Query 048181
Match_columns 310
No_of_seqs 228 out of 1335
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 12:11:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 1.4E-37 4.7E-42 283.2 24.5 289 18-310 3-296 (322)
2 3sre_A PON1, serum paraoxonase 100.0 9.6E-30 3.3E-34 234.5 25.8 260 29-310 45-341 (355)
3 3g4e_A Regucalcin; six bladed 100.0 5.4E-28 1.9E-32 217.4 27.2 230 29-304 8-247 (297)
4 3dr2_A Exported gluconolactona 100.0 7.5E-28 2.6E-32 217.2 25.4 234 23-294 36-278 (305)
5 3e5z_A Putative gluconolactona 100.0 1.1E-25 3.6E-30 201.4 29.2 234 20-294 16-257 (296)
6 2p4o_A Hypothetical protein; p 100.0 3.7E-26 1.3E-30 206.5 25.4 224 21-304 22-261 (306)
7 3v64_C Agrin; beta propeller, 99.9 3.4E-24 1.2E-28 197.8 28.8 208 32-292 71-285 (349)
8 3v65_B Low-density lipoprotein 99.9 2.3E-24 7.8E-29 201.6 27.7 208 32-292 114-328 (386)
9 3sov_A LRP-6, low-density lipo 99.9 3.4E-24 1.2E-28 195.4 27.7 220 22-293 13-249 (318)
10 1ijq_A LDL receptor, low-densi 99.9 8.8E-24 3E-28 192.3 29.7 208 32-291 28-247 (316)
11 1npe_A Nidogen, entactin; glyc 99.9 2.3E-23 8E-28 184.0 28.2 208 34-292 36-248 (267)
12 2ghs_A AGR_C_1268P; regucalcin 99.9 3.3E-23 1.1E-27 188.9 29.3 234 19-304 35-277 (326)
13 3p5b_L Low density lipoprotein 99.9 5.3E-23 1.8E-27 193.2 30.3 226 15-292 84-330 (400)
14 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 4E-23 1.4E-27 185.0 25.5 231 30-293 14-267 (314)
15 4a0p_A LRP6, LRP-6, low-densit 99.9 4.4E-22 1.5E-26 196.9 29.1 205 32-290 35-245 (628)
16 4hw6_A Hypothetical protein, I 99.9 2.7E-22 9.4E-27 190.2 25.7 205 32-291 137-382 (433)
17 2qe8_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 176.8 28.5 230 34-305 17-298 (343)
18 2dg1_A DRP35, lactonase; beta 99.9 2.8E-21 9.5E-26 174.9 27.4 220 29-293 40-273 (333)
19 3s94_A LRP-6, low-density lipo 99.9 1.3E-21 4.3E-26 193.4 26.3 205 32-289 38-250 (619)
20 1q7f_A NHL, brain tumor CG1071 99.9 1.1E-20 3.8E-25 167.5 28.9 216 30-293 26-248 (286)
21 3tc9_A Hypothetical hydrolase; 99.9 4.4E-21 1.5E-25 181.8 25.3 206 30-291 133-379 (430)
22 3m0c_C LDL receptor, low-densi 99.9 1.7E-20 5.9E-25 189.4 29.2 206 32-290 422-640 (791)
23 1n7d_A LDL receptor, low-densi 99.9 3.4E-22 1.1E-26 200.2 16.5 214 32-292 404-624 (699)
24 3s94_A LRP-6, low-density lipo 99.9 3E-20 1E-24 183.5 29.8 200 32-284 347-553 (619)
25 3hrp_A Uncharacterized protein 99.9 2.3E-20 8E-25 175.6 27.7 208 32-291 129-363 (409)
26 1rwi_B Serine/threonine-protei 99.9 1.7E-20 5.9E-25 164.3 24.5 199 35-288 25-227 (270)
27 2qc5_A Streptogramin B lactona 99.9 2E-19 6.7E-24 159.2 31.2 231 18-305 4-237 (300)
28 3fvz_A Peptidyl-glycine alpha- 99.9 5E-20 1.7E-24 167.6 24.0 163 31-229 21-226 (329)
29 2qc5_A Streptogramin B lactona 99.9 9.9E-19 3.4E-23 154.7 30.4 213 23-293 51-269 (300)
30 2z2n_A Virginiamycin B lyase; 99.9 1.6E-18 5.5E-23 153.3 30.0 225 24-308 47-277 (299)
31 2z2n_A Virginiamycin B lyase; 99.8 2.7E-18 9.3E-23 151.8 30.8 223 23-305 4-232 (299)
32 3kya_A Putative phosphatase; s 99.8 4.5E-19 1.5E-23 169.5 25.2 211 30-291 135-418 (496)
33 4a0p_A LRP6, LRP-6, low-densit 99.8 5.4E-19 1.8E-23 174.8 26.4 215 32-291 338-558 (628)
34 3dsm_A Uncharacterized protein 99.8 2E-18 6.8E-23 157.3 28.2 218 33-292 83-311 (328)
35 3v64_C Agrin; beta propeller, 99.8 2.4E-18 8.2E-23 158.6 26.5 198 38-289 38-240 (349)
36 1rwi_B Serine/threonine-protei 99.8 9.7E-19 3.3E-23 153.1 22.8 195 32-282 65-263 (270)
37 3hrp_A Uncharacterized protein 99.8 1.5E-18 5.2E-23 163.2 24.3 199 34-281 172-408 (409)
38 3v65_B Low-density lipoprotein 99.8 2.6E-18 8.9E-23 160.4 25.7 197 38-289 81-283 (386)
39 2p9w_A MAL S 1 allergenic prot 99.8 1.7E-18 5.7E-23 156.6 21.2 218 25-283 4-265 (334)
40 1q7f_A NHL, brain tumor CG1071 99.8 5.6E-18 1.9E-22 150.0 24.1 189 31-264 74-270 (286)
41 1npe_A Nidogen, entactin; glyc 99.8 1.4E-17 4.7E-22 146.8 24.2 180 31-257 76-263 (267)
42 3sov_A LRP-6, low-density lipo 99.8 8.1E-18 2.8E-22 153.2 22.5 177 32-252 77-259 (318)
43 3a9g_A Putative uncharacterize 99.8 2.3E-17 7.8E-22 152.3 25.7 225 30-286 25-301 (354)
44 1ijq_A LDL receptor, low-densi 99.8 3.2E-17 1.1E-21 148.8 26.1 189 47-290 4-202 (316)
45 2ism_A Putative oxidoreductase 99.8 2.2E-17 7.5E-22 152.3 24.3 217 23-266 22-288 (352)
46 4hw6_A Hypothetical protein, I 99.8 5.2E-18 1.8E-22 160.7 19.9 197 32-282 180-432 (433)
47 3p5b_L Low density lipoprotein 99.8 3.5E-17 1.2E-21 153.5 25.2 207 46-308 85-301 (400)
48 3tc9_A Hypothetical hydrolase; 99.8 9.8E-18 3.3E-22 158.7 20.4 197 32-282 177-429 (430)
49 3fvz_A Peptidyl-glycine alpha- 99.8 4.1E-17 1.4E-21 148.3 22.8 190 30-231 87-323 (329)
50 3m0c_C LDL receptor, low-densi 99.8 1.2E-16 4.1E-21 161.4 24.5 212 42-309 393-614 (791)
51 2fp8_A Strictosidine synthase; 99.8 4.8E-17 1.6E-21 147.3 18.7 198 34-284 80-314 (322)
52 2qe8_A Uncharacterized protein 99.7 4.3E-16 1.5E-20 142.5 23.4 195 32-265 65-311 (343)
53 3kya_A Putative phosphatase; s 99.7 2.8E-16 9.5E-21 150.2 20.4 203 32-285 184-477 (496)
54 3vgz_A Uncharacterized protein 99.7 7.3E-15 2.5E-19 132.7 26.9 225 16-292 26-272 (353)
55 3e5z_A Putative gluconolactona 99.7 5.9E-15 2E-19 131.3 25.0 203 24-286 61-289 (296)
56 2p4o_A Hypothetical protein; p 99.7 5.6E-15 1.9E-19 133.0 24.4 185 35-265 73-279 (306)
57 3das_A Putative oxidoreductase 99.7 1.5E-14 5.3E-19 132.5 24.3 177 29-226 27-231 (347)
58 1n7d_A LDL receptor, low-densi 99.6 1.7E-15 5.8E-20 151.6 16.1 193 44-290 377-578 (699)
59 2g8s_A Glucose/sorbosone dehyd 99.6 1.8E-14 6.3E-19 132.7 21.8 113 32-159 16-148 (353)
60 3dr2_A Exported gluconolactona 99.6 2.5E-14 8.6E-19 128.4 22.1 196 25-264 79-297 (305)
61 3vgz_A Uncharacterized protein 99.6 2.1E-13 7.2E-18 123.0 28.4 190 35-265 142-335 (353)
62 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3.5E-14 1.2E-18 126.5 21.7 194 34-282 71-298 (314)
63 3dsm_A Uncharacterized protein 99.6 3.1E-13 1.1E-17 122.7 25.5 183 34-263 44-244 (328)
64 3hfq_A Uncharacterized protein 99.6 6E-13 2E-17 120.6 27.2 227 33-295 85-335 (347)
65 3hfq_A Uncharacterized protein 99.6 1.5E-13 5.2E-18 124.6 23.2 195 32-265 38-261 (347)
66 3g4e_A Regucalcin; six bladed 99.6 1.7E-13 6E-18 122.5 22.0 191 25-265 48-263 (297)
67 3a9g_A Putative uncharacterize 99.6 1.5E-13 5.2E-18 126.7 21.8 203 32-264 71-331 (354)
68 2ism_A Putative oxidoreductase 99.6 8.4E-14 2.9E-18 128.2 19.2 202 32-265 73-335 (352)
69 3no2_A Uncharacterized protein 99.6 2.5E-12 8.6E-17 114.3 27.9 226 34-306 37-274 (276)
70 2dg1_A DRP35, lactonase; beta 99.6 2.6E-13 9E-18 122.2 21.4 199 34-282 87-315 (333)
71 2iwa_A Glutamine cyclotransfer 99.5 9.4E-12 3.2E-16 109.9 27.9 199 19-265 7-227 (266)
72 3qqz_A Putative uncharacterize 99.5 8.9E-12 3.1E-16 109.4 25.3 209 27-282 20-252 (255)
73 2iwa_A Glutamine cyclotransfer 99.5 2.9E-12 9.8E-17 113.2 21.7 166 24-230 57-237 (266)
74 3nol_A Glutamine cyclotransfer 99.5 6.5E-12 2.2E-16 110.1 21.6 163 23-229 77-255 (262)
75 1pby_B Quinohemoprotein amine 99.5 4.7E-11 1.6E-15 106.5 27.6 234 24-294 24-322 (337)
76 3mbr_X Glutamine cyclotransfer 99.5 1.2E-11 4.2E-16 107.4 22.5 164 22-229 54-234 (243)
77 3nok_A Glutaminyl cyclase; bet 99.5 1.3E-11 4.5E-16 108.2 21.7 162 23-229 87-265 (268)
78 3u4y_A Uncharacterized protein 99.5 4.8E-11 1.6E-15 106.8 26.1 186 34-264 41-241 (331)
79 1ri6_A Putative isomerase YBHE 99.4 1E-10 3.6E-15 104.5 26.3 216 35-294 85-322 (343)
80 1l0q_A Surface layer protein; 99.4 3.4E-10 1.2E-14 103.6 29.8 204 35-292 75-285 (391)
81 1cru_A Protein (soluble quinop 99.4 4.1E-12 1.4E-16 120.9 16.9 179 30-221 23-249 (454)
82 3scy_A Hypothetical bacterial 99.4 2.3E-10 8E-15 104.1 27.0 193 32-264 48-279 (361)
83 3u4y_A Uncharacterized protein 99.4 9.2E-11 3.2E-15 105.0 23.1 204 34-290 83-311 (331)
84 2ghs_A AGR_C_1268P; regucalcin 99.4 6.2E-11 2.1E-15 107.4 22.1 183 35-265 91-293 (326)
85 1jmx_B Amine dehydrogenase; ox 99.4 1.4E-10 4.8E-15 104.0 24.2 238 24-294 34-337 (349)
86 1l0q_A Surface layer protein; 99.4 8.7E-10 3E-14 100.9 29.5 184 34-263 32-219 (391)
87 1ri6_A Putative isomerase YBHE 99.4 4.8E-10 1.7E-14 100.1 26.9 191 34-264 38-251 (343)
88 2p9w_A MAL S 1 allergenic prot 99.4 2.6E-11 9E-16 109.6 17.0 174 92-282 11-214 (334)
89 3no2_A Uncharacterized protein 99.3 1.4E-09 4.8E-14 96.4 26.9 192 44-291 4-204 (276)
90 3c75_H MADH, methylamine dehyd 99.3 1.3E-10 4.4E-15 109.4 21.0 235 24-289 112-409 (426)
91 1jof_A Carboxy-CIS,CIS-muconat 99.3 5.8E-10 2E-14 102.2 23.4 213 33-287 39-297 (365)
92 3das_A Putative oxidoreductase 99.3 1.6E-10 5.6E-15 105.8 19.4 156 91-266 29-223 (347)
93 3scy_A Hypothetical bacterial 99.3 1.8E-09 6E-14 98.2 26.0 216 34-288 100-345 (361)
94 3bws_A Protein LP49; two-domai 99.3 2E-09 7E-14 99.8 26.1 219 35-291 171-399 (433)
95 1cru_A Protein (soluble quinop 99.3 1.5E-10 5.1E-15 110.1 18.0 166 91-266 24-249 (454)
96 1nir_A Nitrite reductase; hemo 99.3 3E-09 1E-13 103.3 27.2 187 36-263 181-389 (543)
97 2g8s_A Glucose/sorbosone dehyd 99.3 1.2E-10 4E-15 107.2 16.2 159 93-265 17-218 (353)
98 3nol_A Glutamine cyclotransfer 99.3 3E-09 1E-13 93.1 24.0 191 20-264 30-245 (262)
99 3nok_A Glutaminyl cyclase; bet 99.2 4.9E-09 1.7E-13 91.9 24.4 192 14-263 37-254 (268)
100 3bws_A Protein LP49; two-domai 99.2 1.2E-08 4.1E-13 94.6 27.4 184 34-263 212-420 (433)
101 1nir_A Nitrite reductase; hemo 99.2 3.5E-09 1.2E-13 102.8 24.3 201 40-291 144-364 (543)
102 3qqz_A Putative uncharacterize 99.2 3.9E-09 1.3E-13 92.6 21.6 176 22-229 59-252 (255)
103 1jof_A Carboxy-CIS,CIS-muconat 99.2 4E-09 1.4E-13 96.5 22.5 152 93-265 144-331 (365)
104 2mad_H Methylamine dehydrogena 99.2 5E-08 1.7E-12 90.2 29.5 226 34-289 67-357 (373)
105 3mbr_X Glutamine cyclotransfer 99.2 4.2E-09 1.4E-13 91.4 20.6 161 94-292 21-189 (243)
106 3hxj_A Pyrrolo-quinoline quino 99.2 2.2E-08 7.4E-13 89.3 25.7 192 39-294 103-295 (330)
107 3sjl_D Methylamine dehydrogena 99.1 9.9E-09 3.4E-13 95.2 22.5 238 24-294 72-375 (386)
108 3v9f_A Two-component system se 99.1 2E-08 6.9E-13 101.2 25.6 205 35-295 408-623 (781)
109 3sre_A PON1, serum paraoxonase 99.1 1.1E-09 3.6E-14 100.7 14.7 154 34-228 112-296 (355)
110 4a2l_A BT_4663, two-component 99.1 4.1E-08 1.4E-12 99.2 27.4 222 36-306 359-594 (795)
111 3v9f_A Two-component system se 99.1 2.6E-08 8.8E-13 100.5 25.8 222 36-306 315-547 (781)
112 1pby_B Quinohemoprotein amine 99.1 2.3E-08 7.8E-13 88.8 22.4 159 46-230 2-163 (337)
113 1qks_A Cytochrome CD1 nitrite 99.1 8.8E-08 3E-12 93.4 28.1 199 24-265 190-410 (567)
114 1mda_H Methylamine dehydrogena 99.1 1.6E-08 5.5E-13 93.4 21.7 214 45-293 32-357 (368)
115 4a2l_A BT_4663, two-component 99.1 4.5E-08 1.5E-12 98.9 26.5 205 35-295 407-626 (795)
116 1jmx_B Amine dehydrogenase; ox 99.1 9.1E-09 3.1E-13 92.0 19.1 160 98-292 4-185 (349)
117 3c75_H MADH, methylamine dehyd 99.0 4E-08 1.4E-12 92.4 21.4 199 43-264 82-339 (426)
118 2oiz_A Aromatic amine dehydrog 99.0 2.8E-07 9.5E-12 84.5 26.4 223 34-289 51-343 (361)
119 3q6k_A 43.2 kDa salivary prote 99.0 2.7E-07 9.2E-12 85.2 25.4 190 92-304 85-330 (381)
120 1fwx_A Nitrous oxide reductase 99.0 6.9E-08 2.4E-12 93.6 21.7 198 44-266 100-352 (595)
121 4a9v_A PHOX; hydrolase, beta-p 99.0 5.5E-09 1.9E-13 100.4 13.6 124 91-221 381-553 (592)
122 1qks_A Cytochrome CD1 nitrite 99.0 1.1E-07 3.7E-12 92.8 22.6 203 36-291 156-382 (567)
123 3hxj_A Pyrrolo-quinoline quino 98.9 8.7E-08 3E-12 85.3 19.7 150 99-294 103-255 (330)
124 2hqs_A Protein TOLB; TOLB, PAL 98.9 1.4E-06 4.6E-11 81.3 27.7 206 35-294 180-398 (415)
125 2oiz_A Aromatic amine dehydrog 98.9 2.7E-07 9.3E-12 84.6 22.3 98 144-257 258-360 (361)
126 2mad_H Methylamine dehydrogena 98.9 5.1E-07 1.7E-11 83.4 24.2 207 34-252 125-371 (373)
127 3sjl_D Methylamine dehydrogena 98.9 4.3E-07 1.5E-11 84.2 23.6 218 23-252 121-383 (386)
128 1mda_H Methylamine dehydrogena 98.9 4.2E-08 1.4E-12 90.6 16.7 70 180-252 295-366 (368)
129 3q6k_A 43.2 kDa salivary prote 98.9 9.9E-07 3.4E-11 81.4 25.5 199 32-264 85-343 (381)
130 1gxr_A ESG1, transducin-like e 98.9 4.7E-06 1.6E-10 73.6 29.4 187 34-265 98-286 (337)
131 2ece_A 462AA long hypothetical 98.9 1.4E-07 4.7E-12 88.7 19.9 194 33-262 137-399 (462)
132 2wg3_C Hedgehog-interacting pr 98.9 1.3E-07 4.5E-12 89.9 19.2 221 32-265 12-303 (463)
133 2ymu_A WD-40 repeat protein; u 98.9 8.5E-06 2.9E-10 78.1 31.7 214 30-304 341-556 (577)
134 3amr_A 3-phytase; beta-propell 98.8 2.1E-06 7.1E-11 78.2 25.3 205 42-294 37-276 (355)
135 2ymu_A WD-40 repeat protein; u 98.8 2.2E-05 7.6E-10 75.1 31.4 202 34-292 304-507 (577)
136 2ece_A 462AA long hypothetical 98.8 4.1E-06 1.4E-10 78.7 25.2 201 43-266 93-343 (462)
137 2ojh_A Uncharacterized protein 98.8 3.3E-06 1.1E-10 72.8 22.7 180 35-259 43-231 (297)
138 3ow8_A WD repeat-containing pr 98.7 5.1E-05 1.7E-09 67.9 30.2 192 28-265 75-269 (321)
139 1gxr_A ESG1, transducin-like e 98.7 1.8E-05 6.2E-10 69.7 26.8 183 34-264 142-326 (337)
140 2z3z_A Dipeptidyl aminopeptida 98.7 1.7E-05 6E-10 78.2 28.4 146 95-262 259-418 (706)
141 3o4h_A Acylamino-acid-releasin 98.7 6.5E-07 2.2E-11 86.7 17.4 183 35-265 66-266 (582)
142 1fwx_A Nitrous oxide reductase 98.7 3.2E-06 1.1E-10 82.0 21.8 221 26-293 127-442 (595)
143 2ojh_A Uncharacterized protein 98.7 6.4E-06 2.2E-10 70.9 21.7 182 35-260 86-287 (297)
144 4ery_A WD repeat-containing pr 98.6 0.0001 3.4E-09 64.9 29.0 211 27-291 17-232 (312)
145 3s25_A Hypothetical 7-bladed b 98.6 2.5E-06 8.5E-11 76.5 18.0 196 21-284 87-294 (302)
146 3ott_A Two-component system se 98.6 3.5E-06 1.2E-10 84.6 20.3 221 36-309 326-570 (758)
147 1k8k_C P40, ARP2/3 complex 41 98.6 0.00011 3.8E-09 65.7 28.1 209 35-292 10-243 (372)
148 3zwl_B Eukaryotic translation 98.6 6E-05 2.1E-09 67.1 26.0 200 24-264 23-238 (369)
149 1r5m_A SIR4-interacting protei 98.5 0.00016 5.6E-09 65.5 28.9 205 35-291 110-328 (425)
150 4g56_B MGC81050 protein; prote 98.5 6E-06 2E-10 75.2 18.2 162 36-230 45-213 (357)
151 3ott_A Two-component system se 98.5 2E-05 6.8E-10 79.0 23.3 205 36-293 375-596 (758)
152 3s25_A Hypothetical 7-bladed b 98.5 4.7E-06 1.6E-10 74.7 16.8 138 43-231 24-177 (302)
153 2ecf_A Dipeptidyl peptidase IV 98.5 5.7E-06 2E-10 82.1 18.8 153 35-218 38-228 (741)
154 3ow8_A WD repeat-containing pr 98.5 0.00019 6.4E-09 64.1 27.1 183 35-264 124-310 (321)
155 1erj_A Transcriptional repress 98.5 0.0003 1E-08 64.4 28.7 206 36-293 126-352 (393)
156 3zwl_B Eukaryotic translation 98.5 0.00015 5.1E-09 64.5 25.8 186 34-263 75-278 (369)
157 2hqs_A Protein TOLB; TOLB, PAL 98.5 2.4E-05 8.2E-10 72.8 21.2 153 35-230 224-387 (415)
158 1got_B GT-beta; complex (GTP-b 98.5 0.00049 1.7E-08 61.7 29.3 204 35-291 99-310 (340)
159 4e54_B DNA damage-binding prot 98.5 3.3E-05 1.1E-09 71.9 22.2 189 36-264 122-316 (435)
160 3pe7_A Oligogalacturonate lyas 98.5 2.3E-05 7.7E-10 71.1 20.3 158 38-230 85-273 (388)
161 2ecf_A Dipeptidyl peptidase IV 98.4 2.9E-05 1E-09 77.0 22.7 198 36-261 111-353 (741)
162 3amr_A 3-phytase; beta-propell 98.4 1.6E-05 5.3E-10 72.4 18.3 143 107-282 41-209 (355)
163 2aq5_A Coronin-1A; WD40 repeat 98.4 0.00036 1.2E-08 63.8 27.8 193 34-260 82-283 (402)
164 2pm9_A Protein WEB1, protein t 98.4 7E-05 2.4E-09 68.2 22.8 193 35-263 69-282 (416)
165 3pe7_A Oligogalacturonate lyas 98.4 6.8E-05 2.3E-09 67.9 22.5 216 39-285 41-276 (388)
166 2aq5_A Coronin-1A; WD40 repeat 98.4 0.00013 4.6E-09 66.7 24.5 192 34-261 132-330 (402)
167 2wg3_C Hedgehog-interacting pr 98.4 6.8E-05 2.3E-09 71.2 22.7 150 95-264 140-355 (463)
168 4gqb_B Methylosome protein 50; 98.4 7.1E-05 2.4E-09 67.9 21.8 185 35-262 129-318 (344)
169 4g56_B MGC81050 protein; prote 98.4 4.8E-05 1.6E-09 69.1 20.6 189 35-264 141-332 (357)
170 4aez_A CDC20, WD repeat-contai 98.4 0.00073 2.5E-08 61.8 28.1 181 35-263 136-322 (401)
171 1k8k_C P40, ARP2/3 complex 41 98.3 0.00017 5.7E-09 64.5 23.1 190 34-264 53-264 (372)
172 4aez_A CDC20, WD repeat-contai 98.3 0.00076 2.6E-08 61.7 28.0 204 34-287 177-385 (401)
173 3ei3_B DNA damage-binding prot 98.3 0.00034 1.1E-08 63.3 25.3 162 33-230 73-236 (383)
174 1got_B GT-beta; complex (GTP-b 98.3 0.0011 3.9E-08 59.2 28.5 192 28-265 50-247 (340)
175 1r5m_A SIR4-interacting protei 98.3 0.00027 9.3E-09 64.0 23.6 200 33-265 149-351 (425)
176 3azo_A Aminopeptidase; POP fam 98.3 0.0001 3.6E-09 72.0 21.8 156 35-230 131-325 (662)
177 3azo_A Aminopeptidase; POP fam 98.3 0.0001 3.5E-09 72.2 21.6 213 38-292 81-334 (662)
178 2xyi_A Probable histone-bindin 98.3 0.00029 9.9E-09 65.4 23.3 202 34-264 129-342 (430)
179 2ynn_A Coatomer subunit beta'; 98.2 0.0022 7.5E-08 56.4 28.5 156 34-230 14-172 (304)
180 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.00064 2.2E-08 63.3 25.1 209 35-284 151-394 (450)
181 4h5i_A Guanine nucleotide-exch 98.2 0.00051 1.7E-08 62.5 23.8 188 35-264 135-332 (365)
182 2z3z_A Dipeptidyl aminopeptida 98.2 0.00026 9E-09 69.7 23.3 173 35-230 122-344 (706)
183 1vyh_C Platelet-activating fac 98.2 0.0018 6E-08 59.7 27.6 204 34-292 151-379 (410)
184 4ery_A WD repeat-containing pr 98.2 0.0024 8.2E-08 55.9 29.4 155 34-230 66-223 (312)
185 3vl1_A 26S proteasome regulato 98.2 0.0014 4.9E-08 59.6 26.3 162 30-230 136-322 (420)
186 4a9v_A PHOX; hydrolase, beta-p 98.2 2.5E-05 8.4E-10 75.2 14.6 124 32-159 382-550 (592)
187 1vyh_C Platelet-activating fac 98.2 0.0015 5.1E-08 60.2 26.3 153 34-230 109-265 (410)
188 3fm0_A Protein CIAO1; WDR39,SG 98.2 0.00068 2.3E-08 60.9 23.2 190 35-263 18-213 (345)
189 3vl1_A 26S proteasome regulato 98.2 0.0007 2.4E-08 61.7 23.5 179 39-263 103-310 (420)
190 4gqb_B Methylosome protein 50; 98.2 0.00081 2.8E-08 60.8 23.6 180 36-257 85-270 (344)
191 1sq9_A Antiviral protein SKI8; 98.2 0.0014 4.6E-08 59.2 25.1 208 34-290 63-330 (397)
192 2pbi_B Guanine nucleotide-bind 98.2 0.0028 9.7E-08 57.1 27.1 208 35-290 108-323 (354)
193 3dm0_A Maltose-binding peripla 98.2 0.0023 7.9E-08 63.1 28.6 204 34-290 431-640 (694)
194 3mkq_A Coatomer beta'-subunit; 98.2 0.0024 8.3E-08 63.5 28.9 155 34-230 14-172 (814)
195 3ei3_B DNA damage-binding prot 98.1 0.001 3.5E-08 60.0 23.8 155 34-230 119-282 (383)
196 3mkq_A Coatomer beta'-subunit; 98.1 0.0016 5.6E-08 64.8 26.9 186 34-264 56-248 (814)
197 3dwl_C Actin-related protein 2 98.1 0.00012 4E-09 66.0 17.0 197 30-265 52-272 (377)
198 3jrp_A Fusion protein of prote 98.1 0.0039 1.3E-07 55.4 26.9 191 34-264 12-229 (379)
199 2xyi_A Probable histone-bindin 98.1 0.00037 1.3E-08 64.6 20.7 205 34-284 182-411 (430)
200 1pgu_A Actin interacting prote 98.1 0.0011 3.9E-08 63.3 24.7 206 34-289 19-245 (615)
201 1yfq_A Cell cycle arrest prote 98.1 0.0005 1.7E-08 60.7 20.6 212 34-304 57-301 (342)
202 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0011 3.8E-08 60.0 22.9 97 178-293 248-348 (376)
203 3dwl_C Actin-related protein 2 98.0 0.00015 5.3E-09 65.3 15.9 156 35-229 13-176 (377)
204 4h5i_A Guanine nucleotide-exch 98.0 0.00046 1.6E-08 62.8 18.8 158 35-230 178-343 (365)
205 3sfz_A APAF-1, apoptotic pepti 98.0 0.0051 1.7E-07 64.5 28.7 195 27-264 609-818 (1249)
206 2pbi_B Guanine nucleotide-bind 98.0 0.0064 2.2E-07 54.7 25.9 183 35-264 156-346 (354)
207 2xdw_A Prolyl endopeptidase; a 98.0 0.0014 4.7E-08 65.0 23.1 214 37-294 128-380 (710)
208 2vdu_B TRNA (guanine-N(7)-)-me 98.0 0.0021 7.3E-08 59.7 23.1 156 35-230 104-271 (450)
209 3c5m_A Oligogalacturonate lyas 98.0 0.00029 9.9E-09 63.6 16.4 192 36-261 38-255 (396)
210 1k32_A Tricorn protease; prote 98.0 0.00041 1.4E-08 72.0 19.6 178 35-262 297-490 (1045)
211 3odt_A Protein DOA1; ubiquitin 98.0 0.0071 2.4E-07 52.2 26.7 202 34-293 60-266 (313)
212 4a11_B DNA excision repair pro 98.0 0.0094 3.2E-07 53.4 26.6 168 34-230 44-218 (408)
213 1xfd_A DIP, dipeptidyl aminope 97.9 0.00053 1.8E-08 67.6 19.0 143 35-217 18-191 (723)
214 2pm9_A Protein WEB1, protein t 97.9 0.0015 5.3E-08 59.2 20.7 198 33-264 113-326 (416)
215 3k26_A Polycomb protein EED; W 97.9 0.0097 3.3E-07 52.5 25.5 157 34-230 70-260 (366)
216 1xfd_A DIP, dipeptidyl aminope 97.9 0.003 1E-07 62.2 23.8 152 96-264 257-429 (723)
217 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00099 3.4E-08 60.4 19.0 126 105-265 239-369 (376)
218 3sfz_A APAF-1, apoptotic pepti 97.9 0.007 2.4E-07 63.4 27.9 190 30-265 654-861 (1249)
219 3i2n_A WD repeat-containing pr 97.9 0.0035 1.2E-07 55.3 21.6 187 35-262 67-278 (357)
220 1sq9_A Antiviral protein SKI8; 97.9 0.002 6.7E-08 58.1 20.3 165 34-230 187-395 (397)
221 3o4h_A Acylamino-acid-releasin 97.8 0.00062 2.1E-08 65.6 17.4 189 35-283 111-315 (582)
222 3c5m_A Oligogalacturonate lyas 97.8 0.01 3.5E-07 53.2 24.0 159 97-284 191-385 (396)
223 2oaj_A Protein SNI1; WD40 repe 97.8 0.0094 3.2E-07 61.0 26.2 198 35-288 19-248 (902)
224 4e54_B DNA damage-binding prot 97.8 0.0093 3.2E-07 55.1 23.8 157 34-230 165-327 (435)
225 2xzm_R RACK1; ribosome, transl 97.8 0.018 6.2E-07 51.2 28.0 186 34-262 77-273 (343)
226 3zwu_A Alkaline phosphatase PH 97.8 0.00032 1.1E-08 68.3 14.0 122 91-218 381-550 (592)
227 1k32_A Tricorn protease; prote 97.8 0.006 2.1E-07 63.2 24.6 150 35-218 339-491 (1045)
228 1pgu_A Actin interacting prote 97.8 0.005 1.7E-07 58.8 22.4 142 94-263 447-602 (615)
229 2ad6_A Methanol dehydrogenase 97.8 0.013 4.5E-07 56.8 25.4 80 202-295 389-507 (571)
230 3jrp_A Fusion protein of prote 97.8 0.013 4.4E-07 51.9 23.8 193 30-264 52-276 (379)
231 3frx_A Guanine nucleotide-bind 97.8 0.019 6.5E-07 50.6 27.8 186 31-263 63-256 (319)
232 1nr0_A Actin interacting prote 97.8 0.0045 1.5E-07 60.1 22.0 187 34-264 19-210 (611)
233 1erj_A Transcriptional repress 97.7 0.025 8.5E-07 51.4 29.0 198 35-263 66-275 (393)
234 3dw8_B Serine/threonine-protei 97.7 0.011 3.9E-07 53.9 23.3 167 32-230 176-373 (447)
235 3iz6_a 40S ribosomal protein R 97.7 0.0071 2.4E-07 54.9 21.7 155 36-230 208-375 (380)
236 3f3f_A Nucleoporin SEH1; struc 97.7 0.019 6.6E-07 49.7 25.1 75 34-125 12-91 (351)
237 3odt_A Protein DOA1; ubiquitin 97.7 0.019 6.5E-07 49.4 25.5 205 30-291 15-223 (313)
238 3dw8_B Serine/threonine-protei 97.7 0.022 7.5E-07 52.0 24.9 216 35-286 95-377 (447)
239 3fm0_A Protein CIAO1; WDR39,SG 97.7 0.0051 1.8E-07 55.0 19.5 158 33-228 61-223 (345)
240 3iz6_a 40S ribosomal protein R 97.7 0.031 1.1E-06 50.6 28.4 84 177-265 226-319 (380)
241 3frx_A Guanine nucleotide-bind 97.7 0.027 9.3E-07 49.6 27.8 191 29-264 13-216 (319)
242 1kb0_A Quinohemoprotein alcoho 97.7 0.009 3.1E-07 59.2 22.6 82 178-265 456-540 (677)
243 4aow_A Guanine nucleotide-bind 97.6 0.026 8.8E-07 49.3 28.4 187 34-264 87-276 (340)
244 2ynn_A Coatomer subunit beta'; 97.6 0.026 9E-07 49.3 27.0 204 35-292 57-269 (304)
245 1yfq_A Cell cycle arrest prote 97.6 0.017 5.8E-07 50.6 22.3 154 34-230 12-179 (342)
246 3k26_A Polycomb protein EED; W 97.6 0.012 4.2E-07 51.8 21.5 193 34-265 116-356 (366)
247 3bg1_A Protein SEC13 homolog; 97.6 0.015 5.1E-07 51.3 21.7 230 34-292 58-304 (316)
248 3lrv_A PRE-mRNA-splicing facto 97.6 0.02 6.8E-07 50.9 22.5 143 95-264 127-280 (343)
249 3i2n_A WD repeat-containing pr 97.6 0.0012 4.1E-08 58.4 14.1 151 41-229 176-352 (357)
250 1nr0_A Actin interacting prote 97.6 0.043 1.5E-06 53.1 25.8 208 30-263 144-386 (611)
251 2ad6_A Methanol dehydrogenase 97.6 0.016 5.4E-07 56.2 22.5 83 177-265 442-527 (571)
252 3jro_A Fusion protein of prote 97.5 0.0099 3.4E-07 59.4 21.5 190 34-263 10-226 (753)
253 1kv9_A Type II quinohemoprotei 97.5 0.0074 2.5E-07 59.7 20.2 80 178-265 437-521 (668)
254 2xzm_R RACK1; ribosome, transl 97.5 0.041 1.4E-06 48.8 24.3 155 34-230 119-285 (343)
255 3mmy_A MRNA export factor; mRN 97.5 0.039 1.4E-06 48.4 23.6 80 31-129 37-122 (368)
256 2gop_A Trilobed protease; beta 97.5 0.025 8.5E-07 49.9 21.9 149 35-227 60-250 (347)
257 2xdw_A Prolyl endopeptidase; a 97.5 0.02 6.7E-07 56.6 23.0 154 96-281 235-412 (710)
258 1kb0_A Quinohemoprotein alcoho 97.5 0.022 7.5E-07 56.4 23.1 124 44-192 77-203 (677)
259 3dm0_A Maltose-binding peripla 97.5 0.05 1.7E-06 53.4 25.6 157 34-230 473-632 (694)
260 4a5s_A Dipeptidyl peptidase 4 97.5 0.032 1.1E-06 55.5 24.1 173 37-231 65-295 (740)
261 4a11_B DNA excision repair pro 97.5 0.053 1.8E-06 48.4 24.5 155 34-230 100-276 (408)
262 1yiq_A Quinohemoprotein alcoho 97.5 0.02 6.7E-07 56.8 22.2 80 178-265 454-538 (689)
263 2j04_A TAU60, YPL007P, hypothe 97.5 0.092 3.1E-06 50.8 25.9 168 34-231 16-212 (588)
264 3mmy_A MRNA export factor; mRN 97.4 0.018 6.3E-07 50.6 19.9 204 34-264 87-335 (368)
265 3lrv_A PRE-mRNA-splicing facto 97.4 0.05 1.7E-06 48.2 22.4 208 43-291 46-280 (343)
266 4gga_A P55CDC, cell division c 97.4 0.074 2.5E-06 48.6 28.9 190 25-263 139-339 (420)
267 1z68_A Fibroblast activation p 97.4 0.0024 8.2E-08 63.0 14.7 137 36-217 18-187 (719)
268 1z68_A Fibroblast activation p 97.4 0.0094 3.2E-07 58.7 18.8 169 36-227 62-284 (719)
269 1flg_A Protein (quinoprotein e 97.4 0.059 2E-06 52.3 24.1 83 177-265 464-549 (582)
270 2oaj_A Protein SNI1; WD40 repe 97.3 0.042 1.4E-06 56.2 23.0 155 35-229 60-241 (902)
271 1tl2_A L10, protein (tachylect 97.3 0.0038 1.3E-07 53.0 12.5 165 23-227 31-207 (236)
272 3zwu_A Alkaline phosphatase PH 97.3 0.0046 1.6E-07 60.2 14.8 122 32-157 382-548 (592)
273 1kv9_A Type II quinohemoprotei 97.3 0.033 1.1E-06 55.0 21.2 124 44-192 66-191 (668)
274 4aow_A Guanine nucleotide-bind 97.3 0.078 2.7E-06 46.1 23.3 142 96-264 174-326 (340)
275 1yr2_A Prolyl oligopeptidase; 97.2 0.022 7.6E-07 56.7 19.7 209 36-292 165-404 (741)
276 2pm7_B Protein transport prote 97.2 0.094 3.2E-06 45.5 22.3 161 34-230 10-189 (297)
277 3v7d_B Cell division control p 97.2 0.14 4.9E-06 47.0 26.0 197 38-292 127-351 (464)
278 2bkl_A Prolyl endopeptidase; m 97.2 0.021 7.3E-07 56.3 18.5 210 36-292 123-360 (695)
279 2gop_A Trilobed protease; beta 97.1 0.011 3.8E-07 52.3 14.9 115 116-261 44-186 (347)
280 1w6s_A Methanol dehydrogenase 97.1 0.075 2.6E-06 51.8 21.8 80 177-265 451-536 (599)
281 3vu4_A KMHSV2; beta-propeller 97.1 0.13 4.4E-06 46.0 23.3 85 175-265 155-261 (355)
282 3jro_A Fusion protein of prote 97.1 0.049 1.7E-06 54.3 21.0 195 30-264 50-274 (753)
283 4gga_A P55CDC, cell division c 97.1 0.15 5E-06 46.6 22.6 148 95-264 232-384 (420)
284 3f3f_A Nucleoporin SEH1; struc 97.1 0.087 3E-06 45.5 19.6 115 34-158 111-236 (351)
285 3gre_A Serine/threonine-protei 97.0 0.13 4.4E-06 46.9 21.4 211 33-292 63-302 (437)
286 3iuj_A Prolyl endopeptidase; h 97.0 0.13 4.5E-06 50.6 22.4 168 98-293 179-369 (693)
287 2j04_A TAU60, YPL007P, hypothe 97.0 0.028 9.6E-07 54.4 16.6 151 35-226 131-295 (588)
288 3v7d_B Cell division control p 96.9 0.24 8.2E-06 45.4 28.1 228 34-305 204-441 (464)
289 3iuj_A Prolyl endopeptidase; h 96.9 0.22 7.5E-06 49.1 23.3 152 97-281 237-403 (693)
290 1yiq_A Quinohemoprotein alcoho 96.9 0.14 4.6E-06 50.8 21.8 124 44-192 70-196 (689)
291 4ggc_A P55CDC, cell division c 96.9 0.17 5.7E-06 43.4 25.4 83 177-264 219-304 (318)
292 2hes_X YDR267CP; beta-propelle 96.9 0.22 7.4E-06 43.9 25.1 157 34-229 59-229 (330)
293 2pm7_B Protein transport prote 96.9 0.2 6.8E-06 43.4 22.0 190 35-265 55-275 (297)
294 1w6s_A Methanol dehydrogenase 96.8 0.42 1.4E-05 46.5 24.3 130 39-192 58-195 (599)
295 4a5s_A Dipeptidyl peptidase 4 96.8 0.015 5E-07 57.9 13.5 119 98-230 21-141 (740)
296 2bkl_A Prolyl endopeptidase; m 96.8 0.26 8.9E-06 48.4 22.4 183 37-264 171-383 (695)
297 2hz6_A Endoplasmic reticulum t 96.8 0.0024 8.2E-08 58.3 7.1 194 38-292 4-202 (369)
298 3bg1_A Protein SEC13 homolog; 96.7 0.15 5.2E-06 44.6 18.2 160 34-229 14-197 (316)
299 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.37 1.2E-05 44.1 21.8 111 96-230 322-442 (445)
300 2hes_X YDR267CP; beta-propelle 96.7 0.3 1E-05 42.9 22.6 156 35-229 16-183 (330)
301 1tl2_A L10, protein (tachylect 96.6 0.014 4.7E-07 49.6 10.0 135 95-262 42-199 (236)
302 2oit_A Nucleoporin 214KDA; NH2 96.6 0.11 3.8E-06 48.2 17.2 159 35-230 94-278 (434)
303 3b7f_A Glycosyl hydrolase, BNR 96.5 0.27 9.2E-06 44.7 19.3 199 34-262 55-297 (394)
304 1flg_A Protein (quinoprotein e 96.5 0.66 2.3E-05 44.9 24.3 72 44-128 68-140 (582)
305 3gre_A Serine/threonine-protei 96.4 0.41 1.4E-05 43.4 19.9 157 35-230 170-359 (437)
306 2j04_B YDR362CP, TAU91; beta p 96.2 0.18 6.2E-06 48.2 16.8 188 35-261 209-414 (524)
307 2oit_A Nucleoporin 214KDA; NH2 96.1 0.087 3E-06 48.9 13.8 82 199-293 150-233 (434)
308 2j04_B YDR362CP, TAU91; beta p 95.9 0.2 6.8E-06 47.9 15.3 151 35-229 268-427 (524)
309 3b7f_A Glycosyl hydrolase, BNR 95.8 0.83 2.8E-05 41.4 18.5 145 95-263 56-252 (394)
310 2xbg_A YCF48-like protein; pho 95.7 1 3.6E-05 39.7 21.1 188 36-283 124-322 (327)
311 4ggc_A P55CDC, cell division c 95.7 0.87 3E-05 38.8 20.5 161 33-229 150-314 (318)
312 3vu4_A KMHSV2; beta-propeller 95.3 1.5 5.1E-05 38.9 24.3 72 141-231 197-272 (355)
313 4gq1_A NUP37; propeller, trans 95.2 0.97 3.3E-05 40.8 16.7 52 176-229 336-388 (393)
314 1yr2_A Prolyl oligopeptidase; 95.2 2.7 9.3E-05 41.4 23.5 142 96-265 270-428 (741)
315 1p22_A F-BOX/WD-repeat protein 94.8 2.3 8E-05 38.5 25.4 192 40-292 138-335 (435)
316 2xe4_A Oligopeptidase B; hydro 94.4 1.9 6.7E-05 42.8 17.8 154 36-230 176-354 (751)
317 2ovr_B FBW7, F-BOX/WD repeat p 94.2 3.2 0.00011 37.6 29.2 206 35-304 161-369 (445)
318 4gq1_A NUP37; propeller, trans 93.4 4.3 0.00015 36.4 23.0 79 30-126 133-220 (393)
319 3sbq_A Nitrous-oxide reductase 92.8 0.4 1.4E-05 46.1 8.9 90 181-280 300-405 (638)
320 2be1_A Serine/threonine-protei 92.4 3.3 0.00011 37.1 14.2 25 46-70 11-35 (339)
321 1p22_A F-BOX/WD-repeat protein 92.3 6.3 0.00022 35.6 24.8 150 35-230 175-325 (435)
322 2xbg_A YCF48-like protein; pho 92.1 5.8 0.0002 34.7 25.5 199 17-263 20-223 (327)
323 2xe4_A Oligopeptidase B; hydro 90.7 6.9 0.00023 38.8 15.9 98 141-257 175-283 (751)
324 2w18_A PALB2, fancn, partner a 90.6 9.4 0.00032 34.4 20.2 51 177-228 303-355 (356)
325 2hz6_A Endoplasmic reticulum t 89.7 0.47 1.6E-05 42.8 5.9 59 151-229 9-67 (369)
326 1xip_A Nucleoporin NUP159; bet 85.3 20 0.00068 32.6 14.1 185 35-264 39-233 (388)
327 1k3i_A Galactose oxidase precu 84.5 30 0.001 33.4 17.7 128 35-194 187-329 (656)
328 1k3i_A Galactose oxidase precu 77.2 53 0.0018 31.6 20.9 124 38-190 247-380 (656)
329 3ii7_A Kelch-like protein 7; p 75.0 37 0.0013 28.7 19.6 110 98-229 144-271 (306)
330 2uvk_A YJHT; unknown function, 74.4 42 0.0015 29.1 21.2 189 44-263 19-260 (357)
331 2be1_A Serine/threonine-protei 71.0 22 0.00076 31.6 9.4 24 105-128 10-33 (339)
332 3a0f_A Xyloglucanase; beta-pro 69.7 90 0.0031 30.8 24.3 115 35-158 22-152 (763)
333 4asc_A Kelch repeat and BTB do 69.0 53 0.0018 27.9 15.0 97 98-216 143-249 (315)
334 2cn3_A Xyloglucanase, beta-1,4 68.4 93 0.0032 30.5 14.6 122 95-225 24-159 (737)
335 3s9j_A Member of DUF4221 famil 64.6 27 0.00092 31.5 8.6 77 208-294 37-121 (369)
336 2woz_A Kelch repeat and BTB do 63.9 67 0.0023 27.3 17.5 79 98-195 153-238 (318)
337 2cn3_A Xyloglucanase, beta-1,4 57.7 1.5E+02 0.005 29.1 25.9 124 22-158 11-151 (737)
338 1xip_A Nucleoporin NUP159; bet 57.5 1.1E+02 0.0037 27.6 16.8 134 25-215 83-230 (388)
339 3a0f_A Xyloglucanase; beta-pro 51.4 1.9E+02 0.0064 28.5 14.3 66 93-158 20-94 (763)
340 1sqj_A OXG-RCBH, oligoxylogluc 47.0 2.2E+02 0.0076 28.1 14.4 66 93-158 14-83 (789)
341 2vpj_A Kelch-like protein 12; 46.1 1.3E+02 0.0044 25.0 24.9 156 98-284 107-279 (301)
342 2vpj_A Kelch-like protein 12; 45.9 1.3E+02 0.0044 25.0 20.4 146 44-229 112-277 (301)
343 2w18_A PALB2, fancn, partner a 42.1 1.9E+02 0.0064 25.8 18.4 145 104-264 191-346 (356)
344 1zgk_A Kelch-like ECH-associat 41.1 1.6E+02 0.0054 24.7 20.3 110 98-229 163-286 (308)
345 2woz_A Kelch repeat and BTB do 39.4 1.7E+02 0.0059 24.6 19.9 165 98-289 104-293 (318)
346 2xn4_A Kelch-like protein 2; s 37.7 1.8E+02 0.006 24.2 21.2 110 98-229 150-275 (302)
347 3f6k_A Sortilin; protein sorti 36.9 2.9E+02 0.0099 27.0 11.4 44 116-159 66-110 (685)
348 3ii7_A Kelch-like protein 7; p 35.9 1.9E+02 0.0064 24.0 24.9 195 44-283 55-272 (306)
349 3hx6_A Type 4 fimbrial biogene 34.0 1.2E+02 0.0042 28.9 8.0 54 178-232 222-286 (570)
350 1sqj_A OXG-RCBH, oligoxylogluc 33.6 3.6E+02 0.012 26.5 23.6 164 34-230 15-200 (789)
351 2xn4_A Kelch-like protein 2; s 28.6 2.5E+02 0.0085 23.2 25.9 165 97-290 102-283 (302)
352 2zwa_A Leucine carboxyl methyl 27.8 4.2E+02 0.014 25.5 27.4 173 98-292 444-644 (695)
353 4asc_A Kelch repeat and BTB do 23.1 3.3E+02 0.011 22.7 22.4 165 98-289 93-283 (315)
354 2law_A Yorkie homolog; YAP, SM 22.9 85 0.0029 17.9 3.1 20 36-55 10-29 (38)
355 2djy_A SMAD ubiquitination reg 22.5 1.2E+02 0.0039 17.8 3.7 21 36-56 11-31 (42)
356 3hx6_A Type 4 fimbrial biogene 22.4 2.5E+02 0.0085 26.8 7.8 20 106-125 266-285 (570)
357 2ysf_A E3 ubiquitin-protein li 21.6 1.2E+02 0.0041 17.4 3.6 21 36-56 11-31 (40)
358 2l4j_A YES-associated protein 21.6 1.2E+02 0.0042 18.1 3.7 22 35-56 14-35 (46)
359 1wr3_A Ubiquitin-protein ligas 21.3 1.2E+02 0.004 16.8 3.6 19 37-55 9-27 (36)
360 1wr7_A NEDD4-2; all-beta, liga 21.1 1.2E+02 0.0043 17.4 3.6 21 36-56 12-32 (41)
361 1ymz_A CC45; artificial protei 21.0 1.3E+02 0.0045 17.5 3.7 20 37-56 13-32 (43)
362 2lc4_A PILP protein; type IV p 20.9 2.2E+02 0.0076 20.7 5.6 61 244-309 42-103 (111)
363 2ysg_A Syntaxin-binding protei 20.7 1.2E+02 0.0042 17.4 3.5 21 36-56 11-31 (40)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=1.4e-37 Score=283.24 Aligned_cols=289 Identities=37% Similarity=0.721 Sum_probs=213.9
Q ss_pred eeeecceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCce
Q 048181 18 VFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRT 96 (310)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P 96 (310)
+-+.|.++++++|+++..||++++|++|++||++..+++|++++++++ .+.+...........|+|.........+.+|
T Consensus 3 ~~~~~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p 82 (322)
T 2fp8_A 3 ALSSPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRT 82 (322)
T ss_dssp -------CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCE
T ss_pred cccCCccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCC
Confidence 345678889999999999999999999999999999999999998864 5555432221111123331100111234579
Q ss_pred eeEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeC-CCCeEEEEcCCCccCccceeEeeeec
Q 048181 97 FGLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQ-GTGVVYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 97 ~Gla~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~-~~G~lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
.||++++.+|+|||+|...+|+++|+++++.+.+.....+.++.+|||+++++ + |+|||+|+...+..+.+...+.+.
T Consensus 83 ~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHT
T ss_pred ceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehccc
Confidence 99999833899999998888999999887776666555566788999999999 6 999999986533322211112223
Q ss_pred CCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCC
Q 048181 176 DSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGL 254 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~ 254 (310)
.+.|+|+++|+++++++.+...+..||||++++||++|||+++.+++|++|++++...+..+. ..+++ |+||++|+
T Consensus 162 ~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-- 238 (322)
T 2fp8_A 162 DKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-- 238 (322)
T ss_dssp CCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT--
T ss_pred CCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC--
Confidence 456899999998888888888889999999999999999999999999999998755555555 45677 99999999
Q ss_pred CCcEEEEEecCCCCCC--CCceeeEEECCCCcEEEEEecCCCccccceeEEEecCCCC
Q 048181 255 LQTFWEAAIITRQPAG--TPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGGAL 310 (310)
Q Consensus 255 dG~l~va~~~~~~~~~--~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~~~~l 310 (310)
+|+|||+.+..+...| .....+.++|++|+++..+..|.+..+..++.++..+++|
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L 296 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLL 296 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEE
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEE
Confidence 9999999987322111 0125799999999999999999875567788888777654
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.97 E-value=9.6e-30 Score=234.47 Aligned_cols=260 Identities=14% Similarity=0.148 Sum_probs=186.0
Q ss_pred CCCCCCCcceEEEccCCCEEEEE------------eCCCeEEEEECCC---ceEEeeeecCCCCccccCCCccccCCCCC
Q 048181 29 FPPKAFGGESIAFEPVGGAFYTG------------VADGRILKYQAPD---GFTDFAFTTPTRSKAVCDGTTNLDLGPIC 93 (310)
Q Consensus 29 ~~~~~~~Pegia~d~~G~l~~~d------------~~~g~I~r~~~~g---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (310)
+++-..+||+|+++++|.+|.+. ...|+|+++++++ +.+.+...+. .+....
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~-------------~~~~~~ 111 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN-------------TLDISS 111 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS-------------SCCGGG
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC-------------CCCcCc
Confidence 35434699999999998766554 2689999999872 3334332110 011235
Q ss_pred CceeeEEEecC-CC--eEEEEeCCC-----cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCc
Q 048181 94 RRTFGLALHYA-TR--QLYIADAYS-----GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDF 165 (310)
Q Consensus 94 ~~P~Gla~d~~-~g--~LyVad~~~-----gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~ 165 (310)
.+|+||.+... +| +|||+++.. ++++++++++.. ++...+.++++++|||+++++ +|++|+|++..--..
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~-~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~ 189 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSL-LHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDP 189 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEE-EEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEE-EEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCc
Confidence 69999998531 34 799999874 288999887654 455667788999999999999 599999987431000
Q ss_pred cceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce---eeecCC
Q 048181 166 RTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF---DIINFQ 242 (310)
Q Consensus 166 ~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~---~~~~l~ 242 (310)
.....+.....+.|+||++|+. +++++.+++.+||||++||||++|||+|+..++|++|+++.. |.. ++..++
T Consensus 190 ~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~--g~l~~~~~~~~~ 265 (355)
T 3sre_A 190 YLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN--WTLTPLRVLSFD 265 (355)
T ss_dssp HHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT--SCEEEEEEEECS
T ss_pred ccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCC--CcEecCEEEeCC
Confidence 0000001123467999999984 677888999999999999999999999999999999999743 332 224557
Q ss_pred CCCceeeeCCCCC-CcEEEEEecCC------CCCCCCceeeEEEC----CCCcEEEEEecCCCccccceeEEEecCCCC
Q 048181 243 AKPHNIKRNPGLL-QTFWEAAIITR------QPAGTPVPIGQRIS----AFGAVLDTISFEAQYSTTPISEVQPFGGAL 310 (310)
Q Consensus 243 g~Pdgl~~d~~~d-G~l~va~~~~~------~~~~~~~~~v~~~~----~~G~~~~~~~~p~~~~~~~~t~~~~~~~~l 310 (310)
+.||||++|+ + |+||+|++... +|.......+.|+. +++++.+++.. +|..++.+|.+.+++|+|
T Consensus 266 g~PDGi~vD~--e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L 341 (355)
T 3sre_A 266 TLVDNISVDP--VTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKL 341 (355)
T ss_dssp SEEEEEEECT--TTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEE
T ss_pred CCCceEEEeC--CCCcEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEE
Confidence 8999999998 7 99999875331 11111234566665 57888888888 677899999999999986
No 3
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.96 E-value=5.4e-28 Score=217.43 Aligned_cols=230 Identities=13% Similarity=0.145 Sum_probs=178.4
Q ss_pred CCCCCCCcceEEEccC-CCEEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC
Q 048181 29 FPPKAFGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 29 ~~~~~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g 106 (310)
+..++..+||++|+++ +.+||+|+.+++|++++++++.. .+. ....|.+++++ ++|
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---------------------~~~~~~~i~~~-~dG 65 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT---------------------MDAPVSSVALR-QSG 65 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE---------------------CSSCEEEEEEB-TTS
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe---------------------CCCceEEEEEC-CCC
Confidence 3446678999999985 78999999999999999986533 221 12468899997 788
Q ss_pred eEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 107 QLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 107 ~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
+||++. ..+|+++|+++++.+.+.....+.+.+.||++++|+ +|++|++++....... ......++||++++
T Consensus 66 ~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~------~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 66 GYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPA------VLERHQGALYSLFP 137 (297)
T ss_dssp SEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTT------BCCTTCEEEEEECT
T ss_pred CEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccc------cccCCCcEEEEEEC
Confidence 999987 457999999988887766554455678899999999 5999999864311000 01134578999998
Q ss_pred CCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce---ee-ecC---CCCCceeeeCCCCCCcEE
Q 048181 187 RSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF---DI-INF---QAKPHNIKRNPGLLQTFW 259 (310)
Q Consensus 187 ~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~---~~-~~l---~g~Pdgl~~d~~~dG~l~ 259 (310)
+ +++..+...+..||||+++|||++||++++..++|++|+++.. .|.. ++ ..+ .+.||||++|+ +|+||
T Consensus 138 ~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~-~G~~~~~~~~~~~~~~~~~p~g~~~d~--~G~lw 213 (297)
T 3g4e_A 138 D-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ-TGQISNRRSVYKLEKEEQIPDGMCIDA--EGKLW 213 (297)
T ss_dssp T-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT-TCCEEEEEEEEECCGGGCEEEEEEEBT--TSCEE
T ss_pred C-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCC-CCcccCcEEEEECCCCCCCCCeeEECC--CCCEE
Confidence 6 6777777888899999999999999999999999999998532 2322 22 222 36799999999 99999
Q ss_pred EEEecCCCCCCCCceeeEEECCC-CcEEEEEecCCCccccceeEEE
Q 048181 260 EAAIITRQPAGTPVPIGQRISAF-GAVLDTISFEAQYSTTPISEVQ 304 (310)
Q Consensus 260 va~~~~~~~~~~~~~~v~~~~~~-G~~~~~~~~p~~~~~~~~t~~~ 304 (310)
++.+... +|.++|++ |+++..+..|.. .++.++
T Consensus 214 va~~~~~--------~v~~~d~~tG~~~~~i~~p~~----~~t~~~ 247 (297)
T 3g4e_A 214 VACYNGG--------RVIRLDPVTGKRLQTVKLPVD----KTTSCC 247 (297)
T ss_dssp EEEETTT--------EEEEECTTTCCEEEEEECSSS----BEEEEE
T ss_pred EEEcCCC--------EEEEEcCCCceEEEEEECCCC----CceEEE
Confidence 9998763 79999997 999999999964 455554
No 4
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.96 E-value=7.5e-28 Score=217.17 Aligned_cols=234 Identities=15% Similarity=0.117 Sum_probs=177.2
Q ss_pred ceEEEeCCCCCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
.++++. .++..+||++|+++|+ |||++..+++|++++++++...+.. ....|+|+++
T Consensus 36 ~~~~l~--~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~--------------------~~~~~~gl~~ 93 (305)
T 3dr2_A 36 RLLTLY--DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLD--------------------ATAFTNGNAV 93 (305)
T ss_dssp CCEEEE--CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEE--------------------SCSCEEEEEE
T ss_pred ceEEEe--cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeC--------------------CCCccceeeE
Confidence 444443 3567899999999987 9999999999999999776555431 2346899999
Q ss_pred ecCCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCce
Q 048181 102 HYATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGR 180 (310)
Q Consensus 102 d~~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~ 180 (310)
+ ++|+||+++.. .+|.+++++ ++.+.+.....+.+++.||++++++ +|++||||+...................+.
