV+V +++++
Sbjct: 96 LYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSF 155
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG + A F+KM+ + +V W+SMI+G NG +EA+ + RMK+ G++ +
Sbjct: 156 YGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATF 215
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ ++ ACA LG G VH Y++ L+L+V + TSL++MY + G++ A VF +M
Sbjct: 216 VSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKE 275
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+V W A+ISG+ NG +EL EM+ G P+S++ V+ L ACA G + G+ +
Sbjct: 276 RNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRV 335
Query: 301 HGYTVRRFDFNLVL----GTSVIDMYSKCGV 327
+ R ++ LV ++DM + G+
Sbjct: 336 --FESMREEYRLVPEVEHHVCLVDMLGRAGL 364
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 274/516 (53%), Gaps = 32/516 (6%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++ D S F+ L++C+ L L G+++ + G D F+ + +LN Y K G+ +
Sbjct: 57 EIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSS 116
Query: 131 MVAFEKMQRKD-------------------------------LVCWSSMINGLVFNGQPR 159
+V F M R++ + W++MI GL +
Sbjct: 117 LVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNK 176
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+A+ +K M G DE + +++ CA L G VH ++ L V +SL
Sbjct: 177 QALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLA 236
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
MY K+G L + K+M +V W LI+G AQNG L M+ GF PD +
Sbjct: 237 HMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKI 296
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LVLGTSVIDMYSKCGVPSCARALFDQM 338
+ VS L AC+++ L G+ IH ++ + L + +S+I MYS+ G + F
Sbjct: 297 TFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR 356
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
++ D++ W+ +IA+YG HG GEEAL LF QM + ++ + TF SLL A SHSGL E+G
Sbjct: 357 ENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGT 416
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
+FDLMV KYK++P +HY C+VDLL RAG +EEA ++ SM +P +W LL+ C
Sbjct: 417 EYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKL 476
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
HK+ + E+++++++KL+P D + L+SN A + W V+ +RK MR ++K PG S
Sbjct: 477 HKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGIS 536
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+E+ +H F M DKSH QY +I LK+L E++
Sbjct: 537 WLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELK 572
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 217/457 (47%), Gaps = 43/457 (9%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
D+ SA+KLF+E+ R + T+N++I ++ E + L L+ +M PD T L+
Sbjct: 143 DLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLR 202
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
C L L G+E+ ++ G+ VGSS+ ++Y+K G +++ + M + +V
Sbjct: 203 GCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVA 262
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+++I G NG P E ++ Y MK G D++ + ++ AC++L G +H I
Sbjct: 263 WNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVI 322
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLE 264
+ + + V +SL+ MY+++G L+ + F + ++V W ++I+ + +G LE
Sbjct: 323 KAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALE 382
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMY 322
L +M+ E + V+ +S L AC+ G + G V+++ + T V+D+
Sbjct: 383 LFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLL 442
Query: 323 SKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
+ G A + M + D I W ++A+ +H E A ++ E ++K D
Sbjct: 443 GRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA----ERISEEIIKLDPLDA 498
Query: 382 AS--LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
AS LLS + S R W ++ ++ +A++ S
Sbjct: 499 ASYVLLSNIHAS-----ARNWLNV------------------------SQIRKAMR-DRS 528
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+ EPG++ W+ L + H +FS+G+K + +++
Sbjct: 529 VRKEPGIS-WLELKNLVH---QFSMGDKSHPQYFEID 561
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 13/252 (5%)
Query: 7 SAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ 66
S G+S+ + G +D KL + +P+R V +N++I ++ P EVL YN
Sbjct: 229 SVVGSSLAHMYIKSGSLSD---GEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNM 285
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M RPD TF L AC L L G++I + ++ G + + V SS++++Y + G
Sbjct: 286 MKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGC 345
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ +++ AF + D+V WSSMI F+G+ EA++ + +M+ ++A+EV + L+ A
Sbjct: 346 LEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYA 405
Query: 187 CA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-R 240
C+ + G F L V Y ++ ++ T +VD+ + G L+ A + ++M +
Sbjct: 406 CSHSGLKEKGTEYFDLMVKKYKLKPR----IEHYTCVVDLLGRAGRLEEAEGMIRSMPVQ 461
Query: 241 INIVTWGALISG 252
+ + W L++
Sbjct: 462 PDGIIWKTLLAA 473
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 37/319 (11%)
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
L +G+ ++A D + I +D + L+Q+C LG G VH I
Sbjct: 38 FTSLCNDGRIKQAYDTFT----SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGG 93
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR---------------------------- 240
+ D + L++ Y+K G + +F NM R
Sbjct: 94 SKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDE 153
Query: 241 ---INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
NI TW A+I+G Q L L EM GF PD +L S L CA + L G
Sbjct: 154 MSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAG 213
Query: 298 KSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +H ++ F+ + V+G+S+ MY K G S L M R +++WN +IA +
Sbjct: 214 QEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G EE L+ + M +PD TF S+LSA S + +G+ V K
Sbjct: 274 GCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQ-IHAEVIKAGASSVLAV 332
Query: 417 YACMVDLLARAGEVEEALK 435
+ ++ + +R+G +E+++K
Sbjct: 333 VSSLISMYSRSGCLEDSIK 351
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 271/485 (55%), Gaps = 2/485 (0%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++ P + + AC +L+ ++ + D F+ +S+++LY KCG + EA
Sbjct: 46 ELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEA 105
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M+RKD+V W+S+I G N P EA+ M K + L++A
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
DS G +H +++ + DV V ++L+DMYA+ G +D+A+ VF + N V+W ALI
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
SGFA+ G + L EM GFE + S + A++G L+ GK +H + ++ R
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQK 285
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
G +++DMY+K G AR +FD++ +DL++WN ++ ++ +G G+EA+S F +M
Sbjct: 286 MTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEM 345
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ + + TF +L+A SH GLV+EG+ +F++M +Y ++P H+ +V LL RAG
Sbjct: 346 RKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAGL 404
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ AL + M EP AVW ALL+ C HK +G+ A V +L+PDD G L+ N
Sbjct: 405 LNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNI 464
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A +W+ A VR+ M+ +G+KK P S VE+ +H F+ D +H + E+I + ++
Sbjct: 465 YASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQI 524
Query: 550 YLEMR 554
++R
Sbjct: 525 SKKIR 529
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 150/283 (53%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ ARK+F+E+ + + ++ S+I Y++ + P E +GL M+K +P+
Sbjct: 92 LIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPN 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKA + D +G +I AV+ + DV+VGS++L++Y +CG M+ A F+
Sbjct: 152 GFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFD 211
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ K+ V W+++I+G G A+ + M + G +A + + A LG
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQ 271
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ + +L+DMYAK+G + A VF + ++VTW +++ FAQ
Sbjct: 272 GKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQ 331
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
GL + EM+ G + V+ + L AC+ G +K GK
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGK 374
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK+ + ++ +Y ++ ARK+F+ + + + T+N+++ A+++ E
Sbjct: 279 MIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEA 338
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVGSSML 118
+ + +M K + + TF L AC +K G+ + K +L D FV +++
Sbjct: 339 VSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFV--TVV 396
Query: 119 NLYVKCGKMNEAMVAFEKM 137
L + G +N A+V KM
Sbjct: 397 ALLGRAGLLNFALVFIFKM 415
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/532 (31%), Positives = 292/532 (54%), Gaps = 10/532 (1%)
Query: 23 KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVA 82
+ + AR LF+E+P R V + +++ Y+ E L ++ +M+ P+ T +
Sbjct: 16 RGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSV 75
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK-MNEAMVAFEKM-QRK 140
L AC M + AV G +V +++++ Y + + +A F+ + +
Sbjct: 76 LTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGR 135
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
W+SMI G GQ R + +K M K+G++ + AC + D G +H
Sbjct: 136 TAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLH 195
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
I++ L++++ V SL+DMY + A +F N++TW +I+G++Q
Sbjct: 196 LQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCDPLM 255
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
+ L+LL+EM EP+ +L S ACA + L+ GK +HG +RR + +L +G +++
Sbjct: 256 A-LQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALV 311
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
DMYSKCG + A+ +FD+M +D SW +IA YG++G+G EA+ LF MI V PDH
Sbjct: 312 DMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHV 371
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
F SL+S+ SH+GLV+EG +F M+++Y +QP ++ Y +V+LLARAG + EAL ++D+
Sbjct: 372 VFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDT 431
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
M P VW ALL H +G A+K+ ++NPDD+ + ++++ +A KW E
Sbjct: 432 MPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEY 491
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQY---EDIVYVLKK 548
A R+++R G +K G S +EV ++++F D S Q ++++++L +
Sbjct: 492 AFTRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSSSPQVCLADEVLHILSQ 543
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L V +I +Y I+ AR LF+ P R + T+N++I YS+ + P L
Sbjct: 199 IKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCD-PLMAL 257
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L +M E P+ T T AC L L+ G+++ + Y +D+ +G++++++Y
Sbjct: 258 QLLLEMNDE---PNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMY 314
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + A F++M KD W+SMI G NG EAV + M G+ D VV +
Sbjct: 315 SKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFL 374
Query: 182 GLIQACADLGDSRFGLSVHGYSIRR------HLNLDVKVQTSLVDMYAKTGHLDLASHVF 235
LI +C S GL G++ R +L + +V S+V++ A+ G L A +
Sbjct: 375 SLISSC-----SHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLI 429
Query: 236 KNMS-RINIVTWGALI 250
M + WGAL+
Sbjct: 430 DTMPFAPDEYVWGALL 445
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
K T+ + G + A +F M ++V W A++SG+A NGL L++ M +
Sbjct: 4 KHATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAA 63
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC--GVPS 329
G P+ +L S L AC + +H VRR D + ++ID Y+ GV
Sbjct: 64 GAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVD 123
Query: 330 CARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
AR LFD + S R SW +IA Y G L LF M++ V + STFA
Sbjct: 124 -ARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGV--ELSTFA 174
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+ I G ARALFD+M RD+++W +++ Y +G EAL +F +M+
Sbjct: 6 ATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 375 KPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
P+ T +S+L+A H+ V G D M Y + YA +
Sbjct: 66 APNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRG---VDRM--PYVVNALIDSYASL--- 117
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
A V +A ++ D++ + A W ++++G + G ++ K +LK
Sbjct: 118 ---AEGVVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLK 165
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 303/552 (54%), Gaps = 48/552 (8%)
Query: 36 LPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ--MIKEDVRPDSSTFTVALKACVSLMDLK 93
L + YN+++ A+S+ + + +N ++ PD TFT LKAC L +
Sbjct: 85 LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144
Query: 94 MGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLV 153
G+++ + G +++FV +S+++LY K G A F++M +D+V W+++I+G
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC 204
Query: 154 FNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVK 213
F+G +D +V G+++ ++
Sbjct: 205 FSGM---------------VDKARMVFDGMMEK------------------------NLV 225
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SC 272
++++ YA+ G+L+ A +F+NM N+V+W A+I+G+AQN +EL +MQ
Sbjct: 226 SWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEG 285
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCA 331
G P+ V+LVS L ACA +G L LGK IH + R + + L LG ++ DMY+KCG A
Sbjct: 286 GLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEA 345
Query: 332 RALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
+ +F +M RD+ISW++II ++G+ EA + F +MIE ++P+ +F LL+A +H+
Sbjct: 346 KGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHA 405
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
GLV++G +FD+M Y I P +HY C+VDLL+RAG +++A +++SM +P + VW A
Sbjct: 406 GLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGA 465
Query: 452 LLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM 511
LL GC +K GE+V ++L+L+ + G ++N +A + ++ A R MR +
Sbjct: 466 LLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKS 525
Query: 512 KKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI-----SSWLQGHMEE 566
K PG S +E+N ++ F M D SH Q I ++++L +M+ + + +++E
Sbjct: 526 MKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDE 585
Query: 567 HEEHDPLSTAAQ 578
E+ D LST ++
Sbjct: 586 EEKEDALSTHSE 597
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 139/263 (52%), Gaps = 23/263 (8%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
M++ NL ++ +I+ Y ++ AR+LFE +P+R V ++N++I Y++ E +
Sbjct: 219 MMEKNLVSWST----MISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADA 274
Query: 61 LGLYNQMIKED-VRPDSSTFTVALKACVSLMDLKMGEEIWR----KAVELGYGNDVFVGS 115
+ L+ QM E + P+ T L AC L L +G+ I R +E+G +F+G+
Sbjct: 275 IELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVG----LFLGN 330
Query: 116 SMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
++ ++Y KCG + EA F +M +D++ WS +I GL G EA + + M ++G++
Sbjct: 331 ALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP 390
Query: 176 DEVVMMGLIQACA-----DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
+++ MGL+ AC D G F + Y I ++ +VD+ ++ G LD
Sbjct: 391 NDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGI----TPKIEHYGCVVDLLSRAGRLDQ 446
Query: 231 ASHVFKNMS-RINIVTWGALISG 252
A + +M + N++ WGAL+ G
Sbjct: 447 AESLINSMPMQPNVIVWGALLGG 469
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 293/540 (54%), Gaps = 54/540 (10%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y N++ A+KLF LP + +YN+II+ Y+R + LGL D +
Sbjct: 319 MYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG---LGL-----------DEVS 364
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
+ A +AC + G ++ +++ +++ V +++L++Y KCG + EA + FE+M
Sbjct: 365 LSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV 424
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D V W+++I NG + + +
Sbjct: 425 SRDAVSWNAIIAAHEQNGNEEKTLSLF--------------------------------- 451
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA---Q 255
+H I+ L LD V +L+DMY+K G ++ A + ++ +V+W A+ISGF+ Q
Sbjct: 452 IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQ 511
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ A T ++EM G +PD+ + + L CA + ++LGK IH +++ + +
Sbjct: 512 SEEAQKTFSKMLEM---GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYI 568
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMYSKCG + +F++ +RD ++WN ++ Y HG GEEAL +F M V
Sbjct: 569 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 628
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+H+TF ++L A H GLVE+G ++F M+S Y + P +HY+C+VD++ R+G+V +AL
Sbjct: 629 KPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKAL 688
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++++ M E +W LLS C H + EK A +L+L P+D + L+SN +A
Sbjct: 689 ELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAG 748
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
W EV +RK MR +G+KK PG S +E+ E+HAF++ DK+H + ++I L L EM+
Sbjct: 749 MWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK 808
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 239/461 (51%), Gaps = 25/461 (5%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y G+ DI A+KLF+ +P R V ++NS+I Y +V+ ++ QM + D +TF
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
V LK+C SL D G +I AV++G+ DV GS++L++Y KC K++ ++ F M
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
K+ V WS++I G V N R ++ +K M+K G+ + + ++CA L R G +
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQL 297
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
HG++++ DV + T+ +DMY K +L A +F ++ N+ ++ A+I G+A++
Sbjct: 298 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK- 356
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSV 318
G D VSL A ACA I G +HG +++ N+ + ++
Sbjct: 357 -------------GLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAI 403
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL--QMIETMVKP 376
+DMY KCG A +F++M SRD +SWN IIA++ +G+ E+ LSLF+ ++I++ +
Sbjct: 404 LDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGL 463
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D +L+ S G++E+ D + + T + ++ + + EEA K
Sbjct: 464 DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ-----TVVSWNAIISGFSLQKQSEEAQKT 518
Query: 437 VD---SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
M +P + +L C N +G+++ +++K
Sbjct: 519 FSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 559
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 216/456 (47%), Gaps = 53/456 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + + + F +P + ++++II + + L L+ +M K V
Sbjct: 215 LLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS 274
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
STF ++C L L++G ++ A++ +G DV +G++ L++Y+KC +++A F
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +L ++++I G Y R K G+ DEV + G +ACA +
Sbjct: 335 SLPNHNLQSYNAIIVG-------------YARSDK-GLGLDEVSLSGAFRACAVIKGDLE 380
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL VHG S++ ++ V +++DMY K G L A VF+ M + V+W A+I+ Q
Sbjct: 381 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 440
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
NG TL L IH ++ R + +
Sbjct: 441 NGNEEKTLSLF---------------------------------IHNRIIKSRLGLDSFV 467
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++IDMYSKCG+ A L D++ + ++SWN II+ + + EEA F +M+E V
Sbjct: 468 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 527
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD+ T+A++L ++ VE G+ ++ K ++Q + +VD+ ++ G +++
Sbjct: 528 DPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQD-F 585
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+++ + W A++ G H +GE+ K
Sbjct: 586 QLIFEKAPNRDFVTWNAMVCGYAQH---GLGEEALK 618
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 234/540 (43%), Gaps = 99/540 (18%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
++R LF P+R + S +SPF+ L + + TF+ + C
Sbjct: 5 TSRHLF---PIRFFFNFQS--------KSPFKTLPISPFSSYQATPTKKKTFSHIFQECS 53
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC----------------------- 124
L G++ + + + VFV + ++ +Y+KC
Sbjct: 54 DRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNA 113
Query: 125 --------GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
G + A F+ M +D+V W+S+I+G + NG R+ +D + +M + G D
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFD 173
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++++C+ L D G+ +HG +++ + DV ++L+DMYAK LD + F
Sbjct: 174 RTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFH 233
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+M N V+W A+I+G QN LEL EMQ G + S +CA + L+L
Sbjct: 234 SMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRL 293
Query: 297 GKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY-- 353
G +HG+ ++ F ++V+GT+ +DMY KC S A+ LF+ + + +L S+N II Y
Sbjct: 294 GSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR 353
Query: 354 ---------------------------GIHGHGEEALSL----------FLQM------- 369
G+ HG SL L M
Sbjct: 354 SDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 413
Query: 370 ------IETMVKPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQPTEKHYACMVD 422
E MV D ++ ++++A +G E+ F + K ++ ++D
Sbjct: 414 VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALID 473
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDL 480
+ ++ G +E+A K+ D ++ E + W A++SG K+ +K K+L++ +PD+
Sbjct: 474 MYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 532
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 130/239 (54%), Gaps = 4/239 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A KL + L + V ++N+II +S ++ E +++M++ V PD
Sbjct: 471 LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 530
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T+ L C +L+ +++G++I + ++ +D ++ S+++++Y KCG M + + FE
Sbjct: 531 NFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFE 590
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K +D V W++M+ G +G EA+ ++ M+ E + + + +++AC +G
Sbjct: 591 KAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEK 650
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
GL + +S+ + LD +++ + +VD+ ++G + A + + M + V W L+S
Sbjct: 651 GLH-YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 708
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L + ++ +Y ++ + +FE+ P R T+N+++ Y++ E
Sbjct: 557 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 616
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSML 118
L ++ M E+V+P+ +TF L+AC + ++ G + + YG D + S ++
Sbjct: 617 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLS-NYGLDPQLEHYSCVV 675
Query: 119 NLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVD-AYKRMKKEGIDAD 176
++ + G++++A+ E M D V W ++++ +G A AY ++ E D+
Sbjct: 676 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSA 735
Query: 177 EVVMMGLIQACADL 190
V++ I A A +
Sbjct: 736 AYVLLSNIYANAGM 749
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 270/487 (55%), Gaps = 1/487 (0%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C + G+ + + LG D + ++N+Y KCG + A F+++ + +
Sbjct: 5 LQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSM 64
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W+ MI V NG+ +A+D + M++EG E + ++ ACA GD F +H +
Sbjct: 65 VSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAF 124
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+I+ ++ DV V T+L+D+YAK G ++ AS VF+ M N VTW ++++GF QN L
Sbjct: 125 AIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEG 184
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L L + G E + + S + ACA + L G+ +H R F N + ++++DM
Sbjct: 185 LVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDM 244
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG A LF ++ ++++ WN II+ + H E ++LF +M +T ++PD T+
Sbjct: 245 YAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTY 304
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
++LSA H GLV++GR +FDLM ++ + P HY+CMVD+L R G V EA +++ M
Sbjct: 305 VAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMP 364
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
++W +LL+ C H + E AK + ++ PD G + L++N +A +KWEE A
Sbjct: 365 FAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAK 424
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQ 561
RK+++ S + K G S +E+ ++H F+ +++H + DI L L EM + + +
Sbjct: 425 ARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNLLEEMTKLVNKAE 484
Query: 562 GHMEEHE 568
+ H+
Sbjct: 485 TDFDLHD 491
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 221/450 (49%), Gaps = 24/450 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I A K+F+E+P R + ++N +I + + + ++ +M +E
Sbjct: 39 LMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCS 98
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + + AC + D+ ++ A++ DVFVG++++++Y KCG + +A FE
Sbjct: 99 EFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFE 158
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++ V WSS++ G V N E + + R K+ G++ ++ ++ +I+ACA L
Sbjct: 159 GMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIE 218
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH R + V ++LVDMYAK G ++ A +F N+ + N+V W A+ISGFA+
Sbjct: 219 GRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAK 278
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLV 313
+ + + L EMQ G +PD V+ V+ L AC +G + G+S R + N++
Sbjct: 279 HACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVL 338
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++D+ + G+ A L +M S W ++AS IHG+ E A + E
Sbjct: 339 HYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFE- 397
Query: 373 MVKPDHSTFASLLS-----------------ALSHSGLVEE-GRYWFDLMVSKYKIQPTE 414
++PD LL+ +L S +++E G+ W ++ + E
Sbjct: 398 -MEPDRGGNYVLLANTYAASKKWEEAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGE 456
Query: 415 KHYACMVDL-LARAGEVEEALKIVDSMSTE 443
+ + + D+ L +EE K+V+ T+
Sbjct: 457 RTHPRITDIYLELNNLLEEMTKLVNKAETD 486
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 3/278 (1%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+Q CA + G + HG IR L D L++MY+K G + A VF + +
Sbjct: 4 LLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERS 63
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W +I QNG +++ +EMQ G ++ S + ACA G + + +H
Sbjct: 64 MVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHA 123
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+ ++ D ++ +GT++ID+Y+KCG A +F+ M R+ ++W+ I+A + + EE
Sbjct: 124 FAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEE 183
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
L LF + E ++ + +S++ A + + EGR +V + P + +V
Sbjct: 184 GLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQ-VHAIVCRTGFGPNNFVASALV 242
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
D+ A+ G +EEA + ++ + + +W A++SG H
Sbjct: 243 DMYAKCGSIEEAYVLFCNIE-KKNVVLWNAIISGFAKH 279
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 258/467 (55%), Gaps = 39/467 (8%)
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD--LGDSRFGLSV 199
+V W+S I NGQ EA + RM+ G+ + + + L+ AC D L RFG S+
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 200 HGYSIRRHLNLD---VKVQTSLVDMYAKTGHLDLA------SHV---------------- 234
H Y R L LD V V T+LVDMY+K G LDLA HV
Sbjct: 114 HAYV--RKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRN 171
Query: 235 ---------FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
F MS + ++W ++I GF + G LE EMQ G EPD V+++S L
Sbjct: 172 GEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVL 231
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
ACA +G L LG I+ + +++ F N+ + S+IDMYS+CG AR +F+QM R L+
Sbjct: 232 AACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLV 291
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SWN +I + ++GH EEAL F M + +PD +F L+A SHSGLV+EG +FD+M
Sbjct: 292 SWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIM 351
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
KI P +HY C+VDL +RAG +E+AL ++ +M +P V +LL+ C H +
Sbjct: 352 KRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGL 411
Query: 465 GEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNG 524
E++ K + +++P + L+SN +A +W+ + VRK M+ G+ K PG+S +E++G
Sbjct: 412 AERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDG 471
Query: 525 ELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEHEEHD 571
+H F+ DK+H + ++I +L L+LE+R + + + EHD
Sbjct: 472 SIHEFVAGDKTHVETQNIYAMLDHLFLELRICGYVPEIEVGKSYEHD 518
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 4/251 (1%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF+++ R ++ S+I + +K + L + +M V PD T L AC +L
Sbjct: 180 LFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGA 239
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
L +G I R ++ + +++ + +S++++Y +CG + A FE+M ++ LV W+SMI G
Sbjct: 240 LGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVG 299
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR-RHLNL 210
NG EA++ + M+KEG D V G + AC+ G GL R R ++
Sbjct: 300 FALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISP 359
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEM 269
++ LVD+Y++ G L+ A +V NM + N V G+L++ +G G L+ +
Sbjct: 360 RIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYL 419
Query: 270 QSCGFEPDSVS 280
C +P S S
Sbjct: 420 --CEVDPGSDS 428
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 64/285 (22%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I AR++FE++P R + ++NS+I+ ++ E L +N M KE RPD
Sbjct: 265 LIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPD 324
Query: 76 SSTFTVALKAC--VSLMDLKMG-EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+FT AL AC L+D + +I ++ ++ + + +++LY + G++ +A+
Sbjct: 325 GVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHY--GCLVDLYSRAGRLEDALN 382
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
M K +EVV+ L+ AC GD
Sbjct: 383 VIANMPMK----------------------------------PNEVVLGSLLAACRTHGD 408
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ Y D L ++YA G D AS V K M + I G
Sbjct: 409 VGLAERLMKYLCEVDPGSDSNY-VLLSNIYAAVGRWDGASKVRKKMKALGIHK----KPG 463
Query: 253 FAQNGLAGSTLE--------------------LLMEMQSCGFEPD 277
F+ + GS E L +E++ CG+ P+
Sbjct: 464 FSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRICGYVPE 508
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 258/479 (53%), Gaps = 3/479 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SAR++F+ + +N++I + E LGL+ +M E VR D
Sbjct: 146 LINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRID 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++ L AC +L DL G I A G D+ V +++ N+Y KC +++ A F+
Sbjct: 206 KVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFD 265
Query: 136 KMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M K ++V W+SMI +G+ REA++ Y+ MK+EG+ D++ G + AC G S
Sbjct: 266 GMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSA 325
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H + DV + T++V+MYAK G L+ A F+ M R N VTW A++ F
Sbjct: 326 KGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFI 385
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG--YTVRRFDFNL 312
Q G L+L + M S GF+P ++L AL AC++IG L+ GK+IH L
Sbjct: 386 QQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCL 445
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L S+++MY+KCG + A +F +Q RD SWN II + HG +E LSL +M++
Sbjct: 446 FLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQD 505
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD+ TFA +L A SH+GL++ GR F M Y I+P HY C+VD+L+RAG E
Sbjct: 506 GVDPDYVTFACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWARE 565
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A + +M P W LL C H + G + A+ +L+L + + L+SN A
Sbjct: 566 AEALAMAMPFTPRPVTWTTLLGACKLHGETKRGVEAARSLLELGFECSSSYVLLSNLVA 624
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 235/407 (57%), Gaps = 11/407 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ Y D+ SARK+F+ + + + ++NS+++AYS+ E+L L+ +M DV PD
Sbjct: 48 LVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPD 104
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T+ L AC ++ L++G+E+ + + +D + ++++N+Y KCG + A F+
Sbjct: 105 SITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFD 164
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q D W++MI+GLV +G+ REA+ ++RMK E + D+V + ++ AC L D
Sbjct: 165 GIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHE 224
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFA 254
G+ +H ++ ++ D+ V+T++ +MY+K +DLA +F M+ + N+V+W ++I+ +A
Sbjct: 225 GIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYA 284
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLV 313
Q+G LEL M+ G +PD ++ AL AC G G IH T + ++
Sbjct: 285 QSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVF 344
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L T++++MY+KCG A + F++M+ ++ ++W+ ++ ++ G+ EAL L+L+M+
Sbjct: 345 LDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEG 404
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+P T A L+A S G ++EG+ +IQ TE C+
Sbjct: 405 FQPSEITLAGALAACSRIGALQEGK------AIHSRIQATETLQNCL 445
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 10/389 (2%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+ E RP+ TF+ +C +L + I + ++V V +S+++ Y + G
Sbjct: 1 MLLEGFRPNGVTFSGVASSCSGREEL---DTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ A F+ ++ KDL+ W+SM+ +G E ++ +++M ++ D + ++ A
Sbjct: 58 LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGA 114
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
C+ + G VH R D + +L++MY+K G L+ A VF + ++ W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TV 305
A+ISG Q+G A L L M++ D VS ++ L AC + L G IH + +
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASA 234
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALS 364
D +LV+ T+V +MYSKC AR +FD M + +++SWN +IA+Y G G EAL
Sbjct: 235 CGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALE 294
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
L+ M E V+PD T+A L A + G +G +++ KI+ +V++
Sbjct: 295 LYELMKEEGVQPDDITYAGALGACTSYGGSAKGAE-IHSRITESKIRTDVFLDTAIVNMY 353
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALL 453
A+ GE+E A+ + M + + W A++
Sbjct: 354 AKCGELETAMSYFEKMRRKNAV-TWSAMV 381
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCAR 332
GF P+ V+ +C+ G +L F N+V+ S++ Y++ G AR
Sbjct: 5 GFRPNGVTFSGVASSCS--GREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSAR 62
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+FD ++++DLISWN ++ +Y HGHGEE L LF +M V+PD T+AS+L A S
Sbjct: 63 KVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSAME 119
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM-STEPGLAVWVA 451
L+E G+ VS+ + + A ++++ ++ G +E A ++ D + S +P + W A
Sbjct: 120 LLELGKE-VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDP--SPWNA 176
Query: 452 LLSGCHNHKK 461
++SG H +
Sbjct: 177 MISGLVQHGR 186
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 302/545 (55%), Gaps = 7/545 (1%)
Query: 11 NSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-K 69
N + +I LY +++ ARKLF+ +P R V ++++++ Y + +P EV L+ +M+ K
Sbjct: 58 NQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVK 117
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+++ P+ A+ +C S M ++ G++ A++ G +V ++++ LY KC +
Sbjct: 118 DNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGA 176
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A+ + D+ C++ ++NGL+ + EAVD K + EGI+ + + + + CA
Sbjct: 177 AIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCAS 236
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L D G VH ++ ++ DV + +S++DMY K G++ F + N+V+W ++
Sbjct: 237 LKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSI 296
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I+ + QN L L +M+ P+ ++ + A + L LG +H +
Sbjct: 297 IAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGL 356
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N+++G ++I MY K G A+++F M ++I+WN II + HG G+EALS+F
Sbjct: 357 KGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQD 416
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ T +P++ TF ++ A +H LV+EG Y+F+ ++ +++I P +HY C+V LL+R+G
Sbjct: 417 MMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSG 476
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++EA + S + W LL+ C+ HK + G K+A+ +L+L P D+G + L+SN
Sbjct: 477 RLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSN 536
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVY 544
A ++W+ V +RK MR+ +KK PG S +E+ H F ED H + YE++
Sbjct: 537 MHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKD 596
Query: 545 VLKKL 549
+L K+
Sbjct: 597 LLSKI 601
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 189/376 (50%), Gaps = 10/376 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+ L + +I LY +D+ +A ++ +P + YN ++ + E +
Sbjct: 150 LKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAV 209
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ +I E + +++T+ + C SL D+ +G+++ + ++ DV++GSS++++Y
Sbjct: 210 DVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMY 269
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + F+++Q +++V W+S+I N EA++ + +M+ + I +E M
Sbjct: 270 GKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMA 329
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L + A L G +H + + L +V V +L+ MY K+G + A VF NM+
Sbjct: 330 VLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCC 389
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
NI+TW A+I+G + +GL L + +M + G P+ V+ + +LACA + + G
Sbjct: 390 NIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYF 449
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIH 356
+ +++ F +V G T ++ + S+ G A Q + D++SW ++ + +H
Sbjct: 450 NHLMKQ--FRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVH 507
Query: 357 GH---GEEALSLFLQM 369
H G + LQ+
Sbjct: 508 KHYDKGRKIAEYLLQL 523
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 272/497 (54%), Gaps = 1/497 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D S + L+ C L +G+ A+ G D + ++NLY KCG+ + A + F
Sbjct: 56 DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M + +V W++MI G +G+ +A+ + RM +EG E + I ACA
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H +++ L+ + V T+++D+YAK + A VF+ M +VTW +L +G+
Sbjct: 176 ECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYV 235
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QNGL L L Q G E +L + L ACA + G +H ++ F N
Sbjct: 236 QNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFF 295
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++D+Y++CG A ALF M+ ++++ WN +IAS+ H H EA+ LF +M +
Sbjct: 296 VAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLG 355
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ P+ T+ S+LS SH+GLVE+GR++F L++S ++P HY+CMVD+L R+G+ +EA
Sbjct: 356 IFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEA 415
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++++ M EP ++W +LL C N+ + A+++ +L PD+ G H L+SN +A
Sbjct: 416 WELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAAS 475
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
WE V RK ++ SG KK G S +E G++H F++ ++ H + DI L+++Y EM
Sbjct: 476 GNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEM 535
Query: 554 RAISSWLQGHMEEHEEH 570
R + + H+ H
Sbjct: 536 RKFARRTSIECDLHDVH 552
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 177/329 (53%), Gaps = 10/329 (3%)
Query: 16 IIALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I LY G+ND AR +F+ + +R + ++N++I Y+ + L L+++M +E
Sbjct: 98 LINLYTKCGRND--CARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTH 155
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
T + + AC + + +++ A++L ++ FVG+++L++Y KC + +A
Sbjct: 156 MSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWV 215
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FEKM + LV WSS+ G V NG EA+ ++ ++EG++ E + ++ ACA L
Sbjct: 216 FEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALK 275
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G+ +H ++ + + V SLVD+YA+ G ++ A +F M N+V W A+I+ F
Sbjct: 276 IEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASF 335
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV----RRFD 309
+++ + + L +MQ G P+ V+ +S L C+ G ++ G+ H +++ R +
Sbjct: 336 SRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGR--HYFSLLMSDRTVE 393
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQM 338
N++ + ++D+ + G A L ++M
Sbjct: 394 PNVLHYSCMVDVLGRSGKTDEAWELLNKM 422
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y N I A +FE++P R + T++S+ Y + E L L+ +E V
Sbjct: 199 ILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELT 258
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC SL G ++ ++ G+ + FV +S++++Y +CG++ +A F
Sbjct: 259 EFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFA 318
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ K++V W++MI + EA+ +++M++ GI +EV + ++ C+ G
Sbjct: 319 YMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEK 378
Query: 196 GLSVHGYSI---RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
G H +S+ R + +V + +VD+ ++G D A + M WG+L+
Sbjct: 379 GR--HYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLL- 435
Query: 252 GFAQN----GLAGSTLELLMEMQSCGFEPDS 278
G +N LA E L ++ EPD+
Sbjct: 436 GSCRNYNNIRLARIAAEQLFQL-----EPDN 461
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/601 (29%), Positives = 302/601 (50%), Gaps = 60/601 (9%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ YG + A ++F E+P +N II + E + + L+ +M ++ +
Sbjct: 715 LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 774
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++T L+AC + L ++I G +DV + + ++++Y K GK+ A F+
Sbjct: 775 TATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFD 834
Query: 136 KMQRK-----------------------------------DLVCWSSMINGLVFNGQPRE 160
M+ + D+V W+ +++G +G E
Sbjct: 835 SMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEE 894
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
++ +RM+ EG + M ++QA ++LG G HGY +R + DV V TSL+D
Sbjct: 895 VLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID 954
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD--- 277
MY K L A VF NM NI W +L+SG++ G+ L LL +M+ G +PD
Sbjct: 955 MYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014
Query: 278 ---------------------SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
S S+ L ACA + L+ GK IH ++R F ++ +
Sbjct: 1015 WNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 1074
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
T++IDMYSK A +F ++Q++ L SWN +I + I G G+EA+S+F +M + V
Sbjct: 1075 TALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVG 1134
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALK 435
PD TF +LLSA +SGL+ EG +FD M++ Y+I P +HY CMVDLL RAG ++EA
Sbjct: 1135 PDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWD 1194
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQK 495
++ +M +P +W ALL C HK E AK + KL P++ + L+ N +++ +
Sbjct: 1195 LIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNR 1254
Query: 496 WEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
WE++ +R+ M +G++ +S +++N +H F ++K H I + L +L EM+
Sbjct: 1255 WEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKK 1314
Query: 556 I 556
+
Sbjct: 1315 L 1315
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 211/419 (50%), Gaps = 37/419 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE-VLGLYNQMIKEDVRP 74
+I+ Y G D SA +F R +NS + + VL ++ ++ + V
Sbjct: 613 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 672
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS ++VALK C +MD+ +G EI ++ G+ DV++ +++N Y +C + +A F
Sbjct: 673 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 732
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+M + + W+ I + + + ++ V+ +++M+ + A+ ++ ++QAC +G
Sbjct: 733 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALN 792
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN------------ 242
+HGY R L+ DV + L+ MY+K G L+LA VF +M N
Sbjct: 793 AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 852
Query: 243 -----------------------IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
IVTW L+SG +G L +L MQ GF+P+S
Sbjct: 853 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 912
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
S+ S L A +++GFL +GK HGY +R FD ++ +GTS+IDMY K A+A+FD M
Sbjct: 913 SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM 972
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
++R++ +WN +++ Y G E+AL L QM + +KPD T+ ++S + G +
Sbjct: 973 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN-GQPREAVDAYKRMKKEG 172
++++ Y+ G A + F ++ + W+S + + G ++ +K + +G
Sbjct: 610 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLAS 232
+ D V ++ C + D G+ +HG I+R +LDV ++ +L++ Y + L+ A+
Sbjct: 670 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 729
Query: 233 HVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG 292
VF M + W I Q+ +EL +MQ + ++ ++V L AC ++G
Sbjct: 730 QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 789
Query: 293 FLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L K IHGY R D ++ L +I MYSK G AR +FD M++R+ SWN +I+
Sbjct: 790 ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
SY G +A SLF ++ + +KPD T+ LLS G EE
Sbjct: 850 SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEE 894
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 279/503 (55%), Gaps = 21/503 (4%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M++ DV P ++F++ L++C + ++GE + +++G+ D+ + + +L+ Y K G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
+ A F M R+D+V ++MI+ L +G EA + + M + + +I
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITC 116
Query: 187 CADLGD---SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRIN 242
LGD +R + DV +++D Y K+ L A +F M S N
Sbjct: 117 YCKLGDINSARLMFDCNPVK-------DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARN 169
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
VTW +IS + Q G G+ + + +MQS +P V++VS L ACA +G L +G+ IHG
Sbjct: 170 SVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHG 229
Query: 303 YT-VRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
Y +R ++VLG ++IDMY KCG A +F + +++ WN II G++G GEE
Sbjct: 230 YIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEE 289
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A++ F+ M + +KPD TF +LS SHSGL+ G+ +F M+ Y ++P +HY CMV
Sbjct: 290 AIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMV 349
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
DLL RAG ++EAL+++ +M +P V +LL C HK +GE+V +++L+L+P D G
Sbjct: 350 DLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGG 409
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ +SN +A +W++V RK M K G+ K PG S +EVN +H F+ D SH Q+
Sbjct: 410 NYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQ 469
Query: 542 IVYVLKKLYLEMRAISSWLQGHM 564
I L ++ E++ QGH+
Sbjct: 470 INAFLDEIAKELKG-----QGHV 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 16 IIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
II Y +V+A++LF + R T+N++I AY + + ++ QM E+V+P
Sbjct: 144 IIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKP 203
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T L AC L L MGE I DV +G++++++Y KCG + A+ F
Sbjct: 204 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVF 263
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ RK++ CW+S+I GL NG+ EA+ A+ M+KEGI D V +G++ C+ G
Sbjct: 264 HGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLS 323
Query: 195 FG-------LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTW 246
G L V+G L V+ +VD+ + G+L A + + M + N +
Sbjct: 324 AGQRYFSEMLGVYG------LEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVL 377
Query: 247 GALISG---FAQNGLAGSTLELLMEMQSC 272
G+L+ L + L+E+ C
Sbjct: 378 GSLLRACQIHKDTKLGEQVTQQLLELDPC 406
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 44/273 (16%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP--DSSTFTVALKA 85
AR LF+ + R ++NS+I Y + LG N + D P D ++ +
Sbjct: 95 ARNLFDNMTERNSCSWNSMITCYCK-------LGDINSARLMFDCNPVKDVVSWNAIIDG 147
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
L +E++ + +G + ++M++ YV+CG+ A+ F++MQ
Sbjct: 148 YCKSKQLVAAQELF---LLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQ------- 197
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
E + EV M+ L+ ACA LG G +HGY
Sbjct: 198 ------------------------SENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRT 233
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ L +DV + +L+DMY K G L+ A VF +SR NI W ++I G NG +
Sbjct: 234 KRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAA 293
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ M+ G +PD V+ V L C+ G L G+
Sbjct: 294 FIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ 326
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 295/513 (57%), Gaps = 7/513 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
II++Y DI SAR++F+ +P R T+NS+I AY + E L + P
Sbjct: 107 IISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPK 166
Query: 76 SSTFTVALKACVSLMDL--KMGEEIWRKAV---ELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+ C MDL ++G +I V + + VF+ ++ ++ Y +CG A
