BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048179
(589 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/553 (54%), Positives = 415/553 (75%), Gaps = 1/553 (0%)
Query: 10 GNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI 68
G+S+ R +IA G +I ARK+F+ELP RGV YNS+I+ YSR ++P EVL LY+QMI
Sbjct: 49 GSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI 108
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMN 128
E ++PDSSTFT+ +KAC+S + L+ GE +W KAV+ GY NDVFV SS+LNLY+KCGKM+
Sbjct: 109 AEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMD 168
Query: 129 EAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACA 188
EA V F KM ++D++CW++M+ G G+ +AV+ Y+ M+ EG D VVM+GL+QA
Sbjct: 169 EAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASG 228
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
DLGD++ G SVHGY R L ++V V+TSLVDMYAK G +++AS VF M V+WG+
Sbjct: 229 DLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LISGFAQNGLA E ++EMQS GF+PD V+LV L+AC+Q+G LK G+ +H Y ++R
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+ V T+++DMYSKCG S +R +F+ + +DL+ WN +I+ YGIHG+G+E +SLFL+
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M E+ ++PDH+TFASLLSALSHSGLVE+G++WF +M++KYKIQP+EKHY C++DLLARAG
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
VEEAL +++S + L +WVALLSGC NH+ S+G+ A K+L+LNPD +GI LVSN
Sbjct: 469 RVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSN 528
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
FFA KW+EVA VRK MR M+KVPGYS +EVNGEL F+MED SH+++ ++ VL+
Sbjct: 529 FFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRN 588
Query: 549 LYLEMRAISSWLQ 561
L E+R + S ++
Sbjct: 589 LKTEIRDVCSGVE 601
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 320/537 (59%), Gaps = 6/537 (1%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G + ++I DI AR++F++LP + +N+II YSR + L +Y+ M
Sbjct: 53 GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V PDS TF LKAC L L+MG + + LG+ DVFV + ++ LY KC ++
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 130 AMVAFE--KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
A FE + + +V W+++++ NG+P EA++ + +M+K + D V ++ ++ A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L D + G S+H ++ L ++ + SL MYAK G + A +F M N++ W
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
A+ISG+A+NG A +++ EM + PD++S+ SA+ ACAQ+G L+ +S++ Y V R
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY-VGR 351
Query: 308 FDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
D+ ++ + +++IDM++KCG AR +FD+ RD++ W+ +I YG+HG EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
+ M V P+ TF LL A +HSG+V EG +WF ++ +KI P ++HYAC++DLL
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREG-WWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHAL 485
RAG +++A +++ M +PG+ VW ALLS C H+ +GE A+++ ++P + G +
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 486 VSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDI 542
+SN +A + W+ VA VR M++ G+ K G S VEV G L AF + DKSH +YE+I
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 202/396 (51%), Gaps = 7/396 (1%)
Query: 96 EEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFN 155
++I + + LG F+ + +++ G + A F+ + R + W+++I G N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
++A+ Y M+ + D L++AC+ L + G VH R + DV VQ
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 216 TSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG 273
L+ +YAK L A VF+ + IV+W A++S +AQNG LE+ +M+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
+PD V+LVS L A + LK G+SIH V+ + L S+ MY+KCG + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
LFD+M+S +LI WN +I+ Y +G+ EA+ +F +MI V+PD + S +SA + G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+E+ R ++ V + + + ++D+ A+ G VE A ++V + + + VW A+
Sbjct: 338 SLEQARSMYEY-VGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAM 395
Query: 453 LS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALV 486
+ G H + +I A + ++P+D+ L+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 308/537 (57%), Gaps = 1/537 (0%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y + ARK+F+ +P R + ++N+I+ YS+ L + M +E+++P T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
L A +L + +G+EI A+ G+ + V + ++++++Y KCG + A F+ M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+++V W+SMI+ V N P+EA+ +++M EG+ +V +MG + ACADLGD G
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
+H S+ L+ +V V SL+ MY K +D A+ +F + +V+W A+I GFAQNG
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L +M+S +PD+ + VS + A A++ K IHG +R D N+ + T+
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
++DMY+KCG AR +FD M R + +WN +I YG HG G+ AL LF +M + +KP+
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 378 HSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIV 437
TF S++SA SHSGLVE G F +M Y I+ + HY MVDLL RAG + EA +
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 438 DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWE 497
M +P + V+ A+L C HK + EK A+++ +LNPDD G H L++N + WE
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658
Query: 498 EVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
+V VR +M + G++K PG S+VE+ E+H+F +H + I L+KL ++
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 246/467 (52%), Gaps = 7/467 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++L+ + A ++FE + + Y++++ +++ + L + +M +DV P
Sbjct: 74 KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
FT LK C +L++G+EI V+ G+ D+F + + N+Y KC ++NEA F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +DLV W++++ G NG R A++ K M +E + + ++ ++ A + L
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HGY++R + V + T+LVDMYAK G L+ A +F M N+V+W ++I +
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
QN + + +M G +P VS++ AL ACA +G L+ G+ IH +V D N+
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S+I MY KC A ++F ++QSR L+SWN +I + +G +AL+ F QM
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
VKPD T+ S+++A++ + + W +V + + +VD+ A+ G + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAK-WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNH----KKFSIGEKVAKKVLKLN 476
I D MS E + W A++ G H + E++ K +K N
Sbjct: 493 RLIFDMMS-ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 166/282 (58%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + +AR+LF+ + R V ++NS+I AY + E+P E + ++ +M+ E V+P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ AL AC L DL+ G I + +VELG +V V +S++++Y KC +++ A F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
K+Q + LV W++MI G NG+P +A++ + +M+ + D + +I A A+L +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+HG +R L+ +V V T+LVDMYAK G + +A +F MS ++ TW A+I G+
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+G + LEL EMQ +P+ V+ +S + AC+ G ++ G
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 196/374 (52%), Gaps = 6/374 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDL 142
L+ C SL +L+ +I + G + F + +++L+ + G ++EA FE + K
Sbjct: 44 LERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 143 VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
V + +M+ G +A+ + RM+ + ++ L++ C D + R G +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
++ +LD+ T L +MYAK ++ A VF M ++V+W +++G++QNG+A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
LE++ M +P +++VS L A + + + +GK IHGY +R FD + + T+++DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG AR LFD M R+++SWN +I +Y + + +EA+ +F +M++ VKP +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
L A + G +E GR+ L V + + ++ + + EV+ A + +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSV-ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 442 TEPGLAVWVALLSG 455
+ L W A++ G
Sbjct: 400 SRT-LVSWNAMILG 412
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I++Y ++ +A +F +L R + ++N++I+ +++ P + L ++QM V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
+PD+ T+ + A L + I + +VFV ++++++Y KCG + A +
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ M + + W++MI+G +G + A++ ++ M+K I + V + +I AC+ G
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLA 231
GL Y ++ + ++++ + ++VD+ + G L+ A
Sbjct: 555 VEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 322/556 (57%), Gaps = 12/556 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + +AR LF+E+P+R + ++N++I Y + + E L L N + D
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD---- 246
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T L AC D G I +++ G +++FV + +++LY + G++ + F+
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M +DL+ W+S+I N QP A+ ++ M+ I D + ++ L + LGD R
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 196 GLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
SV G+++R+ L D+ + ++V MYAK G +D A VF + ++++W +ISG+A
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 255 QNGLAGSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
QNG A +E+ M+ G + + VS L AC+Q G L+ G +HG ++ ++
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ TS+ DMY KCG A +LF Q+ + + WN +IA +G HGHGE+A+ LF +M++
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPDH TF +LLSA SHSGLV+EG++ F++M + Y I P+ KHY CMVD+ RAG++E
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
ALK + SMS +P ++W ALLS C H +G+ ++ + ++ P+ +G H L+SN +A
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
KWE V +R G++K PG+S +EV+ ++ F +++H YE++ L L +
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAK 726
Query: 553 MRAISSWLQGHMEEHE 568
++ I G++ +H
Sbjct: 727 LKMI-----GYVPDHR 737
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 256/488 (52%), Gaps = 31/488 (6%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQ-MIKEDV 72
+++ LY ++ AR F+ + R V +N +I Y R + EV+ ++ M+ +
Sbjct: 90 AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD TF LKAC +++D G +I A++ G+ DV+V +S+++LY + + A +
Sbjct: 150 TPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +D+ W++MI+G +G +EA+ ++ D V ++ L+ AC + GD
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGD 262
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+++H YSI+ L ++ V L+D+YA+ G L VF M ++++W ++I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-- 310
+ N + L EM+ +PD ++L+S +Q+G ++ +S+ G+T+R+ F
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
++ +G +V+ MY+K G+ ARA+F+ + + D+ISWN II+ Y +G EA+ ++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 371 ET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
E + + T+ S+L A S +G + +G ++ K + + D+ + G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGR 501
Query: 430 VEEALKI---VDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVA---KKVLK--LNPDD 479
+E+AL + + +++ P W L++ G H H GEK K++L + PD
Sbjct: 502 LEDALSLFYQIPRVNSVP----WNTLIACHGFHGH-----GEKAVMLFKEMLDEGVKPDH 552
Query: 480 LGIHALVS 487
+ L+S
Sbjct: 553 ITFVTLLS 560
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 189/402 (47%), Gaps = 44/402 (10%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR-M 168
+V + + ++NLY G + A F+ +Q +D+ W+ MI+G G E + + M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
G+ D +++AC + D G +H +++ DV V SL+ +Y++ +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
A +F M ++ +W A+ISG+ Q+G A L L +++ DSV++VS L AC
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSAC 257
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+ G G +IH Y+++ + L + +ID+Y++ G + +FD+M RDLISWN
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWN 317
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY-------- 399
II +Y ++ A+SLF +M + ++PD T SL S LS G + R
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 400 -WF----------DLMVSKYKIQPTEK------------HYACMVDLLARAGEVEEALKI 436
WF +M +K + + + + ++ A+ G EA+++
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437
Query: 437 VDSMSTEPGLA----VWVALLSGCHNHKKFSIGEKVAKKVLK 474
+ M E +A WV++L C G K+ ++LK
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 158/342 (46%), Gaps = 37/342 (10%)
Query: 161 AVDAYKRMKKEGIDADEVV-MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+ +A + K G ++ E+ + L + C +L ++ +H + +V + LV
Sbjct: 37 SANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLV 93
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDS 278
++Y G++ LA H F ++ ++ W +ISG+ + G + + + M S G PD
Sbjct: 94 NLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDY 153
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
+ S L AC + G IH ++ F +++ + S+I +YS+ AR LFD+
Sbjct: 154 RTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
M RD+ SWN +I+ Y G+ +EAL+L + D T SLLSA + +G G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 398 RYWFDLMVSKYKIQ---PTEKHYAC-MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALL 453
+ + Y I+ +E + ++DL A G + + K+ D M L W +++
Sbjct: 267 -----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD-LISWNSII 320
Query: 454 SGCHNHKKFSIGEKVAK--------KVLKLNPDDLGIHALVS 487
K + + E+ + ++ ++ PD L + +L S
Sbjct: 321 ------KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 306/548 (55%), Gaps = 34/548 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACV 87
ARK+F+E+P +N++I AY+ P + + M+ E P+ TF +KA
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 88 SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
+ L +G+ + AV+ G+DVFV +S+++ Y CG ++ A F ++ KD+V W+S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MING V G P +A++ +K+M+ E + A V M+G++ ACA + + FG V Y
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVF-------------------------------K 236
+N+++ + +++DMY K G ++ A +F
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ-SCGFEPDSVSLVSALLACAQIGFLK 295
+M + +IV W ALIS + QNG L + E+Q + + ++LVS L ACAQ+G L+
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 296 LGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
LG+ IH Y + N + +++I MYSKCG +R +F+ ++ RD+ W+ +I
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG G EA+ +F +M E VKP+ TF ++ A SH+GLV+E F M S Y I P E
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
KHYAC+VD+L R+G +E+A+K +++M P +VW ALL C H ++ E ++L+
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
L P + G H L+SN +A KWE V+ +RK MR +G+KK PG S +E++G +H F+ D
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 535 SHNQYEDI 542
+H E +
Sbjct: 623 AHPMSEKV 630
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 315/542 (58%), Gaps = 7/542 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED-VRP 74
I+ +Y + ARK+F+ +P + +N++I Y + E E + ++ +I E R
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D++T L A L +L++G +I A + G + +V + ++LY KCGK+ F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ ++ D+V +++MI+G NG+ ++ +K + G ++ L+ L
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL---M 336
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
++HGY ++ + V T+L +Y+K ++ A +F ++ +W A+ISG+
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF--NL 312
QNGL + L EMQ F P+ V++ L ACAQ+G L LGK +H VR DF ++
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSI 455
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ T++I MY+KCG + AR LFD M ++ ++WN +I+ YG+HG G+EAL++F +M+ +
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
+ P TF +L A SH+GLV+EG F+ M+ +Y +P+ KHYACMVD+L RAG ++
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
AL+ +++MS EPG +VW LL C HK ++ V++K+ +L+PD++G H L+SN +
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
++ + + A VR+T +K + K PGY+++E+ H F D+SH Q ++I L+KL +
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGK 695
Query: 553 MR 554
MR
Sbjct: 696 MR 697
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 235/471 (49%), Gaps = 25/471 (5%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDI----------------VSARKLFEELPLRGVDTYNSI 47
T++S + +II L+G +NDI AR +F + V +N +
Sbjct: 31 TSISHLAQTHAQII-LHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 48 IIAYSRKESPFEVLGLYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG 106
+ +S ESP L ++ + K D++P+SST+ A+ A D + G I +AV G
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 107 YGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYK 166
+++ +GS+++ +Y K ++ +A F++M KD + W++MI+G N E++ ++
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 167 RMKKEGIDA-DEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ E D ++ ++ A A+L + R G+ +H + + V T + +Y+K
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G + + S +F+ + +IV + A+I G+ NG +L L E+ G S +LVS +
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 286 LACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLI 344
G L L +IHGY ++ F + + T++ +YSK AR LFD+ + L
Sbjct: 330 PVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLP 386
Query: 345 SWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLM 404
SWN +I+ Y +G E+A+SLF +M ++ P+ T +LSA + G + G++ DL+
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 405 VSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
S + + ++ + A+ G + EA ++ D M T+ W ++SG
Sbjct: 447 RST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISG 495
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 9/393 (2%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
KT ++ + I+LY I LF E + YN++I Y+ L
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 63 LYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYV 122
L+ +++ R SST + LM + K+ L + + V +++ +Y
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHAS---VSTALTTVYS 365
Query: 123 KCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMG 182
K ++ A F++ K L W++MI+G NG +A+ ++ M+K + V +
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
++ ACA LG G VH + V T+L+ MYAK G + A +F M++ N
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
VTW +ISG+ +G L + EM + G P V+ + L AC+ G +K G I
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 303 YTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHG 359
+ R+ F + ++D+ + G A + M S W ++ + IH
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605
Query: 360 EEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
A ++ ++ E + PD+ + LLS + HS
Sbjct: 606 NLARTVSEKLFE--LDPDNVGYHVLLSNI-HSA 635
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 140/283 (49%), Gaps = 10/283 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K+N ++ + + +Y N+I SARKLF+E P + + ++N++I Y++ + +
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
L+ +M K + P+ T T L AC L L +G+ + + + ++V ++++ +Y
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KCG + EA F+ M +K+ V W++MI+G +GQ +EA++ + M GI V +
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS- 239
++ AC+ G + G + I R+ VK +VD+ + GHL A + MS
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 240 RINIVTWGALISG---FAQNGLAGSTLELLMEMQSCGFEPDSV 279
W L+ LA + E L E+ +PD+V
Sbjct: 586 EPGSSVWETLLGACRIHKDTNLARTVSEKLFEL-----DPDNV 623
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 315/552 (57%), Gaps = 5/552 (0%)
Query: 7 SAYG--NSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
S +G NSVG ++A Y + SARK+F+E+ R V ++NSII Y + L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVK 123
+ QM+ + D +T C + +G + V+ + + +++L++Y K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 124 CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
CG ++ A F +M + +V ++SMI G G EAV ++ M++EGI D + +
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
+ CA G VH + L D+ V +L+DMYAK G + A VF M +I
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 244 VTWGALISGFAQNGLAGSTLELL-MEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
++W +I G+++N A L L + ++ F PD ++ L ACA + G+ IHG
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 303 YTVRRFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEE 361
Y +R F + + S++DMY+KCG A LFD + S+DL+SW V+IA YG+HG G+E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 362 ALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMV 421
A++LF QM + ++ D +F SLL A SHSGLV+EG +F++M + KI+PT +HYAC+V
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 422 DLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLG 481
D+LAR G++ +A + +++M P +W ALL GC H + EKVA+KV +L P++ G
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 703
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
+ L++N +A +KWE+V +RK + + G++K PG S +E+ G ++ F+ D S+ + E+
Sbjct: 704 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 763
Query: 542 IVYVLKKLYLEM 553
I L+K+ M
Sbjct: 764 IEAFLRKVRARM 775
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 239/441 (54%), Gaps = 8/441 (1%)
Query: 19 LYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSST 78
+Y D+ A ++F+E+ + +N ++ ++ +GL+ +M+ V DS T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ 138
F+ K+ SL + GE++ ++ G+G VG+S++ Y+K +++ A F++M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 139 RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+D++ W+S+ING V NG + + + +M GI+ D ++ + CAD G +
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VH ++ + + + +L+DMY+K G LD A VF+ MS ++V++ ++I+G+A+ GL
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
AG ++L EM+ G PD ++ + L CA+ L GK +H + F++ + +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKP 376
++DMY+KCG A +F +M+ +D+ISWN II Y + + EALSLF L + E P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFD-LMVSKYKIQPTEKHYA-CMVDLLARAGEVEEAL 434
D T A +L A + ++GR +M + Y +++H A +VD+ A+ G + A
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAH 554
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
+ D ++++ L W +++G
Sbjct: 555 MLFDDIASKD-LVSWTVMIAG 574
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 5/299 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K S ++ +Y D+ SA+ +F E+ R V +Y S+I Y+R+ E +
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEI--WRKAVELGYGNDVFVGSSMLN 119
L+ +M +E + PD T T L C L G+ + W K +LG+ D+FV +++++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALMD 440
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEV 178
+Y KCG M EA + F +M+ KD++ W+++I G N EA+ + + +E DE
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ ++ ACA L G +HGY +R D V SLVDMYAK G L LA +F ++
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++V+W +I+G+ +G + L +M+ G E D +S VS L AC+ G + G
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 204/420 (48%), Gaps = 28/420 (6%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T L+ C LK G+E+ G+ D +GS + +Y CG + EA F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++++ + + W+ ++N L +G ++ +K+M G++ D + ++ + L
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ V SLV Y K +D A VF M+ ++++W ++I+G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
NGLA L + ++M G E D ++VS CA + LG+++H V+ F
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+++DMYSKCG A+A+F +M R ++S+ +IA Y G EA+ LF +M E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRY---W-------FDLMVSKYKIQPTEKHYACMVDL 423
+ PD T ++L+ + L++EG+ W FD+ VS ++D+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN-----------ALMDM 441
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSG----CHNHKKFSIGEKVAKKVLKLNPDD 479
A+ G ++EA + M + ++ W ++ G C+ ++ S+ + ++ + +PD+
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSKNCYANEALSLFNLLLEEK-RFSPDE 499
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 153/349 (43%), Gaps = 37/349 (10%)
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D D + ++Q CAD + G V + +D + + L MY G L AS
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
VF + + W L++ A++G ++ L +M S G E DS + + + +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 294 LKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ G+ +HG+ ++ F +G S++ Y K AR +FD+M RD+ISWN II