T Consensus 94 d-~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~ 170 (305)
T 3dr2_A 94 D-AQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHS 170 (305)
T ss_dssp C-TTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEE
T ss_pred C-CCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCe
Confidence 8 78999999876 569999987 5666666555667788999999999 599999997431100000000001123478
Q ss_pred EEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCC-----CeEEEEEecCCCCCceee-ec-CCCCCceeeeCCC
Q 048181 181 LLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTG-----NRTLKYWLRGPRANSFDI-IN-FQAKPHNIKRNPG 253 (310)
Q Consensus 181 l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~-----~~I~~~~~~~~~~g~~~~-~~-l~g~Pdgl~~d~~ 253 (310)
|+++|+++++++.+. .+..|||++++|||+.||++++.. ++|++|++++......++ .. ..+.||||++|+
T Consensus 171 v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~- 248 (305)
T 3dr2_A 171 VYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR- 248 (305)
T ss_dssp EEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-
T ss_pred EEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-
Confidence 999999888887777 888999999999999999999874 899999987532111222 22 357899999999
Q ss_pred CCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCC
Q 048181 254 LLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQ 294 (310)
Q Consensus 254 ~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~ 294 (310)
+|+||++... .|.+++++|+.+..+..|.+
T Consensus 249 -~G~lwv~~~~----------gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 249 -GGWLWSSSGT----------GVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp -TSCEEECCSS----------EEEEECTTSCEEEEEECSSC
T ss_pred -CCCEEEecCC----------cEEEECCCCCEEEEEECCCc
Confidence 9999999832 59999999999999998863
No 5
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.95 E-value=1.1e-25 Score=201.42 Aligned_cols=234 Identities=14% Similarity=0.135 Sum_probs=178.4
Q ss_pred eecceEEEeCCCCCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceee
Q 048181 20 SIPTFTKILFPPKAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFG 98 (310)
Q Consensus 20 ~~~~~~~~~~~~~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~G 98 (310)
+.+.++.+. ..+..||+++|+++|+ +||++..+++|++++++++...+. .....|.+
T Consensus 16 ~~~~~~~l~--~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~~~ 73 (296)
T 3e5z_A 16 AGAEARRLA--DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEM--------------------HPSHHQNG 73 (296)
T ss_dssp TTCCCEEEE--CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEE--------------------SSCSSEEE
T ss_pred CCCcEEEEe--cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEE--------------------CCCCCcce
Confidence 445666665 3467899999999998 999999999999999987643332 12356899
Q ss_pred EEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCcc-CccceeEeeeecC
Q 048181 99 LALHYATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVY-DFRTIVKLNITND 176 (310)
Q Consensus 99 la~d~~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~-~~~~~~~~~~~~~ 176 (310)
|+++ ++|+||+++.. .+|.++|+++++.+.+.....+.++..||++++++ +|++|+||+.... ....... .....
T Consensus 74 l~~~-~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~-~~~~~ 150 (296)
T 3e5z_A 74 HCLN-KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYG-GEMEL 150 (296)
T ss_dssp EEEC-TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSC-CCCCS
T ss_pred eeEC-CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCcccccccccccc-ccccC
Confidence 9998 78999999876 56999999777776665444555678899999999 5999999874210 0000000 00112
Q ss_pred CCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce----eee-cCCCCCceeeeC
Q 048181 177 STGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF----DII-NFQAKPHNIKRN 251 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~----~~~-~l~g~Pdgl~~d 251 (310)
..++|++++++ ++++.+...+..||||+++|||+.| ++++..++|++|+++.. |.. ++. ...+.|++|++|
T Consensus 151 ~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~--g~~~~~~~~~~~~~~~p~~i~~d 226 (296)
T 3e5z_A 151 PGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNAR--GETEYQGVHFTVEPGKTDGLRVD 226 (296)
T ss_dssp SSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSS--SCEEEEEEEECCSSSCCCSEEEB
T ss_pred CCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCC--CcCcCCCeEeeCCCCCCCeEEEC
Confidence 34689999997 8888888888899999999999977 99999999999998632 333 122 234679999999
Q ss_pred CCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCC
Q 048181 252 PGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQ 294 (310)
Q Consensus 252 ~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~ 294 (310)
+ +|+||++. .. .|.+++++|+.+..+..|.+
T Consensus 227 ~--~G~l~v~~-~~---------~v~~~~~~g~~~~~~~~~~~ 257 (296)
T 3e5z_A 227 A--GGLIWASA-GD---------GVHVLTPDGDELGRVLTPQT 257 (296)
T ss_dssp T--TSCEEEEE-TT---------EEEEECTTSCEEEEEECSSC
T ss_pred C--CCCEEEEc-CC---------eEEEECCCCCEEEEEECCCC
Confidence 9 99999999 33 79999999999999998864
No 6
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.95 E-value=3.7e-26 Score=206.53 Aligned_cols=224 Identities=15% Similarity=0.096 Sum_probs=166.6
Q ss_pred ecceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEE
Q 048181 21 IPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLA 100 (310)
Q Consensus 21 ~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla 100 (310)
...+.+++.+ ..||+++|+++|++||+|..+++|++++++++...+. .....|.||+
T Consensus 22 ~~~~~~~p~~---~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~--------------------~~~~~p~gia 78 (306)
T 2p4o_A 22 AKIITSFPVN---TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHA--------------------TVEGKVSGLA 78 (306)
T ss_dssp EEEEEEECTT---CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE--------------------ECSSEEEEEE
T ss_pred ceEeEeCCCC---CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEE--------------------eCCCCceeEE
Confidence 3344455443 5799999999999999999999999999988654432 1234799999
Q ss_pred EecCCCeEEEEeCCC---cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCC
Q 048181 101 LHYATRQLYIADAYS---GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDS 177 (310)
Q Consensus 101 ~d~~~g~LyVad~~~---gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~ 177 (310)
++ ++|+|||++... .|++++..+++++.+.... ...++|++++.+ ++++|++|..
T Consensus 79 ~~-~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~---~~~~~~g~~~~~-~~~~~v~d~~----------------- 136 (306)
T 2p4o_A 79 FT-SNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP---DAIFLNGITPLS-DTQYLTADSY----------------- 136 (306)
T ss_dssp EC-TTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT---TCSCEEEEEESS-SSEEEEEETT-----------------
T ss_pred Ec-CCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC---CccccCcccccC-CCcEEEEECC-----------------
Confidence 97 789999999642 3899998888776665432 245689999887 5899999864
Q ss_pred CceEEEEcCCCCeEEEe-----------ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCC-CCCceee-ecCCCC
Q 048181 178 TGRLLSYNPRSSQVTVL-----------LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGP-RANSFDI-INFQAK 244 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~-----------~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~-~~g~~~~-~~l~g~ 244 (310)
+|+||++|+.+++.++. ...+..|||| ++||++|||+++.+++|++|++++. ..+..++ ..+ ..
T Consensus 137 ~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~ 213 (306)
T 2p4o_A 137 RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TN 213 (306)
T ss_dssp TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CC
T ss_pred CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CC
Confidence 37899999875533322 2356789999 8899999999999999999999752 2222333 333 46
Q ss_pred CceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEE
Q 048181 245 PHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQ 304 (310)
Q Consensus 245 Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~ 304 (310)
|+||++|+ +|+|||+.+... +|.+++++|++.....++.+ +...+.++
T Consensus 214 P~gi~vd~--dG~l~va~~~~~--------~V~~~~~~G~~~~~~~~~~~--~~~p~~~a 261 (306)
T 2p4o_A 214 IDDFAFDV--EGNLYGATHIYN--------SVVRIAPDRSTTIIAQAEQG--VIGSTAVA 261 (306)
T ss_dssp CSSEEEBT--TCCEEEECBTTC--------CEEEECTTCCEEEEECGGGT--CTTEEEEE
T ss_pred CCCeEECC--CCCEEEEeCCCC--------eEEEECCCCCEEEEeecccc--cCCceEEE
Confidence 99999999 999999998763 79999999998654444433 23555555
No 7
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.94 E-value=3.4e-24 Score=197.77 Aligned_cols=208 Identities=16% Similarity=0.175 Sum_probs=163.2
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
.+..|++++||+ ++.+||+|..+++|+|++++++. +.+. ......|.||++|..+++||
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-------------------~~~~~~p~glavd~~~g~ly 131 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-------------------STGLESPGGLAVDWVHDKLY 131 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSCCCEEEEETTTTEEE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-------------------eCCCCCccEEEEecCCCeEE
Confidence 467899999995 57899999999999999998753 3322 12345789999996689999
Q ss_pred EEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++|... .|.++++++...+.+.. ..+..|+++++||.+|.||+||... .++|++++.+.
T Consensus 132 ~~d~~~~~I~~~~~dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~~----------------~~~I~r~~~dG 191 (349)
T 3v64_C 132 WTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMDG 191 (349)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTS
T ss_pred EEcCCCCeEEEEcCCCCceEEEEe----CCCCCcceEEEecCcCeEEEeccCC----------------CCEEEEEeCCC
Confidence 999875 49999988765444432 2467899999998679999999753 36899999875
Q ss_pred CeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 189 SQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 189 g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
...+.+. .++..||||++|++++.||++|+..++|++++++|. ....+ ..+ +.|+||+++ +|+||++++..
T Consensus 192 ~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~--~~~~~~~~~~-~~P~giav~---~~~ly~td~~~ 265 (349)
T 3v64_C 192 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS--HRKAVISQGL-PHPFAITVF---EDSLYWTDWHT 265 (349)
T ss_dssp CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSSC-SSEEEEEEE---TTEEEEEETTT
T ss_pred CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC--ceEEEEeCCC-CCceEEEEE---CCEEEEecCCC
Confidence 4444443 578899999999988899999999999999999874 22222 333 479999996 57999999987
Q ss_pred CCCCCCCceeeEEEC-CCCcEEEEEecC
Q 048181 266 RQPAGTPVPIGQRIS-AFGAVLDTISFE 292 (310)
Q Consensus 266 ~~~~~~~~~~v~~~~-~~G~~~~~~~~p 292 (310)
. .|.+++ .+|+.+..+..+
T Consensus 266 ~--------~V~~~~~~~G~~~~~i~~~ 285 (349)
T 3v64_C 266 K--------SINSANKFTGKNQEIIRNK 285 (349)
T ss_dssp T--------EEEEEETTTCCSCEEEECS
T ss_pred C--------eEEEEEccCCCccEEeccC
Confidence 4 899998 689988888754
No 8
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.94 E-value=2.3e-24 Score=201.58 Aligned_cols=208 Identities=16% Similarity=0.179 Sum_probs=163.5
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
.+..|++++||+ ++.|||+|..+++|+|++++++. +.+. ......|.||++|..+++||
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-------------------~~~~~~p~glavd~~~g~lY 174 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-------------------STGLESPGGLAVDWVHDKLY 174 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-------------------CSSCSCCCCEEEETTTTEEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-------------------eCCCCCccEEEEEeCCCeEE
Confidence 467899999995 57899999999999999998763 3322 12345799999996689999
Q ss_pred EEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++|... .|.++++++...+.+.. ..+..|+++++||.+|.||+||... .++|++++++.
T Consensus 175 ~~d~~~~~I~~~~~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~~dG 234 (386)
T 3v65_B 175 WTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMDG 234 (386)
T ss_dssp EEETTTTEEEECBTTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTS
T ss_pred EEcCCCCeEEEEeCCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccCC----------------CCEEEEEeCCC
Confidence 999875 48899988765444432 2467899999998779999999753 36899999875
Q ss_pred CeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 189 SQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 189 g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
...+.+. .++..||||+++++++.||++|+..++|++++++|. ....+ .++ +.|+||++++ ++||++++..
T Consensus 235 ~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~~-~~P~giav~~---~~ly~td~~~ 308 (386)
T 3v65_B 235 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS--HRKAVISQGL-PHPFAITVFE---DSLYWTDWHT 308 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC--SCEEEECSSC-SSEEEEEEET---TEEEEEETTT
T ss_pred CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC--eeEEEEECCC-CCceEEEEEC---CEEEEeeCCC
Confidence 4444443 578899999999988899999999999999999863 22223 333 4799999964 7999999876
Q ss_pred CCCCCCCceeeEEEC-CCCcEEEEEecC
Q 048181 266 RQPAGTPVPIGQRIS-AFGAVLDTISFE 292 (310)
Q Consensus 266 ~~~~~~~~~~v~~~~-~~G~~~~~~~~p 292 (310)
. .|.+++ ++|+.+..+..+
T Consensus 309 ~--------~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 309 K--------SINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp T--------EEEEEETTTCCSCEEEECS
T ss_pred C--------eEEEEECCCCcceEEEccC
Confidence 4 899999 789988888765
No 9
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.94 E-value=3.4e-24 Score=195.38 Aligned_cols=220 Identities=15% Similarity=0.136 Sum_probs=167.2
Q ss_pred cceEEEeCCCC----------CCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCcccc
Q 048181 22 PTFTKILFPPK----------AFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLD 88 (310)
Q Consensus 22 ~~~~~~~~~~~----------~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~ 88 (310)
+.+..+.+.+. +..|.+++||+ ++.|||+|+.+++|+|++++++. ..+..
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~----------------- 75 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----------------- 75 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-----------------
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-----------------
Confidence 45666666543 34688899997 58899999999999999998652 12110
Q ss_pred CCCCCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccc
Q 048181 89 LGPICRRTFGLALHYATRQLYIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRT 167 (310)
Q Consensus 89 ~~~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~ 167 (310)
.....|.||++|..+++||++|... .|.++++++...+.+.. ..+..|+++++|+.+|.||+||...
T Consensus 76 --~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~~~~P~giavdp~~g~ly~td~~~------ 143 (318)
T 3sov_A 76 --SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWGE------ 143 (318)
T ss_dssp --ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSSEEEEEEEGGGTEEEEEECSS------
T ss_pred --CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe----CCCCCccEEEEeCCCCEEEEEecCC------
Confidence 2345799999986689999999875 49999998765555432 2467899999998679999999642
Q ss_pred eeEeeeecCCCceEEEEcCCCCeEEEe-ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCC
Q 048181 168 IVKLNITNDSTGRLLSYNPRSSQVTVL-LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKP 245 (310)
Q Consensus 168 ~~~~~~~~~~~G~l~~~d~~~g~~~~~-~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~P 245 (310)
.++|++++++....+.+ ..++..||||++|++++.||++|+..++|++++++|.. ...+ ..-.+.|
T Consensus 144 ----------~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~--~~~~~~~~~~~P 211 (318)
T 3sov_A 144 ----------VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN--RQAVVKGSLPHP 211 (318)
T ss_dssp ----------SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSCCSCE
T ss_pred ----------CCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc--eEEEecCCCCCc
Confidence 36899999874444444 36788999999999888999999999999999998742 2222 2223479
Q ss_pred ceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecCC
Q 048181 246 HNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFEA 293 (310)
Q Consensus 246 dgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~ 293 (310)
+||++++ +.+|++++..+ .|.++++ +|+.++.+..+.
T Consensus 212 ~glav~~---~~lywtd~~~~--------~V~~~~~~~G~~~~~i~~~~ 249 (318)
T 3sov_A 212 FALTLFE---DILYWTDWSTH--------SILACNKYTGEGLREIHSDI 249 (318)
T ss_dssp EEEEEET---TEEEEEETTTT--------EEEEEETTTCCSCEEEECCC
T ss_pred eEEEEeC---CEEEEEecCCC--------eEEEEECCCCCceEEEeCCC
Confidence 9999987 57888888763 8999998 799888887653
No 10
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.93 E-value=8.8e-24 Score=192.26 Aligned_cols=208 Identities=14% Similarity=0.125 Sum_probs=157.8
Q ss_pred CCCCcceEEEccC-CCEEEEEeCCCeEEEEECCC----ce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 32 KAFGGESIAFEPV-GGAFYTGVADGRILKYQAPD----GF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 32 ~~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g----~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
.+..|++++||++ +.+||+|..+++|++++.++ +. +.+. ......|.||++|..+
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-------------------~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------------SRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-------------------CSSCSCCCEEEEETTT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-------------------eCCCCCcCEEEEeecC
Confidence 4678999999975 68999999999999999886 22 2111 1234579999998568
Q ss_pred CeEEEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 106 RQLYIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 106 g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++||++|... .|.++++++...+.+... .+..|+++++||.+|++|++|... .++|+++
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~~----------------~~~I~~~ 148 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKG 148 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEEC----CCCCcceEEeCCCCCEEEEEccCC----------------CCeEEEE
Confidence 8999999865 499999987655555431 356899999998679999999642 3689999
Q ss_pred cCCCCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-e--cCCCCCceeeeCCCCCCcEEE
Q 048181 185 NPRSSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I--NFQAKPHNIKRNPGLLQTFWE 260 (310)
Q Consensus 185 d~~~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~--~l~g~Pdgl~~d~~~dG~l~v 260 (310)
+++....+.+. ..+..||||+++++++.||++|+..++|++++++|... ..+ . .....|+||+++. |+||+
T Consensus 149 ~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~--~~~~~~~~~~~~P~giav~~---~~ly~ 223 (316)
T 1ijq_A 149 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFE---DKVFW 223 (316)
T ss_dssp ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEET---TEEEE
T ss_pred cCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce--EEEeecCCccCCcEEEEEEC---CEEEE
Confidence 98744444443 57889999999999889999999999999999986421 222 2 1234799999975 79999
Q ss_pred EEecCCCCCCCCceeeEEECC-CCcEEEEEec
Q 048181 261 AAIITRQPAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 261 a~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
+++... +|.++++ +|+.++.+..
T Consensus 224 ~d~~~~--------~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 224 TDIINE--------AIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EETTTT--------EEEEEETTTCCCCEEEEC
T ss_pred EECCCC--------eEEEEeCCCCcceEEEec
Confidence 998764 8999997 7887777653
No 11
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.93 E-value=2.3e-23 Score=184.01 Aligned_cols=208 Identities=16% Similarity=0.133 Sum_probs=157.8
Q ss_pred CCcceEEEccC-CCEEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 34 FGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
..|+++++|++ +.+||+|..+++|++++++++.. .+. ......|.||++|+.+++||++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-------------------~~~~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-------------------RQDLGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-------------------CTTCCCEEEEEEETTTTEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-------------------ECCCCCccEEEEEecCCeEEEE
Confidence 35789999985 68999999999999999987532 221 1234589999998557899999
Q ss_pred eCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 112 DAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 112 d~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
|... .|.+++.++...+.+... .+..|+++++|+++|+||++|... .+++|++++.+...
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDT----GLVNPRGIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTN 157 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECS----SCSSEEEEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCC
T ss_pred ECCCCEEEEEEcCCCCEEEEEEC----CCCCccEEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCC
Confidence 9865 499999886544444321 356899999999669999999642 13688888876444
Q ss_pred EEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcEEEEEecCCCCC
Q 048181 191 VTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAIITRQPA 269 (310)
Q Consensus 191 ~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~ 269 (310)
.+.+. ..+..|+||+++++++.||+++...++|+++++++.. ...+......|+||++|. |+||++++...
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~--~~~~~~~~~~P~gi~~d~---~~lyva~~~~~--- 229 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG--RRKVLEGLQYPFAVTSYG---KNLYYTDWKTN--- 229 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE--EEEEEECCCSEEEEEEET---TEEEEEETTTT---
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc--eEEEecCCCCceEEEEeC---CEEEEEECCCC---
Confidence 44443 5678999999999988999999999999999987521 112222234799999985 79999998863
Q ss_pred CCCceeeEEECCC-CcEEEEEecC
Q 048181 270 GTPVPIGQRISAF-GAVLDTISFE 292 (310)
Q Consensus 270 ~~~~~~v~~~~~~-G~~~~~~~~p 292 (310)
.|.++|++ |+++..+...
T Consensus 230 -----~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 230 -----SVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp -----EEEEEETTTTEEEEEECCS
T ss_pred -----eEEEEeCCCCCceEEEccc
Confidence 79999986 8999888654
No 12
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.93 E-value=3.3e-23 Score=188.92 Aligned_cols=234 Identities=14% Similarity=0.130 Sum_probs=174.6
Q ss_pred eeecceEEEeCCCCCCCcceEEEccC-CCEEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCce
Q 048181 19 FSIPTFTKILFPPKAFGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRT 96 (310)
Q Consensus 19 ~~~~~~~~~~~~~~~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P 96 (310)
-++++++.+. ...+..+|+++|+++ +.+||++..+++|++++++++.. .+. ....+
T Consensus 35 ~~~~~~~~~~-~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---------------------~~~~v 92 (326)
T 2ghs_A 35 VFPFAGRVLD-ETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA---------------------LPFMG 92 (326)
T ss_dssp EECCCCEEEE-CSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE---------------------CSSCE
T ss_pred ccccceEEee-ccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE---------------------CCCcc
Confidence 3444566653 334567999999997 67999999999999999986543 221 12357
Q ss_pred eeEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecC
Q 048181 97 FGLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITND 176 (310)
Q Consensus 97 ~Gla~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~ 176 (310)
.+++++ ++|++||+. ..+|+++|+++++.+.+.....+.+.+.+|++++|+ +|++|+++.... ...
T Consensus 93 ~~i~~~-~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~-----------~~~ 158 (326)
T 2ghs_A 93 SALAKI-SDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRK-----------AET 158 (326)
T ss_dssp EEEEEE-ETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETT-----------CCT
T ss_pred eEEEEe-CCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCc-----------CCC
Confidence 889997 689999986 457999999888776654432333456799999999 599999875321 012
Q ss_pred CCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec--CC-CCCceee-ec---CCCCCceee
Q 048181 177 STGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR--GP-RANSFDI-IN---FQAKPHNIK 249 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~--~~-~~g~~~~-~~---l~g~Pdgl~ 249 (310)
..+.||+++ +++++.+......||||++++||+.||++++..++|++|+++ .. .....++ .. ..+.|++++
T Consensus 159 ~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~ 236 (326)
T 2ghs_A 159 GAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSV 236 (326)
T ss_dssp TCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEE
T ss_pred CceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeE
Confidence 357899999 477777666777899999999999999999999999999986 21 1111122 22 235799999
Q ss_pred eCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEE
Q 048181 250 RNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQ 304 (310)
Q Consensus 250 ~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~ 304 (310)
+|+ +|+||++.+... .+.+++++|+++..+..|.. .++.++
T Consensus 237 ~d~--~G~lwva~~~~~--------~v~~~d~~g~~~~~i~~~~~----~~~~~a 277 (326)
T 2ghs_A 237 CDA--EGHIWNARWGEG--------AVDRYDTDGNHIARYEVPGK----QTTCPA 277 (326)
T ss_dssp ECT--TSCEEEEEETTT--------EEEEECTTCCEEEEEECSCS----BEEEEE
T ss_pred ECC--CCCEEEEEeCCC--------EEEEECCCCCEEEEEECCCC----CcEEEE
Confidence 999 999999998653 79999999999999998864 455554
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.93 E-value=5.3e-23 Score=193.20 Aligned_cols=226 Identities=14% Similarity=0.130 Sum_probs=168.2
Q ss_pred Cceeee-ecceEEEeCCC--------CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce-----EEeeeecCCCCcc
Q 048181 15 PRMVFS-IPTFTKILFPP--------KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF-----TDFAFTTPTRSKA 79 (310)
Q Consensus 15 ~~~~~~-~~~~~~~~~~~--------~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~-----~~~~~~~~~~~~~ 79 (310)
|.+.++ .+.+..+.+.+ .+..|.+|+||+ ++.|||+|..+++|+|++.++.. ..+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~--------- 154 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--------- 154 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE---------
T ss_pred ceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE---------
Confidence 333343 35566665543 467899999997 57899999999999999988621 2211
Q ss_pred ccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEc
Q 048181 80 VCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTD 158 (310)
Q Consensus 80 ~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd 158 (310)
......|.||++|..+++||++|... .|.++++++...+.+... .+..|++|++||.+|.||+||
T Consensus 155 ----------~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 155 ----------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp ----------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTEEEEEE
T ss_pred ----------eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC----CCCCcceEEEecccCeEEEEe
Confidence 12456899999995589999999875 499999988665555432 456799999998779999999
Q ss_pred CCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe-ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee
Q 048181 159 ASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL-LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~-~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~ 237 (310)
... .++|++++.+....+.+ ..++..||||++|++++.||++|+..++|++++++|.. ...
T Consensus 221 ~~~----------------~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~--~~~ 282 (400)
T 3p5b_L 221 WGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKT 282 (400)
T ss_dssp CSS----------------SCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--CEE
T ss_pred CCC----------------CCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc--cEE
Confidence 753 25799999875444444 45788999999999888999999999999999998742 222
Q ss_pred e-e--cCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEEC-CCCcEEEEEecC
Q 048181 238 I-I--NFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRIS-AFGAVLDTISFE 292 (310)
Q Consensus 238 ~-~--~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~-~~G~~~~~~~~p 292 (310)
+ . .....|.||+++. +.||++++... .|.++| .+|+.+..+..+
T Consensus 283 ~~~~~~~l~~P~gl~v~~---~~lywtd~~~~--------~V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 283 ILEDEKRLAHPFSLAVFE---DKVFWTDIINE--------AIFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp EEECSSTTSSEEEEEEET---TEEEEEESSSC--------SEEEEESSSCCCCEEEECS
T ss_pred EEeCCCCCCCCEEEEEeC---CEEEEecCCCC--------eEEEEEcCCCCceEEEecC
Confidence 2 2 1124699999975 68999988763 799999 689888888754
No 14
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.92 E-value=4e-23 Score=185.02 Aligned_cols=231 Identities=17% Similarity=0.215 Sum_probs=169.9
Q ss_pred CCCCCCcceEEEccCCCEEEE-------EeCCCeEEEEECC-CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 30 PPKAFGGESIAFEPVGGAFYT-------GVADGRILKYQAP-DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~-------d~~~g~I~r~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
...+..|++++|+++|++|++ +..+++|+++++. ++...+... ........|.++++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---------------~~~~~~~~~~~i~~ 78 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP---------------EVNGYGGIPAGCQC 78 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC---------------EETTEECCEEEEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEec---------------ccCCCCCCCceEEE
Confidence 567889999999999998888 6778999999965 444433210 00012356899999
Q ss_pred ecCC-CeEEEEeCCCcEEEEeCCCCeEEEe-eccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCc
Q 048181 102 HYAT-RQLYIADAYSGLLVVGPNGRLATQL-ATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTG 179 (310)
Q Consensus 102 d~~~-g~LyVad~~~gi~~id~~~~~~~~~-~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G 179 (310)
+ ++ |+|||++...+|++++++ ++...+ .....+.+...|+++++++ +|++|+++........++.. ......+
T Consensus 79 ~-~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~--~~~~~~~ 153 (314)
T 1pjx_A 79 D-RDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTR--SMQEKFG 153 (314)
T ss_dssp C-SSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCB--TTSSSCE
T ss_pred e-cCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccc--cccCCCC
Confidence 8 66 999999987789999998 676655 4433344567899999999 59999998753100000000 0112347
Q ss_pred eEEEEcCCCCeEEEeecCCCCCceeEEc----cCCCEEEEEecCCCeEEEEEecCCCCCce---ee-ecCC----CCCce
Q 048181 180 RLLSYNPRSSQVTVLLRNLTGPAGVAIS----VDSSFLLVSEFTGNRTLKYWLRGPRANSF---DI-INFQ----AKPHN 247 (310)
Q Consensus 180 ~l~~~d~~~g~~~~~~~~l~~pnGIa~~----~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~---~~-~~l~----g~Pdg 247 (310)
.|+++|++ ++.+.+...+..|++++++ +||+.||++++..++|++|+++.. +.. +. ..++ +.|++
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~--g~~~~~~~~~~~~~~~~~~p~~ 230 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP--AKIENKKVWGHIPGTHEGGADG 230 (314)
T ss_dssp EEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET--TEEEEEEEEEECCCCSSCEEEE
T ss_pred eEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC--CccccceEEEECCCCCCCCCCc
Confidence 89999987 7777766777789999999 999889999999999999998621 221 12 2333 56999
Q ss_pred eeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCC-CcEEEEEecCC
Q 048181 248 IKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAF-GAVLDTISFEA 293 (310)
Q Consensus 248 l~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~-G~~~~~~~~p~ 293 (310)
|++|+ +|++|++..... .+.++|++ |+.+..+..|.
T Consensus 231 i~~d~--~G~l~v~~~~~~--------~i~~~d~~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 231 MDFDE--DNNLLVANWGSS--------HIEVFGPDGGQPKMRIRCPF 267 (314)
T ss_dssp EEEBT--TCCEEEEEETTT--------EEEEECTTCBSCSEEEECSS
T ss_pred eEECC--CCCEEEEEcCCC--------EEEEEcCCCCcEeEEEeCCC
Confidence 99999 999999987653 79999998 99888888774
No 15
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.91 E-value=4.4e-22 Score=196.89 Aligned_cols=205 Identities=16% Similarity=0.186 Sum_probs=163.9
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
++..|.+|++|+ ++.+||+|..+++|+|++.+++. +.+. ......|.|||+|...++||
T Consensus 35 ~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~-------------------~~g~~~P~GlAvD~~~~~LY 95 (628)
T 4a0p_A 35 GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV-------------------EFGLDYPEGMAVDWLGKNLY 95 (628)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSCCCEEEEETTTTEEE
T ss_pred CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE-------------------eCCCCCcceEEEEeCCCEEE
Confidence 467899999997 47899999999999999998753 3322 12345799999996689999
Q ss_pred EEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++|...+ |.++++++...+.+.. ..+..|+++++||..|.||+||.+. .++|++++++.
T Consensus 96 ~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g~----------------~~~I~r~~~dG 155 (628)
T 4a0p_A 96 WADTGTNRIEVSKLDGQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWGG----------------KPKIDRAAMDG 155 (628)
T ss_dssp EEETTTTEEEEEETTSTTCEEEEC----SSCCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTS
T ss_pred EEECCCCEEEEEecCCCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCCC----------------CCEEEEEeCCC
Confidence 9998754 8999998765555542 2467899999998679999999752 36899999986
Q ss_pred CeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCC
Q 048181 189 SQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 189 g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
...+.+.+.+..||||++|++++.||++|+..++|++++++|... ++ ..++ .|.||++++ ++||++++...
T Consensus 156 ~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~-~P~glav~~---~~ly~tD~~~~ 228 (628)
T 4a0p_A 156 SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDLP-HPFGLTQYQ---DYIYWTDWSRR 228 (628)
T ss_dssp CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECCS-CEEEEEEET---TEEEEEETTTT
T ss_pred CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce---EEeeccCC-CceEEEEEC---CEEEEecCCCC
Confidence 667777789999999999999889999999999999999987432 33 4454 699999996 69999998763
Q ss_pred CCCCCCceeeEEECC-CCcEEEEEe
Q 048181 267 QPAGTPVPIGQRISA-FGAVLDTIS 290 (310)
Q Consensus 267 ~~~~~~~~~v~~~~~-~G~~~~~~~ 290 (310)
.|.++|. +|+....+.
T Consensus 229 --------~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 229 --------SIERANKTSGQNRTIIQ 245 (628)
T ss_dssp --------EEEEEETTTCCSCEEEE
T ss_pred --------EEEEEECCCCCceEEEe
Confidence 7888885 677555554
No 16
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.91 E-value=2.7e-22 Score=190.23 Aligned_cols=205 Identities=9% Similarity=0.029 Sum_probs=154.2
Q ss_pred CCCCcceEEEccC---CCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 32 KAFGGESIAFEPV---GGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 32 ~~~~Pegia~d~~---G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
+|..|++|++|++ |+|||+|.. ++|++++++++ ...+. ....+|.||+++ .+|+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~--------------------~~~~~P~giavd-~dG~ 194 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT--------------------TNIGQCADVNFT-LNGD 194 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC--------------------CCCSCEEEEEEC-TTCC
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee--------------------cCCCCccEEEEC-CCCC
Confidence 7889999999984 899999887 99999999644 44332 245679999998 6788
Q ss_pred EEEEeCC-----CcEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCce
Q 048181 108 LYIADAY-----SGLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGR 180 (310)
Q Consensus 108 LyVad~~-----~gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~ 180 (310)
|||+|.. .+++.++..++.. ..+ ..+..|+++++++++|+|||+|... ++
T Consensus 195 lyVad~~~~~~~~gv~~~~~~~~~~~~~~~------~~~~~P~giavd~~~G~lyv~d~~~-----------------~~ 251 (433)
T 4hw6_A 195 MVVVDDQSSDTNTGIYLFTRASGFTERLSL------CNARGAKTCAVHPQNGKIYYTRYHH-----------------AM 251 (433)
T ss_dssp EEEEECCSCTTSEEEEEECGGGTTCCEEEE------EECSSBCCCEECTTTCCEEECBTTC-----------------SE
T ss_pred EEEEcCCCCcccceEEEEECCCCeeccccc------cccCCCCEEEEeCCCCeEEEEECCC-----------------CE
Confidence 9999973 2477777654432 111 1467899999999559999999753 78
Q ss_pred EEEEcCCCCeE-EEee--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCC--CCceee-ec---C----------
Q 048181 181 LLSYNPRSSQV-TVLL--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPR--ANSFDI-IN---F---------- 241 (310)
Q Consensus 181 l~~~d~~~g~~-~~~~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~--~g~~~~-~~---l---------- 241 (310)
|+++|++++++ +.+. .....+++|+++|+|++|||+++.+++|+++++++.. ...... .+ .
T Consensus 252 V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 331 (433)
T 4hw6_A 252 ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTG 331 (433)
T ss_dssp EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGG
T ss_pred EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccc
Confidence 99999987776 3332 2334567899999999999999999999999987421 111111 11 0
Q ss_pred --CCCCceeee---------CCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEec
Q 048181 242 --QAKPHNIKR---------NPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISF 291 (310)
Q Consensus 242 --~g~Pdgl~~---------d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~ 291 (310)
...|.||++ |. +|+||||+.... +|.+++++|++......
T Consensus 332 a~~~~P~giav~~n~~y~~dd~--~g~lyvaD~~n~--------~I~~~~~~G~v~t~~G~ 382 (433)
T 4hw6_A 332 ARLWGPNQGIFVKNEAYAGEED--EYDFYFCDRDSH--------TVRVLTPEGRVTTYAGR 382 (433)
T ss_dssp SBCSSEEEEEEEECGGGTTSSC--CEEEEEEETTTT--------EEEEECTTSEEEEEECC
T ss_pred eEEcCCccEEEEccccccccCC--CCcEEEEECCCC--------EEEEECCCCCEEEEEeC
Confidence 125888999 99 999999999874 89999999987777654
No 17
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.90 E-value=3.3e-21 Score=176.76 Aligned_cols=230 Identities=12% Similarity=0.136 Sum_probs=153.8
Q ss_pred CCcceEEEccCCCEEEEEeC--CC--eEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 34 FGGESIAFEPVGGAFYTGVA--DG--RILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~--~g--~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
..|++++++++|++|++... ++ +|++++ +++...+. ++... .......|.|+++| ++|+||
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p----~~~~~---------~~~~~~~p~gv~~d-~~g~L~ 81 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFP----PQSGN---------AIITFDTVLGIKSD-GNGIVW 81 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESC----CCCSS---------CCCCCSCEEEEEEC-SSSEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCC----CcccC---------cccceeEeeEEEEc-CCCcEE
Confidence 47999999999998777532 34 899998 55443321 11000 11245689999998 689999
Q ss_pred EEeCC------CcEEEEeCCCCeE-EEeec-cCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 110 IADAY------SGLLVVGPNGRLA-TQLAT-GAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 110 Vad~~------~gi~~id~~~~~~-~~~~~-~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
|+|.. ..|+++|++++++ ..+.- .....+..++|++++++++|.+|++|.+.. ..+.|
T Consensus 82 v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i 147 (343)
T 2qe8_A 82 MLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKAAL 147 (343)
T ss_dssp EEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGCEE
T ss_pred EEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCCeE
Confidence 99975 4699999988774 33321 111234568899999975689999997321 01334
Q ss_pred EEEcCCCCeEEEeecC------------------------------CCCCceeEEccCCCEEEEEecCCCeEEEEEecC-
Q 048181 182 LSYNPRSSQVTVLLRN------------------------------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG- 230 (310)
Q Consensus 182 ~~~d~~~g~~~~~~~~------------------------------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~- 230 (310)
+++|+.+++...+.++ ...||||+++|||++||++++..++|++++.+.
T Consensus 148 ~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~ 227 (343)
T 2qe8_A 148 IRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADL 227 (343)
T ss_dssp EEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHH
T ss_pred EEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHh
Confidence 4444443333222111 135899999999999999999999999998641
Q ss_pred --CCCCceee------ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecCCCcccccee
Q 048181 231 --PRANSFDI------INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFEAQYSTTPIS 301 (310)
Q Consensus 231 --~~~g~~~~------~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~~~~~~~~t 301 (310)
...+..++ .+-.+.||||++|+ +|+||++++..+ .|.++|+ +|++...+..|. ...++
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~g~pdgia~d~--~G~l~va~~~~~--------~V~~~d~~~G~~~~~~~~~~---~~~p~ 294 (343)
T 2qe8_A 228 SNLQLTDAELGSKIERYSEKPICDGISIDK--DHNIYVGDLAHS--------AIGVITSADRAYKLLVTDEK---LSWTD 294 (343)
T ss_dssp TCTTCCHHHHHTTCEEEEECCSCSCEEECT--TCCEEEEEGGGT--------EEEEEETTTTEEEEEEECGG---GSCEE
T ss_pred cCCCCChhhhhcceEecccCCCCceEEECC--CCCEEEEccCCC--------eEEEEECCCCCEEEEEECCc---eecCC
Confidence 11111111 11234799999999 999999998874 8999999 899777776652 23455
Q ss_pred EEEe
Q 048181 302 EVQP 305 (310)
Q Consensus 302 ~~~~ 305 (310)
.++-
T Consensus 295 ~va~ 298 (343)
T 2qe8_A 295 SFNF 298 (343)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 5543
No 18
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.90 E-value=2.8e-21 Score=174.94 Aligned_cols=220 Identities=20% Similarity=0.275 Sum_probs=166.9
Q ss_pred CCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 29 FPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 29 ~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
+++....|++++|+++|++|+++..+++|++++++++ ...+.. .....|.+++++ ++|+
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-------------------~~~~~~~~i~~~-~dg~ 99 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-------------------SHKANPAAIKIH-KDGR 99 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-------------------CSSSSEEEEEEC-TTSC
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee-------------------CCCCCcceEEEC-CCCc
Confidence 3445678999999999998889998999999998754 333210 123468999997 7899
Q ss_pred EEEEeCCC-----cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 108 LYIADAYS-----GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 108 LyVad~~~-----gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
|||++... +|+++|+++++.+.+.... .....|+++++++ +|++|+++.... .....+.|+
T Consensus 100 l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~i~~d~-~g~l~v~~~~~~-----------~~~~~~~l~ 165 (333)
T 2dg1_A 100 LFVCYLGDFKSTGGIFAATENGDNLQDIIEDL--STAYCIDDMVFDS-KGGFYFTDFRGY-----------STNPLGGVY 165 (333)
T ss_dssp EEEEECTTSSSCCEEEEECTTSCSCEEEECSS--SSCCCEEEEEECT-TSCEEEEECCCB-----------TTBCCEEEE
T ss_pred EEEEeCCCCCCCceEEEEeCCCCEEEEEEccC--ccCCcccceEECC-CCCEEEEecccc-----------ccCCCceEE
Confidence 99998654 6999999887765333211 1235789999999 599999986421 012357899
Q ss_pred EEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce-----ee-ecCC--CCCceeeeCCCC
Q 048181 183 SYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF-----DI-INFQ--AKPHNIKRNPGL 254 (310)
Q Consensus 183 ~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~-----~~-~~l~--g~Pdgl~~d~~~ 254 (310)
++|+++++++.+...+..|++|++++||+.||++++..++|++|+++... ... .. ..++ ..|++|++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~~~~~~~i~~d~-- 242 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGHEGPDSCCIDS-- 242 (333)
T ss_dssp EECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSSSEEEEEEEBT--
T ss_pred EEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC-cCcccccceEEEecCCCCCCCceEECC--
Confidence 99998777777666677899999999999999999999999999985311 111 11 2222 3799999999
Q ss_pred CCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCC
Q 048181 255 LQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEA 293 (310)
Q Consensus 255 dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~ 293 (310)
+|++|++..... .+.++|++|+.+..+..|.
T Consensus 243 ~G~l~v~~~~~~--------~v~~~d~~g~~~~~~~~~~ 273 (333)
T 2dg1_A 243 DDNLYVAMYGQG--------RVLVFNKRGYPIGQILIPG 273 (333)
T ss_dssp TCCEEEEEETTT--------EEEEECTTSCEEEEEECTT
T ss_pred CCCEEEEEcCCC--------EEEEECCCCCEEEEEEcCC
Confidence 999999987652 7999999999999998774
No 19
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.90 E-value=1.3e-21 Score=193.37 Aligned_cols=205 Identities=16% Similarity=0.166 Sum_probs=153.0
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
++..|.+|++++ ++.+||+|..+++|+|++.++.. +.+. ......|.|||+|..+++|
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~-------------------~~~~~~P~GlAvD~~~~~l 98 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-------------------VSGLLSPDGLACDWLGEKL 98 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE-------------------CSSCSCEEEEEEETTTTEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE-------------------eCCCCCcCeEEEEecCCEE
Confidence 467899999997 57899999999999999998752 2221 1234589999999658999
Q ss_pred EEEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 109 YIADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 109 yVad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
|++|...+ |.++++++...+.+.. ..+..|++|++||.+|.|||||.+. .++|++.+++
T Consensus 99 y~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g~----------------~~~I~r~~~d 158 (619)
T 3s94_A 99 YWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWGE----------------VPKIERAGMD 158 (619)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCCEEEETTTTEEEEEECSS----------------SCEEEEEETT
T ss_pred EEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCceEEEecCCCeEEEeccCC----------------CCEEEEEECC
Confidence 99998754 8899998765555542 2467899999999779999999753 3689999887
Q ss_pred CCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-e-cCCCCCceeeeCCCCCCcEEEEEec
Q 048181 188 SSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I-NFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 188 ~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~-~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
....+.+. ..+..||||+++++++.||++|+..++|++++++|.. ...+ . .+ ..|.||++++ + +||++++.
T Consensus 159 G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~--~~~~~~~~~-~~P~gi~~~~--~-~ly~td~~ 232 (619)
T 3s94_A 159 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN--RQAVVKGSL-PHPFALTLFE--D-ILYWTDWS 232 (619)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE--EC----------CCCEEESS--S-EEEEECTT
T ss_pred CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc--cEEEEeCCC-CCceEEEEeC--C-EEEEecCC
Confidence 44444444 5788999999999888999999999999999998742 1122 2 33 4699999998 6 99999988
Q ss_pred CCCCCCCCceeeEEECC-CCcEEEEE
Q 048181 265 TRQPAGTPVPIGQRISA-FGAVLDTI 289 (310)
Q Consensus 265 ~~~~~~~~~~~v~~~~~-~G~~~~~~ 289 (310)
.. .|.++|. .|+....+
T Consensus 233 ~~--------~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 233 TH--------SILACNKYTGEGLREI 250 (619)
T ss_dssp TC--------SEEEEESSSCCCCEEC
T ss_pred CC--------EEEEEECCCCcccEEE
Confidence 74 6788886 46554443
No 20
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=1.1e-20 Score=167.52 Aligned_cols=216 Identities=11% Similarity=0.146 Sum_probs=159.2
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEE-eeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTD-FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
++.+..|.+++++++|++|+++..+++|.+++++++... +... +. .......|.+++++..+|+|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~----------~~----~~~~~~~p~~i~~~~~~g~l 91 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGEC----------GK----RDSQLLYPNRVAVVRNSGDI 91 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCB----------SS----STTCBSSEEEEEEETTTTEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEeccc----------CC----CcccccCceEEEEEcCCCeE
Confidence 456889999999999999999999999999998866432 2110 00 01234579999995478999
Q ss_pred EEEeC--CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 109 YIADA--YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 109 yVad~--~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
||++. ...|.+++.++.....+. ...+..|+++++++ +|++|+++... ++|+++|+
T Consensus 92 ~v~~~~~~~~i~~~d~~g~~~~~~~----~~~~~~~~~i~~~~-~g~l~v~~~~~-----------------~~i~~~~~ 149 (286)
T 1q7f_A 92 IVTERSPTHQIQIYNQYGQFVRKFG----ATILQHPRGVTVDN-KGRIIVVECKV-----------------MRVIIFDQ 149 (286)
T ss_dssp EEEECGGGCEEEEECTTSCEEEEEC----TTTCSCEEEEEECT-TSCEEEEETTT-----------------TEEEEECT
T ss_pred EEEcCCCCCEEEEECCCCcEEEEec----CccCCCceEEEEeC-CCCEEEEECCC-----------------CEEEEEcC
Confidence 99986 456999997664444332 12456799999999 59999998643 67999997
Q ss_pred CCCeEEEee--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEE
Q 048181 187 RSSQVTVLL--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 187 ~~g~~~~~~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
+...+..+. ..+..|++|+++++|+ ||+++...++|++|+.++.. ...+ .+....|.+|++|+ +|+||++.
T Consensus 150 ~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~--~~~~~~~g~~~~p~~i~~d~--~G~l~v~~ 224 (286)
T 1q7f_A 150 NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQY--LRQIGGEGITNYPIGVGINS--NGEILIAD 224 (286)
T ss_dssp TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCCE--EEEESCTTTSCSEEEEEECT--TCCEEEEE
T ss_pred CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCCE--EEEEccCCccCCCcEEEECC--CCCEEEEe
Confidence 643333332 3566899999999986 99999999999999976421 1112 11124699999999 99999999
Q ss_pred ecCCCCCCCCceeeEEECCCCcEEEEEecCC
Q 048181 263 IITRQPAGTPVPIGQRISAFGAVLDTISFEA 293 (310)
Q Consensus 263 ~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~ 293 (310)
.... ..+.+++++|+.+..+....
T Consensus 225 ~~~~-------~~i~~~~~~g~~~~~~~~~~ 248 (286)
T 1q7f_A 225 NHNN-------FNLTIFTQDGQLISALESKV 248 (286)
T ss_dssp CSSS-------CEEEEECTTSCEEEEEEESS
T ss_pred CCCC-------EEEEEECCCCCEEEEEcccC
Confidence 7651 26889999999888887653
No 21
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=4.4e-21 Score=181.76 Aligned_cols=206 Identities=10% Similarity=0.098 Sum_probs=154.6
Q ss_pred CCCCCCcceEEEcc--CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC
Q 048181 30 PPKAFGGESIAFEP--VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 30 ~~~~~~Pegia~d~--~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g 106 (310)
.++|..|.+|++|| +|+||++|.. ++|++++++++. ..+. .....|.+|+++ .+|
T Consensus 133 ~~~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~--------------------~~~~~P~~ia~d-~~G 190 (430)
T 3tc9_A 133 CGGFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVY--------------------SGLSKVRTICWT-HEA 190 (430)
T ss_dssp CBCCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEE--------------------CCCSCEEEEEEC-TTS
T ss_pred ccCCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEe--------------------cCCCCcceEEEe-CCC
Confidence 34688999999996 4888888876 999999998754 3332 245689999998 566
Q ss_pred e-EEEEeCCC-----cEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 107 Q-LYIADAYS-----GLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 107 ~-LyVad~~~-----gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
+ |||+|... .++.++.++... ..+. .+.+|+++++++++|+|||+|...
T Consensus 191 ~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~~----------------- 247 (430)
T 3tc9_A 191 DSMIITNDQNNNDRPNNYILTRESGFKVITELT------KGQNCNGAETHPINGELYFNSWNA----------------- 247 (430)
T ss_dssp SEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETTT-----------------
T ss_pred CEEEEEeCCCCcccceEEEEeCCCceeeeeeec------cCCCceEEEEeCCCCEEEEEECCC-----------------
Confidence 5 99999742 367777665432 2221 367899999999559999999753
Q ss_pred ceEEEEcCCCCeEEEee--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce---ee-ecC-----------
Q 048181 179 GRLLSYNPRSSQVTVLL--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF---DI-INF----------- 241 (310)
Q Consensus 179 G~l~~~d~~~g~~~~~~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~---~~-~~l----------- 241 (310)
++|++++++++....+. .....|+||+++|+|++|||++..+++|+++++++.. +.. .. .+.
T Consensus 248 ~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~-~~~~~~~~~ag~~g~~g~~dg~~ 326 (430)
T 3tc9_A 248 GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKT-KRLTTPYIVCGQQGAKDWVDGVG 326 (430)
T ss_dssp TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEECCCEEEEECTTCBCCBCEEG
T ss_pred CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccc-ccccceEEEeccCCCCCCCCCCC
Confidence 78999999877653332 2346799999999999999999999999999988631 111 11 110
Q ss_pred ----CCCCc-eeee--------CCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEec
Q 048181 242 ----QAKPH-NIKR--------NPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISF 291 (310)
Q Consensus 242 ----~g~Pd-gl~~--------d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~ 291 (310)
...|. |+++ |+ +|+||+++.... +|.+++++|++......
T Consensus 327 ~~a~~~~P~~gv~v~~~~y~~~D~--~g~lyvaD~~n~--------~I~~i~~~G~v~~~~g~ 379 (430)
T 3tc9_A 327 KKARMHAPRQGTFVKNPAYKGSSD--EYDFYFCDRENH--------CIRILTPQGRVTTFAGR 379 (430)
T ss_dssp GGCBBSSEEEEEEEECGGGTTSSC--CEEEEEEEGGGT--------EEEEECTTSEEEEEEEC
T ss_pred cceEeCCCcceEEEccccccccCC--CCeEEEEECCCc--------EEEEECCCCcEEEEEeC
Confidence 12587 8988 56 799999999874 89999999988877764
No 22
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.88 E-value=1.7e-20 Score=189.40 Aligned_cols=206 Identities=15% Similarity=0.165 Sum_probs=157.8
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCc-----eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDG-----FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
.+..|.+|++|. ++.|||+|..+++|++++.++. .+.+. ......|.|||+|...
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-------------------~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------------SRDIQAPDGLAVDWIH 482 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-------------------CSSCSCCCEEEEETTT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-------------------ecCCCCcceeeeeecC
Confidence 467899999997 5789999999999999998863 11211 1245689999999667
Q ss_pred CeEEEEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 106 RQLYIADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 106 g~LyVad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++||++|...+ |.++++++...+++.. ..+..|++||+|+..|+|||||.+. .++|+++
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~----~~l~~P~gIaVDp~~g~LYwtD~g~----------------~~~I~~~ 542 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKG 542 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEE----CTTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEe----CCCCCcceEEEecCCCCEEEecCCC----------------CCeEEEE
Confidence 79999998754 9999998876655543 2456799999999779999999753 2579999
Q ss_pred cCCCCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-e---cCCCCCceeeeCCCCCCcEE
Q 048181 185 NPRSSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I---NFQAKPHNIKRNPGLLQTFW 259 (310)
Q Consensus 185 d~~~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~---~l~g~Pdgl~~d~~~dG~l~ 259 (310)
+.+....+++. ..+..|+||+++++++.||++|...++|++++++|.. ...+ . .++ .|.+|+++. ++||
T Consensus 543 ~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~--~~~v~~~~~~l~-~P~glav~~---~~lY 616 (791)
T 3m0c_C 543 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKTILEDEKRLA-HPFSLAVFE---DKVF 616 (791)
T ss_dssp ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEEECTTTTS-SEEEEEEET---TEEE
T ss_pred ecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc--eEEEecCCCccC-CCCEEEEeC---CEEE
Confidence 88754444444 5788999999998888999999999999999998752 2222 2 233 688999976 6999
Q ss_pred EEEecCCCCCCCCceeeEEEC-CCCcEEEEEe
Q 048181 260 EAAIITRQPAGTPVPIGQRIS-AFGAVLDTIS 290 (310)
Q Consensus 260 va~~~~~~~~~~~~~~v~~~~-~~G~~~~~~~ 290 (310)
++++... .|.++| .+|+.+..+.
T Consensus 617 wtD~~~~--------~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 617 WTDIINE--------AIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEETTTT--------EEEEEETTTCCCCEEEE
T ss_pred EEECCCC--------EEEEEeCCCCcceEEee
Confidence 9998874 788888 4787666664
No 23
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.88 E-value=3.4e-22 Score=200.17 Aligned_cols=214 Identities=14% Similarity=0.110 Sum_probs=157.3
Q ss_pred CCCCcceEEEccC-CCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 32 KAFGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 32 ~~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
.+..|++|+|+++ +.|||+|..+++|++++.++...... ...........|.||++|..+++||+
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~--------------~~~~i~~~~~~P~glavD~~~g~LY~ 469 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--------------YDTVISRDIQAPDGLAVDWIHSNIYW 469 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC--------------CCCBCCSCC--CCCEECCCSSSBCEE
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc--------------eEEEEeCCCCCcceEEEEeeCCcEEE
Confidence 4678999999974 68999999999999999875210000 00001123457999999866889999
Q ss_pred EeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 111 ADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 111 ad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
+|... .|.++++++...+.+.. ..+..|+++++|+.+|.||+||... .++|++++.+..
T Consensus 470 tD~~~~~I~v~d~dg~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~~----------------~~~I~~~~~dG~ 529 (699)
T 1n7d_A 470 TDSVLGTVSVADTKGVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGV 529 (699)
T ss_dssp CCTTTSCEEEEBSSSCCEEEECC----CSSCCCCCEECCSSSSCCEECCCSS----------------SCCEEBCCSSSC
T ss_pred EeccCCeEEEEecCCCceEEEEe----CCCCCcceEEEccCCCcEEEcccCC----------------CCeEEEEeCCCC
Confidence 99764 59999998766555532 2356799999999779999999642 267888887643
Q ss_pred eEEEe-ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-e--cCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 190 QVTVL-LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I--NFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 190 ~~~~~-~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~--~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
..+++ ...+..||||+++++++.||++|+..++|++++++|.. ...+ . .....|+||++++ + .||++++..
T Consensus 530 ~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~--~~~~~~~~~~~~~P~glavd~--~-~lywtd~~~ 604 (699)
T 1n7d_A 530 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKTILEDEKRLAHPFSLAVFE--D-KVFWTDIIN 604 (699)
T ss_dssp CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC--CEEECCCSSSCSSCCCCEEET--T-EEEEECSTT
T ss_pred CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc--eEEEEecCCcCCCceEeEEEC--C-EEEEEeCCC
Confidence 33333 35688999999999988899999999999999998632 2222 1 1224799999998 5 788888776
Q ss_pred CCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 266 RQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 266 ~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
. .|.++++ +|+.+..|..+
T Consensus 605 ~--------~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 605 E--------AIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp T--------CEEEEETTTEEEEECCCTT
T ss_pred C--------eEEEEEccCCCceEEeecC
Confidence 3 7999997 69998888664
No 24
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.88 E-value=3e-20 Score=183.51 Aligned_cols=200 Identities=16% Similarity=0.139 Sum_probs=155.4
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
++..|.++++|+ +|.+||+|..+++|+|++++|+ .+.+. ......|.|||+|...++||
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~-------------------~~~~~~p~GlAvD~~~~~lY 407 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV-------------------TAQIAHPDGIAVDWVARNLY 407 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSCCCEEEEETTTTEEE
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE-------------------ECCCCCcCceEEecccCcEE
Confidence 467899999997 5789999999999999999874 33332 12346899999996689999
Q ss_pred EEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++|...+ |.++++++...+.+.. ..+..|+++++||..|.+||||.+. .++|++.+.+.
T Consensus 408 ~tD~~~~~I~v~~~~G~~~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g~----------------~~~I~r~~~dG 467 (619)
T 3s94_A 408 WTDTGTDRIEVTRLNGTMRKILIS----EDLEEPRAIVLDPMVGYMYWTDWGE----------------IPKIERAALDG 467 (619)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC----TTCCSEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTS
T ss_pred EEeCCCCcEEEEeCCCCeEEEEEE----CCCCCeeeEEEEcCCCcEEEecCCC----------------CCEEEEEccCC
Confidence 9998754 8888888765555542 2578899999999669999999753 36788988764
Q ss_pred CeEEEe-ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 189 SQVTVL-LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 189 g~~~~~-~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
...+.+ ...+..||||++|++++.||++|+..++|++++++|.. ...+ .++ ..|.||+++. + +||++++..
T Consensus 468 ~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~--~~~~~~~~l-~~P~glav~~--~-~ly~tD~~~ 541 (619)
T 3s94_A 468 SDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG--RRVLVEDKI-PHIFGFTLLG--D-YVYWTDWQR 541 (619)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--CEEEEECCC-CSSCCEEEET--T-EEEEECTTS
T ss_pred CccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc--eEEEeccCC-CCcEEEEEEC--C-EEEEeecCC
Confidence 334444 34689999999999888999999999999999998752 2223 334 4699999997 4 999999987
Q ss_pred CCCCCCCceeeEEECC-CCc
Q 048181 266 RQPAGTPVPIGQRISA-FGA 284 (310)
Q Consensus 266 ~~~~~~~~~~v~~~~~-~G~ 284 (310)
+ .|.+++. +|+
T Consensus 542 ~--------~I~~~~k~~g~ 553 (619)
T 3s94_A 542 R--------SIERVHKRSAE 553 (619)
T ss_dssp S--------CEEEEESSSCC
T ss_pred C--------eEEEEEcCCCc
Confidence 4 6888875 453
No 25
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.88 E-value=2.3e-20 Score=175.63 Aligned_cols=208 Identities=14% Similarity=0.036 Sum_probs=152.9
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 32 KAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
+|..|.+|++|++|+||++|..+++|++++++++. ..+.. ....|. +++++..+.||+
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--------------------~~~~~~-ia~~~~g~~l~~ 187 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--------------------GFKGGK-PAVTKDKQRVYS 187 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--------------------TCCBCB-CEECTTSSEEEE
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--------------------cCCCCc-eeEecCCCcEEE
Confidence 57899999999999999999999999999998654 33321 123566 899855557899
Q ss_pred EeCCC--cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 111 ADAYS--GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 111 ad~~~--gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++... .|++++++++................|+++++++++|+||++|. +++|+++|+++
T Consensus 188 ~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~ 249 (409)
T 3hrp_A 188 IGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKT 249 (409)
T ss_dssp EBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTT
T ss_pred EecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCC
Confidence 98754 69999987654322221111224578999999996699999774 36899999987
Q ss_pred CeEEEe----ecCCCC--Cc-eeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecC---------------CCCCc
Q 048181 189 SQVTVL----LRNLTG--PA-GVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINF---------------QAKPH 246 (310)
Q Consensus 189 g~~~~~----~~~l~~--pn-GIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l---------------~g~Pd 246 (310)
+..+.+ ..+... |. +|+++|+++.||+++..+++|++++.++. ...+.+- ...|.