Sbjct: 167 PELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMA 226
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M+ K+ V W+++I+G N A+ Y+ M+ EG+ + V ++ L+ ACA
Sbjct: 227 RSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARP 286
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGH-LDLASHVFKNMSRINIVTWGAL 249
G ++G +HGY+ RR + +L+ +Y + G L LA +F+ S ++V W ++
Sbjct: 287 GFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSI 346
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I +A+ G + L+L +M++ EP+ V+L++ + AC + K G IHGY ++
Sbjct: 347 IGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGI 406
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
F++ + ++I+MY+KCG +R +F +M SRD ++WN +I++YG+HG+GE+AL F +
Sbjct: 407 GFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYE 466
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M E VK D TF ++LSA +H+GLV EG+ F+ + + +I T +HYAC++DL R+G
Sbjct: 467 MKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSG 526
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++E+AL+I+ +M +P +W +L+S C H + I E ++ ++++ P++ + L+S
Sbjct: 527 KLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSM 586
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
A + +W ++ VR+TM+ ++K G+S +E
Sbjct: 587 IHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 184/387 (47%), Gaps = 23/387 (5%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+KAC G ++ A G D V +S++++Y K + A F+ M +D
Sbjct: 73 IKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDT 132
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA---DLGDSRFGLSV 199
+ W+SMIN + NG EA+ K G ++ ++ C DLG R G +
Sbjct: 133 ITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLG-WRIGRQI 191
Query: 200 HGYSI---RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
HG + R + V + T+ VD Y + G +A VF M N V+W A+ISG A N
Sbjct: 192 HGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANN 251
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
L EMQ G P+ V+L++ L ACA+ GF+K GK IHGY RR FD
Sbjct: 252 QDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFS 311
Query: 316 TSVIDMYSKCGVP-SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++I +Y +CG A +F+ RD++ W+ II SY G ++AL LF +M
Sbjct: 312 PALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEET 371
Query: 375 KPDHSTFASLLSALS------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+P++ T +++SA + H G++ F + S + ++++ A+ G
Sbjct: 372 EPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNA-------LINMYAKCG 424
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
++++ KI M + + W +++S
Sbjct: 425 SLDDSRKIFLEMPSRDSV-TWNSMISA 450
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 158/354 (44%), Gaps = 51/354 (14%)
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
V+ +I+AC+ FG +H + D V S++ MYAK ++ A VF M
Sbjct: 68 VLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTM 127
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ---IGFLK 295
+ +TW ++I+ + QNGL L++L + GF P L S + C + +G+ +
Sbjct: 128 PHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGW-R 186
Query: 296 LGKSIHGYTVR----RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
+G+ IHG V R ++ L T+ +D Y +CG AR++FD+M+ ++ +SW +I+
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG--------RYWFDL 403
+ + AL+ + +M V P+ T +LL+A + G V+ G R FD
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFD- 305
Query: 404 MVSKYKIQPTEKHYAC--------------------------MVDLLARAGEVEEALKIV 437
S + P + C ++ AR GE ++ALK+
Sbjct: 306 --SCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLF 363
Query: 438 DSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+ M TEP +A++S C N F G + +LK +G V N
Sbjct: 364 NKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFG---IGFSIFVCN 414
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 298/545 (54%), Gaps = 29/545 (5%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE 96
P GV T+N+++ + E + + M+ VRPD TF AL AC L L +G
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291
Query: 97 EIWRKAV-ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLV 153
E+ + + + FV S+++++Y ++ A F+ + + L W++M+ G
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351
Query: 154 FNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
G EA++ + RM+ E G+ E + G++ ACA +VHGY ++R + +
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
VQ +L+D+YA+ G ++ A +F + ++V+W LI+G G +L+ EMQ
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471
Query: 273 G------------------FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
G P++V+L++ L CA + GK IHGY +R D ++
Sbjct: 472 GRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIA 531
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ET 372
+G++++DMY+KCG + +RA+FD++ R++I+WNV+I +YG+HG G+EA++LF +M+
Sbjct: 532 VGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSN 591
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
KP+ TF + L+A SHSG+V+ G F M + +QPT +AC VD+L RAG ++E
Sbjct: 592 EAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDE 651
Query: 433 ALKIVDSMSTEPG---LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
A I+ SM EPG ++ W + L C H+ +GE A+++ +L PD+ + L+ N
Sbjct: 652 AYSIITSM--EPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNI 709
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
++ WE+ + VR MR+ G+ K PG S +E++G +H F+ + +H + + + L
Sbjct: 710 YSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDAL 769
Query: 550 YLEMR 554
+ MR
Sbjct: 770 WERMR 774
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 202/409 (49%), Gaps = 25/409 (6%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P ++ AL++ +++ + G + R +L +G V +++L Y +CG + A+
Sbjct: 63 PPAAKSAAALRSLIAVRSIH-GAALRR---DLLHGFTPAVANALLTAYARCGDLTAALAL 118
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG-D 192
F M +D V ++S+I L + A+DA + M EG ++ ++ AC+ L D
Sbjct: 119 FNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAED 178
Query: 193 SRFGLSVHGYSIRR-HLNLDVKVQ-TSLVDMYAKTGHLDLASHVFKNMSRIN-----IVT 245
R G H ++++ L+ D + +L+ MYA+ G +D A +F ++ + +VT
Sbjct: 179 LRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVT 238
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++S Q+G G +E++ +M + G PD ++ SAL AC+Q+ L LG+ +H Y +
Sbjct: 239 WNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVL 298
Query: 306 RRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQS--RDLISWNVIIASYGIHGHGEE 361
+ D N + ++++DMY+ AR +FD + R L WN ++ Y G EE
Sbjct: 299 KDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEE 358
Query: 362 ALSLFLQM-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
AL LF +M E V P +T A +L A + S G+ V K + +
Sbjct: 359 ALELFARMEAEAGVVPSETTIAGVLPACARSETF-AGKEAVHGYVLKRGMADNPFVQNAL 417
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAV-WVALLSGC----HNHKKFSI 464
+DL AR G++E A I ++ EP V W L++GC H H F +
Sbjct: 418 MDLYARLGDMEAARWIFAAI--EPRDVVSWNTLITGCVVQGHIHDAFQL 464
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 285/523 (54%), Gaps = 7/523 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFE 59
+ KT N +I +Y + + ++F E+ + + + +I A+++ S
Sbjct: 375 IFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGR 434
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L+ +M++E +RPD + L S++D L +G I +++G D+ VGSS+
Sbjct: 435 AVELFQRMLQEGLRPDKFCSSSVL----SIIDSLSLGRLIHCYILKIGLFTDISVGSSLF 490
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y KCG + E+ FE+M KD V W+SMI G + +AV ++ M E I D++
Sbjct: 491 TMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQM 550
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ + AC+ L G VHGY++R + +V V +LV+MY+K G + LA VF +
Sbjct: 551 TLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDML 610
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ + + +L+SG+AQNG L L E++ DS ++ S + A A + L +G
Sbjct: 611 PQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGT 670
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H + + + +G+S++ MYSKCG +F+Q++ DLISW +I SY HG
Sbjct: 671 QLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHG 730
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
G EAL ++ M + KPD TF +LSA SH+G+VEEG + M +Y I+P HY
Sbjct: 731 KGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHY 790
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
ACMVDLL R+G ++EA + +++M EP +W LL+ C H +G AK+V++L P
Sbjct: 791 ACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEP 850
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVV 520
+ G + +SN A WE+V +R M +G+KK PG+S V
Sbjct: 851 CEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWSSV 893
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 210/399 (52%), Gaps = 5/399 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K + G +I L+ A ++F+++ V +N+II + + L
Sbjct: 174 LKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVAL 233
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ QM P+S TF+ L AC +L +L+ G + ++ G G DVFVG+++++LY
Sbjct: 234 DLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLY 293
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC M++A+ F +M +++V W+++I+G V A +K M+K G + +
Sbjct: 294 AKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTIT 353
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SR 240
++ AC + + + +H + + LD V ++L++MY+K G +DL+ VF+ M S
Sbjct: 354 SVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMEST 413
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
N+ W +IS FAQ+G G +EL M G PD S L + I L LG+ I
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLI 470
Query: 301 HGYTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y ++ F ++ +G+S+ MYSKCG + +F+QM +D +SW +I + H H
Sbjct: 471 HCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHA 530
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
E+A+ LF +M+ ++PD T + L+A S +E+G+
Sbjct: 531 EQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGK 569
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 249/492 (50%), Gaps = 11/492 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y N +V A +LF++ P V ++N +I ++ S + + +M P+
Sbjct: 87 LMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPN 146
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ L AC +L GE ++ A++ G+ ++ +V + M++L+ K +A+ F+
Sbjct: 147 QFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQ 206
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +++VCW+++I+G V N + A+D + +M + ++ ACA L + F
Sbjct: 207 DVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEF 266
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G V G+ I+ DV V T+++D+YAK +D A F M N+V+W +ISGF Q
Sbjct: 267 GRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQ 326
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ S EM+ G + ++ ++ S L AC + +K +H + + F + +
Sbjct: 327 KDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNV 386
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++I+MYSK GV + +F +M+S ++L W V+I+++ G A+ LF +M++
Sbjct: 387 SSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEG 446
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD +S+LS + L GR + K + + + + ++ G +EE+
Sbjct: 447 LRPDKFCSSSVLSIIDSLSL---GRL-IHCYILKIGLFTDISVGSSLFTMYSKCGSLEES 502
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSNFFA 491
+ + M + ++ W ++++G H ++ +++L ++ PD + + A ++ A
Sbjct: 503 YTVFEQMPDKDNVS-WASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSA 561
Query: 492 ME--QKWEEVAG 501
+ +K +EV G
Sbjct: 562 LHSLEKGKEVHG 573
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 188/385 (48%), Gaps = 10/385 (2%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
++ F+ +S++ Y K M A+ F+K +++ W+ +I+G N ++ + +M
Sbjct: 79 SNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKM 138
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G D ++ ++ AC LG +G V+ +++ + V+ ++D++AK
Sbjct: 139 RFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSF 198
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A VF+++ N+V W A+ISG +N L+L +M F P+S + S L AC
Sbjct: 199 EDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTAC 258
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
A + L+ G+ + G+ ++ ++ +GT++ID+Y+KC A F +M R+++SW
Sbjct: 259 AALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWT 318
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG---RYWFDLM 404
II+ + A F +M + K ++ T S+L+A + +++E W
Sbjct: 319 TIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSW---- 374
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
+ K + ++++ ++ G V+ + ++ M + LA+W ++S
Sbjct: 375 IFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGR 434
Query: 465 GEKVAKKVLK--LNPDDLGIHALVS 487
++ +++L+ L PD +++S
Sbjct: 435 AVELFQRMLQEGLRPDKFCSSSVLS 459
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 293/548 (53%), Gaps = 7/548 (1%)
Query: 12 SVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE 70
SVG +I +Y + AR +F ++ + ++N++I + +G++ +++
Sbjct: 942 SVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRG 1001
Query: 71 DVRPDSSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ PD T L+AC SL + +I A++ G D FV ++++++Y K GKM E
Sbjct: 1002 GLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEE 1061
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F DL W++M++G + +G +A+ Y M++ G A+++ + +A
Sbjct: 1062 AEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGG 1121
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + G + ++R NLD+ V + ++DMY K G ++ A +F + + V W +
Sbjct: 1122 LVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTM 1181
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RF 308
ISG +NG L M+ +PD + + + AC+ + L+ G+ IH TV+
Sbjct: 1182 ISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNC 1241
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
F+ + TS++DMY+KCG AR LF + + + SWN +I HG+ EEAL F +
Sbjct: 1242 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEE 1301
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M V PD TF +LSA SHSGLV E F M Y I+P +HY+C+VD L+RAG
Sbjct: 1302 MKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAG 1361
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+ EA K++ SM E +++ LL+ C G++VA+K+L L P D + L+SN
Sbjct: 1362 RIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSN 1421
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVY 544
+A +WE VA R MRK+ +KK PG+S V++ ++H F+ D+SH + Y + Y
Sbjct: 1422 VYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEY 1481
Query: 545 VLKKLYLE 552
++K++ E
Sbjct: 1482 IMKRIREE 1489
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 224/491 (45%), Gaps = 36/491 (7%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G ++ +Y I AR LF+ + LR V +N ++ AY +E L L+++ + +
Sbjct: 765 AGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGL 824
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD T + S K W+ YG +F +Y
Sbjct: 825 RPDDVTLCTLARVVKS----KQNVLEWQLKQLKAYGTKLF-------MYDD--------- 864
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
D++ W+ ++ + G+ EAVD + M + D + + ++ A L
Sbjct: 865 ---DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNC 921
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +HG +R L+ V V L++MY KTG + A VF M+ +++V+W +ISG
Sbjct: 922 LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVRR-FDF 310
A +GL ++ + +++ G PD ++ S L AC+ + G L IH ++
Sbjct: 982 CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ + T++ID+YSK G A LF DL SWN ++ Y + G +AL L++ M
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101
Query: 371 ETMVKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
E+ + + T A+ +A + GLV ++G+ +V K + ++D+ + G
Sbjct: 1102 ESGERANQITLAN--AAKAAGGLVGLKQGKQ-IQAVVVKRGFNLDLFVISGVLDMYLKCG 1158
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
E+E A +I + + + P W ++SGC + ++ ++ ++ K+ PD+ LV
Sbjct: 1159 EMESARRIFNEIPS-PDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 487 ---SNFFAMEQ 494
S A+EQ
Sbjct: 1218 KACSLLTALEQ 1228
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 28/380 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I +Y + SARKLF+ P R + T+N+I+ A++ K + L+ + + V
Sbjct: 667 LITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVS 724
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
T K C+ E + AV++G DVFV +++N+Y K G++ EA V
Sbjct: 725 ATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVL 784
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M +D+V W+ M+ V G EA+ + + G+ D+V + L +
Sbjct: 785 FDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVV------ 838
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ +V + +++ +K + + MY +++ W +S F
Sbjct: 839 KSKQNVLEWQLKQ-----LKAYGTKLFMYDDD------------DDGSDVIAWNKTLSWF 881
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q G ++ ++M + D ++ V L A + L+LGK IHG VR D +
Sbjct: 882 LQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVV 941
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+G +I+MY K G S AR +F QM DL+SWN +I+ + G E ++ +F+ ++
Sbjct: 942 SVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRG 1001
Query: 373 MVKPDHSTFASLLSALSHSG 392
+ PD T AS+L A S G
Sbjct: 1002 GLLPDQFTVASVLRACSSLG 1021
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 170/376 (45%), Gaps = 28/376 (7%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM--QRK 140
L+ ++ DL +G+ + + G+ D F+ ++++ +Y KCG ++ A F+ +
Sbjct: 633 LRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSR 692
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
DLV W+++++ + R+ ++ +++ + A + + + C S+H
Sbjct: 693 DLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
GY+++ L DV V +LV++YAK G + A +F M ++V W ++ + GL
Sbjct: 751 GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY 810
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVID 320
L L E G PD V+L C +K +++ + +++ GT +
Sbjct: 811 EALLLFSEFNRTGLRPDDVTL------CTLARVVKSKQNVLEWQLKQLK---AYGTKLF- 860
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY S D+I+WN ++ + G EA+ F+ MI + V D T
Sbjct: 861 MYDDDDDGS------------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLT 908
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
F +LS ++ +E G+ ++V + + C++++ + G V A + M
Sbjct: 909 FVVMLSVVAGLNCLELGKQIHGIVV-RSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 441 STEPGLAVWVALLSGC 456
+ E L W ++SGC
Sbjct: 968 N-EVDLVSWNTMISGC 982
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 289/529 (54%), Gaps = 10/529 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
ARKLF+++P T+N++ Y + + + L+ ++ + P+ TF + +K+C
Sbjct: 63 ARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGK 122
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L ++ GEE+ A + G+ ++ FV +S++++Y K G + +A F +M +++V W+++
Sbjct: 123 LEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAI 182
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
ING + G + + + V++ G I++ ++ +R +
Sbjct: 183 INGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIES-KNMAAAR-------ELFDKMP 234
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
N D ++++ YA G +++ VF M N+ +W LI G+ +NGL TLE
Sbjct: 235 NRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKR 294
Query: 269 MQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCG 326
M G P+ +LV+ L AC+++G L +GK +H Y + NL +G +IDMY+KCG
Sbjct: 295 MLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCG 354
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
V A +F+ + +D+ISWN II IHGH +AL +F +M +PD TF +LS
Sbjct: 355 VIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILS 414
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A +H GLV++G +F MV Y I P +HY CMVDLL RAG +++AL + M EP
Sbjct: 415 ACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDA 474
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
+W ALL C +K I E +++++L P++ +VSN + + E+VA ++ M
Sbjct: 475 VIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAM 534
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
R +G +K+PG SV+E N + F D+ H++ E I VLK L + +R+
Sbjct: 535 RDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRS 583
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 138/258 (53%), Gaps = 8/258 (3%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSST 78
Y ++ K+F+E+P R V ++N +I Y + E L + +M+ E V P+ T
Sbjct: 248 YAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFT 307
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L AC L L MG+ + A +GY ++FVG+ ++++Y KCG + A+V F +
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLD 367
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
RKD++ W+++INGL +G +A+ + RMK EG + D V +G++ AC +G + G
Sbjct: 368 RKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGF- 426
Query: 199 VHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG--- 252
++ S+ H ++ +++ +VD+ + G LD A + + M + V W AL+
Sbjct: 427 LYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRL 486
Query: 253 FAQNGLAGSTLELLMEMQ 270
+ +A L+ L+E++
Sbjct: 487 YKNVEIAELALQRLIELE 504
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 177/390 (45%), Gaps = 15/390 (3%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F L++C + L +I + V G ++ FV + + + +++ A F+K+
Sbjct: 15 FITLLRSCKNYERL---HQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ + W++M G + NG R+ V + + + + +I++C L R G
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEE 131
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH + + + V TSL+DMY+K G ++ A VF M N+V W A+I+G+ G
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSV 318
S L P+ ++ ++L I + + + + + + + ++
Sbjct: 192 VVSGRRLF------DLAPERDVVMWSVLISGYIESKNMAAARELFD-KMPNRDTMSWNAM 244
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPD 377
++ Y+ G +FD+M R++ SWN +I Y +G E L F +M +E V P+
Sbjct: 245 LNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPN 304
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T ++LSA S G ++ G+ W + + ++D+ A+ G +E A+ +
Sbjct: 305 DFTLVAVLSACSRLGALDMGK-WVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVF 363
Query: 438 DSMSTEPGLAVWVALLSG--CHNHKKFSIG 465
+ + + ++ W +++G H H ++G
Sbjct: 364 NCLDRKDIIS-WNTIINGLAIHGHAPDALG 392
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I +A +F L + + ++N+II + + LG++++M E PD
Sbjct: 346 LIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPD 405
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
TF L AC + +K G ++ V+ + M++L + G +++A+
Sbjct: 406 GVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFI 465
Query: 135 EKMQ-RKDLVCWSSMI 149
KM D V W++++
Sbjct: 466 RKMPIEPDAVIWAALL 481
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 295/542 (54%), Gaps = 4/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IALY + AR++F+ +P R + N ++ Y+ + L L + D +
Sbjct: 56 LIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LRVADFGLN 112
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ A+ A + MG + A++ G +V S++L++Y +C M+EA+ F+
Sbjct: 113 EYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFD 172
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ ++ ++SMING + GQ + + M + D V + ++ CA +
Sbjct: 173 NVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVL 232
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH +++R L L+V V ++LVDMY K A+ VF+ + NIV+W A+++ + Q
Sbjct: 233 GSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQ 292
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-L 314
N L L+L ++M+ G P+ + AL +CA + LK G ++ T++ + L+ +
Sbjct: 293 NELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPV 352
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++MYSK G AR +F M RD++SWN II Y HG EA+ F M+
Sbjct: 353 CNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEE 412
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P + TF +LSA + GLV+EG Y+ ++M+ + ++P ++HY CMV LL R G ++EA
Sbjct: 413 VPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAE 472
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++S + W +LLS C ++ + +G +VA+++ +L P D+G + L+SN +A
Sbjct: 473 RFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKAN 532
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W+ V VR+ MR+ G++K PG S ++V E+H F EDK H E I L++L +++
Sbjct: 533 RWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIK 592
Query: 555 AI 556
I
Sbjct: 593 VI 594
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 193/374 (51%), Gaps = 11/374 (2%)
Query: 91 DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
+L +G+ + + V DV ++++ LYVKCG++ A F+ M ++ V + +++
Sbjct: 31 ELSLGKAVHARVVRAAR-FDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
G +G+ R+A+ A R+ G+ +E V+ + A A + G HGY+I+ L
Sbjct: 90 GYASSGRHRDAL-ALLRVADFGL--NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAE 146
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
V ++++ MY + H+D A VF N+S N+ + ++I+GF G + ++ M
Sbjct: 147 HPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMV 206
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPS 329
+ D VS V+ L CA + LG +H + RR + N+ +G++++DMY KC P
Sbjct: 207 RNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPH 266
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F+ + ++++SW I+ +Y + E+AL LFL M V+P+ T+A L++ +
Sbjct: 267 EANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA 326
Query: 390 HSGLVEEGRYW--FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
++ G + + + P ++++ +++G VE+A ++ SM ++
Sbjct: 327 GLATLKNGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCRDVVS 383
Query: 448 VWVALLSGCHNHKK 461
W +++ G +H +
Sbjct: 384 -WNSIIIGYAHHGR 396
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L+ + ++ +Y + A K+F+ + V +NS+I + +
Sbjct: 140 IKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGST 199
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ M++ + D ++ L C S ++ +G ++ +A++ +V+VGS+++++Y
Sbjct: 200 SIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMY 259
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC +EA FE + K++V W++++ N +A+ + M+ EG+ +E
Sbjct: 260 GKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYA 319
Query: 182 GLIQACADLGDSRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ +CA L + G ++ +++ H L + V +L++MY+K+G ++ A VF +M
Sbjct: 320 VALNSCAGLATLKNGNALGACTMKTGHWGL-LPVCNALMNMYSKSGSVEDARRVFLSMPC 378
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
++V+W ++I G+A +G A +E +M P V+ + L ACAQ+G + G
Sbjct: 379 RDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 435
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G+ G +VH +R DV +L+ +Y K G L LA VF M N V+ L+
Sbjct: 30 GELSLGKAVHARVVRA-ARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
SG+A +G L LL + F + L SA+ A A + +G+ HGY ++
Sbjct: 89 SGYASSGRHRDALALL---RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ + ++V+ MY +C A +FD + S ++ ++N +I + G + + S+ M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+ + + DH ++ ++L + + V G K +++ + +VD+ +
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQ-VHTQALKRRLELNVYVGSALVDMYGKCDF 264
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKF 462
EA ++ + + E + W A+++ ++ F
Sbjct: 265 PHEANRVFEVLP-EKNIVSWTAIMTAYTQNELF 296
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 299/550 (54%), Gaps = 15/550 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ Y + A+ F + L ++N ++ AY++ P L++ M + VRP+
Sbjct: 73 LVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPN 132
Query: 76 SSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ T + AL AC + +L +G E I +A+E+ D V SS++ +Y +C ++ EA
Sbjct: 133 AVTLSTALLACTAARNLALGRKLNELIASEALEI----DSHVESSLITMYGRCREIEEAE 188
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
AF++ KD+VCW++MI+ N + A++ +RM EGI + L+ ACA
Sbjct: 189 RAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTM 248
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQT-SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D R G++ H + L+ V +LV++Y K G +D A V M V+W A+I
Sbjct: 249 DLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMI 308
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY--TVRRF 308
+ +AQNG A + L M G EP ++L+S + +CA +G L LGK IH + F
Sbjct: 309 AAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSF 368
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFD--QMQSRDLISWNVIIASYGIHGHGEEALSLF 366
+L+L +VI MY KCG AR +F+ +++R +++W +I +Y +G GEEA+ LF
Sbjct: 369 SQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELF 428
Query: 367 LQM-IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+M I+ +P+ TF S+L A SH G +E+ F M + + P HY C+VDLL
Sbjct: 429 QEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLG 488
Query: 426 RAGEVEEALKIV-DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG + EA K++ E + W+A LS C + ++ AK+V +L P+++
Sbjct: 489 RAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRV 548
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
L+SN +A + + +VA +R M+ SG+KK G S +E+N +H F++ D SH + +I
Sbjct: 549 LLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYS 608
Query: 545 VLKKLYLEMR 554
L++L+ E++
Sbjct: 609 ELERLHREIK 618
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 178/400 (44%), Gaps = 15/400 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+ F+G+ +++ Y K G ++ A +AF ++ + W+ ++ NG PR A + M
Sbjct: 66 NTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMC 125
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+G+ + V + + AC + G ++ L +D V++SL+ MY + ++
Sbjct: 126 SQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIE 185
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
A F ++V W A+IS +A N LEL+ M G + + VS L ACA
Sbjct: 186 EAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACA 245
Query: 290 QIGFLKLGKSIH--GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
L+ G + H + + V+ +++++Y KCG AR + D M R +SW
Sbjct: 246 STMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWT 305
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+IA+Y +G+ EA++LF M +P T S++ + + G + G+ + S
Sbjct: 306 AMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSS 365
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP-GLAVWVALLSGCHNHKKFSIGE 466
+ ++ + + G +E A ++ + + + W A++ + + +GE
Sbjct: 366 PSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRA---YAQNGVGE 422
Query: 467 KVAKKVLKLNPDD---------LGIHALVSNFFAMEQKWE 497
+ + ++ D L + S+ +EQ WE
Sbjct: 423 EAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE 462
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LYG + AR++ + +P+R ++ ++I AY++ + E + L+ M E
Sbjct: 274 GTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAE 333
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIW-RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P T + +C L L +G+ I R + + + ++++ +Y KCG + A
Sbjct: 334 PSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELARE 393
Query: 133 AFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACAD 189
FE ++ + +V W++MI NG EA++ ++ M + G + + V + ++ AC+
Sbjct: 394 VFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSH 453
Query: 190 LGD------------SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
LG FG+ G LVD+ + G L A +
Sbjct: 454 LGQLEQAWEHFCSMGPDFGVPPAGDHY-----------CCLVDLLGRAGRLGEAEKLLLR 502
Query: 238 MS--RINIVTWGALISGFAQNG 257
++V W A +S NG
Sbjct: 503 HKDFEADVVCWIAFLSACQMNG 524
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 291/553 (52%), Gaps = 18/553 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRP 74
+I +Y ++ A ++F + R V ++ ++++ + R L L +M + P
Sbjct: 45 LIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAP 104
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T + +LKAC + D G I V GY V SS++ +Y K G++ +A F
Sbjct: 105 NEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVF 164
Query: 135 EKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGI-DADEVVMMGLIQACADLG 191
+ + W++M++G G R+A+ ++ M++ EG DE L++AC+ LG
Sbjct: 165 DGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLG 224
Query: 192 DSRFGLSVH------GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
+R G VH G+S + L +LVDMY K L +A VF+ + R N++
Sbjct: 225 ATREGAQVHAAMTASGFSTASNAIL----AGALVDMYVKCRRLPVAMQVFERLERKNVIQ 280
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W A++ G AQ G LEL G PDS L S + A ++ G+ +H Y +
Sbjct: 281 WTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGI 340
Query: 306 RR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ ++ G S++DMY KCG+P A +F +M++ +++SW ++ G HG G EA++
Sbjct: 341 KDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVA 400
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LF +M V+PD T+ +LLSA SH+GLV+E R +F + ++P +HYACMVDLL
Sbjct: 401 LFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 460
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAGE+ EA ++ +M EP + VW LLS C HK ++G + +L ++ D+ +
Sbjct: 461 GRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYV 520
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI---MEDKSHNQYED 541
+SN A +W E VR MR+ G+KK G S VEV E+H F E+++H Q D
Sbjct: 521 TLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGD 580
Query: 542 IVYVLKKLYLEMR 554
I VL+ + MR
Sbjct: 581 IRRVLRDMETRMR 593
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 193/388 (49%), Gaps = 17/388 (4%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+A L+ G ++ ++G+G+D +G++++++YVKCG+++ A F M+ +++
Sbjct: 11 LRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNV 70
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLGDSRFGLSVHG 201
V W++++ G + +G + M+ A +E + ++AC +GD+ G+ +HG
Sbjct: 71 VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 130
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQNGLAG 260
+R V +SLV +Y+K G + A VF I TW A++SG+A G
Sbjct: 131 LCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGR 190
Query: 261 STLELLMEMQ--SCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDF--NLVLG 315
L + EM+ +PD + S L AC+ +G + G +H T F N +L
Sbjct: 191 DALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILA 250
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
+++DMY KC A +F++++ +++I W ++ + G EAL LF + + +
Sbjct: 251 GALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGAR 310
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ-PTEKHYAC---MVDLLARAGEVE 431
PD +S++ L+ LVE+GR V Y I+ PT + +VD+ + G +
Sbjct: 311 PDSHVLSSVVGVLADFALVEQGR-----QVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPD 365
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNH 459
EA ++ M P + W +++G H
Sbjct: 366 EAERMFREMRA-PNVVSWTTMVNGLGKH 392
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 7/283 (2%)
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ GL++A A R G+ +HG + D + +L+DMY K G LDLA VF M
Sbjct: 6 MIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGM 65
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLG 297
N+V+W AL+ GF ++G A L LL EM++ P+ +L ++L AC +G G
Sbjct: 66 RDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAG 125
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGI 355
IHG VR + + V+ +S++ +YSK G AR +FD + +WN +++ Y
Sbjct: 126 VGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185
Query: 356 HGHGEEALSLFLQMI--ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQP 412
GHG +AL +F +M E +PD TFASLL A S G EG M S +
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS 245
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+VD+ + + A+++ + + + + W A++ G
Sbjct: 246 NAILAGALVDMYVKCRRLPVAMQVFERLERK-NVIQWTAVVVG 287
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 1 MIKTNLSAYGNSV--GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M + S N++ G ++ +Y + A ++FE L + V + ++++ ++++
Sbjct: 236 MTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVT 295
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L L+ + + RPDS + + ++ G ++ ++ G DV G+S++
Sbjct: 296 EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIV 355
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y+KCG +EA F +M+ ++V W++M+NGL +G REAV ++ M+ G++ DEV
Sbjct: 356 DMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEV 415
Query: 179 VMMGLIQACADLG---DSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASH 233
+ L+ AC+ G + R S IRR + K + +VD+ + G L A
Sbjct: 416 TYLALLSACSHAGLVDECRRYFSC----IRRDRTVRPKAEHYACMVDLLGRAGELREARD 471
Query: 234 VFKNMS-RINIVTWGALIS 251
+ + M + W L+S
Sbjct: 472 LIRTMPMEPTVGVWQTLLS 490
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 274/523 (52%), Gaps = 4/523 (0%)
Query: 37 PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM-G 95
P V +Y + I ++ P + L + M++ +RP+ TF A KA S G
Sbjct: 80 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139
Query: 96 EEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVF 154
++ A+ GY +D FV + L++Y K G + A F++M +++V W++++ V
Sbjct: 140 TQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVL 199
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
+G+P E V+AY ++ G + V + ACA + + G +G+ + DV V
Sbjct: 200 DGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSV 259
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF 274
S+VD Y K + A VF M N V+W +++ +AQNG + + + G
Sbjct: 260 SNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGE 319
Query: 275 EPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARA 333
EP + S L CA + L LG+++H VR D N+ + ++++DMY KCG A
Sbjct: 320 EPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQ 379
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSG 392
+F +M R+L++WN +I Y G ALS+F +MI P++ T ++L+A S G
Sbjct: 380 VFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGG 439
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
L +EG F M ++ I+P +HYAC+VDLL RAG E A KI+ M P ++VW AL
Sbjct: 440 LTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGAL 499
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L GC H K +G A+K+ +L+P D G H L+SN A +W E VRK M+ G+K
Sbjct: 500 LGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIK 559
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
K PG S + +H F +D +H+ +I +L KL +M+A
Sbjct: 560 KDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQA 602
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 166/337 (49%), Gaps = 6/337 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+E+P R V +N+++ P E + Y + P+ + AC
Sbjct: 175 ARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAG 234
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ +L +GE+ + + G+G DV V +S+++ Y KC + +A F+ M ++ V W SM
Sbjct: 235 MTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSM 294
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
+ NG EA Y ++ G + + ++ ++ CA L G ++H ++R +
Sbjct: 295 VVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCI 354
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+ ++ V ++LVDMY K G ++ A VF M + N+VTW A+I G+A G A + L + +
Sbjct: 355 DSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDK 414
Query: 269 MQSCGFE--PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSK 324
M G E P+ ++LV+ L AC++ G K G + RF + V+D+ +
Sbjct: 415 MIM-GQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCR 473
Query: 325 CGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
G+ A + M R IS W ++ +HG E
Sbjct: 474 AGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTE 510
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 182/385 (47%), Gaps = 6/385 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D+ A++A ++ ++G +A+ L F+ + ++NLY K A +
Sbjct: 16 DAQLLAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAAS 75
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ-ACADLGD 192
+V +++ I+G + +P +A+ A+ M + G+ ++ + A +
Sbjct: 76 LAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPR 135
Query: 193 SRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
S G +H ++R +L D V + +DMY KTG L LA +F M N+V W A+++
Sbjct: 136 SAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMT 195
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
+G T+E ++ G P+ VS+ + ACA + L LG+ +G+ + F
Sbjct: 196 NAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGK 255
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + SV+D Y KC ARA+FD M R+ +SW ++ +Y +G EEA ++L
Sbjct: 256 DVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGAR 315
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+P +S+L+ + ++ GR + V + I + +VD+ + G +
Sbjct: 316 RAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAV-RSCIDSNIFVASALVDMYGKCGGI 374
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
E+A ++ M + L W A++ G
Sbjct: 375 EDAEQVFFEMP-QRNLVTWNAMIGG 398
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 124/250 (49%), Gaps = 13/250 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ YG + AR +F+ + +R ++ S+++AY++ + E +Y + P
Sbjct: 263 VVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPT 322
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L C L+ L +G + AV +++FV S+++++Y KCG + +A F
Sbjct: 323 DFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFF 382
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSR 194
+M +++LV W++MI G G A+ + +M + + + ++ ++ AC SR
Sbjct: 383 EMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTAC-----SR 437
Query: 195 FGLSVHGY----SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
GL+ GY +++ ++ +++ +VD+ + G + A + + M R +I WG
Sbjct: 438 GGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWG 497
Query: 248 ALISGFAQNG 257
AL+ G +G
Sbjct: 498 ALLGGCKMHG 507
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 287/536 (53%), Gaps = 1/536 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK +SA G ++ LY D+ +A K F + +N +++AY + ++ +
Sbjct: 389 IKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSF 448
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ QM E + P+ T+ L+ C SL L +GE+I ++ G+ +V+V S ++++Y
Sbjct: 449 EIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMY 508
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G++ A+ ++ D+V W++MI G V + EA+ ++ M+ GI D +
Sbjct: 509 AKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFA 568
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
I ACA + R G +H S D+ + +L+ +YA+ G + A F+ +
Sbjct: 569 SAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N ++W +L+SG AQ+G L++ + M E + + SA+ A A + +K G+ IH
Sbjct: 629 NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIH 688
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ +D + S+I +Y+K G S A F+ M R++ISWN +I Y HG G
Sbjct: 689 SMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGM 748
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL LF +M + P+H TF +LSA SH GLV+EG +F+ M + + P +HY C+
Sbjct: 749 EALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCV 808
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL RAG+++ A++ + M +W LLS C HK IGE+ A +L+L P+D
Sbjct: 809 VDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDS 868
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ L+SN +A+ ++W RK M+ G+KK PG S +EV +HAF DK H
Sbjct: 869 ATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLH 924
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 223/447 (49%), Gaps = 6/447 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y D A K+F+E R V ++N +I + ++S F+V L+ +M+ E + P+ TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 80 TVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
LKACV + +++ + G+ + V + +++LY K G + A F +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
KD+V W +MI+GL NG EA+ + M I V+ ++ A + G
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I+ + + V LV +Y+++ L A +F M+ + V++ +LISG Q G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ LEL +MQ +PD +++ S L ACA +G L G +H + ++ +++L S
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKP 376
++D+YSKC A F ++ +++ WNV++ +YG + ++ +F QM +E M+ P
Sbjct: 403 LLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-P 461
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ T+ S+L + G + G V K Q + ++D+ A+ G++ AL+I
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQ-IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFS 463
+ + E + W A+++G H FS
Sbjct: 521 LRRL-PEDDVVSWTAMIAGYVQHDMFS 546
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 232/471 (49%), Gaps = 25/471 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I SA+K+F + ++ + T+ ++I S+ E + L+ M ++ P
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L A + ++GE++ ++ G+ ++ +V + ++ LY + K+ A F
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V ++S+I+GLV G A++ + +M+++ + D + + L+ ACA +G
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H ++I+ ++ D+ ++ SL+D+Y+K ++ A F NIV W ++ + Q
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQ 440
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ E+ +MQ G P+ + S L C +G L LG+ IH + ++ F N+ +
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G + A + ++ D++SW +IA Y H EAL LF +M +
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-----------CMVDL 423
+ D+ FAS +SA + + +G+ Q + YA ++ L
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQ------------QIHAQSYAAGFGADLSINNALISL 608
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
AR G ++EA + + + ++ W +L+SG F +V ++L+
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLR 658
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 205/399 (51%), Gaps = 21/399 (5%)
Query: 1 MIKT--NLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKT L+ Y SV +I +Y + A ++ LP V ++ ++I Y + +
Sbjct: 489 VIKTGFQLNVYVCSV--LIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L L+ +M ++ D+ F A+ AC + L+ G++I ++ G+G D+ + ++++
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+LY +CG++ EA +AFEK+ K+ + W+S+++GL +G EA+ + RM + + +
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMF 666
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
I A A L + + G +H ++ + + +V SL+ +YAK+G + A F +M
Sbjct: 667 TYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDM 726
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
S N+++W A+I+G++Q+G L L EM+ CG P+ V+ V L AC+ IG +K G
Sbjct: 727 SERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGL 786
Query: 299 SIHGYTVRRFDFNLVLGTS-----VIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIAS 352
Y F + ++ S V+D+ + G A +M D + W ++++
Sbjct: 787 D---YFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843
Query: 353 YGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
IH + GE A L++ +P+ S L+S +
Sbjct: 844 CVIHKNIEIGERAAHHLLEL-----EPEDSATYVLISNI 877
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 182/394 (46%), Gaps = 6/394 (1%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L N M + VR + + L+ C++ L + + + G+ + + S+++ Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ G + A+ F++ + + W+ MI+ V + ++RM EGI + G
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 183 LIQACADLGDSRFGL--SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++AC GD F VH + + V L+D+Y+K G+++ A VF +
Sbjct: 165 VLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IVTW A+ISG +QNGL + L +M + P L S L A +I +LG+ +
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ F + ++ +YS+ A +F M SRD +S+N +I+ G
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ AL LF +M +KPD T ASLLSA + G + +G + K +
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI-KAGMSADIILEGS 402
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
++DL ++ +VE A K TE + +W +L
Sbjct: 403 LLDLYSKCADVETAHKFFLXTETE-NIVLWNVML 435
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 287/536 (53%), Gaps = 1/536 (0%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK +SA G ++ LY D+ +A K F + +N +++AY + ++ +
Sbjct: 389 IKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSF 448
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
++ QM E + P+ T+ L+ C SL L +GE+I ++ G+ +V+V S ++++Y
Sbjct: 449 EIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMY 508
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
K G++ A+ ++ D+V W++MI G V + EA+ ++ M+ GI D +
Sbjct: 509 AKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFA 568
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
I ACA + R G +H S D+ + +L+ +YA+ G + A F+ +
Sbjct: 569 SAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
N ++W +L+SG AQ+G L++ + M E + + SA+ A A + +K G+ IH
Sbjct: 629 NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIH 688
Query: 302 GYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ +D + S+I +Y+K G S A F+ M R++ISWN +I Y HG G
Sbjct: 689 SMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGM 748
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL LF +M + P+H TF +LSA SH GLV+EG +F+ M + + P +HY C+
Sbjct: 749 EALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCV 808
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL 480
VDLL RAG+++ A++ + M +W LLS C HK IGE+ A +L+L P+D
Sbjct: 809 VDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDS 868
Query: 481 GIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
+ L+SN +A+ ++W RK M+ G+KK PG S +EV +HAF DK H
Sbjct: 869 ATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLH 924
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 223/447 (49%), Gaps = 6/447 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y D A K+F+E R V ++N +I + ++S F+V L+ +M+ E + P+ TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 80 TVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