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 353 YGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL--------- 403
Y +G E+ LS+F+QM+ + ++ D +T S+ + + S L+ GR +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 404 ---------MVSKYKIQPTEK------------HYACMVDLLARAGEVEEALKIVDSMST 442
M SK + K Y M+ AR G EA+K+ + M
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 443 E---PGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
E P + A+L+ C ++ G++V + + +DLG VSN
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDLGFDIFVSN 436
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 304/543 (55%), Gaps = 34/543 (6%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
+++ Y D+ SARK+F+E+P R V N +I +Y E + ++ M +VRP
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D TF LKAC + +G +I A ++G + +FVG+ ++++Y KCG ++EA +
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M R+D+V W+S++ G N + +A++ + M+ I D M L+ A ++
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN----- 253
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
T+ MY K +F M + ++V+W +I +
Sbjct: 254 --------------------TTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
+N + +EL M++ GFEPD+VS+ S L AC L LGK IHGY R + NL+
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
L ++IDMY+KCG AR +F+ M+SRD++SW +I++YG G G +A++LF ++ ++
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ PD F + L+A SH+GL+EEGR F LM YKI P +H ACMVDLL RAG+V+EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+ + MS EP VW ALL C H IG A K+ +L P+ G + L+SN +A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+WEEV +R M+ G+KK PG S VEVN +H F++ D+SH Q ++I L L +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 554 RAI 556
+ +
Sbjct: 586 KEL 588
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 52/402 (12%)
Query: 54 KESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFV 113
++SP E + L Q++ D PD T + + + L DL+ +
Sbjct: 35 QKSPQETVFLLGQVL--DTYPDIRTLR-TVHSRIILEDLRCNSSL--------------- 76
Query: 114 GSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI 173
G ++ Y + A F+++ ++++ + MI V NG E V + M +
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV 136
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D +++AC+ G G +HG + + L+ + V LV MY K G L A
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 234 VFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGF 293
V MSR ++V+W +L+ G+AQN LE+ EM+S D+ ++ S L A +
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-- 254
Query: 294 LKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
T+ MY K +F +M + L+SWNV+I Y
Sbjct: 255 ----------------------TTENVMYVK--------DMFFKMGKKSLVSWNVMIGVY 284
Query: 354 GIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPT 413
+ EA+ L+ +M +PD + S+L A + + G+ + + K+ P
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-IERKKLIPN 343
Query: 414 EKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G +E+A + ++M + + W A++S
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 358 bits (918), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 307/565 (54%), Gaps = 39/565 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A LF +P R T+NS++ +++ + E L + M KE + +F L AC
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSG 164
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D+ G ++ + + +DV++GS+++++Y KCG +N+A F++M +++V W+S+
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSL 224
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR-H 207
I NG EA+D ++ M + ++ DEV + +I ACA L + G VHG ++
Sbjct: 225 ITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNM----------------------------- 238
L D+ + + VDMYAK + A +F +M
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344
Query: 239 --SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
+ N+V+W ALI+G+ QNG L L ++ P S + L ACA + L L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404
Query: 297 GKSIHGYTVRR-FDF------NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
G H + ++ F F ++ +G S+IDMY KCG +F +M RD +SWN +
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
I + +G+G EAL LF +M+E+ KPDH T +LSA H+G VEEGR++F M +
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
+ P HY CMVDLL RAG +EEA +++ M +P +W +LL+ C H+ ++G+ VA
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVA 584
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+L++ P + G + L+SN +A KWE+V VRK+MRK G+ K PG S +++ G H F
Sbjct: 585 EKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVF 644
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMR 554
+++DKSH + + I +L L EMR
Sbjct: 645 MVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 210/451 (46%), Gaps = 71/451 (15%)
Query: 75 DSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
DSS F L +C+ S + + ++ G+ N++F+ + +++ Y KCG + +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 134 FEKMQRKDLVCWSSMINGL-----------VFNGQPR--------------------EAV 162
F+KM ++++ W+S++ GL +F P EA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 163 DAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMY 222
+ M KEG +E ++ AC+ L D G+ VH + DV + ++LVDMY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLV 282
+K G+++ A VF M N+V+W +LI+ F QNG A L++ M EPD V+L
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 283 SALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKC-----------GVP- 328
S + ACA + +K+G+ +HG V+ + +++L + +DMY+KC +P
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 329 -------------------SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
AR +F +M R+++SWN +IA Y +G EEALSLF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEG-RYWFDLMVSKYKIQPTEKHY----ACMVDLL 424
V P H +FA++L A + + G + ++ +K Q E+ ++D+
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ G VEE + M E W A++ G
Sbjct: 438 VKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 223/489 (45%), Gaps = 84/489 (17%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y ++ A+++F+E+ R V ++NS+I + + E L ++ M++ V PD
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
T + AC SL +K+G+E+ + V+ ND+ + ++ +++Y KC ++ EA F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 135 E-------------------------------KMQRKDLVCWSSMINGLVFNGQPREAVD 163
+ KM +++V W+++I G NG+ EA+
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 164 AYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV------HGYSIRRHLNLDVKVQTS 217
+ +K+E + +++ACADL + G+ HG+ + D+ V S
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
L+DMY K G ++ VF+ M + V+W A+I GFAQNG LEL EM G +PD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
++++ L AC GF++ G+ R F G + + + C V RA
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDF------GVAPLRDHYTCMVDLLGRA---- 542
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLVEE 396
G EEA S MIE M ++PD + SLL+A +
Sbjct: 543 -------------------GFLEEAKS----MIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 397 GRYWFDLMVSKYKIQPTEK-HYACMVDLLARAGEVEEALKIVDSMSTE-----PGLAVWV 450
G+Y + ++ +++P+ Y + ++ A G+ E+ + + SM E PG + W+
Sbjct: 580 GKYVAEKLL---EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS-WI 635
Query: 451 ALLSGCHNH 459
+ H+H
Sbjct: 636 KIQG--HDH 642
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/545 (35%), Positives = 314/545 (57%), Gaps = 4/545 (0%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y D+ SAR LF+ +P R + ++N++I Y E L L+ M V
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD T T + AC L D ++G +I + G+ D+ V +S+ +Y+ G EA
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F +M+RKD+V W++MI+G +N P +A+D Y+ M ++ + DE+ + ++ ACA LGD
Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD 413
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ +H +I+ L V V +L++MY+K +D A +F N+ R N+++W ++I+G
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
N L L +M+ +P++++L +AL ACA+IG L GK IH + +R +
Sbjct: 474 LRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
L +++DMY +CG + A + F+ Q +D+ SWN+++ Y G G + LF +M++
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
+ V+PD TF SLL S S +V +G +F M Y + P KHYAC+VDLL RAGE++
Sbjct: 592 SRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQ 650
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
EA K + M P AVW ALL+ C H K +GE A+ + +L+ +G + L+ N +A
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYA 710
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
KW EVA VR+ M+++G+ G S VEV G++HAF+ +DK H Q ++I VL+ Y
Sbjct: 711 DCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYE 770
Query: 552 EMRAI 556
+M +
Sbjct: 771 KMSEV 775
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 253/488 (51%), Gaps = 9/488 (1%)
Query: 4 TNLSAYGNSVGR-IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+++S+ G +G +A++ ++V A +F ++ R + ++N ++ Y+++ E +
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 63 LYNQMI-KEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
LY++M+ V+PD TF L+ C + DL G+E+ V GY D+ V ++++ +Y
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
VKCG + A + F++M R+D++ W++MI+G NG E ++ + M+ +D D + +
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+I AC LGD R G +H Y I +D+ V SL MY G A +F M R
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH 301
+IV+W +ISG+ N L ++ M +PD +++ + L ACA +G L G +H
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 302 GYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGE 360
++ R +++ ++I+MYSKC A +F + +++ISW IIA ++
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 361 EALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
EAL +FL+ ++ ++P+ T + L+A + G + G+ V + + + +
Sbjct: 482 EAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKE-IHAHVLRTGVGLDDFLPNAL 539
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPD 478
+D+ R G + A +S + + W LL+G + S+ ++ +++K + PD
Sbjct: 540 LDMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 479 DLGIHALV 486
++ +L+
Sbjct: 598 EITFISLL 605
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 201/403 (49%), Gaps = 12/403 (2%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + L N M + V D F ++ C + G +++ A+ V +G++ L
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK-KEGIDADE 177
++V+ G + +A F KM ++L W+ ++ G G EA+ Y RM G+ D
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
+++ C + D G VH + +R LD+ V +L+ MY K G + A +F
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
M R +I++W A+ISG+ +NG+ LEL M+ +PD ++L S + AC +G +LG
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 298 KSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
+ IH Y + F ++ + S+ MY G A LF +M+ +D++SW +I+ Y +
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
++A+ + M + VKPD T A++LSA + G ++ G + + K I+
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG-----VELHKLAIKARLIS 431
Query: 417 YAC----MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
Y ++++ ++ +++AL I ++ + ++ W ++++G
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAG 473
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 145/311 (46%), Gaps = 8/311 (2%)
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
++GL NG+ EA+ M++ + DE V + L++ C G V+ ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 209 NLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLME 268
+L V++ + + M+ + G+L A +VF MS N+ +W L+ G+A+ G + L
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 269 MQSC-GFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCG 326
M G +PD + L C I L GK +H + VR ++ ++ + ++I MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
AR LFD+M RD+ISWN +I+ Y +G E L LF M V PD T S++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEP 444
A G GR D+ C + + AG EA K+ M +
Sbjct: 306 ACELLGDRRLGR---DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 445 GLAVWVALLSG 455
+ W ++SG
Sbjct: 363 -IVSWTTMISG 372
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
IK L +Y +I +Y I A +F +P + V ++ SII FE L
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
QM K ++P++ T T AL AC + L G+EI + G G D F+ +++L++Y
Sbjct: 485 IFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
V+CG+MN A F Q+KD+ W+ ++ G GQ V+ + RM K + DE+ +
Sbjct: 544 VRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 602
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+ C+ R GL + ++K +VD+ + G L A + M
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 242 -NIVTWGALISG 252
+ WGAL++
Sbjct: 663 PDPAVWGALLNA 674
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 314/545 (57%), Gaps = 4/545 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + + A+ LF+++ R + ++N++I Y+ + E+L L +M + +RPD
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF +L ++ DL+MG + + V+ G+ D+ + ++++ +Y+KCGK + E
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ KD+VCW+ MI+GL+ G+ +A+ + M + G D + ++ +CA LG
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHGY +R LD SL+ MYAK GHLD + +F+ M+ ++V+W A+ISG+AQ
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQ 424
Query: 256 NGLAGSTLELLMEMQSCGFEP-DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
N L L EM+ + DS ++VS L AC+ G L +GK IH +R F L
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
T+++DMYSKCG A+ FD + +D++SW ++IA YG HG G+ AL ++ + + +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+H F ++LS+ SH+G+V++G F MV + ++P +H AC+VDLL RA +E+A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
K T P + V +L C + K + + + + +++L P D G + + + FA
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
++W++V+ MR G+KK+PG+S +E+NG+ F M SH+ +D V +LK L EM
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREM 722
Query: 554 RAISS 558
S
Sbjct: 723 MQFGS 727
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 246/477 (51%), Gaps = 9/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY + ARK+FEE+ R V + ++I YSR E L N+M + ++P
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L + + L+ + AV G+ D+ V +SMLNLY KC + +A F+
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDF---AVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+++D+V W++MI+G G E + RM+ +G+ D+ + + D
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ ++D+ ++T+L+ MY K G + + V + + ++V W +ISG +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
G A L + EM G + S ++ S + +CAQ+G LG S+HGY +R + +
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM-IETM 373
S+I MY+KCG + +F++M RDL+SWN II+ Y + +AL LF +M +T+
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
+ D T SLL A S +G + G+ +++ + I+P +VD+ ++ G +E A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAA 502
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK--LNPDDLGIHALVSN 488
+ DS+S + + W L++G H K I ++ + L + P+ + A++S+
Sbjct: 503 QRCFDSISWKD-VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 213/419 (50%), Gaps = 6/419 (1%)
Query: 38 LRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEE 97
L +NS I S +VL ++ M+ + PD+ TF LKAC SL L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 98 IWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQ 157
I ++ + G+ +D ++ SS++NLY K G + A FE+M+ +D+V W++MI G
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 158 PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS 217
EA M+ +GI V ++ ++ ++ + +H +++ + D+ V S
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNS 184
Query: 218 LVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPD 277
++++Y K H+ A +F M + ++V+W +ISG+A G L+LL M+ G PD
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 278 SVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFD 336
+ ++L + L++G+ +H V+ FD ++ L T++I MY KCG + + +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 337 QMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEE 396
+ ++D++ W V+I+ G E+AL +F +M+++ AS++++ + G +
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 397 GRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
G ++ ++ ++ + A+ G ++++L I + M+ E L W A++SG
Sbjct: 365 GASVHGYVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 320/580 (55%), Gaps = 49/580 (8%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKE-DVRP 74
++A+Y + ARK+F+E+ + V ++NSII +Y++ P L ++++M E RP
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP 227
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D+ T L C SL +G+++ AV ++FVG+ ++++Y KCG M+EA F
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE----------------------- 171
M KD+V W++M+ G G+ +AV +++M++E
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 172 ------------GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL-------DV 212
GI +EV ++ ++ CA +G G +H Y+I+ ++L +
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407
Query: 213 KVQTSLVDMYAKTGHLDLASHVFKNMS--RINIVTWGALISGFAQNGLAGSTLELLMEM- 269
V L+DMYAK +D A +F ++S ++VTW +I G++Q+G A LELL EM
Sbjct: 408 MVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 270 -QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RFDFNLVLGTSVIDMYSKCG 326
+ C P++ ++ AL+ACA + L++GK IH Y +R + L + +IDMY+KCG
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLS 386
S AR +FD M +++ ++W ++ YG+HG+GEEAL +F +M K D T +L
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 387 ALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGL 446
A SHSG++++G +F+ M + + + P +HYAC+VDLL RAG + AL++++ M EP
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 447 AVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTM 506
VWVA LS C H K +GE A+K+ +L + G + L+SN +A +W++V +R M
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 507 RKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
R G+KK PG S VE F + DK+H ++I VL
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 247/515 (47%), Gaps = 67/515 (13%)
Query: 1 MIKTNLSAYG----NSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRK 54
+I L ++G N +I+ Y + A L P GV +NS+I +Y
Sbjct: 46 LIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 55 ESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG 114
+ L L+ M PD+ TF KAC + ++ GE ++ G+ ++VFVG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 115 SSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GI 173
++++ +Y +C +++A F++M D+V W+S+I G+P+ A++ + RM E G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 174 DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASH 233
D + ++ ++ CA LG G +H +++ + ++ V LVDMYAK G +D A+
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 234 VFKNMS-----------------------------------RINIVTWGALISGFAQNGL 258
VF NMS ++++VTW A ISG+AQ GL
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR---------RFD 309
L + +M S G +P+ V+L+S L CA +G L GK IH Y ++ D
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQM--QSRDLISWNVIIASYGIHGHGEEALSLFL 367
N+V+ +IDMY+KC ARA+FD + + RD+++W V+I Y HG +AL L
Sbjct: 406 ENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 368 QMIE--TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-----CM 420
+M E +P+ T + L A + + G+ + Y ++ + C+
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGK-----QIHAYALRNQQNAVPLFVSNCL 519
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+D+ A+ G + +A + D+M + + W +L++G
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTG 553
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 9/309 (2%)
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNM--SRINIVTWGALISGFAQNGLAGSTLELLM 267
L + + + L+ Y G L A + + S + W +LI + NG A L L
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVLGTSVIDMYSKCG 326
M S + PD+ + AC +I ++ G+S H + V F N+ +G +++ MYS+C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 327 VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI-ETMVKPDHSTFASLL 385
S AR +FD+M D++SWN II SY G + AL +F +M E +PD+ T ++L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ G G+ V+ IQ C+VD+ A+ G ++EA + +MS +
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-D 294
Query: 446 LAVWVALLSGCHNHKKFSIGEKVAKKVL--KLNPDDLGIHALVSNFFAMEQKWEEVAGVR 503
+ W A+++G +F ++ +K+ K+ D + A +S +A E GV
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG-YAQRGLGYEALGVC 353
Query: 504 KTMRKSGMK 512
+ M SG+K
Sbjct: 354 RQMLSSGIK 362
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 304/558 (54%), Gaps = 40/558 (7%)
Query: 38 LRGVD-----TYNSIIIAYSRKESPFEVLGLYNQMIKE---DVRPDSSTFTVALKACVSL 89
L+G++ ++N I +S E+P E LY QM++ + RPD T+ V K C L
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 90 MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMI 149
+G I ++L V ++ ++++ CG M A F++ +DLV W+ +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 150 NGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLN 209
NG G+ +A+ YK M+ EG+ D+V M+GL+ +C+ LGD G + Y L
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 210 LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL----------- 258
+ + + +L+DM++K G + A +F N+ + IV+W +ISG+A+ GL
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 259 ------------AGS--------TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
GS L L EMQ+ +PD ++++ L AC+Q+G L +G
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 299 SIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH Y + N+ LGTS++DMY+KCG S A ++F +Q+R+ +++ II +HG
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
A+S F +MI+ + PD TF LLSA H G+++ GR +F M S++ + P KHY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+ MVDLL RAG +EEA ++++SM E AVW ALL GC H +GEK AKK+L+L+P
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
D GI+ L+ + WE+ R+ M + G++K+PG S +EVNG + FI+ DKS
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 538 QYEDIVYVLKKLYLEMRA 555
+ E I L L MR+
Sbjct: 650 ESEKIYDRLHCLGRHMRS 667
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 200/423 (47%), Gaps = 47/423 (11%)
Query: 17 IALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDS 76
I ++ D+ +ARK+F+E P+R + ++N +I Y + + + +Y M E V+PD
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 77 STFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA------ 130
T + +C L DL G+E + E G + + +++++++ KCG ++EA
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 131 -----------MVA--------------FEKMQRKDLVCWSSMINGLVFNGQPREAVDAY 165
M++ F+ M+ KD+V W++MI G V + ++A+ +
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377
Query: 166 KRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKT 225
+ M+ DE+ M+ + AC+ LG G+ +H Y + L+L+V + TSLVDMYAK
Sbjct: 378 QEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKC 437
Query: 226 GHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSAL 285
G++ A VF + N +T+ A+I G A +G A + + EM G PD ++ + L
Sbjct: 438 GNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Query: 286 LACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQ-SRD 342
AC G ++ G+ RF+ N L + ++D+ + G+ A L + M D
Sbjct: 498 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEAD 557
Query: 343 LISWNVIIASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
W ++ +HG+ GE+A L++ P S LL G+ E
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLEL-----DPSDSGIYVLL-----DGMYGEANM 607
Query: 400 WFD 402
W D
Sbjct: 608 WED 610
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/510 (36%), Positives = 293/510 (57%), Gaps = 6/510 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y +I SA K+F ++ LR V + S+I Y + + E L L+N+M + +V +
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T+ + AC L L G+ V+ G + +S+L++YVKCG ++ A F
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ DLV W++MI G NG EA+ +++MK I + V + ++ C + +
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G SVHG SI+ + D V +LV MYAK A +VF+ S +IV W ++ISGF+Q
Sbjct: 362 GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF----N 311
NG L L M S P+ V++ S ACA +G L +G S+H Y+V+ F +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK-LGFLASSS 479