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 766554 222222 44 99999976789999999999999988753 1111110 13599
Q ss_pred eeeeCCCCCCcEEEEEe-cCCCCCCCCceeeEEEC-CCCcEEEEEec
Q 048181 247 NIKRNPGLLQTFWEAAI-ITRQPAGTPVPIGQRIS-AFGAVLDTISF 291 (310)
Q Consensus 247 gl~~d~~~dG~l~va~~-~~~~~~~~~~~~v~~~~-~~G~~~~~~~~ 291 (310)
||++|+ +|+||+++. ... +|.+++ ++|++......
T Consensus 327 gia~d~--dG~lyvad~~~~~--------~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 327 GMTVDE--DGNFYIVDGFKGY--------CLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp EEEECT--TCCEEEEETTTTC--------EEEEEETTTTEEEEEEEC
T ss_pred EEEEeC--CCCEEEEeCCCCC--------EEEEEECCCCEEEEEeCC
Confidence 999999 999999998 663 899999 88987766654
No 26
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.88 E-value=1.7e-20 Score=164.34 Aligned_cols=199 Identities=20% Similarity=0.281 Sum_probs=145.3
Q ss_pred CcceEEEccCCCEEE-EEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 35 GGESIAFEPVGGAFY-TGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~-~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
.|++++++++|++|+ ++..+++|+++++++...... .......|.+|+++ ++|+|||++.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~------------------~~~~~~~p~~i~~~-~~g~l~v~~~ 85 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL------------------PFNGLYQPQGLAVD-GAGTVYVTDF 85 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC------------------CCCSCCSCCCEEEC-TTCCEEEEET
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE------------------eeCCcCCcceeEEC-CCCCEEEEcC
Confidence 999999999999888 667889999998875432211 01223578999998 6889999998
Q ss_pred CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 114 YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
..+|++++++++....+. ...+..|+++++++ +|++|+++... ++|++++..+.....
T Consensus 86 ~~~i~~~d~~~~~~~~~~----~~~~~~p~~i~~~~-~g~l~v~~~~~-----------------~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQTVLP----FDGLNYPEGLAVDT-QGAVYVADRGN-----------------NRVVKLAAGSKTQTV 143 (270)
T ss_dssp TTEEEEECTTCSCCEECC----CCSCSSEEEEEECT-TCCEEEEEGGG-----------------TEEEEECTTCCSCEE
T ss_pred CCEEEEEeCCCceEeeee----cCCcCCCcceEECC-CCCEEEEECCC-----------------CEEEEEECCCceeEe
Confidence 556999999876554332 12346789999999 59999998642 678888865443332
Q ss_pred e-ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCC
Q 048181 194 L-LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAG 270 (310)
Q Consensus 194 ~-~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~ 270 (310)
. ...+..|++|+++++|+ ||+++..+++|++|+.++.. .... ..+ ..|.+|++|+ +|+||++....+
T Consensus 144 ~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~-~~p~~i~~d~--~g~l~v~~~~~~---- 213 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNN--QVVLPFTDI-TAPWGIAVDE--AGTVYVTEHNTN---- 213 (270)
T ss_dssp CCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCC--EEECCCSSC-CSEEEEEECT--TCCEEEEETTTS----
T ss_pred eccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCc--eEeecccCC-CCceEEEECC--CCCEEEEECCCC----
Confidence 2 23456899999999997 99999999999999876531 1111 222 4699999999 999999997653
Q ss_pred CCceeeEEECCCCcEEEE
Q 048181 271 TPVPIGQRISAFGAVLDT 288 (310)
Q Consensus 271 ~~~~~v~~~~~~G~~~~~ 288 (310)
.+.+++++|+....
T Consensus 214 ----~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 214 ----QVVKLLAGSTTSTV 227 (270)
T ss_dssp ----CEEEECTTCSCCEE
T ss_pred ----cEEEEcCCCCccee
Confidence 67888887765544
No 27
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.88 E-value=2e-19 Score=159.22 Aligned_cols=231 Identities=13% Similarity=0.136 Sum_probs=168.2
Q ss_pred eeeecceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCcee
Q 048181 18 VFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTF 97 (310)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~ 97 (310)
.|.+..++++++|.....|+++++|++|++|+++..+++|.++++++....+.. ......|.
T Consensus 4 ~w~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~------------------~~~~~~~~ 65 (300)
T 2qc5_A 4 AWMNFYLEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEV------------------PTPDAKVM 65 (300)
T ss_dssp GGGSEEEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEC------------------SSTTCCEE
T ss_pred cceeeeEEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEEC------------------CCCCCcce
Confidence 355667888999988889999999999998888888899999998855544321 12245799
Q ss_pred eEEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecC
Q 048181 98 GLALHYATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITND 176 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~ 176 (310)
+|+++ ++|++|+++.. .+|+++|++ ++...+.... ....|+++++++ +|++|+++...
T Consensus 66 ~i~~~-~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~-~g~l~v~~~~~--------------- 124 (300)
T 2qc5_A 66 CLIVS-SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGL-NGDIWFTQLNG--------------- 124 (300)
T ss_dssp EEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEECS-TTCEEEEETTT---------------
T ss_pred eEEEC-CCCCEEEEecCCCeEEEECCC-CCeEEecCCC---CCCCCccceECC-CCCEEEEccCC---------------
Confidence 99998 78999999875 459999988 5554442211 235789999999 59999998642
Q ss_pred CCceEEEEcCCCCeEEEee--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCC
Q 048181 177 STGRLLSYNPRSSQVTVLL--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGL 254 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~ 254 (310)
+.|+++|++ ++..... .....|++|+++++|+ ||+++...++|++|+.++.. .......-...|.+|++|+
T Consensus 125 --~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g~~-~~~~~~~~~~~~~~i~~d~-- 197 (300)
T 2qc5_A 125 --DRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTGKL-EEYPLPTNAAAPVGITSGN-- 197 (300)
T ss_dssp --TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTCCE-EEEECSSTTCCEEEEEECT--
T ss_pred --CeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCCcE-EEeeCCCCCCCcceEEECC--
Confidence 579999987 6665432 2456899999999998 99999999999999874321 1111111124699999999
Q ss_pred CCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEEe
Q 048181 255 LQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQP 305 (310)
Q Consensus 255 dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~ 305 (310)
+|+||++..... .+.+++++|++.. +..+.+. ..+..++.
T Consensus 198 ~g~l~v~~~~~~--------~i~~~~~~g~~~~-~~~~~~~--~~~~~i~~ 237 (300)
T 2qc5_A 198 DGALWFVEIMGN--------KIGRITTTGEISE-YDIPTPN--ARPHAITA 237 (300)
T ss_dssp TSSEEEEETTTT--------EEEEECTTCCEEE-EECSSTT--CCEEEEEE
T ss_pred CCCEEEEccCCC--------EEEEEcCCCcEEE-EECCCCC--CCceEEEE
Confidence 999999987652 6888888887655 3344322 24455544
No 28
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=5e-20 Score=167.64 Aligned_cols=163 Identities=14% Similarity=0.217 Sum_probs=120.8
Q ss_pred CCCCCcceEEEccCCCEEEEEeCC------------------------CeEEEEECC-CceEEeeeecCCCCccccCCCc
Q 048181 31 PKAFGGESIAFEPVGGAFYTGVAD------------------------GRILKYQAP-DGFTDFAFTTPTRSKAVCDGTT 85 (310)
Q Consensus 31 ~~~~~Pegia~d~~G~l~~~d~~~------------------------g~I~r~~~~-g~~~~~~~~~~~~~~~~~~g~~ 85 (310)
.++..|.+++++++|++|+++..+ ++|++++++ ++..... +
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~------------~-- 86 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS------------G-- 86 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE------------C--
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc------------C--
Confidence 467789999999999999888776 468899886 4443211 0
Q ss_pred cccCCCCCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCCC--eEEEeeccC----CCccccCccceEEeCCCCeEEEEc
Q 048181 86 NLDLGPICRRTFGLALHYATRQLYIADAYS-GLLVVGPNGR--LATQLATGA----EGQAFHFLDGLDVDQGTGVVYFTD 158 (310)
Q Consensus 86 ~~~~~~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~~--~~~~~~~~~----~g~~~~~pndvavd~~~G~lyvtd 158 (310)
......|.||+++ ++|+|||+|... .|+++++++. .+..+.... ....+..|+++++++++|++||+|
T Consensus 87 ----~~~~~~p~gia~d-~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d 161 (329)
T 3fvz_A 87 ----KNLFYLPHGLSID-TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD 161 (329)
T ss_dssp ----TTTCSSEEEEEEC-TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE
T ss_pred ----CCccCCceEEEEC-CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe
Confidence 1234689999998 789999999865 4999998875 344443211 123577899999999459999999
Q ss_pred CCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee-----------cCCCCCceeEEccCCCEEEEEecCCCeEEEEE
Q 048181 159 ASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL-----------RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYW 227 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~-----------~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~ 227 (310)
+.. +++|.++|++ ++..... ..+..|+||+++++++.|||++..+++|.+|+
T Consensus 162 ~~~----------------~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 162 GYC----------------NSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp CSS----------------CCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCC----------------CCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 621 2578888865 4433322 23567999999999667999999999999999
Q ss_pred ec
Q 048181 228 LR 229 (310)
Q Consensus 228 ~~ 229 (310)
.+
T Consensus 225 ~~ 226 (329)
T 3fvz_A 225 TD 226 (329)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 29
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=9.9e-19 Score=154.67 Aligned_cols=213 Identities=13% Similarity=0.205 Sum_probs=159.0
Q ss_pred ceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
.++.+.++..+..|.+++++++|++|+++..+++|++++++++...+.. ......|.+++++
T Consensus 51 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~------------------~~~~~~~~~i~~~ 112 (300)
T 2qc5_A 51 RIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPL------------------PQPDSGPYGITEG 112 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEC------------------SSTTCCEEEEEEC
T ss_pred ceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecC------------------CCCCCCCccceEC
Confidence 4455666766678999999999998888887899999998865544321 1123579999998
Q ss_pred cCCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 103 YATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 103 ~~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
++|+||+++.. .+|++++++ ++...+.. . .....|+++++++ +|++|+++... +.|
T Consensus 113 -~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--~-~~~~~~~~i~~d~-~g~l~v~~~~~-----------------~~i 169 (300)
T 2qc5_A 113 -LNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--P-NKGSYPAFITLGS-DNALWFTENQN-----------------NSI 169 (300)
T ss_dssp -STTCEEEEETTTTEEEEECTT-SCEEEEEC--S-STTCCEEEEEECT-TSSEEEEETTT-----------------TEE
T ss_pred -CCCCEEEEccCCCeEEEECCC-CCEEEccC--C-CCCCCceeEEECC-CCCEEEEecCC-----------------CeE
Confidence 78999999874 469999998 55544321 1 1346789999999 59999998642 579
Q ss_pred EEEcCCCCeEEEee--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---ecCCCCCceeeeCCCCCC
Q 048181 182 LSYNPRSSQVTVLL--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---INFQAKPHNIKRNPGLLQ 256 (310)
Q Consensus 182 ~~~d~~~g~~~~~~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~~l~g~Pdgl~~d~~~dG 256 (310)
+++|+ +++..... .....|.+|+++++|+ ||+++...++|++|+.++ .... ..-...|.+|++|+ +|
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~--~g 241 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTTG----EISEYDIPTPNARPHAITAGK--NS 241 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECS--TT
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCCC----cEEEEECCCCCCCceEEEECC--CC
Confidence 99998 46655432 3456899999999986 999999999999998743 2221 11124699999999 99
Q ss_pred cEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCC
Q 048181 257 TFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEA 293 (310)
Q Consensus 257 ~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~ 293 (310)
+||++.... ..+.+++++|++. .+..+.
T Consensus 242 ~l~v~~~~~--------~~i~~~~~~g~~~-~~~~~~ 269 (300)
T 2qc5_A 242 EIWFTEWGA--------NQIGRITNDNTIQ-EYQLQT 269 (300)
T ss_dssp CEEEEETTT--------TEEEEECTTSCEE-EEECCS
T ss_pred CEEEeccCC--------CeEEEECCCCcEE-EEECCc
Confidence 999999764 2799999998765 455553
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=1.6e-18 Score=153.25 Aligned_cols=225 Identities=12% Similarity=0.188 Sum_probs=162.5
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY 103 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~ 103 (310)
+..+.++.....|.+++++++|++|+++..+++|++++++++...+.. ......|.+|+++
T Consensus 47 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~------------------~~~~~~~~~i~~~- 107 (299)
T 2z2n_A 47 ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTL------------------PNPDSAPYGITEG- 107 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEC------------------SSTTCCEEEEEEC-
T ss_pred eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeC------------------CCcCCCceeeEEC-
Confidence 445555544568999999999998888877899999998866544431 0134579999998
Q ss_pred CCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 104 ATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 104 ~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
++|+||+++.. .+|+++++ +++...+... .....|+++++++ +|++|+++.. .+.|+
T Consensus 108 ~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~---~~~~~~~~i~~~~-~g~l~v~~~~-----------------~~~i~ 165 (299)
T 2z2n_A 108 PNGDIWFTEMNGNRIGRITD-DGKIREYELP---NKGSYPSFITLGS-DNALWFTENQ-----------------NNAIG 165 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEECS---STTCCEEEEEECT-TSCEEEEETT-----------------TTEEE
T ss_pred CCCCEEEEecCCceEEEECC-CCCEEEecCC---CCCCCCceEEEcC-CCCEEEEeCC-----------------CCEEE
Confidence 78999999865 46999998 4455443221 1345789999999 5999999854 26799
Q ss_pred EEcCCCCeEEEe--ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecC---CCCCceeeeCCCCCCc
Q 048181 183 SYNPRSSQVTVL--LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINF---QAKPHNIKRNPGLLQT 257 (310)
Q Consensus 183 ~~d~~~g~~~~~--~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l---~g~Pdgl~~d~~~dG~ 257 (310)
++|+ +++++.. ......|++|+++++|+ ||+++...++|++|+.++ ......+ ...|.+|++|+ +|+
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~--~g~ 237 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITTSG----EITEFKIPTPNARPHAITAGA--GID 237 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECS--TTC
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECCCC----cEEEEECCCCCCCceeEEECC--CCC
Confidence 9998 6766553 23456799999999987 999999899999998732 2221111 24699999999 999
Q ss_pred EEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEEecCC
Q 048181 258 FWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGG 308 (310)
Q Consensus 258 l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~~~ 308 (310)
+|++.... ..+.+++++|++ ..+..+.+. ..+..++..++
T Consensus 238 l~v~~~~~--------~~i~~~d~~g~~-~~~~~~~~~--~~~~~i~~~~g 277 (299)
T 2z2n_A 238 LWFTEWGA--------NKIGRLTSNNII-EEYPIQIKS--AEPHGICFDGE 277 (299)
T ss_dssp EEEEETTT--------TEEEEEETTTEE-EEEECSSSS--CCEEEEEECSS
T ss_pred EEEeccCC--------ceEEEECCCCce-EEEeCCCCC--CccceEEecCC
Confidence 99998664 279999998864 455566432 34555554333
No 31
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=2.7e-18 Score=151.77 Aligned_cols=223 Identities=12% Similarity=0.179 Sum_probs=162.4
Q ss_pred ceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
+++++++|.....|.++++|++|++|+++..+++|.++++++....+.. ......|.+|+++
T Consensus 4 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~------------------~~~~~~~~~i~~~ 65 (299)
T 2z2n_A 4 KLQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPL------------------PTPDAKVMCLTIS 65 (299)
T ss_dssp EEEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEC------------------SSTTCCEEEEEEC
T ss_pred eEEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecC------------------CcccCceeeEEEC
Confidence 4677888887889999999999998888777899999998854444321 1123579999998
Q ss_pred cCCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 103 YATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 103 ~~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
++|++|+++.. .+|+++++++ +.+.+... .....|+++++++ +|++|+++... +.|
T Consensus 66 -~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~---~~~~~~~~i~~~~-~g~l~v~~~~~-----------------~~i 122 (299)
T 2z2n_A 66 -SDGEVWFTENAANKIGRITKKG-IIKEYTLP---NPDSAPYGITEGP-NGDIWFTEMNG-----------------NRI 122 (299)
T ss_dssp -TTSCEEEEETTTTEEEEECTTS-CEEEEECS---STTCCEEEEEECT-TSCEEEEETTT-----------------TEE
T ss_pred -CCCCEEEeCCCCCeEEEECCCC-cEEEEeCC---CcCCCceeeEECC-CCCEEEEecCC-----------------ceE
Confidence 78999999875 4599999874 44444311 1345789999999 59999998642 679
Q ss_pred EEEcCCCCeEEEee--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---ecCCCCCceeeeCCCCCC
Q 048181 182 LSYNPRSSQVTVLL--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---INFQAKPHNIKRNPGLLQ 256 (310)
Q Consensus 182 ~~~d~~~g~~~~~~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~~l~g~Pdgl~~d~~~dG 256 (310)
+++|+ +++..... .....|++|+++++|+ ||+++...+.|++++.+ +.... ......|.+|++|+ +|
T Consensus 123 ~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~~~--~g 194 (299)
T 2z2n_A 123 GRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITES----GDITEFKIPTPASGPVGITKGN--DD 194 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT----CCEEEEECSSTTCCEEEEEECT--TS
T ss_pred EEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcCC----CcEEEeeCCCCCCcceeEEECC--CC
Confidence 99998 56655432 2456799999999986 99999989999999873 22221 11123689999999 99
Q ss_pred cEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEEe
Q 048181 257 TFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQP 305 (310)
Q Consensus 257 ~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~ 305 (310)
+||++..... .+.+++++|++.. +..+.. ...+..++.
T Consensus 195 ~l~v~~~~~~--------~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~ 232 (299)
T 2z2n_A 195 ALWFVEIIGN--------KIGRITTSGEITE-FKIPTP--NARPHAITA 232 (299)
T ss_dssp SEEEEETTTT--------EEEEECTTCCEEE-EECSST--TCCEEEEEE
T ss_pred CEEEEccCCc--------eEEEECCCCcEEE-EECCCC--CCCceeEEE
Confidence 9999987542 6888888877543 445532 134555544
No 32
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=4.5e-19 Score=169.46 Aligned_cols=211 Identities=11% Similarity=0.116 Sum_probs=153.2
Q ss_pred CCCCCCcceEEEcc--CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEE-----
Q 048181 30 PPKAFGGESIAFEP--VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL----- 101 (310)
Q Consensus 30 ~~~~~~Pegia~d~--~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~----- 101 (310)
.++|..|.+|++|| +++||+++..+++|++++++++. .++...+ .....+|.+|++
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~----------------~~~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN----------------TIPTNRIRSIAFNKKIE 198 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT----------------TSSCSBEEEEEECCCBT
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC----------------ccccCCCcEEEEeeccc
Confidence 34567899999997 37899998888899999988754 4433110 113457999999
Q ss_pred --ecCCC-eEEEEeCCC-------cEEEEeCCC-CeE------EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccC
Q 048181 102 --HYATR-QLYIADAYS-------GLLVVGPNG-RLA------TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYD 164 (310)
Q Consensus 102 --d~~~g-~LyVad~~~-------gi~~id~~~-~~~------~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~ 164 (310)
+ .+| .|||+|... .++.++++. +.. ..+. .+..|+++++++++|.||++|...
T Consensus 199 ~~d-~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~~--- 268 (496)
T 3kya_A 199 GYA-DEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYEK--- 268 (496)
T ss_dssp TTB-CTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETTT---
T ss_pred ccC-CCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECCC---
Confidence 8 455 499998764 277886544 222 1221 356899999999779999999753
Q ss_pred ccceeEeeeecCCCceEEEEcCC-------CCeE------------EEe--ecCCCCCceeEEccCCCEEEEEecCCCeE
Q 048181 165 FRTIVKLNITNDSTGRLLSYNPR-------SSQV------------TVL--LRNLTGPAGVAISVDSSFLLVSEFTGNRT 223 (310)
Q Consensus 165 ~~~~~~~~~~~~~~G~l~~~d~~-------~g~~------------~~~--~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I 223 (310)
++|+++|++ ++.+ +.+ ...-..|.+||++|+|++|||+|+.+++|
T Consensus 269 --------------g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I 334 (496)
T 3kya_A 269 --------------GQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYF 334 (496)
T ss_dssp --------------TEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred --------------CEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEE
Confidence 789999987 5553 121 22345789999999999999999999999
Q ss_pred EEEEecCCCCCce---e-eec---CC------------CCCc-eeeeC-------CCCCCcEEEEEecCCCCCCCCceee
Q 048181 224 LKYWLRGPRANSF---D-IIN---FQ------------AKPH-NIKRN-------PGLLQTFWEAAIITRQPAGTPVPIG 276 (310)
Q Consensus 224 ~~~~~~~~~~g~~---~-~~~---l~------------g~Pd-gl~~d-------~~~dG~l~va~~~~~~~~~~~~~~v 276 (310)
+++++++.. +.. . +++ .. ..|. +++++ . +|+||||+.... +|
T Consensus 335 ~kid~dg~~-~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~--~g~lyVaD~~N~--------rI 403 (496)
T 3kya_A 335 MRSDYDEIK-KEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE--EYDFYFVDRLNF--------CV 403 (496)
T ss_dssp EEEEEETTT-TEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC--CEEEEEEEGGGT--------EE
T ss_pred EEEecCCCc-ceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccC--CCeEEEEECCCC--------EE
Confidence 999988642 211 1 111 11 2588 88887 6 899999999874 89
Q ss_pred EEECCCCcEEEEEec
Q 048181 277 QRISAFGAVLDTISF 291 (310)
Q Consensus 277 ~~~~~~G~~~~~~~~ 291 (310)
.+++++|++......
T Consensus 404 r~i~~~G~v~TiaG~ 418 (496)
T 3kya_A 404 RKVTPEGIVSTYAGR 418 (496)
T ss_dssp EEECTTCBEEEEEES
T ss_pred EEEeCCCCEEEEecc
Confidence 999999987776654
No 33
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.84 E-value=5.4e-19 Score=174.79 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=158.3
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
++..+.++++|+ ++.+||+|..+++|+|+..+|.. +.+... .. ........|.|||+|...++||
T Consensus 338 ~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~-~~------------~~~~~~~~p~glAvD~~~~nLY 404 (628)
T 4a0p_A 338 SLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVS-SV------------PSQNLEIQPYDLSIDIYSRYIY 404 (628)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---------------------CCCEEEEEEETTTTEEE
T ss_pred hcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEc-cc------------ccccccCCcceEEeeccCCeEE
Confidence 466788999997 47899999999999999988653 222210 00 0001356899999996578899
Q ss_pred EEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++|...+ |.+++.++.....+... .+..|++++++|..|.+||||.... .++|++.+++.
T Consensus 405 ~td~~~~~I~v~~~~G~~~~~l~~~----~l~~Pr~iavdp~~g~ly~tD~g~~---------------~~~I~r~~~dG 465 (628)
T 4a0p_A 405 WTCEATNVINVTRLDGRSVGVVLKG----EQDRPRAVVVNPEKGYMYFTNLQER---------------SPKIERAALDG 465 (628)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEEC----TTCCEEEEEEETTTTEEEEEEEETT---------------EEEEEEEETTS
T ss_pred EEcCCCCEEEEEECCCCeEEEEEeC----CCCceeeEEEecCCCeEEEeecCCC---------------CCeEEEEeCCC
Confidence 9998755 77888876544444332 4577999999996699999997531 13799998875
Q ss_pred CeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCC
Q 048181 189 SQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 189 g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
...+.+. ..+..||||++|++++.||++|+..++|.+++++|.. ...+ ..-...|.||+++. |+||++++..+
T Consensus 466 ~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~--r~~~~~~~~~~P~glav~~---~~ly~tD~~~~ 540 (628)
T 4a0p_A 466 TEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN--RIVLEDSNILQPVGLTVFE---NWLYWIDKQQQ 540 (628)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSCEEEEEEET---TEEEEEETTTT
T ss_pred CCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc--eEEEEcCCCCCcEEEEEEC---CEEEEEECCCC
Confidence 4444444 4788999999999988999999999999999998742 2222 22234699999986 79999999874
Q ss_pred CCCCCCceeeEEECCC-CcEEEEEec
Q 048181 267 QPAGTPVPIGQRISAF-GAVLDTISF 291 (310)
Q Consensus 267 ~~~~~~~~~v~~~~~~-G~~~~~~~~ 291 (310)
.|.++|.. |+....+..
T Consensus 541 --------~i~~~~k~~G~~~~~i~~ 558 (628)
T 4a0p_A 541 --------MIEKIDMTGREGRTKVQA 558 (628)
T ss_dssp --------EEEEEETTSSSCCEEEEC
T ss_pred --------eEEEEECcCCCCcEEEec
Confidence 78889975 876655553
No 34
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.84 E-value=2e-18 Score=157.29 Aligned_cols=218 Identities=14% Similarity=0.048 Sum_probs=152.2
Q ss_pred CCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEE--eeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 33 AFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTD--FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
...|++++++++|.+|+++..+++|.++++.+.... +.. +. .......|.+|+++ +++|||
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-----------g~----~~~~~~~p~~i~~~--~~~lyv 145 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-----------PD----MDMESGSTEQMVQY--GKYVYV 145 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-----------TT----CCTTTCBCCCEEEE--TTEEEE
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-----------CC----ccccCCCcceEEEE--CCEEEE
Confidence 468999999888987777767899999998854322 210 00 00122378999994 899999
Q ss_pred EeC--CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 111 ADA--YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 111 ad~--~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++. ...|.++|+++++....... ...|+++++++ +|++|+++....... . .....++|+++|+++
T Consensus 146 ~~~~~~~~v~viD~~t~~~~~~i~~-----g~~p~~i~~~~-dG~l~v~~~~~~~~~-~------~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETDKVVDELTI-----GIQPTSLVMDK-YNKMWTITDGGYEGS-P------YGYEAPSLYRIDAET 212 (328)
T ss_dssp EECTTCCEEEEEETTTTEEEEEEEC-----SSCBCCCEECT-TSEEEEEBCCBCTTC-S------SCBCCCEEEEEETTT
T ss_pred EcCCCCCEEEEEECCCCeEEEEEEc-----CCCccceEEcC-CCCEEEEECCCccCC-c------cccCCceEEEEECCC
Confidence 986 34599999998765433222 13589999999 599999986531000 0 001137899999988
Q ss_pred CeEEEeec--CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecC-CCCCceeeeCCCCCCcEEEEE---
Q 048181 189 SQVTVLLR--NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINF-QAKPHNIKRNPGLLQTFWEAA--- 262 (310)
Q Consensus 189 g~~~~~~~--~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l-~g~Pdgl~~d~~~dG~l~va~--- 262 (310)
+++..... ....|++|+++||+++||+++. .|++++....+.....+... ...|+||++|+. +|+|||+.
T Consensus 213 ~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~-~g~lyva~~~~ 288 (328)
T 3dsm_A 213 FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN-NGEVYVADAID 288 (328)
T ss_dssp TEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT-TCCEEEEECTT
T ss_pred CeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCC-CCeEEEEcccc
Confidence 87764332 1247999999999999999976 89999886432211111111 247999999951 67999998
Q ss_pred -ecCCCCCCCCceeeEEECCCCcEEEEEecC
Q 048181 263 -IITRQPAGTPVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 263 -~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p 292 (310)
... ..|.+||++|+++..+...
T Consensus 289 y~~~--------~~V~v~d~~g~~~~~i~~G 311 (328)
T 3dsm_A 289 YQQQ--------GIVYRYSPQGKLIDEFYVG 311 (328)
T ss_dssp SSSE--------EEEEEECTTCCEEEEEEEE
T ss_pred cccC--------CEEEEECCCCCEEEEEEec
Confidence 433 4799999999999998764
No 35
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.83 E-value=2.4e-18 Score=158.56 Aligned_cols=198 Identities=15% Similarity=0.164 Sum_probs=144.8
Q ss_pred eEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCc-
Q 048181 38 SIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSG- 116 (310)
Q Consensus 38 gia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~g- 116 (310)
..+.++++.|+|+. .+.|+++++++...... .....+|.|+++|+.+++||++|...+
T Consensus 38 C~~~~~~~~ll~~~--~~~I~~i~~~g~~~~~~-------------------~~~~~~~~~l~~d~~~~~ly~~D~~~~~ 96 (349)
T 3v64_C 38 CKALGPEPVLLFAN--RIDIRQVLPHRSEYTLL-------------------LNNLENAIALDFHHRRELVFWSDVTLDR 96 (349)
T ss_dssp EEESSSCCEEEEEC--BSCEEEECTTSCCEEEE-------------------ECSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ccccccCceeEeec--ccceEEEeCCCCeeEEe-------------------ecCCCceEEEEEeccccEEEEEeccCCc
Confidence 34445555555554 45799999987533221 124457999999977899999998654
Q ss_pred EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee-
Q 048181 117 LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL- 195 (310)
Q Consensus 117 i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~- 195 (310)
|++++++++..+.+... .+..|+++++|+.+|+||++|... ++|++++.++...+.+.
T Consensus 97 I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~ly~~d~~~-----------------~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 97 ILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSGT-----------------SRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp EEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETTT-----------------TEEEEEETTSCSCEEEEC
T ss_pred eEEEecCCCCceEEEeC----CCCCccEEEEecCCCeEEEEcCCC-----------------CeEEEEcCCCCceEEEEe
Confidence 99999988665554321 356789999997679999999753 57888888754444443
Q ss_pred cCCCCCceeEEccCCCEEEEEecCC-CeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCC
Q 048181 196 RNLTGPAGVAISVDSSFLLVSEFTG-NRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTP 272 (310)
Q Consensus 196 ~~l~~pnGIa~~~dg~~Lyv~d~~~-~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~ 272 (310)
..+..|+||+++|+++.||++|... ++|+|++++|.. ...+ .++ ..|.||++|.. +|.||+++...+
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~-~~PnGla~d~~-~~~lY~aD~~~~------ 225 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIADTHL-FWPNGLTIDYA-GRRMYWVDAKHH------ 225 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEESCCSSC-SCEEEEEEETT-TTEEEEEETTTT------
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--cEEEEECCC-CCcceEEEeCC-CCEEEEEECCCC------
Confidence 5788999999999888999999998 999999998742 1222 233 36999999941 678999998763
Q ss_pred ceeeEEECCCCcEEEEE
Q 048181 273 VPIGQRISAFGAVLDTI 289 (310)
Q Consensus 273 ~~~v~~~~~~G~~~~~~ 289 (310)
.|.+++.+|.....+
T Consensus 226 --~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 226 --VIERANLDGSHRKAV 240 (349)
T ss_dssp --EEEEEETTSCSCEEE
T ss_pred --EEEEEeCCCCceEEE
Confidence 788888888654443
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.83 E-value=9.7e-19 Score=153.14 Aligned_cols=195 Identities=19% Similarity=0.280 Sum_probs=143.9
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 32 KAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
.+..|.+++++++|++|+++. +++|++++++++..... .......|.+|+++ ++|+|||+
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~------------------~~~~~~~p~~i~~~-~~g~l~v~ 124 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL------------------PFDGLNYPEGLAVD-TQGAVYVA 124 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC------------------CCCSCSSEEEEEEC-TTCCEEEE
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee------------------ecCCcCCCcceEEC-CCCCEEEE
Confidence 456899999999999888877 89999999887543211 01223579999998 68999999
Q ss_pred eCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 112 DAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 112 d~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
+... .|++++..+...... . ...+..|+++++++ +|++|+++... ++|+++|++++.
T Consensus 125 ~~~~~~i~~~~~~~~~~~~~--~--~~~~~~p~~i~~~~-~g~l~v~~~~~-----------------~~i~~~~~~~~~ 182 (270)
T 1rwi_B 125 DRGNNRVVKLAAGSKTQTVL--P--FTGLNDPDGVAVDN-SGNVYVTDTDN-----------------NRVVKLEAESNN 182 (270)
T ss_dssp EGGGTEEEEECTTCCSCEEC--C--CCSCCSCCCEEECT-TCCEEEEEGGG-----------------TEEEEECTTTCC
T ss_pred ECCCCEEEEEECCCceeEee--c--cccCCCceeEEEeC-CCCEEEEECCC-----------------CEEEEEecCCCc
Confidence 8754 588997655433221 1 12356799999999 59999998642 679999987655
Q ss_pred EEEe-ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCC
Q 048181 191 VTVL-LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQ 267 (310)
Q Consensus 191 ~~~~-~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~ 267 (310)
.... ...+..|++|+++++| .||+++...++|++|+.++... ... .++ ..|.+|++++ +|+||+++....
T Consensus 183 ~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~--~~~~~~~~-~~p~~i~~~~--~g~l~v~~~~~~- 255 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS--TVLPFTGL-NTPLAVAVDS--DRTVYVADRGND- 255 (270)
T ss_dssp EEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC--EECCCCSC-SCEEEEEECT--TCCEEEEEGGGT-
T ss_pred eEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc--eeeccCCC-CCceeEEECC--CCCEEEEECCCC-
Confidence 4432 2455789999999999 5999999999999998765311 111 222 3699999999 999999998763
Q ss_pred CCCCCceeeEEECCC
Q 048181 268 PAGTPVPIGQRISAF 282 (310)
Q Consensus 268 ~~~~~~~~v~~~~~~ 282 (310)
+|.+++.+
T Consensus 256 -------~v~~~~~~ 263 (270)
T 1rwi_B 256 -------RVVKLTSL 263 (270)
T ss_dssp -------EEEEECCC
T ss_pred -------EEEEEcCC
Confidence 67777764
No 37
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.82 E-value=1.5e-18 Score=163.21 Aligned_cols=199 Identities=13% Similarity=0.104 Sum_probs=140.0
Q ss_pred CCcceEEEccCCCEEEEEeC-CC-eEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 34 FGGESIAFEPVGGAFYTGVA-DG-RILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~-~g-~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
..|. ++++++|+.+|+... .+ +|++++++++.. .+.. + .......|+++++++.+|+||
T Consensus 172 ~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~---------~-------~~~~~~~p~~iav~p~~g~ly 234 (409)
T 3hrp_A 172 KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ---------L-------GSTFSGKIGAVALDETEEWLY 234 (409)
T ss_dssp CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE---------C-------CTTSCSCCCBCEECTTSSEEE
T ss_pred CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee---------c-------cchhcCCcEEEEEeCCCCeEE
Confidence 4677 999999875555443 33 999999875432 2210 0 011456899999985589999
Q ss_pred EEeCCCcEEEEeCCCCeEEEeecc-CCCccccCcc-ceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 110 IADAYSGLLVVGPNGRLATQLATG-AEGQAFHFLD-GLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 110 Vad~~~gi~~id~~~~~~~~~~~~-~~g~~~~~pn-dvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
+++....|++++++++....+... ..+.....|. ++++++++|+||++|... ++|++++++
T Consensus 235 v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~-----------------~~I~~~~~~ 297 (409)
T 3hrp_A 235 FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL-----------------SSVYKITPD 297 (409)
T ss_dssp EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT-----------------TEEEEECTT
T ss_pred EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC-----------------CEEEEEecC
Confidence 998765699999988765554221 1111112244 999999559999999753 678888876
Q ss_pred CCeEEEeecC---------------CCCCceeEEccCCCEEEEEec-CCCeEEEEEecCCCCCceee-ecC---------
Q 048181 188 SSQVTVLLRN---------------LTGPAGVAISVDSSFLLVSEF-TGNRTLKYWLRGPRANSFDI-INF--------- 241 (310)
Q Consensus 188 ~g~~~~~~~~---------------l~~pnGIa~~~dg~~Lyv~d~-~~~~I~~~~~~~~~~g~~~~-~~l--------- 241 (310)
+++..+... +..|+||+++++|+ |||+|+ .+++|+++++.. |.... .+-
T Consensus 298 -g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~---G~v~~~~g~~~~~g~~~g 372 (409)
T 3hrp_A 298 -GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILD---GYVSTVAGQVDVASQIDG 372 (409)
T ss_dssp -CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTT---TEEEEEEECTTCBSCCCB
T ss_pred -CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCC---CEEEEEeCCCCCCCcCCC
Confidence 445444432 57899999999998 999999 999999999532 33222 111
Q ss_pred ------CCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC
Q 048181 242 ------QAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA 281 (310)
Q Consensus 242 ------~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~ 281 (310)
...|.||++|+ +|+||||+...+ +|.+++.
T Consensus 373 ~~~~~~~~~P~giavd~--~g~lyVad~~n~--------~Ir~i~~ 408 (409)
T 3hrp_A 373 TPLEATFNYPYDICYDG--EGGYWIAEAWGK--------AIRKYAV 408 (409)
T ss_dssp STTTCCBSSEEEEEECS--SSEEEEEESTTC--------EEEEEEE
T ss_pred ChhceEeCCceEEEEcC--CCCEEEEECCCC--------eEEEEEe
Confidence 13699999999 999999999874 6777654
No 38
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.82 E-value=2.6e-18 Score=160.41 Aligned_cols=197 Identities=15% Similarity=0.163 Sum_probs=144.3
Q ss_pred eEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCc-
Q 048181 38 SIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSG- 116 (310)
Q Consensus 38 gia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~g- 116 (310)
..+.++++.++++. .++|++++++++..... ......|.|+++|+.+++||++|...+
T Consensus 81 C~~~~~~~~l~~~~--~~~I~~i~~~~~~~~~~-------------------~~~~~~~~gl~~d~~~~~ly~~D~~~~~ 139 (386)
T 3v65_B 81 CKALGPEPVLLFAN--RIDIRQVLPHRSEYTLL-------------------LNNLENAIALDFHHRRELVFWSDVTLDR 139 (386)
T ss_dssp EEECSSCCEEEEEC--BSCEEEECTTSCCCEEE-------------------ECSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ECCccccceeEeec--CccceeeccCCCcEEEE-------------------ecCCCccEEEEEecCCCeEEEEeCCCCc
Confidence 34444545555543 46899999886532211 134567999999977899999998754
Q ss_pred EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe-e
Q 048181 117 LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL-L 195 (310)
Q Consensus 117 i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~-~ 195 (310)
|++++++++..+.+.. ..+..|+++++|+.+|+||++|... ++|++++.++...+.+ .
T Consensus 140 I~r~~~~g~~~~~~~~----~~~~~p~glavd~~~g~lY~~d~~~-----------------~~I~~~~~dg~~~~~l~~ 198 (386)
T 3v65_B 140 ILRANLNGSNVEEVVS----TGLESPGGLAVDWVHDKLYWTDSGT-----------------SRIEVANLDGAHRKVLLW 198 (386)
T ss_dssp EEEEETTSCCEEEEEC----SSCSCCCCEEEETTTTEEEEEETTT-----------------TEEEECBTTSCSCEEEEC
T ss_pred EEEEecCCCCcEEEEe----CCCCCccEEEEEeCCCeEEEEcCCC-----------------CeEEEEeCCCCceEEeec
Confidence 9999998876555432 2356799999997679999999753 5788888865443443 4
Q ss_pred cCCCCCceeEEccCCCEEEEEecCC-CeEEEEEecCCCCCceee--ecCCCCCceeeeC-CCCCCcEEEEEecCCCCCCC
Q 048181 196 RNLTGPAGVAISVDSSFLLVSEFTG-NRTLKYWLRGPRANSFDI--INFQAKPHNIKRN-PGLLQTFWEAAIITRQPAGT 271 (310)
Q Consensus 196 ~~l~~pnGIa~~~dg~~Lyv~d~~~-~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d-~~~dG~l~va~~~~~~~~~~ 271 (310)
.++..|+||+++|+++.||++|... ++|++++.+|.. ...+ .++ ..|.||++| . +|+||+++...+
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~-~~PnGlavd~~--~~~lY~aD~~~~----- 268 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIADTHL-FWPNGLTIDYA--GRRMYWVDAKHH----- 268 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEECSSC-SCEEEEEEEGG--GTEEEEEETTTT-----
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC--cEEEEECCC-CCeeeEEEeCC--CCEEEEEECCCC-----
Confidence 5788999999999888999999988 999999998742 2222 233 369999999 5 679999998763
Q ss_pred CceeeEEECCCCcEEEEE
Q 048181 272 PVPIGQRISAFGAVLDTI 289 (310)
Q Consensus 272 ~~~~v~~~~~~G~~~~~~ 289 (310)
.|.+++.+|.....+
T Consensus 269 ---~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 269 ---VIERANLDGSHRKAV 283 (386)
T ss_dssp ---EEEEECTTSCSCEEE
T ss_pred ---EEEEEeCCCCeeEEE
Confidence 788888888654444
No 39
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.81 E-value=1.7e-18 Score=156.62 Aligned_cols=218 Identities=13% Similarity=0.054 Sum_probs=144.8
Q ss_pred EEEeCCCCCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEE-
Q 048181 25 TKILFPPKAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL- 101 (310)
Q Consensus 25 ~~~~~~~~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~- 101 (310)
..|++++.-.+||+++||+ +|.+|+.+..+++|.+++++++ .+.+..... . .......+|.||.+
T Consensus 4 ~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~-------s-----~~g~~~~~~sGl~~~ 71 (334)
T 2p9w_A 4 DQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGA-------S-----SNGDGEQQMSGLSLL 71 (334)
T ss_dssp SEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTT-------C-----CSSCCSEEEEEEEES
T ss_pred ceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCc-------c-----ccCCCcceeeEEEEe
Confidence 4677777778999999997 4677777779999999999854 333311000 0 00012236789999
Q ss_pred --ecCCCeEEE-EeC-------------CCcEEEEeCC---CCeEEEeecc--C-C------CccccCccceEEeCCCCe
Q 048181 102 --HYATRQLYI-ADA-------------YSGLLVVGPN---GRLATQLATG--A-E------GQAFHFLDGLDVDQGTGV 153 (310)
Q Consensus 102 --d~~~g~LyV-ad~-------------~~gi~~id~~---~~~~~~~~~~--~-~------g~~~~~pndvavd~~~G~ 153 (310)
| ++|+||| ++. ...|+++|++ +++....+.. . . +.....+||+++|+ +|+
T Consensus 72 ~~D-~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~Gn 149 (334)
T 2p9w_A 72 THD-NSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGN 149 (334)
T ss_dssp SSS-SCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSC
T ss_pred ccC-CCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCC
Confidence 6 5699999 442 2349999988 5554332221 1 1 11345699999999 599
Q ss_pred EEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee------cCCCCCceeEEccCCCEEEEEecCCCeEEEEE
Q 048181 154 VYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL------RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYW 227 (310)
Q Consensus 154 lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~------~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~ 227 (310)
+||||+.. -+.|+|++++...+..+. .....+|||+++|||++|+++++ .++|++|+
T Consensus 150 aYVt~s~~----------------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD 212 (334)
T 2p9w_A 150 SYVAFALG----------------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFD 212 (334)
T ss_dssp EEEEEEES----------------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEE
T ss_pred EEEeCCCC----------------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEc
Confidence 99998632 167999999844454432 12345889999999999999999 99999999
Q ss_pred ecCCCCCceeee--c---CCCCCcee-eeCCCCCCcE-EEEEecCCCCCCCCceeeEEECCCC
Q 048181 228 LRGPRANSFDII--N---FQAKPHNI-KRNPGLLQTF-WEAAIITRQPAGTPVPIGQRISAFG 283 (310)
Q Consensus 228 ~~~~~~g~~~~~--~---l~g~Pdgl-~~d~~~dG~l-~va~~~~~~~~~~~~~~v~~~~~~G 283 (310)
+..+......+. + ....||+| +... +|++ +|+.... ..++..+.||
T Consensus 213 ~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~--~G~vllV~~~~~--------~~~~l~S~Dg 265 (334)
T 2p9w_A 213 VSKPYAWPEPVKINGDFGTLSGTEKIVTVPV--GNESVLVGARAP--------YAISFRSWDN 265 (334)
T ss_dssp CSSSSCCCEECEESSCCCCCTTEEEEEEEEE--TTEEEEEEEETT--------EEEEEECSST
T ss_pred CCCCcceeecccccCCcccccCccccccccc--CCEEEEEEcCCC--------CEEEEECCCC
Confidence 874311111112 2 22359995 7777 8987 8887654 2455666665
No 40
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=5.6e-18 Score=150.03 Aligned_cols=189 Identities=13% Similarity=0.180 Sum_probs=136.5
Q ss_pred CCCCCcceEEE-ccCCCEEEEEeC-CCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 31 PKAFGGESIAF-EPVGGAFYTGVA-DGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 31 ~~~~~Pegia~-d~~G~l~~~d~~-~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
+.+..|.++++ +++|++|+++.. +++|++++++++...... ......|.+|+++ ++|+|
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~------------------~~~~~~~~~i~~~-~~g~l 134 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG------------------ATILQHPRGVTVD-NKGRI 134 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEEC------------------TTTCSCEEEEEEC-TTSCE
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEec------------------CccCCCceEEEEe-CCCCE
Confidence 34568999999 578888888754 899999998776432110 1234579999998 68999
Q ss_pred EEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 109 YIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 109 yVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
||++... .|.++++++.....+... ..+..|+++++++ +|++|++|... ++|+++|++
T Consensus 135 ~v~~~~~~~i~~~~~~g~~~~~~~~~---~~~~~p~~i~~~~-~g~l~v~~~~~-----------------~~i~~~~~~ 193 (286)
T 1q7f_A 135 IVVECKVMRVIIFDQNGNVLHKFGCS---KHLEFPNGVVVND-KQEIFISDNRA-----------------HCVKVFNYE 193 (286)
T ss_dssp EEEETTTTEEEEECTTSCEEEEEECT---TTCSSEEEEEECS-SSEEEEEEGGG-----------------TEEEEEETT
T ss_pred EEEECCCCEEEEEcCCCCEEEEeCCC---CccCCcEEEEECC-CCCEEEEECCC-----------------CEEEEEcCC
Confidence 9998764 599999876544444221 2456799999999 59999998643 678899886
Q ss_pred CCeEEEeec--CCCCCceeEEccCCCEEEEEecCCC-eEEEEEecCCCCCceee-ecCC-CCCceeeeCCCCCCcEEEEE
Q 048181 188 SSQVTVLLR--NLTGPAGVAISVDSSFLLVSEFTGN-RTLKYWLRGPRANSFDI-INFQ-AKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 188 ~g~~~~~~~--~l~~pnGIa~~~dg~~Lyv~d~~~~-~I~~~~~~~~~~g~~~~-~~l~-g~Pdgl~~d~~~dG~l~va~ 262 (310)
...+..+.. .+..|+||+++++|+ |||++..++ +|.+|+.++... ..+ .... ..|.++++++ +|+||++.
T Consensus 194 g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~~~--~~~~~~~~~~~~~~i~~~~--~g~l~vs~ 268 (286)
T 1q7f_A 194 GQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQLI--SALESKVKHAQCFDVALMD--DGSVVLAS 268 (286)
T ss_dssp CCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSCEE--EEEEESSCCSCEEEEEEET--TTEEEEEE
T ss_pred CCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCCEE--EEEcccCCCCcceeEEECC--CCcEEEEC
Confidence 444444332 257899999999996 999999886 999998654211 112 2222 3588999999 99999997
Q ss_pred ec
Q 048181 263 II 264 (310)
Q Consensus 263 ~~ 264 (310)
..
T Consensus 269 ~~ 270 (286)
T 1q7f_A 269 KD 270 (286)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 41
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.80 E-value=1.4e-17 Score=146.84 Aligned_cols=180 Identities=18% Similarity=0.118 Sum_probs=135.2
Q ss_pred CCCCCcceEEEccC-CCEEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 31 PKAFGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 31 ~~~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
..+..|+++++|++ +++||++..+++|.+++.+++.. .+. ......|.|+++|+.+|+|
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-------------------~~~~~~P~~i~vd~~~g~l 136 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-------------------DTGLVNPRGIVTDPVRGNL 136 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSSEEEEEEETTTTEE
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE-------------------ECCCCCccEEEEeeCCCEE
Confidence 34678999999985 68999999999999999986532 221 1123579999999558999
Q ss_pred EEEeCC---CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEc
Q 048181 109 YIADAY---SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYN 185 (310)
Q Consensus 109 yVad~~---~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d 185 (310)
|+++.. ..|.++++++...+.+.. ..+..|+++++|+++++||++|... ++|+++|
T Consensus 137 yv~~~~~~~~~I~~~~~dg~~~~~~~~----~~~~~P~gia~d~~~~~lyv~d~~~-----------------~~I~~~~ 195 (267)
T 1npe_A 137 YWTDWNRDNPKIETSHMDGTNRRILAQ----DNLGLPNGLTFDAFSSQLCWVDAGT-----------------HRAECLN 195 (267)
T ss_dssp EEEECCSSSCEEEEEETTSCCCEEEEC----TTCSCEEEEEEETTTTEEEEEETTT-----------------TEEEEEE
T ss_pred EEEECCCCCcEEEEEecCCCCcEEEEE----CCCCCCcEEEEcCCCCEEEEEECCC-----------------CEEEEEe
Confidence 999975 348889887654444432 1356899999999668999999753 6899999
Q ss_pred CCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce--ee-ecCCCCCceeeeCCCCCCc
Q 048181 186 PRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF--DI-INFQAKPHNIKRNPGLLQT 257 (310)
Q Consensus 186 ~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~--~~-~~l~g~Pdgl~~d~~~dG~ 257 (310)
+++...+.+...+..|.||+++ ++.|||++..+++|++++.++ ++. .+ .+-...|.||++.+ +++
T Consensus 196 ~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~---g~~~~~i~~g~~~~p~gi~~~~--~~~ 263 (267)
T 1npe_A 196 PAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAI---SKEMDTFHPHKQTRLYGITIAL--SQC 263 (267)
T ss_dssp TTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTT---TEEEEEECCSSCCCCCCEEEEC--SCC
T ss_pred cCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCC---CCceEEEccccccccceeeecC--ccC
Confidence 8765666666778899999986 457999999999999999763 322 11 11112599999998 875
No 42
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.80 E-value=8.1e-18 Score=153.17 Aligned_cols=177 Identities=15% Similarity=0.179 Sum_probs=133.8
Q ss_pred CCCCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
.+..|+|+|+|. +|++||+|..+++|.+++.+|....... ......|.||++|+.+|.||+
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~------------------~~~~~~P~giavdp~~g~ly~ 138 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF------------------WQELDQPRAIALDPSSGFMYW 138 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE------------------CSSCSSEEEEEEEGGGTEEEE
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE------------------eCCCCCccEEEEeCCCCEEEE
Confidence 456899999996 6889999999999999999976432211 134568999999976899999
Q ss_pred EeCC--CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 111 ADAY--SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 111 ad~~--~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
+|.. ..|+++++++...+.+.. ..+..||++++|+++++||++|+.. ++|+++|.+.
T Consensus 139 td~~~~~~I~r~~~dG~~~~~~~~----~~l~~Pnglavd~~~~~lY~aD~~~-----------------~~I~~~d~dG 197 (318)
T 3sov_A 139 TDWGEVPKIERAGMDGSSRFIIIN----SEIYWPNGLTLDYEEQKLYWADAKL-----------------NFIHKSNLDG 197 (318)
T ss_dssp EECSSSCEEEEEETTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEETTT-----------------TEEEEEETTS
T ss_pred EecCCCCEEEEEEcCCCCeEEEEE----CCCCCccEEEEeccCCEEEEEECCC-----------------CEEEEEcCCC
Confidence 9964 459999998755554432 2467899999998679999999753 6899998875
Q ss_pred CeEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEec-CCCCCceee-ecCCCCCceeeeCC
Q 048181 189 SQVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR-GPRANSFDI-INFQAKPHNIKRNP 252 (310)
Q Consensus 189 g~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~-~~~~g~~~~-~~l~g~Pdgl~~d~ 252 (310)
...+++.. .+..|.||+++. +.||+++..+++|++++.. |.. ...+ ..+. .|.+|++..
T Consensus 198 ~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~~--~~~i~~~~~-~P~~i~v~~ 259 (318)
T 3sov_A 198 TNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEG--LREIHSDIF-SPMDIHAFS 259 (318)
T ss_dssp CSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCS--CEEEECCCS-SCCCEEEEC
T ss_pred CceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCCCCc--eEEEeCCCC-CCcEEEEec
Confidence 55555554 788999999974 3699999999999999974 321 1222 3333 588888754
No 43
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.80 E-value=2.3e-17 Score=152.35 Aligned_cols=225 Identities=16% Similarity=0.086 Sum_probs=145.8
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC---CC
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA---TR 106 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~---~g 106 (310)
...+..|++|+++++|++|+++. .++|+++++++. +.+.... ........|+||++++. ++
T Consensus 25 a~~l~~P~~ia~~pdG~l~V~e~-~g~I~~~d~~G~-~~~~~~~--------------v~~~g~~g~~gia~~pdf~~~g 88 (354)
T 3a9g_A 25 ASDLEVPWSIAPLGGGRYLVTER-PGRLVLISPSGK-KLVASFD--------------VANVGEAGLLGLALHPEFPKKS 88 (354)
T ss_dssp ECSCSCEEEEEEEETTEEEEEET-TTEEEEECSSCE-EEEEECC--------------CCCSTTCSEEEEEECTTTTTSC
T ss_pred eCCCCCCeEEEEcCCCeEEEEeC-CCEEEEEeCCCc-eEeeccc--------------eeecCCCceeeEEeCCCCCcCC
Confidence 34688999999999999777776 499999987765 4443110 00123457999999844 59
Q ss_pred eEEEEeCC--------CcEEEEeCCCC-----eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeee
Q 048181 107 QLYIADAY--------SGLLVVGPNGR-----LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNI 173 (310)
Q Consensus 107 ~LyVad~~--------~gi~~id~~~~-----~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~ 173 (310)
.|||++.. ..|++++.+++ ..+.+....+.....++++|++++ +|.||||+........ ..+
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~--~~d-- 163 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRL--AQD-- 163 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGG--GTC--
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCcc--ccC--
Confidence 99999763 46999987654 123333323333455789999999 5999999754211000 000
Q ss_pred ecCCCceEEEEcCCCC--------eEEEeecCCCCCceeEEccCCCEEEEEecCCCe---EEEEEecCCCCC--------
Q 048181 174 TNDSTGRLLSYNPRSS--------QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNR---TLKYWLRGPRAN-------- 234 (310)
Q Consensus 174 ~~~~~G~l~~~d~~~g--------~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~---I~~~~~~~~~~g-------- 234 (310)
.....|+|+|++++.. ..+++..++..|+||+|+++...||++|...++ |.++.. |..-|
T Consensus 164 ~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~ 242 (354)
T 3a9g_A 164 LSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKA 242 (354)
T ss_dssp TTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCC
T ss_pred CCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCC
Confidence 1134589999999733 246677889999999999944459999998764 555432 21111
Q ss_pred ----ceee-ecC---CCCCceeee-------CCCCCCcEEEEEecCCCCCCCCceeeEEECCC--CcEE
Q 048181 235 ----SFDI-INF---QAKPHNIKR-------NPGLLQTFWEAAIITRQPAGTPVPIGQRISAF--GAVL 286 (310)
Q Consensus 235 ----~~~~-~~l---~g~Pdgl~~-------d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~--G~~~ 286 (310)
.... ..+ ...|.||++ +. +|++|++..... +|.+++.+ |++.
T Consensus 243 ~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~--~G~l~v~~~~~~--------~v~~~~~~~~g~~~ 301 (354)
T 3a9g_A 243 GRGEFVDPVIDTGSETWAPSGASFVHGDMFPGL--RGWLLIACLRGS--------MLAAVNFGDNMEVR 301 (354)
T ss_dssp CCTTSCCCSEECTTCCCCEEEEEECCSSSCGGG--TTEEEEEETTTT--------EEEEEEECGGGCEE
T ss_pred CCCCCcCCEeecCCCCcCCcceEEECCCCCccc--CCcEEEEEcCCC--------EEEEEEECCCCccc
Confidence 0011 122 246999999 56 899999988763 55555543 4443
No 44
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.80 E-value=3.2e-17 Score=148.83 Aligned_cols=189 Identities=17% Similarity=0.201 Sum_probs=135.9
Q ss_pred EEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCC
Q 048181 47 AFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYS-GLLVVGPNG 124 (310)
Q Consensus 47 l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~ 124 (310)
|+|+. .+.|++++.++.. +.+. +...+|.|+++|..+++||++|... .|+++++++
T Consensus 4 ll~~~--~~~I~~i~~~~~~~~~~~--------------------~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g 61 (316)
T 1ijq_A 4 LFFTN--RHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 61 (316)
T ss_dssp EEEEC--BSSEEEEETTSCCCEEEE--------------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred EEEEC--CCeEEEEECCCcceEehh--------------------cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCC
Confidence 44443 4579999988643 2221 3456899999996688999999874 499999886
Q ss_pred ----CeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee-cCCC
Q 048181 125 ----RLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL-RNLT 199 (310)
Q Consensus 125 ----~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~-~~l~ 199 (310)
...+.+.. ..+..|.++++|+.+++||++|... ++|.++++++...+.+. ..+.
T Consensus 62 ~~~~~~~~~~~~----~~~~~p~glavd~~~~~ly~~d~~~-----------------~~I~~~~~~g~~~~~~~~~~~~ 120 (316)
T 1ijq_A 62 AHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSVL-----------------GTVSVADTKGVKRKTLFRENGS 120 (316)
T ss_dssp ------CEEEEC----SSCSCCCEEEEETTTTEEEEEETTT-----------------TEEEEEETTSSSEEEEEECTTC
T ss_pred CCCCcccEEEEe----CCCCCcCEEEEeecCCeEEEEECCC-----------------CEEEEEeCCCCceEEEEECCCC
Confidence 22233321 2356799999996569999999753 67889988755555554 4688
Q ss_pred CCceeEEccCCCEEEEEecCC-CeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceee
Q 048181 200 GPAGVAISVDSSFLLVSEFTG-NRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIG 276 (310)
Q Consensus 200 ~pnGIa~~~dg~~Lyv~d~~~-~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v 276 (310)
.|+||+++|+++.||+++... ++|++++++|.. ...+ ..+ ..|.||++|.. +++||+++.... .|
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~~~~~~~~~-~~P~gla~d~~-~~~lY~~D~~~~--------~I 188 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENI-QWPNGITLDLL-SGRLYWVDSKLH--------SI 188 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEEEECSSC-SCEEEEEEETT-TTEEEEEETTTT--------EE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--eEEEEECCC-CCceEEEEecc-CCEEEEEECCCC--------eE
Confidence 999999999888899999876 899999998642 1122 233 46999999951 578999998763 78
Q ss_pred EEECCCCcEEEEEe
Q 048181 277 QRISAFGAVLDTIS 290 (310)
Q Consensus 277 ~~~~~~G~~~~~~~ 290 (310)
.+++.+|+..+.+.