LKACV + +++ + G+ + V + +++LY K G + A F +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
KD+V W +MI+GL NG EA+ + M I V+ ++ A + G
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I+ + + V LV +Y+++ L A +F M+ + V++ +LISG Q G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
+ LEL +MQ +PD +++ S L ACA +G L G +H + ++ +++L S
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKP 376
++D+YSKC A F ++ +++ WNV++ +YG + ++ +F QM +E M+ P
Sbjct: 403 LLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-P 461
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
+ T+ S+L + G + G V K Q + ++D+ A+ G++ AL+I
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQ-IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFS 463
+ + E + W A+++G H FS
Sbjct: 521 LRRL-PEDDVVSWTAMIAGYVQHDMFS 546
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 232/471 (49%), Gaps = 25/471 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY I SA+K+F + ++ + T+ ++I S+ E + L+ M ++ P
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L A + ++GE++ ++ G+ ++ +V + ++ LY + K+ A F
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +D V ++S+I+GLV G A++ + +M+++ + D + + L+ ACA +G
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +H ++I+ ++ D+ ++ SL+D+Y+K ++ A F NIV W ++ + Q
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQ 440
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ E+ +MQ G P+ + S L C +G L LG+ IH + ++ F N+ +
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G + A + ++ D++SW +IA Y H EAL LF +M +
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-----------CMVDL 423
+ D+ FAS +SA + + +G+ Q + YA ++ L
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQ------------QIHAQSYAAGFGADLSINNALISL 608
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
AR G ++EA + + + ++ W +L+SG F +V ++L+
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLR 658
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 205/399 (51%), Gaps = 21/399 (5%)
Query: 1 MIKT--NLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKT L+ Y SV +I +Y + A ++ LP V ++ ++I Y + +
Sbjct: 489 VIKTGFQLNVYVCSV--LIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L L+ +M ++ D+ F A+ AC + L+ G++I ++ G+G D+ + ++++
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+LY +CG++ EA +AFEK+ K+ + W+S+++GL +G EA+ + RM + + +
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMF 666
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
I A A L + + G +H ++ + + +V SL+ +YAK+G + A F +M
Sbjct: 667 TYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDM 726
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
S N+++W A+I+G++Q+G L L EM+ CG P+ V+ V L AC+ IG +K G
Sbjct: 727 SERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGL 786
Query: 299 SIHGYTVRRFDFNLVLGTS-----VIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIAS 352
Y F + ++ S V+D+ + G A +M D + W ++++
Sbjct: 787 D---YFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843
Query: 353 YGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
IH + GE A L++ +P+ S L+S +
Sbjct: 844 CVIHKNIEIGERAAHHLLEL-----EPEDSATYVLISNI 877
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 183/394 (46%), Gaps = 6/394 (1%)
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L N M + VR + + L+ C++ L + + + G+ + + S+++ Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
+ G + A+ F++ + + W+ MI+ V + ++RM EGI + G
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 183 LIQACADLGDSRFGL--SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+++AC GD F VH + + V L+D+Y+K G+++ A VF +
Sbjct: 165 VLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+IVTW A+ISG +QNGL + L +M + P L S L A +I +LG+ +
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283
Query: 301 HGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H ++ F + ++ +YS+ A +F M SRD +S+N +I+ G
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
+ AL LF +M +KPD T ASLLSA + G + +G + K +
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI-KAGMSADIILEGS 402
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
++DL ++ +VE A K + TE + +W +L
Sbjct: 403 LLDLYSKCADVETAHKFFLTTETE-NIVLWNVML 435
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 275/510 (53%), Gaps = 7/510 (1%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R V YN++I + SP + + +Y +M + + PD TF LK M++ +++
Sbjct: 123 RDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGS-DAMEVSDVKKV 181
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQ 157
A +LG+ +D +VGS+++ Y K + +A F+++ R D V W++++NG +
Sbjct: 182 HALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFR 241
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
+A+ + +M++EG+ + ++ + GD G S+HG +++ + + V +
Sbjct: 242 FEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNA 301
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+D+Y K+ L+ A+ +F+ M ++ TW +++ G TL L M G PD
Sbjct: 302 LIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPD 361
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTV-----RRFDFNLVLGTSVIDMYSKCGVPSCAR 332
V+L + L C ++ LK G+ IHGY + R N + S++DMY KCG AR
Sbjct: 362 IVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDAR 421
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+FD M+ +D SWN++I YG+ GE AL +F M VKPD TF LL A SHSG
Sbjct: 422 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 481
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
V EGR + M + Y I PT HYAC++D+L RA ++EEA + SM VW ++
Sbjct: 482 FVNEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSI 541
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
LS C H + K++ +L P+ G++ L+SN + +K+EEV VR TM++ +K
Sbjct: 542 LSSCRLHGNKDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVK 601
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
K PG S + + +H F D++H ++E I
Sbjct: 602 KTPGCSWIGLQNGVHTFFTGDQTHPEFESI 631
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 191/385 (49%), Gaps = 9/385 (2%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG-SSMLNLYVKCGKMNEAMVAFE 135
+T L+ C D G++I V G+ +D +S++N+Y KCG M A++ F
Sbjct: 60 ATSIATLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFG 119
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+R D+ ++++I+G V NG P +A+D Y+ M+ +GI D+ L++ +D +
Sbjct: 120 GSER-DVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKG-SDAMEVSD 177
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGFA 254
VH + + D V ++LV Y+K ++ A VF + R + V W AL++G++
Sbjct: 178 VKKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 237
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
L + +M+ G ++ S L + G L G+SIHG V+ FD +V
Sbjct: 238 HIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIV 297
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ ++ID+Y K A ++F+ M RDL +WN ++ + G + L+LF M+ +
Sbjct: 298 VSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSG 357
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH---YACMVDLLARAGEV 430
++PD T ++L +++GR M++ + + + ++D+ + G++
Sbjct: 358 IRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDL 417
Query: 431 EEALKIVDSMSTEPGLAVWVALLSG 455
+A + DSM + A W +++G
Sbjct: 418 RDARMVFDSMRVKDS-ASWNIMING 441
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LYG + A +FE + R + T+NS++ + L L+ M+ +RPD
Sbjct: 302 LIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPD 361
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN----DVFVGSSMLNLYVKCGKMNEAM 131
T T L C L LK G EI + G N + F+ +S++++YVKCG + +A
Sbjct: 362 IVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDAR 421
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F+ M+ KD W+ MING A+D + M + G+ DE+ +GL+QAC+ G
Sbjct: 422 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 481
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 291/552 (52%), Gaps = 11/552 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K NL ++IA + + A +F ++ V YN++I A+ R P
Sbjct: 40 VLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLA 99
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ +M V D+ T+ LKAC + +++ E I + ++G+ D+FV +S+++
Sbjct: 100 FSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDS 159
Query: 121 YVKCG--KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y KCG + A FE M +D V W+SMI GLV G+ EA + M + +
Sbjct: 160 YFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNT 219
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ G ++A G+ + R +V +++V Y+K G +D+A +F M
Sbjct: 220 ILDGYVKA----GEMNAAFELFEKMPAR----NVVSWSTMVLGYSKAGDMDMARILFDKM 271
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+V W +ISG+A+ GLA + L +M+ G + D +++S L ACA G L LGK
Sbjct: 272 PVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGK 331
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H R RF + + ++IDMY+KCG A ++F M +D++SWN II +HG
Sbjct: 332 RVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHG 391
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
HGE+AL LF +M PD TF +L A +H+G V+EG ++F M Y + P +HY
Sbjct: 392 HGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHY 451
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
CMVDLL R G ++EA ++V SM EP +W LL C H + E+V +++K
Sbjct: 452 GCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSEL 511
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
D G +++SN +A W+ A +R M+ + ++K G S +EV+ E+H F + D+SH
Sbjct: 512 SDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHP 571
Query: 538 QYEDIVYVLKKL 549
+ + I + L
Sbjct: 572 KSDRIYKTIDGL 583
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 182/380 (47%), Gaps = 16/380 (4%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L C SL +K +I + ++ + FVG ++ + C +M A+ F ++Q D+
Sbjct: 24 LHRCSSLNQVK---QIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ ++++I V N +P A + M+ G+ AD L++AC+ R +H
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLD---LASHVFKNMSRINIVTWGALISGFAQNGLA 259
+ LD+ V SL+D Y K G LD A VF+ M+ + V+W ++I G + G
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKCG-LDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGEL 199
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVI 319
G L EM E D+VS + L + G + + R N+V ++++
Sbjct: 200 GEARRLFDEMP----ERDTVSWNTILDGYVKAGEMNAAFELFEKMPAR---NVVSWSTMV 252
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
YSK G AR LFD+M ++L+ W ++I+ Y G ++A++L+ QM E +K D
Sbjct: 253 LGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDG 312
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T S+LSA + SGL+ G+ + + + + + ++D+ A+ G +E AL I
Sbjct: 313 TVISILSACAVSGLLGLGKR-VHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHG 371
Query: 440 MSTEPGLAVWVALLSGCHNH 459
M + W A++ G H
Sbjct: 372 M-VRKDVVSWNAIIQGLAMH 390
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 254/443 (57%), Gaps = 4/443 (0%)
Query: 115 SSMLNLY-VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
S +L LY + G ++ A++ F +++ W+++I G + + P A YK M +
Sbjct: 42 SKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSR 101
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D + +++ACA + + +H + +R+ D + T+L+D+YAK G +D A
Sbjct: 102 KVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEK 161
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF M + +I +W ALISGFAQ L L M+ GF+P+ +S++ AL ACAQ+G
Sbjct: 162 VFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGD 221
Query: 294 LKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIA 351
K G+ IHGY V RFD N + VIDMY+KCG A +F+ M R D+++WN +I
Sbjct: 222 FKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIM 281
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
++ +HG G +AL LF +M ++ V PD ++ ++L A +H GLVEEG F+ M ++
Sbjct: 282 AFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVK 340
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
P KHY +VDLL RAG + EA IV+SM T P + +W LL H+ I E V++K
Sbjct: 341 PNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRK 400
Query: 472 VLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIM 531
++++ + G L+SN +A ++W +V VR+ M+ +KKVPG S +E NG +H F
Sbjct: 401 LVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYN 460
Query: 532 EDKSHNQYEDIVYVLKKLYLEMR 554
DKSH + +I L ++ ++
Sbjct: 461 ADKSHESWREIYAKLDEIRFRVK 483
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 183/345 (53%), Gaps = 9/345 (2%)
Query: 33 FEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDL 92
F ++ + +N+II + + +P Y MI + + D+ T + LKAC ++
Sbjct: 62 FSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLAR 121
Query: 93 KMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
+I V G+ D +G+++L++Y K G+++ A F++M ++D+ W+++I+G
Sbjct: 122 LESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGF 181
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDV 212
+P EA+ +KRM+ +G +E+ ++G + ACA LGD + G +HGY +++
Sbjct: 182 AQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNA 241
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+V ++DMYAK G +D A VF++MS R +IVTW +I FA +G LEL +M
Sbjct: 242 QVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQ 301
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLG----KSIHGYTVRRFDFNLVLGTSVIDMYSKCGV 327
G PD VS ++ L AC G ++ G S+ V+ N+ SV+D+ + G
Sbjct: 302 SGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKP---NVKHYGSVVDLLGRAGR 358
Query: 328 PSCARALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
A + + M + D++ W ++ + H + E A ++ +++E
Sbjct: 359 LHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVE 403
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 126/237 (53%), Gaps = 2/237 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I SA K+F+E+ R + ++N++I +++ P E L L+ +M + +P+
Sbjct: 146 LLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPN 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ AL AC L D K GE+I + + V + ++++Y KCG +++A + FE
Sbjct: 206 EISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFE 265
Query: 136 KMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
M RKD+V W++MI +G+ +A++ +++M + G+ D+V + ++ AC G
Sbjct: 266 SMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVE 325
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALI 250
G + + +VK S+VD+ + G L A + +M + +IV W L+
Sbjct: 326 EGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLL 382
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 294/562 (52%), Gaps = 32/562 (5%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y +++ A F ++P R ++N+II A+S + LG + +M + +P+S T+
Sbjct: 69 YSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTY 128
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
L AC ++ D + G+ + + V + DV VG+ ++++Y KCG ++ + F ++
Sbjct: 129 ASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLRE 188
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++V W+S+I+G+ G E D + +M+K+ + D ++ ++ C + G +
Sbjct: 189 HNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQL 248
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-------------------- 239
HG++++ +N V V + + MYAK G + AS F+ M+
Sbjct: 249 HGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNV 308
Query: 240 -----------RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
N+++W A++ + QN L+L + M PD ++ V+ + AC
Sbjct: 309 ERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGAC 368
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+++ KLG I V+ ++ + S I +YS+CG A+ LFD +Q ++LISWN
Sbjct: 369 SELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWN 428
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
I+ Y +G G + + +F M+ KPDH T+ ++LS SHSGLV+E +Y F+ M
Sbjct: 429 SIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKD 488
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEK 467
+ I T +H+ CMVDL RAG ++ AL ++D M +P ++W ALLS C H + E
Sbjct: 489 FGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAEL 548
Query: 468 VAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELH 527
K +L+LN ++ + L++N ++ + E V+ VR+ M++ ++K PG S +EV +H
Sbjct: 549 AMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRVH 608
Query: 528 AFIMEDKSHNQYEDIVYVLKKL 549
F D SH Q +DI L+ +
Sbjct: 609 VFTANDTSHPQVKDIYKALEDI 630
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 199/434 (45%), Gaps = 65/434 (14%)
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG------------------- 125
AC S+ +++ ++ + + G+GN+ + +S++++Y+KC
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 126 ------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
+M A+ F +M +D V W+++I+ +G +++ + M +G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
+ + ++ ACA++ D ++G +H +R LDV V LVDMYAK G +D +
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF + N+VTW +LISG A G ++ +M+ D+ L + L C
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG-----------------------VPS 329
+ +G+ +HG+TV+ + ++ +G + + MY+KCG + S
Sbjct: 242 ISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITS 301
Query: 330 C--------ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
AR F++M R++ISWN ++ +Y + EE L L++ M+ V+PD TF
Sbjct: 302 FSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITF 361
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+++ A S + + G V K + + L +R G +EEA + DS+
Sbjct: 362 VTMIGACSELAISKLGTQILSQAV-KVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQ 420
Query: 442 TEPGLAVWVALLSG 455
E L W +++ G
Sbjct: 421 -EKNLISWNSIMGG 433
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 193/414 (46%), Gaps = 35/414 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y I +++++F L V T+ S+I + S EV ++ QM K+ V D
Sbjct: 166 LVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMD 225
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L C ++ +GE++ V+ G + V VG++ L++Y KCG +A +AFE
Sbjct: 226 NFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFE 285
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-------------------------- 169
M D++ W++MI +G A D + RM
Sbjct: 286 TMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKL 345
Query: 170 -----KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
++ + D + + +I AC++L S+ G + +++ L DV V S + +Y++
Sbjct: 346 YILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSR 405
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSA 284
G ++ A ++F ++ N+++W +++ G+AQNG +E+ M G +PD ++ ++
Sbjct: 406 CGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAI 465
Query: 285 LLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRD 342
L C+ G +K K + F ++ L ++D++ + G+ A + DQM +
Sbjct: 466 LSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKP 525
Query: 343 LIS-WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
S W ++++ IH H E L ++ + + + ++ L + S G +E
Sbjct: 526 NASIWGALLSACRIH-HDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLE 578
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 38/204 (18%)
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGV-------------PS-- 329
+AC+ +G++++ +HG + + F N V+ S+IDMY KC PS
Sbjct: 1 MACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLF 60
Query: 330 ---C-----------ARAL--FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
C RA+ F QM RD +SWN II+++ HG ++L F++M
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA--CMVDLLARAGEVE 431
+P+ T+AS+LSA ++ + G++ L +++P +VD+ A+ G ++
Sbjct: 121 CQPNSMTYASVLSACANIYDFQWGKH---LHARIVRVEPFLDVLVGNGLVDMYAKCGLID 177
Query: 432 EALKIVDSMSTEPGLAVWVALLSG 455
+ ++ +++ E + W +L+SG
Sbjct: 178 ASKRVFNTLR-EHNVVTWTSLISG 200
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L + + V I LY I A+ LF+ + + + ++NSI+ Y++ +V+
Sbjct: 385 VKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVI 444
Query: 62 GLYNQMIKEDVRPDSSTFTVALKAC 86
++ M+ +PD T+ L C
Sbjct: 445 EIFQNMLMAGCKPDHITYIAILSGC 469
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 283/508 (55%), Gaps = 16/508 (3%)
Query: 60 VLGLYNQMIKEDVRPDSS--TFTVALKACVSLMDLKMGEEIWRKA----VELGYGNDVFV 113
VL + ++ + P S +F + K CVSL+ E ++++ ++LG D F
Sbjct: 6 VLHQTHVLVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFC 65
Query: 114 GSSMLNLYVKC-----GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
S NL C G M+ A F +M +++M+ G V + EA+ YK M
Sbjct: 66 AS---NLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEM 122
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G+ D L++ACA L G+ VH + ++ L DV VQ SL+ MY K G +
Sbjct: 123 AERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEI 182
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLA 287
+ VF+ M+ ++ +W ALI+ A G+ L LL +M + G+ + LVS L A
Sbjct: 183 GVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSA 242
Query: 288 CAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
C +G L LG+S+HG+ +R N+++ TS+I+MY KCG LF +M ++ +S+
Sbjct: 243 CTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSY 302
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
+V+I+ +HG+G E L +F +M+E ++PD + +L+A SH+GLV+EG F+ M
Sbjct: 303 SVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKL 362
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGE 466
++ I+PT +HY CMVDL+ RAG+++EAL+++ SM EP +W +LLS H GE
Sbjct: 363 EHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGE 422
Query: 467 KVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGEL 526
AK++ KL+ + ++SN +A Q+WE+VA R M G+ + PG+S+VEV ++
Sbjct: 423 IAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKM 482
Query: 527 HAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
H F+ +D H Q E + +L ++ +++
Sbjct: 483 HRFVSQDAGHPQSESVYEMLYQMEWQLK 510
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 145/270 (53%), Gaps = 1/270 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F ++ G +N+++ + + + E L Y +M + V+PD+ T+ LKAC
Sbjct: 84 ACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACAR 143
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L ++ G ++ ++LG NDVFV +S++++Y KCG++ FE+M + + WS++
Sbjct: 144 LPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSAL 203
Query: 149 INGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
I G + + M EG A+E +++ ++ AC LG G SVHG+ +R
Sbjct: 204 ITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNV 263
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+V V+TSL++MY K G L +F+ M++ N +++ +ISG A +G L +
Sbjct: 264 SGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFT 323
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
EM G EPD + V L AC+ G ++ G
Sbjct: 324 EMLEQGLEPDDIVYVGVLNACSHAGLVQEG 353
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 124/240 (51%), Gaps = 3/240 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-RP 74
+I++YG +I +FE++ R V +++++I A++ + L L M E R
Sbjct: 172 LISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRA 231
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ S L AC L L +G + + G +V V +S++ +Y+KCG + + M F
Sbjct: 232 EESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLF 291
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+KM +K+ + +S MI+GL +G RE + + M ++G++ D++V +G++ AC+ G +
Sbjct: 292 QKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQ 351
Query: 195 FGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
GL H + ++ +VD+ + G +D A + K+M N V W +L+S
Sbjct: 352 EGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSA 411
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 291/573 (50%), Gaps = 36/573 (6%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V R++ Y N +V A+ + E +N +I AY R E L +Y M+ + +
Sbjct: 119 VSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKI 178
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T+ LKAC +D G E+ R +FV ++++++Y + GK+ A
Sbjct: 179 EPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARH 238
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA----------------- 175
F+ M R+D V W+++I+ G +EA + M++EG++
Sbjct: 239 LFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGN 298
Query: 176 -----------------DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
D + M+ + AC+ +G + G +HG+++R ++ V+ +L
Sbjct: 299 FRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNAL 358
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+ MY++ L A +F ++TW A++SG+A L EM G EP+
Sbjct: 359 ITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNY 418
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCGVPSCARALFD 336
V++ S L CA+I L+ GK H Y ++ +F+ L+L +++DMYS+ G AR +FD
Sbjct: 419 VTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFD 478
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+ RD +++ +I YG+ G GE L LF +M + +KPDH T ++L+A SHSGLV +
Sbjct: 479 SLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQ 538
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
G+ F M+ + I P +HYACM DL RAG + +A + + M +P A+W LL C
Sbjct: 539 GQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGAC 598
Query: 457 HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPG 516
H +GE A K+L++ PD G + L++N +A W ++A VR MR G++K PG
Sbjct: 599 RIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPG 658
Query: 517 YSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ V+V E F++ D S+ +I ++ L
Sbjct: 659 CAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGL 691
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 187/394 (47%), Gaps = 35/394 (8%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L AC L G+++ + + LG + + S ++N Y + +A E D
Sbjct: 88 LLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDP 147
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
+ W+ +I+ V NG EA+ YK M + I+ DE +++AC + D GL VH
Sbjct: 148 LHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRS 207
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ + V +LV MY + G L++A H+F NM R + V+W +IS +A G+
Sbjct: 208 IEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEA 267
Query: 263 LELLMEMQSCGFEP----------------------------------DSVSLVSALLAC 288
+L MQ G E D++++V L AC
Sbjct: 268 FQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNAC 327
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ IG +KLGK IHG+ VR FD + ++I MYS+C A LF + + + LI+WN
Sbjct: 328 SHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWN 387
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+++ Y EE LF +M++ ++P++ T AS+L + ++ G+ + ++
Sbjct: 388 AMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKH 447
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+ + + +VD+ +R+G V EA K+ DS++
Sbjct: 448 KQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLT 481
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 1/211 (0%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ AC G +H I L+ + + + LV+ Y L A V ++ + ++
Sbjct: 87 LLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLD 146
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH- 301
+ W LIS + +NG L + M + EPD + S L AC + G +H
Sbjct: 147 PLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHR 206
Query: 302 GYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
+++L + +++ MY + G AR LFD M RD +SWN II+ Y G +E
Sbjct: 207 SIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKE 266
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
A LF M E V+ + + ++ HSG
Sbjct: 267 AFQLFGSMQEEGVEMNVIIWNTIAGGCLHSG 297
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 283 SALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR 341
S LLAC L GK +H + D N +L + +++ Y+ + A+ + + +
Sbjct: 86 SLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTL 145
Query: 342 DLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWF 401
D + WN++I++Y +G EAL ++ M+ ++PD T+ S+L A S G
Sbjct: 146 DPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSG---- 201
Query: 402 DLMVSKYKIQPTEKHYA-----CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
L V + I+ + ++ +V + R G++E A + D+M ++ W ++S
Sbjct: 202 -LEVHR-SIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVS-WNTIIS 256
>gi|125533803|gb|EAY80351.1| hypothetical protein OsI_35522 [Oryza sativa Indica Group]
Length = 470
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 266/465 (57%), Gaps = 18/465 (3%)
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P + + L+ C ++ GE+ +AV G+ D + + ++ +Y +CG+ A
Sbjct: 4 PVAGRLSGLLRRCAVAGAVRPGEQAHARAVVGGWLPDATLETDLVLMYCRCGERRRARRV 63
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M+ + + N L+ PR+A++ + R+ G+ D + +++AC++L D+
Sbjct: 64 FDGMRAPSMHAY----NVLLAASPPRDAMEVFSRLLASGLRPDGYSVPAVVRACSELPDA 119
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG+++R L +V V +L+DMYAK G LD A VF M+ + V W +++G+
Sbjct: 120 VLGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTERDAVVWNCMVAGY 179
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA-------CAQIGFLKLGKSIHGYTVR 306
A+ G A T E+ Q ++V++V+ L A CA+ G L G+ IHG VR
Sbjct: 180 ARAGRAVETFEIFSRAQV-----EAVNMVNGLQAVPSVLNICAKEGELMKGREIHGRMVR 234
Query: 307 --RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
FD ++ +G ++I+MY+KCG + ++A+F MQ RD++SW+ +I SY IHG GE+AL
Sbjct: 235 CLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALK 294
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
++++M+ VKP+ TF S+LS+ SHSGLV EGR F+ M + + P +HYACMVDLL
Sbjct: 295 VYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLL 354
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHA 484
RAG +EEA+ ++ M EP +VW ALLS C H +GE A ++ +L +
Sbjct: 355 GRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYV 414
Query: 485 LVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+ + + + VAG+R MR+ GM K PG S ++V G HAF
Sbjct: 415 TLCGIYDAVGQSDGVAGLRSRMRELGMVKTPGCSRIDVKGRAHAF 459
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 30/357 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + AR++F+ + + YN ++ A P + + ++++++ +RPD
Sbjct: 47 LVLMYCRCGERRRARRVFDGMRAPSMHAYNVLLAA----SPPRDAMEVFSRLLASGLRPD 102
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ ++AC L D +G I AV LG +V V +++L++Y K G +++A+ F+
Sbjct: 103 GYSVPAVVRACSELPDAVLGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFD 162
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA-------CA 188
+M +D V W+ M+ G G+ E + + R + E ++ M+ +QA CA
Sbjct: 163 EMTERDAVVWNCMVAGYARAGRAVETFEIFSRAQVEAVN-----MVNGLQAVPSVLNICA 217
Query: 189 DLGDSRFGLSVHGYSIR-RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
G+ G +HG +R + D+ V +L++MYAK G ++++ VF M + ++V+W
Sbjct: 218 KEGELMKGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWS 277
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI------- 300
+I ++ +G L++ MEM S G +P+ ++ S L +C+ G + G+ I
Sbjct: 278 TMIHSYSIHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKV 337
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
HG + ++D+ + G A L +M S W ++++ +H
Sbjct: 338 HGVHPAAEHY-----ACMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMH 389
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 8 AYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM 67
A GN+ +I +Y + ++ +F + R V +++++I +YS + L +Y +M
Sbjct: 243 AVGNA---LINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEM 299
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGK 126
+ E V+P+ TFT L +C + G +I+ ++ G + M++L + G
Sbjct: 300 LSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGA 359
Query: 127 MNEAMVAFEKMQRKDLV-CWSSMINGLVF-NGQPREAVDAYKRMK-KEGIDADEVVMMGL 183
+ EA+ KM + W ++++ N + A++ + +EG ++ V + G+
Sbjct: 360 IEEAVGLIRKMPMEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGI 419
Query: 184 IQA 186
A
Sbjct: 420 YDA 422
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 298/547 (54%), Gaps = 26/547 (4%)
Query: 12 SVGRIIALYGGKN--DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
++G++I+ + D+ A+++F+++P YNS+I YS + P + + L+ +MI
Sbjct: 148 TLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMIC 207
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ P+ T LKAC + A++LG G+ VFV ++++ +YV CG ++
Sbjct: 208 SGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHC 267
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F+ + K LV W+SMI + G+ D +V L A
Sbjct: 268 ARKLFDDITDKTLVSWNSMI-------------------EITGVKIDIIVRNALXDMYAK 308
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
G+ ++ R +V TS++ YA+ G +++A +F M N+V+W ++
Sbjct: 309 CGNLHSAQAI----FDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSM 364
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRF 308
IS + + G L+L +M++ PD +LVS L AC+Q+G L +GK IH Y + +
Sbjct: 365 ISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKG 424
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + L S+IDMY+KCG A +F +M ++L+SWNVII + +HG G EA+ LF +
Sbjct: 425 AYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEE 484
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M PD T LLSA SHSGLV+ G Y+FD M Y++ +HYACMVDLL R G
Sbjct: 485 MQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLGRGG 544
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+ EA++++ M +P + VW ALL C H IG+++ K++L+L P G++ L+SN
Sbjct: 545 LLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISN 604
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+ Q+WE+V +RK M G+KK S +E++G ++ F+++DK H I +L +
Sbjct: 605 IYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQ 664
Query: 549 LYLEMRA 555
L +R+
Sbjct: 665 LTDHLRS 671
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 283/529 (53%), Gaps = 2/529 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ +AR++F+E+P R TYN++++ S++ S E L L+ M ++ + TF+ L
Sbjct: 191 LAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTV 250
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
+ DL +G ++ V ++VFV +S+L+ Y KC ++E F +M +D V +
Sbjct: 251 ATGVGDLCLGRQV-HGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSY 309
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+ MI G +N + ++ M+ D + L+ + G +H +
Sbjct: 310 NVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVL 369
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L+ + V +L+DMY+K G LD A F N + V+W A+I+G QNG L+L
Sbjct: 370 LGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQL 429
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL-GTSVIDMYSK 324
M+ G PD + S + A + + + LG+ +H Y +R + V G++++DMY+K
Sbjct: 430 FCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTK 489
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A FD+M R+ ISWN +I++Y +G + A+ +F M+ KPD TF S+
Sbjct: 490 CGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSV 549
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA SH+GL EE +F+LM +Y I P ++HY+C++D L R G ++ +++ M E
Sbjct: 550 LSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFED 609
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
+W ++L C H + A+K+ + D + ++SN FA KWE+ AGV+K
Sbjct: 610 DPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKK 669
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
MR G++K GYS VEV ++++F D+++ +I L++LY EM
Sbjct: 670 IMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEM 718
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 186/402 (46%), Gaps = 19/402 (4%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+M+K P + + L + +S L ++ ++ + N+ F + ML+ Y + G
Sbjct: 24 RMVKTGFDPATYRLNLLLHSLISSGRLAQARALFD---QMPHRNNAFSLNRMLSGYSRSG 80
Query: 126 KMNEAMVAF--EKMQRKDLVCWSSMINGLVFNGQPR--EAVDAYKRMKKEGIDADEVVMM 181
+++ A F +D V W+ MI R +AV ++ M +EG+ D V +
Sbjct: 81 QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140
Query: 182 GLIQACADLGDSRFGL---SVHGYSIRRHL-NLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ G + + S+H ++++ L + +V V +L+D Y K G L A VF+
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M + VT+ A++ G ++ G L+L M+ G + + L +G L LG
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260
Query: 298 KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+ +HG R N+ + S++D YSKC + LF +M RD +S+NV+IA Y +
Sbjct: 261 RQVHGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNR 320
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLS---ALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
L LF +M +ASLLS ++ H G+ ++ L+ + +
Sbjct: 321 CASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLL----GLSSED 376
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
++D+ ++ G ++ A + + + G++ W A+++GC
Sbjct: 377 LVGNALIDMYSKCGMLDAAKTNFINKNDKTGVS-WTAMITGC 417
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 294/536 (54%), Gaps = 3/536 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
G DI SAR +F+++ + + T+ +I YS+ + + L+ +++ + PD T T
Sbjct: 194 GGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTS 253
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
L ACV L +G+++ + G +DVFVG +++++Y K + + F M +
Sbjct: 254 LLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHN 313
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
++ W+++I+G V + Q +EA+ + M + + +++ACA L D G +HG
Sbjct: 314 VMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+I+ L+ V SL++MYA++G ++ A F + N++++ A+ +
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDE 433
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
+ +E G P + + + + AC IG + G+ IH V+ F NL + ++I
Sbjct: 434 SFNHEVEHTGVGASPFTYACLLSGAAC--IGTIVKGEQIHALIVKSGFGTNLCINNALIS 491
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MYSKCG A +F+ M R++I+W II+ + HG +AL LF +M+E VKP+ T
Sbjct: 492 MYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVT 551
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+ ++LSA SH GL++E F+ M + I P +HYACMVDLL R+G + EA++ ++SM
Sbjct: 552 YIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSM 611
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
+ VW L C H+ +GE AKK+L+ P D + L+SN +A E +W++VA
Sbjct: 612 PFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVA 671
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
+RK+M++ + K GYS +EV+ ++H F + D SH Q I L +L L+++ +
Sbjct: 672 ALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNL 727
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 219/456 (48%), Gaps = 14/456 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEEL--PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-- 68
+ +I LY D +A +F + R + ++++II ++ L + M+
Sbjct: 77 LNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQC 136
Query: 69 -KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCG- 125
+ + P+ FT L++C + + G I+ ++ GY + V VG ++++++ K G
Sbjct: 137 SRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGL 196
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
+ A + F+KMQ K+LV W+ MI G +AVD + R+ D+ + L+
Sbjct: 197 DIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLS 256
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
AC +L G +H + IR L DV V +LVDMYAK+ ++ + +F M N+++
Sbjct: 257 ACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMS 316
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ALISG+ Q+ ++L M P+ + S L ACA + +GK +HG T+
Sbjct: 317 WTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTI 376
Query: 306 R--RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
+ N V G S+I+MY++ G CAR F+ + ++LIS+N + +E+
Sbjct: 377 KLGLSTINCV-GNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESF 435
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+ ++ T V T+A LLS + G + +G L+V K ++ +
Sbjct: 436 N--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIV-KSGFGTNLCINNALISM 492
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
++ G E AL++ + M + W +++SG H
Sbjct: 493 YSKCGNKEAALQVFNDMGYR-NVITWTSIISGFAKH 527
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 169/319 (52%), Gaps = 10/319 (3%)
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM-- 137
++ LKAC+ +L++G+ + K ++ G D + +S++ LY KCG A+ F M
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRM---KKEGIDADEVVMMGLIQACADLGDSR 194
++DLV WS++I+ N A+ + M + I +E L+++C++
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 195 FGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDL--ASHVFKNMSRINIVTWGALIS 251
GL++ + ++ + + V V +L+DM+ K G LD+ A VF M N+VTW +I+
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGG-LDIQSARMVFDKMQHKNLVTWTLMIT 221
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
++Q GL ++L + + PD +L S L AC ++ F LGK +H + +R
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS 281
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +G +++DMY+K +R +F+ M +++SW +I+ Y +EA+ LF M+
Sbjct: 282 DVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNML 341
Query: 371 ETMVKPDHSTFASLLSALS 389
V P+ TF+S+L A +
Sbjct: 342 HGHVTPNCFTFSSVLKACA 360
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 149/280 (53%), Gaps = 4/280 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ++RK+F + V ++ ++I Y + E + L+ M+ V P+
Sbjct: 289 LVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPN 348
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ LKAC SL D +G+++ + ++LG VG+S++N+Y + G M A AF
Sbjct: 349 CFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFN 408
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-MKKEGIDADEVVMMGLIQACADLGDSR 194
+ K+L+ +++ + N + ++ +++ ++ G+ A L+ A +G
Sbjct: 409 ILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIV 465
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H ++ ++ + +L+ MY+K G+ + A VF +M N++TW ++ISGFA
Sbjct: 466 KGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFA 525
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
++G A LEL EM G +P+ V+ ++ L AC+ +G +
Sbjct: 526 KHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLI 565
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 8/193 (4%)
Query: 2 IKTNLSAYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
IK LS N VG +I +Y + ARK F L + + +YN+ A ++ E
Sbjct: 376 IKLGLSTI-NCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDES 434
Query: 61 LGLYNQMIKEDVRPDSSTFTVA--LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+N + E +S FT A L + + GE+I V+ G+G ++ + ++++
Sbjct: 435 ---FNHEV-EHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALI 490
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y KCG A+ F M ++++ W+S+I+G +G +A++ + M + G+ +EV
Sbjct: 491 SMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEV 550
Query: 179 VMMGLIQACADLG 191
+ ++ AC+ +G
Sbjct: 551 TYIAVLSACSHVG 563
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 287/524 (54%), Gaps = 4/524 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A+++FE + ++ + ++SII AY+R + LY +MI E V P+
Sbjct: 71 LLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPN 130
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF AL C S+ L G I ++ + D + S+LN+Y+KC +M EA FE
Sbjct: 131 VVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFE 190
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSR 194
M+ +++ +++MI+ V G+ EA++ + RM K E I+ + ++ A LG+
Sbjct: 191 GMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLE 250
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH + R + +V VQ +LV MY K G A VF +M+ N+++W ++I+ +A
Sbjct: 251 KGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYA 310
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
Q+G L L M EP VS SAL ACA +G L G+ IH V + +
Sbjct: 311 QHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQM 367
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
TS++ MY++CG AR +F++M++RD S N +IA++ HG ++AL ++ +M + +
Sbjct: 368 ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGI 427
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
D TF S+L A SH+ LV + R + +V + + P +HY CMVD+L R+G + +A
Sbjct: 428 PADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAE 487
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++V++M + W+ LLSGC H GE+ A+KV +L P + + +SN +A +
Sbjct: 488 ELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAK 547
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
++++ VRK M + G+ + S +E++ ELH F + Q
Sbjct: 548 RFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQ 591
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 210/403 (52%), Gaps = 7/403 (1%)
Query: 47 IIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
+I A R+ P + L L+ +M + + D T + AC L L+ G + + G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+ D+ + +++L +Y KCG +++A FE M+ KDL WSS+I G+ AV Y+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
RM EG++ + V + CA + G ++H + + D +Q SL++MY K
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDSVSLVSAL 285
+ A VF+ M N+ ++ A+IS + Q G LEL M EP++ + + L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 286 LACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
A +G L+ G+ +H + R FD N+V+ +++ MY KCG P AR +FD M +R++I
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SW +IA+Y HG+ +EAL+LF +M V+P +F+S L+A + G ++EGR +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA 447
V P + ++ + AR G +++A ++ + M T +
Sbjct: 358 VEANLASP--QMETSLLSMYARCGSLDDARRVFNRMKTRDAFS 398
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 288/556 (51%), Gaps = 41/556 (7%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIKTN + V + I+ + I A F + V +N++I +
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L Y M++ +V P S +F+ +KAC L+D GE + + G+ + VFV ++++
Sbjct: 61 LVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEF 120
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y G + + F+ M +D+ W++MI+ V +G A + M ++
Sbjct: 121 YSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEK--------- 171
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+V +++D Y K G+ + A +F M
Sbjct: 172 ------------------------------NVATWNAMIDGYGKLGNAESAEFLFNQMPA 201
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I++W +++ +++N + L ++ G PD V++ + + ACA +G L LGK +
Sbjct: 202 RDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEV 261
Query: 301 HGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H Y V + FD ++ +G+S+IDMY+KCG A +F ++Q+++L WN II HG+
Sbjct: 262 HLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYV 321
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EEAL +F +M ++P+ TF S+L+A +H+G +EEGR WF MV Y I P +HY C
Sbjct: 322 EEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGC 381
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
MVDLL++AG +E+AL+++ +M+ EP +W ALL+GC HK I + ++ L P +
Sbjct: 382 MVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSN 441
Query: 480 LGIHALVSNFFAMEQKWEEVAGVRKTMRKSGM-KKVPGYSVVEVNGELHAFIMEDKSHNQ 538
G ++L+ N +A E +W EVA +R TM+ G+ K+ PG S VE+N +H F D H
Sbjct: 442 SGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAASDTYHPS 501
Query: 539 YEDIVYVLKKLYLEMR 554
Y + +L +L ++R
Sbjct: 502 YSQLHLLLAELDDQLR 517
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 297/557 (53%), Gaps = 19/557 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ AR++FE +P R V + ++++ + + P + ++ +M+ P
Sbjct: 105 LVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPS 164
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC SL LK+G++ ++ D VGS++ +LY KCG++ +A+ AF
Sbjct: 165 IYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFS 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ K+++ W+S ++ NG P + + + M E I +E + + C ++
Sbjct: 225 RIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLEL 284
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G V I+ +++V+ SL+ +Y K+G + A F M +++VTW A+I+G AQ
Sbjct: 285 GTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQ 344
Query: 256 ------NGLAGS-----TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+ L+ L++ ++ G +PD +L S L C+++ ++ G+ IH T
Sbjct: 345 MMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQT 404
Query: 305 VRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ F ++++ TS+I MY+KCG A F +M +R +I+W +I + HG ++AL
Sbjct: 405 IKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQAL 464
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
+F M V+P+ TF +LSA SH+G+V + +F++M KYKI+P HY CMVD+
Sbjct: 465 HIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDM 524
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
R G +E+AL + M+ EP +W ++GC +H +G ++++L L P D +
Sbjct: 525 FVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETY 584
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH------- 536
L+ N + ++++V+ VRK M + K+ +S + + ++++F DK+H
Sbjct: 585 VLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLIC 644
Query: 537 NQYEDIVYVLKKLYLEM 553
ED++ K L EM
Sbjct: 645 KSLEDLLAKAKNLGYEM 661
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 198/414 (47%), Gaps = 35/414 (8%)
Query: 69 KEDVRPDSSTFTVAL-KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
KE + F V L + C+ + + ++ G ++ FV S ++N+Y KCG M
Sbjct: 56 KEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM 115
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+A FE M R+++V W++++ G V N QP+ A+ ++ M G + ++ AC
Sbjct: 116 EDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHAC 175
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
+ L + G H Y I+ HL+ D V ++L +Y+K G L+ A F + N+++W
Sbjct: 176 SSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWT 235
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
+ +S NG L L +EM S +P+ +L SAL C +I L+LG + ++
Sbjct: 236 SAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKF 295