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +GT+++D Y+KCG P AR +FD ++ ++ I+W+ +I YG G +L LF +M++
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
KP+ STF S+LSA H+G+V EG+ +F M Y P+ KHY CMVD+LARAGE+E
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFA 491
+AL I++ M +P + + A L GC H +F +GE V KK+L L+PDD + LVSN +A
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVE 521
+ +W + VR M++ G+ K+ G+S +E
Sbjct: 660 SDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 227/443 (51%), Gaps = 5/443 (1%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++++LYG AR +F+++P + ++ Y + EV+ LY+ ++K R
Sbjct: 81 KLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY 140
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVEL-GYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
D F+ ALKAC L DL G++I + V++ + N V G +L++Y KCG++ A
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKV 198
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F + +++VCW+SMI G V N E + + RM++ + +E LI AC L
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G HG ++ + L + TSL+DMY K G + A VF S +++V W A+I G+
Sbjct: 259 HQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 318
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
NG L L +M+ +P+ V++ S L C I L+LG+S+HG +++ ++
Sbjct: 319 THNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN 378
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ +++ MY+KC A+ +F+ +D+++WN II+ + +G EAL LF +M
Sbjct: 379 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES 438
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA-CMVDLLARAGEVEE 432
V P+ T ASL SA + G + G V + + H ++D A+ G+ +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A I D++ E W A++ G
Sbjct: 499 ARLIFDTIE-EKNTITWSAMIGG 520
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 199/404 (49%), Gaps = 12/404 (2%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ + V ++ +Y DI +AR++F E + + ++I+ Y+ S E
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L L+ +M +++P+ T L C + +L++G + ++++G D V ++++++
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHM 386
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KC + +A FE KD+V W+S+I+G NG EA+ + RM E + + V +
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHL--NLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
L ACA LG G S+H YS++ + V V T+L+D YAK G A +F +
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
N +TW A+I G+ + G +LEL EM +P+ + S L AC G + GK
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 299 SIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGI 355
+ ++F T ++DM ++ G A + ++M + D+ + + G+
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 626
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRY 399
H + + +M++ + PD +++ L+S L S +GR+
Sbjct: 627 HSRFDLGEIVIKKMLD--LHPDDASYYVLVSNLYAS----DGRW 664
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 186/381 (48%), Gaps = 8/381 (2%)
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
SS + L C ++ L+ + +G D+ + + +++LY G +A + F+
Sbjct: 44 SSPCFLLLSKCTNIDSLRQSHGVLTGNGLMG---DISIATKLVSLYGFFGYTKDARLVFD 100
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ D W M+ N + E V Y + K G D++V ++AC +L D
Sbjct: 101 QIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDN 160
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H ++ + D V T L+DMYAK G + A VF +++ N+V W ++I+G+ +
Sbjct: 161 GKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L L L M+ + + + ++AC ++ L GK HG V+ + + L
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
TS++DMY KCG S AR +F++ DL+ W +I Y +G EALSLF +M +
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP+ T AS+LS +E GR L + K I T A +V + A+ + +A
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSI-KVGIWDTNVANA-LVHMYAKCYQNRDA- 396
Query: 435 KIVDSMSTEPGLAVWVALLSG 455
K V M +E + W +++SG
Sbjct: 397 KYVFEMESEKDIVAWNSIISG 417
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 149/309 (48%), Gaps = 11/309 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN 242
L+ C ++ R HG L D+ + T LV +Y G+ A VF + +
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 243 IVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG 302
W ++ + N + ++L + GF D + AL AC ++ L GK IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 303 YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
V+ F+ V+ T ++DMY+KCG A +F+ + R+++ W +IA Y + EE
Sbjct: 167 QLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 363 LSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVD 422
L LF +M E V + T+ +L+ A + + +G+ WF + K I+ + ++D
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK-WFHGCLVKSGIELSSCLVTSLLD 285
Query: 423 LLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHN---HKKFSIGEKVAKKVLKLNPD 478
+ + G++ A ++ + S L +W A++ G HN ++ S+ +K+ K +++ P+
Sbjct: 286 MYVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKM--KGVEIKPN 342
Query: 479 DLGIHALVS 487
+ I +++S
Sbjct: 343 CVTIASVLS 351
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 289/495 (58%), Gaps = 5/495 (1%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E + LY M++ PD+ +F LK+C SL G+++ + G + FV ++++
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDL--VCWSSMINGLVFNGQPREAVDAYKRMKKEGIDAD 176
++Y KCG + +A FE+ + VC++++I+G N + +A ++RMK+ G+ D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 177 EVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK 236
V M+GL+ C G S+HG ++ L+ +V V S + MY K G ++ +F
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 237 NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
M ++TW A+ISG++QNGLA LEL +M+S G PD +LVS L +CA +G K+
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 297 GKSIHGYTVRRFDF--NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
G + G V F N+ + + I MY++CG + ARA+FD M + L+SW +I YG
Sbjct: 276 GHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG GE L LF MI+ ++PD + F +LSA SHSGL ++G F M +YK++P
Sbjct: 335 MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY+C+VDLL RAG ++EA++ ++SM EP AVW ALL C HK + E KV++
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
P+++G + L+SN ++ + E + +R MR+ +K PGYS VE G +H F+ D+
Sbjct: 455 FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDR 514
Query: 535 SHNQYEDIVYVLKKL 549
SH Q E++ +L +L
Sbjct: 515 SHEQTEEVHRMLDEL 529
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 29/350 (8%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W+ + L + E++ Y+ M + G D ++++CA L G +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 205 RRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRIN--IVTWGALISGFAQNGLAGST 262
+ + V T+L+ MY K G + A VF+ + + V + ALISG+ N
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDM 321
+ M+ G DSV+++ + C +L LG+S+HG V+ D + + S I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y KCG R LFD+M + LI+WN +I+ Y +G + L L+ QM + V PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 382 ASLLSALSHSG----------LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVE 431
S+LS+ +H G LVE + ++ VS I + AR G +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS-----------MYARCGNLA 309
Query: 432 EALKIVDSMSTEPGLAVWVALLSGCHN-HKKFSIGEKVAKKVLK--LNPD 478
+A + D M + L W A++ GC+ H IG + ++K + PD
Sbjct: 310 KARAVFDIMPVK-SLVSWTAMI-GCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 185/397 (46%), Gaps = 11/397 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+I++Y + ARK+FEE P + YN++I Y+ + ++ +M + V
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
DS T + C L +G + + V+ G ++V V +S + +Y+KCG +
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M K L+ W+++I+G NG + ++ Y++MK G+ D ++ ++ +CA LG
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G V +V V + + MYA+ G+L A VF M ++V+W A+I +
Sbjct: 274 KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV 313
+G+ L L +M G PD V L AC+ G K + + + ++ L
Sbjct: 334 GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD--KGLELFRAMKREYKLE 391
Query: 314 LG----TSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
G + ++D+ + G A + M D W ++ + IH + + A F +
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK 451
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
+IE +P++ + L+S + +EG + +M+
Sbjct: 452 VIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 12/256 (4%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+K L + + I +Y + + R+LF+E+P++G+ T+N++I YS+ ++VL
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
LY QM V PD T L +C L K+G E+ + G+ +VFV ++ +++Y
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
+CG + +A F+ M K LV W++MI +G + + M K GI D V +
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ------TSLVDMYAKTGHLDLASHVF 235
++ AC S GL+ G + R + + K++ + LVD+ + G LD A
Sbjct: 363 MVLSAC-----SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 236 KNMS-RINIVTWGALI 250
++M + WGAL+
Sbjct: 418 ESMPVEPDGAVWGALL 433
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 312/519 (60%), Gaps = 10/519 (1%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWR 100
V ++NS+I +R E L ++ M K + P S+F A+KAC SL D+ G++ +
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 101 KAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPRE 160
+A GY +D+FV S+++ +Y CGK+ +A F+++ ++++V W+SMI G NG +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 161 AVDAYKRMKKEGIDADEVVM---MGL---IQACADLGDSRFGLSVHGYSIRRHLNLDVKV 214
AV +K + + D D+ + MGL I AC+ + S+H + I+R + V V
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 215 QTSLVDMYAKTGH--LDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEM-QS 271
+L+D YAK G + +A +F + + V++ +++S +AQ+G++ E+ + ++
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSC 330
++++L + LLA + G L++GK IH +R + ++++GTS+IDMY KCG
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
AR FD+M+++++ SW +IA YG+HGH +AL LF MI++ V+P++ TF S+L+A SH
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL EG WF+ M ++ ++P +HY CMVDLL RAG +++A ++ M +P +W
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
+LL+ C HK + E ++ +L+ + G + L+S+ +A +W++V VR M+ G
Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRG 520
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
+ K PG+S++E+NGE+H F++ D+ H Q E I L +L
Sbjct: 521 LVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 178/353 (50%), Gaps = 23/353 (6%)
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
+ + D+ W+S+I L +G EA+ A+ M+K + I+AC+ L D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 197 LSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQN 256
H + D+ V ++L+ MY+ G L+ A VF + + NIV+W ++I G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 257 GLAGSTLELLMEM------QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G A + L ++ DS+ LVS + AC+++ L +SIH + ++R FD
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 310 FNLVLGTSVIDMYSKCGVP--SCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFL 367
+ +G +++D Y+K G + AR +FDQ+ +D +S+N I++ Y G EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 368 QMIET-MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
++++ +V + T +++L A+SHSG + G+ D ++ + ++ ++D+ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIVGTSIIDMYCK 334
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNP 477
G VE A K D M + + W A+++ G H H A K L+L P
Sbjct: 335 CGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGH---------AAKALELFP 377
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 12/359 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + ARK+F+E+P R + ++ S+I Y + + + L+ ++ ++ D
Sbjct: 117 LIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDD 176
Query: 76 SSTF------TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
+ F + AC + + E I ++ G+ V VG+++L+ Y K G+
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 130 AMVA--FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQA 186
A+ F+++ KD V ++S+++ +G EA + ++R+ K + + + + + ++ A
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+ G R G +H IR L DV V TS++DMY K G ++ A F M N+ +W
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
A+I+G+ +G A LEL M G P+ ++ VS L AC+ G G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 307 RFDFNLVLG--TSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEA 362
RF L ++D+ + G A L +M+ + D I W+ ++A+ IH + E A
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 292/512 (57%), Gaps = 5/512 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y + AR +F+ + R V ++N++I Y R + L +++ M+ E V D
Sbjct: 158 LLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLD 217
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+T L C L DL+MG + + E G+ + V ++++N+Y+KCG+M+EA F+
Sbjct: 218 HATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFD 277
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M+R+D++ W+ MING +G A++ + M+ EG+ + V + L+ C D
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HG+++R+ + D+ ++TSL+ MYAK +DL VF S+ + W A+I+G Q
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ 397
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L L L M+ EP+ +L S L A A + L+ +IH Y + F +L
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQ----SRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
T ++ +YSKCG A +F+ +Q S+D++ W +I+ YG+HG G AL +F++M+
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEV 430
+ V P+ TF S L+A SHSGLVEEG F M+ YK HY C+VDLL RAG +
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 431 EEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFF 490
+EA ++ ++ EP VW ALL+ C H+ +GE A K+ +L P++ G + L++N +
Sbjct: 578 DEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 491 AMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
A +W+++ VR M G++K PG+S +E+
Sbjct: 638 AALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 227/437 (51%), Gaps = 9/437 (2%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR--PDSSTFTVAL 83
I ARKLFEE+P + +YN +I Y R+ + + ++ +M+ E V+ PD T+
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 84 KACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
KA L +K+G + + + +G D +V +++L +Y+ GK+ A F+ M+ +D++
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 144 CWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYS 203
W++MI+G NG +A+ + M E +D D ++ ++ C L D G +VH
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 204 IRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ L ++V+ +LV+MY K G +D A VF M R +++TW +I+G+ ++G + L
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMY 322
EL MQ G P++V++ S + C + GK +HG+ VR+ + ++++ TS+I MY
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 323 SKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
+KC V C R +F W+ IIA + +AL LF +M V+P+ +T
Sbjct: 365 AKCKRVDLCFR-VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
SLL A + + + ++K + +V + ++ G +E A KI + +
Sbjct: 424 NSLLPAYAALADLRQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 442 TE---PGLAVWVALLSG 455
+ + +W AL+SG
Sbjct: 483 EKHKSKDVVLWGALISG 499
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 316/546 (57%), Gaps = 10/546 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KEDVRP 74
+I +Y ++ A ++F+EL + T++S++ + + SP++ + + +M+ DV P
Sbjct: 102 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D T + AC L + ++G + + G+ ND+ + +S+LN Y K EA+ F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
+ + KD++ WS++I V NG EA+ + M +G + + ++ ++QACA D
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G H +IR+ L +VKV T+LVDMY K + A VF + R ++V+W ALISGF
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 255 QNGLAGSTLE----LLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
NG+A ++E +L+E + PD++ +V L +C+++GFL+ K H Y ++ FD
Sbjct: 342 LNGMAHRSIEEFSIMLLENNT---RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 398
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N +G S++++YS+CG A +F+ + +D + W +I YGIHG G +AL F M
Sbjct: 399 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 458
Query: 370 IETM-VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
+++ VKP+ TF S+LSA SH+GL+ EG F LMV+ Y++ P +HYA +VDLL R G
Sbjct: 459 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVG 518
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
+++ A++I M P + LL C H+ + E VAKK+ +L + G + L+SN
Sbjct: 519 DLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSN 578
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
+ ++ +WE V +R ++++ G+KK S++E+ ++H F+ +D+ H + E + +LK+
Sbjct: 579 VYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 638
Query: 549 LYLEMR 554
L L M+
Sbjct: 639 LDLHMK 644
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 256/441 (58%), Gaps = 10/441 (2%)
Query: 27 VSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKAC 86
V AR++F E+ R + +N+++ + SR++ EVL ++ M +++ +PD+ T VALKAC
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 87 VSLMDLKMGEEIW---RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLV 143
L ++ GE I +K V LG +D++VGSS++ +Y+KCG+M EA+ F+++++ D+V
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 144 CWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
WSSM++G NG P +AV+ ++RM + D V ++ L+ AC L +SR G VHG+
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
IRR + D+ + SL++ YAK+ A ++FK ++ ++++W +I+ + QNG A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L + +M G EP+ +++ L ACA L+ G+ H +R+ + + + T+++DM
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF-LQMIETMVKPDHST 380
Y KC P A A+F ++ +D++SW +I+ + ++G ++ F + ++E +PD
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+L + S G +E+ + F V KY A +V+L +R G + A K+ + +
Sbjct: 369 MVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 441 STEPGLAVWVALLSGCHNHKK 461
+ + + VW +L++G H K
Sbjct: 428 ALKDTV-VWTSLITGYGIHGK 447
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 187/379 (49%), Gaps = 7/379 (1%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ Y A LF+ + + V +++++I Y + + E L ++N M+ +
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
P+ +T L+AC + DL+ G + A+ G +V V ++++++Y+KC EA
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 320
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADLG 191
F ++ RKD+V W ++I+G NG +++ + M E D ++M+ ++ +C++LG
Sbjct: 321 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 380
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
H Y I+ + + + SLV++Y++ G L AS VF ++ + V W +LI+
Sbjct: 381 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 440
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR--RF 308
G+ +G LE M +S +P+ V+ +S L AC+ G + G I V R
Sbjct: 441 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRL 500
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFL 367
NL ++D+ + G A + +M S ++ + IH +GE A ++
Sbjct: 501 APNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAK 560
Query: 368 QMIETMVKPDHSTFASLLS 386
++ E ++ +H+ + L+S
Sbjct: 561 KLFE--LESNHAGYYMLMS 577
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 345 bits (884), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 313/552 (56%), Gaps = 13/552 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y N ++ ++F+E+P R V ++N++I + + + L L+ +M P+
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S + TVA+ AC L+ L+ G+EI RK V+ G+ D +V S+++++Y KC + A F+
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
KM RK LV W+SMI G V G + V+ RM EG + + ++ AC+ +
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +HGY IR +N D+ V SL+D+Y K G +LA VF + +W +IS +
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYIS 387
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIH-GYTVRRFDFNLVL 314
G +E+ +M S G +PD V+ S L AC+Q+ L+ GK IH + R + + +L
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL 447
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
++++DMYSKCG A +F+ + +D++SW V+I++YG HG EAL F +M + +
Sbjct: 448 LSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KPD T ++LSA H+GL++EG +F M SKY I+P +HY+CM+D+L RAG + EA
Sbjct: 508 KPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 435 KIV-DSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+I+ + T + L S C H + S+G+++A+ +++ PDD + ++ N +A
Sbjct: 568 EIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASG 627
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+ W+ VR M++ G++K PG S +E++ ++ F ED+SH + E++ L
Sbjct: 628 ESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL------- 680
Query: 554 RAISSWLQGHME 565
+ L GHME
Sbjct: 681 ----ALLSGHME 688
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 256/477 (53%), Gaps = 7/477 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV-R 73
+I +Y D SAR +FE +R V +NS++ YS+ + L ++ +++ +
Sbjct: 45 LINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICV 104
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
PDS TF +KA +L +G I V+ GY DV V SS++ +Y K ++
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
F++M +D+ W+++I+ +G+ +A++ + RM+ G + + V + I AC+ L
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H +++ LD V ++LVDMY K L++A VF+ M R ++V W ++I G+
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
G + S +E+L M G P +L S L+AC++ L GK IHGY +R + ++
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI 344
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S+ID+Y KCG + A +F + Q SWNV+I+SY G+ +A+ ++ QM+
Sbjct: 345 YVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VKPD TF S+L A S +E+G+ L +S+ +++ E + ++D+ ++ G +E
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKE 463
Query: 433 ALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
A +I +S+ + + W ++S G H + ++ + + L PD + + A++S
Sbjct: 464 AFRIFNSI-PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 183/364 (50%), Gaps = 7/364 (1%)
Query: 75 DSSTFTVALKACV-SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
+SS L+ C S L+ + + ++ + LG DV + S++N+Y C A
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 134 FEKMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA-DEVVMMGLIQACADLG 191
FE R D+ W+S+++G N + ++ +KR+ I D +I+A LG
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H ++ DV V +SLV MYAK + + VF M ++ +W +IS
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
F Q+G A LEL M+S GFEP+SVSL A+ AC+++ +L+ GK IH V++ F+
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
+ + ++++DMY KC AR +F +M + L++WN +I Y G + + + +MI
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 371 ETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYAC-MVDLLARAGE 429
+P +T S+L A S S + G++ ++ + + + C ++DL + GE
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR--SVVNADIYVNCSLIDLYFKCGE 359
Query: 430 VEEA 433
A
Sbjct: 360 ANLA 363
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 338 bits (867), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 325/577 (56%), Gaps = 23/577 (3%)
Query: 1 MIKTNLSAYG------NS--VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYS 52
M+ + AYG NS + ++A+YG + S++ L R + T+N+++ +
Sbjct: 219 MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 53 RKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDV 111
+ E E L +M+ E V PD T + L AC L L+ G+E+ A++ G +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
FVGS+++++Y C ++ F+ M + + W++MI G N +EA+ + M++
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 172 -GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDL 230
G+ A+ M G++ AC G ++HG+ ++R L+ D VQ +L+DMY++ G +D+
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 231 ASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS-----------CGFEPDSV 279
A +F M ++VTW +I+G+ + L LL +MQ+ +P+S+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+L++ L +CA + L GK IH Y ++ ++ +G++++DMY+KCG +R +FDQ+