T Consensus 189 ~~~d~dg~~~~~~~ 202 (316)
T 1ijq_A 189 SSIDVNGGNRKTIL 202 (316)
T ss_dssp EEEETTSCSCEEEE
T ss_pred EEEecCCCceEEEe
Confidence 88898887555553
No 45
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.79 E-value=2.2e-17 Score=152.32 Aligned_cols=217 Identities=17% Similarity=0.162 Sum_probs=139.3
Q ss_pred ceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
+++.+ ...+..|++|+++++|++|+++. .++|++++ ++..+.+.... ........|+||+++
T Consensus 22 ~~~~v--a~~l~~P~~ia~~pdG~l~V~e~-~g~I~~i~-~g~~~~~~~~~--------------v~~~g~~~p~gia~~ 83 (352)
T 2ism_A 22 RVEEV--VGGLEVPWALAFLPDGGMLIAER-PGRIRLFR-EGRLSTYAELS--------------VYHRGESGLLGLALH 83 (352)
T ss_dssp CEEEE--ECCCSCEEEEEECTTSCEEEEET-TTEEEEEE-TTEEEEEEECC--------------CCCSTTCSEEEEEEC
T ss_pred EEEEE--ECCCCCceEEEEcCCCeEEEEeC-CCeEEEEE-CCCccEeecce--------------EeecCCCCceeEEEC
Confidence 44444 34588999999999999777775 59999999 55444433110 011234679999998
Q ss_pred cC---CCeEEEEeCC------CcEEEEeCCCCe---EEEeeccCC--CccccCccceEEeCCCCeEEEEcCCCccCccce
Q 048181 103 YA---TRQLYIADAY------SGLLVVGPNGRL---ATQLATGAE--GQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTI 168 (310)
Q Consensus 103 ~~---~g~LyVad~~------~gi~~id~~~~~---~~~~~~~~~--g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~ 168 (310)
+. ++.|||++.. ..|++++.+++. .+.+....+ ......++++++++ +|.|||++...... . .
T Consensus 84 pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~-~-~ 160 (352)
T 2ism_A 84 PRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYER-E-L 160 (352)
T ss_dssp TTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCG-G-G
T ss_pred CCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCC-c-c
Confidence 43 4899999863 459999877542 233333222 22456789999999 59999998543110 0 0
Q ss_pred eEeeeecCCCceEEEEcCCC-------------CeEEEeecCCCCCceeEEccCCCEEEEEecCCCe--------EEEEE
Q 048181 169 VKLNITNDSTGRLLSYNPRS-------------SQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNR--------TLKYW 227 (310)
Q Consensus 169 ~~~~~~~~~~G~l~~~d~~~-------------g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~--------I~~~~ 227 (310)
..+ .....|+|+|++++. ...+++..++..|+||+++|+...||++|...+. |.++.
T Consensus 161 ~~d--~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~ 238 (352)
T 2ism_A 161 AQD--LASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV 238 (352)
T ss_dssp GGC--TTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC
T ss_pred ccC--CCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec
Confidence 000 012458999999874 2345566788899999999954459999998776 55553
Q ss_pred ecCCCCC------------ceee-ecCC--CCCceeeeCCCCCCcEEEEEecCC
Q 048181 228 LRGPRAN------------SFDI-INFQ--AKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 228 ~~~~~~g------------~~~~-~~l~--g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
. +..-| .... ..++ ..|.||++ . +|++|+++....
T Consensus 239 ~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~--~G~l~v~~~~~~ 288 (352)
T 2ism_A 239 P-GGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-F--RGDLYVAGLRGQ 288 (352)
T ss_dssp T-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-E--TTEEEEEETTTT
T ss_pred c-CCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-E--CCEEEEEECCCC
Confidence 2 21111 0001 1221 36999999 4 699999988763
No 46
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.79 E-value=5.2e-18 Score=160.75 Aligned_cols=197 Identities=11% Similarity=0.046 Sum_probs=135.6
Q ss_pred CCCCcceEEEccCCCEEEEEeCC----CeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 32 KAFGGESIAFEPVGGAFYTGVAD----GRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~~----g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
.+..|.+|+++++|+||++|..+ ..++++++.+++..-. .......|.|+++|+.+|+
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~------------------~~~~~~~P~giavd~~~G~ 241 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERL------------------SLCNARGAKTCAVHPQNGK 241 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEE------------------EEEECSSBCCCEECTTTCC
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccc------------------cccccCCCCEEEEeCCCCe
Confidence 56789999999999988888643 2366665543321000 0123568999999854899
Q ss_pred EEEEeCCCc-EEEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 108 LYIADAYSG-LLVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 108 LyVad~~~g-i~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
|||+|...+ |++++++++.. +.+..... ...+++++++++ |+ |||+|... .+|+++
T Consensus 242 lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~---~~~~~~ia~dpd-G~~LYvad~~~-----------------~~I~~~ 300 (433)
T 4hw6_A 242 IYYTRYHHAMISSYDPATGTLTEEEVMMDT---KGSNFHIVWHPT-GDWAYIIYNGK-----------------HCIYRV 300 (433)
T ss_dssp EEECBTTCSEEEEECTTTCCEEEEEEECSC---CSSCEEEEECTT-SSEEEEEETTT-----------------TEEEEE
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeccCC---CCCcccEEEeCC-CCEEEEEeCCC-----------------CEEEEE
Confidence 999998754 99999987665 44432211 234568999995 65 99999764 456665
Q ss_pred cCC--CCeE---EEee---------------cCCCCCceeEE---------ccCCCEEEEEecCCCeEEEEEecCCCCCc
Q 048181 185 NPR--SSQV---TVLL---------------RNLTGPAGVAI---------SVDSSFLLVSEFTGNRTLKYWLRGPRANS 235 (310)
Q Consensus 185 d~~--~g~~---~~~~---------------~~l~~pnGIa~---------~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~ 235 (310)
+.+ ++.+ ..+. ..+..|+||++ +++| .|||+|+.+++|++++.+| .
T Consensus 301 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~~G----~ 375 (433)
T 4hw6_A 301 DYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHTVRVLTPEG----R 375 (433)
T ss_dssp EBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTEEEEECTTS----E
T ss_pred eCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEECCCCEEEEECCCC----C
Confidence 533 2221 1222 13678999999 7777 4999999999999998654 2
Q ss_pred eee-e------------c-C-----CCCCceeeeC-CCCCCcEEEEEecCCCCCCCCceeeEEECCC
Q 048181 236 FDI-I------------N-F-----QAKPHNIKRN-PGLLQTFWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 236 ~~~-~------------~-l-----~g~Pdgl~~d-~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
... . + + ...|.||++| + +|+||||+.... +|.+++++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~--~g~lyVaD~~n~--------rIr~i~~e 432 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMK--RKCFYIGDCDNH--------RVRKIAPE 432 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETT--TTEEEEEEGGGT--------EEEEEEEC
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECC--CCEEEEEeCCCC--------EEEEEecC
Confidence 211 1 1 1 1359999999 7 999999999874 78777753
No 47
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.79 E-value=3.5e-17 Score=153.52 Aligned_cols=207 Identities=16% Similarity=0.179 Sum_probs=144.9
Q ss_pred CEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCc-EEEEeCC
Q 048181 46 GAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSG-LLVVGPN 123 (310)
Q Consensus 46 ~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~g-i~~id~~ 123 (310)
.|+|+. .+.|++++.++.. +.+. .....|.||++|..+++||++|...+ |++++++
T Consensus 85 ~ll~~~--~~~I~~i~l~~~~~~~~~--------------------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~ 142 (400)
T 3p5b_L 85 YLFFTN--RHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD 142 (400)
T ss_dssp EEEEEE--TTEEEEECTTSCSCEEEE--------------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-
T ss_pred eeEEec--cceeEEEccCCcceeEec--------------------cccCcceEEeeeeccCceEEEecCCCeEEEEEcc
Confidence 344444 5799999988653 3221 34568999999977899999998754 8999987
Q ss_pred CC----eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee-cCC
Q 048181 124 GR----LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL-RNL 198 (310)
Q Consensus 124 ~~----~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~-~~l 198 (310)
+. ..+.+.. ..+..|+++|+|..+++||++|... ++|.++++++...+.+. ..+
T Consensus 143 g~~~~~~~~~~~~----~~~~~p~glavD~~~~~lY~~d~~~-----------------~~I~~~~~~g~~~~~l~~~~~ 201 (400)
T 3p5b_L 143 RAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSVL-----------------GTVSVADTKGVKRKTLFRENG 201 (400)
T ss_dssp -----CCCEEEEC----SSCSCEEEEEEETTTTEEEEEETTT-----------------TEEEEECTTTCSEEEEEECSS
T ss_pred cCCCCCcceEEEe----CCCCCcccEEEEecCCceEEEECCC-----------------CeEEEEeCCCCceEEEEeCCC
Confidence 62 2233322 2356799999998569999999753 68999998765555544 478
Q ss_pred CCCceeEEccCCCEEEEEecC-CCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCcee
Q 048181 199 TGPAGVAISVDSSFLLVSEFT-GNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPI 275 (310)
Q Consensus 199 ~~pnGIa~~~dg~~Lyv~d~~-~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~ 275 (310)
..|+||+++|.++.||++|.. .++|++++++|.. ...+ .++ ..|.||++|.. +++||+++.... .
T Consensus 202 ~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~--~~~~~~~~l-~~P~glavd~~-~~~lY~aD~~~~--------~ 269 (400)
T 3p5b_L 202 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENI-QWPNGITLDLL-SGRLYWVDSKLH--------S 269 (400)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS--CEEEECSSC-SCEEEEEEETT-TTEEEEEETTTT--------E
T ss_pred CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc--cEEEEECCC-CceEEEEEEeC-CCEEEEEECCCC--------E
Confidence 899999999988889999986 4899999998742 2222 333 46999999941 678999998763 7
Q ss_pred eEEECCCCcEEEEEecCCCccccceeEEEecCC
Q 048181 276 GQRISAFGAVLDTISFEAQYSTTPISEVQPFGG 308 (310)
Q Consensus 276 v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~~~ 308 (310)
|.+++.+|.....+....+ .+.....++-+++
T Consensus 270 I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEK-RLAHPFSLAVFED 301 (400)
T ss_dssp EEEEETTSCCCEEEEECSS-TTSSEEEEEEETT
T ss_pred EEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCC
Confidence 8889988876555543211 1233444444444
No 48
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=9.8e-18 Score=158.74 Aligned_cols=197 Identities=11% Similarity=0.058 Sum_probs=136.1
Q ss_pred CCCCcceEEEccCCC-EEEEEeCCC----eEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC
Q 048181 32 KAFGGESIAFEPVGG-AFYTGVADG----RILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 32 ~~~~Pegia~d~~G~-l~~~d~~~g----~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g 106 (310)
.+..|.+|+++++|+ +|+++..++ .++.+++++++..... ......|.|+++++.+|
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~------------------l~~~~~p~giavdp~~g 238 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE------------------LTKGQNCNGAETHPING 238 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE------------------EEECSSCCCEEECTTTC
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee------------------eccCCCceEEEEeCCCC
Confidence 456899999999998 777776443 5677777664421000 01245799999985489
Q ss_pred eEEEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 107 QLYIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 107 ~LyVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
+|||+|... .|++++++++....+.... ....|++++++++ |+ |||+|... .+|+++
T Consensus 239 ~lyv~d~~~~~V~~~~~~~~~~~~~~~~~---~~~~P~gia~~pd-G~~lyv~d~~~-----------------~~I~~~ 297 (430)
T 3tc9_A 239 ELYFNSWNAGQVFRYDFTTQETTPLFTIQ---DSGWEFHIQFHPS-GNYAYIVVVNQ-----------------HYILRS 297 (430)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEEECS---SSSCCEEEEECTT-SSEEEEEETTT-----------------TEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEEEcC---CCCcceeEEEcCC-CCEEEEEECCC-----------------CEEEEE
Confidence 999999875 4999999987664443221 1357999999995 76 99999764 355555
Q ss_pred cCC--CCeE---EEee---------------cCCCCCc-eeEEc--------cCCCEEEEEecCCCeEEEEEecCCCCCc
Q 048181 185 NPR--SSQV---TVLL---------------RNLTGPA-GVAIS--------VDSSFLLVSEFTGNRTLKYWLRGPRANS 235 (310)
Q Consensus 185 d~~--~g~~---~~~~---------------~~l~~pn-GIa~~--------~dg~~Lyv~d~~~~~I~~~~~~~~~~g~ 235 (310)
+.+ +++. ..+. ..+..|+ |++++ ++| .|||+|+.+++|++++.+| .
T Consensus 298 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~~G----~ 372 (430)
T 3tc9_A 298 DYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTPQG----R 372 (430)
T ss_dssp EEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECTTS----E
T ss_pred eCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECCCC----c
Confidence 433 1211 1111 1367898 89885 446 5999999999999998553 2
Q ss_pred eee-ecC------------------CCCCceeeeCCCCC-CcEEEEEecCCCCCCCCceeeEEECCC
Q 048181 236 FDI-INF------------------QAKPHNIKRNPGLL-QTFWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 236 ~~~-~~l------------------~g~Pdgl~~d~~~d-G~l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
... .+. ...|.||++|+ + |+||||+.... +|.+++++
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~--~~g~lyVaD~~n~--------rIr~i~~e 429 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE--ERECFFIGDRENR--------RIRKIGYE 429 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET--TTTEEEEEEGGGT--------EEEEEEEC
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC--CCCEEEEEECCCC--------eEEEEccC
Confidence 221 110 12699999997 5 89999998874 78888765
No 49
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=4.1e-17 Score=148.32 Aligned_cols=190 Identities=14% Similarity=0.188 Sum_probs=131.5
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce---EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF---TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g 106 (310)
.+.+..|.+++++++|++|+++..+++|++++++++. ..+...+ ..|. .......|.+|++++.+|
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~-------~~g~----~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM-------QPGS----DQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT-------BCCC----STTCCSSEEEEEECTTTC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC-------CCCC----CccccCCCcEEEEeCCCC
Confidence 3567799999999999999999999999999998763 2221100 0000 012455899999984489
Q ss_pred eEEEEeC-C-CcEEEEeCCCCeEEEeeccCCC-----ccccCccceEEeCCCCeEEEEcCCCc----cCcc--ceeEee-
Q 048181 107 QLYIADA-Y-SGLLVVGPNGRLATQLATGAEG-----QAFHFLDGLDVDQGTGVVYFTDASGV----YDFR--TIVKLN- 172 (310)
Q Consensus 107 ~LyVad~-~-~gi~~id~~~~~~~~~~~~~~g-----~~~~~pndvavd~~~G~lyvtd~~~~----~~~~--~~~~~~- 172 (310)
+|||+|. . ..|.++++++..+..+.....+ ..+..|+++++++++|++||+|.... +... .+...+
T Consensus 156 ~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp CEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 9999995 3 4599999876555554322221 36788999999994499999997653 1111 111100
Q ss_pred --------------------------eecCCCceEEEEcCCCCeEEEee----cCCCCCceeEEccCCCEEEEEecCCCe
Q 048181 173 --------------------------ITNDSTGRLLSYNPRSSQVTVLL----RNLTGPAGVAISVDSSFLLVSEFTGNR 222 (310)
Q Consensus 173 --------------------------~~~~~~G~l~~~d~~~g~~~~~~----~~l~~pnGIa~~~dg~~Lyv~d~~~~~ 222 (310)
.....+.+++.++..++++.... ..+..|+||++++|| .|||++..+++
T Consensus 236 ~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~ 314 (329)
T 3fvz_A 236 HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNT 314 (329)
T ss_dssp CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCC
T ss_pred ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCE
Confidence 00011236777886667665543 457789999999999 69999999999
Q ss_pred EEEEEecCC
Q 048181 223 TLKYWLRGP 231 (310)
Q Consensus 223 I~~~~~~~~ 231 (310)
|++|++++.
T Consensus 315 I~~~~~~~~ 323 (329)
T 3fvz_A 315 VWKFTLTEK 323 (329)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeCCcc
Confidence 999998763
No 50
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.76 E-value=1.2e-16 Score=161.38 Aligned_cols=212 Identities=16% Similarity=0.194 Sum_probs=146.2
Q ss_pred ccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCc-EEE
Q 048181 42 EPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSG-LLV 119 (310)
Q Consensus 42 d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~g-i~~ 119 (310)
+....|||+. ...|++++.++. .+.+. .....|.||++|..+++||++|...+ |++
T Consensus 393 ~~~p~Ll~an--~~~Ir~i~l~~~~~~~l~--------------------~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~ 450 (791)
T 3m0c_C 393 GSIAYLFFTN--RHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICS 450 (791)
T ss_dssp TSCCEEEEEC--BSSEEEECTTSCCCEEEE--------------------CSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccccccc--ccceeEeeccCCcceeee--------------------cCCCceEEEeecccCCeeEEeeccceeEEE
Confidence 3333444443 457888887743 33222 34567999999966899999998755 889
Q ss_pred EeCCCC----eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee
Q 048181 120 VGPNGR----LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL 195 (310)
Q Consensus 120 id~~~~----~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~ 195 (310)
+++++. ..+.+.. ..+..|++||+|..+++|||+|... ++|++++.++...+++.
T Consensus 451 ~~l~g~~~~~~~~~vi~----~~l~~P~GLAvD~~~~~LY~tD~~~-----------------~~I~v~~ldG~~~~~l~ 509 (791)
T 3m0c_C 451 TQLDRAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSVL-----------------GTVSVADTKGVKRKTLF 509 (791)
T ss_dssp EEC--------CEEEEC----SSCSCCCEEEEETTTTEEEEEETTT-----------------TEEEEEETTSSSEEEEE
T ss_pred EeccCCCCCcceeEEEe----cCCCCcceeeeeecCCcEEEEecCC-----------------CeEEEEeCCCCeEEEEE
Confidence 988763 2222322 2467899999998667999999764 68999998765555554
Q ss_pred -cCCCCCceeEEccCCCEEEEEecCC-CeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCC
Q 048181 196 -RNLTGPAGVAISVDSSFLLVSEFTG-NRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGT 271 (310)
Q Consensus 196 -~~l~~pnGIa~~~dg~~Lyv~d~~~-~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~ 271 (310)
..+..|+|||++|.++.||++|... ++|++++++|.. ...+ .++ ..|.||++|.. +|+||+++....
T Consensus 510 ~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~--~~~lv~~~l-~~P~GLavD~~-~~~LYwaD~~~~----- 580 (791)
T 3m0c_C 510 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENI-QWPNGITLDLL-SGRLYWVDSKLH----- 580 (791)
T ss_dssp ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEEEECSSC-SCEEEEEEETT-TTEEEEEETTTT-----
T ss_pred eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc--eEEEEeCCC-CCceEEEEecC-CCeEEEEeCCCC-----
Confidence 5788999999999878899999876 899999998742 2222 334 36999999931 789999997653
Q ss_pred CceeeEEECCCCcEEEEEecCCCccccceeEEEecCCC
Q 048181 272 PVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGGA 309 (310)
Q Consensus 272 ~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~~~~ 309 (310)
.|.+++.+|+....+....+ .+.....++.+++.
T Consensus 581 ---~I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~~~ 614 (791)
T 3m0c_C 581 ---SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDK 614 (791)
T ss_dssp ---EEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTE
T ss_pred ---cEEEEecCCCceEEEecCCC-ccCCCCEEEEeCCE
Confidence 78888988876655543222 22344455555553
No 51
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.75 E-value=4.8e-17 Score=147.31 Aligned_cols=198 Identities=14% Similarity=0.187 Sum_probs=135.6
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI 110 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV 110 (310)
..|.++++++ +|+||+++.. +.|++++++++. +.+... .. ......|+++++| + +|+|||
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~--------~~-------~~~~~~p~~i~~d-~~~G~l~v 142 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATS--------VD-------GVPFKWLYAVTVD-QRTGIVYF 142 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESE--------ET-------TEECSCEEEEEEC-TTTCCEEE
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEeccc--------CC-------CCcccccceEEEe-cCCCEEEE
Confidence 3699999997 7887777764 569999988543 333210 00 0123579999998 6 899999
Q ss_pred EeCC------------------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEe
Q 048181 111 ADAY------------------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKL 171 (310)
Q Consensus 111 ad~~------------------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~ 171 (310)
+|.. .+|+++|+++++.+.+.. .+..||+++++++ | .+||+|+..
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p~gia~~~d-g~~lyv~d~~~---------- 206 (322)
T 2fp8_A 143 TDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----ELHVPGGAEVSAD-SSFVLVAEFLS---------- 206 (322)
T ss_dssp EESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----EESCCCEEEECTT-SSEEEEEEGGG----------
T ss_pred ECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----CCccCcceEECCC-CCEEEEEeCCC----------
Confidence 9864 249999998877655432 3578999999995 6 599999753
Q ss_pred eeecCCCceEEEEcCCC---CeEEEeecCCCCCceeEEccCCCEEEEEecC----------CCeEEEEEecCCCCCceee
Q 048181 172 NITNDSTGRLLSYNPRS---SQVTVLLRNLTGPAGVAISVDSSFLLVSEFT----------GNRTLKYWLRGPRANSFDI 238 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~~~---g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~----------~~~I~~~~~~~~~~g~~~~ 238 (310)
++|++|+.++ ++.+.+.. +..|+||+++++|+ |||++.. .++|++|+.++........
T Consensus 207 -------~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~ 277 (322)
T 2fp8_A 207 -------HQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL 277 (322)
T ss_dssp -------TEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC
T ss_pred -------CeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEEC
Confidence 5788888763 34444443 33399999999997 9999876 5789999875421111111
Q ss_pred -ecC-CCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCc
Q 048181 239 -INF-QAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGA 284 (310)
Q Consensus 239 -~~l-~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~ 284 (310)
.+. ...|.+++. . +|+|||+..... .+.+++++.+
T Consensus 278 ~~g~~~~~~~~~~~-~--~g~L~v~~~~~~--------~i~~~~~~~~ 314 (322)
T 2fp8_A 278 PPPFAGEHFEQIQE-H--DGLLYIGTLFHG--------SVGILVYDKK 314 (322)
T ss_dssp CTTTTTSCCCEEEE-E--TTEEEEECSSCS--------EEEEEEC---
T ss_pred CCCCccccceEEEE-e--CCEEEEeecCCC--------ceEEEecccc
Confidence 121 235788877 4 689999987653 7888876543
No 52
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=4.3e-16 Score=142.55 Aligned_cols=195 Identities=11% Similarity=0.100 Sum_probs=136.0
Q ss_pred CCCCcceEEEccCCCEEEEEeC-----CCeEEEEECCCce-E-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 32 KAFGGESIAFEPVGGAFYTGVA-----DGRILKYQAPDGF-T-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~-----~g~I~r~~~~g~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
.+..|.++++|++|+||++|.. .++|++++++++. . .+.... ........|++++++++
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~--------------~~~~~~~~~~~v~vd~~ 130 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPP--------------PITLSNSFVNDLAVDLI 130 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCT--------------TTSCTTCCCCEEEEETT
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECCh--------------hhcccccccceEEEecC
Confidence 5779999999999999999976 5899999987443 2 332110 00122356899999855
Q ss_pred CCeEEEEeC---C-CcEEEEeCCCCeEEEeecc------------CCCccc-------------cCccceEEeCCCCeEE
Q 048181 105 TRQLYIADA---Y-SGLLVVGPNGRLATQLATG------------AEGQAF-------------HFLDGLDVDQGTGVVY 155 (310)
Q Consensus 105 ~g~LyVad~---~-~gi~~id~~~~~~~~~~~~------------~~g~~~-------------~~pndvavd~~~G~ly 155 (310)
+|.+||+|. . .+|+++|+++++...+... .+|..+ ..+|+|++++++..||
T Consensus 131 ~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 131 HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY 210 (343)
T ss_dssp TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE
T ss_pred CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEE
Confidence 789999997 3 4599999987765543321 112111 3579999999633799
Q ss_pred EEcCCCccCccceeEeeeecCCCceEEEEcCC---CCe---------EEEeecCCCCCceeEEccCCCEEEEEecCCCeE
Q 048181 156 FTDASGVYDFRTIVKLNITNDSTGRLLSYNPR---SSQ---------VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRT 223 (310)
Q Consensus 156 vtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~---~g~---------~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I 223 (310)
+++... .++|+++.+ .+. ++. ......|+||++|++|+ ||+++...++|
T Consensus 211 ~~~~~~-----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~pdgia~d~~G~-l~va~~~~~~V 271 (343)
T 2qe8_A 211 LSPMHS-----------------TSMYRIKSADLSNLQLTDAELGSKIER-YSEKPICDGISIDKDHN-IYVGDLAHSAI 271 (343)
T ss_dssp EEESSC-----------------SEEEEEEHHHHTCTTCCHHHHHTTCEE-EEECCSCSCEEECTTCC-EEEEEGGGTEE
T ss_pred EEeCCC-----------------CeEEEEEHHHhcCCCCChhhhhcceEe-cccCCCCceEEECCCCC-EEEEccCCCeE
Confidence 998753 367887631 010 111 12334799999999986 99999999999
Q ss_pred EEEEe-cCCCCCceee-ecC--CCCCceeeeCCCCCCcEEEEEecC
Q 048181 224 LKYWL-RGPRANSFDI-INF--QAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 224 ~~~~~-~~~~~g~~~~-~~l--~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
.+|+. ++ +... ... ...|+++++++ +|+||++....
T Consensus 272 ~~~d~~~G----~~~~~~~~~~~~~p~~va~~~--~g~l~v~~~~~ 311 (343)
T 2qe8_A 272 GVITSADR----AYKLLVTDEKLSWTDSFNFGS--DGYLYFDCNQL 311 (343)
T ss_dssp EEEETTTT----EEEEEEECGGGSCEEEEEECT--TSCEEEEECCG
T ss_pred EEEECCCC----CEEEEEECCceecCCeeEECC--CCcEEEEeCcc
Confidence 99997 43 3333 222 24699999999 99999998754
No 53
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=2.8e-16 Score=150.19 Aligned_cols=203 Identities=15% Similarity=0.102 Sum_probs=136.9
Q ss_pred CCCCcceEEE-------ccCCC-EEEEEeCCC------eEEEEECCC--ceEEeeeecCCCCccccCCCccccCCCCCCc
Q 048181 32 KAFGGESIAF-------EPVGG-AFYTGVADG------RILKYQAPD--GFTDFAFTTPTRSKAVCDGTTNLDLGPICRR 95 (310)
Q Consensus 32 ~~~~Pegia~-------d~~G~-l~~~d~~~g------~I~r~~~~g--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 95 (310)
.+..|.+|+| +++|+ +|+++..++ .|+.++.+. .+..- .++ .......+
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~-----------~~~----~~v~~~~~ 248 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDR-----------SDI----QLIAAYKQ 248 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTT-----------SCE----EEEEEESC
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeec-----------ccc----eeeccCCC
Confidence 4567999999 99998 777777653 377886543 33100 000 00013457
Q ss_pred eeeEEEecCCCeEEEEeCCCc-EEEEeCC-------CCeE------------EEeeccCCCccccCccceEEeCCCCe-E
Q 048181 96 TFGLALHYATRQLYIADAYSG-LLVVGPN-------GRLA------------TQLATGAEGQAFHFLDGLDVDQGTGV-V 154 (310)
Q Consensus 96 P~Gla~d~~~g~LyVad~~~g-i~~id~~-------~~~~------------~~~~~~~~g~~~~~pndvavd~~~G~-l 154 (310)
|+|+++++.++.||+++...+ |+++|++ ++.. ..+.... ....|.+++++++ |+ |
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~---~~~~p~~ia~~p~-G~~l 324 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA---DPSWEFQIFIHPT-GKYA 324 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS---SSSCCEEEEECTT-SSEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC---CCCCceEEEEcCC-CCEE
Confidence 999999866899999998876 9999987 5543 1222211 1246889999995 76 8
Q ss_pred EEEcCCCccCccceeEeeeecCCCceEEEEcC--CCCeE---EEee---------------cCCCCCc-eeEEc------
Q 048181 155 YFTDASGVYDFRTIVKLNITNDSTGRLLSYNP--RSSQV---TVLL---------------RNLTGPA-GVAIS------ 207 (310)
Q Consensus 155 yvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~--~~g~~---~~~~---------------~~l~~pn-GIa~~------ 207 (310)
||+|+.. .+|++++. .++.+ ..++ ..|..|. |++++
T Consensus 325 YvaD~~~-----------------h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~ 387 (496)
T 3kya_A 325 YFGVINN-----------------HYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTG 387 (496)
T ss_dssp EEEETTT-----------------TEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCS
T ss_pred EEEeCCC-----------------CEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccc
Confidence 9999865 35666443 22222 2222 1456899 88887
Q ss_pred -cCCCEEEEEecCCCeEEEEEecCCCCCceee-e------------------c-C-----CCCCceeeeCCCCC-CcEEE
Q 048181 208 -VDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I------------------N-F-----QAKPHNIKRNPGLL-QTFWE 260 (310)
Q Consensus 208 -~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~------------------~-l-----~g~Pdgl~~d~~~d-G~l~v 260 (310)
++| .|||+|+.++||++|+.+|. +.. + + . ...|.||++|+ + |+|||
T Consensus 388 ~~~g-~lyVaD~~N~rIr~i~~~G~----v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~--~~g~lyV 460 (496)
T 3kya_A 388 EEEY-DFYFVDRLNFCVRKVTPEGI----VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD--VKEMFYV 460 (496)
T ss_dssp SCCE-EEEEEEGGGTEEEEECTTCB----EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET--TTTEEEE
T ss_pred cCCC-eEEEEECCCCEEEEEeCCCC----EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC--CCCEEEE
Confidence 455 59999999999999986542 111 1 1 0 12599999998 8 99999
Q ss_pred EEecCCCCCCCCceeeEEECCCCcE
Q 048181 261 AAIITRQPAGTPVPIGQRISAFGAV 285 (310)
Q Consensus 261 a~~~~~~~~~~~~~~v~~~~~~G~~ 285 (310)
|+..+. +|.+++++|++
T Consensus 461 aD~~N~--------rIrki~~~~~~ 477 (496)
T 3kya_A 461 HDQVGH--------TIRTISMEQEE 477 (496)
T ss_dssp EETTTT--------EEEEEEECCCC
T ss_pred EeCCCC--------EEEEEECCCCc
Confidence 999874 89999988763
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=7.3e-15 Score=132.67 Aligned_cols=225 Identities=10% Similarity=0.072 Sum_probs=145.8
Q ss_pred ceeeeecceEEEeCCCCCCCcceEEEccCCCEEEEEeC-------CCeEEEEECCCceEEeeeecCCCCccccCCCcccc
Q 048181 16 RMVFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVA-------DGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLD 88 (310)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~-------~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 88 (310)
....+++.+.+.++.. +|.+++++++|+.+|+... ++.|+.++.+++......
T Consensus 26 ~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~----------------- 85 (353)
T 3vgz_A 26 FSTQAAEEMLRKAVGK---GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI----------------- 85 (353)
T ss_dssp -------CEEEEEEES---SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE-----------------
T ss_pred ccccchhhhhhhhhcc---CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE-----------------
Confidence 3445566666676663 6999999999876666553 568999998754321110
Q ss_pred CCCCCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEeeccCCC-----ccccCccceEEeCCCCeEEEEcCCCc
Q 048181 89 LGPICRRTFGLALHYATRQLYIADAYS-GLLVVGPNGRLATQLATGAEG-----QAFHFLDGLDVDQGTGVVYFTDASGV 162 (310)
Q Consensus 89 ~~~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g-----~~~~~pndvavd~~~G~lyvtd~~~~ 162 (310)
.....|.++++++.++.+|+++... .|..+|.++++.........+ .....|++++++++++.+|+++..
T Consensus 86 --~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-- 161 (353)
T 3vgz_A 86 --HNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-- 161 (353)
T ss_dssp --EESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--
T ss_pred --ecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--
Confidence 1123588999984344599998754 499999988765332222111 111247899999965568988742
Q ss_pred cCccceeEeeeecCCCceEEEEcCCCCeEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-eec
Q 048181 163 YDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-IIN 240 (310)
Q Consensus 163 ~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~ 240 (310)
.+++|+.+|..+++...... .-..|++++++|||++||+++. .++|+.++... +... ...
T Consensus 162 --------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~---~~~~~~~~ 223 (353)
T 3vgz_A 162 --------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTAD---NKILSRKK 223 (353)
T ss_dssp --------------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTT---TEEEEEEE
T ss_pred --------------CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCC---CeEEEEEE
Confidence 14789999998887766555 3446999999999999999876 78899988753 2221 111
Q ss_pred -----CCCCCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 241 -----FQAKPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 241 -----l~g~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
....|.++++++ +|+ +|++..... .+..+|. +|+++..+..+
T Consensus 224 ~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~--------~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDT--ARQRAFITDSKAA--------EVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp CCCSSSCCCEEEEEEET--TTTEEEEEESSSS--------EEEEEETTTCCEEEEEECS
T ss_pred cCCCCCCcccceEEECC--CCCEEEEEeCCCC--------EEEEEECCCCcEEEEEEcC
Confidence 123577899999 886 888876542 4555664 45666555554
No 55
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=5.9e-15 Score=131.34 Aligned_cols=203 Identities=11% Similarity=0.083 Sum_probs=140.1
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEEC-CCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQA-PDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
++.+..+. ..|.+++++++|++|+++..+++|+++++ ++..+.+.... .......|++++++
T Consensus 61 ~~~~~~~~--~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~---------------~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 61 LSPEMHPS--HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF---------------EGKKLNSPNDVCLA 123 (296)
T ss_dssp EEEEESSC--SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE---------------TTEECCCCCCEEEC
T ss_pred eEEEECCC--CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc---------------CCCCCCCCCCEEEC
Confidence 44454443 57999999999998888877799999998 45554432100 01123468899998
Q ss_pred cCCCeEEEEeC------------------CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccC
Q 048181 103 YATRQLYIADA------------------YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYD 164 (310)
Q Consensus 103 ~~~g~LyVad~------------------~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~ 164 (310)
++|+||++|. ..+|++++++ ++.+.+.. .+..||+++++++ |++++++...
T Consensus 124 -~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~gi~~s~d-g~~lv~~~~~--- 192 (296)
T 3e5z_A 124 -PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-----DRVKPNGLAFLPS-GNLLVSDTGD--- 192 (296)
T ss_dssp -TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-----CCSSEEEEEECTT-SCEEEEETTT---
T ss_pred -CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec-----CCCCCccEEECCC-CCEEEEeCCC---
Confidence 7999999864 2369999988 55554432 3567899999995 8777888653
Q ss_pred ccceeEeeeecCCCceEEEEcCC-CCeE----EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeee
Q 048181 165 FRTIVKLNITNDSTGRLLSYNPR-SSQV----TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDII 239 (310)
Q Consensus 165 ~~~~~~~~~~~~~~G~l~~~d~~-~g~~----~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~ 239 (310)
++|++++.+ ++++ +.+......|+||+++++|+ ||++. .++|++|+.++. .....
T Consensus 193 --------------~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~---~~~~~ 252 (296)
T 3e5z_A 193 --------------NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGD---ELGRV 252 (296)
T ss_dssp --------------TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSC---EEEEE
T ss_pred --------------CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCC---EEEEE
Confidence 567777754 3544 22212345799999999997 89998 789999987642 12223
Q ss_pred cCCCCCceeeeC-CCCCC-cEEEEEecCCCCCCCCceeeEEECCCCcEE
Q 048181 240 NFQAKPHNIKRN-PGLLQ-TFWEAAIITRQPAGTPVPIGQRISAFGAVL 286 (310)
Q Consensus 240 ~l~g~Pdgl~~d-~~~dG-~l~va~~~~~~~~~~~~~~v~~~~~~G~~~ 286 (310)
..+..|.+++++ + +| .||++... .+.+++++.+-+
T Consensus 253 ~~~~~~~~~~f~~~--d~~~L~v~t~~----------~l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQTTSNLCFGGP--EGRTLYMTVST----------EFWSIETNVRGL 289 (296)
T ss_dssp ECSSCCCEEEEEST--TSCEEEEEETT----------EEEEEECSCCBC
T ss_pred ECCCCceeEEEECC--CCCEEEEEcCC----------eEEEEEcccccc
Confidence 333338999994 5 66 59999764 588898865543
No 56
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.70 E-value=5.6e-15 Score=132.96 Aligned_cols=185 Identities=14% Similarity=0.096 Sum_probs=128.8
Q ss_pred CcceEEEccCCCEEEEEeCC--CeEEEEECC-CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 35 GGESIAFEPVGGAFYTGVAD--GRILKYQAP-DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~--g~I~r~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
.|.+++++++|++|+++..+ .+|++++.. ++.+.+... .....|.|++.. .++++|++
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~------------------~~~~~~~g~~~~-~~~~~~v~ 133 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL------------------PDAIFLNGITPL-SDTQYLTA 133 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC------------------TTCSCEEEEEES-SSSEEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC------------------CCccccCccccc-CCCcEEEE
Confidence 69999999999988888653 369998854 445443310 223467899875 67889999
Q ss_pred eCCC-cEEEEeCCCCeEEEe--ecc----CCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 112 DAYS-GLLVVGPNGRLATQL--ATG----AEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 112 d~~~-gi~~id~~~~~~~~~--~~~----~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
|... .|+++|+.+++.+.+ ... .....+..||++ +++++.+||+|+.. ++|++|
T Consensus 134 d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~-----------------~~I~~~ 194 (306)
T 2p4o_A 134 DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK-----------------MLLLRI 194 (306)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT-----------------TEEEEE
T ss_pred ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC-----------------CEEEEE
Confidence 9754 599999886533222 110 111246789998 55456899999753 578888
Q ss_pred cCCC-Ce---EEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-e--ecCC-CCCceeeeC---CC
Q 048181 185 NPRS-SQ---VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-I--INFQ-AKPHNIKRN---PG 253 (310)
Q Consensus 185 d~~~-g~---~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~--~~l~-g~Pdgl~~d---~~ 253 (310)
+.+. ++ .+.+. .+..|.||++++||+ |||++..+++|.+|+.+| ... + ...+ ..|.+++++ +
T Consensus 195 ~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G----~~~~~~~~~~~~~~p~~~a~~g~~~- 267 (306)
T 2p4o_A 195 PVDSTDKPGEPEIFV-EQTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR----STTIIAQAEQGVIGSTAVAFGQTEG- 267 (306)
T ss_dssp EBCTTSCBCCCEEEE-ESCCCSSEEEBTTCC-EEEECBTTCCEEEECTTC----CEEEEECGGGTCTTEEEEEECCSTT-
T ss_pred EeCCCCCCCccEEEe-ccCCCCCeEECCCCC-EEEEeCCCCeEEEECCCC----CEEEEeecccccCCceEEEEecccC-
Confidence 8653 32 22332 346899999999996 899999999999998653 222 1 1222 469999997 6
Q ss_pred CC-CcEEEEEecC
Q 048181 254 LL-QTFWEAAIIT 265 (310)
Q Consensus 254 ~d-G~l~va~~~~ 265 (310)
+ +.|||+....
T Consensus 268 -d~~~LyVt~~~~ 279 (306)
T 2p4o_A 268 -DCTAIYVVTNGG 279 (306)
T ss_dssp -TTTEEEEEECTT
T ss_pred -CCCEEEEECCCC
Confidence 6 5899998764
No 57
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.67 E-value=1.5e-14 Score=132.54 Aligned_cols=177 Identities=14% Similarity=0.106 Sum_probs=113.9
Q ss_pred CCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC---
Q 048181 29 FPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA--- 104 (310)
Q Consensus 29 ~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~--- 104 (310)
+...|..|++|++.++|++|+++...|+|++++++++ ...+... +. ........|+||++++.
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~-~~------------v~~~g~~GllGia~~Pdf~~ 93 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEV-PG------------VSPSGEGGLLGIALSPDYAS 93 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-TT------------CCCBTTBSEEEEEECTTHHH
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeeccc-Cc------------eeecCCCCceeeEecccccc
Confidence 3456899999999999998888877999999987643 3333211 00 01123457899999842
Q ss_pred CCeEEEEeC---CCcEEEEeCCCC--------eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCc--cCccceeEe
Q 048181 105 TRQLYIADA---YSGLLVVGPNGR--------LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGV--YDFRTIVKL 171 (310)
Q Consensus 105 ~g~LyVad~---~~gi~~id~~~~--------~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~--~~~~~~~~~ 171 (310)
++.|||+.. .++|.++..+.+ ..+++..........+.+.|++++ +|.|||+..... ...++
T Consensus 94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd---- 168 (347)
T 3das_A 94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQD---- 168 (347)
T ss_dssp HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTC----
T ss_pred CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccC----
Confidence 689999743 245888876541 123333333222345678899999 599999953211 00000
Q ss_pred eeecCCCceEEEEcCCCC--------eEEEeecCCCCCceeEEccCCCEEEEEecCCC---eEEEE
Q 048181 172 NITNDSTGRLLSYNPRSS--------QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGN---RTLKY 226 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~~~g--------~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~---~I~~~ 226 (310)
.....|+|+|++++.. ..+++..++..|+||+|+|+|+ ||++|.... +|.++
T Consensus 169 --~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i 231 (347)
T 3das_A 169 --RKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAI 231 (347)
T ss_dssp --TTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEE
T ss_pred --CCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEE
Confidence 0123588999988633 2345667888889999998875 888887553 45544
No 58
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.65 E-value=1.7e-15 Score=151.63 Aligned_cols=193 Identities=17% Similarity=0.175 Sum_probs=134.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCC-cEEEEeC
Q 048181 44 VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYS-GLLVVGP 122 (310)
Q Consensus 44 ~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~ 122 (310)
...|||+. .+.|++++.++..... +......|.||++++.+++||++|... .|+++++
T Consensus 377 ~~~ll~~~--~~~I~~id~~~~~~~~-------------------~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~ 435 (699)
T 1n7d_A 377 IAYLFFTN--RHEVRKMTLDRSEYTS-------------------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL 435 (699)
T ss_dssp CCCBCCCC--TTC-CEECTTSCCEEC-------------------CSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEES
T ss_pred ceeEEecC--ccceEEEeCCCCccee-------------------eeccCcceEEEccccccCeEEEEecCCCeEEEEec
Confidence 34444443 4578888877543211 123456899999996789999999764 4999998
Q ss_pred CC----CeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee-cC
Q 048181 123 NG----RLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL-RN 197 (310)
Q Consensus 123 ~~----~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~-~~ 197 (310)
++ .....+. ...+..|.+||+|..+|+|||+|... ++|+++++++...+++. ..
T Consensus 436 ~g~~~~~~~~~~i----~~~~~~P~glavD~~~g~LY~tD~~~-----------------~~I~v~d~dg~~~~~l~~~~ 494 (699)
T 1n7d_A 436 DRAHGVSSYDTVI----SRDIQAPDGLAVDWIHSNIYWTDSVL-----------------GTVSVADTKGVKRKTLFREQ 494 (699)
T ss_dssp CCCCC-CCCCCBC----CSCC--CCCEECCCSSSBCEECCTTT-----------------SCEEEEBSSSCCEEEECCCS
T ss_pred CCCCCCcceEEEE----eCCCCCcceEEEEeeCCcEEEEeccC-----------------CeEEEEecCCCceEEEEeCC
Confidence 75 2211111 12356799999996569999999753 67999998765555554 46
Q ss_pred CCCCceeEEccCCCEEEEEecCC-CeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCce
Q 048181 198 LTGPAGVAISVDSSFLLVSEFTG-NRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVP 274 (310)
Q Consensus 198 l~~pnGIa~~~dg~~Lyv~d~~~-~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~ 274 (310)
+..|+||+++|++++||+++... ++|++++++|... ..+ ..+ ..|.||++|.. .++||+++....
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~~l~~~~l-~~PnGlavd~~-~~~LY~aD~~~~-------- 562 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENI-QWPNGITLDLL-SGRLYWVDSKLH-------- 562 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--CEESCSSC-SSCCCEEECTT-TCCEEEEETTTT--------
T ss_pred CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--eEEEeCCC-CCccEEEEecc-CCEEEEEecCCC--------
Confidence 78999999999888899999876 8999999886421 122 333 46999999961 468999997753
Q ss_pred eeEEECCCCcEEEEEe
Q 048181 275 IGQRISAFGAVLDTIS 290 (310)
Q Consensus 275 ~v~~~~~~G~~~~~~~ 290 (310)
.|.+++.+|.....+.
T Consensus 563 ~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 563 SISSIDVNGGNRKTIL 578 (699)
T ss_dssp EEEEECSSSSCCEEEC
T ss_pred eEEEEccCCCceEEEE
Confidence 7888888886555443
No 59
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.65 E-value=1.8e-14 Score=132.74 Aligned_cols=113 Identities=15% Similarity=0.105 Sum_probs=74.9
Q ss_pred CCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceEE-eeeecCCCCccccCCCccccCCCCCCceeeEEEecC---CC
Q 048181 32 KAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFTD-FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA---TR 106 (310)
Q Consensus 32 ~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~---~g 106 (310)
.+..|.+|+++++|+ +|+++. .|+|++++++++... +... + .........|+||++++. ++
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~~~~~~~-~------------~v~~~g~~g~~gia~~pdf~~~g 81 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLR-GGELRHWQAGKGLSAPLSGV-P------------DVWAHGQGGLLDVVLAPDFAQSR 81 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEET-TTEEEEEETTTEECCCCBSC-C------------CCCCSTTCSEEEEEECTTHHHHC
T ss_pred CCCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCceeeEecCC-c------------ccccCCCCCceeEEECCCCCCCC
Confidence 467899999999999 888875 699999998765421 2100 0 001122356899999843 79
Q ss_pred eEEEEeCC--------CcEEEEeCCCC-----eEEEeeccCCC--ccccCccceEEeCCCCeEEEEcC
Q 048181 107 QLYIADAY--------SGLLVVGPNGR-----LATQLATGAEG--QAFHFLDGLDVDQGTGVVYFTDA 159 (310)
Q Consensus 107 ~LyVad~~--------~gi~~id~~~~-----~~~~~~~~~~g--~~~~~pndvavd~~~G~lyvtd~ 159 (310)
.|||++.. ..|.+++.+.+ ..+.+...... ....++++|++++ +|.|||+..
T Consensus 82 ~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G 148 (353)
T 2g8s_A 82 RIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEEC
T ss_pred EEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEEC
Confidence 99999643 24888766432 22333333321 2345689999999 599999964
No 60
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.65 E-value=2.5e-14 Score=128.36 Aligned_cols=196 Identities=12% Similarity=0.094 Sum_probs=133.7
Q ss_pred EEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 25 TKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 25 ~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
+.+..+. ..|.++++|++|++|+++..+++|.+++++++.+.+.... . ......|+.++++ +
T Consensus 79 ~~~~~~~--~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~--------~-------~~~~~~~~~i~~d-~ 140 (305)
T 3dr2_A 79 DVLLDAT--AFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRY--------A-------GKRLNSPNDLIVA-R 140 (305)
T ss_dssp EEEEESC--SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEE--------T-------TEECSCCCCEEEC-T
T ss_pred EEEeCCC--CccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEecc--------C-------CCccCCCCCEEEC-C
Confidence 3444443 4699999999999888877778999999987665543110 0 1123568899998 7
Q ss_pred CCeEEEEeC------------------CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcc
Q 048181 105 TRQLYIADA------------------YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFR 166 (310)
Q Consensus 105 ~g~LyVad~------------------~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~ 166 (310)
+|+||++|. ..+|+++++++++.+.+. .+..||++++++++..||++|....
T Consensus 141 dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------~~~~p~gl~~spdg~~lyv~~~~~~---- 210 (305)
T 3dr2_A 141 DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------DLDHPNGLAFSPDEQTLYVSQTPEQ---- 210 (305)
T ss_dssp TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------EESSEEEEEECTTSSEEEEEECCC-----
T ss_pred CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe------cCCCCcceEEcCCCCEEEEEecCCc----
Confidence 999999863 135999999877766553 3467999999996335999987521
Q ss_pred ceeEeeeecCCCceEEEEcCCCCeE---EEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCC
Q 048181 167 TIVKLNITNDSTGRLLSYNPRSSQV---TVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQ 242 (310)
Q Consensus 167 ~~~~~~~~~~~~G~l~~~d~~~g~~---~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~ 242 (310)
...+++|++++.+++.+ +.+.. ....|+||+++++|+ ||++. .+.|++|+.++. ......++
T Consensus 211 --------~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~---~~~~~~~~ 276 (305)
T 3dr2_A 211 --------GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQ---LLGHIPTP 276 (305)
T ss_dssp ----------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSC---EEEEEECS
T ss_pred --------CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCC---EEEEEECC
Confidence 01135677777543322 12221 235799999999998 99987 456999987543 12123344
Q ss_pred CCCceeeeCCCCCC-cEEEEEec
Q 048181 243 AKPHNIKRNPGLLQ-TFWEAAII 264 (310)
Q Consensus 243 g~Pdgl~~d~~~dG-~l~va~~~ 264 (310)
..|.++++++ +| .||++...
T Consensus 277 ~~~~~~~f~~--d~~~L~it~~~ 297 (305)
T 3dr2_A 277 GTASNCTFDQ--AQQRLFITGGP 297 (305)
T ss_dssp SCCCEEEECT--TSCEEEEEETT
T ss_pred CceeEEEEeC--CCCEEEEEcCC
Confidence 4689999987 76 69998764
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=2.1e-13 Score=122.99 Aligned_cols=190 Identities=11% Similarity=0.124 Sum_probs=135.9
Q ss_pred CcceEEEccCCCEEEEEe--CCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe
Q 048181 35 GGESIAFEPVGGAFYTGV--ADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~--~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad 112 (310)
.|.+++++++|+.+|+.. .+++|+.++...+...... ......|.++++++.+..||+++
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~------------------~~~~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI------------------QNTGKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE------------------CCCCTTCCCCEEETTTTEEEEEC
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe------------------cCCCCccceEEECCCCCEEEEEc
Confidence 388999999988555544 4788999998754332110 01233588999985555689888
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
....|..+|..+++...........+...++++++++++..+|+++.. ++.|+.+|..+++..
T Consensus 204 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 204 ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----------------AAEVLVVDTRNGNIL 266 (353)
T ss_dssp TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----------------SSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEE
Confidence 766799999988776433322122234567899999964568998754 368999999877765
Q ss_pred EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCc-EEEEEecC
Q 048181 193 VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQT-FWEAAIIT 265 (310)
Q Consensus 193 ~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~-l~va~~~~ 265 (310)
.... ...|.+++++|||++||++....+.|..++... ++... ...+..|.++++++ ||+ ||++....
T Consensus 267 ~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~ 335 (353)
T 3vgz_A 267 AKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFDTPTHPNSLALSA--DGKTLYVSVKQK 335 (353)
T ss_dssp EEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEEEECCSEEEEEEECT--TSCEEEEEEECC
T ss_pred EEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEecCCCCCeEEEcC--CCCEEEEEEccc
Confidence 4443 345789999999999999999999999998753 32221 33445699999999 997 89998774
No 62
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=3.5e-14 Score=126.51 Aligned_cols=194 Identities=16% Similarity=0.185 Sum_probs=134.5
Q ss_pred CCcceEEEccC-CCEEEEEeCCCeEEEEECCCceEEe-eeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 34 FGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFTDF-AFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
..|.+++++++ |++|+++. .++|++++++++...+ .... .......|.++++| ++|+||++
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~g~~~~~~~~~~---------------~~~~~~~~~~i~~d-~~g~l~v~ 133 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTDGTFEEIAKKDS---------------EGRRMQGCNDCAFD-YEGNLWIT 133 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETTSCEEECCSBCT---------------TSCBCBCCCEEEEC-TTSCEEEE
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCCCCEEEEEeccC---------------CCccccCCcCEEEC-CCCCEEEE
Confidence 46899999999 88777665 4589999988544432 2100 00123468899998 78999999
Q ss_pred eCC----------------CcEEEEeCCCCeEEEeeccCCCccccCccceEEe----CCCC-eEEEEcCCCccCccceeE
Q 048181 112 DAY----------------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVD----QGTG-VVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 112 d~~----------------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd----~~~G-~lyvtd~~~~~~~~~~~~ 170 (310)
+.. .+|++++++ ++...+.. .+..|++++++ ++ | .+|+++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~~i~~~~~~d~d-g~~l~v~~~~~--------- 197 (314)
T 1pjx_A 134 APAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-----AFQFPNGIAVRHMNDGR-PYQLIVAETPT--------- 197 (314)
T ss_dssp ECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-----EESSEEEEEEEECTTSC-EEEEEEEETTT---------
T ss_pred ecCcccccccccccccCCCCeEEEECCC-CCEEEecc-----CCCCcceEEEecccCCC-CCEEEEEECCC---------
Confidence 864 359999987 55544432 24568999999 95 7 799998643
Q ss_pred eeeecCCCceEEEEcCC-CCeEE---Eee---cCC-CCCceeEEccCCCEEEEEecCCCeEEEEEec-CCCCCceeeecC
Q 048181 171 LNITNDSTGRLLSYNPR-SSQVT---VLL---RNL-TGPAGVAISVDSSFLLVSEFTGNRTLKYWLR-GPRANSFDIINF 241 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~-~g~~~---~~~---~~l-~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~-~~~~g~~~~~~l 241 (310)
++|+++|.+ +++.. .+. ... ..|++|+++++|+ ||+++...++|.+|+.+ +. ......+
T Consensus 198 --------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~---~~~~~~~ 265 (314)
T 1pjx_A 198 --------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQ---PKMRIRC 265 (314)
T ss_dssp --------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBS---CSEEEEC
T ss_pred --------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCc---EeEEEeC
Confidence 567777754 34321 111 111 5689999999996 99999889999999875 32 1111223
Q ss_pred C-CCCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEECCC
Q 048181 242 Q-AKPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 242 ~-g~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
+ ..|.++++++ +|+ ||++.... ..+.+++++
T Consensus 266 ~~~~~~~i~~~~--dg~~l~v~~~~~--------~~l~~~~~~ 298 (314)
T 1pjx_A 266 PFEKPSNLHFKP--QTKTIFVTEHEN--------NAVWKFEWQ 298 (314)
T ss_dssp SSSCEEEEEECT--TSSEEEEEETTT--------TEEEEEECS
T ss_pred CCCCceeEEECC--CCCEEEEEeCCC--------CeEEEEeCC
Confidence 3 5689999999 998 99998764 267788764
No 63
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.61 E-value=3.1e-13 Score=122.74 Aligned_cols=183 Identities=10% Similarity=0.040 Sum_probs=132.3
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
..|++++++ ++.+|++...++.|..+++..... .+ +....|.+|+++ .+|+|||+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i---------------------~~~~~p~~i~~~-~~g~lyv~ 100 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI---------------------TGFTSPRYIHFL-SDEKAYVT 100 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE---------------------ECCSSEEEEEEE-ETTEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc---------------------CCCCCCcEEEEe-CCCeEEEE
Confidence 358999986 467788888789999999884322 22 124579999996 56799999
Q ss_pred e-CCCcEEEEeCCCCeEEEeeccCC-CccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 112 D-AYSGLLVVGPNGRLATQLATGAE-GQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 112 d-~~~gi~~id~~~~~~~~~~~~~~-g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
+ ....|.++|++++++........ ......|++++++ ++++|+++... +++|.++|+.++
T Consensus 101 ~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~----------------~~~v~viD~~t~ 162 (328)
T 3dsm_A 101 QIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSY----------------QNRILKIDTETD 162 (328)
T ss_dssp EBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTT----------------CCEEEEEETTTT
T ss_pred ECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCC----------------CCEEEEEECCCC
Confidence 9 45569999999887643222211 1234478999994 59999998531 368999999888
Q ss_pred eEEEeecCCCCCceeEEccCCCEEEEEecCC----------CeEEEEEecCCCCCceee-ecCC--CCCceeeeCCCCCC
Q 048181 190 QVTVLLRNLTGPAGVAISVDSSFLLVSEFTG----------NRTLKYWLRGPRANSFDI-INFQ--AKPHNIKRNPGLLQ 256 (310)
Q Consensus 190 ~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~----------~~I~~~~~~~~~~g~~~~-~~l~--g~Pdgl~~d~~~dG 256 (310)
++...+.....|++|++++||+ +|++.... ++|++++... ++..- ..++ ..|.+|++++ +|
T Consensus 163 ~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~g~~p~~la~~~--d~ 236 (328)
T 3dsm_A 163 KVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKLGDWPSEVQLNG--TR 236 (328)
T ss_dssp EEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCTTCCCEEEEECT--TS
T ss_pred eEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecCCCCCceeEEEec--CC
Confidence 8766555556899999999997 88887765 7999998753 33321 2332 3699999998 76
Q ss_pred -cEEEEEe
Q 048181 257 -TFWEAAI 263 (310)
Q Consensus 257 -~l~va~~ 263 (310)
.||++..
T Consensus 237 ~~lyv~~~ 244 (328)
T 3dsm_A 237 DTLYWINN 244 (328)
T ss_dssp CEEEEESS
T ss_pred CEEEEEcc
Confidence 5788754
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=6e-13 Score=120.60 Aligned_cols=227 Identities=13% Similarity=0.075 Sum_probs=140.1
Q ss_pred CCCcceEEEccCCCEEEEEe-CCCeEEEEEC--CCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 33 AFGGESIAFEPVGGAFYTGV-ADGRILKYQA--PDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~-~~g~I~r~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
...|.+++++++|+.+|+.. .++.|..++. ++....+..... .+.. .........|.+++++ ++|++|
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~-------~~~~-p~~~~~~~~~~~~~~s-pdg~l~ 155 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH-------SGHG-PRPEQDGSHIHYTDLT-PDNRLA 155 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC-------CCCC-SSTTCSSCCEEEEEEC-TTSCEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec-------CCCC-CCccccCCCceEEEEC-CCCcEE
Confidence 35799999999998555554 6777777764 344333221100 0000 0001123468899997 677899
Q ss_pred EEeCCCc-EEEEeCC-CCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 110 IADAYSG-LLVVGPN-GRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 110 Vad~~~g-i~~id~~-~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
+++...+ |..++.+ +++...+... ....-..|++++++|+ |+ +|+++.... .-.+|.++.
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spd-g~~l~v~~~~~~---------------~v~v~~~~~ 218 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPD-GQYAFLAGELSS---------------QIASLKYDT 218 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTT-SSEEEEEETTTT---------------EEEEEEEET
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCC-CCEEEEEeCCCC---------------EEEEEEecC
Confidence 9987654 7777766 4554433211 1112235789999995 76 899875431 113455555
Q ss_pred CCCeEEEeec--CC-------CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecC---CCCCceeeeCCC
Q 048181 187 RSSQVTVLLR--NL-------TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INF---QAKPHNIKRNPG 253 (310)
Q Consensus 187 ~~g~~~~~~~--~l-------~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l---~g~Pdgl~~d~~ 253 (310)
.+++.+.+.. .. ..|.+++|+|||++||++....++|..|+++.. |..+. ..+ ...|.++++++
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~sp- 295 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTLIQQISTEGDFPRDFDLDP- 295 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEEEEEEECSSSCCCEEEECT-
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEEeEEEecCCCCcCeEEECC-
Confidence 4465443221 11 347789999999999999999999999998632 33333 222 23699999999
Q ss_pred CCCc-EEEEEecCCCCCCCCceeeEEECCC-CcEE---EEEecCCCc
Q 048181 254 LLQT-FWEAAIITRQPAGTPVPIGQRISAF-GAVL---DTISFEAQY 295 (310)
Q Consensus 254 ~dG~-l~va~~~~~~~~~~~~~~v~~~~~~-G~~~---~~~~~p~~~ 295 (310)
||+ ||++....+ .-.+.++|++ |++. ..+.+|.+.