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG-----------I 355
++ NL + S++ +Y K G A F++M +++WN +IA +
Sbjct: 296 GYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSA 355
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMV 405
G EAL +F ++ ++ +KPD T +S+LS S +E+G + D++V
Sbjct: 356 CQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIV 415
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
S ++ + + G +E A K MST +A W ++++G H
Sbjct: 416 S-----------TSLISMYNKCGSIERASKAFLEMSTRTMIA-WTSMITGFSQH 457
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 194/403 (48%), Gaps = 21/403 (5%)
Query: 1 MIKTNLSAYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFE 59
+IK +L + SVG + +LY + A K F + + V ++ S + A +P +
Sbjct: 191 IIKYHLD-FDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVK 249
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L L+ +MI ED++P+ T T AL C + L++G ++ ++ GY +++ V +S+L
Sbjct: 250 GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLY 309
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMING-----------LVFNGQPREAVDAYKRM 168
LY+K G + EA F +M +V W++MI G L + EA+ + ++
Sbjct: 310 LYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKL 369
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+ G+ D + ++ C+ + G +H +I+ DV V TSL+ MY K G +
Sbjct: 370 NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSI 429
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ AS F MS ++ W ++I+GF+Q+G++ L + +M G P++V+ V L AC
Sbjct: 430 ERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSAC 489
Query: 289 AQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQM--QSRDLI 344
+ G + + +++ V+ ++DM+ + G A +M + + I
Sbjct: 490 SHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI 549
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKP-DHSTFASLLS 386
W+ IA G HG L + +KP D T+ LL+
Sbjct: 550 -WSNFIA--GCRSHGNLELGFYASEQLLSLKPKDPETYVLLLN 589
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 298/575 (51%), Gaps = 80/575 (13%)
Query: 16 IIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I +Y I ARK+F+E+P R V +N+++ Y + ES + L+ DV
Sbjct: 136 VIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLF------DVM 189
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ + T W ++M+ Y K + A
Sbjct: 190 PERNVIT------------------W---------------TAMVTGYAKVKDLEAARRY 216
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ M + +V W++M++G NG E + + M GI+ DE + +I AC+ GD
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK----------------------------- 224
S+ ++ + L+ V+T+L+DMYAK
Sbjct: 277 CLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISA 336
Query: 225 ---TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVS 280
G+LD A +F M N+VTW ++I+G+AQNG + +EL EM + PD V+
Sbjct: 337 YTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 396
Query: 281 LVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ 339
+VS + AC +G L+LG + + T + ++ ++I MYS+CG A+ +F +M
Sbjct: 397 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 456
Query: 340 SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
+RD++S+N +I+ + HGHG EA++L M E ++PD TF +L+A SH+GL+EEGR
Sbjct: 457 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 516
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
F+ + P HYACMVDLL R GE+E+A + ++ M EP V+ +LL+ H
Sbjct: 517 VFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIH 571
Query: 460 KKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSV 519
K+ +GE A K+ +L PD+ G L+SN +A +W++V +R+ M+K G+KK G+S
Sbjct: 572 KQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSW 631
Query: 520 VEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
VE G+LH FI+ D+SH + +DI +L +L +MR
Sbjct: 632 VEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMR 666
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 167/414 (40%), Gaps = 107/414 (25%)
Query: 165 YKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
++ M+ G+ D V LI++ + G+ H + ++ D V+ +++DMYA+
Sbjct: 88 FEHMQGCGVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYAR 142
Query: 225 TGHLDLASHVFKN---------------------------------MSRINIVTW----- 246
G + A VF M N++TW
Sbjct: 143 LGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVT 202
Query: 247 --------------------------GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
A++SG+AQNGLA L L EM + G EPD +
Sbjct: 203 GYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETT 262
Query: 281 LVSALLACAQIGFLKLGKS-IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ-- 337
V+ + AC+ G L S + ++ N + T+++DMY+KCG AR +FD+
Sbjct: 263 WVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELG 322
Query: 338 ------------------------------MQSRDLISWNVIIASYGIHGHGEEALSLFL 367
M R++++WN +IA Y +G A+ LF
Sbjct: 323 AYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFK 382
Query: 368 QMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+MI + PD T S++SA H G +E G W +++ +I+ + + M+ + +R
Sbjct: 383 EMITAKKLTPDEVTMVSVISACGHLGALELGN-WVVRFLTENQIKLSISGHNAMIFMYSR 441
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSG--CHNHKKFSIGEKVAKKVLKLNPD 478
G +E+A ++ M+T + + L+SG H H +I K + PD
Sbjct: 442 CGSMEDAKRVFQEMATRD-VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPD 494
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 290/545 (53%), Gaps = 9/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A ++F+ +P R V ++ ++++ + E L L+ +M P+
Sbjct: 45 LIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPN 104
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + LKAC + G +I V G+ G+DV V +S++ +Y K +A F
Sbjct: 105 EFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVF 161
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDS 193
+ + ++L W+SMI+G GQ R+++ ++ M++ + DE L++AC+ LG +
Sbjct: 162 DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA 221
Query: 194 RFGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G VH R ++ + + +L+D+Y K L +A VF + R N + W +I
Sbjct: 222 REGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 281
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G AQ G + L S G D L S + A ++ GK +H YT +
Sbjct: 282 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL 341
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + S++DMY KCG+ A F +M +R+++SW +I G HGHG EA+ LF +M
Sbjct: 342 DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ 401
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
E V+ D + +LLSA SHSGLV+E R +F + +++P +HYACMVDLL RAGE+
Sbjct: 402 EEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGEL 461
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA +++ SM EP + VW LLS C HK ++G +V +L ++ D+ + ++SN
Sbjct: 462 REAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNIL 521
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVYVLKKL 549
A +W E G+R MR+ G++K G S EV+ E+H F D +H Q DI L+++
Sbjct: 522 AEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREV 581
Query: 550 YLEMR 554
MR
Sbjct: 582 EARMR 586
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 190/388 (48%), Gaps = 10/388 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+A L+ G ++ ++LG+G+D + ++++++Y KCGK++ A F+ M +++
Sbjct: 11 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W++++ G + +G+ RE + + M+ G +E + ++AC G +R G+ +HG
Sbjct: 71 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGV 128
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+R V SLV MY+K A VF + N+ TW ++ISG+A G +
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 188
Query: 263 LELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF---DFNLVLGTSV 318
L + EMQ E PD + S L AC+ +G + G +H R N +L ++
Sbjct: 189 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGAL 248
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+D+Y KC A +FD ++ R+ I W +I + G +EA+ LF + + V+ D
Sbjct: 249 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 308
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
+S+++ + LVE+G+ +K +VD+ + G EA +
Sbjct: 309 HVLSSVVAVFADFALVEQGKQ-VHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 367
Query: 439 SMSTEPGLAVWVALLSGC--HNHKKFSI 464
M + W A+++G H H + +I
Sbjct: 368 EMPAR-NVVSWTAMINGVGKHGHGREAI 394
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 37/442 (8%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
++T + ++ +Y AR++F+ +P R + T+NS+I Y+ + L
Sbjct: 130 VRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 189
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY--GNDVFVGSSML 118
++ +M + D +PD TF LKAC L + G ++ G ++ + ++L
Sbjct: 190 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALL 249
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++YVKC ++ AM F+ ++R++ + W+++I G GQ +EA+ ++R G+ AD
Sbjct: 250 DVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGH 309
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
V+ ++ AD G VH Y+ + LDV V SLVDMY K G A F+ M
Sbjct: 310 VLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREM 369
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+V+W A+I+G ++G ++L EMQ G E D V+ ++ L AC+ G +
Sbjct: 370 PARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVD--- 426
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
RR+ +R D+ + ++ G G
Sbjct: 427 -----ECRRY---------------------FSRICQDRRMRPKAEHYACMVDLLGRAGE 460
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EA L L M ++P + +LLSA V GR D++++ P +Y
Sbjct: 461 LREAKELILSMP---MEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPV--NYV 515
Query: 419 CMVDLLARAGEVEEALKIVDSM 440
+ ++LA AGE E I +M
Sbjct: 516 MLSNILAEAGEWRECQGIRGAM 537
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 8/277 (2%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++A A R G+ +H ++ D + +L+DMYAK G L +A VF M N
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W AL+ GF +G A L L EM+ G P+ +L + L AC G + G IHG
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHG 127
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
VR F+ + V+ S++ MYSK AR +FD + SR+L +WN +I+ Y G G +
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 362 ALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--A 418
+L +F +M +PD TFASLL A S G EG M + + P
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILAG 246
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ + + A+++ D + + W ++ G
Sbjct: 247 ALLDVYVKCHRLPVAMQVFDGLERRNAIQ-WTTVIVG 282
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 298/553 (53%), Gaps = 7/553 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+T + ++ +Y DI A +F ++P V ++N+ I
Sbjct: 228 VIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHA 287
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L QM + P+ T + LKAC +G +I V+ +D ++ ++++
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDM 347
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y K G +++A F+ + ++DLV W+++I+G Q EA+ + RM+KEG D + +
Sbjct: 348 YAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTL 407
Query: 181 MGLIQACADL---GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++++ A L D+R VH + + D V L+D Y K L+ A VF+
Sbjct: 408 AAVLKSTASLEAISDTR---QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK 464
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+I+ + ++I+ +Q ++L MEM G +PD L S L ACA + + G
Sbjct: 465 HGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQG 524
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H + ++R F ++ G +++ Y+KCG A F + + ++SW+ +I H
Sbjct: 525 KQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQH 584
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
GHG+ AL +F +M++ + P+H T S+L A +H+GLV+E + +F+ M + I+ TE+H
Sbjct: 585 GHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEH 644
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YACM+DLL RAG++++A+++V+SM + AVW ALL+ H+ +G A+K+ L
Sbjct: 645 YACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILE 704
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P+ G H L++N +A W++VA VRK M+ S +KK P S VE+ ++H FI+ DKSH
Sbjct: 705 PEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSH 764
Query: 537 NQYEDIVYVLKKL 549
+ DI L +L
Sbjct: 765 PRARDIYAKLDEL 777
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 229/448 (51%), Gaps = 8/448 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPL-RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++A+YGG + AR +F+E R ++N ++ AY + + + ++ +M+ V+P
Sbjct: 141 LVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQP 200
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F+ + AC DL+ G ++ + GY DVF ++++++Y K G + A V F
Sbjct: 201 NEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVF 260
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
K+ D+V W++ I+G V +G + A++ +MK G+ + + +++ACA G
Sbjct: 261 GKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFN 320
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ + + D + LVDMYAK G LD A VF + + ++V W ALISG +
Sbjct: 321 LGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCS 380
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---RFDFN 311
L L M+ GF+ + +L + L + A + + + +H + D +
Sbjct: 381 HGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSH 440
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+V G +ID Y KC + A +F++ S D+I++ +I + HGE+A+ LF++M+
Sbjct: 441 VVNG--LIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLR 498
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ PD +SLL+A + E+G+ ++ + + A +V A+ G +E
Sbjct: 499 KGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNA-LVYTYAKCGSIE 557
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNH 459
+A + S E G+ W A++ G H
Sbjct: 558 DA-DLAFSGLPEKGVVSWSAMIGGLAQH 584
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 235/484 (48%), Gaps = 42/484 (8%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
SAR++F+E+P +++S++ AYS P + LG + M VR + V LK C
Sbjct: 55 SARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA 113
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWS 146
D G ++ A+ G G D+FV ++++ +Y G ++EA + F++ ++ V W+
Sbjct: 114 P--DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWN 171
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+++ V N + AV + M G+ +E ++ AC D G VH IR
Sbjct: 172 GLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRT 231
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ DV +LVDMY+K G + +A+ VF + ++V+W A ISG +G LELL
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELL 291
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKC 325
++M+S G P+ +L S L ACA G LG+ IHG+ V+ D + + ++DMY+K
Sbjct: 292 LQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKH 351
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G+ A+ +FD + RDL+ WN +I+ EALSLF +M + + +T A++L
Sbjct: 352 GLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411
Query: 386 SALSHSGLVEEGR------------------------YW-FDLMVSKYKIQPTEKH---- 416
+ + + + R YW D + Y++ EKH
Sbjct: 412 KSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV--FEKHGSYD 469
Query: 417 ---YACMVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
+ M+ L++ E+A+K+ M +P V +LL+ C + + G++V
Sbjct: 470 IIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 471 KVLK 474
++K
Sbjct: 530 HLIK 533
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 171/344 (49%), Gaps = 11/344 (3%)
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+L+ Y KC A F+++ V WSS++ N PR+A+ A++ M+ + +
Sbjct: 43 LLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCN 102
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
E V+ +++ D G FG +H ++ L D+ V +LV MY G +D A VF
Sbjct: 103 EFVLPVVLKCAPDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFD 159
Query: 237 NM-SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
N V+W L+S + +N +++ EM G +P+ + AC L+
Sbjct: 160 EAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE 219
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+ +H +R +D ++ +++DMYSK G A +F ++ D++SWN I+
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HGH + AL L LQM + + P+ T +S+L A + SG GR MV K
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMV---KANADS 336
Query: 415 KHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
+Y +VD+ A+ G +++A K+ D + + L +W AL+SGC
Sbjct: 337 DNYIAFGLVDMYAKHGLLDDAKKVFDWI-PQRDLVLWNALISGC 379
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 21/200 (10%)
Query: 297 GKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
G IH + ++ F V ++ YSKC +P AR +FD++ +SW+ ++ +Y +
Sbjct: 23 GAHIHAHLLKSGLF-AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNN 81
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG-------LVEEGRYWFDLMVSKYK 409
+AL F M V+ + +L +G L D+ V+
Sbjct: 82 AMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVAN-- 139
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+V + G V+EA + D E W L+S + + S KV
Sbjct: 140 ---------ALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVF 190
Query: 470 KKVL--KLNPDDLGIHALVS 487
+++ + P++ G +V+
Sbjct: 191 GEMVWGGVQPNEFGFSCVVN 210
>gi|356532922|ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 611
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 281/497 (56%), Gaps = 7/497 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR LF+ LP + V + SII + +K P + L+ QM+ + + P++ T + LKAC
Sbjct: 108 ARALFDALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLSSILKACSQ 167
Query: 89 LMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L +L +G+ + G+ N+ V +++++Y + +++A F+++ D VCW++
Sbjct: 168 LENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEPDYVCWTA 227
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGI--DADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+I+ L N + REAV + M G+ + D L+ AC +LG R G VHG +
Sbjct: 228 VISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGWLRMGREVHGKVVT 287
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ +V V++SL+DMY K G + A VF + N V A++ + NG GS L L
Sbjct: 288 LGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNGECGSVLGL 347
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSK 324
+ E +S D S + + AC+ + ++ G +H VRR + ++V+ ++++D+Y+K
Sbjct: 348 VREWRSM---VDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAK 404
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A LF +M++R+LI+WN +I + +G G+E + LF +M++ V+PD +F ++
Sbjct: 405 CGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNV 464
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L A SH+GLV++GR +FDLM +Y I+P HY CM+D+L RA +EEA +++S
Sbjct: 465 LFACSHNGLVDQGRRYFDLMRREYGIRPGVVHYTCMIDILGRAELIEEAESLLESADCRY 524
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
+ W LL C + E++AKK+++L PD + L+ N + KW E +RK
Sbjct: 525 DHSRWAVLLGACTKCSDYVTAERIAKKMIQLEPDFHLSYVLLGNIYRAVGKWNEALEIRK 584
Query: 505 TMRKSGMKKVPGYSVVE 521
M + G+KKVPG S +E
Sbjct: 585 LMEERGVKKVPGKSWIE 601
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 172/342 (50%), Gaps = 8/342 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE--DVR 73
+I +YG + ARK+F+ELP + ++I +R + E + ++ M +
Sbjct: 197 LIDMYGRSRVVDDARKVFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLE 256
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D TF L AC +L L+MG E+ K V LG +VFV SS+L++Y KCG++ A V
Sbjct: 257 VDGFTFGTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVV 316
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F+ ++ K+ V ++M+ NG+ + + + D +I+AC+ L
Sbjct: 317 FDGLEEKNEVALTAMLGVYCHNGECGSVLGLVREWRSM---VDVYSFGTIIRACSGLAAV 373
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
R G VH +RR DV V+++LVD+YAK G +D A +F M N++TW A+I GF
Sbjct: 374 RQGNEVHCQYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGF 433
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-- 311
AQNG +EL EM G PD +S V+ L AC+ G + G+ R +
Sbjct: 434 AQNGRGQEGVELFEEMVKEGVRPDWISFVNVLFACSHNGLVDQGRRYFDLMRREYGIRPG 493
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
+V T +ID+ + + A +L + R D W V++ +
Sbjct: 494 VVHYTCMIDILGRAELIEEAESLLESADCRYDHSRWAVLLGA 535
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 213/440 (48%), Gaps = 36/440 (8%)
Query: 57 PFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
P ++ L Q + ++P + L+AC +G + ++ G+ D FV +S
Sbjct: 36 PKALILLKAQAQAQALKP--VVYASLLQACRKAHSFPLGTHLHAHVLKSGFLADRFVANS 93
Query: 117 MLNLYVKCGK-MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA 175
+L+LY K ++A F+ + KD++ W+S+I+G V QP+ AV + +M + I+
Sbjct: 94 LLSLYSKLSPHFSQARALFDALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEP 153
Query: 176 DEVVMMGLIQACADLGDSRFGLSVHGYSIRR--HLNLDVKVQTSLVDMYAKTGHLDLASH 233
+ + +++AC+ L + G ++H R H N +V V +L+DMY ++ +D A
Sbjct: 154 NAFTLSSILKACSQLENLHLGKTLHAVVFIRGFHSNNNV-VACALIDMYGRSRVVDDARK 212
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ--SCGFEPDSVSLVSALLACAQI 291
VF + + V W A+IS A+N + + M G E D + + L AC +
Sbjct: 213 VFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNL 272
Query: 292 GFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVII 350
G+L++G+ +HG V N+ + +S++DMY KCG CAR +FD ++ ++ ++ +
Sbjct: 273 GWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVA---LT 329
Query: 351 ASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY----------W 400
A G++ H E S+ + E D +F +++ A S V +G W
Sbjct: 330 AMLGVYCHNGECGSVLGLVREWRSMVDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGW 389
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
D++V + +VDL A+ G V+ A ++ M L W A++ G +
Sbjct: 390 RDVVVE-----------SALVDLYAKCGSVDFAYRLFSRMEAR-NLITWNAMIGGFAQNG 437
Query: 461 KFSIGEKVAKKVLK--LNPD 478
+ G ++ ++++K + PD
Sbjct: 438 RGQEGVELFEEMVKEGVRPD 457
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 299/606 (49%), Gaps = 67/606 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++++ + AR +F E+P R ++ +++ +R E + M + P
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L +C +G ++ V+LG G+ V V +S+LN+Y KCG A FE
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 223
Query: 136 KMQ------------------RKDL-------------VCWSSMINGLVFNGQPREAVDA 164
+M R DL V W++MI G NG +A+
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 165 YKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ RM E + DE + ++ ACA+LG+ R G VH Y +R + + +V +L+ YA
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 224 KTGHLDLASHV---------------------------------FKNMSRINIVTWGALI 250
K+G ++ A + F M+ ++V W A+I
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G+ QNG ++L M +CG EP+S +L + L CA + L GK IH +R +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + ++I MY++ G AR +FDQ+ R + I+W +I + HG GEEA+ LF +
Sbjct: 464 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 523
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ V+PD T+ +LSA SH+G V EG+ ++D + ++++I P HYACMVDLLARAG
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
EA + + M EP W +LLS C HK + E A+K+L ++P++ G ++ ++N
Sbjct: 584 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 643
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
++ +W + A + K ++ ++K G+S + ++H F +D H Q + + + +
Sbjct: 644 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAAR 703
Query: 549 LYLEMR 554
++ E++
Sbjct: 704 MWEEIK 709
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 190/453 (41%), Gaps = 101/453 (22%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+VF +S+L+++ K G++ +A F +M +D V W+ M+ GL G+ EA+ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT---- 225
+G + + ++ +CA G VH + ++ L V V S+++MY K
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216
Query: 226 ---------------------------GHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
G +DLA +F++M +IV+W A+I+G+ QNGL
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276
Query: 259 AGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR----------- 306
L+L M PD ++ S L ACA +G +++GK +H Y +R
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336
Query: 307 -----------------------RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
D N++ T++++ Y K G AR +F M +RD+
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---- 399
++W +I Y +G +EA+ LF MI +P+ T A++LS + ++ G+
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456
Query: 400 ---------------------------WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
W M + + + M+ LA+ G+ EE
Sbjct: 457 AIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516
Query: 433 ALKIVDSM---STEPGLAVWVALLSGCHNHKKF 462
A+ + + M EP +V +LS C +H F
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSAC-SHAGF 548
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 82/349 (23%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT----GHLDLASHVFKN- 237
L+Q C + G ++H +++ L + +L+ Y +T G L A +F
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 238 -MSRINIVTWGALISGFAQNG-LA------------------------------GSTLEL 265
++R N+ TW +L+S FA++G LA G ++
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSK 324
L++M + GF P +L + L +CA +G+ +H + V+ + V + SV++MY K
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211
Query: 325 CG-----------VP--------------------SCARALFDQMQSRDLISWNVIIASY 353
CG +P A +LF+ M R ++SWN +IA Y
Sbjct: 212 CGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY 271
Query: 354 GIHGHGEEALSLFLQMI-ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+G +AL LF +M+ E+ + PD T S+LSA ++ G V G+ V Y I
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK-----QVHAY-ILR 325
Query: 413 TEKHY-----ACMVDLLARAGEVEEALKIVD-SMSTEPGLAVWVALLSG 455
TE Y ++ A++G VE A +I+D SM T+ + + ALL G
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 307/562 (54%), Gaps = 17/562 (3%)
Query: 5 NLSAYGN--SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+L+ Y N S +I Y + I AR++F+E+P + +YN++I AY+ + L
Sbjct: 68 DLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALR 127
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ ++ + D T + + AC D+ + ++ V GY V +++L Y
Sbjct: 128 LFAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYS 185
Query: 123 KCGKMNEAMVAFEKMQR---KDLVCWSSMINGLVFNGQPRE---AVDAYKRMKKEGIDAD 176
+ G +NEA F +M +D V W++MI V GQ RE AV+ ++ M + G+ D
Sbjct: 186 RKGFLNEARRVFREMGEGGGRDEVSWNAMI---VACGQHREGLEAVELFREMVRRGLKVD 242
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT-GHLDLASHVF 235
M ++ A + D G+ HG I+ + + V + L+D+Y+K G + VF
Sbjct: 243 MFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302
Query: 236 KNMSRINIVTWGALISGFAQ-NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
+ ++ ++V W +ISGF+Q L+ + EMQ GF PD S V AC+ +
Sbjct: 303 EEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP 362
Query: 295 KLGKSIHGYTVRR-FDFNLV-LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+GK +H ++ +N V + +++ MYSKCG AR +FD M +++S N +IA
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y HG E+L LF M++ + P+ TF ++LSA H+G VEEG+ +F++M +++I+P
Sbjct: 423 YAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEP 482
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+HY+CM+DLL RAG+++EA +I+++M PG W LL C H + K A +
Sbjct: 483 EAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF 542
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
L+L P + + ++SN +A +WEE A V++ MR+ G+KK PG S +E++ ++H F+ E
Sbjct: 543 LQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAE 602
Query: 533 DKSHNQYEDIVYVLKKLYLEMR 554
D SH ++I + ++ +M+
Sbjct: 603 DTSHPMIKEIHVYMGEILRKMK 624
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 171/401 (42%), Gaps = 41/401 (10%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF LKAC++ DL G+ + + ++ + LY KCG ++ A +F+
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 138 Q-------------------------------RKDLVCWSSMINGLVFNGQPREAVDAYK 166
Q + D+V ++++I G+ R A+ +
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+++ D + G+I AC D D +H + + + V +++ Y++ G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188
Query: 227 HLDLASHVFKNMSR---INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
L+ A VF+ M + V+W A+I Q+ +EL EM G + D ++ S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248
Query: 284 ALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC--GVPSCARALFDQMQS 340
L A + L G HG ++ F N +G+ +ID+YSKC G+ C R +F+++ +
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVEC-RKVFEEIAA 307
Query: 341 RDLISWNVIIASYGIHGH-GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
DL+ WN +I+ + + E+ + F +M PD +F + SA S+ G+
Sbjct: 308 PDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQ 367
Query: 400 WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
L + +V + ++ G V +A ++ D+M
Sbjct: 368 VHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSC 330
C F + + L AC L GK++H Y + L +YSKCG
Sbjct: 3 CTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHN 62
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A+ FD Q ++ S+N +I +Y H + L Q+ + + +PD ++ +L++A +
Sbjct: 63 AQTSFDLTQYPNVFSYNTLINAYAKHS----LIHLARQVFDEIPQPDIVSYNTLIAAYAD 118
Query: 391 SG 392
G
Sbjct: 119 RG 120
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 289/498 (58%), Gaps = 11/498 (2%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+++ + P T+ + + +C L + + R +E G+ D F+ + ++N+Y
Sbjct: 60 ELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFD 119
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
++ A F+K + + + ++++ L G E ++ Y+RM GI +D +++
Sbjct: 120 SIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLK 179
Query: 186 ACADLGDSRF------GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
AC + F G +H + +R + V + T+LVDMYAK G + AS VF M
Sbjct: 180 AC--VASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMP 237
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLG 297
N+V+W A+I+ +A+NG A LEL E+ ++ P+SV++VS L ACA + L+ G
Sbjct: 238 VKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQG 297
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IHGY +R+ D L + ++++ MY++CG + +FDQM RD++SWN +I+SYG+H
Sbjct: 298 RLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVH 357
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G G++A+ +F +M V+P +F S+L A SH+GLV+EG+ F+ M + I P+ +H
Sbjct: 358 GFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEH 417
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
YACMVDLL RA +EEA KI+++M EPG VW +LL C H + E+ + ++ L
Sbjct: 418 YACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLE 477
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P + G + L+++ +A W+ V V+K + G++KVPG S +EV ++++F+ D+ +
Sbjct: 478 PTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVN 537
Query: 537 NQYEDIVYVLKKLYLEMR 554
+ E + +L KL +E++
Sbjct: 538 PRMEQLHALLVKLSMELK 555
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 157/290 (54%), Gaps = 6/290 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y + I +ARK+F++ R + YN++ A S EVL +Y +M +
Sbjct: 110 KLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPS 169
Query: 75 DSSTFTVALKACVS----LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV+ + L G EI + GY V + ++++++Y K G ++ A
Sbjct: 170 DRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNA 229
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID--ADEVVMMGLIQACA 188
F +M K++V WS+MI NG+ EA++ ++ + E D + V M+ ++QACA
Sbjct: 230 SCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACA 289
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +R+ L+ + V ++LV MYA+ G L+L VF M + ++V+W +
Sbjct: 290 ALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNS 349
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
LIS + +G + + EM G EP +S VS L AC+ G + GK
Sbjct: 350 LISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGK 399
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ Y + + ++ +Y + +A +F ++P++ V +++++I Y++ FE
Sbjct: 201 ILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEA 260
Query: 61 LGLYNQMIKE--DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L L+ +++ E D+ P+S T L+AC +L L+ G I + G + + V S+++
Sbjct: 261 LELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALV 320
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y +CGK+ F++M ++D+V W+S+I+ +G ++A+ ++ M G++ +
Sbjct: 321 TMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPI 380
Query: 179 VMMGLIQACADLGDSRFG-LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+ ++ AC+ G G + + + + V+ +VD+ + L+ A+ + +N
Sbjct: 381 SFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIEN 440
Query: 238 MSRIN--IVTWGALI 250
M RI WG+L+
Sbjct: 441 M-RIEPGPKVWGSLL 454
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 299/606 (49%), Gaps = 67/606 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++++ + AR +F E+P R ++ +++ +R E + M + P
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L +C +G ++ V+LG G+ V V +S+LN+Y KCG A FE
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFE 223
Query: 136 KMQ------------------RKDL-------------VCWSSMINGLVFNGQPREAVDA 164
+M R DL V W++MI G NG +A+
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 165 YKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ RM E + DE + ++ ACA+LG+ R G VH Y +R + + +V +L+ YA
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 224 KTGHLDLASHV---------------------------------FKNMSRINIVTWGALI 250
K+G ++ A + F M+ ++V W A+I
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G+ QNG ++L M +CG EP+S +L + L CA + L GK IH +R +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQ 368
+ + ++I MY++ G AR +FDQ+ R + I+W +I + HG GEEA+ LF +
Sbjct: 464 RSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 523
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ V+PD T+ +LSA SH+G V EG+ ++D + ++++I P HYACMVDLLARAG
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
EA + + M EP W +LLS C HK + E A+K+L ++P++ G ++ ++N
Sbjct: 584 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 643
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
++ +W + A + K ++ ++K G+S + ++H F +D H Q + + + +
Sbjct: 644 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAAR 703
Query: 549 LYLEMR 554
++ E++
Sbjct: 704 MWEEIK 709
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 190/453 (41%), Gaps = 101/453 (22%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+VF +S+L+++ K G++ +A F +M +D V W+ M+ GL G+ EA+ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT---- 225
+G + + ++ +CA G VH + ++ L V V S+++MY K
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216
Query: 226 ---------------------------GHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
G +DLA +F++M +IV+W A+I+G+ QNGL
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276
Query: 259 AGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR----------- 306
L+L M PD ++ S L ACA +G +++GK +H Y +R
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336
Query: 307 -----------------------RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
D N++ T++++ Y K G AR +F M +RD+
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY---- 399
++W +I Y +G +EA+ LF MI +P+ T A++LS + ++ G+
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456
Query: 400 ---------------------------WFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
W M + + + M+ LA+ G+ EE
Sbjct: 457 AIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516
Query: 433 ALKIVDSM---STEPGLAVWVALLSGCHNHKKF 462
A+ + + M EP +V +LS C +H F
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSAC-SHAGF 548
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 82/349 (23%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT----GHLDLASHVFKN- 237
L+Q C + G ++H +++ L + +L+ Y +T G L A +F
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 238 -MSRINIVTWGALISGFAQNG-LA------------------------------GSTLEL 265
++R N+ TW +L+S FA++G LA G ++
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSK 324
L++M + GF P +L + L +CA +G+ +H + V+ + V + SV++MY K
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211
Query: 325 CG-----------VP--------------------SCARALFDQMQSRDLISWNVIIASY 353
CG +P A +LF+ M R ++SWN +IA Y
Sbjct: 212 CGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGY 271
Query: 354 GIHGHGEEALSLFLQMI-ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
+G +AL LF +M+ E+ + PD T S+LSA ++ G V G+ V Y I
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK-----QVHAY-ILR 325
Query: 413 TEKHY-----ACMVDLLARAGEVEEALKIVD-SMSTEPGLAVWVALLSG 455
TE Y ++ A++G VE A +I+D SM T+ + + ALL G
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 293/545 (53%), Gaps = 56/545 (10%)
Query: 18 ALYGG---KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
A+ GG N I A KLF E+P + V ++N++I Y++ + L+ +M + +V
Sbjct: 120 AMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV-- 177
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
V+ +S++ E R+ + DV ++M+ K G+++EA + F
Sbjct: 178 ------VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLF 231
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +++V W++MI G N + EA+D ++RM + + + ++ GLIQ
Sbjct: 232 DRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQ--------- 282
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G L A +F M + N+++W +I+G
Sbjct: 283 ------------------------------NGDLRRARKLFNEMPKKNVISWTTMITGCV 312
Query: 255 QNGLAGSTLELLMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--DFN 311
Q G + L++ M S G +P+ + VS L AC+ + L G+ +H + D
Sbjct: 313 QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDST 372
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
V+ +++I+MYSKCG AR +FD RDL+SWN IIA+Y HG+G+EA++ F +M
Sbjct: 373 FVV-SALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEM 431
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ KPD T+ LLSA SH+GLVEEG +FD +V I E HYAC+VDL RAG
Sbjct: 432 RKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGR 491
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
++EA ++ + T+P VW ALL+GC+ H IG++ AKK+L++ P++ G + L+SN
Sbjct: 492 LKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNI 551
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+A KW E A VR M+ G+KK PG S +EV +H F++ DKSH+Q + I +L+ L
Sbjct: 552 YASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDL 611
Query: 550 YLEMR 554
+ +M+
Sbjct: 612 HSKMK 616
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 182/417 (43%), Gaps = 63/417 (15%)
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
M+ K G++ EA F++M+ D++ W+++I+G + G EA + R +DA
Sbjct: 58 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR-----VDAK 112
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ +V T++V Y ++ + A +F
Sbjct: 113 K---------------------------------NVVTWTAMVGGYIRSNKISDAEKLFN 139
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M N+V+W +I G+AQNG S + L +M E + VS + + AQ G ++
Sbjct: 140 EMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP----ERNVVSWNTVMSMLAQCGRIEE 195
Query: 297 GKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ + R +++ T++I SK G AR LFD+M R+++SWN +I Y +
Sbjct: 196 ARRLFDRMPER---DVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQN 252
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
+EAL LF E M + D ++ ++++ L +G + R F+ M K I
Sbjct: 253 LRLDEALDLF----ERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVIS----- 303
Query: 417 YACMVDLLARAGEVEEALKIVDSM----STEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+ M+ + GE EEALKI M +P +V++L C N G++V + +
Sbjct: 304 WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII 363
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
K D +VS M K E+ RK M GM +V NG + A+
Sbjct: 364 SKTVYQDSTF--VVSALINMYSKCGELGTARK-MFDDGM--TSQRDLVSWNGIIAAY 415
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 34/175 (19%)
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-- 366
D N+ +I SK G AR LFD+M+ D+I+W +I+ Y G EEA LF
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108
Query: 367 --------------------------LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
++ M + ++ +++ + +G ++ Y
Sbjct: 109 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
F+ M + + + ++ +LA+ G +EEA ++ D M E + W A+++G
Sbjct: 169 FEKMPERNVVS-----WNTVMSMLAQCGRIEEARRLFDRMP-ERDVISWTAMIAG 217
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 304/531 (57%), Gaps = 6/531 (1%)
Query: 29 ARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKAC 86
A KLF E+ +R V +++ +I + + + ++ M+ E + PD T LKAC
Sbjct: 201 AHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKAC 260
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
+L D+ +G + + G +D+FVG+S++++Y KC ++ A AF+++ K+++ W+
Sbjct: 261 TNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWN 320
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
M++ + N EA+ M +EG + DEV + ++Q DS SVHG IR+
Sbjct: 321 LMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRK 380
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL 266
+ + S++D YAK ++LA VF M++ ++V W +I+GFA+NG + +
Sbjct: 381 GYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVF 440
Query: 267 MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+M P++VS+++ + ACA L+ K HG VRR + +GTS+IDMYSKC
Sbjct: 441 KQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKC 499
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G + F+Q+ ++++ W+ +I+++ I+G EAL LF ++ + KP+ T SLL
Sbjct: 500 GDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLL 559
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST--E 443
SA SH GL+EEG +F MV K+ I+P +HY+C+VD+L+RAG+ EAL++++ + E
Sbjct: 560 SACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEME 619
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
G ++W LLS C ++ S+G A +VL+L P + L SN +A + A +R
Sbjct: 620 AGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMR 679
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+ ++ G+K V GYS+V +N + F+ D + + ++I ++KKL+ M+
Sbjct: 680 RLAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIYLMVKKLHGVMK 730
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 222/460 (48%), Gaps = 19/460 (4%)
Query: 59 EVLGLYNQM-IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSM 117
E L LY+++ I D+ LKAC S +G + ++ G + + +S
Sbjct: 30 EALQLYHEIRISGAQLSDTWVLPSILKAC-SNTSFNLGTAMHGCLIKQGCQSSTSIANST 88
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
++ Y+K G ++ A AF+ + KD V W+ M++G NG + + + + +
Sbjct: 89 IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNI 148
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ +IQA +L G + HGY R + + VQ SL+ +YA+ H+ A +F
Sbjct: 149 SSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGE 207
Query: 238 MS-RINIVTWGALISGFAQNGLAGSTLELLMEMQS-CGFEPDSVSLVSALLACAQIGFLK 295
MS R ++V+W +I GF Q G + M + G PD V++VS L AC + +
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267
Query: 296 LGKSIHGYTV-RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
LG +HG + R + +L +G S+IDMYSKC A F ++ +++ISWN+++++Y
Sbjct: 268 LGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYI 327
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
++ EAL+L M+ + D T A++L H + R +++ K + E
Sbjct: 328 LNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRK-GYESNE 386
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK----FSIGEKVAK 470
++D A+ VE A + D M+ + +A W +++G + K S+ +++ +
Sbjct: 387 LLLNSVIDAYAKCNLVELARMVFDGMNKKDVVA-WSTMIAGFARNGKPDEAISVFKQMNE 445
Query: 471 KVLKLNPDDLGIHALVSNFFA----MEQKWEEVAGVRKTM 506
+V+ P+++ I L+ + KW VR+ +
Sbjct: 446 EVI---PNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL 482
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDSRF 195
++ DL+ S I ++G +EA+ Y ++ G +D V+ +++AC++
Sbjct: 10 LRLSDLI---SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNL 65
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G ++HG I++ + S +D Y K G LD A F + + V+W ++ G
Sbjct: 66 GTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFS 125
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG + L ++ + F+P+ SL+ + A ++ G + HGY R F L +
Sbjct: 126 NGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSV 185
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMI-ET 372
S++ +Y++ + A LF +M R D++SW+V+I + G E+ +F M+ E
Sbjct: 186 QNSLLSLYAEVHM-YFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEA 244
Query: 373 MVKPDHSTFASLLSALSH 390
+ PD T S+L A ++
Sbjct: 245 GIPPDGVTVVSVLKACTN 262
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 285/540 (52%), Gaps = 18/540 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM-IKEDVRPDSSTFTVALKACV 87
A ++F + R V ++ ++++ + R L L +M + P+ T + +LKAC
Sbjct: 11 ACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACC 70
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWS 146
+ D G I V GY V SS++ +Y K G++ +A F+ + W+
Sbjct: 71 VVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWN 130
Query: 147 SMINGLVFNGQPREAVDAYKRMKK-EGI-DADEVVMMGLIQACADLGDSRFGLSVH---- 200
+M++G G R+A+ ++ M++ EG DE L++AC+ LG +R G VH
Sbjct: 131 AMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMT 190
Query: 201 --GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
G+S + L +LVDMY K L +A VF+ + R N++ W A++ G AQ G
Sbjct: 191 ASGFSTASNAIL----AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQ 246
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
LEL G PDS L S + A ++ G+ +H Y ++ ++ G S
Sbjct: 247 VTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNS 306
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMY KCG+P A +F +M++ +++SW ++ G HG G EA++LF +M V+PD
Sbjct: 307 IVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPD 366
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T+ +LLSA SH+GLV+E R +F + ++P +HYACMVDLL RAGE+ EA ++
Sbjct: 367 EVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLI 426
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
+M EP + VW LLS C HK ++G + +L ++ D+ + +SN A +W
Sbjct: 427 RTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWR 486
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI---MEDKSHNQYEDIVYVLKKLYLEMR 554
E VR MR+ G+KK G S VEV E+H F E+++H Q DI VL+ + MR
Sbjct: 487 ECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMR 546
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 171/351 (48%), Gaps = 17/351 (4%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEV 178
+YVKCG+++ A F M+ +++V W++++ G + +G + M+ A +E
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++AC +GD+ G+ +HG +R V +SLV +Y+K G + A VF
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 239 S-RINIVTWGALISGFAQNGLAGSTLELLMEMQ--SCGFEPDSVSLVSALLACAQIGFLK 295
I TW A++SG+A G L + EM+ +PD + S L AC+ +G +
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 296 LGKSIH-GYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
G +H T F N +L +++DMY KC A +F++++ +++I W ++
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ- 411
+ G EAL LF + + +PD +S++ L+ LVE+GR V Y I+
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR-----QVHCYGIKD 295
Query: 412 PTEKHYAC---MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
PT + +VD+ + G +EA ++ M P + W +++G H
Sbjct: 296 PTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRA-PNVVSWTTMVNGLGKH 345
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 1 MIKTNLSAYGNSV--GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
M + S N++ G ++ +Y + A ++FE L + V + ++++ ++++
Sbjct: 189 MTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVT 248
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L L+ + + RPDS + + ++ G ++ ++ G DV G+S++
Sbjct: 249 EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIV 308
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y+KCG +EA F +M+ ++V W++M+NGL +G REAV ++ M+ G++ DEV
Sbjct: 309 DMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEV 368
Query: 179 VMMGLIQACADLG---DSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASH 233
+ L+ AC+ G + R S IRR + K + +VD+ + G L A
Sbjct: 369 TYLALLSACSHAGLVDECRRYFSC----IRRDRTVRPKAEHYACMVDLLGRAGELREARD 424
Query: 234 VFKNMS-RINIVTWGALIS 251
+ + M + W L+S
Sbjct: 425 LIRTMPMEPTVGVWQTLLS 443
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 299/523 (57%), Gaps = 5/523 (0%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
AR LF+E+P R V + ++I Y+ + ++ M+K + P++ T + LKAC
Sbjct: 63 ARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTISSVLKACK 122
Query: 88 SLMDLKMGEEIWRKAVELGYGND-VFVGSSMLNLYVKCG-KMNEAMVAFEKMQRKDLVCW 145
+ + G + A++ + ++V ++++++Y CG M +A V F ++ K++V W
Sbjct: 123 GMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVVFHDIKEKNVVSW 182
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+++I G G A+ ++ M +G+ + + ++ACA +G FG +H I+
Sbjct: 183 TTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIGSQNFGRQIHTAVIK 242
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
D+ V S++DMY + G L A+ F +M+ +++TW LI+G+ ++ + +
Sbjct: 243 HGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSD-SIEPFFI 301
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
+M+S GF P+ + S + ACA L+ G+ +HG RR D NL L ++IDMY+K
Sbjct: 302 FSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAK 361
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG ++ F +M +L+SW ++ YG HG+G+EA+ LF +M+ + ++PD F ++
Sbjct: 362 CGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAV 421
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L A SH+GLV++G + + M++ Y I+P ++ Y C+VDLL R G VE+A +++ SM