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
+++I+WNVII +YG+HG+G+EA+ L M+ VKP+ TF S+ +A SHSG+V+EG
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCH 457
F +M Y ++P+ HYAC+VDLL RAG ++EA ++++ M + A W +LL
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
H IGE A+ +++L P+ + L++N ++ W++ VR+ M++ G++K PG
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
S +E E+H F+ D SH Q E + L+ L+ MR
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 207/406 (50%), Gaps = 14/406 (3%)
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGND-VFVGSSM 117
E + Y MI ++PD+ F LKA L D+++G++I + GYG D V V +++
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+NLY KCG F+++ ++ V W+S+I+ L + A++A++ M E ++
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 178 VVMMGLIQACADLGDSR---FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHV 234
++ ++ AC++L G VH Y +R+ L+ + +LV MY K G L + +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 235 FKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFL 294
+ ++VTW ++S QN LE L EM G EPD ++ S L AC+ + L
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 295 KLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIAS 352
+ GK +H Y ++ D N +G++++DMY C R +FD M R + WN +IA
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 353 YGIHGHGEEALSLFLQMIETM-VKPDHSTFASLLSALSHSGLV--EEGRYWFDLMVSKYK 409
Y + H +EAL LF+ M E+ + + +T A ++ A SG +E + F V K
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF---VVKRG 435
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++D+ +R G+++ A++I M + L W +++G
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 219/442 (49%), Gaps = 19/442 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ LY D + K+F+ + R ++NS+I + E L + M+ E+V P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 76 SSTFTVALKACVSLM---DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
S T + AC +L L MG+++ + G N F+ ++++ +Y K GK+ + V
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKV 257
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
+DLV W+++++ L N Q EA++ + M EG++ DE + ++ AC+ L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 193 SRFGLSVHGYSIRR-HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
R G +H Y+++ L+ + V ++LVDMY + VF M I W A+I+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 252 GFAQNGLAGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FD 309
G++QN L L + M +S G +S ++ + AC + G ++IHG+ V+R D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF--L 367
+ + +++DMYS+ G A +F +M+ RDL++WN +I Y H E+AL L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 368 QMIETMV---------KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
Q +E V KP+ T ++L + + + +G+ + K + +
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGS 556
Query: 419 CMVDLLARAGEVEEALKIVDSM 440
+VD+ A+ G ++ + K+ D +
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQI 578
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 145 WSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSI 204
W ++ V + REAV Y M GI D L++A ADL D G +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 205 RRHLNLD-VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTL 263
+ +D V V +LV++Y K G VF +S N V+W +LIS L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 264 ELLMEMQSCGFEPDSVSLVSALLACAQIGF---LKLGKSIHGYTVRRFDFNLVLGTSVID 320
E M EP S +LVS + AC+ + L +GK +H Y +R+ + N + +++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
MY K G + ++ L RDL++WN +++S + EAL +M+ V+PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+L A SH ++ G+ + + + +VD+ +V ++ D M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 441 STEPGLAVWVALLSG 455
+ + +W A+++G
Sbjct: 365 -FDRKIGLWNAMIAG 378
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 335 bits (859), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 295/506 (58%), Gaps = 14/506 (2%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
AR +FE + V +NS+I YS +P + L Y +M+++ PD TF LKAC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
L D++ G + V+ G+ +++V + +L++Y+ CG++N + FE + + ++V W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY------ 202
I+G V N + +A++A++ M+ G+ A+E +M+ L+ AC D G HG+
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 203 --SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
+ + +V + TSL+DMYAK G L A ++F M +V+W ++I+G++QNG A
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L + ++M G PD V+ +S + A G +LG+SIH Y + F + + +++
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET-MVKPDH 378
+MY+K G A+ F+ ++ +D I+W V+I HGHG EALS+F +M E PD
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 379 STFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
T+ +L A SH GLVEEG+ +F M + ++PT +HY CMVD+L+RAG EEA ++V
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDL--GIHALVSNFFAMEQKW 496
+M +P + +W ALL+GC H+ + +++ V + P++L GI+ L+SN +A +W
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAE--PEELGSGIYVLLSNIYAKAGRW 537
Query: 497 EEVAGVRKTMRKSGMKKVPGYSVVEV 522
+V +R++M+ + KV G+S VE
Sbjct: 538 ADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 211/420 (50%), Gaps = 23/420 (5%)
Query: 67 MIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK 126
M+K+ +P S L+ C SL++L + K+ + +V S +++ C +
Sbjct: 1 MMKKHYKPILSQ----LENCRSLVELNQLHGLMIKSSVI---RNVIPLSRLIDFCTTCPE 53
Query: 127 ---MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGL 183
++ A FE + + W+SMI G + P +A+ Y+ M ++G D +
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 184 IQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINI 243
++AC+ L D +FG VHG+ ++ +++ V T L+ MY G ++ VF+++ + N+
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNV 173
Query: 244 VTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHG- 302
V WG+LISGF N +E EMQS G + + +V L+AC + + GK HG
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF 233
Query: 303 --------YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
Y + FN++L TS+IDMY+KCG AR LFD M R L+SWN II Y
Sbjct: 234 LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS 293
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+G EEAL +FL M++ + PD TF S++ A G + G+ VSK
Sbjct: 294 QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS-IHAYVSKTGFVKDA 352
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLA---VWVALLSGCHNHKKFSIGEKVAKK 471
+V++ A+ G+ E A K + + + +A V + L S H ++ SI +++ +K
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y D+ +AR LF+ +P R + ++NSII YS+ E L ++ M+ + PD
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF ++A + ++G+ I + G+ D + +++N+Y K G A AFE
Sbjct: 317 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG-IDADEVVMMGLIQACADLGDSR 194
+++KD + W+ +I GL +G EA+ ++RM+++G D + +G++ AC+ +G
Sbjct: 377 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 436
Query: 195 FGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGALISG 252
G H L V+ +VD+ ++ G + A + K M + N+ WGAL++G
Sbjct: 437 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSV 279
+ LEL ++S EP+ +
Sbjct: 497 CDIH----ENLELTDRIRSMVAEPEEL 519
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 303/575 (52%), Gaps = 37/575 (6%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I++Y + A LF+ L V + S+I ++ + + L + +M PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA-- 133
+ F LK+C +MDL+ GE + V LG D++ G++++N+Y K M +
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 134 ----------------------------------FEKMQRKDLVCWSSMINGLVFNGQPR 159
FE M RKD+V ++++I G +G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 160 EAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLV 219
+A+ + M + D + ++ ++ D G +HGY IR+ ++ DV + +SLV
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 220 DMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSV 279
DMYAK+ ++ + VF + + ++W +L++G+ QNG L L +M + +P +V
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 280 SLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQM 338
+ S + ACA + L LGK +HGY +R F N+ + ++++DMYSKCG AR +FD+M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 339 QSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGR 398
D +SW II + +HGHG EA+SLF +M VKP+ F ++L+A SH GLV+E
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 399 YWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN 458
+F+ M Y + +HYA + DLL RAG++EEA + M EP +VW LLS C
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 459 HKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYS 518
HK + EKVA+K+ ++ +++G + L+ N +A +W+E+A +R MRK G++K P S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Query: 519 VVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
+E+ + H F+ D+SH + I LK + +M
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 36/389 (9%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLR------------------GVD--------- 42
GN++ + A G +S +F+E+P R G+D
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 43 ------TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGE 96
+YN+II Y++ + L + +M D++PDS T + L +D+ G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNG 156
EI + G +DV++GSS++++Y K ++ ++ F ++ +D + W+S++ G V NG
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 157 QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQT 216
+ EA+ +++M + V +I ACA L G +HGY +R ++ + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 217 SLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEP 276
+LVDMY+K G++ A +F M+ ++ V+W A+I G A +G + L EM+ G +P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 277 DSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG--TSVIDMYSKCGVPSCARAL 334
+ V+ V+ L AC+ +G + + + N L +V D+ + G A
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 335 FDQMQSRDLIS-WNVIIASYGIHGHGEEA 362
+M S W+ +++S +H + E A
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELA 531
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 297 GKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIH 356
K +H +R + + VI +Y+ + A LF ++S +++W +I +
Sbjct: 24 AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+AL+ F++M + PDH+ F S+L + +
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 306/536 (57%), Gaps = 2/536 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++A+Y AR++F+E+ +R +YN++I Y + E E + ++ + + + +PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L+AC L DL + + I+ ++ G+ + V + ++++Y KCG M A F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M+ KD V W+S+I+G + +G EA+ +K M AD + + LI L D +F
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + +D+ V +L+DMYAK G + + +F +M + VTW +IS +
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
G + L++ +M+ PD + + L CA + +LGK IH +R ++ L +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G ++I+MYSKCG + +F++M RD+++W +I +YG++G GE+AL F M ++ +
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD F +++ A SHSGLV+EG F+ M + YKI P +HYAC+VDLL+R+ ++ +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ + +M +P ++W ++L C E+V++++++LNPDD G L SN +A +
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLY 550
KW++V+ +RK+++ + K PGYS +EV +H F D S Q E I L+ LY
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 243/474 (51%), Gaps = 27/474 (5%)
Query: 14 GRIIALYGGKNDIVSARKLFEEL-PLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
G++I Y + S+ +F + P + V +NSII A+S+ E L Y ++ + V
Sbjct: 43 GKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKV 102
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
PD TF +KAC L D +MG+ ++ + +++G+ +D+FVG++++++Y + G + A
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M +DLV W+S+I+G +G EA++ Y +K I D + ++ A +L
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
+ G +HG++++ +N V V LV MY K A VF M + V++ +I G
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFN 311
+ + + ++ + +E F+PD +++ S L AC + L L K I+ Y ++ F
Sbjct: 283 YLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ +ID+Y+KCG AR +F+ M+ +D +SWN II+ Y G EA+ LF M+
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 372 TMVKPDHSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACM 420
+ DH T+ L+S + HS ++ G DL VS +
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG-ICIDLSVSN-----------AL 449
Query: 421 VDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+D+ A+ GEV ++LKI SM T + W ++S C F+ G +V ++ K
Sbjct: 450 IDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFGDFATGLQVTTQMRK 502
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 334 bits (857), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 291/531 (54%), Gaps = 6/531 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL--YNQMIKEDVRPDSSTFTVALKAC 86
AR+L +L + ++S+I +S + L Y M + V P TF LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWS 146
L D + V+ G +D FV +S+++ Y G + A F+ + KD+V W+
Sbjct: 115 FKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 147 SMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRR 206
+MI+G V NG EA+ + MKK G+ A+E+ ++ +++A + D RFG SVHG +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 207 -HLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
+ DV + +SLVDMY K D A VF M N+VTW ALI+G+ Q+ + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 266 LMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSK 324
EM P+ +L S L ACA +G L G+ +H Y ++ + N GT++ID+Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 325 CGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASL 384
CG A +F+++ +++ +W +I + HG+ +A LF M+ + V P+ TF ++
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 385 LSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEP 444
LSA +H GLVEEGR F M ++ ++P HYACMVDL R G +EEA +++ M EP
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 445 GLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRK 504
VW AL C HK + +G+ A +V+KL P G + L++N ++ Q W+EVA VRK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 505 TMRKSGMKKVPGYSVVEVNGELHAFI-MEDKSHNQYEDIVYVLKKLYLEMR 554
M+ + K PG+S +EV G+L FI +DK + +D+ L + ++MR
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 12/242 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +YG + A+K+F+E+P R V T+ ++I Y + + + ++ +M+K DV P+
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + L AC + L G + ++ + G+++++LYVKCG + EA++ FE
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG---- 191
++ K++ W++MING +G R+A D + M + +EV M ++ ACA G
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQ--TSLVDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
R LS+ G N++ K +VD++ + G L+ A + + M V WGA
Sbjct: 426 GRRLFLSMKG-----RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 249 LI 250
L
Sbjct: 481 LF 482
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK ++ + +I LY + A +FE L + V T+ ++I ++ +
Sbjct: 332 MIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDA 391
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIW---RKAVELGYGNDVFVGSSM 117
L+ M+ V P+ TF L AC ++ G ++ + + D + + M
Sbjct: 392 FDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY--ACM 449
Query: 118 LNLYVKCGKMNEAMVAFEKMQRKDL-VCWSSMINGLVFN 155
++L+ + G + EA E+M + V W ++ + +
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 317/563 (56%), Gaps = 13/563 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY ++ AR LF++ ++ V T+NS+I Y+ E LG++ M VR
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+F +K C +L +L+ E++ V+ G+ D + ++++ Y KC M +A+ F+
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 136 KMQ-RKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ ++V W++MI+G + N EAVD + MK++G+ +E ++ A + S
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE 414
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
VH ++ + V T+L+D Y K G ++ A+ VF + +IV W A+++G+A
Sbjct: 415 ----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQI-GFLKLGKSIHGYTVR-RFDFNL 312
Q G + +++ E+ G +P+ + S L CA + GK HG+ ++ R D +L
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++++ MY+K G A +F + + +DL+SWN +I+ Y HG +AL +F +M +
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
VK D TF + +A +H+GLVEEG +FD+MV KI PT++H +CMVDL +RAG++E+
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A+K++++M G +W +L+ C HKK +G A+K++ + P+D + L+SN +A
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
W+E A VRK M + +KK PGYS +EV + ++F+ D+SH + I L+ L
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 553 MRAI------SSWLQGHMEEHEE 569
++ + S LQ +EH+E
Sbjct: 771 LKDLGYEPDTSYVLQDIDDEHKE 793
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 226/459 (49%), Gaps = 11/459 (2%)
Query: 2 IKTNLSAYGNSVGRI-IALYG--GKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
K Y N V ++ I +G + + +A LF++ P R ++Y S++ +SR
Sbjct: 16 FKPKFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQ 75
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
E L+ + + + D S F+ LK +L D G ++ + ++ G+ +DV VG+S++
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV 135
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+ Y+K + F++M+ +++V W+++I+G N E + + RM+ EG +
Sbjct: 136 DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSF 195
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
+ A+ G GL VH ++ L+ + V SL+++Y K G++ A +F
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++VTW ++ISG+A NGL L + M+ S S + CA + L+ +
Sbjct: 256 EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTE 315
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS-RDLISWNVIIASYGIH 356
+H V+ F F+ + T+++ YSKC A LF ++ +++SW +I+ + +
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 357 GHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKH 416
EEA+ LF +M V+P+ T++ +L+AL ++ ++ + Y+ T
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG- 431
Query: 417 YACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D + G+VEEA K+ + + + W A+L+G
Sbjct: 432 -TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++KTN ++ Y + A K+F + + + +++++ Y++
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSL-MDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
+ ++ ++ K ++P+ TF+ L C + + G++ A++ + + V S++L
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y K G + A F++ + KDLV W+SMI+G +GQ +A+D +K MKK + D V
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTS-LVDMYAKTGHLDLASHVFKNM 238
+G+ AC G G +R K S +VD+Y++ G L+ A V +NM
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 304/581 (52%), Gaps = 42/581 (7%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI------ 68
++I+ Y ++ A +F+E+ +R +YN+++IAY+ +E F+ L+ I
Sbjct: 62 KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYS 121
Query: 69 KEDVRPDSSTFTVALKACVSLMDLKMG---EEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+ RPDS + + LKA D +G ++ + G+ +DVFVG+ M+ Y KC
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLI 184
+ A F++M +D+V W+SMI+G +G + YK M + V ++ +
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 185 QACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV 244
QAC D FGL VH I H+ +D+ + +++ YAK G LD A +F MS + V
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQS-------------------------------CG 273
T+GA+ISG+ +GL + L EM+S CG
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 274 FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCAR 332
P++V+L S L + LK GK IH + +R D N+ + TS+ID Y+K G A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 333 ALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSG 392
+FD + R LI+W II +Y +HG + A SLF QM KPD T ++LSA +HSG
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVAL 452
+ ++ FD M++KY I+P +HYACMV +L+RAG++ +A++ + M +P VW AL
Sbjct: 482 DSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGAL 541
Query: 453 LSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMK 512
L+G I ++ ++ P++ G + +++N + +WEE VR M++ G+K
Sbjct: 542 LNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLK 601
Query: 513 KVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
K+PG S +E L +FI +D S + +++ +++ L M
Sbjct: 602 KIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 5/264 (1%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
+ G II+ Y + A LF E+ G+ T+N++I + EV+ + +MI+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
RP++ T + L + +LK G+EI A+ G N+++V +S+++ Y K G + A
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
F+ + + L+ W+++I +G A + +M+ G D+V + ++ A A G
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 192 DSRFGLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIV-TWGAL 249
DS + + ++ + V+ +V + ++ G L A M I WGAL
Sbjct: 482 DSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGAL 541
Query: 250 ISGFAQNG---LAGSTLELLMEMQ 270
++G + G +A + L EM+
Sbjct: 542 LNGASVLGDLEIARFACDRLFEME 565
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 34/228 (14%)
Query: 294 LKLGKSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY 353
L+L I ++++ +F L + +I Y++ A +FD++ R+ S+N ++ +Y
Sbjct: 42 LQLHARIVVFSIKPDNF---LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 354 GIHGHGEEALSLFLQMIET------MVKPDHSTFASLLSALSHS-------------GLV 394
+A SLFL I + +PD + + +L ALS G V
Sbjct: 99 TSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 395 EEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
G + D+ V M+ + +E A K+ D MS E + W +++S
Sbjct: 159 IRGGFDSDVFVGN-----------GMITYYTKCDNIESARKVFDEMS-ERDVVSWNSMIS 206
Query: 455 GCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGV 502
G F +K+ K +L + ++S F A Q + + G+
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL 254
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 300/537 (55%), Gaps = 13/537 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I+LY A K+FEE+P R + ++NS+I Y F L L+ +M+K +PD
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 76 SSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
+ AL AC + KMG+EI R +E G DV V +S+L++Y K G+++ A
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG---DVMVMTSILDMYSKYGEVSYAE 287
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE-GIDADEVVMMGLIQACADL 190
F M ++++V W+ MI NG+ +A +++M ++ G+ D + + L+ A A L
Sbjct: 288 RIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
G ++HGY++RR + ++T+L+DMY + G L A +F M+ N+++W ++I
Sbjct: 348 E----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFD 309
+ + QNG S LEL E+ PDS ++ S L A A+ L G+ IH Y V+ R+
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQM 369
N ++ S++ MY+ CG AR F+ + +D++SWN II +Y +HG G ++ LF +M
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Query: 370 IETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGE 429
I + V P+ STFASLL+A S SG+V+EG +F+ M +Y I P +HY CM+DL+ R G
Sbjct: 524 IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGN 583
Query: 430 VEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNF 489
A + ++ M P +W +LL+ NHK +I E A+++ K+ D+ G + L+ N
Sbjct: 584 FSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNM 643
Query: 490 FAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVL 546
+A +WE+V ++ M G+ + S VE G+ H F D+SH I VL
Sbjct: 644 YAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 228/413 (55%), Gaps = 8/413 (1%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +LF+E+ +N +I ++ E + Y++M+ V+ D+ T+ +K+
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSM 148
+ L+ G++I ++LG+ +DV+V +S+++LY+K G +A FE+M +D+V W+SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 149 INGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHL 208
I+G + G ++ +K M K G D M + AC+ + + G +H +++R +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 209 NL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
DV V TS++DMY+K G + A +F M + NIV W +I +A+NG
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 268 EM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKC 325