T Consensus 296 -dg~~l~v~~~~~~------~v~v~~~d~~tg~l~~~~~~~~~p~p~ 335 (347)
T 3hfq_A 296 -TEAFVVVVNQNTD------NATLYARDLTSGKLSLLQKDVTVPEGV 335 (347)
T ss_dssp -TSSEEEEEETTTT------EEEEEEECTTTCCEEEEEEEEECTTEE
T ss_pred -CCCEEEEEEcCCC------cEEEEEEeCCCCeEEecccceecCCCc
Confidence 996 788877643 1245566864 7766 456677663
No 65
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=1.5e-13 Score=124.56 Aligned_cols=195 Identities=13% Similarity=0.088 Sum_probs=125.3
Q ss_pred CCCCcceEEEccCCCEEEEEeC--CCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-e
Q 048181 32 KAFGGESIAFEPVGGAFYTGVA--DGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-Q 107 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~--~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~ 107 (310)
....|.+++++++|++|+++.. +++|+.++.+++. +.+... ......|.+++++ ++| .
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~-----------------~~~~~~p~~~a~s-pdg~~ 99 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTV-----------------VAPGTPPAYVAVD-EARQL 99 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEE-----------------EEESCCCSEEEEE-TTTTE
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeee-----------------ecCCCCCEEEEEC-CCCCE
Confidence 3468999999999996666653 5788888765432 222210 0123578899998 555 5
Q ss_pred EEEEeCCCc-EEEEeCC-CCeEEEeecc-CCC------ccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 108 LYIADAYSG-LLVVGPN-GRLATQLATG-AEG------QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 108 LyVad~~~g-i~~id~~-~~~~~~~~~~-~~g------~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
||+++...+ +..++.+ ++..+.+... ..+ .....++.++++|+ |++|+++...
T Consensus 100 l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~----------------- 161 (347)
T 3hfq_A 100 VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGS----------------- 161 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTT-----------------
T ss_pred EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCC-----------------
Confidence 888885544 5556553 3344333211 111 12345778999995 8899998643
Q ss_pred ceEEEEcCC-CCeEEEee----cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee----ecCC------C
Q 048181 179 GRLLSYNPR-SSQVTVLL----RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI----INFQ------A 243 (310)
Q Consensus 179 G~l~~~d~~-~g~~~~~~----~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~----~~l~------g 243 (310)
++++.|+.+ ++++.... ..-..|++++|+|||++||+++...++|..|+++.. .+..+. ...+ .
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCC
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCC
Confidence 455555544 45544322 223468899999999999999999999999988742 233322 2222 2
Q ss_pred CCceeeeCCCCCCc-EEEEEecC
Q 048181 244 KPHNIKRNPGLLQT-FWEAAIIT 265 (310)
Q Consensus 244 ~Pdgl~~d~~~dG~-l~va~~~~ 265 (310)
.|.++++++ ||+ ||++....
T Consensus 241 ~~~~i~~sp--dG~~l~v~~~~~ 261 (347)
T 3hfq_A 241 GAAAIRLSH--DGHFLYVSNRGY 261 (347)
T ss_dssp EEEEEEECT--TSCEEEEEEETT
T ss_pred cceeEEECC--CCCEEEEEeCCC
Confidence 377899999 996 78887643
No 66
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=1.7e-13 Score=122.45 Aligned_cols=191 Identities=12% Similarity=0.153 Sum_probs=130.1
Q ss_pred EEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec
Q 048181 25 TKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY 103 (310)
Q Consensus 25 ~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~ 103 (310)
+.+..+ ..|.+++++++|++|++ . +++|++++++++ .+.+.... ......+|+++++|
T Consensus 48 ~~~~~~---~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~---------------~~~~~~~~~di~~d- 106 (297)
T 3g4e_A 48 QRVTMD---APVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVD---------------NDKKNNRFNDGKVD- 106 (297)
T ss_dssp EEEECS---SCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECC---------------TTCSSEEEEEEEEC-
T ss_pred EEEeCC---CceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecC---------------CCCCCCCCCCEEEC-
Confidence 344455 36899999999995554 4 678999998754 44433110 01234578999998
Q ss_pred CCCeEEEEeCC------------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEe
Q 048181 104 ATRQLYIADAY------------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKL 171 (310)
Q Consensus 104 ~~g~LyVad~~------------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~ 171 (310)
++|++|+++.. .+|+++++++ +...+.. .+..||++++++++..+|++|+..
T Consensus 107 ~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~-----~~~~pngi~~spdg~~lyv~~~~~---------- 170 (297)
T 3g4e_A 107 PAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD-----QVDISNGLDWSLDHKIFYYIDSLS---------- 170 (297)
T ss_dssp TTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE-----EESBEEEEEECTTSCEEEEEEGGG----------
T ss_pred CCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee-----ccccccceEEcCCCCEEEEecCCC----------
Confidence 78999998631 2499999874 4443332 356799999999633699998753
Q ss_pred eeecCCCceEEEEcC--CCCeEE---Eee---cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCC
Q 048181 172 NITNDSTGRLLSYNP--RSSQVT---VLL---RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQ 242 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~--~~g~~~---~~~---~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~ 242 (310)
++|++++. .+|.+. .+. .....|+||+++++|+ ||++....++|++|+.+. |+... ..+|
T Consensus 171 -------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~t---G~~~~~i~~p 239 (297)
T 3g4e_A 171 -------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVT---GKRLQTVKLP 239 (297)
T ss_dssp -------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTT---CCEEEEEECS
T ss_pred -------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCC---ceEEEEEECC
Confidence 56777653 455442 222 1235799999999996 999999999999998752 33221 3344
Q ss_pred -CCCceeeeC-CCCCC-cEEEEEecC
Q 048181 243 -AKPHNIKRN-PGLLQ-TFWEAAIIT 265 (310)
Q Consensus 243 -g~Pdgl~~d-~~~dG-~l~va~~~~ 265 (310)
..|.++++. + ++ .|||+....
T Consensus 240 ~~~~t~~~f~g~--d~~~L~vt~~~~ 263 (297)
T 3g4e_A 240 VDKTTSCCFGGK--NYSEMYVTCARD 263 (297)
T ss_dssp SSBEEEEEEESG--GGCEEEEEEBCT
T ss_pred CCCceEEEEeCC--CCCEEEEEcCCc
Confidence 468899996 4 55 699998764
No 67
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.59 E-value=1.5e-13 Score=126.66 Aligned_cols=203 Identities=14% Similarity=0.147 Sum_probs=124.3
Q ss_pred CCCCcceEEEccC----CCEEEEEeC---C----CeEEEEECCCc------eEEeeeecCCCCccccCCCccccCCCCCC
Q 048181 32 KAFGGESIAFEPV----GGAFYTGVA---D----GRILKYQAPDG------FTDFAFTTPTRSKAVCDGTTNLDLGPICR 94 (310)
Q Consensus 32 ~~~~Pegia~d~~----G~l~~~d~~---~----g~I~r~~~~g~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 94 (310)
...+|.||+++++ |.||++... + ++|.|++.++. .+++...- . .....
T Consensus 71 g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~--------------~-~~~~h 135 (354)
T 3a9g_A 71 GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGI--------------P-GAYIH 135 (354)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEE--------------E-CCSSC
T ss_pred CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcC--------------C-CCCCc
Confidence 4568999999997 677766653 3 78999987643 12211000 0 11234
Q ss_pred ceeeEEEecCCCeEEEEeCC--------------CcEEEEeCCCC--------eEEEeeccCCCccccCccceEEeCCCC
Q 048181 95 RTFGLALHYATRQLYIADAY--------------SGLLVVGPNGR--------LATQLATGAEGQAFHFLDGLDVDQGTG 152 (310)
Q Consensus 95 ~P~Gla~d~~~g~LyVad~~--------------~gi~~id~~~~--------~~~~~~~~~~g~~~~~pndvavd~~~G 152 (310)
.+.+|+++ ++|+|||+... ..|+++++++. ..+.++ ..+..|+++++|+++|
T Consensus 136 ~~~~l~~~-pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-----~G~rnp~Gla~d~~~g 209 (354)
T 3a9g_A 136 NGGRIRFG-PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWS-----YGHRNPQGIDWHRASG 209 (354)
T ss_dssp CCCCEEEC-TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-----ECCSCCCEEEECTTTC
T ss_pred CCceEEEC-CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-----EccCCcceEEEeCCCC
Confidence 67899998 79999998642 13999998763 112222 1356799999999559
Q ss_pred eEEEEcCCCccCccceeEeeeecCCCceEEEEc------CCCCeEEE--ee-cCCCCCceeEE-------ccCCCEEEEE
Q 048181 153 VVYFTDASGVYDFRTIVKLNITNDSTGRLLSYN------PRSSQVTV--LL-RNLTGPAGVAI-------SVDSSFLLVS 216 (310)
Q Consensus 153 ~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d------~~~g~~~~--~~-~~l~~pnGIa~-------~~dg~~Lyv~ 216 (310)
+||++|...... +.+..+ . .|.-|-+. ...+.... .. .....|.|+++ ..+| .|||+
T Consensus 210 ~l~v~d~g~~~~--dei~~i-~---~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~ 282 (354)
T 3a9g_A 210 VMVATEHGPVGH--DEVNII-L---KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIA 282 (354)
T ss_dssp CEEEEECCSSSC--CEEEEE-C---TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEE
T ss_pred CEEEEecCCCCC--cEEEEe-c---CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEE
Confidence 999999764210 000000 0 01111000 00010011 11 22346899999 3566 59999
Q ss_pred ecCCCeEEEEEecCCC-CCce-ee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 217 EFTGNRTLKYWLRGPR-ANSF-DI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 217 d~~~~~I~~~~~~~~~-~g~~-~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
+...++|+++++++.. .... ++ .+..+.|.++++++ ||.||++...
T Consensus 283 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p--DG~lyv~~~~ 331 (354)
T 3a9g_A 283 CLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDD--DGGILISTSN 331 (354)
T ss_dssp ETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECT--TSCEEEEECT
T ss_pred EcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECC--CCcEEEEEeC
Confidence 9999999999997531 1111 12 23345799999999 9999999874
No 68
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.58 E-value=8.4e-14 Score=128.25 Aligned_cols=202 Identities=12% Similarity=0.111 Sum_probs=125.2
Q ss_pred CCCCcceEEEccC----CCEEEEEeCC-----CeEEEEECCCc-e---EEeeeecCCCCccccCCCccccCCCCCCceee
Q 048181 32 KAFGGESIAFEPV----GGAFYTGVAD-----GRILKYQAPDG-F---TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFG 98 (310)
Q Consensus 32 ~~~~Pegia~d~~----G~l~~~d~~~-----g~I~r~~~~g~-~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~G 98 (310)
...+|.||+++++ +.+|+++..+ ++|.|++.++. . +.+....+ ........|.+
T Consensus 73 g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p-------------~~~~~~h~~~~ 139 (352)
T 2ism_A 73 GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIP-------------ARPHGLHSGGR 139 (352)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEEC-------------CCTTCCCCCCC
T ss_pred CCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCC-------------CCCCCCcCCce
Confidence 4578999999997 6777776643 78999987643 1 12211000 00012346789
Q ss_pred EEEecCCCeEEEEeCC--------------CcEEEEeCCCC-------------eEEEeeccCCCccccCccceEEeCCC
Q 048181 99 LALHYATRQLYIADAY--------------SGLLVVGPNGR-------------LATQLATGAEGQAFHFLDGLDVDQGT 151 (310)
Q Consensus 99 la~d~~~g~LyVad~~--------------~gi~~id~~~~-------------~~~~~~~~~~g~~~~~pndvavd~~~ 151 (310)
|+++ ++|.|||++.. ..|+++++++. ..+.++ ..+..|+++++|+++
T Consensus 140 l~~~-pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-----~G~rnp~g~a~d~~~ 213 (352)
T 2ism_A 140 IAFG-PDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-----LGHRNPQGLAWHPKT 213 (352)
T ss_dssp EEEC-TTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-----ECCSEECCCEECTTT
T ss_pred EEEC-CCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-----EcCCCcccEEEECCC
Confidence 9998 78999999642 13999998751 111111 135679999999956
Q ss_pred CeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC--------------C--eEEEeecCCCCCceeEEccCCCEEEE
Q 048181 152 GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS--------------S--QVTVLLRNLTGPAGVAISVDSSFLLV 215 (310)
Q Consensus 152 G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~--------------g--~~~~~~~~l~~pnGIa~~~dg~~Lyv 215 (310)
|+||++|...... .+ .+...|.++.+.. + ...........|.||++. +| .||+
T Consensus 214 g~l~v~d~g~~~~-~~--------~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~-~G-~l~v 282 (352)
T 2ism_A 214 GELFSSEHGPSGE-QG--------YGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF-RG-DLYV 282 (352)
T ss_dssp CCEEEEEECC---------------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE-TT-EEEE
T ss_pred CCEEEEEcCCCCC-CC--------CCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE-CC-EEEE
Confidence 9999999754210 00 0011233332211 0 011111233468999994 56 5999
Q ss_pred EecCCCeEEEEEecCCCC----Ccee-eecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 216 SEFTGNRTLKYWLRGPRA----NSFD-IINFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 216 ~d~~~~~I~~~~~~~~~~----g~~~-~~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
++...++|+++++++... +..+ +..-.+.|.++++++ ||.||++....
T Consensus 283 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p--dG~lyv~~~~~ 335 (352)
T 2ism_A 283 AGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGP--DGALYVTTSNR 335 (352)
T ss_dssp EETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECT--TSCEEEEECST
T ss_pred EECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECC--CCcEEEEEeCC
Confidence 999999999999875421 1111 122236799999999 99999998764
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=2.5e-12 Score=114.28 Aligned_cols=226 Identities=11% Similarity=0.046 Sum_probs=153.9
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
..+.+++++++|++|+ ..+++|+.++++|+. .+.... .......+..+. .+|+++|++.
T Consensus 37 ~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~-~W~~~~-----------------~~~~~~~~~~~~-~dG~~lv~~~ 95 (276)
T 3no2_A 37 WECNSVAATKAGEILF--SYSKGAKMITRDGRE-LWNIAA-----------------PAGCEMQTARIL-PDGNALVAWC 95 (276)
T ss_dssp CCCCEEEECTTSCEEE--ECBSEEEEECTTSCE-EEEEEC-----------------CTTCEEEEEEEC-TTSCEEEEEE
T ss_pred CCCcCeEECCCCCEEE--eCCCCEEEECCCCCE-EEEEcC-----------------CCCccccccEEC-CCCCEEEEec
Confidence 3688999999999777 347889999997653 232110 111234566774 7899999876
Q ss_pred C-C-cEEEEeCCCCeEEEeeccCC-CccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 114 Y-S-GLLVVGPNGRLATQLATGAE-GQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 114 ~-~-gi~~id~~~~~~~~~~~~~~-g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
. . .++.+++++..+..+.-... ..+...+.++++++ +|++++++.. +++|+.+|++ |+
T Consensus 96 ~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~-----------------~~~v~~~d~~-G~ 156 (276)
T 3no2_A 96 GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFA-----------------TSEVREIAPN-GQ 156 (276)
T ss_dssp STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETT-----------------TTEEEEECTT-SC
T ss_pred CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecC-----------------CCEEEEECCC-CC
Confidence 5 4 48889987755544421111 12445688999999 5999999864 3789999987 76
Q ss_pred EEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec-CCCCCceee--ecCC----CCCceeeeCCCCCCcEEEEEe
Q 048181 191 VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR-GPRANSFDI--INFQ----AKPHNIKRNPGLLQTFWEAAI 263 (310)
Q Consensus 191 ~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~-~~~~g~~~~--~~l~----g~Pdgl~~d~~~dG~l~va~~ 263 (310)
..-....-..|.++++.++|+ ++|++..+++|+.++.+ |.. ..++ ..++ ..|.++.+.+ +|++|++.+
T Consensus 157 ~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~~~~--~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLFPLQ--NGGLYICNW 231 (276)
T ss_dssp EEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEEECT--TSCEEEEEE
T ss_pred EEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcE--EEEecCCCCCCccccccccceEcC--CCCEEEEec
Confidence 544333335788999999997 77888888999999876 321 1122 1222 2489999999 999999997
Q ss_pred cCCCC--CCCCceeeEEECCCCcEEEEEecCCCccccceeEEEec
Q 048181 264 ITRQP--AGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPF 306 (310)
Q Consensus 264 ~~~~~--~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~ 306 (310)
.+... .....++++.+|++|+++=.+.....+ .++|+|+..
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~--~~~~~~~~~ 274 (276)
T 3no2_A 232 QGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKF--GMISTICPI 274 (276)
T ss_dssp CTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTS--CCCCEEEEE
T ss_pred cCccccccccCCceEEEECCCCCEEEEecCcccc--cceeeeeec
Confidence 43100 000024799999999998887776554 578877654
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=2.6e-13 Score=122.24 Aligned_cols=199 Identities=16% Similarity=0.204 Sum_probs=135.0
Q ss_pred CCcceEEEccCCCEEEEEeCC----CeEEEEECCCceEE-eeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 34 FGGESIAFEPVGGAFYTGVAD----GRILKYQAPDGFTD-FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~----g~I~r~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
..|.+++++++|++|+++..+ ++|++++++++... +... ......|.+++++ ++|++
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~-----------------~~~~~~~~~i~~d-~~g~l 148 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED-----------------LSTAYCIDDMVFD-SKGGF 148 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-----------------SSSCCCEEEEEEC-TTSCE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-----------------CccCCcccceEEC-CCCCE
Confidence 469999999999988887665 68999998865322 2100 0123478899998 68999
Q ss_pred EEEeCC-------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEeeeecCCCce
Q 048181 109 YIADAY-------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKLNITNDSTGR 180 (310)
Q Consensus 109 yVad~~-------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~~~~~~~~G~ 180 (310)
|+++.. .+|+++++++++...+.. .+..|++++++++ | .+|+++... ++
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~i~~~~d-g~~l~v~~~~~-----------------~~ 205 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-----NISVANGIALSTD-EKVLWVTETTA-----------------NR 205 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTSCCEEEEEE-----EESSEEEEEECTT-SSEEEEEEGGG-----------------TE
T ss_pred EEEeccccccCCCceEEEEeCCCCEEEEeec-----CCCcccceEECCC-CCEEEEEeCCC-----------------Ce
Confidence 998763 359999988766655432 2456899999995 6 599987532 56
Q ss_pred EEEEcCCC-C-eEEEe-----e--cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCC-------C
Q 048181 181 LLSYNPRS-S-QVTVL-----L--RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQA-------K 244 (310)
Q Consensus 181 l~~~d~~~-g-~~~~~-----~--~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g-------~ 244 (310)
|+++|.++ + ..+.+ . .+...|++|+++++|+ ||++....++|++|+.++. .......+. .
T Consensus 206 i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~---~~~~~~~~~~~~g~~~~ 281 (333)
T 2dg1_A 206 LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY---PIGQILIPGRDEGHMLR 281 (333)
T ss_dssp EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC---EEEEEECTTGGGTCSCB
T ss_pred EEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCC---EEEEEEcCCCccccccC
Confidence 77777642 2 22211 1 1224789999999997 9999988899999987532 121122221 5
Q ss_pred CceeeeCCCCCC-cEEEEEecCCCCCCCCceeeEEECCC
Q 048181 245 PHNIKRNPGLLQ-TFWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 245 Pdgl~~d~~~dG-~l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
|.++++++ || .||++...... ...+.+.+++.+
T Consensus 282 ~~~~~~~~--dg~~L~v~~~~g~~---~~~~~l~~~~~~ 315 (333)
T 2dg1_A 282 STHPQFIP--GTNQLIICSNDIEM---GGGSMLYTVNGF 315 (333)
T ss_dssp CCEEEECT--TSCEEEEEEECGGG---TCCEEEEEEECS
T ss_pred cceEEECC--CCCEEEEEeCccCC---CCCceEEEEecc
Confidence 89999998 86 79998776310 011356666654
No 71
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.54 E-value=9.4e-12 Score=109.91 Aligned_cols=199 Identities=9% Similarity=0.058 Sum_probs=132.7
Q ss_pred eeecceEEEeCCCCCCCcceEEEccCCCEEEEEe--CCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCce
Q 048181 19 FSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGV--ADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRT 96 (310)
Q Consensus 19 ~~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~--~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P 96 (310)
.....+++++.+.. .+|+|++++++|.||++.- ..++|++++...+...-.. . ......+
T Consensus 7 ~~~~vv~~~p~~~~-~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i----------------~-l~~~~fg 68 (266)
T 2iwa_A 7 YIVEVLNEFPHDPY-AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIH----------------K-MDDSYFG 68 (266)
T ss_dssp EEEEEEEEEECCTT-CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEE----------------E-CCTTCCE
T ss_pred cCceEEEEEECCCC-CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEE----------------e-cCCCcce
Confidence 34567788888743 4689999999887665543 3689999999854321110 0 0122345
Q ss_pred eeEEEecCCCeEEEEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeec
Q 048181 97 FGLALHYATRQLYIADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 97 ~Gla~d~~~g~LyVad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
.|++++ +++||+++...+ ++++|+++.+...-.. . + .|.+..+.++++++|++|.
T Consensus 69 eGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~-~-g----~~~g~glt~Dg~~l~vs~g---------------- 124 (266)
T 2iwa_A 69 EGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFT-H-Q----MKDGWGLATDGKILYGSDG---------------- 124 (266)
T ss_dssp EEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEE-C-C----SSSCCEEEECSSSEEEECS----------------
T ss_pred EEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEE-C-C----CCCeEEEEECCCEEEEECC----------------
Confidence 688886 679999987654 9999998865432111 1 1 1345555655678999983
Q ss_pred CCCceEEEEcCCCCeEEEeec------CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCC-CceeeecC-------
Q 048181 176 DSTGRLLSYNPRSSQVTVLLR------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRA-NSFDIINF------- 241 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~~------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~-g~~~~~~l------- 241 (310)
+++|+.+|+.+.++...+. .+..||++.+. || .||++....+.|.++|+...+. +...+.++
T Consensus 125 --s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~ 200 (266)
T 2iwa_A 125 --TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDE 200 (266)
T ss_dssp --SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHT
T ss_pred --CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccc
Confidence 2689999998866543221 34579999998 77 6999999999999999864211 11111111
Q ss_pred --C--CCCceeeeCCCCCC-cEEEEEecC
Q 048181 242 --Q--AKPHNIKRNPGLLQ-TFWEAAIIT 265 (310)
Q Consensus 242 --~--g~Pdgl~~d~~~dG-~l~va~~~~ 265 (310)
+ ..|.||++++ +| .+||+....
T Consensus 201 ~~~~~~v~nGIa~~~--~~~~lfVTgk~~ 227 (266)
T 2iwa_A 201 GFRDIDVLNGIAWDQ--ENKRIFVTGKLW 227 (266)
T ss_dssp TCTTCCCEEEEEEET--TTTEEEEEETTC
T ss_pred cccccCceEEEEEcC--CCCEEEEECCCC
Confidence 1 2578999998 77 699998654
No 72
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.52 E-value=8.9e-12 Score=109.42 Aligned_cols=209 Identities=11% Similarity=0.096 Sum_probs=136.9
Q ss_pred EeCCCCCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 27 ILFPPKAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 27 ~~~~~~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
-++|+-...+.|++++++++ ||.+...+++|++++.+++.. .+.. .....+-||+++ .
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l-------------------~g~~D~EGIa~~-~ 79 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL-------------------DFVKDLETIEYI-G 79 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC-------------------SSCSSEEEEEEC-S
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec-------------------CCCCChHHeEEe-C
Confidence 46777667899999998754 666678899999999996643 2211 223568899997 7
Q ss_pred CCeEEEEeCCC-cEEEEeCCC-CeEEEe--ec-cC-CCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 105 TRQLYIADAYS-GLLVVGPNG-RLATQL--AT-GA-EGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 105 ~g~LyVad~~~-gi~~id~~~-~~~~~~--~~-~~-~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
++++||++... +++.++... +.+..+ .. .. ....=....++|+|+++++||++.-.. .
T Consensus 80 ~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----------------p 143 (255)
T 3qqz_A 80 DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----------------P 143 (255)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----------------S
T ss_pred CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----------------C
Confidence 88888887554 466655332 222211 11 11 111112247999999766999975332 2
Q ss_pred ceEEEEcC--CCCeEEEeec-------CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCC------
Q 048181 179 GRLLSYNP--RSSQVTVLLR-------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQ------ 242 (310)
Q Consensus 179 G~l~~~d~--~~g~~~~~~~-------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~------ 242 (310)
..||.++. .+..++.... .+..+-+|+++|..++||+....+++|..++.+|.......+ .+..
T Consensus 144 ~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~ 223 (255)
T 3qqz_A 144 IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNI 223 (255)
T ss_dssp EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCC
T ss_pred ceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCccccc
Confidence 35777762 2223333311 345689999999999999999999999999987642221222 1211
Q ss_pred CCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCC
Q 048181 243 AKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 243 g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
.-|.||++|+ +|+|||+.-.+ ...+|.++
T Consensus 224 ~qpEGia~d~--~G~lyIvsE~n---------~~y~f~~~ 252 (255)
T 3qqz_A 224 KQAEGVAMDA--SGNIYIVSEPN---------RFYRFTPQ 252 (255)
T ss_dssp CSEEEEEECT--TCCEEEEETTT---------EEEEEEC-
T ss_pred CCCCeeEECC--CCCEEEEcCCc---------eEEEEEec
Confidence 2589999999 99999997665 67787764
No 73
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.51 E-value=2.9e-12 Score=113.21 Aligned_cols=166 Identities=14% Similarity=0.080 Sum_probs=121.2
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY 103 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~ 103 (310)
+++++++. -..+||++++ .+.+|++...++++..++.+.... +... .. . .+.+.||+.|
T Consensus 57 ~~~i~l~~-~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v-~~~i---------------~~-g-~~~g~glt~D- 115 (266)
T 2iwa_A 57 ENIHKMDD-SYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSN-IKNF---------------TH-Q-MKDGWGLATD- 115 (266)
T ss_dssp EEEEECCT-TCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEE-EEEE---------------EC-C-SSSCCEEEEC-
T ss_pred EEEEecCC-CcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcE-EEEE---------------EC-C-CCCeEEEEEC-
Confidence 45566664 3578999998 357888888899999999875322 2110 00 1 1345667764
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCeEE-EeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 104 ATRQLYIADAYSGLLVVGPNGRLAT-QLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 104 ~~g~LyVad~~~gi~~id~~~~~~~-~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
.++||+++..+.|..+|+++.++. .+.-...+.++.+||.+.+. +|.+|++... .+.|.
T Consensus 116 -g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~-----------------~~~V~ 175 (266)
T 2iwa_A 116 -GKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ-----------------TDCIA 175 (266)
T ss_dssp -SSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-----------------SSEEE
T ss_pred -CCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCC-----------------CCeEE
Confidence 788999996566999999986543 22222235677789999988 3899998754 25899
Q ss_pred EEcCCCCeEEEeec--CC------------CCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 183 SYNPRSSQVTVLLR--NL------------TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 183 ~~d~~~g~~~~~~~--~l------------~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
++|+.++++...++ ++ ..|||||++|+++.+||+....++|+.+++..
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999998765443 22 47899999999999999999999999999864
No 74
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.48 E-value=6.5e-12 Score=110.11 Aligned_cols=163 Identities=17% Similarity=0.191 Sum_probs=120.6
Q ss_pred ceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEE
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLA 100 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla 100 (310)
.+++++++.. ...||++++. +.+|.+.-.+++++.+|++... .++. ..+.+.|++
T Consensus 77 v~~~~~l~~~-~FgeGit~~g-~~ly~ltw~~~~v~v~D~~t~~~~~ti~---------------------~~~eG~glt 133 (262)
T 3nol_A 77 TLQQIELGKR-YFGEGISDWK-DKIVGLTWKNGLGFVWNIRNLRQVRSFN---------------------YDGEGWGLT 133 (262)
T ss_dssp EEEEEECCTT-CCEEEEEEET-TEEEEEESSSSEEEEEETTTCCEEEEEE---------------------CSSCCCCEE
T ss_pred EEEEEecCCc-cceeEEEEeC-CEEEEEEeeCCEEEEEECccCcEEEEEE---------------------CCCCceEEe
Confidence 3455677643 4579999873 4777777789999999987432 2222 123557888
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCCCeEEEeec-cCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCc
Q 048181 101 LHYATRQLYIADAYSGLLVVGPNGRLATQLAT-GAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTG 179 (310)
Q Consensus 101 ~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~-~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G 179 (310)
.| +++||++|....|..+|+++.++..-.. ...+.++..+|.+... +|+||++.... .
T Consensus 134 ~d--g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~-----------------~ 192 (262)
T 3nol_A 134 HN--DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQT-----------------N 192 (262)
T ss_dssp EC--SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS-----------------S
T ss_pred cC--CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccC-----------------C
Confidence 74 6899999976679999999866532222 2346788889999987 49999987542 5
Q ss_pred eEEEEcCCCCeEEEeecC-------------CCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 180 RLLSYNPRSSQVTVLLRN-------------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 180 ~l~~~d~~~g~~~~~~~~-------------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
.|+++|+.+|++...++- ...|||||++|+++.|||+-..=.+++.+.+.
T Consensus 193 ~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 193 KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 799999999988765431 23789999999999999998877788887764
No 75
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.48 E-value=4.7e-11 Score=106.47 Aligned_cols=234 Identities=12% Similarity=-0.002 Sum_probs=143.5
Q ss_pred eEEEeCCCCCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceEE--eeeecCCCCccccCCCccccCCCCCCceeeEE
Q 048181 24 FTKILFPPKAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFTD--FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLA 100 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla 100 (310)
++++.+++....|.+++++++|+ +|+++..+++|+.++..++... +.... .......|.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 88 (337)
T 1pby_B 24 DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST---------------PEERVKSLFGAA 88 (337)
T ss_dssp EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB---------------TTEEEECTTCEE
T ss_pred EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC---------------cccccccccceE
Confidence 44556664211499999999996 4556666789999998744321 21000 000112577899
Q ss_pred EecCCCeEEEEe------------CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCC-ccCccc
Q 048181 101 LHYATRQLYIAD------------AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASG-VYDFRT 167 (310)
Q Consensus 101 ~d~~~g~LyVad------------~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~-~~~~~~ 167 (310)
+++....||+++ ....|..+|.++++....... + ..|+++++++++..+|+++..- .+....
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~~~i~~~d~~~ 163 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLGRDLHVMDPEA 163 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEESSSEEEEETTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeCCeEEEEECCC
Confidence 974344788885 235699999988765432221 1 2478899999533488874210 011100
Q ss_pred e-eEeeee---------cCCCc----------------------------------eEEEEcCCCCeEEEe--ecCCCCC
Q 048181 168 I-VKLNIT---------NDSTG----------------------------------RLLSYNPRSSQVTVL--LRNLTGP 201 (310)
Q Consensus 168 ~-~~~~~~---------~~~~G----------------------------------~l~~~d~~~g~~~~~--~~~l~~p 201 (310)
. ....+. ..++| .|+.+|..++++... ......|
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 243 (337)
T 1pby_B 164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243 (337)
T ss_dssp TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCce
Confidence 0 000000 00111 467888887766421 1223468
Q ss_pred ceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEE
Q 048181 202 AGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRI 279 (310)
Q Consensus 202 nGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~ 279 (310)
++++++|||++||++ .++|++|++.. ++.. .......|.++++++ +|+ ||++... ..+..+
T Consensus 244 ~~~~~s~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~---------~~i~v~ 306 (337)
T 1pby_B 244 FSTAVNPAKTRAFGA---YNVLESFDLEK---NASIKRVPLPHSYYSVNVST--DGSTVWLGGAL---------GDLAAY 306 (337)
T ss_dssp EEEEECTTSSEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEECT--TSCEEEEESBS---------SEEEEE
T ss_pred eeEEECCCCCEEEEe---CCeEEEEECCC---CcCcceecCCCceeeEEECC--CCCEEEEEcCC---------CcEEEE
Confidence 899999999999998 48999998753 2221 133345699999999 996 7777443 368888
Q ss_pred CC-CCcEEEEEecCCC
Q 048181 280 SA-FGAVLDTISFEAQ 294 (310)
Q Consensus 280 ~~-~G~~~~~~~~p~~ 294 (310)
|. .|+++..+..+.+
T Consensus 307 d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 307 DAETLEKKGQVDLPGN 322 (337)
T ss_dssp ETTTCCEEEEEECGGG
T ss_pred ECcCCcEEEEEEcCCC
Confidence 95 6899999988854
No 76
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.47 E-value=1.2e-11 Score=107.42 Aligned_cols=164 Identities=15% Similarity=0.168 Sum_probs=122.4
Q ss_pred cceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeE
Q 048181 22 PTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGL 99 (310)
Q Consensus 22 ~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gl 99 (310)
..+++++++.. ..+||++++ ++++|.++-.+++++.++++... .++. ..+.+.||
T Consensus 54 kv~~~~~l~~~-~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~---------------------~~~~Gwgl 110 (243)
T 3mbr_X 54 RILQRAEVPPP-YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFR---------------------YPGEGWAL 110 (243)
T ss_dssp CEEEEEECCTT-CCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEE---------------------CSSCCCEE
T ss_pred CEEEEEeCCCC-cceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEe---------------------CCCCceEE
Confidence 34566777754 467999987 46788888889999999987532 2222 12356788
Q ss_pred EEecCCCeEEEEeCCCcEEEEeCCCCeEE-EeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 100 ALHYATRQLYIADAYSGLLVVGPNGRLAT-QLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 100 a~d~~~g~LyVad~~~gi~~id~~~~~~~-~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
+.| +++||++|....|..+|+++.++. .+.-...+.++.++|.+... +|+||+.....
T Consensus 111 t~d--g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s----------------- 169 (243)
T 3mbr_X 111 TSD--DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLT----------------- 169 (243)
T ss_dssp EEC--SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTT-----------------
T ss_pred eeC--CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCC-----------------
Confidence 874 789999998767999999986553 22222356678889999987 59999887542
Q ss_pred ceEEEEcCCCCeEEEeec--------------CCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 179 GRLLSYNPRSSQVTVLLR--------------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 179 G~l~~~d~~~g~~~~~~~--------------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
..|.++|+.+|++...++ ....+||||++|+++.|||+-..=.+++.+.+.
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 479999999998865543 123789999999999999998877888888764
No 77
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.46 E-value=1.3e-11 Score=108.22 Aligned_cols=162 Identities=15% Similarity=0.168 Sum_probs=119.9
Q ss_pred ceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEE
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLA 100 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla 100 (310)
.++++ ++.. ...||++++. +.+|.+.-.+++++.+|++.... ++. ..+.+.||+
T Consensus 87 v~~~~-l~~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~---------------------~~~eGwGLt 142 (268)
T 3nok_A 87 PVWME-RLGN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTR---------------------YSGEGWGLC 142 (268)
T ss_dssp CSEEE-ECTT-CCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEE---------------------CSSCCCCEE
T ss_pred EEeEE-CCCC-cceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEe---------------------CCCceeEEe
Confidence 34555 6643 4579999874 58888888899999999885322 222 123467899
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCCCeEEE-eeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCc
Q 048181 101 LHYATRQLYIADAYSGLLVVGPNGRLATQ-LATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTG 179 (310)
Q Consensus 101 ~d~~~g~LyVad~~~gi~~id~~~~~~~~-~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G 179 (310)
.| +++||++|....|..+|+++.++.. +.-...+.++.++|.+... +|+||++.... .
T Consensus 143 ~D--g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s-----------------~ 201 (268)
T 3nok_A 143 YW--NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHS-----------------S 201 (268)
T ss_dssp EE--TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTC-----------------S
T ss_pred cC--CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCC-----------------C
Confidence 86 6899999976679999999876532 2222356678889999988 48999987542 5
Q ss_pred eEEEEcCCCCeEEEeec--------------CCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 180 RLLSYNPRSSQVTVLLR--------------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 180 ~l~~~d~~~g~~~~~~~--------------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
.|.++|+.+|++...++ ....+||||++|+++.|||+-..=.+++.+.++
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 79999999998865543 113789999999999999998777788877663
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=4.8e-11 Score=106.84 Aligned_cols=186 Identities=10% Similarity=0.036 Sum_probs=120.3
Q ss_pred CCcceEEEccCCC-EEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceee-EEEecCCCe-EE
Q 048181 34 FGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFG-LALHYATRQ-LY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~G-la~d~~~g~-Ly 109 (310)
..| +++++++|+ +|+++..+++|+.++..++.. .... .....|.. ++++ ++|+ ||
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~s-~dg~~l~ 99 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-------------------QEGQSSMADVDIT-PDDQFAV 99 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-------------------EECSSCCCCEEEC-TTSSEEE
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-------------------ccCCCCccceEEC-CCCCEEE
Confidence 456 999999998 555566688999999875432 1110 12235666 9997 4554 66
Q ss_pred EEeCC-C--cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEeeeecCCC-ceEEEE
Q 048181 110 IADAY-S--GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKLNITNDST-GRLLSY 184 (310)
Q Consensus 110 Vad~~-~--gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~~~~~~~~-G~l~~~ 184 (310)
++... . .|..+|.++++....... ...|++++++|+ | .+|+++.... . -.+|.+
T Consensus 100 ~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~spd-g~~l~~~~~~~~---------------~~i~~~~~ 158 (331)
T 3u4y_A 100 TVTGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAISPN-GNGLILIDRSSA---------------NTVRRFKI 158 (331)
T ss_dssp ECCCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEECTT-SSCEEEEEETTT---------------TEEEEEEE
T ss_pred EecCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEECCC-CCEEEEEecCCC---------------ceEEEEEE
Confidence 43333 2 599999988765433221 134689999995 6 5999875421 0 124444
Q ss_pred cCCCCeE----EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCc-eeeecCCCCCceeeeCCCCCCc-E
Q 048181 185 NPRSSQV----TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANS-FDIINFQAKPHNIKRNPGLLQT-F 258 (310)
Q Consensus 185 d~~~g~~----~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~-~~~~~l~g~Pdgl~~d~~~dG~-l 258 (310)
+.+ +.+ .........|.+++++|||++||++....++|+.|++.....-. .........|.++++++ ||+ +
T Consensus 159 ~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l 235 (331)
T 3u4y_A 159 DAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSR--DGSTV 235 (331)
T ss_dssp CTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECT--TSSEE
T ss_pred CCC-CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECC--CCCEE
Confidence 432 222 11223345689999999999999999999999999986422100 11122335689999999 998 7
Q ss_pred EEEEec
Q 048181 259 WEAAII 264 (310)
Q Consensus 259 ~va~~~ 264 (310)
|++...
T Consensus 236 ~v~~~~ 241 (331)
T 3u4y_A 236 YVLTES 241 (331)
T ss_dssp EEECSS
T ss_pred EEEEcC
Confidence 888654
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.43 E-value=1e-10 Score=104.45 Aligned_cols=216 Identities=8% Similarity=0.015 Sum_probs=130.1
Q ss_pred CcceEEEccCCCEEEE-EeCCCeEEEEECC-Cce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 35 GGESIAFEPVGGAFYT-GVADGRILKYQAP-DGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~-d~~~g~I~r~~~~-g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
.|.+++|+++|+.+|+ +..++.|..++.+ +.. ..... ......|.++++++....||++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------------------~~~~~~~~~~~~s~dg~~l~~~ 146 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV------------------VEGLDGCHSANISPDNRTLWVP 146 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE------------------ECCCTTBCCCEECTTSSEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc------------------ccCCCCceEEEECCCCCEEEEe
Confidence 7999999999985554 4457888877762 211 11110 1223457889997434468888
Q ss_pred e-CCCcEEEEeCCC-CeEEEeec-cCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC--
Q 048181 112 D-AYSGLLVVGPNG-RLATQLAT-GAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP-- 186 (310)
Q Consensus 112 d-~~~gi~~id~~~-~~~~~~~~-~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~-- 186 (310)
+ ....|..++..+ ++...+.. .........|++++++|++..+|+++... +.+..++.
T Consensus 147 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-----------------~~i~~~~~~~ 209 (343)
T 1ri6_A 147 ALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-----------------SSVDVWELKD 209 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-----------------TEEEEEESSC
T ss_pred cCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-----------------CEEEEEEecC
Confidence 7 344588888765 55433210 01111124678999999633488887432 45555554
Q ss_pred CCCeEEEe--ec----C---CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---ecCCCCCceeeeCCCC
Q 048181 187 RSSQVTVL--LR----N---LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---INFQAKPHNIKRNPGL 254 (310)
Q Consensus 187 ~~g~~~~~--~~----~---l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~~l~g~Pdgl~~d~~~ 254 (310)
.+++.+.. .. . ...|.+++|+|||++||++....+.|..|+++.. .+..+. ....+.|.++++++
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~s~-- 286 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED-GSVLSKEGFQPTETQPRGFNVDH-- 286 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-SCCEEEEEEEECSSSCCCEEECT--
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC-CCceEEeeeecCCCccceEEECC--
Confidence 33443221 11 1 2345579999999999999988999999998731 233322 22234599999999
Q ss_pred CCc-EEEEEecCCCCCCCCceeeEEECCC-CcEEEEEecCCC
Q 048181 255 LQT-FWEAAIITRQPAGTPVPIGQRISAF-GAVLDTISFEAQ 294 (310)
Q Consensus 255 dG~-l~va~~~~~~~~~~~~~~v~~~~~~-G~~~~~~~~p~~ 294 (310)
+|+ ||++....+ .-.+.++|++ |+....-.++.+
T Consensus 287 dg~~l~~~~~~~~------~v~v~~~d~~~g~~~~~~~~~~g 322 (343)
T 1ri6_A 287 SGKYLIAAGQKSH------HISVYEIVGEQGLLHEKGRYAVG 322 (343)
T ss_dssp TSSEEEEECTTTC------EEEEEEEETTTTEEEEEEEEECS
T ss_pred CCCEEEEecCCCC------eEEEEEEcCCCceeeEccccccC
Confidence 997 777765432 1234555765 554444444444
No 80
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.42 E-value=3.4e-10 Score=103.62 Aligned_cols=204 Identities=15% Similarity=0.175 Sum_probs=141.3
Q ss_pred CcceEEEccCCCEE-EEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 35 GGESIAFEPVGGAF-YTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~-~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
.+.+++|+++|+.+ +++..++.|+.++...+...... .....+.++++++.+..||++..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~-------------------~~~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-------------------KTGKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-------------------ECSSSEEEEEECTTSSEEEEEET
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE-------------------eCCCCcceEEECCCCCEEEEEeC
Confidence 78899999999855 45556799999998855432111 12235789999743345777766
Q ss_pred CC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 114 YS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 114 ~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
.. .|..+|..+++....... + ..++++++++++..+|++... ++.|+.+|..+++..
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~~--~---~~~~~~~~~~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVSV--G---RSPKGIAVTPDGTKVYVANFD-----------------SMSISVIDTVTNSVI 193 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEEC--C---SSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCcEEEEEec--C---CCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCeEE
Confidence 54 488899887765433221 1 346899999964467777643 378999998888766
Q ss_pred EeecCCCCCceeEEccCCCEEEEEec--CCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCc-EEEEEecCCCC
Q 048181 193 VLLRNLTGPAGVAISVDSSFLLVSEF--TGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQT-FWEAAIITRQP 268 (310)
Q Consensus 193 ~~~~~l~~pnGIa~~~dg~~Lyv~d~--~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~-l~va~~~~~~~ 268 (310)
.....-..+++++++|+|++||++.. ..+.|+.+++.. +... .......|..+++++ +|+ ||++....
T Consensus 194 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~--dg~~l~~s~~~d--- 265 (391)
T 1l0q_A 194 DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT---NKITARIPVGPDPAGIAVTP--DGKKVYVALSFX--- 265 (391)
T ss_dssp EEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT---TEEEEEEECCSSEEEEEECT--TSSEEEEEETTT---
T ss_pred EEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC---CeEEEEEecCCCccEEEEcc--CCCEEEEEcCCC---
Confidence 55555567899999999999999886 788999998763 2221 122234578899999 995 77876544
Q ss_pred CCCCceeeEEECC-CCcEEEEEecC
Q 048181 269 AGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 269 ~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
..+..+|. .|+++..+...
T Consensus 266 -----~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 266 -----NTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp -----TEEEEEETTTTEEEEEEECS
T ss_pred -----CEEEEEECCCCcEEEEEECC
Confidence 26777885 57777776543
No 81
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.42 E-value=4.1e-12 Score=120.91 Aligned_cols=179 Identities=17% Similarity=0.170 Sum_probs=114.6
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECC-CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC---C
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAP-DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA---T 105 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~---~ 105 (310)
...+..|.+|+++++|++|+++...++|++++++ +....+...... .......+.++||++++. +
T Consensus 23 a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~-----------~~~~~g~~Gllgia~~Pdf~~~ 91 (454)
T 1cru_A 23 LSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEI-----------VNDADGQNGLLGFAFHPDFKNN 91 (454)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC-----------CCCTTSSCSEEEEEECTTTTTS
T ss_pred ECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcc-----------ccccCCCCceeEEEECCCcCcC
Confidence 3468899999999999988888766799999875 444443311000 000012356889999844 8
Q ss_pred CeEEEEeCC-------------CcEEEEeCCC--Ce---EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccC---
Q 048181 106 RQLYIADAY-------------SGLLVVGPNG--RL---ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYD--- 164 (310)
Q Consensus 106 g~LyVad~~-------------~gi~~id~~~--~~---~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~--- 164 (310)
+.|||+... ..|++++.+. +. .+++..........++++|++++ +|.|||+.......
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLA 170 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGG
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcc
Confidence 999998742 3588876542 22 23344333322345789999999 59999985432110
Q ss_pred ----ccc--ee------EeeeecCCCceEEEEcCCCC-----------eEEEeecCCCCCceeEEccCCCEEEEEecCCC
Q 048181 165 ----FRT--IV------KLNITNDSTGRLLSYNPRSS-----------QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGN 221 (310)
Q Consensus 165 ----~~~--~~------~~~~~~~~~G~l~~~d~~~g-----------~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~ 221 (310)
..+ .. ..--.....|+|+|++++.. ..+++..++..|.||+|+++|+ ||++|....
T Consensus 171 ~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~~ 249 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGPN 249 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECSS
T ss_pred ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCCC
Confidence 000 00 00000123689999999744 3466778899999999999875 999997543
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.40 E-value=2.3e-10 Score=104.06 Aligned_cols=193 Identities=11% Similarity=0.140 Sum_probs=119.5
Q ss_pred CCCCcceEEEccCCCEEEEEeC----CCeE--EEEECC-CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 32 KAFGGESIAFEPVGGAFYTGVA----DGRI--LKYQAP-DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~----~g~I--~r~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
....|.+++++++|+.+|+... +++| ++++.+ +..+.+... ......|..+++ .
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~-----------------~~~~~~p~~~~~--d 108 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ-----------------KTMGADPCYLTT--N 108 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE-----------------ECSSSCEEEEEE--C
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe-----------------ccCCCCcEEEEE--C
Confidence 3467999999999986666554 3676 456665 433333210 112347888988 4
Q ss_pred CCeEEEEeCCCc-EEEEeCCC-CeEEEee----ccCCC-----ccccCccceEEeCCCCe-EEEEcCCCccCccceeEee
Q 048181 105 TRQLYIADAYSG-LLVVGPNG-RLATQLA----TGAEG-----QAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 105 ~g~LyVad~~~g-i~~id~~~-~~~~~~~----~~~~g-----~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~ 172 (310)
+..||+++...+ +..++.+. +.+..+. ....+ +....+++++++|+ |+ +|+++....
T Consensus 109 g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~---------- 177 (361)
T 3scy_A 109 GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD-GKYLLADDLGTD---------- 177 (361)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT-SSEEEEEETTTT----------
T ss_pred CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC-CCEEEEEeCCCC----------
Confidence 677999986554 66666542 2221111 01001 12335688999995 75 999886431
Q ss_pred eecCCCceEEEEcCCCC----e-E-------EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--
Q 048181 173 ITNDSTGRLLSYNPRSS----Q-V-------TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-- 238 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~~g----~-~-------~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-- 238 (310)
.=.+|.++..++ + + .........|++++|+|||++||++....++|..|+++. +..+.
T Consensus 178 -----~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~~~~~ 249 (361)
T 3scy_A 178 -----QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GMLDEIQ 249 (361)
T ss_dssp -----EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEEEEEE
T ss_pred -----EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---CceEEeE
Confidence 013444555443 2 2 122233457899999999999999998899999999873 33322
Q ss_pred --ecCC---CCCceeeeCCCCCCc-EEEEEec
Q 048181 239 --INFQ---AKPHNIKRNPGLLQT-FWEAAII 264 (310)
Q Consensus 239 --~~l~---g~Pdgl~~d~~~dG~-l~va~~~ 264 (310)
...+ ..|.++++++ ||+ ||++...
T Consensus 250 ~~~~~~~~~~~~~~i~~sp--dg~~l~v~~~~ 279 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSP--DGKYLYASNRL 279 (361)
T ss_dssp EEESCSSCCCCEEEEEECT--TSSEEEEEECS
T ss_pred EEecCCCCCCCcccEEECC--CCCEEEEECCC
Confidence 1121 2467999999 996 7787765
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.39 E-value=9.2e-11 Score=104.98 Aligned_cols=204 Identities=11% Similarity=0.063 Sum_probs=133.6
Q ss_pred CCcce-EEEccCCCEEEEEeCC-C--eEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-eE
Q 048181 34 FGGES-IAFEPVGGAFYTGVAD-G--RILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-QL 108 (310)
Q Consensus 34 ~~Peg-ia~d~~G~l~~~d~~~-g--~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~L 108 (310)
..|.. ++++++|+.+|+.... + .|..++.+.+...-.. .....|.+++++ ++| .|
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~-------------------~~~~~~~~~~~s-pdg~~l 142 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI-------------------PIPYDAVGIAIS-PNGNGL 142 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE-------------------ECCTTEEEEEEC-TTSSCE
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE-------------------ECCCCccceEEC-CCCCEE
Confidence 36778 9999999977765544 3 8999998754321110 123468899998 566 59
Q ss_pred EEEeCC-Cc-EEEEeCCC-CeEEEe-eccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEE
Q 048181 109 YIADAY-SG-LLVVGPNG-RLATQL-ATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLS 183 (310)
Q Consensus 109 yVad~~-~g-i~~id~~~-~~~~~~-~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~ 183 (310)
|+++.. .. |..++.+. +..... ..... ....|.+++++|+ |+ +|+++.. ++.+..
T Consensus 143 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~spd-g~~l~v~~~~-----------------~~~v~v 202 (331)
T 3u4y_A 143 ILIDRSSANTVRRFKIDADGVLFDTGQEFIS--GGTRPFNITFTPD-GNFAFVANLI-----------------GNSIGI 202 (331)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEEEC--SSSSEEEEEECTT-SSEEEEEETT-----------------TTEEEE
T ss_pred EEEecCCCceEEEEEECCCCcEeecCCcccc--CCCCccceEECCC-CCEEEEEeCC-----------------CCeEEE
Confidence 998764 45 55544332 222111 11111 1234789999995 75 8998754 367888
Q ss_pred EcCCCCeE---EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-----ecC---C---CCCceee
Q 048181 184 YNPRSSQV---TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-----INF---Q---AKPHNIK 249 (310)
Q Consensus 184 ~d~~~g~~---~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-----~~l---~---g~Pdgl~ 249 (310)
+|..+++. ......-..|.+++++|||++||++....+.|+.+++.. +..+. ..+ + ....+++
T Consensus 203 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (331)
T 3u4y_A 203 LETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS---GTLSFVKSFGHGLLIDPRPLFGANQMA 279 (331)
T ss_dssp EECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT---TEEEEEEEEECCCCCCCGGGTTCCCEE
T ss_pred EECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC---CceeeecccccccccCCCCcccccceE
Confidence 88877764 333344468999999999999999988888899998764 33211 111 1 1235589
Q ss_pred eCCCCCCc-EEEEEecCCCCCCCCceeeEEECCCCcEEEEEe
Q 048181 250 RNPGLLQT-FWEAAIITRQPAGTPVPIGQRISAFGAVLDTIS 290 (310)
Q Consensus 250 ~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~ 290 (310)
+++ ||. ||++....+ .+..++-+++.+..+.
T Consensus 280 ~sp--dg~~l~v~~~~~~--------~v~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 280 LNK--TETKLFISANISR--------ELKVFTISGKVVGYVA 311 (331)
T ss_dssp ECT--TSSEEEEEETTTT--------EEEEEETTSCEEEECT
T ss_pred ECC--CCCEEEEecCCCC--------cEEEEEecCCccccee
Confidence 999 996 788876653 6778887777666553
No 84
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=6.2e-11 Score=107.39 Aligned_cols=183 Identities=13% Similarity=0.117 Sum_probs=123.0
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
.|.+++++++|++|++. ...|++++++++ .+.+.... ......+++.+++| ++|++|+++.
T Consensus 91 ~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~---------------~~~~~~~~~~i~~d-~~G~l~v~~~ 152 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLHAELE---------------SDLPGNRSNDGRMH-PSGALWIGTM 152 (326)
T ss_dssp CEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEEECSS---------------TTCTTEEEEEEEEC-TTSCEEEEEE
T ss_pred cceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEEeeCC---------------CCCCCCCCCCEEEC-CCCCEEEEeC
Confidence 68899999999976665 456999998644 43332100 00123468899998 7899999864
Q ss_pred C-------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 114 Y-------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 114 ~-------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
. .+|++++ + ++.+.+.. .+..+|++++++++..+|+++... ++|+++|.
T Consensus 153 ~~~~~~~~~~l~~~~-~-g~~~~~~~-----~~~~~~~i~~s~dg~~lyv~~~~~-----------------~~I~~~d~ 208 (326)
T 2ghs_A 153 GRKAETGAGSIYHVA-K-GKVTKLFA-----DISIPNSICFSPDGTTGYFVDTKV-----------------NRLMRVPL 208 (326)
T ss_dssp ETTCCTTCEEEEEEE-T-TEEEEEEE-----EESSEEEEEECTTSCEEEEEETTT-----------------CEEEEEEB
T ss_pred CCcCCCCceEEEEEe-C-CcEEEeeC-----CCcccCCeEEcCCCCEEEEEECCC-----------------CEEEEEEc
Confidence 2 3599999 4 56554432 245689999999533699998642 56888875
Q ss_pred C--CC-eE---EEee---cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCC-CCceeeeC-CCCC
Q 048181 187 R--SS-QV---TVLL---RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQA-KPHNIKRN-PGLL 255 (310)
Q Consensus 187 ~--~g-~~---~~~~---~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g-~Pdgl~~d-~~~d 255 (310)
+ ++ ++ +.+. .....|+|++++++|+ ||++....++|++|+.++. ......++. .|.+++++ + +
T Consensus 209 ~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~---~~~~i~~~~~~~~~~af~g~--d 282 (326)
T 2ghs_A 209 DARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN---HIARYEVPGKQTTCPAFIGP--D 282 (326)
T ss_dssp CTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC---EEEEEECSCSBEEEEEEEST--T
T ss_pred ccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC---EEEEEECCCCCcEEEEEecC--C
Confidence 4 45 32 2221 1234689999999996 9999988899999987432 112123332 48889997 5 6
Q ss_pred C-cEEEEEecC
Q 048181 256 Q-TFWEAAIIT 265 (310)
Q Consensus 256 G-~l~va~~~~ 265 (310)
+ .||++....
T Consensus 283 ~~~L~vt~~~~ 293 (326)
T 2ghs_A 283 ASRLLVTSARE 293 (326)
T ss_dssp SCEEEEEEBCT
T ss_pred CCEEEEEecCC
Confidence 5 699987664
No 85
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.39 E-value=1.4e-10 Score=103.98 Aligned_cols=238 Identities=13% Similarity=0.075 Sum_probs=135.9
Q ss_pred eEEEeCCCCCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 24 FTKILFPPKAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
+++++++. ...|.+++++++|+ +|++...+++|+.++.+++......... ... ......|.+++++
T Consensus 34 ~~~~~~~~-~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~-------~~~-----~~~~~~~~~~~~s 100 (349)
T 1jmx_B 34 YKSCVMPD-KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS-------SVP-----GEVGRSMYSFAIS 100 (349)
T ss_dssp EEEEECSS-CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC-------CST-----TEEEECSSCEEEC
T ss_pred EEEEecCC-CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc-------ccc-----ccccccccceEEC
Confidence 34455553 23699999999997 4555667899999998754322111000 000 0002247789997
Q ss_pred cCCCeEEEEeCC------------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCC-ccCccce-
Q 048181 103 YATRQLYIADAY------------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASG-VYDFRTI- 168 (310)
Q Consensus 103 ~~~g~LyVad~~------------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~-~~~~~~~- 168 (310)
+....||++... ..|..+|.++++.......... -..+.+++++++ |++|+++..- .++....
T Consensus 101 pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~d-g~l~~~~~~i~~~d~~~~~ 177 (349)
T 1jmx_B 101 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADD-GSLYVAGPDIYKMDVKTGK 177 (349)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTT-SCEEEESSSEEEECTTTCC
T ss_pred CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCC-CcEEEccCcEEEEeCCCCc
Confidence 444467877632 4588899876432111111111 124678889994 8888864320 0011000
Q ss_pred eEeeeecCC---------------------------------------------CceEEEEcCCCCeEEEee--cCCCCC
Q 048181 169 VKLNITNDS---------------------------------------------TGRLLSYNPRSSQVTVLL--RNLTGP 201 (310)
Q Consensus 169 ~~~~~~~~~---------------------------------------------~G~l~~~d~~~g~~~~~~--~~l~~p 201 (310)
....+.... ...++.+|..+++++.+. ..-..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
T 1jmx_B 178 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 257 (349)
T ss_dssp EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcc
Confidence 000000000 001122444444443322 122367
Q ss_pred ceeEEcc-CCCEEEEEecCCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEE
Q 048181 202 AGVAISV-DSSFLLVSEFTGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQR 278 (310)
Q Consensus 202 nGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~ 278 (310)
.+++++| ||++||++ .++|++|++.. ++.. .......|.++++++ +|+ ||++... ..+..