Sbjct: 422 LHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMA 481
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
+VW ALL C H +G+ AKK L L P+ + + ++SN +A E KW E A +RK
Sbjct: 482 DESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVMLSNIYAAEGKWGEAARMRK 541
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
M+++G +KV G S +EV ++++F++ +K + E + VL+
Sbjct: 542 LMKRAGCRKVAGRSWIEVRNQVYSFVVGNKMGSHKEWVYEVLE 584
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 175/353 (49%), Gaps = 11/353 (3%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ + +L Y + G ++A F++M +D+V W++MI+G + +A + M K G
Sbjct: 46 LATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNG 105
Query: 173 ID-ADEVVMMGLIQACADLGDSRFGLSVHGYSI-RRHLNLDVKVQTSLVDMYAKTG-HLD 229
D + + +++AC + G VHG +I RR + + V +L+DMYA G +
Sbjct: 106 NDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMR 165
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLA 287
A VF ++ N+V+W LI+G+ G L++ EM P S+S+ A+ A
Sbjct: 166 DACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISI--AVRA 223
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISW 346
CA IG G+ IH ++ F+ +L + S++DMY +CG S A F+ M +DLI+W
Sbjct: 224 CASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITW 283
Query: 347 NVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVS 406
N +IA Y E +F QM P+ TF SL++A +++ ++ G+ +
Sbjct: 284 NTLIAGYE-RSDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFR 342
Query: 407 KYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ E A ++D+ A+ G + ++ K MS L W +++ G H
Sbjct: 343 RGLDGNLELANA-LIDMYAKCGNIIDSQKNFSEMSCT-NLVSWTSMMIGYGTH 393
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 124/237 (52%), Gaps = 3/237 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ +Y + A K F ++ + + T+N++I Y R +S E +++QM E P+
Sbjct: 255 ILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSDS-IEPFFIFSQMESEGFSPN 313
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT + AC + L+ G+++ G ++ + ++++++Y KCG + ++ F
Sbjct: 314 CFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFS 373
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +LV W+SM+ G +G +EAV+ + M + GI D+VV M ++ AC+ G
Sbjct: 374 EMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQ 433
Query: 196 GLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI-NIVTWGALI 250
GL I H+ + ++ +VD+ + G ++ A + ++M + + WGAL+
Sbjct: 434 GLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALL 490
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L T ++ Y + G+ S AR LFD+M RD+++W +I+ Y +A S+F+ M++
Sbjct: 45 ILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKN 104
Query: 373 MVKPDHS-TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
P ++ T +S+L A V GR L + + ++ ++D+ A G
Sbjct: 105 GNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGM 164
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVL----KLNPDDLGI 482
+V E + W L++G + + ++ +++L LNP + I
Sbjct: 165 RDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISI 219
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 272/497 (54%), Gaps = 7/497 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+ AC L I + VF+ +S+++LY KCG + +A F+ M +D+
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+S+I G N P EA+ M + + L++A S G +H
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+++ + DV V ++L+DMYA+ G +D+A VF + N V+W ALI+GFA+ G +T
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDM 321
L + EMQ GFE + S A A IG L+ GK +H + ++ + + +G +++DM
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+K G AR +FD++ +D+++WN ++ ++ +G G EA++ F +M + V + TF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
S+L+A SH GLV+EG+ +FD+M +Y ++P HY +VDLL RAG + +AL + M
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
+P AVW ALL C HK IG+ A V +L+PDD G L+ N +A +W+ A
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI----- 556
VRK M+ +G+KK P S VE+ +H F+ D +H + E+I +++ +++R
Sbjct: 490 VRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPN 549
Query: 557 SSWLQGHMEEHEEHDPL 573
+ ++ H++E E L
Sbjct: 550 TDYVLLHVDEQERQAKL 566
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 181/346 (52%), Gaps = 8/346 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+ +P R + ++ S+I Y++ + P E LGL M++ +P+
Sbjct: 105 LIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKA + +GE+I V+ + +DV+VGS++L++Y +CG+M+ A+ F+
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ K+ V W+++I G G + + M++ G +A + A A +G
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L V +++DMYAK+G + A VF + + ++VTW ++++ FAQ
Sbjct: 285 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ 344
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
GL + EM+ CG + ++ +S L AC+ G +K GK Y ++NL
Sbjct: 345 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ---YFDMMKEYNLEPE 401
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+V+D+ + G+ + A +M + + W ++ S +H
Sbjct: 402 IDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 162/312 (51%), Gaps = 24/312 (7%)
Query: 158 PREAVDAYKRMKKEGIDADEVVMM-----GLIQACA---DLGDSRFGLSVHGYSIRRHLN 209
P A R + +DA E+ LI ACA L D+R ++H +
Sbjct: 40 PAAASTGIIRDTLDSVDARELAATPRLYHSLITACARYRSLDDAR---AIHAHLAGSQFA 96
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
V + SL+ +Y K G + A VF M ++ +W +LI+G+AQN + L LL M
Sbjct: 97 GSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM 156
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGV 327
F+P+ + S L A +G+ IH TV ++D+ ++ +G++++DMY++CG
Sbjct: 157 LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV-KYDWHDDVYVGSALLDMYARCGR 215
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A A+FDQ++S++ +SWN +IA + G GE L +F +M + H T++S+ SA
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA----CMVDLLARAGEVEEALKIVDSMSTE 443
++ G +E+G++ V + I+ E+ A ++D+ A++G + +A K+ D + +
Sbjct: 276 IAGIGALEQGKW-----VHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKK 330
Query: 444 PGLAVWVALLSG 455
+ W ++L+
Sbjct: 331 -DVVTWNSMLTA 341
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 297/541 (54%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y I AR +F + R + ++NS+I ++ + E + L+ Q+++ ++PD
Sbjct: 363 LINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPD 422
Query: 76 SSTFTVALKACVSLMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T T LKA SL + L + ++I A++ D FV +++++ Y + M EA V F
Sbjct: 423 HYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF 482
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ DLV W++M++G + + ++ + M K+G +D+ + +++ C L
Sbjct: 483 GR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAIN 541
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH Y+I+ +LD+ V + ++DMY K G + A F ++ + V W LISG
Sbjct: 542 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCI 601
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+NG L + +M+ G PD ++ + A + + L+ G+ IH ++ +
Sbjct: 602 ENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPF 661
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+GTS++DMY+KCG A LF +++ ++ +WN ++ HG G+EAL LF QM
Sbjct: 662 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLG 721
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+KPD TF +LSA SHSGLV E + M Y I+P +HY+C+ D L RAG V+EA
Sbjct: 722 IKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEA 781
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++DSMS E +++ LL+ C G++VA K+L+L P D + L+SN +A
Sbjct: 782 ENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 841
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
KW+E+ R M+ +KK PG+S +EV ++H F+++D+S+ Q E I +K + ++
Sbjct: 842 SKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDI 901
Query: 554 R 554
+
Sbjct: 902 K 902
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 178/383 (46%), Gaps = 38/383 (9%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRK-----ESPFEVLGLYNQM 67
V +I++Y + AR++F+++P R + ++NSI+ AY++ E+ E L+ +
Sbjct: 84 VNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRIL 143
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
++ V T + LK C+ + E A ++G D FV +++N+Y+K GK+
Sbjct: 144 RQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKV 203
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
E V FE+M +D+V W+ M+ + G EA+D G+ +E+ + L +
Sbjct: 204 KEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRIS 263
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
D DS G VK + D A + I++
Sbjct: 264 GD--DSEAG--------------QVKSFENGNDASAVS----------------EIISRN 291
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
++SG+ G + L+ M+M E D V+ + L ++ L LG+ +H ++
Sbjct: 292 KILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKL 351
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
D L + S+I+MY K AR +F+ M RDLISWN +IA EA+ LF
Sbjct: 352 GLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLF 411
Query: 367 LQMIETMVKPDHSTFASLLSALS 389
+Q++ +KPDH T S+L A S
Sbjct: 412 MQLLRCGLKPDHYTMTSVLKAAS 434
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 222/498 (44%), Gaps = 62/498 (12%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ +Y + R LFEE+P R V +N ++ AY E + L + +
Sbjct: 191 GALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLH 250
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ L + +S D + G+ K+ E G N+A
Sbjct: 251 PNE--ITLRLLSRISGDDSEAGQ---VKSFENG---------------------NDASAV 284
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
E + R + +++G + GQ + + M + ++ D+V + ++ L
Sbjct: 285 SEIISR------NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSL 338
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G VH +++ L+L + V SL++MY K + LA VF NMS ++++W ++I+G
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIG-FLKLGKSIHGYTVRRFDF-N 311
AQ+ L + L M++ CG +PD ++ S L A + + L L K IH + ++ + +
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ T++ID YS+ A LF + + DL++WN +++ Y G + L LF M +
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHK 517
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGR----------YWFDLMVSKYKIQPTEKHYACMV 421
+ D T A++L + +G+ Y DL VS + ++
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS-----------SGIL 566
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIGEKVAKKVLKLNPDD 479
D+ + G++ A DS+ P W L+SGC + ++ ++ +++ + PD+
Sbjct: 567 DMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDE 625
Query: 480 LGIHALV---SNFFAMEQ 494
I L S A+EQ
Sbjct: 626 FTIATLAKASSCLTALEQ 643
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 136/312 (43%), Gaps = 40/312 (12%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ +S DL +G+ + + L + F+ ++++++Y KCG + A F+KM +DL
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 143 VCWSSMI-------NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
V W+S++ G+V N +EA ++ ++++ + + + +++ C G
Sbjct: 113 VSWNSILAAYAQSSEGVVEN--VKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
S HGY+ + L+ D V +LV++Y K G + +F+ M ++V W ++ + +
Sbjct: 171 SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLE 230
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
G ++L + G P+ ++ L+L I G
Sbjct: 231 MGFKEEAIDLSSAFHTSGLHPNEIT-------------LRLLSRISGDD----------- 266
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
S+ G D ++IS N I++ Y G L F+ M+E+ ++
Sbjct: 267 -------SEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLE 319
Query: 376 PDHSTFASLLSA 387
D TF +L+
Sbjct: 320 CDQVTFILVLAT 331
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
G ++ D G H + N + + +L+ MY+K G L A VF M
Sbjct: 51 GFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER 110
Query: 242 NIVTWGALISGFAQN--GLAGSTLE---LLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
++V+W ++++ +AQ+ G+ + E L ++ ++L L C G++
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
+S HGY + D + + +++++Y K G R LF++M RD++ WN+++ +Y
Sbjct: 171 SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLE 230
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
G EEA+ L + + P+ T LLS +S
Sbjct: 231 MGFKEEAIDLSSAFHTSGLHPNEITL-RLLSRIS 263
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 270 QSCGFEPDSVSLVSALLA-CAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVP 328
Q GF D++S +L C L L ++ + V ++I MYSKCG
Sbjct: 48 QCFGFLRDAISTSDLMLGKCTHARILALEENPERFLV----------NNLISMYSKCGSL 97
Query: 329 SCARALFDQMQSRDLISWNVIIASYGIHGHG-----EEALSLFLQMIETMVKPDHSTFAS 383
+ AR +FD+M RDL+SWN I+A+Y G +EA LF + + +V T +
Sbjct: 98 TYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSP 157
Query: 384 LLSALSHSGLV 394
+L HSG V
Sbjct: 158 MLKLCLHSGYV 168
>gi|297819530|ref|XP_002877648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323486|gb|EFH53907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 786
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 282/524 (53%), Gaps = 52/524 (9%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
+F+E+P R V N +I +Y E + ++ M V+PD TF LKAC +
Sbjct: 1 VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFVTMCSCHVKPDHYTFPCVLKACSCSGN 60
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+ +G++I A ++G + +FVG+ ++++Y KCG ++EA + ++M R+D+V W+S++ G
Sbjct: 61 IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAG 120
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
N + +A++ + M+ I D M L+ A
Sbjct: 121 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------------------------- 155
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V T+ MY K +F M + ++V+W +I + +N + +EL M++
Sbjct: 156 VSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEA 207
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC 330
GFEPD+VS+ S L AC L LGK IHGY R + NL+L ++IDMY+KCG
Sbjct: 208 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDR 267
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR +F+ M+SRD++SW +I++YG G G +A++LF +M ++ + PD F + L+A SH
Sbjct: 268 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSH 327
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+EEGR F LM YKI P +H ACMVDLL RAG+++EA K +
Sbjct: 328 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKMKEAYKFIQE----------- 376
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
C ++ GE +A+ +L G + L+SN +A +WEE +R M+ G
Sbjct: 377 -----CQWNQTREFGE-LARCILTQTSQS-GYYVLLSNIYAKAGRWEEETNIRNIMKSKG 429
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+KK PG S VEVN E+H F++ D+SH Q +I L L +M+
Sbjct: 430 LKKNPGASNVEVNREIHTFLVGDRSHPQSNEIYRELDVLVKKMK 473
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 140/284 (49%), Gaps = 33/284 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++YG + AR + +E+ R V ++NS++ Y++ +
Sbjct: 86 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQR------------------- 126
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F AL+ C + +K+ + A L ++ + M YVK F
Sbjct: 127 ---FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM---YVK--------DMFF 172
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM +K LV W+ MI + N P EAV+ Y M+ +G + D V + ++ AC D
Sbjct: 173 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSL 232
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY R+ L ++ ++ +L+DMYAK G LD A VF+NM ++V+W A+IS +
Sbjct: 233 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGF 292
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+G + L +MQ G PDS++ V+ L AC+ G L+ G+S
Sbjct: 293 SGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 336
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 249/437 (56%), Gaps = 2/437 (0%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+ +++L G + A F + D + S++ G + V Y+RM G
Sbjct: 127 TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAP 186
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+I+ACADL R G +H + + D+ VQ +L+ +YAK + +A V
Sbjct: 187 QSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKV 246
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F M + I+ W +LISG+ QNGL ++ L M GF+PDS ++VS L +C+Q+G L
Sbjct: 247 FDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGAL 306
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
G +H Y FD N+VLGTS+I+MY++CG S AR +FD M+ R++++W +I+ Y
Sbjct: 307 DFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGY 366
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G+HG+G +A+ LF +M +P++ TF ++LSA +HSGL+++GR F M Y + P
Sbjct: 367 GMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPG 426
Query: 414 EKHYACMVDLLARAGEVEEALKIVDS-MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+H CMVD+ RAG + +A + + + EPG AVW ++L C H+ F +G KVA+ V
Sbjct: 427 VEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHV 486
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
L + P++ G + ++SN +A+ + + V VR M + +KK GYS +E+N + + F M
Sbjct: 487 LSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMG 546
Query: 533 DKSHNQYEDIVYVLKKL 549
DKSH Q I L +L
Sbjct: 547 DKSHPQTNTIYRYLDEL 563
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 174/317 (54%), Gaps = 6/317 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I+L I AR+LF +P ++S++ S+ + + Y +M+
Sbjct: 128 KLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQ 187
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ TFT +KAC L L++G+EI + GYG+D++V ++++ LY K M A F
Sbjct: 188 SNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVF 247
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M ++ ++ W+S+I+G NG P+E++ + M + G D ++ L+ +C+ LG
Sbjct: 248 DAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALD 307
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +H Y+ +L+V + TSL++MY + G++ A VF +M N+VTW A+ISG+
Sbjct: 308 FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYG 367
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G +EL EM++ G P++++ V+ L ACA G + G+ + ++ + + LV
Sbjct: 368 MHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV--FSSMKEAYGLVP 425
Query: 315 GTS----VIDMYSKCGV 327
G ++DM+ + G+
Sbjct: 426 GVEHNVCMVDMFGRAGL 442
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH + I L+ + T L+ + G + A +F + + + +L+ ++ G
Sbjct: 110 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 169
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTS 317
+ T+ M G + + S + ACA + L+LGK IH + V + ++ + +
Sbjct: 170 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 229
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+I +Y+K A+ +FD M R +I+WN +I+ Y +G +E++ LF M+E+ +PD
Sbjct: 230 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 289
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+T SLLS+ S G ++ G W ++++ R G V +A ++
Sbjct: 290 SATIVSLLSSCSQLGALDFG-CWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVF 348
Query: 438 DSMSTEPGLAVWVALLSG 455
DSM E + W A++SG
Sbjct: 349 DSMK-ERNVVTWTAMISG 365
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 296/540 (54%), Gaps = 2/540 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++Y D+ +A K++ L + V N +I Y + + +G++ ++ + P+
Sbjct: 220 LISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPN 279
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT + AC +D+++ + ++ G G+++ VG++++++YVK G + EA +F
Sbjct: 280 DYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFC 339
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++LV W+++++G V NG ++A++ + ++ + G+ D L+ C++ +
Sbjct: 340 GMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGL 399
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL +HG+ ++ DV V T+L+D+YAK L A VF ++ NIV++ A++SG+
Sbjct: 400 GLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI- 458
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
+ L +++ +PDSV+ L A L GK +H Y ++ F+ N +
Sbjct: 459 GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSV 518
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G +VI MY+KCG A LF M D ISWN +I++Y +HG G +AL LF +M +
Sbjct: 519 GNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEF 578
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T S+L A S+SGL+EEG F+ M SKY I+P +H+ACMVDLL RAG + EA+
Sbjct: 579 VPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAM 638
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
++ +W L+ C H + G+ +K +L L P++ G + LVSN +A
Sbjct: 639 SFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGG 698
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
E A VR M + K G S +E++ ++H F+ DK H + ++I L L EM+
Sbjct: 699 MLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMK 758
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 244/474 (51%), Gaps = 12/474 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++ LYG N + A+ +F+E+ +R T+ ++I + + V + +M
Sbjct: 118 NLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEF 177
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ T +V L+AC SL +L GE+I ++ G+ DVFVG+S++++Y +CG + A +
Sbjct: 178 NEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVY 237
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ KD+ C + MI+ G +A+ + + G++ ++ +I AC D
Sbjct: 238 SNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVE 297
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+HG I+ ++ V ++V +Y K G L+ A F M N+V+W AL+SG+
Sbjct: 298 VLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYV 357
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+NG LE ++ G DS + L C++ L LG IHG+ V+ + ++
Sbjct: 358 KNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVS 417
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+GT++ID+Y+KC AR +F + ++++S+N I++ Y I E+A++LF Q+
Sbjct: 418 VGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLAD 476
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEVEE 432
+KPD TFA LLS + + +G+ ++ + ++ P+ + ++ + A+ G + +
Sbjct: 477 IKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGN--AVITMYAKCGSIGD 534
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLNPDDLGI 482
A ++ SM+ ++ W A++S H K + E++ K+ + PD++ I
Sbjct: 535 ACQLFYSMNYLDSIS-WNAVISAYALHGQGRKALILFEEMKKE--EFVPDEITI 585
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 189/386 (48%), Gaps = 3/386 (0%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D P + + L+ + DL +G+ I +LGY ND F G++++NLY K K+ +A
Sbjct: 73 DQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDA 132
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M ++ + W+++I G + + M G + +E ++QAC L
Sbjct: 133 QSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSL 192
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
+ G +HG+ I+R + DV V TSL+ MY++ G L A V+ N++ ++ +I
Sbjct: 193 ENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMI 252
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
S + + G + + + + G EP+ + + + AC +++ + +HG ++
Sbjct: 253 SEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCG 312
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+ +G +++ +Y K G+ A F M R+L+SW +++ Y +G+G++AL F Q+
Sbjct: 313 DEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQI 372
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+E V D FA+LL S + G +V + A ++DL A+ +
Sbjct: 373 LELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTA-LIDLYAKCRK 431
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
+ A + S+ + + + A+LSG
Sbjct: 432 LRSARLVFHSL-LDKNIVSFNAILSG 456
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IKT A + +I +Y I A +LF + ++N++I AY+ +
Sbjct: 507 IIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKA 566
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYG--NDVFVGSSML 118
L L+ +M KE+ PD T L+AC L+ G ++ +E YG ++ + M+
Sbjct: 567 LILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFND-MESKYGIKPEIEHFACMV 625
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
+L + G ++EAM S IN F+G P
Sbjct: 626 DLLGRAGYLSEAM---------------SFINRSPFSGSP 650
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 272/497 (54%), Gaps = 7/497 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
+ AC L I + VF+ +S+++LY KCG + +A F+ M +D+
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
W+S+I G N P EA+ M + + L++A S G +H
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+++ + DV V ++L+DMYA+ G +D+A VF + N V+W ALI+GFA+ G +T
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD-FNLVLGTSVIDM 321
L + EMQ GFE + S A A IG L+ GK +H + ++ + + +G +++DM
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+K G AR +FD++ +D+++WN ++ ++ +G G EA++ F +M + V + TF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
S+L+A SH GLV+EG+ +FD+M +Y ++P HY +VDLL RAG + +AL + M
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
+P AVW ALL C HK IG+ A V +L+PDD G L+ N +A +W+ A
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI----- 556
VRK M+ +G+KK P S VE+ +H F+ D +H + E+I +++ +++R
Sbjct: 490 VRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPN 549
Query: 557 SSWLQGHMEEHEEHDPL 573
+ ++ H++E E L
Sbjct: 550 TDYVLLHVDEQERQAKL 566
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 181/346 (52%), Gaps = 8/346 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+ +P R + ++ S+I Y++ + P E LGL M++ +P+
Sbjct: 105 LIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKA + +GE+I V+ + +DV+VGS++L++Y +CG+M+ A+ F+
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+++ K+ V W+++I G G + + M++ G +A + A A +G
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L V +++DMYAK+G + A VF + + ++VTW ++++ FAQ
Sbjct: 285 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ 344
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
GL + EM+ CG + ++ +S L AC+ G +K GK Y ++NL
Sbjct: 345 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ---YFDMMKEYNLEPE 401
Query: 316 ----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
+V+D+ + G+ + A +M + + W ++ S +H
Sbjct: 402 IDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 162/312 (51%), Gaps = 24/312 (7%)
Query: 158 PREAVDAYKRMKKEGIDADEVVMM-----GLIQACA---DLGDSRFGLSVHGYSIRRHLN 209
P A R + +DA E+ LI ACA L D+R ++H +
Sbjct: 40 PAAASTGIIRDTLDSVDARELAATPRLYHSLITACARYRSLDDAR---AIHAHLAGSQFA 96
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
V + SL+ +Y K G + A VF M ++ +W +LI+G+AQN + L LL M
Sbjct: 97 GSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM 156
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGV 327
F+P+ + S L A +G+ IH TV ++D+ ++ +G++++DMY++CG
Sbjct: 157 LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV-KYDWHDDVYVGSALLDMYARCGR 215
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
A A+FDQ++S++ +SWN +IA + G GE L +F +M + H T++S+ SA
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA----CMVDLLARAGEVEEALKIVDSMSTE 443
++ G +E+G++ V + I+ E+ A ++D+ A++G + +A K+ D + +
Sbjct: 276 IAGIGALEQGKW-----VHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKK 330
Query: 444 PGLAVWVALLSG 455
+ W ++L+
Sbjct: 331 -DVVTWNSMLTA 341
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 296/534 (55%), Gaps = 10/534 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG + + A+ +FE + + S+I + ++ E + + +M + +V +
Sbjct: 244 LIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVN 303
Query: 76 SSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ T L C L LK G+ I R+ ++ G D+ +G ++++ Y C K++
Sbjct: 304 AVTMISVLCCCARLGWLKEGKSVHCFILRREMD---GADLDLGPALMDFYAACWKISSCE 360
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ +V W+++I+ G EA+ + M ++G+ D + I ACA
Sbjct: 361 KLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGAS 420
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
RFG +HG+ +R D VQ SL+DMY+K G +DLA +F + +IVTW +I
Sbjct: 421 SVRFGQQIHGHVTKRGFA-DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMIC 479
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDF 310
GF+QNG++ L+L EM + + V+ +SA+ AC+ G+L GK IH V
Sbjct: 480 GFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQK 539
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+L + T+++DMY+KCG A+ +F+ M + ++SW+ +IA+YGIHG A +LF +M+
Sbjct: 540 DLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMV 599
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
E+ +KP+ TF ++LSA H+G VEEG+++F+ M Y I P +H+A +VDLL+RAG++
Sbjct: 600 ESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSM-RDYGIVPNAEHFASIVDLLSRAGDI 658
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+ A +I+ S ++W ALL+GC H + + + K++ ++ +D G + L+SN +
Sbjct: 659 DGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIY 718
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
A W E VR M G+KKVPGYS +E++ +++ F D S D +Y
Sbjct: 719 AEGGNWYESRKVRSRMEGMGLKKVPGYSSIEIDDKIYRFGAGDTSSAWQMDEIY 772
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 253/490 (51%), Gaps = 5/490 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KT L ++ +YG + ARK+F+E+ +R + +++S++ Y P E
Sbjct: 128 IVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREG 187
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + M+ E V PDS T +AC + L++ + + + D + +S++ +
Sbjct: 188 LEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVM 247
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y +C + A FE + CW+SMI+ NG EA+DA+K+M++ ++ + V M
Sbjct: 248 YGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTM 307
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
+ ++ CA LG + G SVH + +RR ++ D+ + +L+D YA + + +
Sbjct: 308 ISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIG 367
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
++V+W LIS +A+ GL + L + M G PDS SL S++ ACA ++ G+
Sbjct: 368 NSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQ 427
Query: 300 IHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
IHG+ +R + + S++DMYSKCG A +FD++ + +++WN +I + +G
Sbjct: 428 IHGHVTKRGFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGIS 487
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC 419
EAL LF +M + + TF S + A S+SG + +G+ W + +Q
Sbjct: 488 VEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGK-WIHHKLVVSGVQKDLYIDTA 546
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNP 477
+VD+ A+ G+++ A + +SM E + W A+++ H + + + K+++ + P
Sbjct: 547 LVDMYAKCGDLKTAQGVFNSM-PEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKP 605
Query: 478 DDLGIHALVS 487
+++ ++S
Sbjct: 606 NEVTFMNILS 615
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 238/452 (52%), Gaps = 20/452 (4%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR- 73
+++ Y + S+R +FE P + +I Y +V+ LY+ I++ R
Sbjct: 38 KLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRL 97
Query: 74 PDSSTF--TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ TF +KA + L +G ++ + V+ G G D +G+S+L +Y + G +++A
Sbjct: 98 TQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDAR 157
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F++++ +DLV WSS++ V NG+PRE ++ + M EG+ D V M+ + +AC +G
Sbjct: 158 KVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVG 217
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R SVHGY IR+ + D ++ SL+ MY + +L A +F+++S + W ++IS
Sbjct: 218 CLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMIS 277
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--D 309
QNG ++ +MQ E ++V+++S L CA++G+LK GKS+H + +RR
Sbjct: 278 SCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDG 337
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+L LG +++D Y+ C S L + + ++SWN +I+ Y G EEA+ LF+ M
Sbjct: 338 ADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCM 397
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA------CMVDL 423
+E + PD + AS +SA + + V G+ + T++ +A ++D+
Sbjct: 398 LEKGLMPDSFSLASSISACAGASSVRFGQ--------QIHGHVTKRGFADEFVQNSLMDM 449
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ G V+ A I D + E + W ++ G
Sbjct: 450 YSKCGFVDLAYTIFDKI-WEKSIVTWNCMICG 480
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 22/315 (6%)
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
M L ++C+ L R +H + + L+ D T L++ YA+ G L + VF+
Sbjct: 5 MPLFRSCSTL---RSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPS 61
Query: 241 INIVTWGALISGFAQNGLAGSTLELLME--------MQSCGFEPDSVSLVSALLACAQIG 292
+ +G LI + + L + L Q+C F SV + A + +G
Sbjct: 62 PDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSV-----IKAISVVG 116
Query: 293 FLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIA 351
L +G+ +HG V+ + V+GTS++ MY + G S AR +FD+++ RDL+SW+ ++A
Sbjct: 117 GLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVA 176
Query: 352 SYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Y +G E L + M+ V PD T S+ A G + + ++ K
Sbjct: 177 CYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAG 236
Query: 412 PTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKK 471
+ +V + + + A + +S+S +P A W +++S C+ + F E+
Sbjct: 237 DASLRNSLIV-MYGQCSYLRGAKGMFESVS-DPSTACWTSMISSCNQNGCF---EEAIDA 291
Query: 472 VLKLNPDDLGIHALV 486
K+ ++ ++A+
Sbjct: 292 FKKMQESEVEVNAVT 306
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 301/547 (55%), Gaps = 7/547 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + A +F+ +P R ++N++I + + L M +E VR D
Sbjct: 143 LLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLD 202
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF+ L K+ ++ K ++ G D V ++ + Y +CG + +A F+
Sbjct: 203 DGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFD 262
Query: 136 -KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ +DLV W+SM+ + + + A + M++ G + D +I AC+ +
Sbjct: 263 GAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDN-- 320
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMY--AKTGHLDLASHVFKNMSRINIVTWGALISG 252
G S+HG I+R L V + +++ MY + + ++ A +VF +M + V+W ++++G
Sbjct: 321 -GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTG 379
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
F+Q G + + L+L + M+ + D + + L +C+ + L+LG+ IH TV+ F+ N
Sbjct: 380 FSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESN 439
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +S+I MYSKCG+ AR F++ I+WN I+ +Y HG G+ AL LF QM +
Sbjct: 440 DFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRD 499
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
VK DH TF + L+A SH GLVE+GRY M S Y I P +HYAC VDL RAG ++
Sbjct: 500 KKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLD 559
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA +++SM +P VW LL C + +VA +L+L P++ + ++SN +
Sbjct: 560 EAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYG 619
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
++W+E A + + MR+ +KKVPG+S +EV E+HAFI +D+ H+ +E+I +L++L
Sbjct: 620 HLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLME 679
Query: 552 EMRAISS 558
+++ + S
Sbjct: 680 DIKWLDS 686
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 216/435 (49%), Gaps = 9/435 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF+E+ R T+N++I Y S LY M + PD+ TF LK
Sbjct: 55 ACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVAC 114
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L +G+++ V++GY V+ GS++L++Y KC ++ +A + F+ + R++ V W+++
Sbjct: 115 ACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNAL 174
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I G V G A + M++EG+ D+ L+ + + + +H I+ +
Sbjct: 175 IAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGV 234
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKN-MSRINIVTWGALISGFAQNGLAGSTLELLM 267
D V + + Y++ G L+ A VF + ++VTW ++++ F + + +L +
Sbjct: 235 QFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFL 294
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCG 326
+MQ GFEPD + + + AC+ GKS+HG ++R LV + +VI MY +
Sbjct: 295 DMQQFGFEPDIYTYTTIISACSH---KDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESS 351
Query: 327 VPSCARAL--FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
S AL F M+S+D +SWN I+ + GH E AL LF+ M +V DH F+++
Sbjct: 352 SNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAV 411
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
L + S ++ G+ ++ K + + + ++ + ++ G +E+A K + + +
Sbjct: 412 LRSCSDLATLQLGQQ-IHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDS 470
Query: 445 GLAVWVALLSGCHNH 459
+ W +++ H
Sbjct: 471 SI-TWNSIMFAYAQH 484
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 179/361 (49%), Gaps = 11/361 (3%)
Query: 101 KAVELGYGNDVFVGSSMLNLYVKC--GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
+ ++LG D++ +++L+ Y +C G + A F++M +D V W++MI+G V +G
Sbjct: 24 QTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSL 83
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
A + YK MK G+ D +++ A G VH ++ V ++L
Sbjct: 84 GSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSAL 143
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+DMYAK + A VFK + R N V+W ALI+GF G + LL M+ G D
Sbjct: 144 LDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDD 203
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD- 336
+ L + F KL +H ++ F+ + + I YS+CG A +FD
Sbjct: 204 GTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDG 263
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+ SRDL++WN ++A++ H E A LFL M + +PD T+ +++SA SH +
Sbjct: 264 AVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK---DN 320
Query: 397 GRYWFDLMVSK--YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G+ L++ + ++ P M L + + +E+AL + SM ++ ++ W ++L+
Sbjct: 321 GKSLHGLVIKRGLEQLVPICNAVIAMY-LESSSNSMEDALNVFHSMESKDRVS-WNSILT 378
Query: 455 G 455
G
Sbjct: 379 G 379
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+ + +I +Y I ARK FE+ T+NSI+ AY++ L
Sbjct: 432 VKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVAL 491
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRK-AVELGYGNDVFVGSSMLNL 120
GL+ QM + V+ D TF AL AC + ++ G + + A + G + + ++L
Sbjct: 492 GLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDL 551
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMI 149
+ + G ++EA E M D + W +++
Sbjct: 552 FGRAGYLDEAKALIESMPFDPDAMVWKTLL 581
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 292/548 (53%), Gaps = 5/548 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G I G+ D+VSA K+FE++P R T+ +I + E + L+ +MI
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYE 268
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKC---GKMNEA 130
PD T + + AC ++ L +G+++ +A+ G D VG ++N+Y KC G M A
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNG-QPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
F+++ ++ W++MI G V G EA+D ++ M + + ++ACA+
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L R G V ++++ + V SL+ MYA++G +D A F + N++++ +
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I +A+N + LEL E++ G + + S L A IG + G+ IH ++
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
N + ++I MYS+CG A +F+ M+ R++ISW II + HG +AL LF +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+E V+P+ T+ ++LSA SH GLV EG F M +++ + P +HYACMVD+L R+G
Sbjct: 569 MLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSG 628
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+ EA++ ++SM + VW L C H +G+ AK +++ P D + L+SN
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSN 688
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+A KW+EV+ +RK M++ + K G S VEV ++H F + D SH + +I L+
Sbjct: 689 LYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQN 748
Query: 549 LYLEMRAI 556
L ++++ +
Sbjct: 749 LSVKIKKL 756
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 212/460 (46%), Gaps = 61/460 (13%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
M+ + PD T+++ LK C+ +G + K + D +S+++LY KCG
Sbjct: 56 HMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCG 115
Query: 126 KMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLI 184
+ +A F+ M +DL+ WS+M++ N A+ + M + G +E
Sbjct: 116 QWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAAT 175
Query: 185 QACA-----DLGDSRFGLSVH-GYSIRRHLNLDVKVQTSLVDMYAK-TGHLDLASHVFKN 237
+AC+ +GDS FG V GY L DV V L+DM+ K G L A VF+
Sbjct: 176 RACSTAEFVSVGDSIFGFVVKTGY-----LQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M N VTW +I+ Q G AG ++L +EM G+EPD +L + ACA + L LG
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVP---SCARALFDQMQSRDLISWNVIIASY 353
+ +H +R + +G +I+MY+KC V AR +FDQ+ ++ SW +I Y
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350
Query: 354 -GIHGHGEEALSLFLQMIETMVKPDHSTFA------------------------------ 382
G+ EEAL LF MI T V P+H TF+
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSV 410
Query: 383 -----SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
SL+S + SG +++ R FD++ K I Y ++D A+ EEAL++
Sbjct: 411 NCVANSLISMYARSGRIDDARKAFDILFEKNLIS-----YNTVIDAYAKNLNSEEALELF 465
Query: 438 DSMSTE---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ + + + +LLSG + GE++ +V+K
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIK 505
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 232/467 (49%), Gaps = 10/467 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFE 59
+ +++L ++ +I+LY A +F+ + R + ++++++ ++ F
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSML 118
L + MI+ P+ F A +AC + + +G+ I+ V+ GY +DV VG ++
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211
Query: 119 NLYVKC-GKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+++VK G + A FEKM ++ V W+ MI L+ G EA+D + M G + D
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDR 271
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT---GHLDLASHV 234
+ G+I ACA++ G +H +IR L LD V L++MYAK G + A +
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331
Query: 235 FKNMSRINIVTWGALISGFAQN-GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
F + N+ +W A+I+G+ Q G L+L M P+ + S L ACA +
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
L++G+ + + V+ F + S+I MY++ G AR FD + ++LIS+N +I +
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP 412
Y + + EEAL LF ++ + + TFASLLS + G + +G V K ++
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ-IHARVIKSGLKL 510
Query: 413 TEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ ++ + +R G +E A ++ + M + + W ++++G H
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 151/308 (49%), Gaps = 9/308 (2%)
Query: 155 NGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
NG+ +A+ + M +G D ++ C G VH + L LD
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 215 QTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
SL+ +Y+K G + A+ +F+ M S ++++W A++S FA N + L ++M G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKC-GVPSC 330
+ P+ +A AC+ F+ +G SI G+ V+ ++ +G +IDM+ K G
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +F++M R+ ++W ++I G+ EA+ LFL+MI + +PD T + ++SA ++
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA---GEVEEALKIVDSMSTEPGLA 447
L+ G+ + ++ + C++++ A+ G + A KI D + + +
Sbjct: 284 MELLLLGQQLHSQAI-RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVF 341
Query: 448 VWVALLSG 455
W A+++G
Sbjct: 342 SWTAMITG 349
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 145/292 (49%), Gaps = 9/292 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K S+ +I++Y I ARK F+ L + + +YN++I AY++ + E L
Sbjct: 403 VKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEAL 462
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+N++ + + + TF L S+ + GE+I + ++ G + V ++++++Y
Sbjct: 463 ELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+CG + A FE M+ ++++ W+S+I G +G +A++ + +M +EG+ + V +
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYI 582
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS 239
++ AC+ +G G H S+ + +++ +VD+ ++G L A +M
Sbjct: 583 AVLSACSHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMP 641
Query: 240 -RINIVTWGALISGFAQNG---LAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
+ + + W + +G L ++++E + +P + L+S L A
Sbjct: 642 YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEP--HDPAAYILLSNLYA 691
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK+ L + +I++Y +I SA ++FE++ R V ++ SII +++ +
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQA 562
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKA-VELGYGNDVFVGSSMLN 119
L L+++M++E VRP+ T+ L AC + + G + ++ E G + + M++
Sbjct: 563 LELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVD 622
Query: 120 LYVKCGKMNEAMVAFEKMQRK-DLVCWSSMINGLVFNGQ 157
+ + G ++EA+ M K D + W + + +G
Sbjct: 623 ILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN 661
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 294/542 (54%), Gaps = 3/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y A K+F+ + + V +N +I+ Y+R + + + ++ M+ ++P+
Sbjct: 82 LIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGEKAIRVFINMLNAGLQPN 141
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TFT + AC + ++ GE+ + + G+ N+ +G++++N+Y K G EA F
Sbjct: 142 DYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMAREAERMFS 201
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++L+ W+++I+G +G ++AVD + + G++ D ++ ++ C++ +
Sbjct: 202 AMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLEL 261
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
GL +HG I+ V + T+LVD+YAK G+L A VF +S I ++ A+++GF +
Sbjct: 262 GLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFME 321
Query: 256 NGLAG--STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
N G + L + G +PD V+ L A L G+ H Y ++ F+ +L
Sbjct: 322 NSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADL 381
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +VI MY+KCG A +F+ M D ISWN +I++Y +HG G + L LF +MI+
Sbjct: 382 SVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKK 441
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD T S+L A ++SGL +G F++M KY I+P +HYACMVDLL RAG + E
Sbjct: 442 EFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSE 501
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+ I++ +W L++ C + G+ +K +L+L+P + G + LVSN +A
Sbjct: 502 AMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLLELSPVEAGSYILVSNMYAG 561
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E+ +E A VR M + K G S +E++ ++H F+ K H + +I L L +
Sbjct: 562 ERMLDEAAKVRTVMNDLKLSKEAGTSWIEIDDKVHHFVASGKDHPESNEIYAELDLLRDD 621
Query: 553 MR 554
MR
Sbjct: 622 MR 623
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 223/457 (48%), Gaps = 13/457 (2%)
Query: 38 LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
+R T+ S+I Y L + ++M K + T +V L+AC S G++
Sbjct: 3 VRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQ 62
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
++ G+ +V VG+S++ +Y + +A F+ M KD+ C++ MI G
Sbjct: 63 FHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGN 122
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQAC-ADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
+A+ + M G+ ++ +I AC DLG G G S + + +
Sbjct: 123 GEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEE-GEQFLGLSFKYGFLNETSIGN 181
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
++++MY K G A +F M+ N+++W ALISG+ ++G ++ ME+ CG
Sbjct: 182 AIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNF 241
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALF 335
DS L + L C++ L+LG IHG ++ + + +GT+++D+Y+KCG AR +F
Sbjct: 242 DSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVF 301
Query: 336 DQMQSRDLISWNVIIASYGIHGHG--EEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
D + S+ + S+N I+A + + E+ + LF +KPD TF+ LLS ++
Sbjct: 302 DGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHST 361
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ GR + + K + ++ + A+ G +EEA ++ + M+ ++ W A++
Sbjct: 362 LGRGRCYHAYAI-KTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSIS-WNAMI 419
Query: 454 SGCHNH----KKFSIGEKVAKKVLKLNPDDLGIHALV 486
S H K + E++ KK + PD++ I +++
Sbjct: 420 SAYALHGQGAKVLLLFEEMIKK--EFAPDEITILSIL 454
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IKT A + +I +Y I A ++F + ++N++I AY+ +VL
Sbjct: 373 IKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVL 432
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG--SSMLN 119
L+ +MIK++ PD T L+AC + G ++ +E YG + + M++
Sbjct: 433 LLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLF-NVMEPKYGIKPLLEHYACMVD 491
Query: 120 LYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMIN 150
L + G ++EAM K K + W +++N
Sbjct: 492 LLGRAGHLSEAMDIINKSPFSKSTLLWRTLVN 523
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 297/543 (54%), Gaps = 35/543 (6%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V T+N++I + E + + M+ VRPD TF AL AC L L +G E+
Sbjct: 247 VVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREM-- 304
Query: 101 KAVELGYGN---DVFVGSSMLNLYVKCGKMNEAMVAFEKMQR--KDLVCWSSMINGLVFN 155
AV L + + FV S+++++Y K+ A F+ + + L W++MI G
Sbjct: 305 HAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQA 364
Query: 156 GQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
G EA++ + RM+ E G E M G++ ACA ++HGY ++R + + V
Sbjct: 365 GMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFV 424
Query: 215 QTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ---- 270
Q +L+DMYA+ G +D+A +F + ++V+W LI+G G A +L+ EMQ
Sbjct: 425 QNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSP 484
Query: 271 --------------SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLG 315
C P++++L++ L CA + GK IHGY VR + ++ +G
Sbjct: 485 SPSSSSTTEEGEAHRC--MPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVG 542
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MV 374