+M + G +PD ++ ++ L A A + G++IHGY +RR F ++VL T++IDMY +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
G A +FD+M +++ISWN IIA+Y +G AL LF ++ ++ + PD +T AS+L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVD 438
A + S + EGR +V K + +V + A G++E+A K +
Sbjct: 439 PAYAESLSLSEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 177/345 (51%), Gaps = 18/345 (5%)
Query: 127 MNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQA 186
M +A+ F++M + D W+ MI G G EAV Y RM G+ AD +I++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 187 CADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
A + G +H I+ DV V SL+ +Y K G A VF+ M +IV+W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
++ISG+ G S+L L EM CGF+PD S +SAL AC+ + K+GK IH + VR
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 307 -RFDF-NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R + ++++ TS++DMYSK G S A +F+ M R++++WNV+I Y +G +A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 365 LFLQMIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ----PTEKHYAC 419
F +M E ++PD T +LL A + EGR + Y ++ P
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPA----SAILEGR-----TIHGYAMRRGFLPHMVLETA 370
Query: 420 MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG-CHNHKKFS 463
++D+ G+++ A I D M+ E + W ++++ N K +S
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYS 414
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 5/238 (2%)
Query: 222 YAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSL 281
+A + ++ A +F M++ + W +I GF GL ++ M G + D+ +
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 282 VSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQS 340
+ + A I L+ GK IH ++ F ++ + S+I +Y K G A +F++M
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 341 RDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYW 400
RD++SWN +I+ Y G G +L LF +M++ KPD + S L A SH + G+
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE- 252
Query: 401 FDLMVSKYKIQPTEKHY-ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ +I+ + ++D+ ++ GEV A +I + M + + W ++ GC+
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI-GCY 308
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 319/556 (57%), Gaps = 16/556 (2%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMI-KED 71
V I++Y DI S+R++F+ R ++ +N++I Y + + E + L+ + I ++
Sbjct: 254 VSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKE 313
Query: 72 VRPDSSTFTVALKACVSLMDLKMGEE----IWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
+ D T+ +A A +L +++G + + + EL + + +S++ +Y +CG +
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL----PIVIVNSLMVMYSRCGSV 369
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+++ F M+ +D+V W++MI+ V NG E + M+K+G D + + L+ A
Sbjct: 370 HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAA 429
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVT 245
++L + G H + IR+ + + + + L+DMY+K+G + ++ +F+ + + T
Sbjct: 430 SNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQAT 488
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTV 305
W ++ISG+ QNG T + +M P++V++ S L AC+QIG + LGK +HG+++
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 306 RRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALS 364
R++ D N+ + ++++DMYSK G A +F Q + R+ +++ +I YG HG GE A+S
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 365 LFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
LFL M E+ +KPD TF ++LSA S+SGL++EG F+ M Y IQP+ +HY C+ D+L
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 425 ARAGEVEEALKIVDSMSTEPGLA-VWVALLSGCHNHKKFSIGEKVAKKVLKLN--PDDLG 481
R G V EA + V + E +A +W +LL C H + + E V++++ K + + G
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSG 728
Query: 482 IHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYED 541
L+SN +A EQKW+ V VR+ MR+ G+KK G S +E+ G ++ F+ D+ H +
Sbjct: 729 YEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSE 788
Query: 542 IVYVLKKLYLEMRAIS 557
I V+ L +MR S
Sbjct: 789 IYDVIDGLAKDMRGDS 804
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 229/465 (49%), Gaps = 19/465 (4%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED--VRPDSSTFTVALKAC 86
AR+LF+ +P +N+III + P E L Y++M K D+ T++ LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 87 VSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM------VAFEKMQRK 140
+LK G+ + + + V +S++N+YV C + F+ M+RK
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
++V W+++I+ V G+ EA + M + + V + + A + + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 201 GYSIR--RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
G ++ D+ V +S + MYA+ G ++ + VF + NI W +I + QN
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 259 AGSTLELLME-MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGT 316
++EL +E + S D V+ + A A + + ++LG+ HG+ + F + +V+
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 317 SVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKP 376
S++ MYS+CG + +F M+ RD++SWN +I+++ +G +E L L +M + K
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 377 DHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKI 436
D+ T +LLSA S+ E G+ ++ + IQ E + ++D+ +++G + + K+
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLI-RQGIQ-FEGMNSYLIDMYSKSGLIRISQKL 475
Query: 437 VD-SMSTEPGLAVWVALLSGC----HNHKKFSIGEKVAKKVLKLN 476
+ S E A W +++SG H K F + K+ ++ ++ N
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 13/242 (5%)
Query: 223 AKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCG--FEPDSVS 280
+ G+ LA +F + + V W +I GF N L L M+ D+ +
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 281 LVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKC-GVPSC-----ARA 333
S L ACA+ LK GK++H + +R + + V+ S+++MY C P C R
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 334 LFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGL 393
+FD M+ +++++WN +I+ Y G EA F M+ VKP +F ++ A+S S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 394 VEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVA 451
+++ ++ LM+ K + + + + + + A G++E + ++ DS E + VW
Sbjct: 230 IKKANVFYGLML-KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS-CVERNIEVWNT 287
Query: 452 LL 453
++
Sbjct: 288 MI 289
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 292/524 (55%), Gaps = 2/524 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LFEE+P + T+N++I Y + E + L+ +M + +P TF+ LKA V L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
+G+++ +V G+ D VG+ +L+ Y K ++ E + F++M D V ++ +I+
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
Q ++ ++ M+ G D ++ A+L + G +H ++ +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
+ V SLVDMYAK + A +FK++ + V+W ALISG+ Q GL G+ L+L +M+
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDF-NLVLGTSVIDMYSKCGVPSC 330
D + + L A A L LGK +H + +R + N+ G+ ++DMY+KCG
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
A +F++M R+ +SWN +I+++ +G GE A+ F +MIE+ ++PD + +L+A SH
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
G VE+G +F M Y I P +KHYACM+DLL R G EA K++D M EP +W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNP-DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
++L+ C HK S+ E+ A+K+ + D + +SN +A +WE+V V+K MR+
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEM 553
G+KKVP YS VEVN ++H F D++H ++IV + +L E+
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 21/484 (4%)
Query: 12 SVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKED 71
S +I+ + D+ SAR LF+ +P R V T+ ++ Y+R E L+ QM +
Sbjct: 81 STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 72 --VRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVF--VGSSMLNLYVKCGKM 127
PD TFT L C + ++ AV+LG+ + F V + +L Y + ++
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+ A V FE++ KD V ++++I G +G E++ + +M++ G + G+++A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 188 ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWG 247
L D G +H S+ + D V ++D Y+K + +F M ++ V++
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VR 306
+IS ++Q ++L EMQ GF+ + + L A + L++G+ +H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 307 RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY---GIHGHGEEAL 363
D L +G S++DMY+KC + A +F + R +SW +I+ Y G+HG G L
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---L 437
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
LF +M + ++ D STFA++L A + + G+ ++ ++ +VD+
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDM 496
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK-----LNPD 478
A+ G +++A+++ + M ++ W AL+S H GE K L PD
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVS-WNALISA---HADNGDGEAAIGAFAKMIESGLQPD 552
Query: 479 DLGI 482
+ I
Sbjct: 553 SVSI 556
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 175/363 (48%), Gaps = 13/363 (3%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVL 61
+ T S + +I+ Y + ++ R LF+E+P +YN +I +YS+ + L
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 62 GLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
+ +M + F L +L L+MG ++ +A+ + + VG+S++++Y
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 122 VKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMM 181
KC EA + F+ + ++ V W+++I+G V G + + +M+ + AD+
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 182 GLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
+++A A G +H + IR +V + LVDMYAK G + A VF+ M
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG---- 297
N V+W ALIS A NG + + +M G +PDSVS++ L AC+ GF++ G
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 298 ---KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASY 353
I+G T ++ + +L D+ + G + A L D+M D I W+ ++ +
Sbjct: 577 QAMSPIYGITPKKKHYACML-----DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Query: 354 GIH 356
IH
Sbjct: 632 RIH 634
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
N V ++I + K G S AR LFD M R +++W +++ Y + H +EA LF QM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 371 E--TMVKPDHSTFASLL 385
+ PDH TF +LL
Sbjct: 138 RSSSCTLPDHVTFTTLL 154
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 299/556 (53%), Gaps = 3/556 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+IK S++ + +IA+Y N + A ++F +P++ + +++SII +S+ FE
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA 253
Query: 61 LGLYNQMIKEDV-RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
L +M+ V P+ F +LKAC SL+ G +I ++ + G S+ +
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
+Y +CG +N A F++++R D W+ +I GL NG EAV + +M+ G D +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM- 238
+ L+ A G+ +H Y I+ D+ V SL+ MY L ++F++
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ + V+W +++ Q+ L L M EPD +++ + L C +I LKLG
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
+H Y+++ + +IDMY+KCG AR +FD M +RD++SW+ +I Y G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
GEEAL LF +M ++P+H TF +L+A SH GLVEEG + M +++ I PT++H
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNP 477
+C+VDLLARAG + EA + +D M EP + VW LLS C + +K A+ +LK++P
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 478 DDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHN 537
+ H L+ + A WE A +R +M+K +KK+PG S +E+ ++H F ED H
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 538 QYEDIVYVLKKLYLEM 553
+ +DI VL ++ +M
Sbjct: 734 ERDDIYTVLHNIWSQM 749
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 229/447 (51%), Gaps = 13/447 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+++YG + AR++F+ +P R + +Y S+I YS+ E + LY +M++ED+ PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F +KAC S D+ +G+++ + ++L + + ++++ +YV+ +M++A F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGI-DADEVVMMGLIQACADLGDSR 194
+ KDL+ WSS+I G G EA+ K M G+ +E + ++AC+ L
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+G +HG I+ L + SL DMYA+ G L+ A VF + R + +W +I+G A
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLV 313
NG A + + +M+S GF PD++SL S L A + L G IH Y ++ F +L
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ S++ MY+ C C LF+ ++ D +SWN I+ + H E L LF M+ +
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS 467
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQ----PTEKHYACMVDLLARAG 428
+PDH T +LL G VE V Y ++ P + ++D+ A+ G
Sbjct: 468 ECEPDHITMGNLL-----RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSG 455
+ +A +I DSM + W L+ G
Sbjct: 523 SLGQARRIFDSMDNR-DVVSWSTLIVG 548
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 210/455 (46%), Gaps = 46/455 (10%)
Query: 41 VDTYNSIIIAYSRKESPFEVLGLYNQMIKE--------------DVRPDSSTFTVALK-- 84
V NS I+A S S + L N I D +S+F + L+
Sbjct: 11 VSVSNSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTY 70
Query: 85 -----ACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
AC S L G +I + D + + +L++Y KCG + +A F+ M
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
++LV ++S+I G NGQ EA+ Y +M +E + D+ +I+ACA D G +
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLA 259
H I+ + + Q +L+ MY + + AS VF + ++++W ++I+GF+Q G
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 260 GSTLELLMEMQSCG-FEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTS 317
L L EM S G F P+ S+L AC+ + G IHG ++ N + G S
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPD 377
+ DMY++CG + AR +FDQ++ D SWNVIIA +G+ +EA+S+F QM + PD
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Query: 378 HSTFASLLSALS-----------HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
+ SLL A + HS +++ G + DL V + Y DL
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWG-FLADLTVCNSLL----TMYTFCSDLYCC 425
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
E+ DS+S W +L+ C H++
Sbjct: 426 FNLFEDFRNNADSVS-------WNTILTACLQHEQ 453
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 271/470 (57%), Gaps = 2/470 (0%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
D + LK C L G + ++ + +D+ +G+++LN+Y KCG + EA F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
EKM ++D V W+++I+G + +P +A+ + +M + G +E + +I+A A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +HG+ ++ + +V V ++L+D+Y + G +D A VF + N V+W ALI+G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
+ LEL M GF P S S AC+ GFL+ GK +H Y ++ + +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 315 -GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
G +++DMY+K G AR +FD++ RD++SWN ++ +Y HG G+EA+ F +M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
++P+ +F S+L+A SHSGL++EG ++++LM K I P HY +VDLL RAG++ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
L+ ++ M EP A+W ALL+ C HK +G A+ V +L+PDD G H ++ N +A
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
+W + A VRK M++SG+KK P S VE+ +H F+ D+ H Q E+I
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 178/349 (51%), Gaps = 6/349 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + ARK+FE++P R T+ ++I YS+ + P + L +NQM++ P+
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T + +KA + G ++ V+ G+ ++V VGS++L+LY + G M++A + F+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W+++I G +A++ ++ M ++G L AC+ G
Sbjct: 221 ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ 280
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G VH Y I+ L +L+DMYAK+G + A +F +++ ++V+W +L++ +AQ
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVLG 315
+G + EM+ G P+ +S +S L AC+ G L G H Y + + D +
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVPEA 398
Query: 316 ---TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGE 360
+V+D+ + G + A ++M + W ++ + +H + E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MIK+ + ++ +Y I ARK+F+ L R V ++NS++ AY++ E
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ + +M + +RP+ +F L AC L G + + G + + ++++L
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 121 YVKCGKMNEAMVAFEKMQ-RKDLVCWSSMING 151
+ G +N A+ E+M W +++N
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 306/566 (54%), Gaps = 7/566 (1%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G ++ LY DI +A F E + V +N +++AY + ++ QM E++
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
P+ T+ LK C+ L DL++GE+I + ++ + + +V S ++++Y K GK++ A
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 134 FEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDS 193
+ KD+V W++MI G +A+ +++M GI +DEV + + ACA L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
+ G +H + + D+ Q +LV +Y++ G ++ + F+ + + W AL+SGF
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
Q+G L + + M G + ++ + SA+ A ++ +K GK +H + +D
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+ ++I MY+KCG S A F ++ +++ +SWN II +Y HG G EAL F QMI +
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V+P+H T +LSA SH GLV++G +F+ M S+Y + P +HY C+VD+L RAG +
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M +P VW LLS C HK IGE A +L+L P+D + L+SN +A+
Sbjct: 848 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+KW+ R+ M++ G+KK PG S +EV +H+F + D++H ++I + L
Sbjct: 908 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 967
Query: 553 MRAISSWLQGHME-----EHEEHDPL 573
I ++Q +HE+ DP+
Sbjct: 968 ASEI-GYVQDCFSLLNELQHEQKDPI 992
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 229/457 (50%), Gaps = 4/457 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L + G ++ Y K D+ A K+F+E+P R + T+N +I + + EV
Sbjct: 111 ILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV 170
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVS-LMDLKMGEEIWRKAVELGYGNDVFVGSSMLN 119
GL+ +M+ E+V P+ TF+ L+AC + + E+I + + G + V + +++
Sbjct: 171 FGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVV 179
LY + G ++ A F+ ++ KD W +MI+GL N EA+ + M GI
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 180 MMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMS 239
++ AC + G +HG ++ + D V +LV +Y G+L A H+F NMS
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 240 RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
+ + VT+ LI+G +Q G +EL M G EPDS +L S ++AC+ G L G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+H YT + F N + +++++Y+KC A F + + +++ WNV++ +YG+
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
+ +F QM + P+ T+ S+L G +E G ++ K Q +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYVCS 529
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++D+ A+ G+++ A I+ + + + W +++G
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKD-VVSWTTMIAG 565
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 226/445 (50%), Gaps = 3/445 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++LY +++SA +F + R TYN++I S+ + + L+ +M + + PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S+T + AC + L G+++ +LG+ ++ + ++LNLY KC + A+ F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+ + +++V W+ M+ R + +++M+ E I ++ +++ C LGD
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H I+ + L+ V + L+DMYAK G LD A + + ++V+W +I+G+ Q
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT-VRRFDFNLVL 314
L +M G D V L +A+ ACA + LK G+ IH V F +L
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++ +YS+CG + F+Q ++ D I+WN +++ + G+ EEAL +F++M +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
++ TF S + A S + +++G+ ++ TE A ++ + A+ G + +A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-LISMYAKCGSISDAE 747
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNH 459
K +ST+ ++ W A+++ H
Sbjct: 748 KQFLEVSTKNEVS-WNAIINAYSKH 771
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 223/443 (50%), Gaps = 7/443 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I LY + AR++F+ L L+ ++ ++I S+ E E + L+ M + P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
F+ L AC + L++GE++ ++LG+ +D +V +++++LY G + A F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D V ++++INGL G +A++ +KRM +G++ D + L+ AC+ G
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G +H Y+ + + K++ +L+++YAK ++ A F N+V W ++ +
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVL 314
++ + +MQ P+ + S L C ++G L+LG+ IH ++ F N +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+ +IDMY+K G A + + +D++SW +IA Y + ++AL+ F QM++ +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWF-DLMVSKYKIQ-PTEKHYACMVDLLARAGEVEE 432
+ D + +SA + ++EG+ VS + P + +V L +R G++EE
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCGKIEE 644
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
+ + +A W AL+SG
Sbjct: 645 SYLAFEQTEAGDNIA-WNALVSG 666
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 202/401 (50%), Gaps = 25/401 (6%)
Query: 1 MIKTN--LSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPF 58
+IKTN L+AY SV +I +Y + +A + + V ++ ++I Y++
Sbjct: 516 IIKTNFQLNAYVCSV--LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L + QM+ +R D T A+ AC L LK G++I +A G+ +D+ ++++
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
LY +CGK+ E+ +AFE+ + D + W+++++G +G EA+ + RM +EGID +
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++A ++ + + G VH + + + +V +L+ MYAK G + A F +
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG- 297
S N V+W A+I+ ++++G L+ +M P+ V+LV L AC+ IG + G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 298 ------KSIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVII 350
S +G + + + V+DM ++ G+ S A+ +M + D + W ++
Sbjct: 814 AYFESMNSEYGLSPKPEHY-----VCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
Query: 351 ASYGIHGH---GEEALSLFLQMIETMVKPDHSTFASLLSAL 388
++ +H + GE A L++ +P+ S LLS L
Sbjct: 869 SACVVHKNMEIGEFAAHHLLEL-----EPEDSATYVLLSNL 904
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 168 MKKEGIDADEVVMMGLIQACADL-GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
++ GI + + L++ C G G +H ++ L+ + + L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
L A VF M I TW +I A L G L + M S P+ + L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 287 AC--AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDL 343
AC + F + + IH + + + V+ +ID+YS+ G AR +FD ++ +D
Sbjct: 195 ACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 344 ISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL 403
SW +I+ + EA+ LF M + P F+S+LSA +E G L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 404 MVSKYKIQPTEKHYAC--MVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK 461
++ K+ + Y C +V L G + A I +MS + + L++G +
Sbjct: 314 VL---KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-TYNTLINGL---SQ 366
Query: 462 FSIGEKVAKKVLKLNPDDL 480
GEK + +++ D L
Sbjct: 367 CGYGEKAMELFKRMHLDGL 385
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 298/541 (55%), Gaps = 3/541 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y + A +F + + ++ +N+++ AY+ + + L L+ M ++ V PD
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S T + + C L G+ + + + + + S++L LY KCG +A + F+
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE--GIDADEVVMMGLIQACADLGDS 193
M+ KD+V W S+I+GL NG+ +EA+ + MK + + D +M + ACA L
Sbjct: 433 SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
Query: 194 RFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
RFGL VHG I+ L L+V V +SL+D+Y+K G ++A VF +MS N+V W ++IS +
Sbjct: 493 RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNL 312
++N L +++L M S G PDSVS+ S L+A + L GKS+HGYT+R +
Sbjct: 553 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 612
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY KCG A +F +MQ + LI+WN++I YG HG ALSLF +M +
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKA 672
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
PD TF SL+SA +HSG VEEG+ F+ M Y I+P +HYA MVDLL RAG +EE
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + +M E ++W+ LLS H +G A+K+L++ P+ + + N +