T Consensus 258 ~~~~~sp~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~---------~~v~v 320 (349)
T 1jmx_B 258 FTGLRSPKDPNQIYGV---LNRLAKYDLKQ---RKLIKAANLDHTYYCVAFDK--KGDKLYLGGTF---------NDLAV 320 (349)
T ss_dssp EEEEECSSCTTEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEECS--SSSCEEEESBS---------SEEEE
T ss_pred eeeEecCCCCCEEEEE---cCeEEEEECcc---CeEEEEEcCCCCccceEECC--CCCEEEEecCC---------CeEEE
Confidence 8999999 99999998 67999998753 3321 123344689999999 985 7775333 26888
Q ss_pred ECC-CCcEEEEEecCCC
Q 048181 279 ISA-FGAVLDTISFEAQ 294 (310)
Q Consensus 279 ~~~-~G~~~~~~~~p~~ 294 (310)
+|. .++++..+..|.+
T Consensus 321 ~d~~~~~~~~~~~~~~~ 337 (349)
T 1jmx_B 321 FNPDTLEKVKNIKLPGG 337 (349)
T ss_dssp EETTTTEEEEEEECSSS
T ss_pred EeccccceeeeeecCCC
Confidence 896 5899999999844
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.38 E-value=8.7e-10 Score=100.90 Aligned_cols=184 Identities=16% Similarity=0.166 Sum_probs=130.2
Q ss_pred CCcceEEEccCCCEE-EEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe
Q 048181 34 FGGESIAFEPVGGAF-YTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~-~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad 112 (310)
..|.+++++++|+.+ +++..++.|+.++...+...... .....+.++++++.+..||++.
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~-------------------~~~~~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-------------------PAGSSPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-------------------ECSSSEEEEEECTTSSEEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE-------------------ECCCCccceEECCCCCEEEEEE
Confidence 358999999999854 56668899999998754322110 1123688999974444588887
Q ss_pred CC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 113 AY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 113 ~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.. ..|..+|.++++....... -..++++++++++..+|++... ++.|+.+|..+++.
T Consensus 93 ~~~~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGTVKT-----GKSPLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTKAV 150 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCeEEEEEeC-----CCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcE
Confidence 65 4599999988765433221 1246899999953357787643 37899999888877
Q ss_pred EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCc-EEEEEe
Q 048181 192 TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQT-FWEAAI 263 (310)
Q Consensus 192 ~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~-l~va~~ 263 (310)
......-..|++++++|||+.||++....+.|+.+++.. +... .......+.++++++ +|+ ||++..
T Consensus 151 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~--~g~~l~~~~~ 219 (391)
T 1l0q_A 151 INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT---NSVIDTVKVEAAPSGIAVNP--EGTKAYVTNV 219 (391)
T ss_dssp EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEECSSEEEEEEECT--TSSEEEEEEE
T ss_pred EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---CeEEEEEecCCCccceEECC--CCCEEEEEec
Confidence 665555567899999999999999999999999999864 2221 122344578899999 885 676664
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.38 E-value=4.8e-10 Score=100.07 Aligned_cols=191 Identities=12% Similarity=0.163 Sum_probs=118.6
Q ss_pred CCcceEEEccCCCEEEEEeC-CCeEEEEECC--C-ceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 34 FGGESIAFEPVGGAFYTGVA-DGRILKYQAP--D-GFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~-~g~I~r~~~~--g-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
..|.+++|+++|+.+|+... +++|..++.+ + ....+... .....|.++++++....||
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~s~dg~~l~ 99 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES------------------ALPGSLTHISTDHQGQFVF 99 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE------------------ECSSCCSEEEECTTSSEEE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc------------------ccCCCCcEEEEcCCCCEEE
Confidence 46899999999985555544 4888876644 3 33322210 1123688999974334588
Q ss_pred EEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++....+ |..++.+.+........... ...++++++++++..+|+++.. +++|+.+|..+
T Consensus 100 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~ 160 (343)
T 1ri6_A 100 VGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALK-----------------QDRICLFTVSD 160 (343)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEEECT
T ss_pred EEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCC-----------------CCEEEEEEecC
Confidence 8876544 77776633322222222222 2358899999963368887633 25677776654
Q ss_pred -CeEEEe------ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee----ecCC------CCCceeeeC
Q 048181 189 -SQVTVL------LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI----INFQ------AKPHNIKRN 251 (310)
Q Consensus 189 -g~~~~~------~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~----~~l~------g~Pdgl~~d 251 (310)
+++... ...-..|++++++|||++||++....++|..|+++.. .+..+. ..++ ..|.+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccccccCCccceEEC
Confidence 554321 1223478899999999999999988999999998642 233221 2222 135579999
Q ss_pred CCCCCc-EEEEEec
Q 048181 252 PGLLQT-FWEAAII 264 (310)
Q Consensus 252 ~~~dG~-l~va~~~ 264 (310)
+ +|+ ||++...
T Consensus 240 ~--dg~~l~v~~~~ 251 (343)
T 1ri6_A 240 P--DGRHLYACDRT 251 (343)
T ss_dssp T--TSSEEEEEETT
T ss_pred C--CCCEEEEEecC
Confidence 9 995 6777643
No 88
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.35 E-value=2.6e-11 Score=109.56 Aligned_cols=174 Identities=14% Similarity=0.125 Sum_probs=115.5
Q ss_pred CCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEe-eccCC--CccccCccceEE---eCCCCeEEE-EcCCCcc
Q 048181 92 ICRRTFGLALHYATRQLYIADAYS-GLLVVGPNGRLATQL-ATGAE--GQAFHFLDGLDV---DQGTGVVYF-TDASGVY 163 (310)
Q Consensus 92 ~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~~~~~~~-~~~~~--g~~~~~pndvav---d~~~G~lyv-td~~~~~ 163 (310)
....|-+.++|+.++++|+++... .|.+++++++..+.+ ..... +.+...+.||.+ |++ |+||+ +|....|
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccc
Confidence 345788999997789999999765 499999986654444 11111 445556789999 795 99998 5543222
Q ss_pred CccceeEeeeecCCCceEEEEcCC---CCeEEEeec--------------CCCCCceeEEccCCCEEEEEecCC-CeEEE
Q 048181 164 DFRTIVKLNITNDSTGRLLSYNPR---SSQVTVLLR--------------NLTGPAGVAISVDSSFLLVSEFTG-NRTLK 225 (310)
Q Consensus 164 ~~~~~~~~~~~~~~~G~l~~~d~~---~g~~~~~~~--------------~l~~pnGIa~~~dg~~Lyv~d~~~-~~I~~ 225 (310)
..... ...+...|++||.. +++.....+ ....+|+|+++++|+ .||+++.. +.|+|
T Consensus 90 ~~~g~-----~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~r 163 (334)
T 2p9w_A 90 NFADQ-----SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIAR 163 (334)
T ss_dssp CTTSC-----CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEE
T ss_pred ccccc-----ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEE
Confidence 21100 11235679999987 565433221 223589999999998 89999999 99999
Q ss_pred EEecCCCCCceeeec--C--CCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCC
Q 048181 226 YWLRGPRANSFDIIN--F--QAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 226 ~~~~~~~~g~~~~~~--l--~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
++.+|.......+.. . ...+.||++.+ +|+++++....+ ++.+||.+
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~p--dg~~Liv~~~~g--------~L~~fD~~ 214 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDP--HSNKLIAFGGPR--------ALTAFDVS 214 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEET--TTTEEEEESSSS--------SEEEEECS
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeC--CCCEEEEEcCCC--------eEEEEcCC
Confidence 999875221111111 0 12488999999 997665554442 57777754
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=1.4e-09 Score=96.41 Aligned_cols=192 Identities=10% Similarity=0.031 Sum_probs=132.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCcEEEEeCC
Q 048181 44 VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLVVGPN 123 (310)
Q Consensus 44 ~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~gi~~id~~ 123 (310)
.|++++++..+++|+.++++.+...+.... .....++.+++. ++|++|++ ...+|+.+|++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-----------------~~~~~~~~~~~~-pdG~ilvs-~~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-----------------EKGWECNSVAAT-KAGEILFS-YSKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC-----------------CTTCCCCEEEEC-TTSCEEEE-CBSEEEEECTT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC-----------------CccCCCcCeEEC-CCCCEEEe-CCCCEEEECCC
Confidence 367788888999999999954444443211 111357788886 78999985 45579999995
Q ss_pred CCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE-Eee------c
Q 048181 124 GRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT-VLL------R 196 (310)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~-~~~------~ 196 (310)
+..+..+.. ..+ ...+.+.+.+ +|++++++... +++++.+|++ |+.. .+. .
T Consensus 65 G~~~W~~~~-~~~---~~~~~~~~~~-dG~~lv~~~~~----------------~~~v~~vd~~-Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 65 GRELWNIAA-PAG---CEMQTARILP-DGNALVAWCGH----------------PSTILEVNMK-GEVLSKTEFETGIER 122 (276)
T ss_dssp SCEEEEEEC-CTT---CEEEEEEECT-TSCEEEEEEST----------------TEEEEEECTT-SCEEEEEEECCSCSS
T ss_pred CCEEEEEcC-CCC---ccccccEECC-CCCEEEEecCC----------------CCEEEEEeCC-CCEEEEEeccCCCCc
Confidence 544444322 111 1346778888 59999998641 2567777764 4322 111 1
Q ss_pred CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCcee
Q 048181 197 NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPI 275 (310)
Q Consensus 197 ~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~ 275 (310)
....|.+++++++|+ +++++..+++|..|+.+|. ..- ...++.|.+..+.+ +|+++++.... .+
T Consensus 123 ~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~G~----~~w~~~~~~~~~~~~~~~--~g~~~v~~~~~--------~~ 187 (276)
T 3no2_A 123 PHAQFRQINKNKKGN-YLVPLFATSEVREIAPNGQ----LLNSVKLSGTPFSSAFLD--NGDCLVACGDA--------HC 187 (276)
T ss_dssp GGGSCSCCEECTTSC-EEEEETTTTEEEEECTTSC----EEEEEECSSCCCEEEECT--TSCEEEECBTT--------SE
T ss_pred ccccccCceECCCCC-EEEEecCCCEEEEECCCCC----EEEEEECCCCccceeEcC--CCCEEEEeCCC--------Ce
Confidence 223578999999998 6788999999999987642 211 33345688999999 99999998765 37
Q ss_pred eEEECCC-CcEEEEEec
Q 048181 276 GQRISAF-GAVLDTISF 291 (310)
Q Consensus 276 v~~~~~~-G~~~~~~~~ 291 (310)
++.+|++ |+++-.+..
T Consensus 188 v~~~d~~tG~~~w~~~~ 204 (276)
T 3no2_A 188 FVQLNLESNRIVRRVNA 204 (276)
T ss_dssp EEEECTTTCCEEEEEEG
T ss_pred EEEEeCcCCcEEEEecC
Confidence 9999998 999999874
No 90
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.33 E-value=1.3e-10 Score=109.42 Aligned_cols=235 Identities=11% Similarity=0.021 Sum_probs=138.1
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEe----------CCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCC
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGV----------ADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGP 91 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~----------~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~ 91 (310)
+.+|+.. ..| ++++++||+.+|+.. .++.|..||...... .+...+.. . ..
T Consensus 112 v~~I~vG---~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~------------r-~~ 174 (426)
T 3c75_H 112 LGMTDGG---FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP------------R-FL 174 (426)
T ss_dssp EEEEEEC---SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC------------C-CC
T ss_pred EEEEECC---CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc------------c-cc
Confidence 4445555 368 999999997666654 356799998875322 22211000 0 01
Q ss_pred CCCceeeEEEecCCCeEEEEeCC--CcEEEEeCCCCeEEEeeccCCCccccCccc----eEEeCCCCeEEEEcCCCc---
Q 048181 92 ICRRTFGLALHYATRQLYIADAY--SGLLVVGPNGRLATQLATGAEGQAFHFLDG----LDVDQGTGVVYFTDASGV--- 162 (310)
Q Consensus 92 ~~~~P~Gla~d~~~g~LyVad~~--~gi~~id~~~~~~~~~~~~~~g~~~~~pnd----vavd~~~G~lyvtd~~~~--- 162 (310)
....|.+++++++.++|||++.. +.|.+||.+++++..-... .+.....|.+ +++.++ |++++-+....
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v-~g~~~~~p~g~~~~v~~~~d-G~~~~V~~~~~~v~ 252 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV-PDCYHIFPASPTVFYMNCRD-GSLARVDFADGETK 252 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-CSEEEEEEEETTEEEEEETT-SSEEEEECCTTCCE
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc-CCceeeccCCCcEEEEEcCC-CCEEEEECCCCcEE
Confidence 23579999998556689999853 4599999998765322221 1212233444 778874 66554443211
Q ss_pred ------cCccc---ee--------EeeeecCCCceEEEEcCCCCeEEEeec----------CCCCCce---eEEccCCCE
Q 048181 163 ------YDFRT---IV--------KLNITNDSTGRLLSYNPRSSQVTVLLR----------NLTGPAG---VAISVDSSF 212 (310)
Q Consensus 163 ------~~~~~---~~--------~~~~~~~~~G~l~~~d~~~g~~~~~~~----------~l~~pnG---Ia~~~dg~~ 212 (310)
+.... +. ..++.....|+++.+|..++.++.... .-..|.| +++++||++
T Consensus 253 ~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~r 332 (426)
T 3c75_H 253 VTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDR 332 (426)
T ss_dssp EEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTE
T ss_pred EEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCE
Confidence 00000 00 000111224677788765444433211 0013555 999999999
Q ss_pred EEEEecC---------CCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCc--EEEEEecCCCCCCCCceeeEEECC
Q 048181 213 LLVSEFT---------GNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQT--FWEAAIITRQPAGTPVPIGQRISA 281 (310)
Q Consensus 213 Lyv~d~~---------~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~--l~va~~~~~~~~~~~~~~v~~~~~ 281 (310)
|||+... .+.|+++|....+ ......++..|++|++++ ||+ +|++.+..+ .|..+|.
T Consensus 333 lyVa~~~~~~gthk~~s~~VsVID~~T~k--vv~~I~vg~~P~gia~sp--Dg~~~lyv~n~~s~--------~VsVID~ 400 (426)
T 3c75_H 333 IYLLVDQRDEWKHKAASRFVVVLNAETGE--RINKIELGHEIDSINVSQ--DAEPLLYALSAGTQ--------TLHIYDA 400 (426)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEEEEEECEEEECC--SSSCEEEEEETTTT--------EEEEEET
T ss_pred EEEEecccccccccCCCCEEEEEECCCCe--EEEEEECCCCcCeEEEcc--CCCEEEEEEcCCCC--------eEEEEEC
Confidence 9999752 3579999975321 111122334699999999 997 556555443 7889995
Q ss_pred -CCcEEEEE
Q 048181 282 -FGAVLDTI 289 (310)
Q Consensus 282 -~G~~~~~~ 289 (310)
.++++..+
T Consensus 401 ~t~kvv~tI 409 (426)
T 3c75_H 401 ATGEELRSV 409 (426)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 69999888
No 91
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=5.8e-10 Score=102.19 Aligned_cols=213 Identities=13% Similarity=0.071 Sum_probs=123.4
Q ss_pred CCCcceEEEccCCCEEEEEeCCCeEEEEEC--CCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe---
Q 048181 33 AFGGESIAFEPVGGAFYTGVADGRILKYQA--PDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ--- 107 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~~~g~I~r~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~--- 107 (310)
...|.+++++++|+.+|+.... .|..++. +++....... ...+.|..++++ ++|+
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~------------------~~~g~~~~~~~s-pdg~~l~ 98 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH------------------PIGGHPRANDAD-TNTRAIF 98 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE------------------ECCSSGGGGCTT-SCCEEEE
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe------------------ecCCCCccEEEC-CCCCEEE
Confidence 4579999999999866666544 7777664 3433221100 011246678886 6776
Q ss_pred EEEEe-------------CCCcEEEEeCC-CCeEEEeeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEee
Q 048181 108 LYIAD-------------AYSGLLVVGPN-GRLATQLATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 108 LyVad-------------~~~gi~~id~~-~~~~~~~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~~ 172 (310)
+|+++ ....+..++.+ .++..........+....|++++++|+ | .+|++|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd-G~~l~~~~~~~----------- 166 (365)
T 1jof_A 99 LLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT-ETYLYSADLTA----------- 166 (365)
T ss_dssp EEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT-SSEEEEEETTT-----------
T ss_pred EEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC-CCEEEEEcCCC-----------
Confidence 33443 22224444433 233322111111012346899999995 6 588887532
Q ss_pred eecCCCceEEEEcCC-CCeEEEee--c---CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-----eecC
Q 048181 173 ITNDSTGRLLSYNPR-SSQVTVLL--R---NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-----IINF 241 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~-~g~~~~~~--~---~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-----~~~l 241 (310)
++|+.++.+ +++++.+. . ....|.+++|+|||++||++....++|..|+++.. .|... +..+
T Consensus 167 ------~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 167 ------NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFPLI 239 (365)
T ss_dssp ------TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEESS
T ss_pred ------CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEEcC
Confidence 456666655 56654321 1 13569999999999999999888889888877631 23321 1222
Q ss_pred C----C---------CCceee-eCCCCCCc-EEEEEecCCCCCCCCceeeEEECCCCcEEE
Q 048181 242 Q----A---------KPHNIK-RNPGLLQT-FWEAAIITRQPAGTPVPIGQRISAFGAVLD 287 (310)
Q Consensus 242 ~----g---------~Pdgl~-~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~~G~~~~ 287 (310)
+ + .|.+++ +++ ||+ ||++....... .+..-.+..++++|++..
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~sp--dG~~l~v~~~~~~~~-~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTF--SGKYMFASSRANKFE-LQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECT--TSSEEEEEEEESSTT-SCCEEEEEEECTTSCEEE
T ss_pred CCCcCCcccccccccccccEEEECC--CCCEEEEECCCCCCC-CCCeEEEEEECCCCCEEE
Confidence 2 1 377899 999 995 78887654200 000123455556787654
No 92
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.30 E-value=1.6e-10 Score=105.78 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=106.7
Q ss_pred CCCCceeeEEEecCCCeEEEEeC-CCcEEEEeCCCCeEEEeecc--CCCccccCccceEEeCC---CCeEEEEcCCCccC
Q 048181 91 PICRRTFGLALHYATRQLYIADA-YSGLLVVGPNGRLATQLATG--AEGQAFHFLDGLDVDQG---TGVVYFTDASGVYD 164 (310)
Q Consensus 91 ~~~~~P~Gla~d~~~g~LyVad~-~~gi~~id~~~~~~~~~~~~--~~g~~~~~pndvavd~~---~G~lyvtd~~~~~~ 164 (310)
..+..|.+|++. ++|+|||++. ...|++++.++++.+.+... ........++||+++|+ +|.||++.+..
T Consensus 29 ~gL~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~--- 104 (347)
T 3das_A 29 TGLNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA--- 104 (347)
T ss_dssp CCCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS---
T ss_pred cCCCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC---
Confidence 356789999997 7899999998 44599999876665544321 11223457899999983 59999975421
Q ss_pred ccceeEeeeecCCCceEEEEcCCCC--------eEEEeec-----CCCCCceeEEccCCCEEEEEe-------------c
Q 048181 165 FRTIVKLNITNDSTGRLLSYNPRSS--------QVTVLLR-----NLTGPAGVAISVDSSFLLVSE-------------F 218 (310)
Q Consensus 165 ~~~~~~~~~~~~~~G~l~~~d~~~g--------~~~~~~~-----~l~~pnGIa~~~dg~~Lyv~d-------------~ 218 (310)
...+|+|+..+.+ +.+++.. ...+++.|+|+|||+ |||+. .
T Consensus 105 ------------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~ 171 (347)
T 3das_A 105 ------------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKS 171 (347)
T ss_dssp ------------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTC
T ss_pred ------------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCC
Confidence 1246777754321 2333332 334677899999996 99984 2
Q ss_pred CCCeEEEEEecCCCC-C----ceee--ecCCCCCceeeeCCCCCCcEEEEEecCC
Q 048181 219 TGNRTLKYWLRGPRA-N----SFDI--INFQAKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 219 ~~~~I~~~~~~~~~~-g----~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
..++|+|++.+|.-. . ..++ .++- -|.||++|+ +|.||+++++.+
T Consensus 172 ~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp--~G~L~~~d~g~~ 223 (347)
T 3das_A 172 LGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDD--KQRLFASEFGQD 223 (347)
T ss_dssp STTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECT--TCCEEEEECCSS
T ss_pred CCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECC--CCCEEEEecCCC
Confidence 468999999886410 0 1233 3333 499999999 999999998764
No 93
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.30 E-value=1.8e-09 Score=98.19 Aligned_cols=216 Identities=13% Similarity=0.082 Sum_probs=127.5
Q ss_pred CCcceEEEccCCC-EEEEEeCCCeEEEEECC--CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EE
Q 048181 34 FGGESIAFEPVGG-AFYTGVADGRILKYQAP--DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~--g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-Ly 109 (310)
..|.++++ +|+ +|+++..++.|..++.+ +....+... ....|............|++++++ ++|+ ||
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~s-pdg~~l~ 170 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDV------IEFKGSGPDKERQTMPHLHCVRIT-PDGKYLL 170 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE------EECCCCCSCTTTCSSCCEEEEEEC-TTSSEEE
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCccccee------EEccCCCCCccccCCCcceEEEEC-CCCCEEE
Confidence 47889998 566 44445567888877754 222111000 000111000011224467899998 5665 99
Q ss_pred EEeCCCc-EEEE--eCCCC----e-EEE-----eeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEeeeec
Q 048181 110 IADAYSG-LLVV--GPNGR----L-ATQ-----LATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 110 Vad~~~g-i~~i--d~~~~----~-~~~-----~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
+++...+ |..+ +..++ + +.. .... .....|+.++++|+ | .+|+++...
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~spd-g~~l~v~~~~~-------------- 232 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV---APGSGPRHLIFNSD-GKFAYLINEIG-------------- 232 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC---CTTCCEEEEEECTT-SSEEEEEETTT--------------
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceec---CCCCCCeEEEEcCC-CCEEEEEcCCC--------------
Confidence 9887543 5444 54443 2 211 1111 12345789999995 6 588887432
Q ss_pred CCCceEEEEcCCCCeEEEee------cCCCCCceeEEccCCCEEEEEecC-CCeEEEEEecCCCCCceee-ecC--CCCC
Q 048181 176 DSTGRLLSYNPRSSQVTVLL------RNLTGPAGVAISVDSSFLLVSEFT-GNRTLKYWLRGPRANSFDI-INF--QAKP 245 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~------~~l~~pnGIa~~~dg~~Lyv~d~~-~~~I~~~~~~~~~~g~~~~-~~l--~g~P 245 (310)
+.|..++.++++++.+. .....|.+|+|+|||++||++... .++|..|+++.. .+..+. ..+ ...|
T Consensus 233 ---~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g~~~~~~~~~~g~~~ 308 (361)
T 3scy_A 233 ---GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-NGTLTKVGYQLTGIHP 308 (361)
T ss_dssp ---CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-TCCEEEEEEEECSSCC
T ss_pred ---CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CCcEEEeeEecCCCCC
Confidence 45666665556554332 123457799999999999999988 889999988632 234332 222 3469
Q ss_pred ceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEECC-CCcEEEE
Q 048181 246 HNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRISA-FGAVLDT 288 (310)
Q Consensus 246 dgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~ 288 (310)
.++++++ ||+ ||++..... .-.+.++|+ .|++...
T Consensus 309 ~~~~~sp--dg~~l~~~~~~~~------~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 309 RNFIITP--NGKYLLVACRDTN------VIQIFERDQATGLLTDI 345 (361)
T ss_dssp CEEEECT--TSCEEEEEETTTT------EEEEEEECTTTCCEEEC
T ss_pred ceEEECC--CCCEEEEEECCCC------CEEEEEEECCCCcEeec
Confidence 9999999 997 788875542 124555786 5776543
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.28 E-value=2e-09 Score=99.80 Aligned_cols=219 Identities=12% Similarity=0.100 Sum_probs=143.0
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
...++++.++|.+|+++..++.|..++.+.+...... ......+.++++++.+..+|++...
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV------------------DLTGKWSKILLYDPIRDLVYCSNWI 232 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE------------------ECSSSSEEEEEEETTTTEEEEEETT
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE------------------cCCCCCeeEEEEcCCCCEEEEEecC
Confidence 4567899999998888888999999997753221110 0123467899998545567788754
Q ss_pred -CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 115 -SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 115 -~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
..|..+|.++++....... ...+.++++++++..+|++...... ....+|.|+.+|..+++...
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~----------~~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASN----------QESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp TTEEEEEETTTTEEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCT----------TCSCCEEEEEEETTTTEEEE
T ss_pred CCcEEEEECCCCcEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCc----------cccCCCeEEEEECCCCcEEe
Confidence 3488999887765332211 1237899999963367776532210 00136789999988777655
Q ss_pred eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCc-EEEEEecCCCCC--
Q 048181 194 LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQT-FWEAAIITRQPA-- 269 (310)
Q Consensus 194 ~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~-l~va~~~~~~~~-- 269 (310)
.......+.+++++|+|+.||++....++|..++++. +.... ......|.++++++ +|. +|++........
T Consensus 298 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 298 TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPVFDKPNTIALSP--DGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEECSSSEEEEEECT--TSSEEEEEECCCCCTTTC
T ss_pred eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecCCCCCCeEEEcC--CCCEEEEEecCCCccccc
Confidence 5433347889999999999999999999999999863 22221 22334588999999 996 777776432100
Q ss_pred ----CCCceeeEEECC-CCcEEEEEec
Q 048181 270 ----GTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 270 ----~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
...-+.+..+|. .|+++..+..
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEEC
T ss_pred cccccccceEEEEEECCCCcEEEEecC
Confidence 000125666664 4666655543
No 95
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.27 E-value=1.5e-10 Score=110.09 Aligned_cols=166 Identities=12% Similarity=0.121 Sum_probs=106.6
Q ss_pred CCCCceeeEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEeeccCCC----ccccCccceEEeCC---CCeEEEEcCCCc
Q 048181 91 PICRRTFGLALHYATRQLYIADAYS-GLLVVGPNGRLATQLATGAEG----QAFHFLDGLDVDQG---TGVVYFTDASGV 162 (310)
Q Consensus 91 ~~~~~P~Gla~d~~~g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g----~~~~~pndvavd~~---~G~lyvtd~~~~ 162 (310)
..+..|.+|+++ ++|+|||++... .|++++..+++.+.+...... .....+.||+++|+ +|.|||+++...
T Consensus 24 ~~l~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 24 SNLNKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CCCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 346689999997 799999999875 499998766665554321110 01245679999995 699999986310
Q ss_pred cCccceeEeeeecCCCceEEEEcCCC--Ce---EEEeec-----CCCCCceeEEccCCCEEEEEecC-------------
Q 048181 163 YDFRTIVKLNITNDSTGRLLSYNPRS--SQ---VTVLLR-----NLTGPAGVAISVDSSFLLVSEFT------------- 219 (310)
Q Consensus 163 ~~~~~~~~~~~~~~~~G~l~~~d~~~--g~---~~~~~~-----~l~~pnGIa~~~dg~~Lyv~d~~------------- 219 (310)
-..... ......+|+|++.+. ++ .+++.. ....+++|+|+|||+ |||+.-.
T Consensus 103 ~~~~~~-----~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~~~~~ 176 (454)
T 1cru_A 103 PKSTDK-----ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLPN 176 (454)
T ss_dssp TTC--C-----CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGGGTTSCC
T ss_pred cCCCcc-----ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcccccccc
Confidence 000000 000024677775432 12 233332 346789999999996 9998431
Q ss_pred -------------------CCeEEEEEecCCCC-C-------ceee--ecCCCCCceeeeCCCCCCcEEEEEecCC
Q 048181 220 -------------------GNRTLKYWLRGPRA-N-------SFDI--INFQAKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 220 -------------------~~~I~~~~~~~~~~-g-------~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
.++|+|++.+|.-. + ..++ .++- -|.||++|+ +|.||+++++.+
T Consensus 177 ~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~R-Np~gla~dp--~G~L~~~d~g~~ 249 (454)
T 1cru_A 177 QAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHR-NPQGLAFTP--NGKLLQSEQGPN 249 (454)
T ss_dssp CTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCS-EEEEEEECT--TSCEEEEEECSS
T ss_pred ccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCC-CcceEEECC--CCCEEEEecCCC
Confidence 46899999876410 0 1233 3333 499999999 999999998764
No 96
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.27 E-value=3e-09 Score=103.26 Aligned_cols=187 Identities=9% Similarity=0.032 Sum_probs=122.9
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEEC--CCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec----CCCeEE
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQA--PDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY----ATRQLY 109 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~----~~g~Ly 109 (310)
|.+++++++|+.+|+...++.|..++. ..... +.. ......|.++++++ .+..||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~-~~~------------------i~~g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK-VAE------------------IKIGIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE-EEE------------------EECCSEEEEEEECCSTTCTTTEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE-EEE------------------EecCCCcceEEeCCCcCCCCCEEE
Confidence 889999999998888888899999998 43221 110 02345789999984 455788
Q ss_pred EEeC-CCcEEEEeCCCCeEEEeecc----CCC---ccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 110 IADA-YSGLLVVGPNGRLATQLATG----AEG---QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 110 Vad~-~~gi~~id~~~~~~~~~~~~----~~g---~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
+++. ...|..+|.++++....... .++ .+-..+..++++++++.+|++... +|+|
T Consensus 242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----------------~g~i 304 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----------------TGKV 304 (543)
T ss_dssp EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----------------TTEE
T ss_pred EEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----------------CCeE
Confidence 8875 34588899887665332221 111 112356788999865667776543 4788
Q ss_pred EEEcCCCCeE-E-EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCC---ceeee-CCCC
Q 048181 182 LSYNPRSSQV-T-VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKP---HNIKR-NPGL 254 (310)
Q Consensus 182 ~~~d~~~g~~-~-~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~P---dgl~~-d~~~ 254 (310)
+.+|..+.+. . .....-.+|.+++|+|||+++|++....+.|..++... ++..- ......| .+..+ ++
T Consensus 305 ~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t---g~l~~~i~~g~~ph~g~g~~~~~p-- 379 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDVGKTPHPGRGANFVHP-- 379 (543)
T ss_dssp EEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSBCCTTCEEEEET--
T ss_pred EEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC---CeEEEeeccCCCCCCCCCcccCCC--
Confidence 8888765431 1 12233467999999999999999999899999988753 33211 1111123 24443 55
Q ss_pred C-CcEEEEEe
Q 048181 255 L-QTFWEAAI 263 (310)
Q Consensus 255 d-G~l~va~~ 263 (310)
+ |.+|++..
T Consensus 380 ~~g~~~~s~~ 389 (543)
T 1nir_A 380 KYGPVWSTSH 389 (543)
T ss_dssp TTEEEEEEEB
T ss_pred CCccEEEecc
Confidence 5 78998875
No 97
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.26 E-value=1.2e-10 Score=107.17 Aligned_cols=159 Identities=10% Similarity=0.065 Sum_probs=102.6
Q ss_pred CCceeeEEEecCCCe-EEEEeCCCcEEEEeCCCCeEEEeecc--CCCccccCccceEEeCC---CCeEEEEcCCCccCcc
Q 048181 93 CRRTFGLALHYATRQ-LYIADAYSGLLVVGPNGRLATQLATG--AEGQAFHFLDGLDVDQG---TGVVYFTDASGVYDFR 166 (310)
Q Consensus 93 ~~~P~Gla~d~~~g~-LyVad~~~gi~~id~~~~~~~~~~~~--~~g~~~~~pndvavd~~---~G~lyvtd~~~~~~~~ 166 (310)
...|.+|+++ ++|+ |||++....|++++.++...+.+... ........+++|+++|+ +|.||++++.....
T Consensus 17 l~~P~~i~~~-pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~-- 93 (353)
T 2g8s_A 17 LDHPWALAFL-PDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD-- 93 (353)
T ss_dssp ESSEEEEEEC-STTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS--
T ss_pred CCCcEEEEEc-CCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC--
Confidence 4689999997 7899 99999876699998765322222211 11112346789999994 59999997532000
Q ss_pred ceeEeeeecCCCceEEEEcCCCC-----eEEEeecC-------CCCCceeEEccCCCEEEEEec-------------CCC
Q 048181 167 TIVKLNITNDSTGRLLSYNPRSS-----QVTVLLRN-------LTGPAGVAISVDSSFLLVSEF-------------TGN 221 (310)
Q Consensus 167 ~~~~~~~~~~~~G~l~~~d~~~g-----~~~~~~~~-------l~~pnGIa~~~dg~~Lyv~d~-------------~~~ 221 (310)
.....+|+|++.+.+ ..+++... ...+++|+|+||| .||++.- ..+
T Consensus 94 --------g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g 164 (353)
T 2g8s_A 94 --------GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQG 164 (353)
T ss_dssp --------SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTT
T ss_pred --------CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCe
Confidence 000236777654322 23333322 3458999999999 6999963 246
Q ss_pred eEEEEEecCCCC----------Cceee--ecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 222 RTLKYWLRGPRA----------NSFDI--INFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 222 ~I~~~~~~~~~~----------g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
+|+|++.++.-. ...++ .++. .|.||++|++ +|+||+++.+.
T Consensus 165 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~-~g~l~~~d~g~ 218 (353)
T 2g8s_A 165 KLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPW-SNALWLNEHGP 218 (353)
T ss_dssp EEEEEETTSCCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETT-TTEEEEEEECS
T ss_pred EEEEECCCCCCCCCCCCcCCCCCCccEEEEcCc-CccceEEECC-CCCEEEEecCC
Confidence 899999886410 01233 2333 4999999973 58999999875
No 98
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.26 E-value=3e-09 Score=93.15 Aligned_cols=191 Identities=11% Similarity=0.034 Sum_probs=123.4
Q ss_pred eecceEEEeCCCCCCCcceEEEccCCCEEEEEeCC--CeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCcee
Q 048181 20 SIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVAD--GRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTF 97 (310)
Q Consensus 20 ~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~--g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~ 97 (310)
.-..+++++... -.+-+|+.++ ++.||.+.-.. ++|.+++++.+...-.. .+ +......
T Consensus 30 ~~~vv~~~phd~-~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~----------------~l-~~~~Fge 90 (262)
T 3nol_A 30 DYQIVHSYPHDT-KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQI----------------EL-GKRYFGE 90 (262)
T ss_dssp EEEEEEEEECCT-TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEE----------------EC-CTTCCEE
T ss_pred ceEEEEEecCCC-CcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEE----------------ec-CCcccee
Confidence 334566776653 2345999998 67766655443 48999999854321110 00 1112345
Q ss_pred eEEEecCCCeEEEEeCCCc-EEEEeCCCCeEE-EeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeec
Q 048181 98 GLALHYATRQLYIADAYSG-LLVVGPNGRLAT-QLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~~g-i~~id~~~~~~~-~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
|++++ +++||+++...+ ++++|+++.+.. .+.. .+ ..-+++.| ++.||+||.+
T Consensus 91 Git~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~--~~----eG~glt~d--g~~L~~SdGs--------------- 145 (262)
T 3nol_A 91 GISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNY--DG----EGWGLTHN--DQYLIMSDGT--------------- 145 (262)
T ss_dssp EEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEEC--SS----CCCCEEEC--SSCEEECCSS---------------
T ss_pred EEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEEC--CC----CceEEecC--CCEEEEECCC---------------
Confidence 78885 789999987654 899999886542 3321 11 12355544 5789999842
Q ss_pred CCCceEEEEcCCCCeEEEee------cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee----eecC----
Q 048181 176 DSTGRLLSYNPRSSQVTVLL------RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD----IINF---- 241 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~------~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~----~~~l---- 241 (310)
++|+.+|+.+.++..-+ ..+..+|.+.+. +| .||+.....+.|.++|+.. |.+. +.++
T Consensus 146 ---~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~t---G~V~~~Id~~~L~~~~ 217 (262)
T 3nol_A 146 ---PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPET---GKVTGIIDLNGILAEA 217 (262)
T ss_dssp ---SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTT---CBEEEEEECTTGGGGS
T ss_pred ---CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCC---CcEEEEEECCcCcccc
Confidence 57999999887654322 134567889987 67 5999999999999998753 3332 1111
Q ss_pred ------CCCCceeeeCCCCCC-cEEEEEec
Q 048181 242 ------QAKPHNIKRNPGLLQ-TFWEAAII 264 (310)
Q Consensus 242 ------~g~Pdgl~~d~~~dG-~l~va~~~ 264 (310)
...|.|||+|+ ++ .|||+.-.
T Consensus 218 ~~~~~~~~vlNGIA~dp--~~~~lfVTGK~ 245 (262)
T 3nol_A 218 GPLPSPIDVLNGIAWDK--EHHRLFVTGKL 245 (262)
T ss_dssp CSCCSSCCCEEEEEEET--TTTEEEEEETT
T ss_pred ccccCcCCceEEEEEcC--CCCEEEEECCC
Confidence 13689999998 55 79999743
No 99
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.24 E-value=4.9e-09 Score=91.88 Aligned_cols=192 Identities=12% Similarity=0.013 Sum_probs=128.4
Q ss_pred CCceeeeecceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCC
Q 048181 14 LPRMVFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGP 91 (310)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~ 91 (310)
.|.-..+ ..+++++.+. -.+-+|+.++ ++.||.+.-..|+|.+++++.+.. .+ . +
T Consensus 37 ~~~~~~~-~Vv~~~phd~-~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-------------------~ 93 (268)
T 3nok_A 37 EPVRRVA-HIIREYPHAT-NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-------------------L 93 (268)
T ss_dssp CCEEEEE-EEEEEEECCT-TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-------------------C
T ss_pred Cccccce-EEEEEEcCCC-ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-------------------C
Confidence 4444444 4577787763 2456899998 467777776778999999885432 11 1 1
Q ss_pred CCCceeeEEEecCCCeEEEEeCCCc-EEEEeCCCCeEE-EeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcccee
Q 048181 92 ICRRTFGLALHYATRQLYIADAYSG-LLVVGPNGRLAT-QLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 92 ~~~~P~Gla~d~~~g~LyVad~~~g-i~~id~~~~~~~-~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~ 169 (310)
......|++++ +++||+++...+ ++++|+++.+.. .+. ..+ ..-+++.| +++||+||.+
T Consensus 94 ~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~--~~~----eGwGLt~D--g~~L~vSdGs--------- 154 (268)
T 3nok_A 94 GNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTR--YSG----EGWGLCYW--NGKLVRSDGG--------- 154 (268)
T ss_dssp TTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEE--CSS----CCCCEEEE--TTEEEEECSS---------
T ss_pred CCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEe--CCC----ceeEEecC--CCEEEEECCC---------
Confidence 11233578884 789999987655 899999986643 332 121 12466665 5899999842
Q ss_pred EeeeecCCCceEEEEcCCCCeEEEeec------CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee----ee
Q 048181 170 KLNITNDSTGRLLSYNPRSSQVTVLLR------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD----II 239 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~~~~~~~------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~----~~ 239 (310)
++|+.+|+.+.++..-+. .+.++|.+.+. +| .||++....++|.++|+.. |.+. +.
T Consensus 155 ---------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~T---G~V~~~Idl~ 220 (268)
T 3nok_A 155 ---------TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPAT---GTVVGVIDAS 220 (268)
T ss_dssp ---------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTT---CBEEEEEECH
T ss_pred ---------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCC---CcEEEEEECC
Confidence 579999998876543221 34577999987 67 5999999999999999753 3321 11
Q ss_pred cC-----------CCCCceeeeCCCCCC-cEEEEEe
Q 048181 240 NF-----------QAKPHNIKRNPGLLQ-TFWEAAI 263 (310)
Q Consensus 240 ~l-----------~g~Pdgl~~d~~~dG-~l~va~~ 263 (310)
++ ...|.|||.|+ ++ .|||+--
T Consensus 221 ~L~~~~~~~~~~~~~vlNGIA~dp--~~~rlfVTGK 254 (268)
T 3nok_A 221 ALTRAVAGQVTNPEAVLNGIAVEP--GSGRIFMTGK 254 (268)
T ss_dssp HHHHHHTTTCCCTTCCEEEEEECT--TTCCEEEEET
T ss_pred CCcccccccccCcCCceEEEEEcC--CCCEEEEeCC
Confidence 11 13689999998 54 7999853
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.21 E-value=1.2e-08 Score=94.58 Aligned_cols=184 Identities=13% Similarity=0.128 Sum_probs=126.0
Q ss_pred CCcceEEEccCCCEEEE-EeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe
Q 048181 34 FGGESIAFEPVGGAFYT-GVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~-d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad 112 (310)
..|.+++|+++|..+|+ +..++.|+.++...+..... ......|.++++++.+..||++.
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK-------------------TDKIGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE-------------------CCCCSEEEEEEECTTSSEEEEEE
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE-------------------ecCCCCceEEEEcCCCCEEEEEE
Confidence 57899999999886654 44789999999875432211 12234588999974444677776
Q ss_pred C--------CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 113 A--------YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 113 ~--------~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
. ...|..+|..+++...... ....+..+++++++..+|++... ++++..+
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~-----------------~~~v~v~ 330 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKLIDTIG-----PPGNKRHIVSGNTENKIYVSDMC-----------------CSKIEVY 330 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEEEEEEE-----EEECEEEEEECSSTTEEEEEETT-----------------TTEEEEE
T ss_pred CCCCccccCCCeEEEEECCCCcEEeecc-----CCCCcceEEECCCCCEEEEEecC-----------------CCEEEEE
Confidence 3 2248889988776543321 11256789999953368888653 3789999
Q ss_pred cCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCC--------------CeEEEEEecCCCCCcee-eecCCCCCceee
Q 048181 185 NPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTG--------------NRTLKYWLRGPRANSFD-IINFQAKPHNIK 249 (310)
Q Consensus 185 d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~--------------~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~ 249 (310)
|..+++..........+++++++|||++||++.... ++|+.+++.. ++.. .......|.+++
T Consensus 331 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~---~~~~~~~~~~~~~~~~~ 407 (433)
T 3bws_A 331 DLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT---DTVKEFWEAGNQPTGLD 407 (433)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT---TEEEEEEECSSSEEEEE
T ss_pred ECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC---CcEEEEecCCCCCceEE
Confidence 988787665555566789999999999999988764 4899998753 3222 122234689999
Q ss_pred eCCCCCCcE-EEEEe
Q 048181 250 RNPGLLQTF-WEAAI 263 (310)
Q Consensus 250 ~d~~~dG~l-~va~~ 263 (310)
+++ +|+. +++..
T Consensus 408 ~s~--dg~~l~~~~~ 420 (433)
T 3bws_A 408 VSP--DNRYLVISDF 420 (433)
T ss_dssp ECT--TSCEEEEEET
T ss_pred EcC--CCCEEEEEEC
Confidence 999 9965 45544
No 101
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.21 E-value=3.5e-09 Score=102.80 Aligned_cols=201 Identities=8% Similarity=-0.060 Sum_probs=135.8
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCcEEE
Q 048181 40 AFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLV 119 (310)
Q Consensus 40 a~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~gi~~ 119 (310)
++++++.+|++...++.|..++...+...-.. .....|+++++++....||+++....|..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i-------------------~~g~~~~~v~~spdg~~l~v~~~d~~V~v 204 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVI-------------------DTGYAVHISRMSASGRYLLVIGRDARIDM 204 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEE-------------------ECSTTEEEEEECTTSCEEEEEETTSEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEE-------------------ecCcccceEEECCCCCEEEEECCCCeEEE
Confidence 47888888888888899999998744221100 11223889999855557899987766999
Q ss_pred EeC--CCCeEEEeeccCCCccccCccceEEeC----CCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 120 VGP--NGRLATQLATGAEGQAFHFLDGLDVDQ----GTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 120 id~--~~~~~~~~~~~~~g~~~~~pndvavd~----~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
+|. ++++...-.. .+ ..|..++++| ++..+|+++.. ++.+..+|..++++..
T Consensus 205 ~D~~~~t~~~~~~i~--~g---~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~ 262 (543)
T 1nir_A 205 IDLWAKEPTKVAEIK--IG---IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQ 262 (543)
T ss_dssp EETTSSSCEEEEEEE--CC---SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEE
T ss_pred EECcCCCCcEEEEEe--cC---CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccce
Confidence 998 6655322111 12 3578999998 86678888632 2567778877776544
Q ss_pred eecC------------CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCc-EEE
Q 048181 194 LLRN------------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQT-FWE 260 (310)
Q Consensus 194 ~~~~------------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~-l~v 260 (310)
.... -..+.+|+++++++.+|++....++|+.+++...+.-..........|.++++++ +|+ +|+
T Consensus 263 ~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~sp--dg~~l~v 340 (543)
T 1nir_A 263 IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDS--SHRYFMT 340 (543)
T ss_dssp EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECT--TSCEEEE
T ss_pred eecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECC--CCCEEEE
Confidence 3321 1256799999999999999999999999998643211111122234699999999 997 677
Q ss_pred EEecCCCCCCCCceeeEEECC-CCcEEEEEec
Q 048181 261 AAIITRQPAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 261 a~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
+..... .+..+|. +|+++..+..
T Consensus 341 a~~~~~--------~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 341 AANNSN--------KVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEGGGT--------EEEEEETTTTEEEEEEEC
T ss_pred EecCCC--------eEEEEECCCCeEEEeecc
Confidence 765442 5666774 5777776664
No 102
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.19 E-value=3.9e-09 Score=92.56 Aligned_cols=176 Identities=12% Similarity=0.063 Sum_probs=109.4
Q ss_pred cceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECC--CceEEeeeecCCCCccccCCCccccCCCCCCceeeE
Q 048181 22 PTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAP--DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGL 99 (310)
Q Consensus 22 ~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~--g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gl 99 (310)
..++++++.+ +.-+|||+++++|.+++++-.+++++.+..+ +......... .. ....+.....-||
T Consensus 59 ~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~-------~~----~~~~~~N~g~EGL 126 (255)
T 3qqz_A 59 DLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIK-------IP----LQESPTNCGFEGL 126 (255)
T ss_dssp CEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEE-------CC----CSSCCCSSCCEEE
T ss_pred CEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeec-------cc----cccccccCCcceE
Confidence 3455677764 5679999999988866777778899877543 3222111100 00 0001122234699
Q ss_pred EEecCCCeEEEEeCC-C-cEEEEe--CCCCeEEEeecc-C-CCccccCccceEEeCCCCeEEEEcCCCccCccceeEeee
Q 048181 100 ALHYATRQLYIADAY-S-GLLVVG--PNGRLATQLATG-A-EGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNI 173 (310)
Q Consensus 100 a~d~~~g~LyVad~~-~-gi~~id--~~~~~~~~~~~~-~-~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~ 173 (310)
++|+..++||++... . .|+.++ +.+...+.+-.. . ....+.-+.++++||.+|++|+.....
T Consensus 127 A~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s------------ 194 (255)
T 3qqz_A 127 AYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES------------ 194 (255)
T ss_dssp EEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT------------
T ss_pred EEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC------------
Confidence 999777799997543 3 588887 222223322110 0 111344578999999999999875432
Q ss_pred ecCCCceEEEEcCCCCeEEEe---ec-------CCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 174 TNDSTGRLLSYNPRSSQVTVL---LR-------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 174 ~~~~~G~l~~~d~~~g~~~~~---~~-------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
..|+.+|.+ |++... .. .+..|.|||++++|+ |||+ +..+.+|+|...
T Consensus 195 -----~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 195 -----RALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp -----TEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEEC-
T ss_pred -----CeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEEec
Confidence 467777775 443322 11 246899999999997 8998 455799999753
No 103
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.19 E-value=4e-09 Score=96.51 Aligned_cols=152 Identities=12% Similarity=0.069 Sum_probs=94.5
Q ss_pred CCceeeEEEecCCC-eEEEEeCC-CcEEEEeCC-CCeEEEeeccCCCc-cccCccceEEeCCCCeEEEEcCCCccCccce
Q 048181 93 CRRTFGLALHYATR-QLYIADAY-SGLLVVGPN-GRLATQLATGAEGQ-AFHFLDGLDVDQGTGVVYFTDASGVYDFRTI 168 (310)
Q Consensus 93 ~~~P~Gla~d~~~g-~LyVad~~-~gi~~id~~-~~~~~~~~~~~~g~-~~~~pndvavd~~~G~lyvtd~~~~~~~~~~ 168 (310)
...|++++++ ++| .||+++.. ..|..++.+ +++...+.. .... +...|.+++++|++..+|+++....
T Consensus 144 ~~~~~~~~~s-pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~-~~~~~~g~~p~~~~~spdg~~l~v~~~~~~------ 215 (365)
T 1jof_A 144 NTGIHGMVFD-PTETYLYSADLTANKLWTHRKLASGEVELVGS-VDAPDPGDHPRWVAMHPTGNYLYALMEAGN------ 215 (365)
T ss_dssp TCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTSCEEEEEE-EECSSTTCCEEEEEECTTSSEEEEEETTTT------
T ss_pred CCcceEEEEC-CCCCEEEEEcCCCCEEEEEEECCCCCEEEeee-EecCCCCCCCCEeEECCCCCEEEEEECCCC------
Confidence 3578999998 566 58888865 458888876 666543321 1111 1245899999996337888864320
Q ss_pred eEeeeecCCCceEEEEcCCCCeEEE---eecCC-------C-------CCceeE-EccCCCEEEEEecCCC-----eEEE
Q 048181 169 VKLNITNDSTGRLLSYNPRSSQVTV---LLRNL-------T-------GPAGVA-ISVDSSFLLVSEFTGN-----RTLK 225 (310)
Q Consensus 169 ~~~~~~~~~~G~l~~~d~~~g~~~~---~~~~l-------~-------~pnGIa-~~~dg~~Lyv~d~~~~-----~I~~ 225 (310)
.=.++.+|..+++... ....+ . .|.+++ ++|||++||+++...+ +|..
T Consensus 216 ---------~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 216 ---------RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp ---------EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred ---------eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence 0134555655565431 11111 1 478999 9999999999987655 8998
Q ss_pred EEecCCCCCceee-----ecCCCCCceeeeCCCCC---C-cEEEEEecC
Q 048181 226 YWLRGPRANSFDI-----INFQAKPHNIKRNPGLL---Q-TFWEAAIIT 265 (310)
Q Consensus 226 ~~~~~~~~g~~~~-----~~l~g~Pdgl~~d~~~d---G-~l~va~~~~ 265 (310)
|+++. .|.... ......|.++++++ + | .||++....
T Consensus 287 ~~~~~--~g~~~~~~~~~~~~~~~~~~~a~sp--~~~dg~~l~v~~~~~ 331 (365)
T 1jof_A 287 FKLRD--CGSIEKQLFLSPTPTSGGHSNAVSP--CPWSDEWMAITDDQE 331 (365)
T ss_dssp EEECT--TSCEEEEEEEEECSSCCTTCCCEEE--CTTCTTEEEEECSSS
T ss_pred EEECC--CCCEEEeeeeeecCCCCcccceecC--CCcCCCEEEEEEcCC
Confidence 98862 243331 11233588888875 4 4 578886653
No 104
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.18 E-value=5e-08 Score=90.23 Aligned_cols=226 Identities=12% Similarity=-0.020 Sum_probs=125.3
Q ss_pred CCcceEEEccCCCEEEEEe----------CCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 34 FGGESIAFEPVGGAFYTGV----------ADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~----------~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
..| ++++++||+.+|+.. .++.|..++...... .+.. .+. ... .....|.++++
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~----------~~~--~~~-~~g~~p~~~~~ 132 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIEL----------PDA--PRF-DVGPYSWMNAN 132 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEEC----------CCc--ccc-ccCCCccceEE
Confidence 368 999999998777764 246688898863211 1111 000 000 11246889999
Q ss_pred ecCCCeEEEEeCC--CcEEEEeCCCCeEEEe-eccCCCccccCccc----eEEeCCCCeEEEEcCCCccC---------c
Q 048181 102 HYATRQLYIADAY--SGLLVVGPNGRLATQL-ATGAEGQAFHFLDG----LDVDQGTGVVYFTDASGVYD---------F 165 (310)
Q Consensus 102 d~~~g~LyVad~~--~gi~~id~~~~~~~~~-~~~~~g~~~~~pnd----vavd~~~G~lyvtd~~~~~~---------~ 165 (310)
++...+|||++.. +.|..|| +++++... .. ..+.....|.+ ++..+ +|.+.+-|...... .
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~-dg~~~~vd~~g~~~~~~~~~~~~~ 209 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPTCYHIHPGAPSTFYLLCA-QGGLAKTDHAGGAAGAGLVGAMLT 209 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCceEEEEeCCCceEEEEcC-CCCEEEEECCCcEEEEEecccccc
Confidence 8656679998753 4599999 88765322 21 11111111222 33444 24443333211000 0
Q ss_pred c-c--eeE--------eeeecCCCceEEEEcCCCCeEEEee----------cCCCCCce---eEEccCCCEEEEEec---
Q 048181 166 R-T--IVK--------LNITNDSTGRLLSYNPRSSQVTVLL----------RNLTGPAG---VAISVDSSFLLVSEF--- 218 (310)
Q Consensus 166 ~-~--~~~--------~~~~~~~~G~l~~~d~~~g~~~~~~----------~~l~~pnG---Ia~~~dg~~Lyv~d~--- 218 (310)
. . +.. ..+.....+.++.+|..++..+.+. .....|.| +++++|+++|||+..
T Consensus 210 ~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 210 AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 0 0 000 0001112456777777544322211 01114677 999999999999864
Q ss_pred ------CCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCc-EEEEEe-cCCCCCCCCceeeEEECC-CCcEEEE
Q 048181 219 ------TGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQT-FWEAAI-ITRQPAGTPVPIGQRISA-FGAVLDT 288 (310)
Q Consensus 219 ------~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~-l~va~~-~~~~~~~~~~~~v~~~~~-~G~~~~~ 288 (310)
..+.|+++|... ++.. ...+.+.|.+|++++ ||+ +|++.. .. ..|..+|. .++++..
T Consensus 290 ~~~~~~~~~~V~VID~~t---~~vv~~i~~g~~p~~i~~s~--Dg~~~l~v~~~~~--------~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLV---GQTSSQISLGHDVDAISVAQ--DGGPDLYALSAGT--------EVLHIYDAGAGDQDQS 356 (373)
T ss_pred cccccCCCCeEEEEECCC---CEEEEEEECCCCcCeEEECC--CCCeEEEEEcCCC--------CeEEEEECCCCCEEee
Confidence 246899999753 2221 133445799999999 998 544444 33 27888996 5888887
Q ss_pred E
Q 048181 289 I 289 (310)
Q Consensus 289 ~ 289 (310)
+
T Consensus 357 i 357 (373)
T 2mad_H 357 T 357 (373)
T ss_pred e
Confidence 4
No 105
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.17 E-value=4.2e-09 Score=91.40 Aligned_cols=161 Identities=16% Similarity=0.063 Sum_probs=112.3
Q ss_pred CceeeEEEecCCCeEEEEeCCC---cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeE
Q 048181 94 RRTFGLALHYATRQLYIADAYS---GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 94 ~~P~Gla~d~~~g~LyVad~~~---gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~ 170 (310)
..-.||.++ +++||++.... .|.++|++++++..-.. .+. -.+..+++++ +++||+.+..
T Consensus 21 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~--~~fgeGi~~~--~~~ly~ltw~---------- 83 (243)
T 3mbr_X 21 AFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAE-VPP--PYFGAGIVAW--RDRLIQLTWR---------- 83 (243)
T ss_dssp CCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCT--TCCEEEEEEE--TTEEEEEESS----------
T ss_pred cccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEe-CCC--CcceeEEEEe--CCEEEEEEee----------
Confidence 345699997 48999987653 49999999987643222 222 2345678887 4899998754
Q ss_pred eeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCC-CCceee-e-cCC-CCCc
Q 048181 171 LNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPR-ANSFDI-I-NFQ-AKPH 246 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~-~g~~~~-~-~l~-g~Pd 246 (310)
++.++.||+++.++..-..- .+.|.++++|++.||+++ .+++|+.+|...-+ .++.++ . +.+ ..+.
T Consensus 84 -------~~~v~v~D~~tl~~~~ti~~--~~~Gwglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lN 153 (243)
T 3mbr_X 84 -------NHEGFVYDLATLTPRARFRY--PGEGWALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLN 153 (243)
T ss_dssp -------SSEEEEEETTTTEEEEEEEC--SSCCCEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred -------CCEEEEEECCcCcEEEEEeC--CCCceEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccce
Confidence 37899999988776443332 236777778888999999 58899999865321 111222 1 111 2345
Q ss_pred eeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 247 NIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 247 gl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
.|.+. +|.||+..|.. ..+.++|| +|+++..|.+.
T Consensus 154 eLe~~---~G~lyanvw~s--------~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 154 ELEWV---NGELLANVWLT--------SRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EEEEE---TTEEEEEETTT--------TEEEEECTTTCBEEEEEECG
T ss_pred eeEEe---CCEEEEEECCC--------CeEEEEECCCCCEEEEEECC
Confidence 56665 58999999876 38999998 69999999976
No 106
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.16 E-value=2.2e-08 Score=89.32 Aligned_cols=192 Identities=11% Similarity=0.093 Sum_probs=121.0
Q ss_pred EEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCcEE
Q 048181 39 IAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLL 118 (310)
Q Consensus 39 ia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~gi~ 118 (310)
+++. +|. +|+...++.|+++++++.. .+.... .......++++ .+|+||++....+|+
T Consensus 103 ~~~~-~~~-l~v~t~~~~l~~~d~~g~~-~~~~~~------------------~~~~~~~~~~~-~~g~l~vgt~~~~l~ 160 (330)
T 3hxj_A 103 FTIF-EDI-LYVTSMDGHLYAINTDGTE-KWRFKT------------------KKAIYATPIVS-EDGTIYVGSNDNYLY 160 (330)
T ss_dssp EEEE-TTE-EEEECTTSEEEEECTTSCE-EEEEEC------------------SSCCCSCCEEC-TTSCEEEECTTSEEE
T ss_pred ceEE-CCE-EEEEecCCEEEEEcCCCCE-EEEEcC------------------CCceeeeeEEc-CCCEEEEEcCCCEEE
Confidence 4444 445 6667677889999887432 222110 01112345665 688999987667799
Q ss_pred EEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE-eecC
Q 048181 119 VVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV-LLRN 197 (310)
Q Consensus 119 ~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~-~~~~ 197 (310)
.+|++ ++...... .. ......+++++ +|++|++. . .|+++|+ +++... ....
T Consensus 161 ~~d~~-g~~~~~~~-~~---~~~~~~~~~d~-~g~l~v~t-~-------------------~l~~~d~-~g~~~~~~~~~ 213 (330)
T 3hxj_A 161 AINPD-GTEKWRFK-TN---DAITSAASIGK-DGTIYFGS-D-------------------KVYAINP-DGTEKWNFYAG 213 (330)
T ss_dssp EECTT-SCEEEEEE-CS---SCCCSCCEECT-TCCEEEES-S-------------------SEEEECT-TSCEEEEECCS
T ss_pred EECCC-CCEeEEEe-cC---CCceeeeEEcC-CCEEEEEe-C-------------------EEEEECC-CCcEEEEEccC
Confidence 99988 44322111 11 12356788888 59999975 2 4777774 343322 1222
Q ss_pred CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeE
Q 048181 198 LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQ 277 (310)
Q Consensus 198 l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~ 277 (310)
......++++++|+ ||++.. .+.|++++.++.. ..........+..+.++. +|+||++.... .+.