++++DMY+KCG + +RA+FD++ R++I+WNV+I +YG+HG G+EA++LF +M
Sbjct: 543 SALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEA 602
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ TF + L+A SHSGLV+ G F M + ++PT +AC+VD+L RAG ++EA
Sbjct: 603 TPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAY 662
Query: 435 KIVDSMSTEPG---LAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
I+ SM EPG ++ W +LL C H+ +GE A+++ +L P + + L+ N ++
Sbjct: 663 SIITSM--EPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYS 720
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
W++ VR MR+ G+ K PG S +E++G +H F+ + SH ++ + L+
Sbjct: 721 AAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWE 780
Query: 552 EMR 554
MR
Sbjct: 781 RMR 783
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 178/377 (47%), Gaps = 24/377 (6%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVL 61
+L+A ++ +Y G + SAR++F+ +P R + +N++I Y++ E L
Sbjct: 312 ADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEAL 371
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+++M E P +T + L AC E + V+ G + FV ++++++
Sbjct: 372 ELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDM 431
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK----------- 169
Y + G+M+ A F + +D+V W+++I G V G EA M+
Sbjct: 432 YARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSST 491
Query: 170 -KEG----IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK 224
+EG + + +M L+ CA L G +HGY++R L D+ V ++LVDMYAK
Sbjct: 492 TEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAK 551
Query: 225 TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG-FEPDSVSLVS 283
G L + VF + R N++TW LI + +GL + L EM + G P+ V+ ++
Sbjct: 552 CGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIA 611
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLV--LGTSVIDMYSKCGVPSCARALFDQMQS- 340
AL AC+ G + G + R L V+D+ + G A ++ M+
Sbjct: 612 ALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPG 671
Query: 341 -RDLISWNVIIASYGIH 356
+ + +W+ ++ + +H
Sbjct: 672 EQQVSAWSSLLGACRLH 688
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 183/366 (50%), Gaps = 26/366 (7%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK 170
VG+++L Y +CG ++ A+ F + +D V ++S+I+ L Q A+DA + M
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 171 EGI-DADEVVMMGLIQACADL-GDS--RFGLSVHGYSIRRHLNLDVKVQ----TSLVDMY 222
EG D ++ ++ AC+ L GD R G H ++++R LD + +L+ MY
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF-LDEGRERFPFNALLSMY 220
Query: 223 AKTGHLDLASHVFKNMSRI------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
A+ G +D A +F+ + ++VTW +IS Q G +E+L +M S G P
Sbjct: 221 ARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRP 280
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARAL 334
D V+ SAL AC+++ L LG+ +H ++ D N + ++++DMY+ + AR +
Sbjct: 281 DGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRV 340
Query: 335 FDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDHSTFASLLSALSHS 391
FD + SR L WN +I Y G EEAL LF +M E P +T + +L A + S
Sbjct: 341 FDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARS 400
Query: 392 -GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G G+ V K + ++D+ AR GE++ A +I +M + W
Sbjct: 401 EGFA--GKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIF-AMIDPRDVVSWN 457
Query: 451 ALLSGC 456
L++GC
Sbjct: 458 TLITGC 463
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 31/283 (10%)
Query: 198 SVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR--INIVTWGALISGF 253
S+H ++RR L V +L+ YA+ G LD A +F + + V++ +LIS
Sbjct: 84 SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143
Query: 254 AQNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQI---GFLKLGKSIHGYTVR--- 306
L+ L +M + G + S +LVS LLAC+ + +LG+ H + ++
Sbjct: 144 CLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF 203
Query: 307 ------RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR------DLISWNVIIASYG 354
RF FN +++ MY++ G+ A++LF + D+++WN +I+
Sbjct: 204 LDEGRERFPFN-----ALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLV 258
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
G EA+ + M+ V+PD TFAS L A S ++ GR +++ +
Sbjct: 259 QGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANS 318
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPG--LAVWVALLSG 455
+ +VD+ A +V A ++ D M EP L +W A++ G
Sbjct: 319 FVASALVDMYAGNEKVASARRVFD-MVPEPSRQLGMWNAMICG 360
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 283/534 (52%), Gaps = 8/534 (1%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
N + A K+FE +P R T+N+++ + + + L+ +M ++ PDS T +
Sbjct: 101 NSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD-- 141
++ LK+ E + + LG V V ++ ++ Y KCG ++ A + FE + R D
Sbjct: 161 QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRT 220
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+SM G+ +A Y M +E D + L +C + G +H
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS 280
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
++I + D++ + + MY+K+ A +F M+ V+W +ISG+A+ G
Sbjct: 281 HAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDE 340
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG----YTVRRFDFNLVLGTS 317
L L M G +PD V+L+S + C + G L+ GK I Y +R N+++ +
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD--NVMICNA 398
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+IDMYSKCG AR +FD + +++W +IA Y ++G EAL LF +MI+ KP+
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
H TF ++L A +HSG +E+G +F +M Y I P HY+CMVDLL R G++EEAL+++
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
+MS +P +W ALL+ C H+ I E+ A+ + L P + ++N +A W+
Sbjct: 519 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
A +R M++ +KK PG SV++VNG+ H+F + + H + E I + L L L
Sbjct: 579 GFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSL 632
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 237/478 (49%), Gaps = 13/478 (2%)
Query: 30 RKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSL 89
R+L+ L V+ +N I + P E L L+ +M + P++ TF KAC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
D+ E + ++ + +DVFVG++ ++++VKC ++ A FE+M +D W++M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
+G +G +A ++ M+ I D V +M LIQ+ + + ++H IR ++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGALISGFAQNGLAGSTLELLM 267
+ V V + + Y K G LD A VF+ + R + +V+W ++ ++ G A L
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M F+PD + ++ +C L G+ IH + + D ++ + I MYSK
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD M SR +SW V+I+ Y G +EAL+LF MI++ KPD T SL+S
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEP 444
G +E G+ W D Y + + C ++D+ ++ G + EA I D+ + E
Sbjct: 366 GCGKFGSLETGK-WIDARADIYGCK-RDNVMICNALIDMYSKCGSIHEARDIFDN-TPEK 422
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLGIHALV---SNFFAMEQKWE 497
+ W +++G + F K+ K++ L+ P+ + A++ ++ ++E+ WE
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
++ I++Y D SAR LF+ + R ++ +I Y+ K E L L++ MIK
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND-VFVGSSMLNLYVKCGKMNEA 130
+PD T + C L+ G+ I +A G D V + ++++++Y KCG ++EA
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEA 412
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F+ K +V W++MI G NG EA+ + +M + + + ++QACA
Sbjct: 413 RDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHS 472
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWG 247
G G + + +++ N+ + + +VD+ + G L+ A + +NMS + + WG
Sbjct: 473 GSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWG 531
Query: 248 ALISG 252
AL++
Sbjct: 532 ALLNA 536
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 288/541 (53%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR-P 74
++ +Y + LF + + ++ SII ++++ E L ++ +M+ E + P
Sbjct: 183 LVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHP 242
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ F AC L L+ GE+I +V+ ++ + G S+ ++Y +C K+ A F
Sbjct: 243 NEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVF 302
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ DLV W+S+IN G EA+ M+ G+ D + + GL+ AC +
Sbjct: 303 YGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQ 362
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y ++ L+ DV V SL+ MYA+ A VF ++VTW ++++
Sbjct: 363 HGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACV 422
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN-LV 313
Q+ +L +Q D +SL + L A A++G+ ++ K +H T + N +
Sbjct: 423 QHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTM 482
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L +ID Y+KCG A LF+ M + D+ SW+ +I Y G+ +AL LF +M
Sbjct: 483 LSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNL 542
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P+H TF +L+A S GLV+EG Y++ +M ++ + PT +H +C++DLLARAG + E
Sbjct: 543 GVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTE 602
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A K VD M EP + +W LL+G H +G + A+ +L ++P + L+ N ++
Sbjct: 603 AAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSA 662
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W E A ++K MR SG+KK PG S V++ GEL FI+ED+SH + E+I +L+ + +E
Sbjct: 663 SGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGME 722
Query: 553 M 553
M
Sbjct: 723 M 723
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 225/442 (50%), Gaps = 3/442 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +YG SAR +F+E+P + ++ S+I A+++ + LGL++ M++ PD
Sbjct: 82 LITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPD 141
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
++AC L D+ +G ++ +A++ G+D+ V ++++ +Y K G + + + F
Sbjct: 142 QFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFG 201
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSR 194
+M+ KD + W S+I G G EA+ ++ M EG+ +E + AC LG
Sbjct: 202 RMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLE 261
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +H S++ L+ + SL DMYA+ L+ A VF + ++V+W ++I+ +
Sbjct: 262 YGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACS 321
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
GL + LL EM+ G PD +++ L AC ++ G+ +H Y V+ D ++
Sbjct: 322 VEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVS 381
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++ MY++C S A +F + + RD+++WN I+ + H H E LF + ++
Sbjct: 382 VCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSL 441
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
D + ++LSA + G E + + T ++D A+ G +++A
Sbjct: 442 PSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNG-LIDTYAKCGSLDDA 500
Query: 434 LKIVDSMSTEPGLAVWVALLSG 455
+K+ + M T + W +L+ G
Sbjct: 501 VKLFEMMGTNSDVFSWSSLIVG 522
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 4/357 (1%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
+ + + ++ +Y +C A + F++M K+ V W+S+I N + +A+ + M
Sbjct: 75 NTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSML 134
Query: 170 KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD 229
+ G D+ + ++ACA+LGD G VH +++ D+ VQ +LV MY+K+G +
Sbjct: 135 RSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVA 194
Query: 230 LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGF-EPDSVSLVSALLAC 288
+F M + ++WG++I+GFAQ G L++ EM + G P+ S AC
Sbjct: 195 DGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSAC 254
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+G L+ G+ IH +V+ R D N G S+ DMY++C A+ +F + + DL+SWN
Sbjct: 255 GVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWN 314
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
II + + G EA+ L +M + ++PD T LL A ++ GR +V K
Sbjct: 315 SIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLV-K 373
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSI 464
+ ++ + AR + A+ + + + + W ++L+ C H+ +
Sbjct: 374 LGLDGDVSVCNSLLSMYARCMDFSSAMDVFHE-TRDRDVVTWNSILTACVQHQHLEV 429
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + ++++Y D SA +F E R V T+NSI+ A + + V
Sbjct: 371 LVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVV 430
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L+N + + D + L A L +M +++ ++G ND + + +++
Sbjct: 431 FKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDT 490
Query: 121 YVKCGKMNEAMVAFEKM-QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
Y KCG +++A+ FE M D+ WSS+I G +G PR+A+D + RM+ G+ + V
Sbjct: 491 YAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVT 550
Query: 180 MMGLIQACADLGDSRFGLSVHG---YSI--RRHLNLDVKVQTS-LVDMYAKTGHLDLASH 233
+G++ AC SR GL G YSI H L + S ++D+ A+ G L A+
Sbjct: 551 FVGVLTAC-----SRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAK 605
Query: 234 VFKNMS-RINIVTWGALISG 252
M +IV W L++G
Sbjct: 606 FVDQMPFEPDIVMWKTLLAG 625
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 259/457 (56%), Gaps = 5/457 (1%)
Query: 27 VSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VRPDSSTFTVALK 84
V AR++F+ +P R +N+++ Y+R P + +M E+ +PDS T L
Sbjct: 111 VDARRVFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLP 170
Query: 85 ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVC 144
AC L E+ A+ G V V +++L+ Y KCG + A F+ M ++ V
Sbjct: 171 ACADARVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVS 230
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W++MI+G NG EA+ + RM +EG+D + ++ +QAC +LG VH +
Sbjct: 231 WNAMIDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLV 290
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISGFAQNGLAGSTL 263
R L +V V +L+ Y+K DLA+H F + + ++W A+I GF QNG +
Sbjct: 291 RVGLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAE 350
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
L MQ +PDS +LVS + A A I + IHGY++R + D ++ + T++IDMY
Sbjct: 351 RLFARMQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMY 410
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SKCG + AR LFD + R +I+WN +I YG HG G+ A+ LF +M T P+ +TF
Sbjct: 411 SKCGRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFL 470
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST 442
S+L+A SH+GLV+EGR +F M Y ++P +HY +VDLL RAG+V+EA + +M
Sbjct: 471 SVLAACSHAGLVDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPI 529
Query: 443 EPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
EPG++V+ A+L C HK + E+ A+K+ +L P++
Sbjct: 530 EPGISVYGAMLGACKLHKNVELAEESAQKIFELGPEE 566
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 199/394 (50%), Gaps = 12/394 (3%)
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP TFT LK C + DL G + + G ++ +++ N+Y KC + +A
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACAD- 189
F++M +D V W++++ G NG P A++A RM+ E G D + ++ ++ ACAD
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175
Query: 190 --LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
LG R VH +++R L+ V V T+++D Y K G ++ A VF M N V+W
Sbjct: 176 RVLGACR---EVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWN 232
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR- 306
A+I G+A+NG A L L M G + ++++AL AC ++G L + +H VR
Sbjct: 233 AMIDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRV 292
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSL 365
N+ + ++I YSKC A F+++ + ISWN +I + +G E+A L
Sbjct: 293 GLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERL 352
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M VKPD T S++ A++ + R W ++++ ++D+ +
Sbjct: 353 FARMQLENVKPDSFTLVSVIPAVADISDPLQAR-WIHGYSIRHQLDQDIYVLTALIDMYS 411
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+ G V A K+ DS + + + W A++ G +H
Sbjct: 412 KCGRVTIARKLFDS-ARDRHVITWNAMIHGYGSH 444
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 168/330 (50%), Gaps = 8/330 (2%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
++ L N ++ Y + +AR +F+ +P+R ++N++I Y+ + E L
Sbjct: 189 LRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGNASEAL 248
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M++E V + AL+AC L L + V +G ++V V ++++ Y
Sbjct: 249 ALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVMNALITTY 308
Query: 122 VKCGKMNEAMVAFEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
KC + + A AF ++ +K + W++MI G NG +A + RM+ E + D +
Sbjct: 309 SKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENVKPDSFTL 368
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
+ +I A AD+ D +HGYSIR L+ D+ V T+L+DMY+K G + +A +F +
Sbjct: 369 VSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLFDSARD 428
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+++TW A+I G+ +G +EL EM+ G P+ + +S L AC+ G + G+
Sbjct: 429 RHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGRK- 487
Query: 301 HGYTVRRFDFNLVLGT----SVIDMYSKCG 326
Y D+ L G +++D+ + G
Sbjct: 488 --YFASMKDYGLEPGMEHYGTLVDLLGRAG 515
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 296/559 (52%), Gaps = 21/559 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++ T A +I+ D+ AR+ F+ +P + V ++NS+I A +
Sbjct: 39 VVATGFDADVTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARA 98
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L +Y +M E V+P ++ AL +C L DL+ G+ I + G+ VFVG++++N+
Sbjct: 99 LEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNM 158
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVV 179
Y KC +++ A AFE++ KD+V W+SMI G EA++ Y+RM +E ++ ++
Sbjct: 159 YSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKIT 218
Query: 180 MMGLIQACADL---GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
++ + A L GD++ + +IR L D+ V ++LV K G LD A VF
Sbjct: 219 LVHALGAALSLRSAGDTKL---LQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFD 275
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M R N+V+W LI+ A++G +EL M G +P+ V+L+S L ACA G +
Sbjct: 276 RMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAE 335
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ H F+ + ++++MY KCG AR +FD M R+++SW ++A Y
Sbjct: 336 GRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAH 395
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
HGH EEA +F M ++P+ TF S+L SH+G+V +G F +MV + I P +
Sbjct: 396 HGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTE 455
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY C++DLL RAG +EEA +++ +M EP A W +LL C H +++AK L
Sbjct: 456 HYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDL 515
Query: 476 N-PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
P + L+SN + E++ +S ++ S++EV G +H F+ D
Sbjct: 516 ALPFASAPYVLLSNMYTDEEQ------------QSDPEEDQCSSLIEVKGRVHEFVAGDW 563
Query: 535 SHNQYEDIVYVLKKLYLEM 553
SH + E+IV L++L EM
Sbjct: 564 SHPRIEEIVAELQRLQEEM 582
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 206/403 (51%), Gaps = 7/403 (1%)
Query: 73 RPDSSTFTVALKACV---SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
RP++ FT L+AC D EI + V G+ DV V +++++ +CG +
Sbjct: 7 RPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEG 66
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A AF+++ K++V W+SMI L +G A++ Y+RM+ EG+ ++ + + +C+
Sbjct: 67 AREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSG 126
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L D G S+H + V V +LV+MY+K LDLA F+ + ++V+W ++
Sbjct: 127 LRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSM 186
Query: 250 ISGFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-R 307
I+ +Q G + LE M EP ++LV AL A + K + +R
Sbjct: 187 IAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLG 246
Query: 308 FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ +L++G++++ KCG ARA+FD+M+ R+++SW+ +IA+ HG G +A+ LF
Sbjct: 247 LEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFH 306
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
+M ++P+ T S+L A + +G + EGR VS + +V++ +
Sbjct: 307 RMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTH-ARVSGCGFEAETNVANALVNMYGKC 365
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAK 470
G + A + D+M T + W A+L+G +H +V K
Sbjct: 366 GHLGSARTVFDAM-TWRNVVSWTAMLAGYAHHGHTEEARRVFK 407
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 295/542 (54%), Gaps = 4/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I + K+F + V ++N++I ++ + + L+ +M+ E V PD
Sbjct: 212 LLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPD 271
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF KA L D+ +E+ A+ELG ++ VG++++++ KCG + EA F
Sbjct: 272 AQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFN 331
Query: 136 K--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ + W++MI+G + +G +A++ + +M + I D + A A L
Sbjct: 332 SHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCL 391
Query: 194 RFGLSVHGYSIRRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH +I+ L ++ V + ++ + YAK G L+ VF M ++++W +L++
Sbjct: 392 SLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTA 451
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
++Q +E+ M++ G P+ + S L++CA + L+ G+ +HG + D +
Sbjct: 452 YSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMD 511
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY+KCG A+ +F+++ + D +SW IIA + HG ++AL LF +M++
Sbjct: 512 KCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQ 571
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V+P+ TF +L A SH GLVEEG +F LM Y + P +HYAC+VDLL+R G +
Sbjct: 572 LGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLN 631
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A++ + M EP VW LL C H +GE A+K+L ++ + L+SN +
Sbjct: 632 DAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYI 691
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+++ +R M++ G+KK PG S + VNG LH F D+ H + + I L++L L
Sbjct: 692 ESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKL 751
Query: 552 EM 553
++
Sbjct: 752 KL 753
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 223/445 (50%), Gaps = 8/445 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y +DI +A +LF+++ R ++ +I + + + +M + + PD +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
+ L+ C+ L +++G + + V G+ + FV +++LN+Y K ++ ++ F M
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++V W++MI G N +A D + RM EG+ D +G+ +A L D V
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN---MSRINIVTWGALISGFAQN 256
GY++ ++ + V T+L+DM +K G L A +F + R N W A+ISG+ ++
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFN-APWNAMISGYLRS 353
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV-L 314
G LEL +M D + S A A + L LGK +H ++ + N V +
Sbjct: 354 GFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSI 413
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V + Y+KCG R +F++M+ RDLISW ++ +Y ++A+ +F M +
Sbjct: 414 SNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI 473
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ TF+S+L + ++ L+E G+ + + K + + + +VD+ A+ G + +A
Sbjct: 474 APNQFTFSSVLVSCANLCLLEYGQQVHGI-ICKVGLDMDKCIESALVDMYAKCGCLGDAK 532
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K+ + +S ++ W A+++G H
Sbjct: 533 KVFNRISNADTVS-WTAIIAGHAQH 556
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 202/425 (47%), Gaps = 20/425 (4%)
Query: 45 NSIIIAYSRKESPFEVLGLYN----QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+++ I +S + PF G+ ++ K D L+ CV LK + +
Sbjct: 33 SALTITHSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHG 92
Query: 101 KAVELGYGN--DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
++ + N + + + + + Y KC ++ A F++M +++ W+ +I GL NG
Sbjct: 93 FLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLF 152
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
+ + + M+ +GI D+ G++Q C L G VH + R V T+L
Sbjct: 153 LDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTAL 212
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
++MYAK ++ + VF M+ +N+V+W A+I+GF N L +L + M G PD+
Sbjct: 213 LNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA 272
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+ + A + + K + GY + D N ++GT++IDM SKCG AR++F+
Sbjct: 273 QTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS 332
Query: 338 --MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+ R WN +I+ Y G E+AL LF +M + + DH T+ S+ +A++ +
Sbjct: 333 HFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLS 392
Query: 396 EGRYWFDLMVSKYKIQP-TEKHYACMVDLLARA----GEVEEALKIVDSMSTEPGLAVWV 450
G+ V I+ E +Y + + +A A G +E+ K+ + M + L W
Sbjct: 393 LGK-----KVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME-DRDLISWT 446
Query: 451 ALLSG 455
+L++
Sbjct: 447 SLVTA 451
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 249/437 (56%), Gaps = 2/437 (0%)
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID 174
+ +++L G + A F + D + S++ G + V Y+RM G
Sbjct: 63 TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAP 122
Query: 175 ADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
+I+ACADL R G +H + + D+ VQ +L+ +YAK + +A V
Sbjct: 123 QSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKV 182
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
F M + I+ W +LISG+ QNGL ++ L M GF+PDS ++VS L +C+Q+G L
Sbjct: 183 FDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGAL 242
Query: 295 KLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
G +H Y FD N+VLGTS+I+MY++CG S AR +FD M+ R++++W +I+ Y
Sbjct: 243 DFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGY 302
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
G+HG+G +A+ LF +M +P++ TF ++LSA +HSGL+++GR F M Y + P
Sbjct: 303 GMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPG 362
Query: 414 EKHYACMVDLLARAGEVEEALKIVDS-MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
+H CMVD+ RAG + +A + + + EPG AVW ++L C H+ F +G KVA+ V
Sbjct: 363 VEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHV 422
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIME 532
L + P++ G + ++SN +A+ + + V VR M + +KK GYS +E+N + + F M
Sbjct: 423 LSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMG 482
Query: 533 DKSHNQYEDIVYVLKKL 549
DKSH Q I L +L
Sbjct: 483 DKSHPQTNTIYRYLDEL 499
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 174/317 (54%), Gaps = 6/317 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I+L I AR+LF +P ++S++ S+ + + Y +M+
Sbjct: 64 KLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQ 123
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ TFT +KAC L L++G+EI + GYG+D++V ++++ LY K M A F
Sbjct: 124 SNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVF 183
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ M ++ ++ W+S+I+G NG P+E++ + M + G D ++ L+ +C+ LG
Sbjct: 184 DAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALD 243
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
FG +H Y+ +L+V + TSL++MY + G++ A VF +M N+VTW A+ISG+
Sbjct: 244 FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYG 303
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+G +EL EM++ G P++++ V+ L ACA G + G+ + ++ + + LV
Sbjct: 304 MHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV--FSSMKEAYGLVP 361
Query: 315 G----TSVIDMYSKCGV 327
G ++DM+ + G+
Sbjct: 362 GVEHNVCMVDMFGRAGL 378
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 19/266 (7%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH + I L+ + T L+ + G + A +F + + + +L+ ++ G
Sbjct: 46 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 105
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTS 317
+ T+ M G + + S + ACA + L+LGK IH + V + ++ + +
Sbjct: 106 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 165
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+I +Y+K A+ +FD M R +I+WN +I+ Y +G +E++ LF M+E+ +PD
Sbjct: 166 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 225
Query: 378 HSTFASLLSALSHSGLVEEGRYW--------FDLMVSKYKIQPTEKHYACMVDLLARAGE 429
+T SLLS+ S G ++ G + FDL V + T ++++ R G
Sbjct: 226 SATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNV----VLGTS-----LINMYTRCGN 276
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSG 455
V +A ++ DSM E + W A++SG
Sbjct: 277 VSKAREVFDSMK-ERNVVTWTAMISG 301
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 291/538 (54%), Gaps = 20/538 (3%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI 98
R V YN++I + P + LG Y +M + V PD TF +K +M++ ++I
Sbjct: 23 RNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPCLIKGLCEVMEVFQVKKI 82
Query: 99 WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
+LG D++VGSS+++ Y+K M EA F+++ +D+V W+SM+NG G+
Sbjct: 83 HGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRF 142
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
EA+ + M +EG+ + + G++ A GD G VHG+ I+ + V V +L
Sbjct: 143 DEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVCNAL 202
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
+DMY K + A +F+ M+ +I +W +++S TL L M G + D
Sbjct: 203 IDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDL 262
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTV---------RRFDFNLVLGTSVIDMYSKCGVPS 329
V++ + L AC+ + L G+ IHGY + +NL +++DMY+KCG
Sbjct: 263 VTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMR 322
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A +F M +RD SWN++I YG+HG+G EAL +F M ++ +KP+ TF +L A S
Sbjct: 323 DAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACS 382
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
H+G + +G + M K+ + PT +HY C++D+L RAG++EEA K+ +M + VW
Sbjct: 383 HAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVW 442
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
ALL+ C + + E A+KV +LNP G + L+SN + +++EV +R TMR+
Sbjct: 443 RALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVLMSNAYVAAGRYQEVLDIRHTMRQQ 502
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISSWLQGHMEEH 567
+KK PG S +E+ ++ FI D++H + + +Y E+ +++ H+ EH
Sbjct: 503 DVKKTPGCSWIELKNGMNTFINGDRNHPE-------ARLIYPELHLLAA----HIREH 549
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 31/389 (7%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR+LF+E+P R V +NS++ Y++ E LG+ +M +E V T + L
Sbjct: 114 ARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAG 173
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
D G + +++G+ + V V ++++++Y KC + +A+ FE M KD+ W+S+
Sbjct: 174 RGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSI 233
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++ + + RM +G+ D V + ++ AC+ L G +HGY I
Sbjct: 234 LSANELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGF 293
Query: 209 NLD--------VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
D ++ +L+DMYAK G + A VF NMS + +W +I G+ +G
Sbjct: 294 VKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGN 353
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI-------HGY--TVRRFDFN 311
L + +M G +P+ ++ V LLAC+ GF+ G HG T++ +
Sbjct: 354 EALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHY--- 410
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
T VIDM + G A L M + + W ++A+ ++G+ + A ++
Sbjct: 411 ----TCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVF 466
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRY 399
E + P H L+S + V GRY
Sbjct: 467 E--LNPAHCGNYVLMS----NAYVAAGRY 489
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 171/346 (49%), Gaps = 11/346 (3%)
Query: 120 LYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+Y KC +MN+A++ + +++ ++++I+G V NG P++ + AY+ M++ G+ D+
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
LI+ ++ + +HG + L+LD+ V +SLV Y K+ + A +F
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++V W ++++G+AQ G L + EM G ++ L A G G
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +HG+ ++ FD + + ++IDMY KC A +F+ M +D+ SWN I+++ +
Sbjct: 181 RLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELC 240
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE-- 414
+ L LF +M+ V+ D T ++L A SH + GR M+ ++ E
Sbjct: 241 SDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESE 300
Query: 415 -----KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++D+ A+ G + +A + +MS A W ++ G
Sbjct: 301 NMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRD-TASWNIMIMG 345
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 10/261 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK + + +I +YG +V A ++FE + + + ++NSI+ A
Sbjct: 187 MIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGT 246
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND--------VF 112
L L+++M+ + V+ D T T L AC L L G EI + G+ D +
Sbjct: 247 LRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQ 306
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
++++++Y KCG M +A + F M +D W+ MI G +G EA+ + M K G
Sbjct: 307 TINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSG 366
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLA 231
+ +E+ +G++ AC+ G G+ G +H + ++ T ++DM + G L+ A
Sbjct: 367 LKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEA 426
Query: 232 SHVFKNMS-RINIVTWGALIS 251
+ M + N V W AL++
Sbjct: 427 YKLAVTMPIQTNPVVWRALLA 447
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 270/478 (56%), Gaps = 12/478 (2%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
+N+ I YS S + L+ +M + D PD T+ +KAC + +K G AV
Sbjct: 91 WNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAV 150
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
G G DVFV +S+++LY KCG++ A F++M +++V W++MI G EA
Sbjct: 151 RCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARK 210
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
+ M ++ + ++ G ++ C DL +R + H N V T+++D YA
Sbjct: 211 LFDEMPEKNAVSWNAIISGYVK-CGDLRSAR-----KMFDEMPHRN--VVSFTTMIDGYA 262
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
K+G + A VF+ ++V W ALISG+ QNG +++ +EM S +PD +VS
Sbjct: 263 KSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVS 322
Query: 284 ALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG---TSVIDMYSKCGVPSCARALFDQMQS 340
+ AC+Q+G L+L K + Y VR+ ++ ++IDM +KCG A LF++M
Sbjct: 323 LMSACSQMGSLELAKWVDDY-VRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPK 381
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RDLIS+ ++ IHG G +A+SLF +M+ + PD F +L+A S +GLV+EG Y+
Sbjct: 382 RDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYY 441
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHK 460
F+ M + Y I P+ HYACMVDLL RAG ++EA +++ SM EP W ALL C H
Sbjct: 442 FESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHC 501
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
+GE VA ++ +L P + G + L+SN +A ++W +V+ +R MR+ G++K+PG S
Sbjct: 502 DIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCS 559
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 198/415 (47%), Gaps = 15/415 (3%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+S+ + LKAC + L E++ + + G D F+ S L L + F
Sbjct: 25 TSSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFN 81
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ V W++ I G N V + RMK+ D+ LI+AC+ + +
Sbjct: 82 GVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKE 141
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G++ HG ++R + DV V TSL+D+Y K G + A VF M N+V+W A+I+G+A
Sbjct: 142 GVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS 201
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+L EM E ++VS + + + G L+ + + R N+V
Sbjct: 202 FSDLVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHR---NVVSF 254
Query: 316 TSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK 375
T++ID Y+K G + AR +F++ RD+++W+ +I+ Y +G EA+ +FL+M VK
Sbjct: 255 TTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVK 314
Query: 376 PDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEAL 434
PD SL+SA S G +E + W D V K I H A ++D+ A+ G ++ A
Sbjct: 315 PDEFIMVSLMSACSQMGSLELAK-WVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRAT 373
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVS 487
K+ + M L + +++ G H + ++L L PDD+ +++
Sbjct: 374 KLFEEMPKR-DLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILT 427
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 197/404 (48%), Gaps = 27/404 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LYG +I+ ARK+F+E+ R V ++ ++I Y+ E L+++M ++ +
Sbjct: 164 LIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEK----N 219
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ ++ + V DL+ +++ E+ + N V ++M++ Y K G M A FE
Sbjct: 220 AVSWNAIISGYVKCGDLRSARKMFD---EMPHRN-VVSFTTMIDGYAKSGDMASARFVFE 275
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ +D+V WS++I+G V NGQP EAV + M + DE +M+ L+ AC+ +G
Sbjct: 276 EAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLEL 335
Query: 196 GLSVHGYSIRRHLNLDV---KVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
V Y R ++DV V +L+DM AK G +D A+ +F+ M + +++++ +++ G
Sbjct: 336 AKWVDDYV--RKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQG 393
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
+ +G + L M + G PD V+ L AC++ G + G + + + D+++
Sbjct: 394 LSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG--CYYFESMKTDYSI 451
Query: 313 VLG----TSVIDMYSKCGVPSCARALFDQMQSRDLI-SWNVIIASYGIHGHGEEALSLFL 367
V ++D+ + G A L M +W ++ + +H E +
Sbjct: 452 VPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVAD 511
Query: 368 QMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ 411
Q+ E ++P ++ LL S + W D+ + + K++
Sbjct: 512 QLFE--LEPQNAGNYVLL-----SNIYAAAEQWLDVSLLRNKMR 548
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 270/510 (52%), Gaps = 39/510 (7%)
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK----MNEAMVAFEKM 137
+L+ C L LK+ I + DVF S ++ V ++ A F ++
Sbjct: 23 SLETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79
Query: 138 QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGL 197
Q +L +++MI G + P +A Y + +++G+ D + L+++C L G
Sbjct: 80 QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139
Query: 198 SVHGYSIRRHLNLDVKVQTSLVDMYA-------------------------------KTG 226
HG+ I+ DV VQ SLV MYA K G
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCG 199
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
++ A +F M N+VTW +ISG+AQN +EL +QS G + +VS +
Sbjct: 200 DVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVIS 259
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
+CA +G L+LG+ H Y V+ NL+LGT+++DMY++CG A +F+ + RD +S
Sbjct: 260 SCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLS 319
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +IA +HG+ E +L F M+E + P TF ++LSA SH GLVE G F+ M
Sbjct: 320 WTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMK 379
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIG 465
++++P +HY CMVDLL RAG++EEA + V M +P VW ALL C HK IG
Sbjct: 380 RDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIG 439
Query: 466 EKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGE 525
E+V K +++L P G + L+SN +A ++WE+V +R+ M+ G+KK PG+S++E++G
Sbjct: 440 ERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGR 499
Query: 526 LHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
+H F + D SH + + I + +++ + +RA
Sbjct: 500 VHKFTIGDSSHPEMDKIERMWEEILMRIRA 529
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 206/429 (48%), Gaps = 46/429 (10%)
Query: 1 MIKTNLSAYGNSVGRIIAL----YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKES 56
MI+T++ + R+IA G + I A ++F ++ + +N++I +S ++
Sbjct: 40 MIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKN 99
Query: 57 PFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSS 116
P + Y Q ++ + PD+ TF +K+C L + MG + ++ G+ DV+V +S
Sbjct: 100 PDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNS 159
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL-----------VFNGQPR------ 159
++++Y G A + F++M D+V W+SMI G +F+ P
Sbjct: 160 LVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTW 219
Query: 160 --------------EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+AV+ +K ++ +G+ A+E VM+ +I +CA LG G H Y ++
Sbjct: 220 STMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVK 279
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ L++ + T+LVDMYA+ G +D A VF+++ + ++W ALI+G A +G + +L+
Sbjct: 280 NGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKY 339
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYS 323
M G P ++ + L AC+ G ++ G I R R + L ++D+
Sbjct: 340 FATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLG 399
Query: 324 KCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHS 379
+ G A +M + + W ++ + IH + GE + +Q++ P HS
Sbjct: 400 RAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLL-----PQHS 454
Query: 380 TFASLLSAL 388
+ LLS +
Sbjct: 455 GYYVLLSNI 463
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 248/428 (57%), Gaps = 7/428 (1%)
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D +SS+ +G P A+ Y+ + + + +ACADL R G ++H
Sbjct: 69 DSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAIH 128
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+SI D V T+LV +Y+K G L +A +F + ++V W A+ISG+ QNGLA
Sbjct: 129 AHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAE 188
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFNLVLGTSVI 319
+ + EMQ+ PDS++ V+ L ACAQ G L LG+ + V R D ++ LG++++
Sbjct: 189 RGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALV 248
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
+MY++CGV AR FD +Q R++++W +IA YG+HGHG EA+ LF M P+H
Sbjct: 249 NMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHV 308
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV-D 438
TF ++LSA +H+GLV EGR F M Y + P +HY MVD+ RAG ++EA++ + D
Sbjct: 309 TFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISD 368
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEE 498
M EPG VW A+L C HK F++G +VA++++ L P++ H L+SN +A+ K
Sbjct: 369 YMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMHH 428
Query: 499 VAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAISS 558
V VR TM K +KK G+S++E+ G H F M +KSH Q +I + L++L + A
Sbjct: 429 VEKVRNTMIKRRLKKQIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEELIHRITA--- 485
Query: 559 WLQGHMEE 566
G+M E
Sbjct: 486 --AGYMPE 491
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 173/354 (48%), Gaps = 20/354 (5%)
Query: 44 YNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAV 103
++S+ + P + Y ++ + S TFT KAC L L+ G I ++
Sbjct: 73 FSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAIHAHSI 132
Query: 104 ELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVD 163
LG+G+D FV ++++ LY KCG++ A F+ ++ + +V W++MI+G NG +
Sbjct: 133 LLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIG 192
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA 223
YK M+ D + + + ACA G G V + +++ V + ++LV+MYA
Sbjct: 193 VYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYA 252
Query: 224 KTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVS 283
+ G +D A F + N+VTW ++I+G+ +G ++L M+ G P+ V+ V+
Sbjct: 253 RCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVA 312
Query: 284 ALLACAQIGFLKLG-------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCA-RALF 335
L ACA G + G K ++G R + S++DM+ + G+ A + +
Sbjct: 313 VLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHY-----CSMVDMFGRAGLLDEAMQFIS 367
Query: 336 DQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQMIETMV--KPDHSTFASLLS 386
D M W ++ + +H + +L +++ E ++ +P++ ++ LLS
Sbjct: 368 DYMPGEPGPEVWTAVLGACKMH----KNFNLGVEVAERLIALEPENPSYHVLLS 417
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARKLF+ + R V +N++I Y + +G+Y +M PD
Sbjct: 146 LVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVYKEMQAAKAVPD 205
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S TF L AC L +G E+ R+ V VF+GS+++N+Y +CG +++A F+
Sbjct: 206 SMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCGVVDKARRWFD 265
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+Q +++V W+SMI G +G REA+ + M+ EG + V + ++ ACA G
Sbjct: 266 ALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLSACAHAGLVME 325
Query: 196 GLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLA 231
G ++R L +V+ S+VDM+ + G LD A
Sbjct: 326 GRDAFA-CMKRVYGLVPRVEHYCSMVDMFGRAGLLDEA 362
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 275/504 (54%), Gaps = 3/504 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + + A LF +P R V ++NS+I +++ V+ L+ +M E +R D
Sbjct: 95 VVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRAD 154
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + +SL DLKM E I +++G DV V ++ + Y KCG+ A F+
Sbjct: 155 SVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFD 214
Query: 136 KMQR--KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ + K V W+SMI G Q +AV +K+M G AD ++ L+ +C
Sbjct: 215 GIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVL 274
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H + I+ + D++V +L+ MY+K G + A ++F NM V+W A+I+G
Sbjct: 275 FHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGX 334
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNL 312
A+ G + L M++ G +PD V+++S + C Q G L+LGK I Y T NL
Sbjct: 335 AEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNL 394
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
++ ++ID+Y+KCG AR LF M + L+SW +IA ++G +EAL LF QM+E
Sbjct: 395 MVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVEL 454
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+KP+H TF ++L A +H+G +E+G F+LM YKI P HY+CM DLL R G ++E
Sbjct: 455 GLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKE 514
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + +M +P + +W LLS C H+ IGE VA + +L P + ++N +A
Sbjct: 515 AFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYAS 574
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPG 516
KW+ VA +R M+ + K G
Sbjct: 575 AGKWDRVAAIRTMMKCNKAMKSSG 598
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 232/468 (49%), Gaps = 10/468 (2%)
Query: 38 LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
L V +NS I + + L L+ QM + + P++ TF KAC L++LK +
Sbjct: 16 LWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQI 75
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
+ V+ + D+FV +S++++YVKC ++ A F +M +D+ W+SMI G G
Sbjct: 76 VHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGF 135
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
V + M EGI AD V ++GL + L D + S+H + I+ ++ DV V +
Sbjct: 136 VDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNT 195
Query: 218 LVDMYAKTGHLDLASHVFKNMSR--INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
+ YAK G LA VF + + V+W ++I+G+A + +M GF
Sbjct: 196 WIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFR 255
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARAL 334
D +++S L +C Q L GK IH + ++ D ++ + ++I MYSKCG AR L
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYL 315
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLV 394
FD M + +SW +IA G +EA++LF M KPD T SL+S +G +
Sbjct: 316 FDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGAL 375
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
E G+ W D + ++ ++D+ A+ G ++ A ++ +M E L W L++
Sbjct: 376 ELGK-WIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMP-EKSLVSWTTLIA 433
Query: 455 GCHNHKKF--SIGEKVAKKVLKLNPDDLGIHALV---SNFFAMEQKWE 497
GC + +F ++G L L P+ + A++ ++ +E+ WE
Sbjct: 434 GCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWE 481
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 2/242 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
+ +I++Y DI SAR LF+ + + ++ ++I + K E + L++ M
Sbjct: 296 INTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGE 355
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD T + C L++G+ I A G +++ V ++++++Y KCG M+ A
Sbjct: 356 KPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARE 415
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F M K LV W+++I G NG+ +EA+ + +M + G+ + + + ++QAC G
Sbjct: 416 LFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGF 475
Query: 193 SRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALI 250
G + + +N + + + D+ + G L A +NM + ++ W L+
Sbjct: 476 LEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLL 535
Query: 251 SG 252
S
Sbjct: 536 SA 537
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 279/524 (53%), Gaps = 34/524 (6%)
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
Y Q ++ +RP+ TF LKA VS ++K GEE+ V G+ FV ++L YV
Sbjct: 79 YMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVA 138
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG + + F++M++ LV W+ +I V P +A++ ++ M++ G+ D V + +
Sbjct: 139 CGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTV 198
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLD-------------- 229
+ AC LGD ++H + + + +D V ++L+ Y + G LD
Sbjct: 199 VSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNI 258
Query: 230 -----------------LASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC 272
L +F++M ++V+W ++I GFA+ G L EM+
Sbjct: 259 VVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFS 318
Query: 273 GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL--VLGTSVIDMYSKCGVPSC 330
G P++++L+S L ACA G L G IH Y V + D N L +S+IDMYSKCG
Sbjct: 319 GVSPNALTLLSTLSACASHGALDTGAWIHAY-VDKNDMNRDGSLDSSLIDMYSKCGDIDK 377
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +F++ RDL +W I+ +HG GE+AL F +M E V+PD T +LSA +H
Sbjct: 378 AVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAH 437
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+++G ++F M + + P +HY MVDLL R G ++EA ++ M E +W