Sbjct: 733 AYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYME 792
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
E A + M++ G+ K PG S +EV+ + F S +I VL +L
Sbjct: 793 AGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSN 852
Query: 553 M 553
M
Sbjct: 853 M 853
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 236/471 (50%), Gaps = 16/471 (3%)
Query: 27 VSARKLFEELPLR-GVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+ A ++F E+ + V +N +I+ + L LY V+ S++FT AL A
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGA 281
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C + G +I V++G ND +V +S+L++Y KCG + EA F + K L W
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
++M+ N A+D + M+++ + D + +I C+ LG +G SVH +
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 206 RHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLEL 265
R + ++++L+ +Y+K G A VFK+M ++V WG+LISG +NG L++
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 266 LMEMQ--SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMY 322
+M+ +PDS + S ACA + L+ G +HG ++ N+ +G+S+ID+Y
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 323 SKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFA 382
SKCG+P A +F M + ++++WN +I+ Y + E ++ LF M+ + PD +
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 383 SLLSALSHSGLVEEGRYWFDLMVSKYKIQ---PTEKHYA-CMVDLLARAGEVEEALKIVD 438
S+L A+S + + +G+ + Y ++ P++ H ++D+ + G + A I
Sbjct: 582 SVLVAISSTASLLKGK-----SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 439 SMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL--NPDDLGIHALVS 487
M L W ++ G +H + ++ K +PDD+ +L+S
Sbjct: 637 KMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 78 TFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKM 137
TF LKAC +L +L G+ I V LG+ D F+ +S++N+YVKCG ++ A+ F+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 138 QR-------KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
+ +D+ W+SMI+G + +E V ++RM G+ D + ++
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 191 GDSRF--GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM-SRINIVTWG 247
G+ R G +HG+ +R L+ D ++T+L+DMY K G A VF + + N+V W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 248 ALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR 307
+I GF +G+ S+L+L M ++ + S S AL AC+Q G+ IH V+
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 308 FDFN-LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLF 366
N + TS++ MYSKCG+ A +F + + L WN ++A+Y + +G AL LF
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 367 LQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLAR 426
M + V PD T ++++S S GL G+ + K IQ T + ++ L ++
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS-VHAELFKRPIQSTSTIESALLTLYSK 420
Query: 427 AGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDD 479
G +A + SM E + W +L+SG + KF K A KV DD
Sbjct: 421 CGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKF----KEALKVFGDMKDD 468
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 211/432 (48%), Gaps = 13/432 (3%)
Query: 39 RGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKM--GE 96
R V +NS+I Y + E +G + +M+ VRPD+ + ++ + + + G+
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 97 EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK-DLVCWSSMINGLVFN 155
+I + D F+ ++++++Y K G +A F +++ K ++V W+ MI G +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 156 GQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
G ++D Y K + G + AC+ +S FG +H ++ L+ D V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 216 TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFE 275
TSL+ MY+K G + A VF + + W A+++ +A+N S L+L M+
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 276 PDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARAL 334
PDS +L + + C+ +G GKS+H +R + ++++ +YSKCG A +
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 335 FDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI--ETMVKPDHSTFASLLSALSHSG 392
F M+ +D+++W +I+ +G +EAL +F M + +KPD S+ +A +
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG-- 488
Query: 393 LVEEGRYWFDLMVSKYKIQPTEKHY--ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+E R+ + S K + + ++DL ++ G E ALK+ SMSTE + W
Sbjct: 489 -LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWN 546
Query: 451 ALLSGCHNHKKF 462
+++S C++
Sbjct: 547 SMIS-CYSRNNL 557
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 325 bits (833), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/625 (29%), Positives = 319/625 (51%), Gaps = 71/625 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K+ G ++IA Y N A + + +P + +++S+I A ++ + +
Sbjct: 41 ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS 100
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+G++++M + PDS K C L K+G++I + G D FV SM ++
Sbjct: 101 IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 121 YVKCGKMNEAMVAFEKMQRKD-----------------------------------LVCW 145
Y++CG+M +A F++M KD +V W
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 146 SSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIR 205
+ +++G +G +EAV ++++ G D+V + ++ + D G +HGY I+
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 206 RHLNLDVKVQTSLVDMYAKTGHL-------------------------------DLASHV 234
+ L D V ++++DMY K+GH+ D A +
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 235 FK----NMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
F+ +N+V+W ++I+G AQNG LEL EMQ G +P+ V++ S L AC
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 291 IGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVI 349
I L G+S HG+ VR N+ +G+++IDMY+KCG + ++ +F+ M +++L+ WN +
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSL 460
Query: 350 IASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYK 409
+ + +HG +E +S+F ++ T +KPD +F SLLSA GL +EG +F +M +Y
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG 520
Query: 410 IQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVA 469
I+P +HY+CMV+LL RAG+++EA ++ M EP VW ALL+ C + E A
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAA 580
Query: 470 KKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAF 529
+K+ L P++ G + L+SN +A + W EV +R M G+KK PG S ++V ++
Sbjct: 581 EKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTL 640
Query: 530 IMEDKSHNQYEDIVYVLKKLYLEMR 554
+ DKSH Q + I + ++ EMR
Sbjct: 641 LAGDKSHPQIDQITEKMDEISKEMR 665
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 313/543 (57%), Gaps = 6/543 (1%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+IA+Y + A ++ ++ V T+NS+I Y + E L ++ MI + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
+ T + A L +L G E+ ++ G+ +++ VG++++++Y KC AF
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
+M KDL+ W+++I G N EA++ ++ + K+ ++ DE+++ +++A + L
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
+H + +R+ L LD +Q LVD+Y K ++ A+ VF+++ ++V+W ++IS A
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
NG +EL M G DSV+L+ L A A + L G+ IH Y +R+ F +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+V+DMY+ CG A+A+FD+++ + L+ + +I +YG+HG G+ A+ LF +M V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PDH +F +LL A SH+GL++EGR + +M +Y+++P +HY C+VD+L RA V EA
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAF 744
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
+ V M TEP VW ALL+ C +H + IGE A+++L+L P + G LVSN FA +
Sbjct: 745 EFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQG 804
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ----YEDIVYVLKKLY 550
+W +V VR M+ SGM+K PG S +E++G++H F DKSH + YE + V +KL
Sbjct: 805 RWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Query: 551 LEM 553
E+
Sbjct: 865 REV 867
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 197/379 (51%), Gaps = 3/379 (0%)
Query: 14 GRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
G+++ +YG + A K+F+E+P R +N++I AY P L LY M E V
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP 179
Query: 74 PDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVA 133
S+F LKAC L D++ G E+ V+LGY + F+ ++++++Y K ++ A
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 134 FEKMQRK-DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F+ Q K D V W+S+++ +G+ E ++ ++ M G + ++ + AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 193 SRFGLSVHGYSIRRHLN-LDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
++ G +H ++ + ++ V +L+ MY + G + A + + M+ ++VTW +LI
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDF 310
G+ QN + LE +M + G + D VS+ S + A ++ L G +H Y ++ +D
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMI 370
NL +G ++IDMYSKC + F +M +DLISW +IA Y + EAL LF +
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 371 ETMVKPDHSTFASLLSALS 389
+ ++ D S+L A S
Sbjct: 480 KKRMEIDEMILGSILRASS 498
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 251/490 (51%), Gaps = 6/490 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRG-VDTYNSIIIAYSRKESPFE 59
++K + G V ++++Y +D+ +AR+LF+ +G +NSI+ +YS E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 60 VLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELG-YGNDVFVGSSML 118
L L+ +M P+S T AL AC K+G+EI ++ + ++++V ++++
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
+Y +CGKM +A +M D+V W+S+I G V N +EA++ + M G +DEV
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
M +I A L + G+ +H Y I+ + +++V +L+DMY+K F M
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
++++W +I+G+AQN LEL ++ E D + L S L A + + + + K
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 299 SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IH + +R+ + V+ ++D+Y KC A +F+ ++ +D++SW +I+S ++G+
Sbjct: 508 EIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
EA+ LF +M+ET + D +LSA + + +GR ++ K A
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS--GCHNHKKFSIGEKVAKKVLKLN 476
+VD+ A G+++ A + D + + GL + ++++ G H K ++ + ++
Sbjct: 628 -VVDMYACCGDLQSAKAVFDRIERK-GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 477 PDDLGIHALV 486
PD + AL+
Sbjct: 686 PDHISFLALL 695
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 3/279 (1%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F+ ++ +Y KCG +++A F++M + W++MI V NG+P A+ Y M+ E
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLA 231
G+ L++ACA L D R G +H ++ + + +LV MYAK L A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 232 SHVFKNMS-RINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQ 290
+F + + V W +++S ++ +G + TLEL EM G P+S ++VSAL AC
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 291 IGFLKLGKSIHGYTVRRFDFN--LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
+ KLGK IH ++ + L + ++I MY++CG A + QM + D+++WN
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
+I Y + +EAL F MI K D + S+++A
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 288 CAQIGFLKLGKSIHGYTVRRF-DFNL-VLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
C + + G+ +H + F F L L ++ MY KCG A +FD+M R +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFA 149
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
WN +I +Y +G AL+L+ M V S+F +LL A + + G L+V
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLS 454
K T +V + A+ ++ A ++ D + +W ++LS
Sbjct: 210 -KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 283/496 (57%), Gaps = 7/496 (1%)
Query: 66 QMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG 125
+++ ++ P T+ + + C L + R ++ G D F+ + ++ +Y G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 126 KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQ 185
++ A F+K +++ + W+++ L G E + Y +M + G+++D +++
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 186 AC----ADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
AC + G +H + RR + V + T+LVDMYA+ G +D AS+VF M
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246
Query: 242 NIVTWGALISGFAQNGLAGSTLELLMEM--QSCGFEPDSVSLVSALLACAQIGFLKLGKS 299
N+V+W A+I+ +A+NG A L EM ++ P+SV++VS L ACA + L+ GK
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 300 IHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
IHGY +RR D L + ++++ MY +CG + +FD+M RD++SWN +I+SYG+HG+
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYA 418
G++A+ +F +M+ P TF S+L A SH GLVEEG+ F+ M + I+P +HYA
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 419 CMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPD 478
CMVDLL RA ++EA K+V M TEPG VW +LL C H + E+ ++++ L P
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 479 DLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQ 538
+ G + L+++ +A Q W+EV V+K + G++K+PG +EV ++++F+ D+ +
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPL 546
Query: 539 YEDIVYVLKKLYLEMR 554
E I L KL +M+
Sbjct: 547 MEQIHAFLVKLAEDMK 562
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 182/357 (50%), Gaps = 9/357 (2%)
Query: 15 RIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRP 74
++I +Y + ARK+F++ R + +N++ A + EVLGLY +M + V
Sbjct: 117 KLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176
Query: 75 DSSTFTVALKACV----SLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
D T+T LKACV ++ L G+EI GY + V++ ++++++Y + G ++ A
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDA--DEVVMMGLIQACA 188
F M +++V WS+MI NG+ EA+ ++ M +E D+ + V M+ ++QACA
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 189 DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGA 248
L G +HGY +RR L+ + V ++LV MY + G L++ VF M ++V+W +
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNS 356
Query: 249 LISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRF 308
LIS + +G +++ EM + G P V+ VS L AC+ G ++ GK + R
Sbjct: 357 LISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH 416
Query: 309 DFNLVLG--TSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEA 362
+ ++D+ + + A+ + D W ++ S IHG+ E A
Sbjct: 417 GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+++ L + + ++ +YG + +++F+ + R V ++NS+I +Y +
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMG----EEIWRKAVELGYGNDVFVGSS 116
+ ++ +M+ P TF L AC ++ G E +WR + G + +
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR---DHGIKPQIEHYAC 427
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKD-LVCWSSMINGLVFNGQPREAVDAYKRM-KKEGID 174
M++L + +++EA + M+ + W S++ +G A A +R+ E +
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 175 ADEVVMMGLIQACADLGD 192
A V++ I A A + D
Sbjct: 488 AGNYVLLADIYAEAQMWD 505
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 307/557 (55%), Gaps = 33/557 (5%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A KLF ++P V +N++I +S+ + E + LY M+KE V PDS TF L
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 89 LMD-LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSS 147
L G+++ V+ G G++++V ++++ +Y CG M+ A F++ ++D+ W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 148 MINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
MI+G + E+++ M++ + V ++ ++ AC+ + D VH Y
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNG---------- 257
++++ +LV+ YA G +D+A +F++M ++++W +++ G+ + G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 258 ------------------LAG---STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKL 296
AG +LE+ EMQS G PD ++VS L ACA +G L++
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 297 GKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGI 355
G+ I Y + + ++V+G ++IDMY KCG A+ +F M RD +W ++
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 356 HGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEK 415
+G G+EA+ +F QM + ++PD T+ +LSA +HSG+V++ R +F M S ++I+P+
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLV 506
Query: 416 HYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKL 475
HY CMVD+L RAG V+EA +I+ M P VW ALL H + E AKK+L+L
Sbjct: 507 HYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Query: 476 NPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKS 535
PD+ ++AL+ N +A ++W+++ VR+ + +KK PG+S++EVNG H F+ DKS
Sbjct: 567 EPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKS 626
Query: 536 HNQYEDIVYVLKKLYLE 552
H Q E+I L++L E
Sbjct: 627 HLQSEEIYMKLEELAQE 643
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 207/475 (43%), Gaps = 47/475 (9%)
Query: 55 ESPFEV-LGLYNQM----IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGN 109
+SPF L ++ + I E + D S F L C + K ++ +++ G
Sbjct: 8 KSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAP 64
Query: 110 DVFVGSSMLNLYVK--CGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKR 167
+ + + G ++ A F K+ D+V W++MI G E V Y
Sbjct: 65 NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 168 MKKEGIDADEVVMMGLIQACA-DLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
M KEG+ D L+ D G G +H + ++ L ++ VQ +LV MY+ G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
+D+A VF + ++ +W +ISG+ + ++ELL+EM+ P SV+L+ L
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 287 ACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSC--------------- 330
AC+++ L K +H Y + + +L L ++++ Y+ CG
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 331 ----------------ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
AR FDQM RD ISW ++I Y G E+L +F +M +
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
PD T S+L+A +H G +E G W + K KI+ ++D+ + G E+A
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKV--LKLNPDDLGIHALVS 487
K+ M W A++ G N+ + KV ++ + + PDD+ ++S
Sbjct: 424 KVFHDMDQRDKFT-WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
I+ Y + ++ AR F+++P+R ++ +I Y R E L ++ +M + PD
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
T L AC L L++GE I + NDV VG++++++Y KCG +A F
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
M ++D W++M+ GL NGQ +EA+ + +M+ I D++ +G++ AC +
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC-----NHS 482
Query: 196 GLSVHGYSIRRHLNLDVKVQTSL------VDMYAKTGHLDLASHVFKNMS-RINIVTWGA 248
G+ + D +++ SL VDM + G + A + + M N + WGA
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGA 542
Query: 249 LI 250
L+
Sbjct: 543 LL 544
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 292/524 (55%), Gaps = 1/524 (0%)
Query: 32 LFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVSLMD 91
LF + YNS+I + E L L+ + K + TF + LKAC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMING 151
K+G ++ V+ G+ +DV +S+L++Y G++N+A F+++ + +V W+++ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 152 LVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLD 211
+G+ REA+D +K+M + G+ D ++ ++ AC +GD G + Y + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 212 VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQS 271
V+T+LV++YAK G ++ A VF +M +IVTW +I G+A N +EL ++M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 272 CGFEPDSVSLVSALLACAQIGFLKLGK-SIHGYTVRRFDFNLVLGTSVIDMYSKCGVPSC 330
+PD S+V L +CA +G L LG+ I F NL + ++IDMY+KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 331 ARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSH 390
+F +M+ +D++ N I+ +GH + + ++F Q + + PD STF LL H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 391 SGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
+GL+++G +F+ + Y ++ T +HY CMVDL RAG +++A +++ M P VW
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 451 ALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSG 510
ALLSGC K + E V K+++ L P + G + +SN +++ +W+E A VR M K G
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 511 MKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMR 554
MKK+PGYS +E+ G++H F+ +DKSH + I L+ L EMR
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 230/480 (47%), Gaps = 59/480 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++++Y G + A KLF+E+P R V T+ ++ Y+ E + L+ +M++ V+PD
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S L ACV + DL GE I + E+ + FV ++++NLY KCGKM +A F+
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD--- 192
M KD+V WS+MI G N P+E ++ + +M +E + D+ ++G + +CA LG
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 193 SRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
+G+S+ I RH L ++ + +L+DMYAK G + VFK M +IV A IS
Sbjct: 332 GEWGISL----IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFN 311
G A+NG + + + + G PD + + L C G ++ G RF FN
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG--------LRF-FN 438
Query: 312 LVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIE 371
+ SC AL R + + ++ +G G ++A L M
Sbjct: 439 AI---------------SCVYAL-----KRTVEHYGCMVDLWGRAGMLDDAYRLICDM-- 476
Query: 372 TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQP-TEKHYACMVDLLARAGEV 430
++P+ + +LLS LV++ + ++ ++P +Y + ++ + G
Sbjct: 477 -PMRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRW 532
Query: 431 EEALKIVDSMSTE-----PGLAVWVALLSGCH----NHKKFSIGEKVAKKVLKLNPDDLG 481
+EA ++ D M+ + PG + W+ L H + K + +K+ K+ +DLG
Sbjct: 533 DEAAEVRDMMNKKGMKKIPGYS-WIELEGKVHEFLADDKSHPLSDKIYAKL-----EDLG 586
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 185/373 (49%), Gaps = 5/373 (1%)
Query: 109 NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRM 168
+D F+ + +L + + + + F Q ++ ++S+ING V N E +D + +
Sbjct: 43 HDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSI 102
Query: 169 KKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHL 228
+K G+ +++AC + G+ +H ++ N DV TSL+ +Y+ +G L
Sbjct: 103 RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162
Query: 229 DLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+ A +F + ++VTW AL SG+ +G ++L +M G +PDS +V L AC
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 289 AQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
+G L G+ I Y N + T+++++Y+KCG AR++FD M +D+++W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y + +E + LFLQM++ +KPD + LS+ + G ++ G W ++ +
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE-WGISLIDR 341
Query: 408 YKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC--HNHKKFSIG 465
++ ++D+ A+ G + ++ M E + + A +SG + H K S
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 466 EKVAKKVLKLNPD 478
+ L ++PD
Sbjct: 401 VFGQTEKLGISPD 413
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 322 bits (825), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 279/475 (58%), Gaps = 7/475 (1%)
Query: 75 DSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAF 134
DS+T++ +K C+S + G I R G+ +F+ + ++N+YVK +N+A F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++M +++++ W++MI+ ++A++ M ++ + + ++++C + D R
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+H I+ L DV V+++L+D++AK G + A VF M + + W ++I GFA
Sbjct: 180 M---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
QN + LEL M+ GF + +L S L AC + L+LG H + V+ +D +L+L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-YDQDLIL 295
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
+++DMY KCG A +F+QM+ RD+I+W+ +I+ +G+ +EAL LF +M +
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 375 KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEAL 434
KP++ T +L A SH+GL+E+G Y+F M Y I P +HY CM+DLL +AG++++A+
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 435 KIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQ 494
K+++ M EP W LL C + + E AKKV+ L+P+D G + L+SN +A Q
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Query: 495 KWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
KW+ V +R MR G+KK PG S +EVN ++HAFI+ D SH Q IV V KKL
Sbjct: 476 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ---IVEVSKKL 527
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 192/348 (55%), Gaps = 18/348 (5%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I +Y N + A +LF+++P R V ++ ++I AYS+ + + L L M++++V