T Consensus 214 ~~~~~~~~~~~~g~-l~v~t~-~~gl~~~~~~g~~--~~~~~~~~~~~~~~~~~~--~g~l~v~t~~g---------gl~ 278 (330)
T 3hxj_A 214 YWTVTRPAISEDGT-IYVTSL-DGHLYAINPDGTE--KWRFKTGKRIESSPVIGN--TDTIYFGSYDG---------HLY 278 (330)
T ss_dssp SCCCSCCEECTTSC-EEEEET-TTEEEEECTTSCE--EEEEECSSCCCSCCEECT--TSCEEEECTTC---------EEE
T ss_pred CcceeceEECCCCe-EEEEcC-CCeEEEECCCCCE--eEEeeCCCCccccceEcC--CCeEEEecCCC---------CEE
Confidence 24568899999886 888754 6788888643321 111111123456688998 99999998764 699
Q ss_pred EECCCCcEEEEEecCCC
Q 048181 278 RISAFGAVLDTISFEAQ 294 (310)
Q Consensus 278 ~~~~~G~~~~~~~~p~~ 294 (310)
++|++|+.+..+..+..
T Consensus 279 ~~d~~g~~~~~~~~~~~ 295 (330)
T 3hxj_A 279 AINPDGTEKWNFETGSW 295 (330)
T ss_dssp EECTTSCEEEEEECSSC
T ss_pred EECCCCcEEEEEEcCCc
Confidence 99999999998888744
No 107
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=9.9e-09 Score=95.20 Aligned_cols=238 Identities=10% Similarity=-0.000 Sum_probs=140.6
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEe----------CCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCC
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGV----------ADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGP 91 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~----------~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~ 91 (310)
+.+++.. ..|. ++++|||+.+|+.. ..+.|..||...... .+... .|+ ...
T Consensus 72 ~~~I~vG---~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~---------~g~----r~~ 134 (386)
T 3sjl_D 72 IGMIDGG---FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELP---------DAP----RFL 134 (386)
T ss_dssp EEEEEEC---SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET---------TCC----CCC
T ss_pred EEEEECC---CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECC---------Ccc----ccc
Confidence 3445444 3575 99999998666654 245688998875321 22110 000 011
Q ss_pred CCCceeeEEEecCCCeEEEEeCC--CcEEEEeCCCCeEEEeeccCCCccccCccc----eEEeCCCCeEEEEcCCC--cc
Q 048181 92 ICRRTFGLALHYATRQLYIADAY--SGLLVVGPNGRLATQLATGAEGQAFHFLDG----LDVDQGTGVVYFTDASG--VY 163 (310)
Q Consensus 92 ~~~~P~Gla~d~~~g~LyVad~~--~gi~~id~~~~~~~~~~~~~~g~~~~~pnd----vavd~~~G~lyvtd~~~--~~ 163 (310)
....|.++++++...+|||++.. +.|..||.+++++..-.. ..+....+|.+ +++.++ |.+.+.+... ..
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v~g~~~~~P~g~~~~~~~~~D-G~~~~v~~~~~g~v 212 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-VPDCYHIFPTAPDTFFMHCRD-GSLAKVAFGTEGTP 212 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETT-SCEEEEECCSSSCC
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-CCCcceeecCCCceeEEECCC-CCEEEEECCCCCeE
Confidence 24579999998555579999863 459999999887532221 22222334555 477884 6665555432 11
Q ss_pred --------Ccc-ceeE----------eeeecCCCceEEEEcCCCCeEEEeecCC-----------CCCce---eEEccCC
Q 048181 164 --------DFR-TIVK----------LNITNDSTGRLLSYNPRSSQVTVLLRNL-----------TGPAG---VAISVDS 210 (310)
Q Consensus 164 --------~~~-~~~~----------~~~~~~~~G~l~~~d~~~g~~~~~~~~l-----------~~pnG---Ia~~~dg 210 (310)
... .... ..+.....|+++.+|..++.+++.. .. -.|.| +++++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~-~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP-AVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC-CEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeec-ceeccccccccccccCCCcceeeECCCC
Confidence 100 0000 0011122456677776544433221 11 12334 8999999
Q ss_pred CEEEEEec---------CCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCc--EEEEEecCCCCCCCCceeeEE
Q 048181 211 SFLLVSEF---------TGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQT--FWEAAIITRQPAGTPVPIGQR 278 (310)
Q Consensus 211 ~~Lyv~d~---------~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~--l~va~~~~~~~~~~~~~~v~~ 278 (310)
++|||+.. ..++|+.+|... ++..- ..+...|.+|+++. ||. ||++.+..+ .|..
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t---~kv~~~i~vg~~~~~lavs~--D~~~~ly~tn~~~~--------~VsV 358 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKT---GERLAKFEMGHEIDSINVSQ--DEKPLLYALSTGDK--------TLYI 358 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTT---CCEEEEEEEEEEECEEEECS--SSSCEEEEEETTTT--------EEEE
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCC---CeEEEEEECCCCcceEEECC--CCCeEEEEEcCCCC--------eEEE
Confidence 99999864 246899999854 22211 22333589999999 995 677776543 6888
Q ss_pred ECC-CCcEEEEEecCCC
Q 048181 279 ISA-FGAVLDTISFEAQ 294 (310)
Q Consensus 279 ~~~-~G~~~~~~~~p~~ 294 (310)
+|. .|+++..+..+..
T Consensus 359 iD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 359 HDAESGEELRSVNQLGH 375 (386)
T ss_dssp EETTTCCEEEEECCCCS
T ss_pred EECCCCcEEEEecCCCC
Confidence 895 7999999999854
No 108
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.11 E-value=2e-08 Score=101.24 Aligned_cols=205 Identities=10% Similarity=0.089 Sum_probs=137.2
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
...+++.|++|+ +|++...+.|+++++.++ .+.+.. . .........|+.| ++|+|||+..
T Consensus 408 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~----------------~-~~~~~~v~~i~~d-~~g~lwigt~ 468 (781)
T 3v9f_A 408 SVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIEL----------------E-KNELLDVRVFYED-KNKKIWIGTH 468 (781)
T ss_dssp BEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCS----------------T-TTCCCCEEEEEEC-TTSEEEEEET
T ss_pred ceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEecc----------------C-CCCCCeEEEEEEC-CCCCEEEEEC
Confidence 456788888888 566776778999998744 333210 0 0112345678887 7899999876
Q ss_pred CCcEEEEeCCCCeEEEeeccCC-CccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 114 YSGLLVVGPNGRLATQLATGAE-GQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~-g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
.||+++++++++.+.+..... .......++++.|+ +|+||++... +.|+++|+++++.+
T Consensus 469 -~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~------------------~Gl~~~~~~~~~~~ 528 (781)
T 3v9f_A 469 -AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFG------------------GGVGIYTPDMQLVR 528 (781)
T ss_dssp -TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESS------------------SCEEEECTTCCEEE
T ss_pred -CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEEEEcC------------------CCEEEEeCCCCeEE
Confidence 689999998876554432211 11235678899999 5999998642 24899998877766
Q ss_pred Eeec--CCC--CCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee----ecCCC-CCceeeeCCCCCCcEEEEEe
Q 048181 193 VLLR--NLT--GPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI----INFQA-KPHNIKRNPGLLQTFWEAAI 263 (310)
Q Consensus 193 ~~~~--~l~--~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~----~~l~g-~Pdgl~~d~~~dG~l~va~~ 263 (310)
.... ++. ..+.|+.+++|+ ||++-. .+-|.+|+... +..+. .+++. ...++..|+ +|+||++..
T Consensus 529 ~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~-~Glv~~~d~~~---~~~~~~~~~~gl~~~~i~~i~~d~--~g~lW~~t~ 601 (781)
T 3v9f_A 529 KFNQYEGFCSNTINQIYRSSKGQ-MWLATG-EGLVCFPSARN---FDYQVFQRKEGLPNTHIRAISEDK--NGNIWASTN 601 (781)
T ss_dssp EECTTTTCSCSCEEEEEECTTSC-EEEEET-TEEEEESCTTT---CCCEEECGGGTCSCCCCCEEEECS--SSCEEEECS
T ss_pred EccCCCCCCCCeeEEEEECCCCC-EEEEEC-CCceEEECCCC---CcEEEccccCCCCCceEEEEEECC--CCCEEEEcC
Confidence 6542 222 235788888887 888755 44338887643 22322 33442 345799999 999999975
Q ss_pred cCCCCCCCCceeeEEECCCCcEEEEEecCCCc
Q 048181 264 ITRQPAGTPVPIGQRISAFGAVLDTISFEAQY 295 (310)
Q Consensus 264 ~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~ 295 (310)
. .+.+++|+.+....+....|.
T Consensus 602 ~----------Gl~~~~~~~~~~~~~~~~dGl 623 (781)
T 3v9f_A 602 T----------GISCYITSKKCFYTYDHSNNI 623 (781)
T ss_dssp S----------CEEEEETTTTEEEEECGGGTC
T ss_pred C----------ceEEEECCCCceEEecccCCc
Confidence 4 488899988877887766554
No 109
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.11 E-value=1.1e-09 Score=100.70 Aligned_cols=154 Identities=15% Similarity=0.152 Sum_probs=101.1
Q ss_pred CCcceEEEcc--CC--CEEEEEeCC--C--eEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 34 FGGESIAFEP--VG--GAFYTGVAD--G--RILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 34 ~~Pegia~d~--~G--~l~~~d~~~--g--~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
..|-||.+.+ +| +||+++... . .|++++++++..++... .++ ....+|+.++++ ++
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~--------~~g-------~~~~~pND~~v~-~~ 175 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKT--------IRH-------KLLPSVNDIVAV-GP 175 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEE--------ECC-------TTCSSEEEEEEE-ET
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEec--------ccc-------CCCCCCceEEEe-CC
Confidence 3799999866 45 466666542 2 47888888665443311 111 346789999998 78
Q ss_pred CeEEEEeC-----------------CC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccc
Q 048181 106 RQLYIADA-----------------YS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRT 167 (310)
Q Consensus 106 g~LyVad~-----------------~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~ 167 (310)
|++|+++. .. +|+++++. +.+.+.. .+.+|||++++|++..+||+|+..
T Consensus 176 G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~-----~l~~pNGia~spDg~~lYvadt~~------ 242 (355)
T 3sre_A 176 EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE-----GFDFANGINISPDGKYVYIAELLA------ 242 (355)
T ss_dssp TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE-----EESSEEEEEECTTSSEEEEEEGGG------
T ss_pred CCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec-----CCcccCcceECCCCCEEEEEeCCC------
Confidence 99999864 11 38999874 4444432 467899999999644899999754
Q ss_pred eeEeeeecCCCceEEEEcCC-CCeEEE--eecCCCCCceeEEcc-CCCEEEEEe-cCCCeEEEEEe
Q 048181 168 IVKLNITNDSTGRLLSYNPR-SSQVTV--LLRNLTGPAGVAISV-DSSFLLVSE-FTGNRTLKYWL 228 (310)
Q Consensus 168 ~~~~~~~~~~~G~l~~~d~~-~g~~~~--~~~~l~~pnGIa~~~-dg~~Lyv~d-~~~~~I~~~~~ 228 (310)
++|++|+.+ ++++.. ...-...|+||++++ +|+ ||++. ....+|.+|+.
T Consensus 243 -----------~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 243 -----------HKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp -----------TEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCT
T ss_pred -----------CeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCc-EEEEecCCceEEEEECC
Confidence 467666642 233321 122235799999999 597 89965 34445555543
No 110
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.10 E-value=4.1e-08 Score=99.18 Aligned_cols=222 Identities=11% Similarity=0.096 Sum_probs=143.6
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEeC
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIADA 113 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad~ 113 (310)
..+++.|++|+ +|++..++.|.++++..+ ...+..... + ....-.......++.| .+|+ |||+..
T Consensus 359 V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~--------~---~~~~l~~~~v~~i~~d-~~g~~lWigt~ 425 (795)
T 4a2l_A 359 VSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQED--------E---SARGIGSNNIKAVYVD-EKKSLVYIGTH 425 (795)
T ss_dssp EEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC-----------------CCSCSCEEEEEEE-TTTTEEEEEET
T ss_pred eEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCC--------C---cccCCCCccEEEEEEc-CCCCEEEEEeC
Confidence 56788899998 667777778999998744 433321000 0 0000012345678887 7899 999877
Q ss_pred CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 114 YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
..||.++++++++.+.+.......+-.....++.|+ +|+||++.. +.|+++|+++++.+.
T Consensus 426 ~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~-------------------~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 426 AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL-------------------SALVRFNPEQRSFTT 485 (795)
T ss_dssp TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES-------------------SCEEEEETTTTEEEE
T ss_pred cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec-------------------CceeEEeCCCCeEEE
Confidence 778999999988776654321111224567888898 599999853 238899988777665
Q ss_pred eecC-----C--CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee---e-ecCC-CCCceeeeCCCCCCcEEEE
Q 048181 194 LLRN-----L--TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD---I-INFQ-AKPHNIKRNPGLLQTFWEA 261 (310)
Q Consensus 194 ~~~~-----l--~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~---~-~~l~-g~Pdgl~~d~~~dG~l~va 261 (310)
.... + ...+.|+.+++|+ ||++.. +.|++|+...... ... . ..++ .....|..|. +|+||++
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~--~g~lWig 559 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS--NGIIWVG 559 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT--TSCEEEE
T ss_pred ccccccccccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC--CCCEEEE
Confidence 4321 1 2346788999987 888765 5688998764321 111 0 1122 2345688899 9999999
Q ss_pred EecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEEec
Q 048181 262 AIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPF 306 (310)
Q Consensus 262 ~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~ 306 (310)
... .+.++|++......+....|..-..|.++++.
T Consensus 560 T~~----------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d 594 (795)
T 4a2l_A 560 TRE----------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILED 594 (795)
T ss_dssp ESS----------CEEEEETTTTEEEEECGGGTCSCSCEEEEEEC
T ss_pred eCC----------CceeECCCCCcEEEeCCCCCCchhheEEEEEC
Confidence 875 38889988776777765555433456666654
No 111
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=2.6e-08 Score=100.48 Aligned_cols=222 Identities=11% Similarity=0.087 Sum_probs=142.3
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
..++..|++|+ +|++...+.|.++++... ...+...... . ....-.......++.| ++|+|||+...
T Consensus 315 v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~-------~---~~~~l~~~~v~~i~~d-~~g~lWigt~~ 382 (781)
T 3v9f_A 315 ARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQ-------M---NESSLSNKVVSSVCDD-GQGKLWIGTDG 382 (781)
T ss_dssp EEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----C-------C---CSSCCSSSCEEEEEEC-TTSCEEEEEBS
T ss_pred EEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccc-------c---ccCCCCCcceEEEEEc-CCCCEEEEeCC
Confidence 45788999998 677777778999988743 3333110000 0 0000112345678887 78999998766
Q ss_pred CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe
Q 048181 115 SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL 194 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~ 194 (310)
.||.+++++++..+.+.. .....-.....++.|+ +|+||++... +.|+++++.+++.+..
T Consensus 383 ~Gl~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~-~g~lWigt~~------------------~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 383 GGINVFENGKRVAIYNKE-NRELLSNSVLCSLKDS-EGNLWFGTYL------------------GNISYYNTRLKKFQII 442 (781)
T ss_dssp SCEEEEETTEEEEECC------CCCSBEEEEEECT-TSCEEEEETT------------------EEEEEECSSSCEEEEC
T ss_pred CcEEEEECCCCeEEEccC-CCCCCCcceEEEEECC-CCCEEEEecc------------------CCEEEEcCCCCcEEEe
Confidence 789999988755443321 1111224466888898 5999997532 4599999887777665
Q ss_pred ecC---CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ec-----C-CCCCceeeeCCCCCCcEEEEEec
Q 048181 195 LRN---LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-IN-----F-QAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 195 ~~~---l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~-----l-~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
... ......|+.+++|+ ||++-. +.|++|+.... ..+. .. + ......|+.|+ +|+||++...
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~-lwigt~--~Gl~~~~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~--~g~lWigt~~ 514 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKK-IWIGTH--AGVFVIDLASK---KVIHHYDTSNSQLLENFVRSIAQDS--EGRFWIGTFG 514 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSE-EEEEET--TEEEEEESSSS---SCCEEECTTTSSCSCSCEEEEEECT--TCCEEEEESS
T ss_pred ccCCCCCCeEEEEEECCCCC-EEEEEC--CceEEEeCCCC---eEEecccCcccccccceeEEEEEcC--CCCEEEEEcC
Confidence 421 12446788888875 888765 67999987542 2221 11 1 13467799999 9999999875
Q ss_pred CCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEEec
Q 048181 265 TRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPF 306 (310)
Q Consensus 265 ~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~ 306 (310)
. .+.+++++++....+..+.+..-..|..+.+.
T Consensus 515 ~---------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d 547 (781)
T 3v9f_A 515 G---------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRS 547 (781)
T ss_dssp S---------CEEEECTTCCEEEEECTTTTCSCSCEEEEEEC
T ss_pred C---------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEEC
Confidence 4 48889998777777765554433467777663
No 112
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.10 E-value=2.3e-08 Score=88.84 Aligned_cols=159 Identities=9% Similarity=-0.019 Sum_probs=100.1
Q ss_pred CEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-eEEEEeCCC-cEEEEeCC
Q 048181 46 GAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-QLYIADAYS-GLLVVGPN 123 (310)
Q Consensus 46 ~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~LyVad~~~-gi~~id~~ 123 (310)
.++++...++.|..++...+...-... .......|.+++++ ++| .+|+++... .|..+|..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~----------------~~~~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT----------------IADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE----------------CTTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE----------------cCCCCCCccceEEc-CCCCEEEEEeCCCCeEEEEECC
Confidence 356777788999999987543221100 00001158899997 555 788887654 49999998
Q ss_pred CCeEEEeecc-CCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCc
Q 048181 124 GRLATQLATG-AEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPA 202 (310)
Q Consensus 124 ~~~~~~~~~~-~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pn 202 (310)
+++....... ..+.....|.++++++++..+|+++.........+ ...++.|+.+|..+++.......-..|+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~------~~~~~~i~v~d~~~~~~~~~~~~~~~~~ 138 (337)
T 1pby_B 65 TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF------EVQPTRVALYDAETLSRRKAFEAPRQIT 138 (337)
T ss_dssp TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE------EECCCEEEEEETTTTEEEEEEECCSSCC
T ss_pred CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc------cccCceEEEEECCCCcEEEEEeCCCCcc
Confidence 7765332221 11111235789999996337888863210000000 0024789999998877655554455789
Q ss_pred eeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 203 GVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 203 GIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+++++|||++||++ .+.|+.+++..
T Consensus 139 ~~~~s~dg~~l~~~---~~~i~~~d~~~ 163 (337)
T 1pby_B 139 MLAWARDGSKLYGL---GRDLHVMDPEA 163 (337)
T ss_dssp CEEECTTSSCEEEE---SSSEEEEETTT
T ss_pred eeEECCCCCEEEEe---CCeEEEEECCC
Confidence 99999999999998 47799998764
No 113
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.09 E-value=8.8e-08 Score=93.44 Aligned_cols=199 Identities=8% Similarity=0.035 Sum_probs=123.0
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECC-CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAP-DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
+.+++.. ..|+++++++||+.+|+...++.|..++.. .+.+.+.. ......|.+++++
T Consensus 190 ~~~i~~g---~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~------------------i~~G~~P~~ia~s 248 (567)
T 1qks_A 190 KTVLDTG---YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE------------------IKIGSEARSIETS 248 (567)
T ss_dssp EEEEECS---SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE------------------EECCSEEEEEEEC
T ss_pred EEEEeCC---CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE------------------EecCCCCceeEEc
Confidence 3344444 368999999999988888888999999984 12221111 1234579999997
Q ss_pred c----CCCeEEEEeCC-CcEEEEeCCCCeEEEeecc----CCC---ccccCccceEEeCCCCeEEEEcCCCccCccceeE
Q 048181 103 Y----ATRQLYIADAY-SGLLVVGPNGRLATQLATG----AEG---QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 103 ~----~~g~LyVad~~-~gi~~id~~~~~~~~~~~~----~~g---~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~ 170 (310)
+ ....+||++.. ..+..+|..+.+....... .++ .+-..+..+..+++...+|++.
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~------------ 316 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV------------ 316 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE------------
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe------------
Confidence 2 44579998765 4588899887654322211 111 0111334566666423334432
Q ss_pred eeeecCCCceEEEEcCCCCe-EE-EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-eecC-CCCC-
Q 048181 171 LNITNDSTGRLLSYNPRSSQ-VT-VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-IINF-QAKP- 245 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~-~~-~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~l-~g~P- 245 (310)
...|+|+.+|..+.+ .. ..+..-.+|.++.|+|||+++|++....++|..+|... ++.. .... ...|
T Consensus 317 -----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t---~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 317 -----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE---GKLVAIEDTGGQTPH 388 (567)
T ss_dssp -----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSSBC
T ss_pred -----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC---CcEEEEEeccCcCCC
Confidence 335889888865432 11 11233457889999999999999999999999998863 3221 1222 1223
Q ss_pred --ceee-eCCCCC-CcEEEEEecC
Q 048181 246 --HNIK-RNPGLL-QTFWEAAIIT 265 (310)
Q Consensus 246 --dgl~-~d~~~d-G~l~va~~~~ 265 (310)
.|.. +++ + |.+|++....
T Consensus 389 pg~g~~~~~p--~~g~v~~t~~~g 410 (567)
T 1qks_A 389 PGRGANFVHP--TFGPVWATSHMG 410 (567)
T ss_dssp CTTCEEEEET--TTEEEEEEEBSS
T ss_pred CccceeeECC--CCCcEEEeCCCC
Confidence 3665 466 5 6899876543
No 114
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.09 E-value=1.6e-08 Score=93.42 Aligned_cols=214 Identities=11% Similarity=-0.098 Sum_probs=128.7
Q ss_pred CCEEEEEeCCC----eEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC-------
Q 048181 45 GGAFYTGVADG----RILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA------- 113 (310)
Q Consensus 45 G~l~~~d~~~g----~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~------- 113 (310)
..+|+++...+ +|..||.+..... .. .+....| |+++++..+++||++.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~-~~------------------i~vG~~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTL-GH------------------SLGAFLS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEE-EE------------------EEECTTC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCCCeEE-EE------------------EeCCCCC-ceEECCCCCEEEEEccccccccc
Confidence 35566665555 8889998854321 10 1233468 9999866678999973
Q ss_pred ---CCcEEEEeCCCCeEEEeeccCCCcc---ccCccceEEeCCCCeEEEEcCC--Cc-----cCccceeEe---------
Q 048181 114 ---YSGLLVVGPNGRLATQLATGAEGQA---FHFLDGLDVDQGTGVVYFTDAS--GV-----YDFRTIVKL--------- 171 (310)
Q Consensus 114 ---~~gi~~id~~~~~~~~~~~~~~g~~---~~~pndvavd~~~G~lyvtd~~--~~-----~~~~~~~~~--------- 171 (310)
.+.|.+||+.+++...-.....++. ...|.+++++|++..+||++.. .. .+... ...
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v~~i~v~~~~~~ 170 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-DQLTKSASCFHI 170 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-EEEEECSSCCCC
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-ceEEECCCceEE
Confidence 1239999999876532221111111 2568999999975689999753 11 12211 000
Q ss_pred -------eeecCCCceEEEEcCCC-----CeE-----------------------------------------EEeec--
Q 048181 172 -------NITNDSTGRLLSYNPRS-----SQV-----------------------------------------TVLLR-- 196 (310)
Q Consensus 172 -------~~~~~~~G~l~~~d~~~-----g~~-----------------------------------------~~~~~-- 196 (310)
.....++|++..+|.++ +++ +....
T Consensus 171 ~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~ 250 (368)
T 1mda_H 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAID 250 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCC
T ss_pred ccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEE
Confidence 01122344444444433 111 11100
Q ss_pred --------CCCCCce---eEEccCCCEEEEEec---C-----CCeEEEEEecCCCCCceeeecC--CCCCceeeeCCCCC
Q 048181 197 --------NLTGPAG---VAISVDSSFLLVSEF---T-----GNRTLKYWLRGPRANSFDIINF--QAKPHNIKRNPGLL 255 (310)
Q Consensus 197 --------~l~~pnG---Ia~~~dg~~Lyv~d~---~-----~~~I~~~~~~~~~~g~~~~~~l--~g~Pdgl~~d~~~d 255 (310)
....|.| +++++||++|||+.. . ...+..+|.... +. +..+ ...|+||++++ |
T Consensus 251 ~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---~v-v~~i~vg~~p~gi~~s~--D 324 (368)
T 1mda_H 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---QT-SGPISNGHDSDAIIAAQ--D 324 (368)
T ss_dssp SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---CE-EECCEEEEEECEEEECC--S
T ss_pred eccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---eE-EEEEECCCCcceEEECC--C
Confidence 0113556 999999999999865 3 345668887532 11 1222 34699999999 9
Q ss_pred Cc-EEEEEe-cCCCCCCCCceeeEEECC-CCcEEEEEecCC
Q 048181 256 QT-FWEAAI-ITRQPAGTPVPIGQRISA-FGAVLDTISFEA 293 (310)
Q Consensus 256 G~-l~va~~-~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~ 293 (310)
|. +|++.. ..+ .|..+|. .++++..+....
T Consensus 325 g~~l~va~~~~~~--------~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 325 GASDNYANSAGTE--------VLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp SSCEEEEEETTTT--------EEEEEESSSCEEEEECCCCS
T ss_pred CCEEEEEccCCCC--------eEEEEECCCCcEEEEEECCC
Confidence 96 899988 443 7888895 699999987653
No 115
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.08 E-value=4.5e-08 Score=98.88 Aligned_cols=205 Identities=9% Similarity=0.081 Sum_probs=134.8
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
...+++.|++|+++|++...+.|+++++.++ ...+.... ..........++.| ++|+||++..
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~---------------~~l~~~~v~~i~~d-~~g~lwigt~ 470 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN---------------SQLVNENVYAILPD-GEGNLWLGTL 470 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT---------------SCCSCSCEEEEEEC-SSSCEEEEES
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC---------------CCcCCCeeEEEEEC-CCCCEEEEec
Confidence 3557888989985677777788999998754 33332100 00112345678887 7899999876
Q ss_pred CCcEEEEeCCCCeEEEeeccC--CCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 114 YSGLLVVGPNGRLATQLATGA--EGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~--~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.||+++++++++.+.+.... .+..-...+.+..|+ +|++|++.. +.|+++|+++++.
T Consensus 471 -~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~-------------------~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 471 -SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGE-------------------EGLSVFKQEGLDI 529 (795)
T ss_dssp -SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEES-------------------SCEEEEEEETTEE
T ss_pred -CceeEEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeC-------------------CceEEEeCCCCeE
Confidence 68999999988766553221 111224567889998 599999864 2377777766655
Q ss_pred EEee-----cCC--CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee----ecCCC-CCceeeeCCCCCCcEE
Q 048181 192 TVLL-----RNL--TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI----INFQA-KPHNIKRNPGLLQTFW 259 (310)
Q Consensus 192 ~~~~-----~~l--~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~----~~l~g-~Pdgl~~d~~~dG~l~ 259 (310)
... ..+ ...+.|+.+++|+ ||++-.. .|++|+... +..+. .+++. ...+|..|+ +|+||
T Consensus 530 -~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~~--Gl~~~d~~~---~~~~~~~~~~gl~~~~i~~i~~d~--~g~lW 600 (795)
T 4a2l_A 530 -QKASILPVSNVTKLFTNCIYEASNGI-IWVGTRE--GFYCFNEKD---KQIKRYNTTNGLPNNVVYGILEDS--FGRLW 600 (795)
T ss_dssp -EECCCSCSCGGGGSCEEEEEECTTSC-EEEEESS--CEEEEETTT---TEEEEECGGGTCSCSCEEEEEECT--TSCEE
T ss_pred -EEecCCCCCCCCCCeeEEEEECCCCC-EEEEeCC--CceeECCCC---CcEEEeCCCCCCchhheEEEEECC--CCCEE
Confidence 221 112 2346788899987 8887553 688898653 33322 23331 234588999 99999
Q ss_pred EEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCc
Q 048181 260 EAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQY 295 (310)
Q Consensus 260 va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~ 295 (310)
++... .+.+++|+.+....+....|.
T Consensus 601 i~t~~----------Gl~~~~~~~~~~~~~~~~dGl 626 (795)
T 4a2l_A 601 LSTNR----------GISCFNPETEKFRNFTESDGL 626 (795)
T ss_dssp EEETT----------EEEEEETTTTEEEEECGGGTC
T ss_pred EEcCC----------ceEEEcCCCCcEEEcCCcCCC
Confidence 99853 588999987777777766554
No 116
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.08 E-value=9.1e-09 Score=92.04 Aligned_cols=160 Identities=12% Similarity=0.029 Sum_probs=109.1
Q ss_pred eEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEeeeec
Q 048181 98 GLALHYATRQLYIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
|+++. .++++|++.... .|..+|.++++....... . ....|.+++++++ | .+|+++..
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~--~~~~~~~~~~s~d-g~~~~v~~~~--------------- 63 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-P--DKFGPGTAMMAPD-NRTAYVLNNH--------------- 63 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEEC-S--SCCSSCEEEECTT-SSEEEEEETT---------------
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEec-C--CCCCCceeEECCC-CCEEEEEeCC---------------
Confidence 55664 678899886554 499999988765432221 1 1124789999995 6 58888643
Q ss_pred CCCceEEEEcCCCCeEEEeecC-------CCCCceeEEccCCCEEEEEecC-----------CCeEEEEEecCCCCCc-e
Q 048181 176 DSTGRLLSYNPRSSQVTVLLRN-------LTGPAGVAISVDSSFLLVSEFT-----------GNRTLKYWLRGPRANS-F 236 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~~~-------l~~pnGIa~~~dg~~Lyv~d~~-----------~~~I~~~~~~~~~~g~-~ 236 (310)
++.|+.+|..+++....... ...|++++++|||++||++... .++|+.+++....... .
T Consensus 64 --~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 141 (349)
T 1jmx_B 64 --YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV 141 (349)
T ss_dssp --TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS
T ss_pred --CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee
Confidence 36899999887776543332 2238999999999999998854 6799999986421111 1
Q ss_pred eeecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 237 DIINFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 237 ~~~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
.....+..+.++++++ ||++|++ .. .+.++|. +|+++..+...
T Consensus 142 ~~~~~~~~~~~~~~s~--dg~l~~~--~~---------~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 142 RTFPMPRQVYLMRAAD--DGSLYVA--GP---------DIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp EEEECCSSCCCEEECT--TSCEEEE--SS---------SEEEECTTTCCEEEEECST
T ss_pred eeccCCCcccceeECC--CCcEEEc--cC---------cEEEEeCCCCceecccccc
Confidence 1123344578888999 9998884 21 4788886 58888777654
No 117
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.02 E-value=4e-08 Score=92.43 Aligned_cols=199 Identities=11% Similarity=0.008 Sum_probs=108.4
Q ss_pred cCCCEEEE-EeCC----CeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC----
Q 048181 43 PVGGAFYT-GVAD----GRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA---- 113 (310)
Q Consensus 43 ~~G~l~~~-d~~~----g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~---- 113 (310)
++++.+|+ +... +.|..||.+..... .. .+....| |++++++..+|||++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv-~~------------------I~vG~~P-gia~SpDgk~lyVan~~~~~ 141 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL-GM------------------TDGGFLP-HPVAAEDGSFFAQASTVFER 141 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE-EE------------------EEECSSC-EEEECTTSSCEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE-EE------------------EECCCCC-ceEECCCCCEEEEEeccccc
Confidence 35554444 4432 69999998854322 10 1233468 9999866667999984
Q ss_pred ------CCcEEEEeCCCCeEEEeeccCCCcc---ccCccceEEeCCCCeEEEEcCC-Cc----cCccc--eeEe------
Q 048181 114 ------YSGLLVVGPNGRLATQLATGAEGQA---FHFLDGLDVDQGTGVVYFTDAS-GV----YDFRT--IVKL------ 171 (310)
Q Consensus 114 ------~~gi~~id~~~~~~~~~~~~~~g~~---~~~pndvavd~~~G~lyvtd~~-~~----~~~~~--~~~~------ 171 (310)
.+.|.+||..++++..-......+. ...|.++++++++.++||++.. .. ++... ....
T Consensus 142 ~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~ 221 (426)
T 3c75_H 142 IARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC 221 (426)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE
T ss_pred cccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc
Confidence 2249999999876532211110111 2568999999976689998753 11 00000 0000
Q ss_pred ----------eeecCCCceEEEEcCCCCeEEEe----ecCCCCC--ceeEEccCCCEEEEEecCCCeEEEEEecCCCCC-
Q 048181 172 ----------NITNDSTGRLLSYNPRSSQVTVL----LRNLTGP--AGVAISVDSSFLLVSEFTGNRTLKYWLRGPRAN- 234 (310)
Q Consensus 172 ----------~~~~~~~G~l~~~d~~~g~~~~~----~~~l~~p--nGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g- 234 (310)
.+...++|++..++..++++... .+--..| ..++++++++.+|++.. .++|+.++..+....
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v 300 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATF 300 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEE
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEE
Confidence 01223456666666544444321 1111122 34566888777777643 567888887542110
Q ss_pred --ceeee---cC--CCCCce---eeeCCCCCC-cEEEEEec
Q 048181 235 --SFDII---NF--QAKPHN---IKRNPGLLQ-TFWEAAII 264 (310)
Q Consensus 235 --~~~~~---~l--~g~Pdg---l~~d~~~dG-~l~va~~~ 264 (310)
..++. .+ ...|.| +++++ +| .+||+...
T Consensus 301 ~~~~~~~~~~~i~~g~~p~g~~~va~s~--dg~rlyVa~~~ 339 (426)
T 3c75_H 301 RAPIEALTEAERADDWRPGGWQQTAYHR--QSDRIYLLVDQ 339 (426)
T ss_dssp CCCEESSCTTTGGGTEEECSSSCEEEEG--GGTEEEEEEEE
T ss_pred eeeeeeccccccccccccCCceeeEEcC--CCCEEEEEecc
Confidence 01100 00 012444 89998 76 68999763
No 118
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.01 E-value=2.8e-07 Score=84.54 Aligned_cols=223 Identities=12% Similarity=0.037 Sum_probs=128.4
Q ss_pred CCcceEEEccCCCEEEEEe----------CCCeEEEEECCCc-e-EEeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 34 FGGESIAFEPVGGAFYTGV----------ADGRILKYQAPDG-F-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~----------~~g~I~r~~~~g~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
..| ++++++||+.+|+.. .++.|..++.... . ..+..... .......|.++++
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~--------------~~~~g~~p~~i~~ 115 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK--------------RVQGLNYDGLFRQ 115 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT--------------BCCBCCCGGGEEE
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc--------------ccccCCCcceEEE
Confidence 368 999999998777765 2456889987642 2 12211000 0012357999999
Q ss_pred ecCCCeEEEEeCC--CcEEEEeCCCCeEEEe-eccCCCc--cccCccc----eEEeCCCCeEE-EEcCC-Cc--------
Q 048181 102 HYATRQLYIADAY--SGLLVVGPNGRLATQL-ATGAEGQ--AFHFLDG----LDVDQGTGVVY-FTDAS-GV-------- 162 (310)
Q Consensus 102 d~~~g~LyVad~~--~gi~~id~~~~~~~~~-~~~~~g~--~~~~pnd----vavd~~~G~ly-vtd~~-~~-------- 162 (310)
++....||+++.. ..|..+|.++++.... .. ..+. ...+|++ ++++++ |.+. ++-.. ..
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~~~~v~~~p~~~~~~~~~~~d-g~~~~v~~~~~g~~~~~~~~~ 193 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAGCWSVIPQPNRPRSFMTICGD-GGLLTINLGEDGKVASQSRSK 193 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTTEEEEEECTTSSSEEEEEETT-SSEEEEEECTTSSEEEEEECC
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCCcceeEEcCCCCeeEEEECCC-CcEEEEEECCCCcEeeecccc
Confidence 8555579999754 3599999988764322 11 1111 1124444 677774 6544 33211 11
Q ss_pred --cCccc-ee--------EeeeecCCCceEEEEcCCCCeEEEeec----------CCCCCce---eEEccCCCEEEEEec
Q 048181 163 --YDFRT-IV--------KLNITNDSTGRLLSYNPRSSQVTVLLR----------NLTGPAG---VAISVDSSFLLVSEF 218 (310)
Q Consensus 163 --~~~~~-~~--------~~~~~~~~~G~l~~~d~~~g~~~~~~~----------~l~~pnG---Ia~~~dg~~Lyv~d~ 218 (310)
+.... .. .........|+++.+|..++..+.... ....|.| +++++|++++||+..
T Consensus 194 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~ 273 (361)
T 2oiz_A 194 QMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMH 273 (361)
T ss_dssp CCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEE
T ss_pred ceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEc
Confidence 00000 00 001112235678888865443332210 0012455 999999999999865
Q ss_pred ----------CCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEECC-CC--
Q 048181 219 ----------TGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRISA-FG-- 283 (310)
Q Consensus 219 ----------~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~-~G-- 283 (310)
..++|+.+++.. ++..- ..... |.+|++++ ||+ ||++.. . .|..+|. .|
T Consensus 274 ~~~~~~~~~~~~~~v~viD~~t---~~~v~~i~~~~-p~~ia~sp--dg~~l~v~n~-~---------~v~v~D~~t~~l 337 (361)
T 2oiz_A 274 PDGKEGTHKFPAAEIWVMDTKT---KQRVARIPGRD-ALSMTIDQ--QRNLMLTLDG-G---------NVNVYDISQPEP 337 (361)
T ss_dssp SSCCTTCTTCCCSEEEEEETTT---TEEEEEEECTT-CCEEEEET--TTTEEEEECS-S---------CEEEEECSSSSC
T ss_pred cCCCcccccCCCceEEEEECCC---CcEEEEEecCC-eeEEEECC--CCCEEEEeCC-C---------eEEEEECCCCcc
Confidence 245899999753 22211 33345 99999999 996 676664 2 5888885 58
Q ss_pred cEEEEE
Q 048181 284 AVLDTI 289 (310)
Q Consensus 284 ~~~~~~ 289 (310)
+++..+
T Consensus 338 ~~~~~i 343 (361)
T 2oiz_A 338 KLLRTI 343 (361)
T ss_dssp EEEEEE
T ss_pred eeeEEe
Confidence 888776
No 119
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.99 E-value=2.7e-07 Score=85.19 Aligned_cols=190 Identities=8% Similarity=0.047 Sum_probs=115.1
Q ss_pred CCCceeeEEEecCCCeEEEEeCC-------------C---cEEEEeCCCC--eEE-Ee--eccCCCccccCccceEEe-C
Q 048181 92 ICRRTFGLALHYATRQLYIADAY-------------S---GLLVVGPNGR--LAT-QL--ATGAEGQAFHFLDGLDVD-Q 149 (310)
Q Consensus 92 ~~~~P~Gla~d~~~g~LyVad~~-------------~---gi~~id~~~~--~~~-~~--~~~~~g~~~~~pndvavd-~ 149 (310)
..-...++.+| ..|+|||.|.+ . .|+.+|++++ ++. ++ ..... .+-.+.||++|| .
T Consensus 85 ~lvsV~~v~iD-~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~-~~~S~l~di~VD~~ 162 (381)
T 3q6k_A 85 ELTSIYQPVID-DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLV-EKPTYFGGFAVDVA 162 (381)
T ss_dssp SSSCEEEEEEC-TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGC-CCGGGEEEEEEEES
T ss_pred ceEEeeEEEEc-CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhc-ccCCccceEEEecc
Confidence 34567899998 79999999964 1 2889999987 543 22 11111 234678999999 2
Q ss_pred C------CCeEEEEcCCCccCccceeEeeeecCCCceEEEEc-----CCCCeEEEeecC-----CCCCceeEEccC----
Q 048181 150 G------TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYN-----PRSSQVTVLLRN-----LTGPAGVAISVD---- 209 (310)
Q Consensus 150 ~------~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d-----~~~g~~~~~~~~-----l~~pnGIa~~~d---- 209 (310)
+ ++.+|+||.... .-.+ -...+|+-+|+- ++ ........+ ....+|||+||+
T Consensus 163 ~~~~~c~~~~aYItD~~~~---gLIV----ydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~ 234 (381)
T 3q6k_A 163 NPKGDCSETFVYITNFLRG---ALFI----YDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGITLGDRDSEG 234 (381)
T ss_dssp CTTTTSCSEEEEEEETTTT---EEEE----EETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEEEECCCCTTS
T ss_pred cCCCCCCccEEEEEcCCCC---cEEE----EECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEEEecCCcCCC
Confidence 1 488999998531 0000 111233334432 11 001111111 135689999998
Q ss_pred CCEEEEEecCCCeEEEEEec---CCC-CCceeeecCCC-CCc--eeeeC-CCCCCcEEEEEecCCCCCCCCceeeEEECC
Q 048181 210 SSFLLVSEFTGNRTLKYWLR---GPR-ANSFDIINFQA-KPH--NIKRN-PGLLQTFWEAAIITRQPAGTPVPIGQRISA 281 (310)
Q Consensus 210 g~~Lyv~d~~~~~I~~~~~~---~~~-~g~~~~~~l~g-~Pd--gl~~d-~~~dG~l~va~~~~~~~~~~~~~~v~~~~~ 281 (310)
+++||+.-..+.+++++..+ .+. ...++..+-.+ ..+ ++++| . +|+||.+..... .|.++++
T Consensus 235 ~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~--~G~ly~~~~~~~--------aI~~w~~ 304 (381)
T 3q6k_A 235 NRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPK--TKVIFFAEANTK--------QVSCWNT 304 (381)
T ss_dssp CCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTT--TCEEEEEESSSS--------EEEEEET
T ss_pred CeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCC--CCeEEEEeccCC--------eEEEEeC
Confidence 89999999999999999842 211 11222211112 245 46786 7 899999998764 7889998
Q ss_pred CC------cEEEEEecCCCccccceeEEE
Q 048181 282 FG------AVLDTISFEAQYSTTPISEVQ 304 (310)
Q Consensus 282 ~G------~~~~~~~~p~~~~~~~~t~~~ 304 (310)
++ +....++.| .. .-++++.
T Consensus 305 ~~~~~~~~n~~~l~~d~-~l--~~pd~~~ 330 (381)
T 3q6k_A 305 QKMPLRMKNTDVVYTSS-RF--VFGTDIS 330 (381)
T ss_dssp TSCSBCGGGEEEEEECT-TC--CSEEEEE
T ss_pred CCCccccCceEEEEECC-Cc--cccCeEE
Confidence 87 335555665 32 3444444
No 120
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=6.9e-08 Score=93.57 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=125.4
Q ss_pred CCC-EEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEe--cCCCeEEEEeC------
Q 048181 44 VGG-AFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH--YATRQLYIADA------ 113 (310)
Q Consensus 44 ~G~-l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d--~~~g~LyVad~------ 113 (310)
||+ +|+.+..+++|.+++.+.... .+. ..+....|.|+++. ++.+.+|++..
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii------------------~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~ 161 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAIL------------------EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLV 161 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEE------------------ECSSCCSEEEEEECCSSBCSEEEEEECSCEESS
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEE------------------eCCCCCCCcceeeeecCCCcEEEEecccccccC
Confidence 665 555566789999999985321 111 02345679999983 45788998841
Q ss_pred -----------CC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccC---------ccceeEee
Q 048181 114 -----------YS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYD---------FRTIVKLN 172 (310)
Q Consensus 114 -----------~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~---------~~~~~~~~ 172 (310)
.. .+..||.++.++..-.. ..+ .|.+++++++++.+|+|....... ..++..-.
T Consensus 162 ~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~-Vgg----~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~ 236 (595)
T 1fwx_A 162 NDGTNMEDVANYVNVFTAVDADKWEVAWQVL-VSG----NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVF 236 (595)
T ss_dssp CSSSSTTCGGGEEEEEEEEETTTTEEEEEEE-ESS----CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEE
T ss_pred CCCcccccccccCceEEEEECCCCeEEEEEE-eCC----CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEe
Confidence 11 27788988765421111 122 478999999877888887543110 00110000
Q ss_pred -----eecCC------CceEEEEcCCC--CeE-EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCC---CCc
Q 048181 173 -----ITNDS------TGRLLSYNPRS--SQV-TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPR---ANS 235 (310)
Q Consensus 173 -----~~~~~------~G~l~~~d~~~--g~~-~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~---~g~ 235 (310)
.+..+ -+.+..+|..+ +++ ...+.--..|.|+.++|||+++||++...++|.+|+++..+ .+.
T Consensus 237 ~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 237 NIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp EHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred eccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc
Confidence 00000 14588899876 433 22233335899999999999999999999999999987311 011
Q ss_pred e----ee-ecCC--CCCceeeeCCCCCCcEEEEEecCC
Q 048181 236 F----DI-INFQ--AKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 236 ~----~~-~~l~--g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
. .+ ..++ ..|.++++++ +|++|++.....
T Consensus 317 l~~~~~v~~~v~vG~gP~h~aF~~--dG~aY~t~~lds 352 (595)
T 1fwx_A 317 ADPRSAVVAEPELGLGPLHTAFDG--RGNAYTSLFLDS 352 (595)
T ss_dssp CCGGGGEEECCBCCSCEEEEEECT--TSEEEEEETTTT
T ss_pred cCcccceEEEcCCCCCcceEEECC--CCeEEEEEecCC
Confidence 1 11 2222 3699999999 999999998763
No 121
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.97 E-value=5.5e-09 Score=100.42 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=86.3
Q ss_pred CCCCceeeEEEecCCCeEEEEeCC---------------------Cc-EEEEeCCCCe-------EEEeec--cC-----
Q 048181 91 PICRRTFGLALHYATRQLYIADAY---------------------SG-LLVVGPNGRL-------ATQLAT--GA----- 134 (310)
Q Consensus 91 ~~~~~P~Gla~d~~~g~LyVad~~---------------------~g-i~~id~~~~~-------~~~~~~--~~----- 134 (310)
....+|-++++++.+|++|++-.. .| |+++.++++. ...++. ..
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 345689999998779999998431 13 8888764321 122221 10
Q ss_pred ----------CCccccCccceEEeCCCCeEEE-EcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecC--CCCC
Q 048181 135 ----------EGQAFHFLDGLDVDQGTGVVYF-TDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRN--LTGP 201 (310)
Q Consensus 135 ----------~g~~~~~pndvavd~~~G~lyv-td~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~--l~~p 201 (310)
.+.+|+.||+|++|+ +|+||| ||...... .. .+...+..+|++++.+|+++.++.. ...|
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~-g~-----~~~~gnn~v~~~dp~tGel~~fl~~P~~aEp 533 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNA-GD-----FAGMGNNQMLCADPATGEIRRFMVGPIGCEV 533 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCS-GG-----GTTCCSCEEEEECTTTCCEEEEEECCTTCEE
T ss_pred ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCcc-cc-----ccccCCceEEEEeCCCCeEEEEEeCCCCccc
Confidence 124689999999999 599999 99753210 00 1122345899999998999888754 3568
Q ss_pred ceeEEccCCCEEEEEecCCC
Q 048181 202 AGVAISVDSSFLLVSEFTGN 221 (310)
Q Consensus 202 nGIa~~~dg~~Lyv~d~~~~ 221 (310)
|||+|+||+++|||+-...+
T Consensus 534 nGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 534 TGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp EEEEECTTSSEEEEEEESTT
T ss_pred cCCEECCCCCEEEEEEeCCC
Confidence 99999999999999876443
No 122
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.96 E-value=1.1e-07 Score=92.77 Aligned_cols=203 Identities=9% Similarity=-0.091 Sum_probs=132.5
Q ss_pred cceEEEccC--CCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 36 GESIAFEPV--GGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 36 Pegia~d~~--G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
|..+.+..| +.+|++...+++|..++.+.+...-. .+....|+++++++....+||++.
T Consensus 156 P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~-------------------i~~g~~p~~v~~SpDGr~lyv~~~ 216 (567)
T 1qks_A 156 PTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTV-------------------LDTGYAVHISRLSASGRYLFVIGR 216 (567)
T ss_dssp CSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEE-------------------EECSSCEEEEEECTTSCEEEEEET
T ss_pred ccccccccCCCceEEEEeCCCCeEEEEECCCCeEEEE-------------------EeCCCCccceEECCCCCEEEEEcC
Confidence 444444433 45555666789999999885432110 023347889999854556899886
Q ss_pred CCcEEEEeCC--CCeEEEeeccCCCccccCccceEEe----CCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 114 YSGLLVVGPN--GRLATQLATGAEGQAFHFLDGLDVD----QGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 114 ~~gi~~id~~--~~~~~~~~~~~~g~~~~~pndvavd----~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
...|..||.. +++.. .....| ..|.+++++ |++..+|+++.. .+.+..+|..
T Consensus 217 dg~V~viD~~~~t~~~v--~~i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~ 274 (567)
T 1qks_A 217 DGKVNMIDLWMKEPTTV--AEIKIG---SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGE 274 (567)
T ss_dssp TSEEEEEETTSSSCCEE--EEEECC---SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETT
T ss_pred CCeEEEEECCCCCCcEe--EEEecC---CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECC
Confidence 6569999985 54332 111112 247899999 664589998743 2678888887
Q ss_pred CCeEEEeec--C----------CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCC
Q 048181 188 SSQVTVLLR--N----------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPG 253 (310)
Q Consensus 188 ~g~~~~~~~--~----------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~ 253 (310)
+.++..... + -....+|..++++..++++....++|+.+++...+ ...+ ......|.++.+++
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~--~~~v~~i~~~~~~~d~~~~p- 351 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN--NLKTTEISAERFLHDGGLDG- 351 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS--EEEEEEEECCSSEEEEEECT-
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc--cceeeeeeccccccCceECC-
Confidence 766543322 1 11345899999988888888899999999986431 2222 22234688999999
Q ss_pred CCCc-EEEEEecCCCCCCCCceeeEEECC-CCcEEEEEec
Q 048181 254 LLQT-FWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 254 ~dG~-l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
+|+ +|+++.... .|..+|. .|+++..+..
T Consensus 352 -dgr~~~va~~~sn--------~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 352 -SHRYFITAANARN--------KLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp -TSCEEEEEEGGGT--------EEEEEETTTTEEEEEEEC
T ss_pred -CCCEEEEEeCCCC--------eEEEEECCCCcEEEEEec
Confidence 996 577776543 5666774 5777777765
No 123
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.94 E-value=8.7e-08 Score=85.34 Aligned_cols=150 Identities=10% Similarity=0.049 Sum_probs=101.5
Q ss_pred EEEecCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 99 LALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 99 la~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
.+++ +++||++....+|+++|++ ++...... ... .....+++++ +|++|++.. +
T Consensus 103 ~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~---~~~~~~~~~~-~g~l~vgt~------------------~ 156 (330)
T 3hxj_A 103 FTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK-TKK---AIYATPIVSE-DGTIYVGSN------------------D 156 (330)
T ss_dssp EEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE-CSS---CCCSCCEECT-TSCEEEECT------------------T
T ss_pred ceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc-CCC---ceeeeeEEcC-CCEEEEEcC------------------C
Confidence 4553 8999998766779999998 44322111 111 2345678888 599999753 2
Q ss_pred ceEEEEcCCCCeEEE-eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecC-CCCCceeeeCCCCC
Q 048181 179 GRLLSYNPRSSQVTV-LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INF-QAKPHNIKRNPGLL 255 (310)
Q Consensus 179 G~l~~~d~~~g~~~~-~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l-~g~Pdgl~~d~~~d 255 (310)
+.|+++|++ ++... ..........++++++|+ ||++. +.|++++.+ +.... ... ......+++|+ +
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~d~~----g~~~~~~~~~~~~~~~~~~~~--~ 225 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAINPD----GTEKWNFYAGYWTVTRPAISE--D 225 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEECTT----SCEEEEECCSSCCCSCCEECT--T
T ss_pred CEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEECCC----CcEEEEEccCCcceeceEECC--C
Confidence 578999987 65432 222233457788988886 88876 788888733 22211 111 13467789999 9
Q ss_pred CcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCC
Q 048181 256 QTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQ 294 (310)
Q Consensus 256 G~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~ 294 (310)
|+||++.... .+.+++++|+.+..+..+.+
T Consensus 226 g~l~v~t~~~---------gl~~~~~~g~~~~~~~~~~~ 255 (330)
T 3hxj_A 226 GTIYVTSLDG---------HLYAINPDGTEKWRFKTGKR 255 (330)
T ss_dssp SCEEEEETTT---------EEEEECTTSCEEEEEECSSC
T ss_pred CeEEEEcCCC---------eEEEECCCCCEeEEeeCCCC
Confidence 9999998754 68899999999888776644
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.92 E-value=1.4e-06 Score=81.34 Aligned_cols=206 Identities=13% Similarity=0.039 Sum_probs=130.0
Q ss_pred CcceEEEccCCCEEEEEeCC---CeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EE
Q 048181 35 GGESIAFEPVGGAFYTGVAD---GRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LY 109 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~---g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-Ly 109 (310)
...+++|.|+|+.++....+ ..|+.++..++. ..+. ........+++. ++|+ |+
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~--------------------~~~~~~~~~~~s-pdg~~la 238 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--------------------SFPRHNGAPAFS-PDGSKLA 238 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE--------------------CCSSCEEEEEEC-TTSSEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee--------------------cCCCcccCEEEc-CCCCEEE
Confidence 45679999999744444333 489889887543 2221 112345678997 5665 55
Q ss_pred EEeCC---CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEc
Q 048181 110 IADAY---SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYN 185 (310)
Q Consensus 110 Vad~~---~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d 185 (310)
++... ..|+.+|.++++...+... . .....++++|+ |+ |+++.... ...+|+.+|
T Consensus 239 ~~~~~~g~~~i~~~d~~~~~~~~l~~~-~----~~~~~~~~spd-g~~l~~~s~~~---------------g~~~i~~~d 297 (415)
T 2hqs_A 239 FALSKTGSLNLYVMDLASGQIRQVTDG-R----SNNTEPTWFPD-SQNLAFTSDQA---------------GRPQVYKVN 297 (415)
T ss_dssp EEECTTSSCEEEEEETTTCCEEECCCC-S----SCEEEEEECTT-SSEEEEEECTT---------------SSCEEEEEE
T ss_pred EEEecCCCceEEEEECCCCCEEeCcCC-C----CcccceEECCC-CCEEEEEECCC---------------CCcEEEEEE
Confidence 44332 2499999988776554321 1 23467899995 65 66553211 124799999
Q ss_pred CCCCeEEEeecCCCCCceeEEccCCCEEEEEecC--CCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcE-EEE
Q 048181 186 PRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFT--GNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTF-WEA 261 (310)
Q Consensus 186 ~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~--~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l-~va 261 (310)
..+++.+.+.........++|+|||++|+++... ...|+.+++++ +.... ... .....+++.+ ||+. +.+
T Consensus 298 ~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~---~~~~~l~~~-~~~~~~~~sp--dg~~l~~~ 371 (415)
T 2hqs_A 298 INGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT---GGVQVLSST-FLDETPSLAP--NGTMVIYS 371 (415)
T ss_dssp TTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT---CCEEECCCS-SSCEEEEECT--TSSEEEEE
T ss_pred CCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC---CCEEEecCC-CCcCCeEEcC--CCCEEEEE
Confidence 8877765554433455689999999988887654 35788888864 22222 111 2467889999 9974 444
Q ss_pred EecCCCCCCCCceeeEEECCCCcEEEEEecCCC
Q 048181 262 AIITRQPAGTPVPIGQRISAFGAVLDTISFEAQ 294 (310)
Q Consensus 262 ~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~ 294 (310)
..... ...+..+|.+|+....+....+
T Consensus 372 s~~~~------~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 372 SSQGM------GSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp EEETT------EEEEEEEETTSCCEEECCCSSS
T ss_pred EcCCC------ccEEEEEECCCCcEEEeeCCCC
Confidence 43321 1368888988888877766554
No 125
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.91 E-value=2.7e-07 Score=84.59 Aligned_cols=98 Identities=8% Similarity=0.103 Sum_probs=67.8
Q ss_pred ceEEeCCCCeEEEEcC-CCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCe
Q 048181 144 GLDVDQGTGVVYFTDA-SGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNR 222 (310)
Q Consensus 144 dvavd~~~G~lyvtd~-~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~ 222 (310)
.++++++++++|++.. ...... ...+.+.|+.+|..++++...+..-. |.+|+|+|||++||++.. +.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~--------~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~ 326 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGT--------HKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GN 326 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTC--------TTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SC
T ss_pred EEEEecCCCeEEEEEccCCCccc--------ccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--Ce
Confidence 3899997689999864 110000 01124589999998887655444334 999999999999999874 89
Q ss_pred EEEEEecCCCCCceee-e---cCCCCCceeeeCCCCCCc
Q 048181 223 TLKYWLRGPRANSFDI-I---NFQAKPHNIKRNPGLLQT 257 (310)
Q Consensus 223 I~~~~~~~~~~g~~~~-~---~l~g~Pdgl~~d~~~dG~ 257 (310)
|..|+... +..++ . .....|.++++++ +|+
T Consensus 327 v~v~D~~t---~~l~~~~~i~~~G~~P~~~~~~p--~G~ 360 (361)
T 2oiz_A 327 VNVYDISQ---PEPKLLRTIEGAAEASLQVQFHP--VGG 360 (361)
T ss_dssp EEEEECSS---SSCEEEEEETTSCSSEEEEEECC--CSC
T ss_pred EEEEECCC---CcceeeEEeccCCCCcEEEEecC--CCC
Confidence 99998753 42233 2 3335799999999 884
No 126
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.91 E-value=5.1e-07 Score=83.40 Aligned_cols=207 Identities=9% Similarity=-0.038 Sum_probs=111.6
Q ss_pred CCcceEEEccCCCEEEEEeC--CCeEEEEECCCceE--E-eeeec--------CCCCccccCCCccccCCC---------
Q 048181 34 FGGESIAFEPVGGAFYTGVA--DGRILKYQAPDGFT--D-FAFTT--------PTRSKAVCDGTTNLDLGP--------- 91 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~--~g~I~r~~~~g~~~--~-~~~~~--------~~~~~~~~~g~~~~~~~~--------- 91 (310)
..|++++++|||+.+|+... ++.|..++ +++.. . +...+ +..+...|..+....+..
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~ 203 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGL 203 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEe
Confidence 46999999999987777653 57899999 75422 2 21100 000011111110000000
Q ss_pred -----CCCcee--eEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCC------CccccCccc---eEEeCCCCeEE
Q 048181 92 -----ICRRTF--GLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAE------GQAFHFLDG---LDVDQGTGVVY 155 (310)
Q Consensus 92 -----~~~~P~--Gla~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~------g~~~~~pnd---vavd~~~G~ly 155 (310)
....|. ...+...++++|+......++.+|..++..+.+. ..+ ......|.+ ++++++++++|
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~-~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKA-PIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEee-eeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 011111 1122222345444433334777777654322211 110 011123555 88898778899
Q ss_pred EEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCC-EEEEEecCCCeEEEEEecCCCCC
Q 048181 156 FTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSS-FLLVSEFTGNRTLKYWLRGPRAN 234 (310)
Q Consensus 156 vtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~-~Lyv~d~~~~~I~~~~~~~~~~g 234 (310)
++........ ...+.+.|+.+|..++++..-+..-..|.+|+++|||+ .||++....+.|..||....+
T Consensus 283 V~~~~~~~~~--------~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~-- 352 (373)
T 2mad_H 283 LLTSEQSAWK--------LHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD-- 352 (373)
T ss_pred EEeccCCccc--------ccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC--
Confidence 9764210000 01134689999999887754444334699999999999 788888788999999986421
Q ss_pred ceee-ecCCCCCceeeeCC
Q 048181 235 SFDI-INFQAKPHNIKRNP 252 (310)
Q Consensus 235 ~~~~-~~l~g~Pdgl~~d~ 252 (310)
.... ......|.+|..-.