Sbjct: 438 AGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWG 497
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
A LS C H +GE A+++L L P D ++SN +A E KW+ G+RK ++K G
Sbjct: 498 AFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKG 557
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+KK PG S +EVNG +H F++ D SH Y +I +++K+ MR
Sbjct: 558 LKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKLMR 601
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 31/328 (9%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++T + G ++ Y + R++F+E+ G+ + II AY P +
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKA 176
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ M + + PD + + AC L DL + + + + G D FV S++++
Sbjct: 177 LELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLIST 236
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCW-------------------------------SSMI 149
Y +CG ++ A F++ K++V W +SMI
Sbjct: 237 YGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMI 296
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
G GQ +EA+ + M+ G+ + + ++ + ACA G G +H Y + +N
Sbjct: 297 GGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMN 356
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM 269
D + +SL+DMY+K G +D A +F+ +R ++ TW +++ G A +G L +M
Sbjct: 357 RDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKM 416
Query: 270 QSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ +PD V++V L ACA G L G
Sbjct: 417 KEAQVQPDDVTMVGVLSACAHAGLLDQG 444
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 12/235 (5%)
Query: 24 NDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVAL 83
N++ ++LF+ +P R V ++NS+I ++R E L +++M V P++ T L
Sbjct: 272 NNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTL 331
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
AC S L G I + D + SS++++Y KCG +++A+ FE+ R+DL
Sbjct: 332 SACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLF 391
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY- 202
W+S++ GL +G+ +A+ + +MK+ + D+V M+G++ ACA GL G+
Sbjct: 392 TWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHA-----GLLDQGWW 446
Query: 203 ---SIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALIS 251
S+ + L KV+ +VD+ + G L A + M N + WGA +S
Sbjct: 447 YFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLS 501
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 19/302 (6%)
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
M +Q L +RF +H + L + V+ + LD A
Sbjct: 1 MRACMQRFPQLSHTRFSFRLHPLTNPNKLPRIHGNTIATVEDPSAASRLDCA-------- 52
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQS--CGFEPDSVSLVSALLACAQIGFLKLG 297
N+ W +I +NGL LL MQ G P+ + + L A +K G
Sbjct: 53 --NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEG 110
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ +H VR F + + +++ Y CG+ R +FD+M+ L+ W +II +Y
Sbjct: 111 EEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCV 170
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
E+AL LF M E + PD ++++SA G + + + K I+
Sbjct: 171 TFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKA-MHCFIEKSGIEVDAFV 229
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
+ ++ G ++ A + + + VW ++ H +G K++ +
Sbjct: 230 SSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELG----KQLFQSM 284
Query: 477 PD 478
PD
Sbjct: 285 PD 286
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 287/543 (52%), Gaps = 10/543 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ + G + AR LF+ P V+ +N+I Y EV+ L+ +M DVRP+
Sbjct: 63 VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPN 122
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + LK+C + GEEI + ++ G + FV ++++++Y + A F
Sbjct: 123 CFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFV 182
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +++V W+SMI+G + + V +R+ + D V+ ++ ++GD +
Sbjct: 183 GMLERNIVAWTSMISGYILCNR----VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKA 238
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ R D ++++ YA G ++ +F+ M N+ +W LI G+A
Sbjct: 239 ARKLFDTMPYR----DTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAH 294
Query: 256 NGLAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
NG L M G P+ +LV+ L ACA++G L LGK +H Y F ++
Sbjct: 295 NGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIY 354
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++IDMYSKCG+ A +F+ M +DLI+WN +I HG G +AL+LF QM
Sbjct: 355 VGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKING 414
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KPD TF +L + +H GLVEEG +F+ MV++Y I P +HY CMVDL RAG ++ A
Sbjct: 415 EKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRA 474
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++ V M E +W ALL C +K + E +K++ L P + + L+SN +
Sbjct: 475 IEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDL 534
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W++VA ++ MR +G KK+PG S++EVN + F D+ H+Q ++I VLK L +
Sbjct: 535 GRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLL 594
Query: 554 RAI 556
R+
Sbjct: 595 RSF 597
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 178/382 (46%), Gaps = 13/382 (3%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F L++C ++ L +++ + + G+ + +V +++ +V +M A F+
Sbjct: 28 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ W+++ G N RE V + +MK + + ++++CA +G G
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 144
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I+ L + V T+L+D+Y+ + A +F M NIV W ++ISG+ +
Sbjct: 145 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGY----I 200
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSV 318
+ + L + E D V + +IG +K + + R + + ++
Sbjct: 201 LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR---DTMSWNTM 257
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPD 377
++ Y+ G LF++M R++ SWN +I Y +G E L F +M I+ +V P+
Sbjct: 258 LNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPN 317
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+T ++LSA + G ++ G+ W + + + + ++D+ ++ G +E A+++
Sbjct: 318 DATLVTVLSACARLGALDLGK-WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVF 376
Query: 438 DSMSTEPGLAVWVALLSGCHNH 459
+SM + L W +++ G H
Sbjct: 377 ESMDLKD-LITWNSMICGLATH 397
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 242/410 (59%), Gaps = 1/410 (0%)
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
FE M KDLV W+++I G NG E + + M + D + ++ A+ D
Sbjct: 257 FEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDI 316
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +HG SIR+ L+ +V V +SL+DMYAK + + VF ++ + ++W ++I+G
Sbjct: 317 SKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGC 376
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNGL L+ +M +P S S S + ACA + L LGK +HGY R FD N+
Sbjct: 377 VQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 436
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ +S++DMY+KCG AR +FD+M+ RD++SW +I +HGH +A+ LF QM
Sbjct: 437 FIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTE 496
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++P++ F ++L+A SH+GLV+E +F+ M + I P +HYA + DLL RAG +EE
Sbjct: 497 GIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEE 556
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + M P +VW LLS C HK + EKVA ++L+++P + G + L++N ++
Sbjct: 557 AYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSA 616
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
++W+E A R ++R++G++K P S +EV +++AF+ D+SH YE I
Sbjct: 617 ARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKI 666
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 209/455 (45%), Gaps = 37/455 (8%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y N + + +LF L + S+I Y+ P + LG + M+ + PD +
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F LKAC LMDL +GE + + +G D++ G++++N+Y K + F K
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK--------LRFLKKS 162
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ + S +++ + + R A + +G ++ +C F
Sbjct: 163 GRQRLGASQVLDEMT--ERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRS---REFEAQ 217
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYA-----------KTGHLDLASHVFKNMSRINIVTWG 247
V L +D K ++ +M A + +D +F+ M ++V+W
Sbjct: 218 V--------LEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWN 269
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+I+G A+NGL G TL ++ EM +PDS +L S L A+ + GK IHG ++R+
Sbjct: 270 TIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQ 329
Query: 308 -FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
D + + +S+IDMY+KC + +F + RD ISWN IIA +G +E L F
Sbjct: 330 GLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFF 389
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
QM+ +KP +F+S++ A +H + G+ +++ + +VD+ A+
Sbjct: 390 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY-ITRNGFDENIFIASSLVDMYAK 448
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNH 459
G + A +I D M + W A++ GC H H
Sbjct: 449 CGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHGH 482
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 146/267 (54%)
Query: 28 SARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACV 87
S RK+FE +P + + ++N+II +R E L + +M +++PDS T + L
Sbjct: 252 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIA 311
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+D+ G+EI ++ G +V+V SS++++Y KC ++ ++ F + +D + W+S
Sbjct: 312 ENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNS 371
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+I G V NG E + +++M I ++ ACA L G +HGY R
Sbjct: 372 IIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 431
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
+ ++ + +SLVDMYAK G++ A +F M ++V+W A+I G A +G A +EL
Sbjct: 432 FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFE 491
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFL 294
+M++ G EP+ V+ ++ L AC+ G +
Sbjct: 492 QMKTEGIEPNYVAFMAVLTACSHAGLV 518
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 103/190 (54%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
I+ L A +I +Y +V + ++F L R ++NSII + E L
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 386
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ QM+ ++P S +F+ + AC L L +G+++ G+ ++F+ SS++++Y
Sbjct: 387 KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 446
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + A F++M+ +D+V W++MI G +G +A++ +++MK EGI+ + V M
Sbjct: 447 AKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFM 506
Query: 182 GLIQACADLG 191
++ AC+ G
Sbjct: 507 AVLTACSHAG 516
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 35/371 (9%)
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +++++ F + + W S+I +G P +++ ++ M G+ D V
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYA------KTGHLDL-AS 232
+++ACA L D G S+HGY IR L+ D+ +L++MY+ K+G L AS
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 233 HVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCG---FEPDSVSLVSALLAC 288
V M+ R V +++ G G S +E SC FE
Sbjct: 171 QVLDEMTERTRSVRTASVLVG--NQGRKVSDIEAFNYDVSCRSREFE------------- 215
Query: 289 AQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
AQ+ L + R LG + D+ V S R +F+ M +DL+SWN
Sbjct: 216 AQV----LEIDYKPRSEYREMEACNLGQQIKDISHSMSVDS-VRKIFEMMPEKDLVSWNT 270
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
IIA +G E L++ +M +KPD T +S+L ++ + + +G+ + +
Sbjct: 271 IIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSI-RQ 329
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ + ++D+ A+ V ++ ++ ++ G++ W ++++GC + F G K
Sbjct: 330 GLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGIS-WNSIIAGCVQNGLFDEGLKF 388
Query: 469 AKKVL--KLNP 477
+++L K+ P
Sbjct: 389 FRQMLMAKIKP 399
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 295/542 (54%), Gaps = 4/542 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I + K+F + V ++N++I ++ + + L+ +M+ E V PD
Sbjct: 212 LLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPD 271
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ TF KA L D+ +E+ A+ELG ++ VG++++++ KCG + EA F
Sbjct: 272 AQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFN 331
Query: 136 K--MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ + W++MI+G + +G +A++ + +M + I D + A A L
Sbjct: 332 SHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCL 391
Query: 194 RFGLSVHGYSIRRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH +I+ L ++ V + ++ + YAK G L+ VF M ++++W +L++
Sbjct: 392 SLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTA 451
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFN 311
++Q +E+ M++ G P+ + S L++CA + L+ G+ +HG + D +
Sbjct: 452 YSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMD 511
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++++DMY+KCG A+ +F+++ + D +SW IIA + HG ++AL LF +M++
Sbjct: 512 KCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQ 571
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V+P+ TF +L A SH GLVEEG +F LM Y + P +HYAC+VDLL+R G +
Sbjct: 572 LGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLN 631
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+A++ + M EP VW LL C H +GE A+K+L ++ + L+SN +
Sbjct: 632 DAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYI 691
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+++ +R M++ G+KK PG S + VNG LH F D+ H + + I L++L L
Sbjct: 692 ESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKL 751
Query: 552 EM 553
++
Sbjct: 752 KL 753
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 223/445 (50%), Gaps = 8/445 (1%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
Y +DI +A +LF+++ R ++ +I + + + +M + + PD +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
+ L+ C+ L +++G + + V G+ + FV +++LN+Y K ++ ++ F M
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++V W++MI G N +A D + RM EG+ D +G+ +A L D V
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN---MSRINIVTWGALISGFAQN 256
GY++ ++ + V T+L+DM +K G L A +F + R N W A+ISG+ ++
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFN-APWNAMISGYLRS 353
Query: 257 GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV-L 314
G LEL +M D + S A A + L LGK +H ++ + N V +
Sbjct: 354 GFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSI 413
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V + Y+KCG R +F++M+ RDLISW ++ +Y ++A+ +F M +
Sbjct: 414 SNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI 473
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
P+ TF+S+L + ++ L+E G+ + + K + + + +VD+ A+ G + +A
Sbjct: 474 APNQFTFSSVLVSCANLCLLEYGQQVHGI-ICKVGLDMDKCIESALVDMYAKCGCLGDAK 532
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K+ + +S ++ W A+++G H
Sbjct: 533 KVFNRISNADTVS-WTAIIAGHAQH 556
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 202/425 (47%), Gaps = 20/425 (4%)
Query: 45 NSIIIAYSRKESPFEVLGLYN----QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
+++ I +S + PF G+ ++ K D L+ CV LK + +
Sbjct: 33 SALTITHSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHG 92
Query: 101 KAVELGYGN--DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQP 158
++ + N + + + + + Y KC ++ A F++M +++ W+ +I GL NG
Sbjct: 93 FLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLF 152
Query: 159 REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSL 218
+ + + M+ +GI D+ G++Q C L G VH + R V T+L
Sbjct: 153 LDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTAL 212
Query: 219 VDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDS 278
++MYAK ++ + VF M+ +N+V+W A+I+GF N L +L + M G PD+
Sbjct: 213 LNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA 272
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+ + A + + K + GY + D N ++GT++IDM SKCG AR++F+
Sbjct: 273 QTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS 332
Query: 338 --MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVE 395
+ R WN +I+ Y G E+AL LF +M + + DH T+ S+ +A++ +
Sbjct: 333 HFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLS 392
Query: 396 EGRYWFDLMVSKYKIQP-TEKHYACMVDLLARA----GEVEEALKIVDSMSTEPGLAVWV 450
G+ V I+ E +Y + + +A A G +E+ K+ + M + L W
Sbjct: 393 LGK-----KVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME-DRDLISWT 446
Query: 451 ALLSG 455
+L++
Sbjct: 447 SLVTA 451
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 281/512 (54%), Gaps = 6/512 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
++ Y ++ A K+F+E+P R + +N++I +S +V+GL+ M + D + P
Sbjct: 144 LVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSP 203
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ ST A L+ G+ + +G+ ND+ V + +L++Y K + A F
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLI-QACADLGD 192
+ +K+ V WS+MI G V N +EA + + +M + + V +GLI CA GD
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGD 323
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G VH Y+++ LD+ VQ +++ YAK G L A F + +++++ +LI+G
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITG 383
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV-RRFDFN 311
N + L EM++ G PD +L+ L AC+ + L G S HGY V + N
Sbjct: 384 CVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVN 443
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +++DMY+KCG A+ +FD M RD++SWN ++ +GIHG G+EALSLF M E
Sbjct: 444 TSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQE 503
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV-SKYKIQPTEKHYACMVDLLARAGEV 430
T V PD T ++LSA SHSGLV+EG+ F+ M + + P HY CM DLLARAG +
Sbjct: 504 TGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYL 563
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA V+ M EP + V LLS C +K +G +V+KK+ L + L+SN +
Sbjct: 564 DEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-VLLSNTY 622
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
+ ++WE+ A +R +K G+ K PGYS V+V
Sbjct: 623 SAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 250/482 (51%), Gaps = 20/482 (4%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVD--TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
LY N++ AR +F+E+P ++ ++ +I AY+ + + L LY +M+ VRP
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
T+ LKAC L + G+ I + D++V +++++ Y KCG++ A+ F++
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKK-EGIDADEVVMMGLIQACADLGDSRF 195
M ++D+V W++MI+G + + + + M++ +G+ + ++G+ A G R
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +VHGY R + D+ V+T ++D+YAK+ + A VF + N VTW A+I G+ +
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSA------LLACAQIGFLKLGKSIHGYTVRR-F 308
N + E+ +M D+V++V+ L+ CA+ G L G+ +H Y V+ F
Sbjct: 284 NEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+L + ++I Y+K G A F ++ +D+IS+N +I ++ EE+ LF +
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYACMVDLLARA 427
M + ++PD +T +L+A SH + G +V Y + + + ++D+ +
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKC 457
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALL--SGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
G+++ A ++ D+M + W +L G H K ++ + + +NPD++ + A+
Sbjct: 458 GKLDVAKRVFDTMHKRD-IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAI 516
Query: 486 VS 487
+S
Sbjct: 517 LS 518
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 285/529 (53%), Gaps = 3/529 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
G+ DI S +FE++P V ++N++I + L QM + P+ +
Sbjct: 251 GRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS 308
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
LKAC +G +I ++ +D ++G ++++Y K +++AM F+ M +D
Sbjct: 309 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRD 368
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
L+ W+++I+G G+ EA + ++KEG+ + + ++++ A L + VH
Sbjct: 369 LILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHA 428
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+ + D V L+D Y K L A VF+ S +I+ ++I+ +Q
Sbjct: 429 LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEG 488
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
++L MEM G EPD L S L ACA + + GK +H + ++R F + G +++
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
Y+KCG A F + R ++SW+ +I HGHG+ AL LF +M++ + P+H T
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+L A +H+GLV+E + +F+ M + I TE+HY+CM+DLL RAG++++A+++V+SM
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 668
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
+ +VW ALL HK +G+ A+K+ L P+ G H L++N +A W EVA
Sbjct: 669 PFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVA 728
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
VRK M+ S +KK P S VEV ++H FI+ DKSH ++I L +L
Sbjct: 729 KVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 777
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 230/446 (51%), Gaps = 4/446 (0%)
Query: 16 IIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++A+YGG + AR++F+E R ++N ++ AY + + + + ++ +M+ ++P
Sbjct: 141 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
F+ + AC ++ G ++ V +GY DVF ++++++YVK G+++ A V F
Sbjct: 201 TEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIF 260
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM D+V W+++I+G V NG A++ +MK G+ + ++ +++ACA G
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 320
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ I+ + + D + LVDMYAK LD A VF MS +++ W ALISG +
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 380
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
G + ++ G + +L + L + A + + +H + F F+
Sbjct: 381 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAH 440
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +ID Y KC S A +F++ S D+I+ +I + HGE A+ LF++M+
Sbjct: 441 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 500
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD +SLL+A + E+G+ ++ + + A +V A+ G +E+A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA-LVYTYAKCGSIEDA 559
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
++ S E G+ W A++ G H
Sbjct: 560 -ELAFSSLPERGVVSWSAMIGGLAQH 584
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 236/497 (47%), Gaps = 44/497 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+ Y AR++F+E+P +++S++ AYS P + ++ M E V +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF- 134
V LK CV D ++G ++ A+ G+G+DVFV ++++ +Y G M++A F
Sbjct: 103 EFALPVVLK-CVP--DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E ++ V W+ +++ V N Q +A+ + M GI E ++ AC +
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID 219
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VH +R DV +LVDMY K G +D+AS +F+ M ++V+W ALISG
Sbjct: 220 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
NG +ELL++M+S G P+ L S L ACA G LG+ IHG+ ++ D +
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++DMY+K A +FD M RDLI WN +I+ G +EA S+F + +
Sbjct: 340 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 399
Query: 374 VKPDHSTFASLLSALSH----------SGLVEEGRYWFDLMVSKYKIQPTEKHYAC---- 419
+ + +T A++L + + L E+ + FD V I + ++ C
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI---DSYWKCSCLS 456
Query: 420 -------------------MVDLLARAGEVEEALKIVDSM---STEPGLAVWVALLSGCH 457
M+ L++ E A+K+ M EP V +LL+ C
Sbjct: 457 DAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 516
Query: 458 NHKKFSIGEKVAKKVLK 474
+ + G++V ++K
Sbjct: 517 SLSAYEQGKQVHAHLIK 533
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 183/371 (49%), Gaps = 11/371 (2%)
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
+++ Y KC + A F+++ V WSS++ NG PR A+ A+ M+ EG+ +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
E + +++ + D++ G VH ++ DV V +LV MY G +D A VF
Sbjct: 103 EFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 237 NM-SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLK 295
S N V+W L+S + +N G +++ EM G +P + AC +
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID 219
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G+ +H VR ++ ++ +++DMY K G A +F++M D++SWN +I+
Sbjct: 220 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
++GH A+ L LQM + + P+ +S+L A + +G + GR M+ K +
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI-KANADSDD 338
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC----HNHKKFSIGEKVAK 470
+VD+ A+ +++A+K+ D MS L +W AL+SGC + + FSI + K
Sbjct: 339 YIGVGLVDMYAKNHFLDDAMKVFDWMSHRD-LILWNALISGCSHGGRHDEAFSIFYGLRK 397
Query: 471 KVLKLNPDDLG 481
+ L +N L
Sbjct: 398 EGLGVNRTTLA 408
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 3/363 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK N + ++ +Y + + A K+F+ + R + +N++I S E
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 388
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ + KE + + +T LK+ SL ++ A ++G+ D V + +++
Sbjct: 389 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 448
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC +++A+ FE+ D++ +SMI L A+ + M ++G++ D V+
Sbjct: 449 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+ ACA L G VH + I+R D +LV YAK G ++ A F ++
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+V+W A+I G AQ+G LEL M G P+ +++ S L AC G + K
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHG 357
F + + +ID+ + G A L + M + S W ++ + +H
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHK 688
Query: 358 HGE 360
E
Sbjct: 689 DPE 691
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 214 VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
++ L+ Y+K A VF + V+W +L++ ++ NGL S ++ M++ G
Sbjct: 39 LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+ +L +L C + +LG +H + F ++ + +++ MY G AR
Sbjct: 99 VCCNEFAL-PVVLKC--VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDAR 155
Query: 333 ALFDQMQS-RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHS 391
+FD+ S R+ +SWN ++++Y + +A+ +F +M+ + ++P F+ +++A + S
Sbjct: 156 RVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS 215
Query: 392 GLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
++ GR MV + + +VD+ + G V+ A I + M + + W A
Sbjct: 216 RNIDAGRQ-VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM-PDSDVVSWNA 273
Query: 452 LLSGC----HNHKKFSI 464
L+SGC H+H+ +
Sbjct: 274 LISGCVLNGHDHRAIEL 290
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 296/578 (51%), Gaps = 27/578 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK L A N ++ YG ++ A +LFE + + V ++N++I A ++
Sbjct: 251 IIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENA 309
Query: 61 LGLYNQMIKED--VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
LGL+ +M+K + V+P+ TF L A L L+ G EI L D + +S++
Sbjct: 310 LGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLI 369
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y KC ++ +A FE++ +D++ W+SM+ G N Q D +KRM GI+ D
Sbjct: 370 TFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSH 429
Query: 179 VMMGLIQACADLGDS------RFGLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDL 230
+ + A + DS R G +HGY +RR + + V +++ MYAK +
Sbjct: 430 SLTIIFNAASR--DSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIAD 487
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
A +FK M + +W A++ G+++N L + +++ GF D VSL L +C +
Sbjct: 488 AEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGR 547
Query: 291 IGFLKLGKSIHGYTVRRF--------DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRD 342
+ L+LGK H + F D L + ++I MYSKCG A +F +M+ +D
Sbjct: 548 LVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKD 607
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
+ SW +I HG EAL LF +M +KP+ TF +LL A +H GLV+EG Y+FD
Sbjct: 608 VFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFD 667
Query: 403 LMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMST------EPGLAVWVALLSGC 456
M + Y + P+ +HYACM+DL R+G+ + A +V+ T + L +W LL C
Sbjct: 668 SMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGAC 727
Query: 457 HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPG 516
H K+ +G + A K+L+L P+D + L++N +A WE+ VRK MR G++K G
Sbjct: 728 HASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVG 787
Query: 517 YSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S ++ H F+ D H Q ++I L +L R
Sbjct: 788 CSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCR 825
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 227/447 (50%), Gaps = 17/447 (3%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A++LF+ P R V +++++I AYSR + + GL+ +M+ E ++P+ + LK S
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK--MQRKDLVCWS 146
++ + ++ ++ G+G D + ++ + +Y +CG + +A F++ + D++ W+
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S+I +F+G E + + +M G+ A E+ ++ AC G+ ++G VHG I+
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
L + SLV Y K G+L AS +F+ +SR ++V+W A+I+ Q G + L L
Sbjct: 254 AGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312
Query: 266 LMEMQSC--GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMY 322
M +P+ V+ +S L A + + L+ G+ IH + R + + + S+I Y
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFY 372
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SKC AR +F+++ RD+ISWN ++A Y + +F +M+ + ++PD +
Sbjct: 373 SKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLT 432
Query: 383 SLLSALSH--SGLV--EEGRYWFDLMVSKYKIQPTEKHYA---CMVDLLARAGEVEEALK 435
+ +A S SGL+ G+ ++ +I P + ++ + A+ + +A K
Sbjct: 433 IIFNAASRDSSGLIYFRRGKEIHGYILR--RITPGGVSLSVSNAILKMYAKFNRIADAEK 490
Query: 436 IVDSMSTEPGLAVWVALLSGCHNHKKF 462
I M + W A++ G + KF
Sbjct: 491 IFKGMKNRDSYS-WNAMMDGYSRNAKF 516
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 129/254 (50%), Gaps = 7/254 (2%)
Query: 228 LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLA 287
L A +F N ++++W ALI+ +++ G L +M G +P+ SL S L
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 288 CAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ--MQSRDLI 344
G + L + +HG+++R F + + + I MYS+CGV A+ +FD+ + + D++
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
WN IIA+Y HG E L LF +M+ +V P T+AS+++A SG + G
Sbjct: 191 LWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGR 250
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFS 463
++ K ++ T + +V + G ++ A ++ + +S + + W A+++ +
Sbjct: 251 II-KAGLEATNL-WNSLVTFYGKCGNLQHASQLFERISRKD-VVSWNAMIAANEQRGEGE 307
Query: 464 IGEKVAKKVLKLNP 477
+ +++LK+ P
Sbjct: 308 NALGLFRRMLKVEP 321
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 287/543 (52%), Gaps = 10/543 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ + G + AR LF+ P V+ +N+I Y EV+ L+ +M DVRP+
Sbjct: 105 VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPN 164
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF + LK+C + GEEI + ++ G + FV ++++++Y + A F
Sbjct: 165 CFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFV 224
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M +++V W+SMI+G + + V +R+ + D V+ ++ ++GD +
Sbjct: 225 GMLERNIVAWTSMISGYILCNR----VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKA 280
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+ R D ++++ YA G ++ +F+ M N+ +W LI G+A
Sbjct: 281 ARKLFDTMPYR----DTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAH 336
Query: 256 NGLAGSTLELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
NG L M G P+ +LV+ L ACA++G L LGK +H Y F ++
Sbjct: 337 NGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIY 396
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+G ++IDMYSKCG+ A +F+ M +DLI+WN +I HG G +AL+LF QM
Sbjct: 397 VGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKING 456
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KPD TF +L + +H GLVEEG +F+ MV++Y I P +HY CMVDL RAG ++ A
Sbjct: 457 EKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRA 516
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
++ V M E +W ALL C +K + E +K++ L P + + L+SN +
Sbjct: 517 IEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDL 576
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+W++VA ++ MR +G KK+PG S++EVN + F D+ H+Q ++I VLK L +
Sbjct: 577 GRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLL 636
Query: 554 RAI 556
R+
Sbjct: 637 RSF 639
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 178/382 (46%), Gaps = 13/382 (3%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F L++C ++ L +++ + + G+ + +V +++ +V +M A F+
Sbjct: 70 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+ W+++ G N RE V + +MK + + ++++CA +G G
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H I+ L + V T+L+D+Y+ + A +F M NIV W ++ISG+ +
Sbjct: 187 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGY----I 242
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSV 318
+ + L + E D V + +IG +K + + R + + ++
Sbjct: 243 LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR---DTMSWNTM 299
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPD 377
++ Y+ G LF++M R++ SWN +I Y +G E L F +M I+ +V P+
Sbjct: 300 LNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPN 359
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
+T ++LSA + G ++ G+ W + + + + ++D+ ++ G +E A+++
Sbjct: 360 DATLVTVLSACARLGALDLGK-WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVF 418
Query: 438 DSMSTEPGLAVWVALLSGCHNH 459
+SM + L W +++ G H
Sbjct: 419 ESMDLKD-LITWNSMICGLATH 439
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 275/482 (57%), Gaps = 5/482 (1%)
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK 136
S A+ C S+ + K+V +G F+G +++ YV+ G +A+ F++
Sbjct: 42 SALITAISTCSSISYCRALHCRVIKSVNYNHG---FIGDQLVSSYVELGCTKDALELFDE 98
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLGDSRF 195
+ KDLV W+S+I+G + RM+ E G+ +EV ++ ++ ACA +G+
Sbjct: 99 LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG +++ + L+VKV SL+++Y K G L+ A +F+ MS ++V+W ++++
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVH 218
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
GLA + + M+ G D ++VS LLAC +G KL +++HGY + D NL +
Sbjct: 219 MGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAI 278
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
T+++D+Y+K G S + +F M + D ++W +++SY +HG G EA+ F M+ V
Sbjct: 279 ATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGV 338
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH TF LLSA SHSGLVEEG+ +F +M Y ++ +HY+CMVDLL R+G + +A
Sbjct: 339 VPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAY 398
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K++ SM EP VW AL+ C +G++VA+++ L+P D + +SN ++
Sbjct: 399 KLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAG 458
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+W + + VR M++ + + PG S +E ++H F+M D+SH E I L++L + R
Sbjct: 459 QWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNR 518
Query: 555 AI 556
+
Sbjct: 519 EV 520
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 204/410 (49%), Gaps = 37/410 (9%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
A +LF+ELP + + ++NS+I +SR+ LGL +M E ++P+ T + AC
Sbjct: 92 ALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACA 151
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ +L +G+ I AV+ G +V V +S++NLY KCG + A FE M + LV W+S
Sbjct: 152 GVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNS 211
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
M+ V G + + + M++ GI++D+ ++ L+ AC +LG + +VHGY +
Sbjct: 212 MVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGG 271
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+ ++ + T+L+D+YAK G L + VF M + V W A++S +A +G +E
Sbjct: 272 LDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFE 331
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGV 327
M G PD V+ L AC+ G ++ GK+ Y ++F G + + C V
Sbjct: 332 LMVREGVVPDHVTFTHLLSACSHSGLVEEGKN---YFKIMYEF---YGVELRVEHYSCMV 385
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
DL+ G GH +A L M ++P+ + +L+ A
Sbjct: 386 --------------DLL---------GRSGHLNDAYKLIKSM---PMEPNSGVWGALIGA 419
Query: 388 LSHSGLVEEGRYWFDLMVSKYKIQPTE-KHYACMVDLLARAGEVEEALKI 436
G +E G+ ++ + + P++ ++Y + ++ + AG+ +A K+
Sbjct: 420 CRVRGNIELGK---EVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKV 466
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 125/251 (49%), Gaps = 10/251 (3%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LYG + +A LFE + ++ + ++NS++ + + +G + M + +
Sbjct: 178 VNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGI 237
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
D +T L AC +L K+ E + + G ++ + +++L+LY K G ++++
Sbjct: 238 NSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCK 297
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA---- 188
F M D V W++M++ +G+ REA++ ++ M +EG+ D V L+ AC+
Sbjct: 298 VFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGL 357
Query: 189 -DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTW 246
+ G + F + Y + L V+ + +VD+ ++GHL+ A + K+M N W
Sbjct: 358 VEEGKNYFKIMYEFYGVE----LRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVW 413
Query: 247 GALISGFAQNG 257
GALI G
Sbjct: 414 GALIGACRVRG 424
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 256/485 (52%), Gaps = 6/485 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML--NLYVKCGKMNEAMV 132
D + A+K C + DLK I V D F+ S ++ + G + A
Sbjct: 6 DQGSLVAAIKRCTRVGDLK---AIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHR 62
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +L W+++I G + P A+ Y+ M GI + +++AC L
Sbjct: 63 IFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLR 122
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G +H ++ L+ + + L+ +YA G +D A +F M + +W ++SG
Sbjct: 123 LCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSG 182
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+AQNG A L+L EMQ+ D+ +L S + C +G L LGK +H Y + +
Sbjct: 183 YAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKID 242
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+VLGT+++ MYSKCG A +F M RD+ +W+ +IA Y IHGHGE+AL LF M
Sbjct: 243 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKR 302
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ P+ TF S+LSA SHSGLVE+G F+ M ++YKI P KHY CMVDL RAG V
Sbjct: 303 SKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG 362
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A K + +M EP + +W LL C H +GE +++K+LKL+P + LVSN +A
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYA 422
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W V VR M+ KK G+S +E+N +H FIM D+SH + E I +L ++
Sbjct: 423 SLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMAR 482
Query: 552 EMRAI 556
+++ +
Sbjct: 483 KLKQV 487
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 170/338 (50%), Gaps = 3/338 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A ++F + +N+II YS +SP + LY M + P+S TF LKA
Sbjct: 57 VAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKA 116
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C L+ L G+E+ + V++G + + + ++ LY CG M+ A V F++M D W
Sbjct: 117 CCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASW 176
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
S+M++G NGQ EA+ ++ M+ E + +D + ++ C DLG G VH Y +
Sbjct: 177 STMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDK 236
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ +DV + T+LV MY+K G LD A VF+ M+ ++ W +I+G+A +G L+L
Sbjct: 237 EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQL 296
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG--YTVRRFDFNLVLGTSVIDMYS 323
M+ P+ V+ S L AC+ G ++ G I +T + + ++D++
Sbjct: 297 FDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFC 356
Query: 324 KCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGE 360
+ G+ A M +++ W ++ + HG+ +
Sbjct: 357 RAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKD 394
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 12/264 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L V +I LY + A +F+E+P ++++++ Y++ E
Sbjct: 133 IVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEA 192
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M E+V D+ T + C L L +G+ + + G DV +G++++ +
Sbjct: 193 LKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGM 252
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++ A+ F+ M +D+ WS+MI G +G +A+ + MK+ + V
Sbjct: 253 YSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTF 312
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS------LVDMYAKTGHLDLASHV 234
++ AC S GL G+ I + + K+ +VD++ + G + A
Sbjct: 313 TSVLSAC-----SHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKF 367
Query: 235 FKNMS-RINIVTWGALISGFAQNG 257
+ M N+V W L+ +G
Sbjct: 368 IQTMPIEPNVVLWRTLLGACKTHG 391
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 273/494 (55%), Gaps = 15/494 (3%)
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVEL---------GYGNDVFVGSSMLNLYVK 123
R D + T +K CV G I R VE G G +FV +S++++Y K
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRH-VEAHGQLSHYSGGAGGGIFVSNSLVSMYAK 127
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLV-FNGQPREAVDAYKRMKKEGIDADEVVMMG 182
G +++A+ F++M +++V W++++ L +G+ EA+ M ++G+ +
Sbjct: 128 FGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSS 187
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ AC G ++H +++ L+ DV V++SL+D Y K G LD VF M +
Sbjct: 188 VLGACGTPG---VLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRD 244
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V W ++I+GFAQ+G +EL M M+ GF + +L S L AC + L+ G+ +H
Sbjct: 245 LVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHA 304
Query: 303 YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ V +++ +L+L +++DMY KCG A ALF +M RD+ISW+ +I+ +G EA
Sbjct: 305 H-VLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEA 363
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L +F M V P+ T +L A SH+GLVE+G Y+F M + IQP +H+ CMVD
Sbjct: 364 LRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVD 423
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGI 482
LL RAG+++EA++ + M+ EP +W LL C HK ++ A+++LKL PDD G
Sbjct: 424 LLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGA 483
Query: 483 HALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
L+SN +A ++W + K MR GMKK PG S +E+ +H FI D SH + I
Sbjct: 484 RVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTI 543
Query: 543 VYVLKKLYLEMRAI 556
V L +L + A+
Sbjct: 544 VQELNRLIGRISAL 557
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 124/242 (51%), Gaps = 14/242 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y D+ R++F+E+ R + +NSII +++ + L+ +M +
Sbjct: 220 LIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSAN 279
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T T L+AC ++ L+ G ++ A L Y D+ + +++L++Y KCG + +A F
Sbjct: 280 QGTLTSVLRACTGMVMLEAGRQV--HAHVLKYERDLILHNALLDMYCKCGSLEDAEALFH 337
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M ++D++ WS+MI+GL NG+ EA+ + MK EG+ + + M+G++ AC S
Sbjct: 338 RMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFAC-----SHA 392
Query: 196 GLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
GL G+ R + +Q +VD+ + G LD A ++M+ + V W
Sbjct: 393 GLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRT 452
Query: 249 LI 250
L+
Sbjct: 453 LL 454
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 304/572 (53%), Gaps = 9/572 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK+ +A + II+ Y +I A K+F E R ++N++I + + L
Sbjct: 26 IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
M + D +F LK + +++G+++ V++GY +VF GS++L++Y
Sbjct: 86 EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC ++ +A F+ + ++ V W+++I+G G A M+ EG++ D+
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK---NM 238
L+ D + VH ++ L D V +++ Y++ G ++ A VF
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++ V+W ++++GF+Q+GL+ L+ M+S D + + L +C+ + L+LG+
Sbjct: 266 RDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 325
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H ++ F+ N + +S+I MYSKCGV AR FD I+WN +I Y HG
Sbjct: 326 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 385
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
G+ AL LF M + VK DH TF ++L+A SH GLVEEG + M S Y I P +HY
Sbjct: 386 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 445
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
ACM+DLL RAG ++EA ++++M EP VW LL C + +VA +L+L P
Sbjct: 446 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 505
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
++ + L+S+ F ++W E A +++ M++ G+KKVPG+S +EV E+ +F ED+SH
Sbjct: 506 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHP 565
Query: 538 QYEDIVYVLKKLYLEMR-----AISSWLQGHM 564
E+I L +L E+R A S +LQ ++
Sbjct: 566 NCEEIYLRLGELMEEIRRLDYVANSEFLQNNL 597
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 181/368 (49%), Gaps = 6/368 (1%)
Query: 102 AVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREA 161
A++ G ++ +++++ Y KCG++ A F + ++D V W++MI G V G A
Sbjct: 25 AIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETA 84
Query: 162 VDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDM 221
++ K MK+ G D +++ A +G G VH ++ +V ++L+DM
Sbjct: 85 LEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDM 144
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
YAK ++ A VFK+++ N VTW ALISG+AQ G G+ LL M+ G E D +
Sbjct: 145 YAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTF 204
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD-QMQ 339
L KL +H V+ + + ++I YS+CG A +FD ++
Sbjct: 205 APLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIE 264
Query: 340 SRDL--ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+RDL +SWN I+ + G E+AL F M V DH F+++L + S ++ G
Sbjct: 265 TRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 324
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ ++V K +P + ++ + ++ G +E+A K D+ + +A W +L+ G
Sbjct: 325 QQ-VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIA-WNSLIFGYA 382
Query: 458 NHKKFSIG 465
H + I
Sbjct: 383 QHGRGKIA 390
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 47/349 (13%)
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H +I+ + +++ YAK G + +AS +F S+ + V+W +I+GF G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 260 GSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
+ LE L M+ GF D S S L A +G++++G+ +H V+ ++ N+ G+++
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+DMY+KC A +F + R+ ++WN +I+ Y G A L M V+ D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 379 STFA-----------------------------------SLLSALSHSGLVEEGRYWFDL 403
TFA ++++A S G +E+ FD
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 404 MVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA---VWVALLSGCHNHK 460
+ + + ++ +++G E+ALK ++M ++ + + A+L C +
Sbjct: 262 AIETRDLDHVS--WNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 319
Query: 461 KFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
+G++V VLK + G + S+ M K GV + RKS
Sbjct: 320 TLQLGQQVHVLVLKSGFEPNGF--VASSLIFMYSK----CGVIEDARKS 362
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ G +I +Y I ARK F+ P +NS+I Y++
Sbjct: 331 VLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIA 390
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR--KAVELGYGNDVFVG--SS 116
L L+ M V+ D TF L AC + + EE W K++E YG + +
Sbjct: 391 LDLFFLMKDRRVKLDHITFVAVLTAC---SHIGLVEEGWSFLKSMESDYGIPPRMEHYAC 447
Query: 117 MLNLYVKCGKMNEAMVAFEKMQ-RKDLVCWSSMI 149
M++L + G+++EA E M D + W +++
Sbjct: 448 MIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 481
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 265/473 (56%), Gaps = 2/473 (0%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++ P + + AC +L+ +I + D F+ +S++++Y KC + +A
Sbjct: 46 ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++M+RKD+V W+S+I G N P EA+ M K + L++A
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
DS G +H +++ + DV V ++L+DMYA+ G +D+A+ VF + N V+W ALI
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
SGFA+ G S L EM GFE + S + A++G L+ GK +H + ++ R
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQK 285
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
+G +++DMY+K G AR +FD++ ++DL++WN ++ ++ +G G+EA+S F +M
Sbjct: 286 LTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
++ V + TF +L+A SH GLV+EG+ +F++M +Y ++P HY +V LL RAG
Sbjct: 346 RKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAGL 404
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
+ AL + M EP AVW ALL+ C HK +G+ A V +L+PDD G L+ N
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNI 464
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+A +W+ A VR M+ +G+KK P S VE+ +H F+ D +H Q E+I
Sbjct: 465 YASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEI 517
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 152/283 (53%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y ++ AR +F+++ + + ++ S+I Y++ + P E +GL M+K +P+
Sbjct: 92 LIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPN 151
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF LKA + D G +I AV+ G+ DV+VGS++L++Y +CGKM+ A F+
Sbjct: 152 GFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFD 211
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+ K+ V W+++I+G G A+ + M + G +A + + A LG