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RP+ T++ L++C + D++M + ++ G +DVFV S++++++ K G+ +A+
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGD 192
F++M D + W+S+I G N + A++ +KRMK+ G A++ + +++AC L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 193 SRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISG 252
G+ H + ++ + D+ + +LVDMY K G L+ A VF M +++TW +ISG
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 253 FAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG-------KSIHGYTV 305
AQNG + L+L M+S G +P+ +++V L AC+ G L+ G K ++G
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 306 RRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSR-DLISWNVIIAS 352
R + +ID+ K G A L ++M+ D ++W ++ +
Sbjct: 394 VREHYG-----CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 309/562 (54%), Gaps = 2/562 (0%)
Query: 10 GNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK 69
G+ ++++Y A KLF + T+N +I Y + E L + +MI
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 70 EDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNE 129
V PD+ TF+ L + +L+ ++I + D+F+ S++++ Y KC ++
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 130 AMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACAD 189
A F + D+V +++MI+G + NG ++++ ++ + K I +E+ ++ ++
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 190 LGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGAL 249
L + G +HG+ I++ + + +++DMYAK G ++LA +F+ +S+ +IV+W ++
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 250 ISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-F 308
I+ AQ+ + +++ +M G D VS+ +AL ACA + GK+IHG+ ++
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 309 DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQ 368
++ +++IDMY+KCG A +F M+ ++++SWN IIA+ G HG +++L LF +
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 369 MIE-TMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARA 427
M+E + ++PD TF ++S+ H G V+EG +F M Y IQP ++HYAC+VDL RA
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 428 GEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVS 487
G + EA + V SM P VW LL C HK + E + K++ L+P + G + L+S
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS 753
Query: 488 NFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLK 547
N A ++WE V VR M++ ++K+PGYS +E+N H F+ D +H + I +L
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLN 813
Query: 548 KLYLEMRAISSWLQGHMEEHEE 569
L E+R Q ++ H E
Sbjct: 814 SLLGELRLEGYIPQPYLPLHPE 835
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 230/459 (50%), Gaps = 5/459 (1%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLR--GVDTYNSIIIAYSRKESPF 58
+I ++S + RI+ +Y K+F L LR + +NSII ++ R
Sbjct: 61 LIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN 120
Query: 59 EVLGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
+ L Y +M+ V PD STF +KACV+L + K + + LG + FV SS++
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
Y++ GK++ F+++ +KD V W+ M+NG G + + M+ + I + V
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ CA G+ +HG + ++ + ++ SL+ MY+K G D AS +F+ M
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
SR + VTW +ISG+ Q+GL +L EM S G PD+++ S L + ++ L+ K
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Query: 299 SIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHG 357
IH Y +R ++ L +++ID Y KC S A+ +F Q S D++ + +I+ Y +G
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Query: 358 HGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
++L +F +++ + P+ T S+L + ++ GR ++ K
Sbjct: 421 LYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
A ++D+ A+ G + A +I + +S + W ++++ C
Sbjct: 481 A-VIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRC 517
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 7/316 (2%)
Query: 79 FTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK-- 136
++ L+AC + L+ G+++ + D + +L +Y CG ++ F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 137 MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFG 196
++R + W+S+I+ V NG +A+ Y +M G+ D L++AC L + + G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-G 156
Query: 197 LSVHGYSIRRHLNLDVK--VQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
+ ++ L +D V +SL+ Y + G +D+ S +F + + + V W +++G+A
Sbjct: 157 IDFLSDTV-SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGY-TVRRFDFNLV 313
+ G S ++ M+ P++V+ L CA + LG +HG V DF
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
+ S++ MYSKCG A LF M D ++WN +I+ Y G EE+L+ F +MI +
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 374 VKPDHSTFASLLSALS 389
V PD TF+SLL ++S
Sbjct: 336 VLPDAITFSSLLPSVS 351
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 183 LIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFK--NMSR 240
L+QAC++ R G VH + I ++ D ++ MYA G +F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+I W ++IS F +NGL L +M G PD + + AC + K G
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDF 159
Query: 301 HGYTVRRF--DFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
TV D N + +S+I Y + G LFD++ +D + WNV++ Y G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 359 GEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDL-MVSKYKIQPTEKHY 417
+ + F M + P+ TF +LS + L++ G L +VS + + K+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 418 ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
++ + ++ G ++A K+ MS W ++SG
Sbjct: 280 --LLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 313/613 (51%), Gaps = 74/613 (12%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDT--YNSIIIAYSRKESPFEVLGLYNQMIKEDVR 73
+++ Y DI AR +FE+ P+ DT YN++I +S + + L+ +M E +
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 74 PDSSTFTVALKACVSLM--DLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK----M 127
PD+ TF L A ++L+ D K + A++ G G V ++++++Y KC +
Sbjct: 146 PDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQ------------------------------ 157
+ A F+++ KD W++M+ G V NG
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 158 --PREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQ 215
+EA++ +RM GI+ DE +I+ACA G + G VH Y +RR +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 216 TSLVDMYAK-------------------------------TGHLDLASHVFKNMSRINIV 244
SLV +Y K +GH+ A +FK M NI+
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 245 TWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYT 304
+W +ISG A+NG L+L M+ GFEP + A+ +CA +G G+ H
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 305 VR-RFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL 363
++ FD +L G ++I MY+KCGV AR +F M D +SWN +IA+ G HGHG EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 364 SLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDL 423
++ +M++ ++PD T ++L+A SH+GLV++GR +FD M + Y+I P HYA ++DL
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 424 LARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIH 483
L R+G+ +A +++S+ +P +W ALLSGC H +G A K+ L P+ G +
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTY 623
Query: 484 ALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIV 543
L+SN A +WEEVA VRK MR G+KK S +E+ ++H F+++D SH + E +
Sbjct: 624 MLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVY 683
Query: 544 YVLKKLYLEMRAI 556
L+ L EMR +
Sbjct: 684 IYLQDLGKEMRRL 696
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 65/296 (21%)
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKN--MSRINIVTWGALISGFAQNGLAGSTLELLME 268
D +T++V Y +G + LA VF+ + + V + A+I+GF+ N S + L +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 269 MQSCGFEPDSVSLVSALLA----------CAQIGFLKLGKSIHGYTVRRFDFNLVLGTSV 318
M+ GF+PD+ + S L C Q L KS GY + ++
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL-KSGAGYITS-------VSNAL 190
Query: 319 IDMYSKCG-VPS---CARALFDQMQSRD-------------------------------- 342
+ +YSKC PS AR +FD++ +D
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 343 LISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFD 402
L+++N +I+ Y G +EAL + +M+ + ++ D T+ S++ A + +GL++ G+
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK---- 306
Query: 403 LMVSKYKIQPTEKHY---ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
V Y ++ + + +V L + G+ +EA I + M + L W ALLSG
Sbjct: 307 -QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD-LVSWNALLSG 360
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 4 TNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGL 63
++LSA GN+ +I +Y + AR++F +P ++N++I A + E + +
Sbjct: 450 SSLSA-GNA---LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 64 YNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGY----GNDVFVGSSMLN 119
Y +M+K+ +RPD T L AC + G + + ++E Y G D + + +++
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF-DSMETVYRIPPGADHY--ARLID 562
Query: 120 LYVKCGKMNEAMVAFEKMQRKDLV-CWSSMINGLVFNGQ 157
L + GK ++A E + K W ++++G +G
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/509 (36%), Positives = 284/509 (55%), Gaps = 6/509 (1%)
Query: 20 YGGKNDIVSARKLFEELPL--RGVDTYNSIIIAYSRKESPF--EVLGLYNQMIKEDVRPD 75
Y N + A F +P R ++N+I+ YS+ ++ +VL LYN+M + D
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
S A+KACV L L+ G I A++ G D +V S++ +Y + G M A F+
Sbjct: 109 SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD 168
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++ V W ++ G + + E + M+ G+ D + ++ L++AC ++ +
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 196 GLSVHGYSIRRH-LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G VHG SIRR ++ +Q S++DMY K LD A +F+ N+V W LISGFA
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
+ A +L +M P+ +L + L++C+ +G L+ GKS+HGY +R + + V
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 314 LGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETM 373
TS IDMY++CG AR +FD M R++ISW+ +I ++GI+G EEAL F +M
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 374 VKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEA 433
V P+ TF SLLSA SHSG V+EG F+ M Y + P E+HYACMVDLL RAGE+ EA
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 434 LKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAME 493
+D+M +P + W ALLS C HK+ + ++A+K+L + P+ ++ L+SN +A
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Query: 494 QKWEEVAGVRKTMRKSGMKKVPGYSVVEV 522
WE V VR+ M G +K G S EV
Sbjct: 529 GMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 189/370 (51%), Gaps = 8/370 (2%)
Query: 92 LKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQ--RKDLVCWSSMI 149
L +++ K + G+ ++V +GSS+ N Y++ +++ A +F ++ +++ W++++
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 150 NGLVFNGQP--REAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRH 207
+G + + + Y RM++ D ++ I+AC LG G+ +HG +++
Sbjct: 80 SGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG 139
Query: 208 LNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLM 267
L+ D V SLV+MYA+ G ++ A VF + N V WG L+ G+ + L
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 268 EMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR--FDFNLVLGTSVIDMYSKC 325
M+ G D+++L+ + AC + K+GK +HG ++RR D + L S+IDMY KC
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 326 GVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLL 385
+ AR LF+ R+++ W +I+ + EA LF QM+ + P+ T A++L
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 386 SALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPG 445
+ S G + G+ M+ + I+ ++ +D+ AR G ++ A + D M E
Sbjct: 320 VSCSSLGSLRHGKSVHGYMI-RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERN 377
Query: 446 LAVWVALLSG 455
+ W ++++
Sbjct: 378 VISWSSMINA 387
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 199/379 (52%), Gaps = 10/379 (2%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
++ +Y + SA+K+F+E+P+R + ++ Y + EV L+ M + D
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALD 209
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDV-FVGSSMLNLYVKCGKMNEAMVAF 134
+ T +KAC ++ K+G+ + ++ + + ++ +S++++YVKC ++ A F
Sbjct: 210 ALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
E +++V W+++I+G + EA D +++M +E I ++ + ++ +C+ LG R
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G SVHGY IR + +D TS +DMYA+ G++ +A VF M N+++W ++I+ F
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLVL 314
NGL L+ +M+S P+SV+ VS L AC+ G +K G R D+ +V
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR--DYGVVP 447
Query: 315 G----TSVIDMYSKCGVPSCARALFDQMQSRDLIS-WNVIIASYGIHGHGEEALSLFLQM 369
++D+ + G A++ D M + + S W ++++ IH + A + ++
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 370 IETMVKPDHSTFASLLSAL 388
+ ++P+ S+ LLS +
Sbjct: 508 LS--MEPEKSSVYVLLSNI 524
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
MI+ + + I +Y +I AR +F+ +P R V +++S+I A+ E
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVG----SS 116
L +++M ++V P+S TF L AC ++K G W++ + V +
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG---WKQFESMTRDYGVVPEEEHYAC 454
Query: 117 MLNLYVKCGKMNEAMVAFEKMQRKDLV-CWSSMING 151
M++L + G++ EA + M K + W ++++
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 318 bits (816), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 296/555 (53%), Gaps = 34/555 (6%)
Query: 29 ARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKACVS 88
A +F+ + + +N++ ++ P L LY MI + P+S TF LK+C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 89 LMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEK------------ 136
K G++I ++LG D++V +S++++YV+ G++ +A F+K
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 137 -------------------MQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADE 177
+ KD+V W++MI+G G +EA++ +K M K + DE
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 178 VVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKN 237
M+ ++ ACA G G VH + ++K+ +L+D+Y+K G L+ A +F+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 238 MSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLG 297
+ ++++W LI G+ L L L EM G P+ V+++S L ACA +G + +G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 298 KSIHGYTVRRFD---FNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYG 354
+ IH Y +R L TS+IDMY+KCG A +F+ + + L SWN +I +
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 355 IHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTE 414
+HG + + LF +M + ++PD TF LLSA SHSG+++ GR+ F M YK+ P
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 415 KHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLK 474
+HY CM+DLL +G +EA ++++ M EP +W +LL C H +GE A+ ++K
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 475 LNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK 534
+ P++ G + L+SN +A +W EVA R + GMKKVPG S +E++ +H FI+ DK
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 535 SHNQYEDIVYVLKKL 549
H + +I +L+++
Sbjct: 627 FHPRNREIYGMLEEM 641
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 168/287 (58%), Gaps = 2/287 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y + I +A+KLF+E+P++ V ++N++I Y+ + E L L+ M+K +VRPD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
ST + AC +++G ++ + G+G+++ + +++++LY KCG++ A FE
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ KD++ W+++I G +EA+ ++ M + G ++V M+ ++ ACA LG
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 196 GLSVHGYSIRRHLNLD--VKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGF 253
G +H Y +R + ++TSL+DMYAK G ++ A VF ++ ++ +W A+I GF
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 254 AQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
A +G A ++ +L M+ G +PD ++ V L AC+ G L LG+ I
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 216/446 (48%), Gaps = 48/446 (10%)
Query: 83 LKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGK---MNEAMVAFEKMQR 139
L C +L L++ I + +++G N + S ++ + + A+ F+ +Q
Sbjct: 40 LHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSV 199
+L+ W++M G + P A+ Y M G+ + ++++CA + G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 200 HGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVF------------------------ 235
HG+ ++ +LD+ V TSL+ MY + G L+ A VF
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 236 KNMSRI-------NIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLAC 288
+N ++ ++V+W A+ISG+A+ G LEL +M PD ++V+ + AC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 289 AQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWN 347
AQ G ++LG+ +H + F NL + ++ID+YSKCG A LF+++ +D+ISWN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 348 VIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSK 407
+I Y +EAL LF +M+ + P+ T S+L A +H G ++ GR W + + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR-WIHVYIDK 395
Query: 408 Y--KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKK---- 461
+ ++D+ A+ G++E A ++ +S+ L+ W A++ G H +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAS 454
Query: 462 FSIGEKVAKKVLKLNPDDLGIHALVS 487
F + ++ K + + PDD+ L+S
Sbjct: 455 FDLFSRMRK--IGIQPDDITFVGLLS 478
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V +I LY ++ +A LFE LP + V ++N++I Y+ E L L+ +M++
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 73 RPDSSTFTVALKACVSLMDLKMGE--EIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
P+ T L AC L + +G ++ G N + +S++++Y KCG + A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F + K L W++MI G +G+ + D + RM+K GI D++ +GL+ AC
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC--- 480
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVT----- 245
+ +G LDL H+F+ M++ +T
Sbjct: 481 --------------------------------SHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 246 WGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSI 300
+G +I +GL E++ M+ EPD V S L AC G ++LG+S
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEM---EPDGVIWCSLLKACKMHGNVELGESF 560
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 293/531 (55%), Gaps = 11/531 (2%)
Query: 25 DIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALK 84
DI AR++F+ + R + T+NS+I + E + +Y MI +V PD T + K
Sbjct: 114 DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFK 173
Query: 85 ACVSLMDLKMGEEIWRK---AVELGYG-NDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRK 140
A DL + +E R AV LG ++VFVGS+++++YVK GK EA + ++++ K
Sbjct: 174 A---FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 141 DLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVH 200
D+V +++I G G+ EAV A++ M E + +E ++ +C +L D G +H
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 201 GYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G ++ + QTSL+ MY + +D + VFK + N V+W +LISG QNG
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 261 STLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVI 319
L +M +P+S +L SAL C+ + + G+ IHG + FD + G+ +I
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLI 410
Query: 320 DMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHS 379
D+Y KCG AR +FD + D+IS N +I SY +G G EAL LF +MI ++P+
Sbjct: 411 DLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 380 TFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDS 439
T S+L A ++S LVEEG FD K KI T HYACMVDLL RAG +EEA +++ +
Sbjct: 471 TVLSVLLACNNSRLVEEGCELFD-SFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTT 528
Query: 440 MSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEV 499
P L +W LLS C H+K + E++ +K+L++ P D G L+SN +A KW V
Sbjct: 529 EVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 500 AGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDK-SHNQYEDIVYVLKKL 549
++ M+ +KK P S VE+N E H F+ D SH E I+ L++L
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 203/420 (48%), Gaps = 9/420 (2%)
Query: 68 IKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKM 127
I D + F+ L+ C+ + + I ++ G+ ++ GS +++ +KCG +
Sbjct: 57 ITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDI 115
Query: 128 NEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQAC 187
+ A F+ M + +V W+S+I L+ + + +EAV+ Y+ M + DE + + +A
Sbjct: 116 DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAF 175
Query: 188 ADLGDSRFGLSVHGYSIRRHLNL-DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTW 246
+DL + HG ++ L + +V V ++LVDMY K G A V + ++V
Sbjct: 176 SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 235
Query: 247 GALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR 306
ALI G++Q G ++ M +P+ + S L++C + + GK IHG V+
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 307 R-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSL 365
F+ L TS++ MY +C + + +F ++ + +SW +I+ +G E AL
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 366 FLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLA 425
F +M+ +KP+ T +S L S+ + EEGR + V+KY + + ++DL
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI-VTKYGFDRDKYAGSGLIDLYG 414
Query: 426 RAGEVEEALKIVDSMSTEPGLAVWVALLSGCHN---HKKFSIGEKVAKKVLKLNPDDLGI 482
+ G + A + D++S +++ + S N + + E++ L L P+D+ +
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN--LGLQPNDVTV 472
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 294/536 (54%), Gaps = 5/536 (0%)
Query: 26 IVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTFTVALKA 85
+++A KLF +P + + ++ +++ Y + E + L+ M K ++PD + L +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 86 CVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCW 145
C SL L G ++ ++ GND +V +S++++Y KC + +A F+ D+V +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 146 SSMINGLVFNG---QPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGY 202
++MI G G + EA++ ++ M+ I + + L++A A L +HG
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 203 SIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGST 262
+ LNLD+ ++L+D+Y+ L + VF M ++V W ++ +G+ Q
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 263 LELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDM 321
L L +E+Q PD + + + A + ++LG+ H ++R + N + +++DM
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 322 YSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTF 381
Y+KCG P A FD SRD++ WN +I+SY HG G++AL + +M+ ++P++ TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 382 ASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMS 441
+LSA SH+GLVE+G F+LM+ ++ I+P +HY CMV LL RAG + +A ++++ M
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 442 TEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAG 501
T+P VW +LLSGC + E A+ + +P D G ++SN +A + W E
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 502 VRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLEMRAIS 557
VR+ M+ G+ K PG S + +N E+H F+ +DKSH + I VL L +++R +S
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGVS 834
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 230/451 (50%), Gaps = 17/451 (3%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQM--IKEDVR 73
+I LY +V ARK+FE++P R + ++++++ A + E L ++ + ++D
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-S 143
Query: 74 PDSSTFTVALKACVSL--MDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAM 131
P+ + ++AC L M ++ V+ G+ DV+VG+ +++ Y+K G ++ A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 132 VAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLG 191
+ F+ + K V W++MI+G V G+ ++ + ++ ++ + D ++ ++ AC+ L
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 192 DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALIS 251
G +H + +R L +D + L+D Y K G + A +F M NI++W L+S
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 252 GFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDF 310
G+ QN L +EL M G +PD + S L +CA + L G +H YT++
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 311 NLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASY---GIHGHGEEALSLFL 367