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQ 271
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH + I+ L V +L+DMYAK+G + A VF + ++VTW ++++ FAQ
Sbjct: 272 GKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQ 331
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
GL + EM+ G + ++ + L AC+ G +K GK
Sbjct: 332 YGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGK 374
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/620 (29%), Positives = 308/620 (49%), Gaps = 75/620 (12%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIK 69
S ++A Y + + +A F+ +P DT +N++I AY+R + ++ ++
Sbjct: 90 SATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149
Query: 70 E-DVRPDSSTFTV------------------------------ALKACVSLMDLKMGEEI 98
+RPD +FT AL C +L+ L M E
Sbjct: 150 SGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCES 209
Query: 99 ------WRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGL 152
RK ++ D ++M+ YV+ G + A FE++ K V W++MI+G
Sbjct: 210 PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGY 269
Query: 153 VFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-- 210
V +G EA + ++RM E + DE ++ ACA++G G SVHG IR N
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVP 329
Query: 211 --DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN------------ 256
+ V +LV Y+K G++ +A +F NM+ ++V+W ++SG+ ++
Sbjct: 330 EAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEE 389
Query: 257 -------------------GLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
G A L+L +M+S +P + A+ AC ++G LK G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG 449
Query: 298 KSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +HG+ V+ F+ + G ++I MY++CG A +F M + D +SWN +I++ G H
Sbjct: 450 KQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQH 509
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
GHG EAL LF +M+ + PD +F ++L+A +HSGLV+EG +F+ M + I P E H
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDH 569
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLN 476
Y ++DLL RAG + EA ++ +M EP ++W A+LSGC +G A ++ K+
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629
Query: 477 PDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSH 536
P G + L+SN ++ W + A VRK MR G+KK PG S +E ++H F++ D H
Sbjct: 630 PQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKH 689
Query: 537 NQYEDIVYVLKKLYLEMRAI 556
+ ++ L+ + +MR +
Sbjct: 690 PEAHEVYKFLEMVGAKMRKL 709
>gi|326504782|dbj|BAK06682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 686
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 271/456 (59%), Gaps = 13/456 (2%)
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPRE 160
+ L G+ F+ +S++ +Y CG A F+ M+ +D+V W+S+I+ LV +G P +
Sbjct: 215 LRLTDGDTRFLHNSLIPMYFSCGDAGRARRVFDGMRDCERDVVSWTSLISRLVQSGSPLQ 274
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ + M + D V+++ +++A +L D S H ++ + + V T+L
Sbjct: 275 ALRLFAAMMCCDVRPDFVLLVTVLKAYMELDDLPGAQSAHSLVVKGGFDDEQDVVTTLTA 334
Query: 221 MYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLELLMEMQ--SCGFEP 276
MYAK G + A +F + R+N++ W A+ISG+++NGLA + L +MQ + P
Sbjct: 335 MYAKFGCIVAARALFDRIPPPRVNVILWNAMISGYSKNGLASEAVHLFKQMQVFARSMSP 394
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARAL 334
DSV+L S ++ACAQ+G +L + Y VRR + ++++ T++IDMY+K G + AR +
Sbjct: 395 DSVTLRSVIMACAQLGSTELAVWMEDY-VRRSECREDVLVNTALIDMYAKSGSIAHARRV 453
Query: 335 FDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
F+QM Q RD++ W+ +I+ YG HGH EA+ LF M VKP+ TF LLSA +H+G
Sbjct: 454 FEQMHAQERDVVVWSALISGYGAHGHLAEAVGLFEDMKLAGVKPNDVTFLGLLSACNHAG 513
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
VE+G ++F M +KI+P +HYAC+VDLLARAG+++ A + + M +P ++VW AL
Sbjct: 514 AVEKGWFYFHSMKPDHKIEPRHQHYACVVDLLARAGQLDRAYRFILDMPIKPEMSVWGAL 573
Query: 453 LSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
L GC H H ++ E+ A+ + +L + G + ++N +A W VAGVR TMR+ G
Sbjct: 574 LHGCKMHEHSNMAMAERAAQHIFELEQSNAGHYVQLANMYASAGMWSHVAGVRATMRERG 633
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+ K G S +EV+GE H F D SH + +I +L
Sbjct: 634 VTKATGCSSIEVDGETHNFHAWDHSHPRAAEIFALL 669
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 21/365 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I +Y D AR++F+ + R V ++ S+I + SP + L L+ M+ DVR
Sbjct: 229 LIPMYFSCGDAGRARRVFDGMRDCERDVVSWTSLISRLVQSGSPLQALRLFAAMMCCDVR 288
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD LKA + L DL + V+ G+ ++ V +++ +Y K G + A
Sbjct: 289 PDFVLLVTVLKAYMELDDLPGAQSAHSLVVKGGFDDEQDVVTTLTAMYAKFGCIVAARAL 348
Query: 134 FEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMK--KEGIDADEVVMMGLIQACAD 189
F+++ R +++ W++MI+G NG EAV +K+M+ + D V + +I ACA
Sbjct: 349 FDRIPPPRVNVILWNAMISGYSKNGLASEAVHLFKQMQVFARSMSPDSVTLRSVIMACAQ 408
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWG 247
LG + + + Y R DV V T+L+DMYAK+G + A VF+ M ++V W
Sbjct: 409 LGSTELAVWMEDYVRRSECREDVLVNTALIDMYAKSGSIAHARRVFEQMHAQERDVVVWS 468
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSI 300
ALISG+ +G + L +M+ G +P+ V+ + L AC G ++ G K
Sbjct: 469 ALISGYGAHGHLAEAVGLFEDMKLAGVKPNDVTFLGLLSACNHAGAVEKGWFYFHSMKPD 528
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H R + V+D+ ++ G + R + D ++ W ++ +H H
Sbjct: 529 HKIEPRHQHY-----ACVVDLLARAGQLDRAYRFILDMPIKPEMSVWGALLHGCKMHEHS 583
Query: 360 EEALS 364
A++
Sbjct: 584 NMAMA 588
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPF 58
++K + V + A+Y IV+AR LF+ +P V+ +N++I YS+
Sbjct: 317 VVKGGFDDEQDVVTTLTAMYAKFGCIVAARALFDRIPPPRVNVILWNAMISGYSKNGLAS 376
Query: 59 EVLGLYNQM--IKEDVRPDSSTFTVALKACVSL--MDLKMGEEIWRKAVELGYGNDVFVG 114
E + L+ QM + PDS T + AC L +L + E + + E DV V
Sbjct: 377 EAVHLFKQMQVFARSMSPDSVTLRSVIMACAQLGSTELAVWMEDYVRRSEC--REDVLVN 434
Query: 115 SSMLNLYVKCGKMNEAMVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
++++++Y K G + A FE+M Q +D+V WS++I+G +G EAV ++ MK G
Sbjct: 435 TALIDMYAKSGSIAHARRVFEQMHAQERDVVVWSALISGYGAHGHLAEAVGLFEDMKLAG 494
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDL 230
+ ++V +GL+ AC G G + +S++ ++ + Q +VD+ A+ G LD
Sbjct: 495 VKPNDVTFLGLLSACNHAGAVEKGW-FYFHSMKPDHKIEPRHQHYACVVDLLARAGQLDR 553
Query: 231 ASHVFKNMS-RINIVTWGALISG 252
A +M + + WGAL+ G
Sbjct: 554 AYRFILDMPIKPEMSVWGALLHG 576
>gi|326528345|dbj|BAJ93354.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 271/456 (59%), Gaps = 13/456 (2%)
Query: 103 VELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMINGLVFNGQPRE 160
+ L G+ F+ +S++ +Y CG A F+ M+ +D+V W+S+I+ LV +G P +
Sbjct: 138 LRLTDGDTRFLHNSLIPMYFSCGDAGRARRVFDGMRDCERDVVSWTSLISRLVQSGSPLQ 197
Query: 161 AVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
A+ + M + D V+++ +++A +L D S H ++ + + V T+L
Sbjct: 198 ALRLFAAMMCCDVRPDFVLLVTVLKAYMELDDLPGAQSAHSLVVKGGFDDEQDVVTTLTA 257
Query: 221 MYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLELLMEMQ--SCGFEP 276
MYAK G + A +F + R+N++ W A+ISG+++NGLA + L +MQ + P
Sbjct: 258 MYAKFGCIVAARALFDRIPPPRVNVILWNAMISGYSKNGLASEAVHLFKQMQVFARSMSP 317
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARAL 334
DSV+L S ++ACAQ+G +L + Y VRR + ++++ T++IDMY+K G + AR +
Sbjct: 318 DSVTLRSVIMACAQLGSTELAVWMEDY-VRRSECREDVLVNTALIDMYAKSGSIAHARRV 376
Query: 335 FDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
F+QM Q RD++ W+ +I+ YG HGH EA+ LF M VKP+ TF LLSA +H+G
Sbjct: 377 FEQMHAQERDVVVWSALISGYGAHGHLAEAVGLFEDMKLAGVKPNDVTFLGLLSACNHAG 436
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
VE+G ++F M +KI+P +HYAC+VDLLARAG+++ A + + M +P ++VW AL
Sbjct: 437 AVEKGWFYFHSMKPDHKIEPRHQHYACVVDLLARAGQLDRAYRFILDMPIKPEMSVWGAL 496
Query: 453 LSGC--HNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
L GC H H ++ E+ A+ + +L + G + ++N +A W VAGVR TMR+ G
Sbjct: 497 LHGCKVHEHSNMAMAERAAQHIFELEQSNAGHYVQLANMYASAGMWSHVAGVRATMRERG 556
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+ K G S +EV+GE H F D SH + +I +L
Sbjct: 557 VTKATGCSSIEVDGETHNFHAWDHSHPRAAEIFALL 592
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 21/365 (5%)
Query: 16 IIALYGGKNDIVSARKLFEELP--LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I +Y D AR++F+ + R V ++ S+I + SP + L L+ M+ DVR
Sbjct: 152 LIPMYFSCGDAGRARRVFDGMRDCERDVVSWTSLISRLVQSGSPLQALRLFAAMMCCDVR 211
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PD LKA + L DL + V+ G+ ++ V +++ +Y K G + A
Sbjct: 212 PDFVLLVTVLKAYMELDDLPGAQSAHSLVVKGGFDDEQDVVTTLTAMYAKFGCIVAARAL 271
Query: 134 FEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMK--KEGIDADEVVMMGLIQACAD 189
F+++ R +++ W++MI+G NG EAV +K+M+ + D V + +I ACA
Sbjct: 272 FDRIPPPRVNVILWNAMISGYSKNGLASEAVHLFKQMQVFARSMSPDSVTLRSVIMACAQ 331
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWG 247
LG + + + Y R DV V T+L+DMYAK+G + A VF+ M ++V W
Sbjct: 332 LGSTELAVWMEDYVRRSECREDVLVNTALIDMYAKSGSIAHARRVFEQMHAQERDVVVWS 391
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSI 300
ALISG+ +G + L +M+ G +P+ V+ + L AC G ++ G K
Sbjct: 392 ALISGYGAHGHLAEAVGLFEDMKLAGVKPNDVTFLGLLSACNHAGAVEKGWFYFHSMKPD 451
Query: 301 HGYTVRRFDFNLVLGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHG 359
H R + V+D+ ++ G + R + D ++ W ++ +H H
Sbjct: 452 HKIEPRHQHY-----ACVVDLLARAGQLDRAYRFILDMPIKPEMSVWGALLHGCKVHEHS 506
Query: 360 EEALS 364
A++
Sbjct: 507 NMAMA 511
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPF 58
++K + V + A+Y IV+AR LF+ +P V+ +N++I YS+
Sbjct: 240 VVKGGFDDEQDVVTTLTAMYAKFGCIVAARALFDRIPPPRVNVILWNAMISGYSKNGLAS 299
Query: 59 EVLGLYNQM--IKEDVRPDSSTFTVALKACVSL--MDLKMGEEIWRKAVELGYGNDVFVG 114
E + L+ QM + PDS T + AC L +L + E + + E DV V
Sbjct: 300 EAVHLFKQMQVFARSMSPDSVTLRSVIMACAQLGSTELAVWMEDYVRRSEC--REDVLVN 357
Query: 115 SSMLNLYVKCGKMNEAMVAFEKM--QRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
++++++Y K G + A FE+M Q +D+V WS++I+G +G EAV ++ MK G
Sbjct: 358 TALIDMYAKSGSIAHARRVFEQMHAQERDVVVWSALISGYGAHGHLAEAVGLFEDMKLAG 417
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDL 230
+ ++V +GL+ AC G G + +S++ ++ + Q +VD+ A+ G LD
Sbjct: 418 VKPNDVTFLGLLSACNHAGAVEKGW-FYFHSMKPDHKIEPRHQHYACVVDLLARAGQLDR 476
Query: 231 ASHVFKNMS-RINIVTWGALISG 252
A +M + + WGAL+ G
Sbjct: 477 AYRFILDMPIKPEMSVWGALLHG 499
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 289/545 (53%), Gaps = 9/545 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + A ++F+ +P R V ++ ++++ + E L L+ +M P+
Sbjct: 45 LIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPN 104
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGY-GNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + LKAC + G +I V G+ G+DV V +S++ +Y K +A F
Sbjct: 105 EFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVF 161
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGID-ADEVVMMGLIQACADLGDS 193
+ + ++L W+SMI+G GQ R+++ ++ M++ + DE L++AC+ LG +
Sbjct: 162 DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA 221
Query: 194 RFGLSVHGYSIRRHLNL--DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G VH R ++ + + +L+D+Y K L +A VF + R N + W +I
Sbjct: 222 REGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 281
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G AQ G + L S G D L S + A ++ GK +H YT +
Sbjct: 282 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL 341
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ + S++DMY KCG+ A F +M +R+++SW +I G HGHG EA+ LF +M
Sbjct: 342 DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ 401
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
V+ D + +LLSA SHSGLV+E R +F + +++P +HYACMVDLL RAGE+
Sbjct: 402 AEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGEL 461
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
EA +++ SM EP + VW LLS C HK ++G +V +L ++ D+ + ++SN
Sbjct: 462 REAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNIL 521
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVYVLKKL 549
A +W E G+R MR+ G++K G S EV+ E+H F D +H Q DI L+++
Sbjct: 522 AEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREV 581
Query: 550 YLEMR 554
MR
Sbjct: 582 EARMR 586
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 190/388 (48%), Gaps = 10/388 (2%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+A L+ G ++ ++LG+G+D + ++++++Y KCGK++ A F+ M +++
Sbjct: 11 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V W++++ G + +G+ RE + + M+ G +E + ++AC G +R G+ +HG
Sbjct: 71 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGV 128
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+R V SLV MY+K A VF + N+ TW ++ISG+A G +
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 188
Query: 263 LELLMEMQSCGFE-PDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF---DFNLVLGTSV 318
L + EMQ E PD + S L AC+ +G + G +H R N +L ++
Sbjct: 189 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGAL 248
Query: 319 IDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDH 378
+D+Y KC A +FD ++ R+ I W +I + G +EA+ LF + + V+ D
Sbjct: 249 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 308
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
+S+++ + LVE+G+ +K +VD+ + G EA +
Sbjct: 309 HVLSSVVAVFADFALVEQGKQ-VHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 367
Query: 439 SMSTEPGLAVWVALLSGC--HNHKKFSI 464
M + W A+++G H H + +I
Sbjct: 368 EMPAR-NVVSWTAMINGVGKHGHGREAI 394
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 202/442 (45%), Gaps = 37/442 (8%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
++T + ++ +Y AR++F+ +P R + T+NS+I Y+ + L
Sbjct: 130 VRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 189
Query: 62 GLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY--GNDVFVGSSML 118
++ +M + D +PD TF LKAC L + G ++ G ++ + ++L
Sbjct: 190 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALL 249
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++YVKC ++ AM F+ ++R++ + W+++I G GQ +EA+ ++R G+ AD
Sbjct: 250 DVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGH 309
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
V+ ++ AD G VH Y+ + LDV V SLVDMY K G A F+ M
Sbjct: 310 VLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREM 369
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N+V+W A+I+G ++G ++L EMQ+ G E D V+ ++ L AC+ G +
Sbjct: 370 PARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVD--- 426
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
RR+ +R D+ + ++ G G
Sbjct: 427 -----ECRRY---------------------FSRICQDRRMRPKAEHYACMVDLLGRAGE 460
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EA L L M ++P + +LLSA V GR D++++ P +Y
Sbjct: 461 LREAKELILSMP---MEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPV--NYV 515
Query: 419 CMVDLLARAGEVEEALKIVDSM 440
+ ++LA AGE E I +M
Sbjct: 516 MLSNILAEAGEWRECQGIRGAM 537
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 8/277 (2%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L++A A R G+ +H ++ D + +L+DMYAK G L +A VF M N
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
+V+W AL+ GF +G A L L EM+ G P+ +L + L AC G + G IHG
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHG 127
Query: 303 YTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
VR F+ + V+ S++ MYSK AR +FD + SR+L +WN +I+ Y G G +
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 362 ALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY--A 418
+L +F +M +PD TFASLL A S G EG M + + P
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILAG 246
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ + + A+++ D + + W ++ G
Sbjct: 247 ALLDVYVKCHRLPVAMQVFDGLERRNAIQ-WTTVIVG 282
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 297/526 (56%), Gaps = 13/526 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A ++F ++ V NS+I A+++ P++ ++++M + + D+ T+ LKAC
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM--NEAMVAFEKMQRKDLVCWS 146
L + + + +LG +D++V +++++ Y +CG + +AM FEKM +D V W+
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
SM+ GLV G+ R+A + M + + + ++ G + C ++ + F L +
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYAR-CREMSKA-FEL------FEK 241
Query: 207 HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLE 264
+ +++V Y+K G +++A +F M N+VTW +I+G+A+ GL
Sbjct: 242 MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR 301
Query: 265 LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYS 323
L+ +M + G + D+ +++S L AC + G L LG IH R N + +++DMY+
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYA 361
Query: 324 KCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFAS 383
KCG A +F+ + +DL+SWN ++ G+HGHG+EA+ LF +M ++PD TF +
Sbjct: 362 KCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 384 LLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTE 443
+L + +H+GL++EG +F M Y + P +HY C+VDLL R G ++EA+K+V +M E
Sbjct: 422 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 444 PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
P + +W ALL C H + I ++V ++KL+P D G ++L+SN +A + WE VA +R
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIR 541
Query: 504 KTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
M+ G++K G S VE+ +H F + DKSH + + I +L L
Sbjct: 542 SKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 151/310 (48%), Gaps = 42/310 (13%)
Query: 20 YGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSR-----------KESPF---------- 58
Y ++ A +LFE++P R +++++++ YS+ + P
Sbjct: 226 YARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTI 285
Query: 59 ------------EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
E L +QM+ ++ D++ L AC L +G I
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
G++ +V +++L++Y KCG + +A F + +KDLV W++M++GL +G +EA++ +
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 167 RMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAK 224
RM++EGI D+V + ++ +C G G+ + YS+ + +L +V+ LVD+ +
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHYGCLVDLLGR 464
Query: 225 TGHLDLASHVFKNMS-RINIVTWGALISGFAQNG---LAGSTLELLMEMQSCGFEPDSVS 280
G L A V + M N+V WGAL+ + +A L+ L+++ C +P + S
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPC--DPGNYS 522
Query: 281 LVSALLACAQ 290
L+S + A A+
Sbjct: 523 LLSNIYAAAE 532
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 207/441 (46%), Gaps = 35/441 (7%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L C +L +K ++ + + D+ + +++ C + N A+ F ++Q ++
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS--VH 200
+S+I N QP +A + M++ G+ AD L++AC+ G S + +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS--GQSWLPVVKMMH 140
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDL--ASHVFKNMSRINIVTWGALISGFAQNGL 258
+ + L+ D+ V +L+D Y++ G L + A +F+ MS + V+W +++ G + G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSV 318
L EM + D +S + L A+ ++ K+ + + + N V +++
Sbjct: 201 LRDARRLFDEMP----QRDLISWNTMLDGYARCR--EMSKAFELFE-KMPERNTVSWSTM 253
Query: 319 IDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
+ YSK G AR +FD+M ++++++W +IIA Y G +EA L QM+ + +K
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D + S+L+A + SGL+ G ++ + + ++D+ A+ G +++A +
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSIL-KRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 437 VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN------ 488
+ + + L W +L G H H K +I + + PD + A++ +
Sbjct: 373 FNDIPKK-DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 431
Query: 489 -------FFAMEQKWEEVAGV 502
F++ME+ ++ V V
Sbjct: 432 IDEGIDYFYSMEKVYDLVPQV 452
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 161/384 (41%), Gaps = 56/384 (14%)
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CA+L + +H IRR+L+ D+ + L+ + +LA VF + N+
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY 303
+LI AQN + EMQ G D+ + L AC+ +L + K +H +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 304 TVRR-FDFNLVLGTSVIDMYSKCGVPSC-------------------------------- 330
+ ++ + ++ID YS+CG
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 331 -ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
AR LFD+M RDLISWN ++ Y +A LF E M + + ++++++ S
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELF----EKMPERNTVSWSTMVMGYS 258
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL--- 446
+G +E R FD M K T + ++ A G ++EA ++VD M GL
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVT---WTIIIAGYAEKGLLKEADRLVDQMVAS-GLKFD 314
Query: 447 -AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKT 505
A +++L+ C S+G ++ +LK + +LG +A V N A+ + + ++K
Sbjct: 315 AAAVISILAACTESGLLSLGMRI-HSILKRS--NLGSNAYVLN--ALLDMYAKCGNLKKA 369
Query: 506 MRKSGMKKVPGYSVVEVNGELHAF 529
+P +V N LH
Sbjct: 370 F--DVFNDIPKKDLVSWNTMLHGL 391
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 44/84 (52%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
++NL + + ++ +Y ++ A +F ++P + + ++N+++ E +
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 63 LYNQMIKEDVRPDSSTFTVALKAC 86
L+++M +E +RPD TF L +C
Sbjct: 403 LFSRMRREGIRPDKVTFIAVLCSC 426
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 296/534 (55%), Gaps = 26/534 (4%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
I+ AR+LF+E+ V T+ ++I Y + E L++++ D + + T+T +
Sbjct: 83 IMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV---DAKKNVVTWTAMVGG 139
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
+ + E+++ + +V ++M++ Y + G+++ AM FEKM +++V W
Sbjct: 140 YIRSNKISDAEKLFNEMPN----KNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSW 195
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+++++ L G+ EA + RM + + + ++ GL+ DL
Sbjct: 196 NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDL-------------FE 242
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
R D+ +++ + G L A +F M + N+++W +I+G Q G + L++
Sbjct: 243 RMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKI 302
Query: 266 LMEMQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF--DFNLVLGTSVIDMY 322
M S G +P+ + VS L AC+ + L G+ +H + D V+ +++I+MY
Sbjct: 303 FSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVV-SALINMY 361
Query: 323 SKCGVPSCARALFDQ--MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
SKCG AR +FD RDL+SWN IIA+Y HG+G+EA++ F +M ++ KPD T
Sbjct: 362 SKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVT 421
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+ LLSA SH+GLVEEG +FD +V I E HYAC+VDL RAG ++EA ++ +
Sbjct: 422 YVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERL 481
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
T+P VW ALL+GC+ H IG++ AKK+L++ P++ G + L+SN +A KW E A
Sbjct: 482 ETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAA 541
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
VR M+ G+KK PG S +EV +H F++ DKSH+Q + I +L+ L+ +M+
Sbjct: 542 RVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMK 595
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 216/496 (43%), Gaps = 101/496 (20%)
Query: 18 ALYGG---KNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
A+ GG N I A KLF E+P + V ++N++I Y++ + L+ +M + +V
Sbjct: 135 AMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV-- 192
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
V+ +S++ E R+ + DV ++M+ G ++EA+ F
Sbjct: 193 ------VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMI-----AGLLDEALDLF 241
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ--------- 185
E+M +DL W++MI GL+ NG R A + M K+ + + ++ G +Q
Sbjct: 242 ERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALK 301
Query: 186 -----------------------ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
AC++L G VH + V ++L++MY
Sbjct: 302 IFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMY 361
Query: 223 AKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
+K G L A +F + S+ ++V+W +I+ +A +G + EM+ GF+PD V+
Sbjct: 362 SKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVT 421
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVI---DMYSKCGVPSCARALFDQ 337
V L AC+ G ++ G ++ FD LV S++ D Y+ C V C RA
Sbjct: 422 YVGLLSACSHAGLVEEG-------LKYFD-ELVKDRSILVREDHYA-CLVDLCGRA---- 468
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
G +EA F++ +ET KP + +LL+ + V+ G
Sbjct: 469 -------------------GRLKEAFG-FIERLET--KPSARVWGALLAGCNVHANVKIG 506
Query: 398 RYWFDLMVSKYKIQPTEK-HYACMVDLLARAGEVEEA----LKIVDS-MSTEPGLAVWVA 451
+ ++ +++P Y + ++ A G+ EA LK+ D + +PG + W+
Sbjct: 507 KQAAKKLL---EVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCS-WIE 562
Query: 452 LLSGCHNHKKFSIGEK 467
+ + H F +G+K
Sbjct: 563 VGNRVH---VFVVGDK 575
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 170/417 (40%), Gaps = 99/417 (23%)
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
M+ K G++ EA F++M+ D++ W+++I+G + G EA + R +DA
Sbjct: 73 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR-----VDAK 127
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
+ +V T++V Y ++ + A +F
Sbjct: 128 K---------------------------------NVVTWTAMVGGYIRSNKISDAEKLFN 154
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M N+V+W +I G+AQNG S + L +M P+
Sbjct: 155 EMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKM------PER------------------ 190
Query: 297 GKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
N+V +V+ M ++CG AR LFD+M RD+ISW +IA
Sbjct: 191 --------------NVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIA----- 231
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
G +EAL LF E M + D ++ ++++ L +G + R F+ M K I T
Sbjct: 232 GLLDEALDLF----ERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMI 287
Query: 417 YACMVDLLARAGEVEEALKIVDSM----STEPGLAVWVALLSGCHNHKKFSIGEKVAKKV 472
C+ + GE EEALKI M +P +V++L C N G++V + +
Sbjct: 288 TGCV-----QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII 342
Query: 473 LKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
K D +VS M K E+ RK M GM +V NG + A+
Sbjct: 343 SKTVYQDSTF--VVSALINMYSKCGELGTARK-MFDDGM--TSQRDLVSWNGIIAAY 394
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 34/175 (19%)
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-- 366
D N+ +I SK G AR LFD+M+ D+I+W +I+ Y G EEA LF
Sbjct: 64 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 123
Query: 367 --------------------------LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
++ M + ++ +++ + +G ++ Y
Sbjct: 124 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 183
Query: 401 FDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
F+ M + + + ++ +LA+ G +EEA ++ D M E + W A+++G
Sbjct: 184 FEKMPERNVVS-----WNTVMSMLAQCGRIEEARRLFDRMP-ERDVISWTAMIAG 232
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/603 (29%), Positives = 296/603 (49%), Gaps = 67/603 (11%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
++ + AR +F E+P R ++ +++ +R E + M + P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
T L +C +G ++ V+LG G+ V V +S+LN+Y KCG A FE+M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 139 ------------------RKDL-------------VCWSSMINGLVFNGQPREAVDAYKR 167
R DL V W++MI G NG +A+ + R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 168 MKKE-GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M E + DE + ++ ACA+LG+ R G VH Y +R + + +V +L+ YAK+G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 227 HLDLASHV---------------------------------FKNMSRINIVTWGALISGF 253
++ A + F M+ ++V W A+I G+
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG ++L M +CG EP+S +L + L CA + L GK IH +R + +
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ ++I MY++ G AR +FDQ+ R + I+W +I + HG GEEA+ LF +M+
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
V+PD T+ +LSA SH+G V EG+ ++D + ++++I P HYACMVDLLARAG
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA + + M EP W +LLS C HK + E A+K+L ++P++ G ++ ++N ++
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
+W + A + K ++ ++K G+S + ++H F +D H Q + + + +++
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600
Query: 552 EMR 554
E++
Sbjct: 601 EIK 603
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 181/416 (43%), Gaps = 69/416 (16%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVD-------------------------------TY 44
++ +YG D +A +FE +P+R V ++
Sbjct: 99 VLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSW 158
Query: 45 NSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEI--WRK 101
N++I Y++ + L L+++M+ E + PD T T L AC +L ++++G+++ +
Sbjct: 159 NAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYIL 218
Query: 102 AVELGYGN-------------------------------DVFVGSSMLNLYVKCGKMNEA 130
E+ Y + +V +++L YVK G M A
Sbjct: 219 RTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESA 278
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F M +D+V W++MI G NG+ EA+D ++ M G + + + ++ CA L
Sbjct: 279 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 338
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGAL 249
+G +H +IR L V +++ MYA++G A +F + R +TW ++
Sbjct: 339 ACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSM 398
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD 309
I AQ+G + L EM G EPD ++ V L AC+ GF+ GK +
Sbjct: 399 IVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQ 458
Query: 310 FNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEA 362
+ ++D+ ++ G+ S A+ +M D I+W ++++ +H + E A
Sbjct: 459 IAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 514
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 285/529 (53%), Gaps = 3/529 (0%)
Query: 22 GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTV 81
G+ DI S +FE++P V ++N++I + L QM + P+ +
Sbjct: 158 GRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS 215
Query: 82 ALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
LKAC +G +I ++ +D ++G ++++Y K +++AM F+ M +D
Sbjct: 216 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRD 275
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
L+ W+++I+G G+ EA + ++KEG+ + + ++++ A L + VH
Sbjct: 276 LILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHA 335
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+ + D V L+D Y K L A VF+ S +I+ ++I+ +Q
Sbjct: 336 LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEG 395
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
++L MEM G EPD L S L ACA + + GK +H + ++R F + G +++
Sbjct: 396 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 455
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
Y+KCG A F + R ++SW+ +I HGHG+ AL LF +M++ + P+H T
Sbjct: 456 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 515
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
S+L A +H+GLV+E + +F+ M + I TE+HY+CM+DLL RAG++++A+++V+SM
Sbjct: 516 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 575
Query: 441 STEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVA 500
+ +VW ALL HK +G+ A+K+ L P+ G H L++N +A W EVA
Sbjct: 576 PFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVA 635
Query: 501 GVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
VRK M+ S +KK P S VEV ++H FI+ DKSH ++I L +L
Sbjct: 636 KVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 684
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 230/446 (51%), Gaps = 4/446 (0%)
Query: 16 IIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++A+YGG + AR++F+E R ++N ++ AY + + + + ++ +M+ ++P
Sbjct: 48 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 107
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
F+ + AC ++ G ++ V +GY DVF ++++++YVK G+++ A V F
Sbjct: 108 TEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIF 167
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM D+V W+++I+G V NG A++ +MK G+ + ++ +++ACA G
Sbjct: 168 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 227
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ I+ + + D + LVDMYAK LD A VF MS +++ W ALISG +
Sbjct: 228 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 287
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
G + ++ G + +L + L + A + + +H + F F+
Sbjct: 288 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAH 347
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +ID Y KC S A +F++ S D+I+ +I + HGE A+ LF++M+
Sbjct: 348 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 407
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++PD +SLL+A + E+G+ ++ + + A +V A+ G +E+A
Sbjct: 408 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA-LVYTYAKCGSIEDA 466
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
++ S E G+ W A++ G H
Sbjct: 467 -ELAFSSLPERGVVSWSAMIGGLAQH 491
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 210/446 (47%), Gaps = 44/446 (9%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M E V + V LK CV D ++G ++ A+ G+G+DVFV ++++ +Y G
Sbjct: 1 MRAEGVCCNEFALPVVLK-CVP--DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 127 MNEAMVAF-EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
M++A F E ++ V W+ +++ V N Q +A+ + M GI E ++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 186 ACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT 245
AC + G VH +R DV +LVDMY K G +D+AS +F+ M ++V+
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ALISG NG +ELL++M+S G P+ L S L ACA G LG+ IHG+ +
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 306 R-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
+ D + +G ++DMY+K A +FD M RDLI WN +I+ G +EA S
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297
Query: 365 LFLQMIETMVKPDHSTFASLLSALSH----------SGLVEEGRYWFDLMVSKYKIQPTE 414
+F + + + + +T A++L + + L E+ + FD V I +
Sbjct: 298 IFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI---D 354
Query: 415 KHYAC-----------------------MVDLLARAGEVEEALKIVDSM---STEPGLAV 448
++ C M+ L++ E A+K+ M EP V
Sbjct: 355 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 414
Query: 449 WVALLSGCHNHKKFSIGEKVAKKVLK 474
+LL+ C + + G++V ++K
Sbjct: 415 LSSLLNACASLSAYEQGKQVHAHLIK 440
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 3/359 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK N + ++ +Y + + A K+F+ + R + +N++I S E
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
++ + KE + + +T LK+ SL ++ A ++G+ D V + +++
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC +++A+ FE+ D++ +SMI L A+ + M ++G++ D V+
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
L+ ACA L G VH + I+R D +LV YAK G ++ A F ++
Sbjct: 416 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 475
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+V+W A+I G AQ+G LEL M G P+ +++ S L AC G + K
Sbjct: 476 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 535
Query: 301 HGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIH 356
F + + +ID+ + G A L + M + S W ++ + +H
Sbjct: 536 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 289/535 (54%), Gaps = 3/535 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y +I AR +F++L + T+ +II Y++ L L+ QM + +V PD
Sbjct: 192 LIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 251
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ L AC L L+ G++I + G DV V + +++ Y KC ++ F+
Sbjct: 252 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 311
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M K+++ W++MI+G + N EA+ + M + G D ++ +C
Sbjct: 312 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 371
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y+I+ +L D V+ L+DMYAK+ L A VF M+ N++++ A+I G++
Sbjct: 372 GRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSS 431
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
LEL EM+ +P+ + + + A + + L+ G+ H V+ DF +
Sbjct: 432 QEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 491
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY+KCG AR +F+ RD++ WN +I+++ HG EEAL +F +M++ +
Sbjct: 492 TNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGI 551
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
+P++ TF ++LSA SH+G VE+G F+ M + I+P +HYAC+V LL R+G++ EA
Sbjct: 552 QPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAK 610
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ ++ M EP VW +LLS C +G+ A+ + +P D G + L+SN FA +
Sbjct: 611 EFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKG 670
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
W +V VR M S + K PG S +EVN +++ FI D +H + DI VL L
Sbjct: 671 MWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHRE-ADIGSVLDIL 724
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 233/446 (52%), Gaps = 4/446 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
+I + + + +AR +F+++P + + T++S++ YS++ E L ++ + K P
Sbjct: 90 LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHP 149
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
+ ++AC L ++ G ++ V G+ DV+VG+S+++ Y K G + EA + F
Sbjct: 150 NEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVF 209
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+++ K V W+++I G G+ +++ + +M++ + D V+ ++ AC+ L
Sbjct: 210 DQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLE 269
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H Y +RR +DV V L+D Y K + +F M NI++W +ISG+
Sbjct: 270 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 329
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
QN ++L EM G++PD + S L +C L+ G+ +H YT++ + +
Sbjct: 330 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 389
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +IDMY+K + A+ +FD M +++IS+N +I Y EAL LF +M +
Sbjct: 390 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 449
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
KP+ TFA+L++A S+ + G+ + + +V K + +VD+ A+ G +EEA
Sbjct: 450 QKPNEFTFAALITAASNLASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEA 508
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH 459
K+ +S S + W +++S H
Sbjct: 509 RKMFNS-SIWRDVVCWNSMISTHAQH 533
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 220/421 (52%), Gaps = 6/421 (1%)
Query: 71 DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
++RP F L+ +S + + I + + G +D F+ + ++N+ K +++ A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACAD 189
V F+KM K+L+ WSSM++ G EA+ + + +K G +E V+ +I+AC
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
LG G +HG+ +R + DV V TSL+D Y+K G+++ A VF +S VTW +
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 223
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I+G+ + G + +LEL +M+ PD + S L AC+ + FL+ GK IH Y +RR
Sbjct: 224 IAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT 283
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ ++ + +ID Y+KC R LFDQM +++ISW +I+ Y + EA+ LF +
Sbjct: 284 EMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGE 343
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M KPD S+L++ +E+GR + K ++ E ++D+ A++
Sbjct: 344 MNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTI-KANLESDEFVKNGLIDMYAKSN 402
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV--AKKVLKLNPDDLGIHALV 486
+ +A K+ D M+ E + + A++ G + +K S ++ +V P++ AL+
Sbjct: 403 LLIDAKKVFDVMA-EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALI 461
Query: 487 S 487
+
Sbjct: 462 T 462
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 206/445 (46%), Gaps = 45/445 (10%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I Y N + + RKLF+++ ++ + ++ ++I Y + +E + L+ +M +
Sbjct: 290 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 349
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD T L +C S L+ G ++ ++ +D FV + ++++Y K + +A
Sbjct: 350 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKK 409
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M ++++ +++MI G + EA++ + M+ +E LI A ++L
Sbjct: 410 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLAS 469
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
R G H ++ L+ V +LVDMYAK G ++ A +F + ++V W ++IS
Sbjct: 470 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 529
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNL 312
AQ+G A L + EM G +P+ V+ V+ L AC+ G ++ G + FN
Sbjct: 530 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLN---------HFNS 580
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ G + K G A +++ G G EA + IE
Sbjct: 581 MPGFGI-----KPGTEHYA----------------CVVSLLGRSGKLFEA----KEFIEK 615
Query: 373 M-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGEV 430
M ++P + SLLSA +G VE G+Y ++ +S P + Y + ++ A G
Sbjct: 616 MPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIS---TDPKDSGSYILLSNIFASKGMW 672
Query: 431 EEALKIVDSMST-----EPGLAVWV 450
+ K+ D M + EPG + W+
Sbjct: 673 ADVKKVRDRMDSSEVVKEPGRS-WI 696
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 131/256 (51%), Gaps = 9/256 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK NL + +I +Y N ++ A+K+F+ + + V +YN++I YS +E E L
Sbjct: 380 IKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEAL 439
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+++M +P+ TF + A +L L+ G++ + V++G FV ++++++Y
Sbjct: 440 ELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMY 499
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + EA F +D+VCW+SMI+ +G+ EA+ ++ M KEGI + V +
Sbjct: 500 AKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFV 559
Query: 182 GLIQACADLGDSRFGL----SVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
++ AC+ G GL S+ G+ I+ + +V + ++G L A +
Sbjct: 560 AVLSACSHAGRVEDGLNHFNSMPGFGIKP----GTEHYACVVSLLGRSGKLFEAKEFIEK 615
Query: 238 MS-RINIVTWGALISG 252
M + W +L+S
Sbjct: 616 MPIEPAAIVWRSLLSA 631
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 242/404 (59%), Gaps = 5/404 (1%)
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
P V Y+RM + +I++CADL + G VH +++ LD VQ +
Sbjct: 88 PLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAA 147
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
LV Y+K G ++ A VF M ++V W +L+SGF QNGLA + + +M+ GFEPD
Sbjct: 148 LVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPD 207
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
S + VS L ACAQ G + LG +H Y V D N+ LGT++I++YS+CG AR +FD
Sbjct: 208 SATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVK-PDHSTFASLLSALSHSGLVE 395
+M+ ++ +W +I++YG HG+G++A+ LF +M + P++ TF ++LSA +H+GLVE
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVE 327
Query: 396 EGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV---DSMSTEPGLAVWVAL 452
+GR + M Y++ P +H+ C+VD+L RAG ++EA + + D+ A+W A+
Sbjct: 328 DGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAM 387
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L C H+ + +G ++AK+++ L P++ G H ++SN +A+ K +EV+ +R M ++ ++
Sbjct: 388 LGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLR 447
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAI 556
K GYS++EV + + F M D+SH + +I L+ L + I
Sbjct: 448 KQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEI 491
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 6 LSAYGNS---VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+++YG S + ++I L I LF +PL +NS+I + S+ P +
Sbjct: 34 VTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVA 93
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
Y +M+ +V P + TFT +K+C L LK+G+ + AV G+G D +V ++++ Y
Sbjct: 94 YYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYS 153
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
KCG M A F++M K +V W+S+++G NG +A+ + +M++ G + D +
Sbjct: 154 KCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVS 213
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ ACA G G VH Y + L+++VK+ T+L+++Y++ G + A VF M N
Sbjct: 214 LLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETN 273
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+ W A+IS + +G ++L +M+ CG P++V+ V+ L ACA G ++ G+S+
Sbjct: 274 VAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSV- 332
Query: 302 GYTVRRFDFNLVLG----TSVIDMYSKCGVPSCARALFDQMQSRDLIS----WNVIIASY 353
Y + L+ G ++DM + G A Q+ + + W ++ +
Sbjct: 333 -YKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGAC 391
Query: 354 GIHGHGEEALSLFLQMIETMVK-PDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
+H + + + + ++I + P H S + AL SG +E + D M+
Sbjct: 392 KMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYAL--SGKTDEVSHIRDRMM 442
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 294/538 (54%), Gaps = 11/538 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
+R +F+ L + V +NS+I + + + E G + QM V D T K C
Sbjct: 81 SRLVFDSLHFKSVYLWNSLINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHE 140
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ DL G+ I K+++ G+ DV V +S++++Y KCG E + F++M +++ W+ +
Sbjct: 141 IGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVI 200
Query: 149 INGLVFNGQ---PREAVDAYKRMKKEGIDADEVVMMGLIQAC-ADLGDSRFGLSVHGYSI 204
++G +G +E K M+ EG+ D + L+ C +G G +HG+ +
Sbjct: 201 LSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIV 260
Query: 205 RRHLNL----DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
R L + +V + L+DMY+++ +D+ VF M N+ W A+I+G QNG
Sbjct: 261 RIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALE 320
Query: 261 STLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L L EMQ G EP+ VSLVS L AC+ + L K IHGY +R+ F+ ++ L ++
Sbjct: 321 EGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNAL 380
Query: 319 IDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
IDMYSKCG A+ +F+ RD ISW+ +I+ YG+HG GEEA+ ++ +M++ KPD
Sbjct: 381 IDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPD 440
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
T +LSA S +GLV+EG + ++KY+I+PT + AC+VD+L R+G++ +AL +
Sbjct: 441 MITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYI 500
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
+M EP +VW A++S H + + + +++L P++ + +SN A ++W+
Sbjct: 501 KTMPMEPSPSVWGAVVSASIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWD 560
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRA 555
V+ VR M+ + K PG S + +N H F DK H + I +L L L M+
Sbjct: 561 VVSEVRTMMKDRCLTKTPGCSWISINNTTHFFYAADKLHPCSKSIYELLGGLILLMKG 618
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 202/398 (50%), Gaps = 15/398 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS---RKESPFEVLGLYNQMIKEDV 72
++++Y KLF+E+P R V ++N I+ Y+ + EV G M E +
Sbjct: 169 LMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGL 228
Query: 73 RPDSSTFTVALKACVSLMDLK-MGEE----IWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+PD+ T + L C M + G E I R + +G G +V +G ++++Y + ++
Sbjct: 229 KPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRV 288
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADEVVMMGLIQA 186
+ F++M+ +++ W++MING V NG E + + M+ ++G++ ++V ++ ++ A
Sbjct: 289 DVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPA 348
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVT 245
C+ + +HGY+IR+ N DV + +L+DMY+K G LD A VF+ S R + ++
Sbjct: 349 CSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPIS 408
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++ISG+ +G + + +M G +PD +++V L AC++ G + G I+ +
Sbjct: 409 WSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAI 468
Query: 306 RRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE-- 360
++ + + V+DM + G A M S W ++++ IHG+ E
Sbjct: 469 NKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHGNSEMQ 528
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+ FL +E ++ + ++L ++ +V E R
Sbjct: 529 DLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVR 566
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 201/413 (48%), Gaps = 23/413 (5%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
LK+ ++ + + LG+ + F+ + +++ Y G + + F+ + K + W+S+ING
Sbjct: 43 LKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLING 102
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
V N EA + +M G+ D+ + + + C ++GD G +HG S++ LD
Sbjct: 103 FVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLD 162
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL---LME 268
V V SL+ MY+K G +F M N+ +W ++SG+A +G E+ + +
Sbjct: 163 VIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKD 222
Query: 269 MQSCGFEPDSVSLVSALLAC-AQIGFLKLGKSIHGYTVR-----RFDFNLVLGTSVIDMY 322
MQ G +PD+ ++ S L C +G G+ +HG+ VR + LG +IDMY
Sbjct: 223 MQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMY 282
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETMVKPDHSTF 381
S+ R +FD+M+ R++ +W +I + +G EE L LF +M + V+P+ +
Sbjct: 283 SRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSL 342
Query: 382 ASLLSALSH-SGLVEEGRYWFDLMVSKYKI--QPTEKHYAC--MVDLLARAGEVEEALKI 436
S+L A S +GL + + Y I Q C ++D+ ++ G ++ A ++
Sbjct: 343 VSVLPACSAVAGLTGVKQ------IHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQV 396
Query: 437 VDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGIHALVS 487
+ S W +++SG H K V K+L+L PD + I ++S
Sbjct: 397 FEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLS 449
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,880,013,745
Number of Sequences: 23463169
Number of extensions: 356244395
Number of successful extensions: 1048881
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8327
Number of HSP's successfully gapped in prelim test: 3218
Number of HSP's that attempted gapping in prelim test: 866523
Number of HSP's gapped (non-prelim): 59602
length of query: 589
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 441
effective length of database: 8,886,646,355
effective search space: 3919011042555
effective search space used: 3919011042555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)