+ + S+IDMY+KC + AR +FD + D++ +N +I Y G EAL++F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 368 QMIETMVKPDHSTFASLLSA---LSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLL 424
M +++P TF SLL A L+ GL ++ ++ KY + + ++D+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----IHGLMFKYGLNLDIFAGSALIDVY 499
Query: 425 ARAGEVEEALKIVDSMSTEPGLAVWVALLSG 455
+ ++++ + D M + L +W ++ +G
Sbjct: 500 SNCYCLKDSRLVFDEMKVKD-LVIWNSMFAG 529
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 183/373 (49%), Gaps = 19/373 (5%)
Query: 2 IKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV- 60
IK NL +I +Y + + ARK+F+ V +N++I YSR + +E+
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 61 --LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSML 118
L ++ M +RP TF L+A SL L + ++I + G D+F GS+++
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 119 NLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEV 178
++Y C + ++ + F++M+ KDLV W+SM G V + EA++ + ++ DE
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 179 VMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNM 238
++ A +L + G H ++R L + + +L+DMYAK G + A F +
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 239 SRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ ++V W ++IS +A +G L++L +M S G EP+ ++ V L AC+ G ++ G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG- 675
Query: 299 SIHGYTVRRFDFNLVLG--------TSVIDMYSKCGVPSCARALFDQMQSRD-LISWNVI 349
+++F+ L G ++ + + G + AR L ++M ++ I W +
Sbjct: 676 ------LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 350 IASYGIHGHGEEA 362
++ G+ E A
Sbjct: 730 LSGCAKAGNVELA 742
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 174/337 (51%), Gaps = 13/337 (3%)
Query: 110 DVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMK 169
D ++ + ++NLY + G M A FEKM ++LV WS+M++ +G E++ +
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 170 KEGIDA-DEVVMMGLIQACADL-GDSRFGL-SVHGYSIRRHLNLDVKVQTSLVDMYAKTG 226
+ D+ +E ++ IQAC+ L G R+ + + + ++ + DV V T L+D Y K G
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 227 HLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALL 286
++D A VF + + VTW +ISG + G + +L+L ++ PD L + L
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 287 ACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLIS 345
AC+ + FL+ GK IH + +R + + L +ID Y KCG A LF+ M ++++IS
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +++ Y + +EA+ LF M + +KPD +S+L+ S + L G F V
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT--SCASLHALG---FGTQV 372
Query: 406 SKYKIQPT--EKHYAC--MVDLLARAGEVEEALKIVD 438
Y I+ Y ++D+ A+ + +A K+ D
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
VHG I L LD + L+++Y++ G + A VF+ M N+V+W ++S +G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 259 AGSTLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGK----SIHGYTVRR-FDFNL 312
+L + +E ++ P+ L S + AC+ G G+ + + V+ FD ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+GT +ID Y K G AR +FD + + ++W +I+ G +L LF Q++E
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
V PD +++LSA S +E G+ + +Y ++ ++D + G V
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQ-IHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 433 ALKIVDSMSTEPGLAVWVALLSG 455
A K+ + M + + W LLSG
Sbjct: 303 AHKLFNGMPNK-NIISWTTLLSG 324
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 300 IHG-YTVRRFDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGH 358
+HG V + + L +I++YS+ G AR +F++M R+L+SW+ ++++ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 359 GEEALSLFLQMIETMV-KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHY 417
EE+L +FL+ T P+ +S + A SGL GR W + + ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR-WMVFQLQSFLVKSGFDRD 182
Query: 418 ----ACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGC 456
++D + G ++ A + D++ E W ++SGC
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
++K L ++ +Y A K F+ R V +NS+I +Y+ +
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
L + +M+ E + P+ TF L AC ++ G + + + G + M++L
Sbjct: 641 LQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSL 700
Query: 121 YVKCGKMNEAMVAFEKMQRKD-LVCWSSMING 151
+ G++N+A EKM K + W S+++G
Sbjct: 701 LGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 289/543 (53%), Gaps = 3/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I +Y + SAR + P R V ++ S+I ++ L + +M +E V P+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFE 135
TF A KA SL G++I AV+ G DVFVG S ++Y K ++A F+
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFD 167
Query: 136 KMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRF 195
++ ++L W++ I+ V +G+PREA++A+ ++ + + + AC+D
Sbjct: 168 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 196 GLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQ 255
G+ +HG +R + DV V L+D Y K + + +F M N V+W +L++ + Q
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 256 NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVL 314
N L + + E + S L ACA + L+LG+SIH + V+ + + +
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 315 GTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMV 374
G++++DMY KCG + FD+M ++L++ N +I Y G + AL+LF +M
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 375 --KPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
P++ TF SLLSA S +G VE G FD M S Y I+P +HY+C+VD+L RAG VE
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 467
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAM 492
A + + M +P ++VW AL + C H K +G A+ + KL+P D G H L+SN FA
Sbjct: 468 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 493 EQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYLE 552
+W E VR+ ++ G+KK GYS + V ++HAF +D+SH ++I L KL E
Sbjct: 528 AGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE 587
Query: 553 MRA 555
M A
Sbjct: 588 MEA 590
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 83 LKACVSLMDLKMGEEIWRKAVE-LGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQRKD 141
LK +S +++G + + V+ L F+ + ++N+Y K A + ++
Sbjct: 13 LKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72
Query: 142 LVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHG 201
+V W+S+I+GL NG A+ + M++EG+ ++ +A A L G +H
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 202 YSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGS 261
+++ LDV V S DMY KT D A +F + N+ TW A IS +G
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 262 TLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVID 320
+E +E + P+S++ + L AC+ L LG +HG +R FD ++ + +ID
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 321 MYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHST 380
Y KC + +F +M +++ +SW ++A+Y + E+A L+L+ + +V+
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 381 FASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSM 440
+S+LSA + +E GR V K ++ T + +VD+ + G +E++ + D M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 441 STEPGLAVWVALLSG 455
E L +L+ G
Sbjct: 372 -PEKNLVTRNSLIGG 385
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/572 (31%), Positives = 307/572 (53%), Gaps = 42/572 (7%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIK-EDVRP 74
++ Y ++ SARK+F+E+ R V ++ S+I Y+R++ + + L+ +M++ E+V P
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 75 DSSTFTVALKACVSLMDLKMGEEIW----RKAVELGYGNDVFVGSSMLNLYVKCGKMNEA 130
+S T + AC L DL+ GE+++ +E+ ND+ V S+++++Y+KC ++ A
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV---NDLMV-SALVDMYMKCNAIDVA 290
Query: 131 MVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADL 190
F++ +L ++M + V G REA+ + M G+ D + M+ I +C+ L
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 191 GDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK-------------------------- 224
+ +G S HGY +R + +L+DMY K
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 225 -----TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSC-GFEPDS 278
G +D A F+ M NIV+W +ISG Q L +E+ MQS G D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 279 VSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQ 337
V+++S AC +G L L K I+ Y + ++ LGT+++DM+S+CG P A ++F+
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 530
Query: 338 MQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEG 397
+ +RD+ +W I + + G+ E A+ LF MIE +KPD F L+A SH GLV++G
Sbjct: 531 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 590
Query: 398 RYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCH 457
+ F M+ + + P + HY CMVDLL RAG +EEA+++++ M EP +W +LL+ C
Sbjct: 591 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 650
Query: 458 NHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKSGMKKVPGY 517
+ A+K+ L P+ G + L+SN +A +W ++A VR +M++ G++K PG
Sbjct: 651 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 710
Query: 518 SVVEVNGELHAFIMEDKSHNQYEDIVYVLKKL 549
S +++ G+ H F D+SH + +I +L ++
Sbjct: 711 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 226/465 (48%), Gaps = 37/465 (7%)
Query: 21 GGKNDIVSARKLFEELPLRGVD-TYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPDSSTF 79
G + + A+++FE G YNS+I Y+ E + L+ +M+ + PD TF
Sbjct: 78 GTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 137
Query: 80 TVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMVAFEKMQR 139
L AC G +I V++GY D+FV +S+++ Y +CG+++ A F++M
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 140 KDLVCWSSMINGLVFNGQPREAVDAYKRM-KKEGIDADEVVMMGLIQACADLGDSRFGLS 198
+++V W+SMI G ++AVD + RM + E + + V M+ +I ACA L D G
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 199 VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGL 258
V+ + + ++ + ++LVDMY K +D+A +F N+ A+ S + + GL
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 259 AGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTS 317
L + M G PD +S++SA+ +C+Q+ + GKS HGY +R F+ + +
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 318 VIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEAL-------------- 363
+IDMY KC A +FD+M ++ +++WN I+A Y +G + A
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 364 ----------SLFLQMIETM--------VKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
SLF + IE V D T S+ SA H G ++ + W +
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK-WIYYYI 496
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWV 450
K IQ + +VD+ +R G+ E A+ I +S+ T ++ W
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL-TNRDVSAWT 540
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 190/391 (48%), Gaps = 47/391 (12%)
Query: 13 VGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDV 72
V ++ +Y N I A++LF+E +D N++ Y R+ E LG++N M+ V
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 73 RPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCGKMNEAMV 132
RPD + A+ +C L ++ G+ + G+ + + ++++++Y+KC + + A
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 133 AFEKMQRKDLVCWSSMINGLVFNGQ-----------P--------------------REA 161
F++M K +V W+S++ G V NG+ P EA
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 162 VDAYKRMK-KEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVD 220
++ + M+ +EG++AD V MM + AC LG ++ Y + + LDV++ T+LVD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 221 MYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVS 280
M+++ G + A +F +++ ++ W A I A G A +EL +M G +PD V+
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 281 LVSALLACAQIGFLKLGKSI-------HGYTVRRFDFNLVLGTSVIDMYSKCGVPSCARA 333
V AL AC+ G ++ GK I HG + + ++D+ + G+ A
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-----CMVDLLGRAGLLEEAVQ 628
Query: 334 LFDQ--MQSRDLISWNVIIASYGIHGHGEEA 362
L + M+ D+I WN ++A+ + G+ E A
Sbjct: 629 LIEDMPMEPNDVI-WNSLLAACRVQGNVEMA 658
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 302/575 (52%), Gaps = 39/575 (6%)
Query: 3 KTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLG 62
+ NL ++ N ++ Y I FE+LP R T+N +I YS +
Sbjct: 69 QPNLFSWNN----LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVK 124
Query: 63 LYNQMIKE-DVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLY 121
YN M+++ T LK S + +G++I + ++LG+ + + VGS +L +Y
Sbjct: 125 AYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMY 184
Query: 122 -------------------------------VKCGKMNEAMVAFEKMQRKDLVCWSSMIN 150
+ CG + +A+ F M+ KD V W++MI
Sbjct: 185 ANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIK 243
Query: 151 GLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL 210
GL NG +EA++ ++ MK +G+ D+ ++ AC LG G +H IR +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 211 DVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAGSTLELLMEMQ 270
+ V ++L+DMY K L A VF M + N+V+W A++ G+ Q G A +++ ++MQ
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFDFNLV-LGTSVIDMYSKCGVPS 329
G +PD +L A+ ACA + L+ G HG + + V + S++ +Y KCG
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
+ LF++M RD +SW ++++Y G E + LF +M++ +KPD T ++SA S
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
+GLVE+G+ +F LM S+Y I P+ HY+CM+DL +R+G +EEA++ ++ M P W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
LLS C N IG+ A+ +++L+P + L+S+ +A + KW+ VA +R+ MR+
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 510 GMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVY 544
+KK PG S ++ G+LH+F +D+S + Y D +Y
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDES-SPYLDQIY 637
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 33/298 (11%)
Query: 1 MIKTNLSAYGNSVGRIIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEV 60
+I+TN + +I +Y + A+ +F+ + + V ++ ++++ Y + E
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 61 LGLYNQMIKEDVRPDSSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNL 120
+ ++ M + + PD T A+ AC ++ L+ G + KA+ G + V V +S++ L
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 121 YVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVM 180
Y KCG ++++ F +M +D V W++M++ G+ E + + +M + G+ D V +
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 181 MGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
G+I AC SR GL G +R+ K+ TS + GH
Sbjct: 476 TGVISAC-----SRAGLVEKG---QRYF----KLMTSEYGIVPSIGH------------- 510
Query: 241 INIVTWGALISGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGK 298
+ +I F+++G + + M F PD++ + L AC G L++GK
Sbjct: 511 -----YSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGK 560
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 41/249 (16%)
Query: 184 IQACADLG---DSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSR 240
I+ C LG SR+ +HG IR + + ++V YA A VF + +
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 241 INIVTWGALISGFAQNGLA--------------GSTLELLME------------------ 268
N+ +W L+ +++ GL G T +L+E
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 269 MQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVR-RFDFNLVLGTSVIDMYSKCGV 327
M+ V+L++ L + G + LGK IHG ++ F+ L++G+ ++ MY+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 328 PSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSA 387
S A+ +F + R+ + +N ++ G E+AL LF M + D ++A+++
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKG 244
Query: 388 LSHSGLVEE 396
L+ +GL +E
Sbjct: 245 LAQNGLAKE 253
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 289/543 (53%), Gaps = 5/543 (0%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+I Y K + AR LF+E+P R V + ++I Y+ +++M+K+ P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG-KMNEAMVAF 134
T + LK+C ++ L G + V+LG ++V ++M+N+Y C M A + F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 135 EKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEGIDADEVVMMGLIQACADLGDSR 194
++ K+ V W+++I G G + YK+M E + + ++A A +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVT 230
Query: 195 FGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALISGFA 254
G +H I+R ++ V S++D+Y + G+L A H F M +++TW LIS
Sbjct: 231 TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE 290
Query: 255 QNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLV 313
++ + L + +S GF P+ + S + ACA I L G+ +HG RR F+ N+
Sbjct: 291 RSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349
Query: 314 LGTSVIDMYSKCG-VPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
L ++IDMY+KCG +P R + + R+L+SW ++ YG HG+G EA+ LF +M+ +
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 373 MVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEE 432
++PD F ++LSA H+GLVE+G +F++M S+Y I P Y C+VDLL RAG++ E
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 433 ALKIVDSMSTEPGLAVWVALLSGCHNHKKFS-IGEKVAKKVLKLNPDDLGIHALVSNFFA 491
A ++V+ M +P + W A+L C HK I A+KV++L P +G + ++S +A
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYA 529
Query: 492 MEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKKLYL 551
E KW + A VRK MR G KK G S + V ++ +F + DK + VL L
Sbjct: 530 AEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIE 589
Query: 552 EMR 554
E R
Sbjct: 590 ETR 592
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
Query: 113 VGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKEG 172
+ ++++ Y + G + EA F++M +D+V W++MI G + A + + M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 173 IDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAKTG-HLDLA 231
+E + ++++C ++ +G VHG ++ + + V ++++MYA ++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 232 SHVFKNMSRINIVTWGALISGFAQ--NGLAGSTLELLMEMQSCGFEPDSVSLVSALLACA 289
+F+++ N VTW LI+GF +G+ G + M +++ P +++ A+ A A
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASA 224
Query: 290 QIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNV 348
I + GK IH ++R F NL + S++D+Y +CG S A+ F +M+ +DLI+WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 349 IIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKY 408
+I+ EAL +F + P+ TF SL++A ++ + G+ + +
Sbjct: 285 LISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 409 KIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKV 468
+ E A ++D+ A+ G + ++ ++ + L W +++ G +H + ++
Sbjct: 344 FNKNVELANA-LIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 469 AKKVLK--LNPDDLGIHALVS 487
K++ + PD + A++S
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLS 423
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 313 VLGTSVIDMYSKCGVPSCARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIET 372
+L T++I Y + G+ AR+LFD+M RD+++W +I Y + A F +M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 373 MVKPDHSTFASLL-----------SALSHSGLVE---EGRYWFD-LMVSKYKIQPTEKHY 417
P+ T +S+L AL H +V+ EG + D M++ Y
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 418 ACMV 421
AC++
Sbjct: 166 ACLI 169
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 315 bits (808), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 317/608 (52%), Gaps = 67/608 (11%)
Query: 16 IIALYGGKNDIVSARKLFEELPLRGVDTYNSIIIAYSRKESPFEVLGLYNQMIKEDVRPD 75
+++ Y + D+ S + F++LP R ++ ++I+ Y + + + M+KE + P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 76 SSTFTVALKACVSLMDLKMGEEIWRKAVELGYGNDVFVGSSMLNLYVKCG---------- 125
T T L + + ++ G+++ V+LG +V V +S+LN+Y KCG
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 126 ---------------------KMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDA 164
+M+ AM FE+M +D+V W+SMI+G G A+D
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 165 YKRMKKEGI-DADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNL------------- 210
+ +M ++ + D + ++ ACA+L G +H + + ++
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 211 ------------------DVKVQ--TSLVDMYAKTGHLDLASHVFKNMSRINIVTWGALI 250
D+K++ T+L+D Y K G ++ A ++F ++ ++V W A+I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 251 SGFAQNGLAGSTLELLMEMQSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRRFD- 309
G+ Q+G G + L M G P+S +L + L + + L GK IHG V+ +
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 310 FNLVLGTSVIDMYSKCGVPSCARALFDQMQ-SRDLISWNVIIASYGIHGHGEEALSLFLQ 368
+++ + ++I MY+K G + A FD ++ RD +SW +I + HGH EEAL LF
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 369 MIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAG 428
M+ ++PDH T+ + SA +H+GLV +GR +FD+M KI PT HYACMVDL RAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 429 EVEEALKIVDSMSTEPGLAVWVALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSN 488
++EA + ++ M EP + W +LLS C HK +G+ A+++L L P++ G ++ ++N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 489 FFAMEQKWEEVAGVRKTMRKSGMKKVPGYSVVEVNGELHAFIMEDKSHNQYEDIVYVLKK 548
++ KWEE A +RK+M+ +KK G+S +EV ++H F +ED +H + +I +KK
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 549 LYLEMRAI 556
++ E++ +
Sbjct: 686 IWDEIKKM 693
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 181/414 (43%), Gaps = 67/414 (16%)
Query: 112 FVGSSMLNLYVKCGKMNEAMVAFEKMQRKDLVCWSSMINGLVFNGQPREAVDAYKRMKKE 171
F +++L+ Y K G M+ F+++ ++D V W++MI G GQ +A+ M KE
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 172 GIDADEVVMMGLIQACADLGDSRFGLSVHGYSIRRHLNLDVKVQTSLVDMYAK------- 224
GI+ + + ++ + A G VH + ++ L +V V SL++MYAK
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 225 ------------------------TGHLDLASHVFKNMSRINIVTWGALISGFAQNGLAG 260
G +DLA F+ M+ +IVTW ++ISGF Q G
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 261 STLELLMEM-QSCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSV 318
L++ +M + PD +L S L ACA + L +GK IH + V FD + ++ ++
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 319 IDMYSKCGVPSCARALFDQ---------------------------------MQSRDLIS 345
I MYS+CG AR L +Q ++ RD+++
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 346 WNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALSHSGLVEEGRYWFDLMV 405
W +I Y HG EA++LF M+ +P+ T A++LS S + G+ V
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 406 SKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVWVALLSGCHNH 459
+I A ++ + A+AG + A + D + E W +++ H
Sbjct: 441 KSGEIYSVSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 73/373 (19%)
Query: 183 LIQACADLGDSRFGLS-VHGYSIRRHLNLDVKVQTSLVDMYAKTGHLDLASHVFKNMSRI 241
L+Q + + RF VH I+ L V + +L+++Y+KTG+ A +F M
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 242 NIVTWGALISGFAQNGLAGSTLE-------------------------------LLMEMQ 270
+W ++S +++ G ST E ++ +M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 271 SCGFEPDSVSLVSALLACAQIGFLKLGKSIHGYTVRR-FDFNLVLGTSVIDMYSKCGVPS 329
G EP +L + L + A ++ GK +H + V+ N+ + S+++MY+KCG P
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 330 CARALFDQMQSRDLISWNVIIASYGIHGHGEEALSLFLQMIETMVKPDHSTFASLLSALS 389
A+ +FD+M RD+ SWN +IA + G + A++ F QM E D T+ S++S +
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFN 254
Query: 390 HSGLVEEGRYWFDLMVSKYKIQPTEKHYACMVDLLARAGEVEEALKIVDSMSTEPGLAVW 449
G +DL +D+ ++ + DS+ + P
Sbjct: 255 QRG--------YDLRA---------------LDIFSKM--------LRDSLLS-PDRFTL 282
Query: 450 VALLSGCHNHKKFSIGEKVAKKVLKLNPDDLGIHALVSNFFAMEQKWEEVAGVRKTMRKS 509
++LS C N +K IG+++ ++ D GI +++ +M + V R+ + +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGI--VLNALISMYSRCGGVETARRLIEQR 340
Query: 510 GMK--KVPGYSVV 520
G K K+ G++ +
Sbjct: 341 GTKDLKIEGFTAL 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,113,882
Number of Sequences: 539616
Number of extensions: 8658516
Number of successful extensions: 30106
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 21998
Number of HSP's gapped (non-prelim): 2307
length of query: 589
length of database: 191,569,459
effective HSP length: 123
effective length of query: 466
effective length of database: 125,196,691
effective search space: 58341658006
effective search space used: 58341658006
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)