T Consensus 353 vv~~i~~vG~~P~~~~~~~ 371 (373)
T 2mad_H 353 QDQSTVELGSGPQVLSVMN 371 (373)
T ss_pred EEeeecCCCCCCcEEEEcc
Confidence 1111 22334688887643
No 127
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.91 E-value=4.3e-07 Score=84.15 Aligned_cols=218 Identities=8% Similarity=-0.047 Sum_probs=125.0
Q ss_pred ceEEEeCCCC-----CCCcceEEEccCCCEEEEEeC--CCeEEEEECCCceE--Eeeeec--------CCCCccccC-CC
Q 048181 23 TFTKILFPPK-----AFGGESIAFEPVGGAFYTGVA--DGRILKYQAPDGFT--DFAFTT--------PTRSKAVCD-GT 84 (310)
Q Consensus 23 ~~~~~~~~~~-----~~~Pegia~d~~G~l~~~d~~--~g~I~r~~~~g~~~--~~~~~~--------~~~~~~~~~-g~ 84 (310)
.+.+++++++ -..|+++++++||+.+|+... .+.|..+|...... ++...+ ...+...|. |.
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~ 200 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGS 200 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSC
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCC
Confidence 3455666631 247999999999987777753 67888898875422 222110 000112232 11
Q ss_pred ---------ccc-----cCCCCCCceee--EEEecCCCeE-EEEeCCCcEEEEeCCCCeEEEeecc--C------CCccc
Q 048181 85 ---------TNL-----DLGPICRRTFG--LALHYATRQL-YIADAYSGLLVVGPNGRLATQLATG--A------EGQAF 139 (310)
Q Consensus 85 ---------~~~-----~~~~~~~~P~G--la~d~~~g~L-yVad~~~gi~~id~~~~~~~~~~~~--~------~g~~~ 139 (310)
... ........|.. .+++..+|++ |+++ ...++.+|..++..+.+... + .+-.-
T Consensus 201 ~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p 279 (386)
T 3sjl_D 201 LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRP 279 (386)
T ss_dssp EEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEE
T ss_pred EEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccC
Confidence 000 00011112322 3554457765 4444 44588888876544332110 0 11000
Q ss_pred cCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCC-EEEEEec
Q 048181 140 HFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSS-FLLVSEF 218 (310)
Q Consensus 140 ~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~-~Lyv~d~ 218 (310)
....-++++++.+++|++......+. ...+..+|+.+|.+++++..-+.--..|++|++++||+ .||+++.
T Consensus 280 ~g~q~~a~~~~~~~lyV~~~~~~~~~--------hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 280 GGWQQVAYHRALDRIYLLVDQRDEWR--------HKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp CSSSCEEEETTTTEEEEEEEECCTTC--------TTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET
T ss_pred CCcceeeECCCCCeEEEEeccccccc--------cCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC
Confidence 11123888887889999853110000 00123579999999988765443334789999999997 8899998
Q ss_pred CCCeEEEEEecCCCCCceee-ecCCCCCceeeeCC
Q 048181 219 TGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNP 252 (310)
Q Consensus 219 ~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~ 252 (310)
..+.|..||... ++..- ...++.|.-|.+..
T Consensus 352 ~~~~VsViD~~t---~k~~~~i~~~~~p~~l~~s~ 383 (386)
T 3sjl_D 352 GDKTLYIHDAES---GEELRSVNQLGHGPQVITTA 383 (386)
T ss_dssp TTTEEEEEETTT---CCEEEEECCCCSSCCEEEEC
T ss_pred CCCeEEEEECCC---CcEEEEecCCCCCceeEECC
Confidence 899999998753 33221 45567788888876
No 128
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.91 E-value=4.2e-08 Score=90.64 Aligned_cols=70 Identities=9% Similarity=-0.011 Sum_probs=49.3
Q ss_pred eEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEec-CCCeEEEEEecCCCCCcee-eecCCCCCceeeeCC
Q 048181 180 RLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEF-TGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNP 252 (310)
Q Consensus 180 ~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~-~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~ 252 (310)
.+..+|..++++..-+..-..|.||++++||+++|++.. ..+.|..+|... ++.. .......|++|++..
T Consensus 295 ~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t---~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 295 NTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS---DQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS---CEEEEECCCCSCCCEEECCC
T ss_pred CEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC---CcEEEEEECCCCCCEEEeec
Confidence 355777776655433332236999999999998999988 699999999853 2221 123346799999986
No 129
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.90 E-value=9.9e-07 Score=81.39 Aligned_cols=199 Identities=11% Similarity=0.092 Sum_probs=129.1
Q ss_pred CCCCcceEEEccCCCEEEEEeCC---------------CeEEEEECCCc--eE--EeeeecCCCCccccCCCccccCCCC
Q 048181 32 KAFGGESIAFEPVGGAFYTGVAD---------------GRILKYQAPDG--FT--DFAFTTPTRSKAVCDGTTNLDLGPI 92 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~~---------------g~I~r~~~~g~--~~--~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (310)
.|....++.+|+.|+||++|... -+|+.++.... .. ++... ......
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p--------------~~~~~~ 150 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFP--------------TRLVEK 150 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECC--------------GGGCCC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECC--------------HHhccc
Confidence 57788899999999999999641 26888887754 22 23221 011223
Q ss_pred CCceeeEEEe-cC------CCeEEEEeCC-CcEEEEeCCCCeEEEeecc-----------CCCccc---cCccceEEeCC
Q 048181 93 CRRTFGLALH-YA------TRQLYIADAY-SGLLVVGPNGRLATQLATG-----------AEGQAF---HFLDGLDVDQG 150 (310)
Q Consensus 93 ~~~P~Gla~d-~~------~g~LyVad~~-~gi~~id~~~~~~~~~~~~-----------~~g~~~---~~pndvavd~~ 150 (310)
....+.|++| .. ++.+||+|.. .+|+++|.++++...+... .+|..+ ...++||++++
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 3456789998 32 5789999975 4699999998876655421 123332 35788999885
Q ss_pred ----CCeEEEEcCCCccCccceeEeeeecCCCceEEEEc------CC-CCeEEEeecCCCCCc--eeEEc-cCCCEEEEE
Q 048181 151 ----TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYN------PR-SSQVTVLLRNLTGPA--GVAIS-VDSSFLLVS 216 (310)
Q Consensus 151 ----~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d------~~-~g~~~~~~~~l~~pn--GIa~~-~dg~~Lyv~ 216 (310)
+..||+.-.+. -++|++. +. ...++.+-+.-.... ++++| .+| .||++
T Consensus 231 ~~~~~~~LYf~plss-----------------~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~ 292 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSA-----------------IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFA 292 (381)
T ss_dssp CTTSCCEEEEEESSC-----------------SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEE
T ss_pred cCCCCeEEEEEECCC-----------------CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEE
Confidence 46888876543 1344442 11 134444444322344 45676 556 59999
Q ss_pred ecCCCeEEEEEecC-CC-CCceee---ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 217 EFTGNRTLKYWLRG-PR-ANSFDI---INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 217 d~~~~~I~~~~~~~-~~-~g~~~~---~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
+...+.|.+++.++ +. ....++ ...-..||+|+++. +|.||+....
T Consensus 293 ~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~--~g~Lwv~sn~ 343 (381)
T 3q6k_A 293 EANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS--KGGLWFMSNG 343 (381)
T ss_dssp ESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT--TSCEEEEECS
T ss_pred eccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC--CCeEEEEECc
Confidence 99999999999875 32 123333 22224799999999 9999998755
No 130
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.90 E-value=4.7e-06 Score=73.55 Aligned_cols=187 Identities=10% Similarity=0.064 Sum_probs=120.3
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVa 111 (310)
....+++|.++++++++...++.|..++...+.. .... ..........+++. ++++ |+++
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-----------------~~~~~~~i~~~~~~-~~~~~l~~~ 159 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE-----------------LTSSAPACYALAIS-PDSKVCFSC 159 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE-----------------EECSSSCEEEEEEC-TTSSEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeee-----------------cccCCCceEEEEEC-CCCCEEEEE
Confidence 4567899999999888888899999998775431 1110 00122345688887 4555 4555
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.....|..+|..+++....... .-.....++++++ |+.+++-. .+|.+..+|..+++.
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-----------------~dg~i~~~d~~~~~~ 217 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQG----HTDGASCIDISND-GTKLWTGG-----------------LDNTVRSWDLREGRQ 217 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTT-SSEEEEEE-----------------TTSEEEEEETTTTEE
T ss_pred eCCCcEEEEeCCCCceeeeeec----ccCceEEEEECCC-CCEEEEEe-----------------cCCcEEEEECCCCce
Confidence 5555588899887654332221 1234678999995 76555432 247888899877766
Q ss_pred EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 192 TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 192 ~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
......-.....++++|+++.|+++ ...+.|+.+++.... ...+.........+++++ +|++.++....
T Consensus 218 ~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d 286 (337)
T 1gxr_A 218 LQQHDFTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAY--CGKWFVSTGKD 286 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSC--EEEECCCSSCEEEEEECT--TSSEEEEEETT
T ss_pred EeeecCCCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCC--eEEEcCCccceeEEEECC--CCCEEEEecCC
Confidence 5544444567899999999866554 567789999886431 122222334567899998 99876665543
No 131
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=1.4e-07 Score=88.72 Aligned_cols=194 Identities=10% Similarity=0.057 Sum_probs=115.1
Q ss_pred CCCcceEEEccCCCEEEEEeCC------CeEEEEECCCc-eE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 33 AFGGESIAFEPVGGAFYTGVAD------GRILKYQAPDG-FT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~~~------g~I~r~~~~g~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
...|..+.+.++| +|++...+ +.|..++.++. .. .+.. + ......+..+-+.++
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~-----------~------~~~~~~~Yd~~~~p~ 198 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI-----------D------RGDQYLAYDFWWNLP 198 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS-----------B------CTTCCCCCCEEEETT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc-----------C------CCCccccceEEECCC
Confidence 3479999999999 77776655 78999998743 21 2110 0 001123345666644
Q ss_pred CCeEEEEeC-------------------CCcEEEEeCCCCeEEEeeccCCCccccCccceEE--eCCCCeEEEEcCCCcc
Q 048181 105 TRQLYIADA-------------------YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDV--DQGTGVVYFTDASGVY 163 (310)
Q Consensus 105 ~g~LyVad~-------------------~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvav--d~~~G~lyvtd~~~~~ 163 (310)
.+.+|+++. .+.|..+|.++++........ ..-..|..+++ +|+...+|++..-.
T Consensus 199 ~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg--~~g~~P~~i~f~~~Pdg~~aYV~~e~~-- 274 (462)
T 2ece_A 199 NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG--EENRMALELRPLHDPTKLMGFINMVVS-- 274 (462)
T ss_dssp TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC--TTEEEEEEEEECSSTTCCEEEEEEEEE--
T ss_pred CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC--CCCCccceeEeeECCCCCEEEEEEeee--
Confidence 455666652 345999998876543222221 11234667766 88655788876400
Q ss_pred CccceeEeeeecCCCceEEEEcCCCCeEEE--e--------ecC-----------CCCCceeEEccCCCEEEEEecCCCe
Q 048181 164 DFRTIVKLNITNDSTGRLLSYNPRSSQVTV--L--------LRN-----------LTGPAGVAISVDSSFLLVSEFTGNR 222 (310)
Q Consensus 164 ~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~--~--------~~~-----------l~~pnGIa~~~dg~~Lyv~d~~~~~ 222 (310)
...-++.|+++..+.++.+. + ... -..|.+|.+|+||++|||++...+.
T Consensus 275 ----------~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~ 344 (462)
T 2ece_A 275 ----------LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE 344 (462)
T ss_dssp ----------TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE
T ss_pred ----------ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE
Confidence 00011233322111122111 0 001 2468999999999999999999999
Q ss_pred EEEEEecCCCCCceee-----ec-------------CCCCCceeeeCCCCCC-cEEEEE
Q 048181 223 TLKYWLRGPRANSFDI-----IN-------------FQAKPHNIKRNPGLLQ-TFWEAA 262 (310)
Q Consensus 223 I~~~~~~~~~~g~~~~-----~~-------------l~g~Pdgl~~d~~~dG-~l~va~ 262 (310)
|.+|+++.+ ++.++ .+ +.+.|.++++++ || .|||+.
T Consensus 345 VavfdV~d~--~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp--DGk~LyVaN 399 (462)
T 2ece_A 345 VRQYDISNP--FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR--DGRRVYVTN 399 (462)
T ss_dssp EEEEECSST--TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT--TSSEEEEEC
T ss_pred EEEEEecCC--CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC--CCCEEEEEc
Confidence 999998643 22222 11 123699999999 99 589987
No 132
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.87 E-value=1.3e-07 Score=89.87 Aligned_cols=221 Identities=17% Similarity=0.130 Sum_probs=122.0
Q ss_pred CCCCcceEEEccCCC--EEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC---
Q 048181 32 KAFGGESIAFEPVGG--AFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA--- 104 (310)
Q Consensus 32 ~~~~Pegia~d~~G~--l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~--- 104 (310)
.|..|.+|++.++|. +|+++ ..|+|+++++++.. ..+..... ....|. .......+.||++++.
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~e-r~G~i~~~~~~g~~~~~~~~~~~~----~~~~g~----~~~~e~Gllgia~~P~f~~ 82 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILE-KEGYVKILTPEGEIFKEPYLDIHK----LVQSGI----KGGDERGLLSLAFHPNYKK 82 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEE-TTTEEEEECTTSCBCSSCSEECTT----TBCCCC----SSSCCCSEEEEEECTTHHH
T ss_pred CCCCceEEEECCCCCeEEEEEe-CCceEEEEeCCCCeeeeeecCCcc----eeccCc----cccCCCcceeeEeCCCCcC
Confidence 577899999999985 66655 58999999876542 12211000 000000 0011345789999742
Q ss_pred CCeEEEEeCC-------------CcEEEEeCCCC--------eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCcc
Q 048181 105 TRQLYIADAY-------------SGLLVVGPNGR--------LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVY 163 (310)
Q Consensus 105 ~g~LyVad~~-------------~gi~~id~~~~--------~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~ 163 (310)
++.|||+... ..|.++....+ ..+++........-.+...|+++| +|.|||+--....
T Consensus 83 n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~ 161 (463)
T 2wg3_C 83 NGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMI 161 (463)
T ss_dssp HCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTC
T ss_pred CCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCC
Confidence 5899997431 24666654321 123333321111223467899999 5999998644311
Q ss_pred C--ccceeEeeeecCCCceEEEEcCCCC--------------------eEEEeecCCCCCceeEEccC-----CC-EEEE
Q 048181 164 D--FRTIVKLNITNDSTGRLLSYNPRSS--------------------QVTVLLRNLTGPAGVAISVD-----SS-FLLV 215 (310)
Q Consensus 164 ~--~~~~~~~~~~~~~~G~l~~~d~~~g--------------------~~~~~~~~l~~pnGIa~~~d-----g~-~Lyv 215 (310)
. ....... .....|+|+|+++++. ..++...++..|.|++|+|+ |+ ++|+
T Consensus 162 ~~~~~~~~q~--~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~ 239 (463)
T 2wg3_C 162 TLDDMEEMDG--LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILC 239 (463)
T ss_dssp CHHHHHHCTT--CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEE
T ss_pred CCCccccccC--cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEe
Confidence 0 0000000 1234699999999852 24567789999999999997 33 5788
Q ss_pred EecCC-----CeEEEEEecCCCCCcee-eecCC----CCCceeeeCC-----CCCCcEEEEEecC
Q 048181 216 SEFTG-----NRTLKYWLRGPRANSFD-IINFQ----AKPHNIKRNP-----GLLQTFWEAAIIT 265 (310)
Q Consensus 216 ~d~~~-----~~I~~~~~~~~~~g~~~-~~~l~----g~Pdgl~~d~-----~~dG~l~va~~~~ 265 (310)
+|... .+|..+.. |..-|-.. +...+ ..|-|+++-. +..|.++++++..
T Consensus 240 ~D~~G~~~~~~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g 303 (463)
T 2wg3_C 240 SDSNGKNRSSARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNG 303 (463)
T ss_dssp ECC------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTS
T ss_pred cccCCCCCCCCeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCC
Confidence 88622 24444421 21112111 11111 3577888732 1256788888864
No 133
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.85 E-value=8.5e-06 Score=78.09 Aligned_cols=214 Identities=13% Similarity=0.101 Sum_probs=132.7
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
.+.-....++++.++|..+.+...++.|..++..+...... .........+++. ++|+.+
T Consensus 341 ~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~-------------------~~~~~~v~~~~~s-~dg~~l 400 (577)
T 2ymu_A 341 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL-------------------TGHSSSVRGVAFS-PDGQTI 400 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEE-------------------ECCSSCEEEEEEC-TTSSCE
T ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEe-------------------cCCCCCeEEEEEC-CCCCEE
Confidence 33334567899999999888888889998888776542211 0122346689997 566655
Q ss_pred EE-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IA-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Va-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++ .....|..++..+.....+.. +-....+++++|+ ++.+++-. .++.+..+|...
T Consensus 401 ~~~~~d~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~s~d-~~~l~~~~-----------------~d~~v~~w~~~~ 457 (577)
T 2ymu_A 401 ASASDDKTVKLWNRNGQLLQTLTG-----HSSSVWGVAFSPD-DQTIASAS-----------------DDKTVKLWNRNG 457 (577)
T ss_dssp EEEETTSEEEEECTTCCEEEEEEC-----CSSCEEEEEECTT-SSEEEEEE-----------------TTSEEEEEETTS
T ss_pred EEEeCCCEEEEEeCCCCEEEEecC-----CCCCeEEEEECCC-CCEEEEEc-----------------CCCEEEEEECCC
Confidence 54 334447777766544443321 1123568999995 76666532 246677777654
Q ss_pred CeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCC
Q 048181 189 SQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQ 267 (310)
Q Consensus 189 g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~ 267 (310)
..+..+...-...+.++|+|||++ +++-...+.|..++.++. .... ..-......+++.+ +|++.++....
T Consensus 458 ~~~~~~~~~~~~v~~~~~spd~~~-las~~~d~~i~iw~~~~~---~~~~~~~h~~~v~~l~~s~--dg~~l~s~~~d-- 529 (577)
T 2ymu_A 458 QLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSP--DGQTIASASDD-- 529 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSCE-EEEEETTSEEEEEETTSC---EEEEEECCSSCEEEEEECT--TSSCEEEEETT--
T ss_pred CEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCEEEEEcCCCC---EEEEEeCCCCCEEEEEEcC--CCCEEEEEECc--
Confidence 444444443445689999999985 455566778888876532 1111 22223457789999 99876665443
Q ss_pred CCCCCceeeEEECCCCcEEEEEecCCCccccceeEEE
Q 048181 268 PAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQ 304 (310)
Q Consensus 268 ~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~ 304 (310)
+.+..+|.+|+.+..+....+ .|+.+.
T Consensus 530 ------g~v~lwd~~~~~~~~~~~h~~----~v~~~~ 556 (577)
T 2ymu_A 530 ------KTVKLWNRNGQLLQTLTGHSS----SVWGVA 556 (577)
T ss_dssp ------SEEEEECTTSCEEEEEECCSS----CEEEEE
T ss_pred ------CEEEEEeCCCCEEEEEcCCCC----CEEEEE
Confidence 267778888888877765433 455443
No 134
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.85 E-value=2.1e-06 Score=78.20 Aligned_cols=205 Identities=8% Similarity=0.063 Sum_probs=122.0
Q ss_pred ccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC---CC----eEEEEeCC
Q 048181 42 EPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA---TR----QLYIADAY 114 (310)
Q Consensus 42 d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~---~g----~LyVad~~ 114 (310)
|+...+++.....+.++.++.+|+...+. ..++++++.+-+. +| .+|+++..
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~---------------------~~g~~nnVD~r~~~~l~g~~~dla~as~R~ 95 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSY---------------------NTGKLNNVDIRYDFPLNGKKVDIAAASNRS 95 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEE---------------------CCSCEEEEEEEEEEEETTEEEEEEEEEECS
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEc---------------------cCCCcccEEEecccccCCceEeEEEEeCCC
Confidence 34557777777788899999987764432 1246666655210 11 34677765
Q ss_pred --C-c--EEEEeCCCCeEEEeecc--CCCccccCccceEE--eCCCCe--EEEEcCCCccCccceeEeeeecCCCceEEE
Q 048181 115 --S-G--LLVVGPNGRLATQLATG--AEGQAFHFLDGLDV--DQGTGV--VYFTDASGVYDFRTIVKLNITNDSTGRLLS 183 (310)
Q Consensus 115 --~-g--i~~id~~~~~~~~~~~~--~~g~~~~~pndvav--d~~~G~--lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~ 183 (310)
. . ++.+|++++.++.+... .-+..+..|.|+++ ++.+|. +|+++.. |++..
T Consensus 96 ~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~------------------G~~~q 157 (355)
T 3amr_A 96 EGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE------------------GEFEQ 157 (355)
T ss_dssp TTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS------------------SEEEE
T ss_pred CCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC------------------CeEEE
Confidence 4 3 56668887776655321 10123567899999 775564 6777654 33333
Q ss_pred EcC---CCCeEE--E--eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---e---cCCCCCceeee
Q 048181 184 YNP---RSSQVT--V--LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---I---NFQAKPHNIKR 250 (310)
Q Consensus 184 ~d~---~~g~~~--~--~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~---~l~g~Pdgl~~ 250 (310)
|+. .+++++ . -..--..|.|++++++..+||+++-..+ ||+|+.+.....+.++ . .+..-|.||++
T Consensus 158 ~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai 236 (355)
T 3amr_A 158 YELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI 236 (355)
T ss_dssp EEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE
T ss_pred EEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEE
Confidence 211 122111 1 1222357899999998889999998755 9999965322112122 1 23345899999
Q ss_pred CCCCC--CcEEEEEecCCCCCCCCceeeEEECC--CCcEEEEEecCCC
Q 048181 251 NPGLL--QTFWEAAIITRQPAGTPVPIGQRISA--FGAVLDTISFEAQ 294 (310)
Q Consensus 251 d~~~d--G~l~va~~~~~~~~~~~~~~v~~~~~--~G~~~~~~~~p~~ 294 (310)
...++ |.|++++.+.. ....|+. ..+.+..+.+-.+
T Consensus 237 ~~~~~g~gyLivSsQG~~--------s~~Vydr~~~~~~vg~f~Ig~~ 276 (355)
T 3amr_A 237 YYAADGKGYLMASSQGNS--------SYAIYDRQGKNKYVADFRITDG 276 (355)
T ss_dssp EECGGGCEEEEEEEGGGT--------EEEEEESSTTCCEEEEEEECCC
T ss_pred EecCCCCEEEEEEcCCCC--------EEEEEECCCCCcEEEEEEecCC
Confidence 42114 45788887763 4555664 4678888876544
No 135
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.77 E-value=2.2e-05 Score=75.13 Aligned_cols=202 Identities=14% Similarity=0.128 Sum_probs=123.3
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
....++++.+++..+++...++.|..++.++...... .........+++. ++|+.+++-.
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~-------------------~~~~~~v~~~~~s-~~g~~l~~~~ 363 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTL-------------------TGHSSSVWGVAFS-PDGQTIASAS 363 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE-------------------CCCSSCEEEEEEC-TTSSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEE-------------------eCCCCCEEEEEEC-CCCCEEEEEe
Confidence 4567899999999888888888888888775432211 0122345688996 6676655433
Q ss_pred CCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 114 YSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 114 ~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
..+ +..++..+.....+.. +-...+.++++++ |+.+++-. .++.|..+|.....+.
T Consensus 364 ~dg~v~~~~~~~~~~~~~~~-----~~~~v~~~~~s~d-g~~l~~~~-----------------~d~~v~~~~~~~~~~~ 420 (577)
T 2ymu_A 364 DDKTVKLWNRNGQLLQTLTG-----HSSSVRGVAFSPD-GQTIASAS-----------------DDKTVKLWNRNGQLLQ 420 (577)
T ss_dssp TTSEEEEEETTCCEEEEEEC-----CSSCEEEEEECTT-SSCEEEEE-----------------TTSEEEEECTTCCEEE
T ss_pred CCCEEEEEcCCCCEEEEecC-----CCCCeEEEEECCC-CCEEEEEe-----------------CCCEEEEEeCCCCEEE
Confidence 334 6667766544433321 1134578999994 77666532 2366777776433334
Q ss_pred EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCC
Q 048181 193 VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGT 271 (310)
Q Consensus 193 ~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~ 271 (310)
.+...-....+++|+||+++| ++-...+.|..++.++. .... .........+++++ +|.+.++....+
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l-~~~~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~sp--d~~~las~~~d~----- 489 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTI-ASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSP--DGQTIASASDDK----- 489 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTSC---EEEEEECCSSCEEEEEECT--TSCEEEEEETTS-----
T ss_pred EecCCCCCeEEEEECCCCCEE-EEEcCCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcC--CCCEEEEEeCCC-----
Confidence 443333445789999999854 55566788888876542 1211 22233456788998 998777655432
Q ss_pred CceeeEEECCCCcEEEEEecC
Q 048181 272 PVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 272 ~~~~v~~~~~~G~~~~~~~~p 292 (310)
.+..+|.+|+.+..+...
T Consensus 490 ---~i~iw~~~~~~~~~~~~h 507 (577)
T 2ymu_A 490 ---TVKLWNRNGQLLQTLTGH 507 (577)
T ss_dssp ---EEEEEETTSCEEEEEECC
T ss_pred ---EEEEEcCCCCEEEEEeCC
Confidence 455566666666555443
No 136
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.77 E-value=4.1e-06 Score=78.69 Aligned_cols=201 Identities=8% Similarity=-0.018 Sum_probs=120.9
Q ss_pred cCCCEEEE-EeCCCeEEEEECCC---ceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC----
Q 048181 43 PVGGAFYT-GVADGRILKYQAPD---GFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY---- 114 (310)
Q Consensus 43 ~~G~l~~~-d~~~g~I~r~~~~g---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~---- 114 (310)
.+++.+|+ ...+++|+.++... +.+......+ ++ ........+|+++.+. ++| |||+..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~------~~----~~~~~g~s~Ph~~~~~-pdG-i~Vs~~g~~~g 160 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEP------EE----VKKVSGYSRLHTVHCG-PDA-IYISALGNEEG 160 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECH------HH----HHHHHCEEEEEEEEEC-SSC-EEEEEEEETTS
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeech------hh----cccccCCCcccceeEC-CCe-EEEEcCCCcCC
Confidence 55654444 56789999998642 2222221100 00 0000123479999996 677 9997543
Q ss_pred ---CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCC------ccCccceeEeeeecCCCceEEEEc
Q 048181 115 ---SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASG------VYDFRTIVKLNITNDSTGRLLSYN 185 (310)
Q Consensus 115 ---~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~------~~~~~~~~~~~~~~~~~G~l~~~d 185 (310)
.+++.+|.++.++..-... ++.+..++-|+.+.|+...+|+++... .+...+ + +.....+|..||
T Consensus 161 ~~~g~v~vlD~~T~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~----~-~~~~~d~V~v~D 234 (462)
T 2ece_A 161 EGPGGILMLDHYSFEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEH----L-KDRYGNRIHFWD 234 (462)
T ss_dssp CSCCEEEEECTTTCCEEEECCS-BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTT----H-HHHSCCEEEEEE
T ss_pred CCCCeEEEEECCCCeEEEEEcc-CCCCccccceEEECCCCCEEEEccCcCccccccccchhh----h-hhccCCEEEEEE
Confidence 2599999998765432221 222344566888899634455555431 011110 0 002346899999
Q ss_pred CCCCeEEEeecC---CCCCceeEE--ccCCCEEEEEec-----CCCeEEEEEecCCCCCcee------e------ecC--
Q 048181 186 PRSSQVTVLLRN---LTGPAGVAI--SVDSSFLLVSEF-----TGNRTLKYWLRGPRANSFD------I------INF-- 241 (310)
Q Consensus 186 ~~~g~~~~~~~~---l~~pnGIa~--~~dg~~Lyv~d~-----~~~~I~~~~~~~~~~g~~~------~------~~l-- 241 (310)
.+++++...++- -..|.+|.| +|+|+++||+.. .++.|++|..++ |..+ + ..+
T Consensus 235 ~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~---g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 235 LRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED---GKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp TTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---TEEEEEEEEEECCEECCSSCCG
T ss_pred CCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---CceeEEEEEeCCCccccccccc
Confidence 887765443322 136788877 999999999988 888998877763 3211 1 111
Q ss_pred --------CCCCceeeeCCCCCC-cEEEEEecCC
Q 048181 242 --------QAKPHNIKRNPGLLQ-TFWEAAIITR 266 (310)
Q Consensus 242 --------~g~Pdgl~~d~~~dG-~l~va~~~~~ 266 (310)
++.|.+|.++. || .|||+.++..
T Consensus 312 ~~~~f~~~~~~pa~I~lS~--DGrfLYVSnrg~d 343 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISL--DDKFLYLSLWGIG 343 (462)
T ss_dssp GGGGGTEECCCCCCEEECT--TSCEEEEEETTTT
T ss_pred cccccccCCCceeEEEECC--CCCEEEEEeCCCC
Confidence 25689999999 99 5899999874
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.75 E-value=3.3e-06 Score=72.76 Aligned_cols=180 Identities=11% Similarity=0.014 Sum_probs=109.7
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCC-ceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEe
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPD-GFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIAD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad 112 (310)
...+++|.++|+.+++.. ++.|+.++.++ +...... . .........+++. ++|+ |+++.
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~----------~-------~~~~~~~~~~~~s-pdg~~l~~~~ 103 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD----------T-------GFATICNNDHGIS-PDGALYAISD 103 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC----------C-------TTCCCBCSCCEEC-TTSSEEEEEE
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec----------c-------ccccccccceEEC-CCCCEEEEEE
Confidence 577899999999666654 78999998876 4321110 0 0112345578887 5555 44444
Q ss_pred C----CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 113 A----YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 113 ~----~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
. ...|+.++.++++...+... ...+.++++|++..|+++.... ..-+||.++..+
T Consensus 104 ~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~spdg~~l~~~~~~~---------------~~~~l~~~~~~~ 162 (297)
T 2ojh_A 104 KVEFGKSAIYLLPSTGGTPRLMTKN------LPSYWHGWSPDGKSFTYCGIRD---------------QVFDIYSMDIDS 162 (297)
T ss_dssp CTTTSSCEEEEEETTCCCCEECCSS------SSEEEEEECTTSSEEEEEEEET---------------TEEEEEEEETTT
T ss_pred eCCCCcceEEEEECCCCceEEeecC------CCccceEECCCCCEEEEEECCC---------------CceEEEEEECCC
Confidence 2 23589999887665544221 1256789999533455554221 112688888777
Q ss_pred CeEEEeecCCCCCceeEEccCCCEEEEEec--CCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEE
Q 048181 189 SQVTVLLRNLTGPAGVAISVDSSFLLVSEF--TGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFW 259 (310)
Q Consensus 189 g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~--~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~ 259 (310)
++...+.......+.++|+|||+.|+++.. ...+||.++.++. .... .........+++++ +|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~--dg~~l 231 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSP--SGDKV 231 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECT--TSSEE
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECC--CCCEE
Confidence 776666555556789999999998887754 4456777765432 2222 11122345688888 99743
No 138
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.72 E-value=5.1e-05 Score=67.86 Aligned_cols=192 Identities=13% Similarity=0.064 Sum_probs=120.3
Q ss_pred eCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 28 LFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 28 ~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
.+.+.-..-.++++.+++.++++...++.|..++...+....... ........+++. ++++
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~------------------~~~~~~~~~~~s-pdg~ 135 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID------------------AGPVDAWTLAFS-PDSQ 135 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------------------CCTTCCCCEEEC-TTSS
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe------------------CCCccEEEEEEC-CCCC
Confidence 345555567788999999988888899999999977543221110 111234468887 6676
Q ss_pred EEEEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 108 LYIADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 108 LyVad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
.+++.... .+..++.++++....... . -.....++++|+ |+.+++-. .+|.|..+|.
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~-~---~~~v~~~~~spd-g~~lasg~-----------------~dg~i~iwd~ 193 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDT-R---GKFILSIAYSPD-GKYLASGA-----------------IDGIINIFDI 193 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEEC-S---SSCEEEEEECTT-SSEEEEEE-----------------TTSCEEEEET
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecC-C---CceEEEEEECCC-CCEEEEEc-----------------CCCeEEEEEC
Confidence 66654443 477788776554322211 1 124568999994 87766543 2477888888
Q ss_pred CCCeEEEeecCC-CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 187 RSSQVTVLLRNL-TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 187 ~~g~~~~~~~~l-~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.+++......+- ...+.++|+||++ ++++-...+.|..+++... ..... .+-......+++.+ +|.+.++...
T Consensus 194 ~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~sp--~~~~l~s~s~ 268 (321)
T 3ow8_A 194 ATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA--NLAGTLSGHASWVLNVAFCP--DDTHFVSSSS 268 (321)
T ss_dssp TTTEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC--CEEEEECCCSSCEEEEEECT--TSSEEEEEET
T ss_pred CCCcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc--ceeEEEcCCCCceEEEEECC--CCCEEEEEeC
Confidence 777654444332 3458999999998 5566677888988887532 11111 22223456788888 8877666544
Q ss_pred C
Q 048181 265 T 265 (310)
Q Consensus 265 ~ 265 (310)
.
T Consensus 269 D 269 (321)
T 3ow8_A 269 D 269 (321)
T ss_dssp T
T ss_pred C
Confidence 3
No 139
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.71 E-value=1.8e-05 Score=69.70 Aligned_cols=183 Identities=8% Similarity=-0.058 Sum_probs=118.3
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEe
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIAD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad 112 (310)
....+++|.++++++++...++.|..++...+...... .........++++ ++++ |+++.
T Consensus 142 ~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~------------------~~~~~~i~~~~~~-~~~~~l~~~~ 202 (337)
T 1gxr_A 142 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF------------------QGHTDGASCIDIS-NDGTKLWTGG 202 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEEC-TTSSEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee------------------ecccCceEEEEEC-CCCCEEEEEe
Confidence 34678999999998888888999999997754322110 1122356788997 4554 44454
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
....|..+|..+++...... . -.....++++++ |+.+++-. .+|.+..+|..+++..
T Consensus 203 ~dg~i~~~d~~~~~~~~~~~-~----~~~v~~~~~s~~-~~~l~~~~-----------------~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQHD-F----TSQIFSLGYCPT-GEWLAVGM-----------------ESSNVEVLHVNKPDKY 259 (337)
T ss_dssp TTSEEEEEETTTTEEEEEEE-C----SSCEEEEEECTT-SSEEEEEE-----------------TTSCEEEEETTSSCEE
T ss_pred cCCcEEEEECCCCceEeeec-C----CCceEEEEECCC-CCEEEEEc-----------------CCCcEEEEECCCCCeE
Confidence 44458888988765433221 1 123568899995 66555432 2367888887766665
Q ss_pred EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 193 VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 193 ~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.+...-.....++++|+++.| ++-...+.|..+++.. +.... ......+..+++++ +|++.++...
T Consensus 260 ~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~~---~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~ 326 (337)
T 1gxr_A 260 QLHLHESCVLSLKFAYCGKWF-VSTGKDNLLNAWRTPY---GASIFQSKESSSVLSCDISV--DDKYIVTGSG 326 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTT---CCEEEEEECSSCEEEEEECT--TSCEEEEEET
T ss_pred EEcCCccceeEEEECCCCCEE-EEecCCCcEEEEECCC---CeEEEEecCCCcEEEEEECC--CCCEEEEecC
Confidence 554444567899999999854 5556688899998764 22222 22334567788998 8876655443
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.68 E-value=1.7e-05 Score=78.25 Aligned_cols=146 Identities=9% Similarity=0.056 Sum_probs=85.8
Q ss_pred ceeeEEEecCCCe-EEEEeCCC-----cEEEEeCCCC-eEEEeeccCCCccccCccceEEeC--CCCeEEEEcCCCccCc
Q 048181 95 RTFGLALHYATRQ-LYIADAYS-----GLLVVGPNGR-LATQLATGAEGQAFHFLDGLDVDQ--GTGVVYFTDASGVYDF 165 (310)
Q Consensus 95 ~P~Gla~d~~~g~-LyVad~~~-----gi~~id~~~~-~~~~~~~~~~g~~~~~pndvavd~--~~G~lyvtd~~~~~~~ 165 (310)
.+..+++. ++|+ |+++.... .|+.+|.+++ ..+.+............+.++++| + |+++++....
T Consensus 259 ~~~~~~~s-pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d-g~~l~~~~~~---- 332 (706)
T 2z3z_A 259 FLTNLSWS-PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN-NQFIWQSRRD---- 332 (706)
T ss_dssp EEEEEEEC-TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS-SEEEEEECTT----
T ss_pred eEeeEEEE-CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC-CEEEEEEccC----
Confidence 45678897 5665 66643322 4888999887 555443221111112246789998 7 6655543221
Q ss_pred cceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCce-eEEccCCCEEEEEecCCC----eEEEEEecCCCCCceeeec
Q 048181 166 RTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAG-VAISVDSSFLLVSEFTGN----RTLKYWLRGPRANSFDIIN 240 (310)
Q Consensus 166 ~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnG-Ia~~~dg~~Lyv~d~~~~----~I~~~~~~~~~~g~~~~~~ 240 (310)
..-+||.++.+++.++.+..+-..... ++|+|||+.||++....+ +|+++++++. ..+...
T Consensus 333 -----------g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~---~~~~l~ 398 (706)
T 2z3z_A 333 -----------GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG---KTKDLT 398 (706)
T ss_dssp -----------SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC---CCEESC
T ss_pred -----------CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC---Cceecc
Confidence 234688888655555555433222234 799999999998877654 8888887642 222211
Q ss_pred CCCCCceeeeCCCCCCcEEEEE
Q 048181 241 FQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 241 l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
.......+++++ ||+.++..
T Consensus 399 ~~~~~~~~~~sp--dg~~l~~~ 418 (706)
T 2z3z_A 399 PESGMHRTQLSP--DGSAIIDI 418 (706)
T ss_dssp CSSSEEEEEECT--TSSEEEEE
T ss_pred CCCceEEEEECC--CCCEEEEE
Confidence 112345678888 88755443
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.67 E-value=6.5e-07 Score=86.74 Aligned_cols=183 Identities=11% Similarity=-0.062 Sum_probs=109.2
Q ss_pred CcceEEEccCCCEEEEEeC-----CCeEEEEEC--CCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec-CCC
Q 048181 35 GGESIAFEPVGGAFYTGVA-----DGRILKYQA--PDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY-ATR 106 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~-----~g~I~r~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~-~~g 106 (310)
...+++|.|| +++|+... ..+|+.++. +++...+. ........++.+ .++
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~---------------------~~~~~~~~~~s~dg~~ 123 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLE---------------------AVKPMRILSGVDTGEA 123 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECT---------------------TSCSBEEEEEEECSSC
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcccccc---------------------CCCCceeeeeCCCCCe
Confidence 4567888888 66665543 236777877 55433211 111122334432 233
Q ss_pred eEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 107 QLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 107 ~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
.+|++....++..+|.++++.+.+.... . ++++++|+ |+.+++-+.. ....+.|+.+|.
T Consensus 124 ~~~~s~~~~~~~l~d~~~g~~~~l~~~~------~-~~~~~spD-G~~la~~~~~-------------~~~~~~i~~~d~ 182 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGGGLRELARLP------G-FGFVSDIR-GDLIAGLGFF-------------GGGRVSLFTSNL 182 (582)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEES------S-CEEEEEEE-TTEEEEEEEE-------------ETTEEEEEEEET
T ss_pred EEEEecCCCCceEEEccCCcEEEeecCC------C-ceEEECCC-CCEEEEEEEc-------------CCCCeEEEEEcC
Confidence 4565555555667788888766654321 1 68999995 7665532211 111256999998
Q ss_pred CCCeEEEeecCCCCCceeEEccCCCEEEEEecCC-CeEEEEEecCCCCCceee-ecCCCCCceee--------eCCCCCC
Q 048181 187 RSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTG-NRTLKYWLRGPRANSFDI-INFQAKPHNIK--------RNPGLLQ 256 (310)
Q Consensus 187 ~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~-~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~--------~d~~~dG 256 (310)
.+++.+.+.......+.++|||||+.|+.++... .+|+++++++. ...+ ......+.+++ +++ ||
T Consensus 183 ~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg 257 (582)
T 3o4h_A 183 SSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG---SVEDLELPSKDFSSYRPTAITWLGYLP--DG 257 (582)
T ss_dssp TTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC---CEEECCCSCSHHHHHCCSEEEEEEECT--TS
T ss_pred CCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC---cEEEccCCCcChhhhhhccccceeEcC--CC
Confidence 8888877765545568999999999888555433 38999988653 2223 22222234455 888 99
Q ss_pred cEEEEEecC
Q 048181 257 TFWEAAIIT 265 (310)
Q Consensus 257 ~l~va~~~~ 265 (310)
.+|++....
T Consensus 258 ~~~~~~~~~ 266 (582)
T 3o4h_A 258 RLAVVARRE 266 (582)
T ss_dssp CEEEEEEET
T ss_pred cEEEEEEcC
Confidence 877766543
No 142
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.67 E-value=3.2e-06 Score=82.00 Aligned_cols=221 Identities=10% Similarity=-0.018 Sum_probs=128.4
Q ss_pred EEeCCCCCCCcceEEEc--cCCCEEEEEe------------------CCCeEEEEECCCceEEeeeecCCCCccccCCCc
Q 048181 26 KILFPPKAFGGESIAFE--PVGGAFYTGV------------------ADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTT 85 (310)
Q Consensus 26 ~~~~~~~~~~Pegia~d--~~G~l~~~d~------------------~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~ 85 (310)
.+++|. -.+|+|+++. |++..+|+.. .++.+..++.+.....+.
T Consensus 127 ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q--------------- 190 (595)
T 1fwx_A 127 ILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ--------------- 190 (595)
T ss_dssp EEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE---------------
T ss_pred EEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEE---------------
Confidence 456773 2589999984 7887677762 234566777775332211
Q ss_pred cccCCCCCCceeeEEEecCCCeEEEEeCCC--------------------------------------cEEEEeCCC--C
Q 048181 86 NLDLGPICRRTFGLALHYATRQLYIADAYS--------------------------------------GLLVVGPNG--R 125 (310)
Q Consensus 86 ~~~~~~~~~~P~Gla~d~~~g~LyVad~~~--------------------------------------gi~~id~~~--~ 125 (310)
....++|.++++++..+.+|+++... +|.+||..+ +
T Consensus 191 ----I~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~ 266 (595)
T 1fwx_A 191 ----VLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS 266 (595)
T ss_dssp ----EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC
T ss_pred ----EEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC
Confidence 12234788999986566788876432 244444443 1
Q ss_pred eE--EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe------------E
Q 048181 126 LA--TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ------------V 191 (310)
Q Consensus 126 ~~--~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~------------~ 191 (310)
+. ..+. --..|.++.++|++..+|+++... .++..||..+.+ +
T Consensus 267 ~~~~~~Ip------vg~~PhGv~~sPDGk~v~V~~~~s-----------------~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 267 SLFTRYIP------IANNPHGCNMAPDKKHLCVAGKLS-----------------PTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp CSSEEEEE------EESSCCCEEECTTSSEEEEECTTS-----------------SBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred ceeEEEEe------cCCCceEEEEcCCCCEEEEeCCCC-----------------CeEEEEECcccccccccccCcccce
Confidence 11 1110 114789999999644688888643 456666654321 2
Q ss_pred EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCC---CCc--eee-ecCC--C------CCceeeeCCCCCCc
Q 048181 192 TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPR---ANS--FDI-INFQ--A------KPHNIKRNPGLLQT 257 (310)
Q Consensus 192 ~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~---~g~--~~~-~~l~--g------~Pdgl~~d~~~dG~ 257 (310)
..-..--..|.+++|++|| .+|++....++|.+++++... .|. .++ ..++ - .+-|+++++ ||.
T Consensus 324 ~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~--DGk 400 (595)
T 1fwx_A 324 VAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA--TND 400 (595)
T ss_dssp EECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC--CSS
T ss_pred EEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC--CCC
Confidence 2222233589999999999 899999999999999986410 000 111 1121 1 236788888 996
Q ss_pred -EEEEEecCCCCC----C--CCceeeEEECCCCcEEEEEecCC
Q 048181 258 -FWEAAIITRQPA----G--TPVPIGQRISAFGAVLDTISFEA 293 (310)
Q Consensus 258 -l~va~~~~~~~~----~--~~~~~v~~~~~~G~~~~~~~~p~ 293 (310)
||++.....+-. | +...+++.+ +.|+.......|.
T Consensus 401 ~l~~~Nk~skdr~~~~gp~~~~~~ql~di-s~~~m~lv~d~p~ 442 (595)
T 1fwx_A 401 WLVCLSKFSKDRFLNVGPLKPENDQLIDI-SGDKMVLVHDGPT 442 (595)
T ss_dssp EEEEEESCCTTSSCCCCSSCCEEEEEEEC-SSSSCEEEEEEEE
T ss_pred EEEEcCCCCccccccCCCCCCCcceEEEc-CCCcEEEEEEEcC
Confidence 555555442221 1 222345555 4455444444454
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.66 E-value=6.4e-06 Score=70.93 Aligned_cols=182 Identities=12% Similarity=0.093 Sum_probs=109.5
Q ss_pred CcceEEEccCCCEEEEEe----CCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EE
Q 048181 35 GGESIAFEPVGGAFYTGV----ADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LY 109 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~----~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-Ly 109 (310)
.+.+++|.++|..+++.. ...+|+.++.+++..... ........+++. ++|+ |+
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~--------------------~~~~~~~~~~~s-pdg~~l~ 144 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM--------------------TKNLPSYWHGWS-PDGKSFT 144 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC--------------------CSSSSEEEEEEC-TTSSEEE
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe--------------------ecCCCccceEEC-CCCCEEE
Confidence 456799999998666655 257888888765432110 111235677886 4554 55
Q ss_pred EEe-CCC--cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEc
Q 048181 110 IAD-AYS--GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYN 185 (310)
Q Consensus 110 Vad-~~~--gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d 185 (310)
++. ... .|+.++.++++...+... ...++.++++++ |+ ++++.... ...+||.++
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~s~d-g~~l~~~~~~~---------------~~~~i~~~~ 203 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDIDSGVETRLTHG-----EGRNDGPDYSPD-GRWIYFNSSRT---------------GQMQIWRVR 203 (297)
T ss_dssp EEEEETTEEEEEEEETTTCCEEECCCS-----SSCEEEEEECTT-SSEEEEEECTT---------------SSCEEEEEE
T ss_pred EEECCCCceEEEEEECCCCcceEcccC-----CCccccceECCC-CCEEEEEecCC---------------CCccEEEEC
Confidence 443 222 488888877665544321 124578999995 65 66553211 235788888
Q ss_pred CCCCeEEEeecCCCCCceeEEccCCCEEEEEecC----------CCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCC
Q 048181 186 PRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFT----------GNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGL 254 (310)
Q Consensus 186 ~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~----------~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~ 254 (310)
..++....+.........++|+|||++|+++... ..+|+.+++.+........ ....+....+++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-- 281 (297)
T 2ojh_A 204 VDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSP-- 281 (297)
T ss_dssp TTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCT--
T ss_pred CCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECC--
Confidence 7666665554433445679999999988776553 2568888886532111111 12234467788888
Q ss_pred CCcEEE
Q 048181 255 LQTFWE 260 (310)
Q Consensus 255 dG~l~v 260 (310)
+|...+
T Consensus 282 dg~~l~ 287 (297)
T 2ojh_A 282 DGDEFA 287 (297)
T ss_dssp TSSEEE
T ss_pred CCCEEE
Confidence 887433
No 144
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.63 E-value=0.0001 Score=64.91 Aligned_cols=211 Identities=13% Similarity=0.072 Sum_probs=125.4
Q ss_pred EeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 27 ILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 27 ~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
..+.+.-....+++|.++|+++++...++.|..++...+ ..... .........+++. ++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-------------------~~h~~~v~~~~~~-~~ 76 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------------------SGHKLGISDVAWS-SD 76 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEEC-TT
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-------------------ccCCCceEEEEEc-CC
Confidence 344555556789999999998888888999998887643 22111 1122345678997 56
Q ss_pred CeEEEE-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 106 RQLYIA-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 106 g~LyVa-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++++++ .....|..+|.++++....... .-.....++++++ ++++++-. .+|.+..+
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~s~~-----------------~d~~i~iw 134 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQ-SNLIVSGS-----------------FDESVRIW 134 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSS-SSEEEEEE-----------------TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcC----CCCCEEEEEEcCC-CCEEEEEe-----------------CCCcEEEE
Confidence 665554 4444477788877654322211 1123567889984 77666543 24678888
Q ss_pred cCCCCeEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEE
Q 048181 185 NPRSSQVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 185 d~~~g~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
|..+++...... .-.....++++++++. +++-...+.|..+++.... -...+ .........+++++ +|++.++.
T Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~l~~~ 210 (312)
T 4ery_A 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSP--NGKYILAA 210 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCC-EEEEECCSSCCCEEEEEECT--TSSEEEEE
T ss_pred ECCCCEEEEEecCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCc-eeeEEeccCCCceEEEEECC--CCCEEEEE
Confidence 877665433332 2234578999999985 4555667888888875321 00111 11112235588888 88766665
Q ss_pred ecCCCCCCCCceeeEEECC-CCcEEEEEec
Q 048181 263 IITRQPAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 263 ~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
...+ .+..+|- .++.+..+..
T Consensus 211 ~~d~--------~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 211 TLDN--------TLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp ETTT--------EEEEEETTTTEEEEEECS
T ss_pred cCCC--------eEEEEECCCCcEEEEEEe
Confidence 4432 4555553 3555554443
No 145
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.61 E-value=2.5e-06 Score=76.54 Aligned_cols=196 Identities=11% Similarity=0.031 Sum_probs=125.2
Q ss_pred ecceEEEeCCCCC----CCcceEEEccCC-CEEEEE---eCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCC
Q 048181 21 IPTFTKILFPPKA----FGGESIAFEPVG-GAFYTG---VADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGP 91 (310)
Q Consensus 21 ~~~~~~~~~~~~~----~~Pegia~d~~G-~l~~~d---~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 91 (310)
...+.++.+.+.- ..-.+.++.++| .+||++ ..+..|++++.+|+. +.+. .
T Consensus 87 ~~~Iy~i~~dg~~~~~l~~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt-----------~--------- 146 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIK-----------N--------- 146 (302)
T ss_dssp SEEEEEEETTSCCCEEEECSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEE-----------S---------
T ss_pred CCeEEEEeCCCCcceEeecCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEe-----------C---------
Confidence 4556666665431 111234555554 688888 578899999998753 3221 0
Q ss_pred CCCceeeEEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeE
Q 048181 92 ICRRTFGLALHYATRQLYIADAY-SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 92 ~~~~P~Gla~d~~~g~LyVad~~-~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~ 170 (310)
....| +.+ ..+.||.++.+ ..|++++.+++..+.+.. + +. ...++|+++.||+++...
T Consensus 147 ~~~~~--~~~--~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~-~~----~~~~~P~g~~iy~t~~~~--------- 205 (302)
T 3s25_A 147 HYLFT--CNT--SDRYFYYNNPKNGQLYRYDTASQSEALFYD---C-NC----YKPVVLDDTNVYYMDVNR--------- 205 (302)
T ss_dssp SCCCC--SEE--ETTEEEEECTTTCCEEEEETTTTEEEEEEC---S-CE----EEEEEEETTEEEEEEGGG---------
T ss_pred CCceE--eeE--ECCEEEEEeCCCceEEEEECCCCCEEEEeC---C-Cc----cceeeecCCEEEEEEcCC---------
Confidence 00111 233 47889998763 459999999877666532 2 11 134566679999998642
Q ss_pred eeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEE-ecCCCeEEEEEecCCCCCceee-ecCCCCCcee
Q 048181 171 LNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVS-EFTGNRTLKYWLRGPRANSFDI-INFQAKPHNI 248 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~-d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl 248 (310)
..+|++.+.+++..+++.+.. -..++|+|+.||.+ +.....|++++++|. ....+ .+ . ...|
T Consensus 206 -------~~~I~~~~ldG~~~~~Lt~~~----~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~--~r~~l~~~-~--~~~i 269 (302)
T 3s25_A 206 -------DNAIVHVNINNPNPVVLTEAN----IEHYNVYGSLIFYQRGGDNPALCVVKNDGT--GFKELAKG-E--FCNI 269 (302)
T ss_dssp -------TTEEEEECSSSCCCEECSCSC----EEEEEEETTEEEEEECSSSCEEEEEETTSC--CCEEEEES-C--EEEE
T ss_pred -------CcEEEEEECCCCCeEEEeCCC----cceEEECCCEEEEEECCCCcEEEEEECCCC--ccEEeeCC-c--cceE
Confidence 147999998876666655432 14588999999997 556789999999974 22333 22 1 2267
Q ss_pred eeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCc
Q 048181 249 KRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGA 284 (310)
Q Consensus 249 ~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~ 284 (310)
++.. +.||-+.+..+ .+.++..||.
T Consensus 270 ~i~~---d~Iy~td~~~~--------~i~~~~~dGs 294 (302)
T 3s25_A 270 NVTS---QYVYFTDFVSN--------KEYCTSTQNP 294 (302)
T ss_dssp EECS---SEEEEEETTTC--------CEEEEESSSC
T ss_pred EEeC---CEEEEEECCCC--------eEEEEECCCC
Confidence 7764 68999988753 5777777775
No 146
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.58 E-value=3.5e-06 Score=84.59 Aligned_cols=221 Identities=14% Similarity=0.115 Sum_probs=126.2
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCc----eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDG----FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
..++..|++|++| ++.. +.+.++++..+ ...+.. +.. ...-.......|..| ++|+|||+
T Consensus 326 v~~i~~D~~g~lW-iGt~-~Gl~~~~~~~~~~~~~~~~~~-----------~~~--~~~l~~~~v~~i~~d-~~g~lWig 389 (758)
T 3ott_A 326 FYSLFRDSKGFYW-FGGA-NGLIRFTDPAGERHDAIWYRM-----------GDK--TYPLSHNRIRHIYED-KEQQLWIA 389 (758)
T ss_dssp EEEEEECTTCCEE-EEET-TEEEEESCTTSSCCCCEEECT-----------TCS--SSCCSCSCEEEEEEC-TTSCEEEE
T ss_pred EEEEEEcCCCCEE-EeeC-CcceeecccccccceeEEecc-----------CCc--CCCCCCCceEEEEEC-CCCCEEEE
Confidence 4577888889954 5554 56889876632 111110 000 000012235678887 78999998
Q ss_pred eCCCcEEEEeCCCCeEEEeecc-CCC-ccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC-
Q 048181 112 DAYSGLLVVGPNGRLATQLATG-AEG-QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS- 188 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~-~~g-~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~- 188 (310)
.. .||.++++++++.+.+... ..+ .+.+....+..|. +|+||++... +.|+++|+++
T Consensus 390 t~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigT~~------------------~Gl~~~~~~~~ 449 (758)
T 3ott_A 390 TD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDT-AGQLWISTCL------------------GGIFVVDKHKL 449 (758)
T ss_dssp ET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECT-TSEEEEEESS------------------SCEEEEEHHHH
T ss_pred eC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcC-CCCEEEEECC------------------CceEEEccccc
Confidence 74 5899999998876654321 111 1223456788888 5999997643 2377776532
Q ss_pred -----CeEE---Ee--ecCCC--CCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---ecCC--CCCceeeeC
Q 048181 189 -----SQVT---VL--LRNLT--GPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---INFQ--AKPHNIKRN 251 (310)
Q Consensus 189 -----g~~~---~~--~~~l~--~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~~l~--g~Pdgl~~d 251 (310)
+... .. ..++. ....|..+++|+ ||+.....+-|.+|+... +..+. ..+. ..+..+..|
T Consensus 450 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~---~~~~~~~~~~~~~~~~~~~i~~d 525 (758)
T 3ott_A 450 MQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRT---REVTKLFADELTGEKSPNYLLCD 525 (758)
T ss_dssp HHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTT---TEEEEECTTTSCGGGCEEEEEEC
T ss_pred cccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCC---CceEEecCCCcCCCcccceEEEC
Confidence 1111 10 11222 246788899887 888333345688998643 23322 1221 246789999
Q ss_pred CCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCCCccccceeEEEecCCC
Q 048181 252 PGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEAQYSTTPISEVQPFGGA 309 (310)
Q Consensus 252 ~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~~~~~~~~t~~~~~~~~ 309 (310)
. +|+||++... .+.+++|+......+.. .+.....|..+++.+|.
T Consensus 526 ~--~g~lWigt~~----------Gl~~~~~~~~~~~~~~~-~gl~~~~i~~i~~~~g~ 570 (758)
T 3ott_A 526 E--DGLLWVGFHG----------GVMRINPKDESQQSISF-GSFSNNEILSMTCVKNS 570 (758)
T ss_dssp T--TSCEEEEETT----------EEEEECC--CCCCBCCC-CC---CCEEEEEEETTE
T ss_pred C--CCCEEEEecC----------ceEEEecCCCceEEecc-cCCCccceEEEEECCCC
Confidence 9 9999999753 48899987654444421 22222356666665543
No 147
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.57 E-value=0.00011 Score=65.70 Aligned_cols=209 Identities=6% Similarity=-0.107 Sum_probs=119.1
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-Ee
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-AD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad 112 (310)
...+++|.++|+++++...++.|..++.+++. ..... +.........+++. +++++++ +.
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~-~~~~~l~~~~ 71 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE-----------------LKEHNGQVTGVDWA-PDSNRIVTCG 71 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEE-----------------EECCSSCEEEEEEE-TTTTEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeee-----------------ecCCCCcccEEEEe-CCCCEEEEEc
Confidence 46789999999988888889999988876542 11110 00122345689997 5665554 44
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe--
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ-- 190 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~-- 190 (310)
....|..+|.++++......... .-...+.++++++ |+.+++-.. +|.+..+|..+++
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~-~~~l~~~~~-----------------d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPN-EKKFAVGSG-----------------SRVISICYFEQENDW 131 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTT-SSEEEEEET-----------------TSSEEEEEEETTTTE
T ss_pred CCCeEEEEECCCCeeeeeEEeec--CCCceeEEEECCC-CCEEEEEeC-----------------CCEEEEEEecCCCcc
Confidence 44447777777665332221111 1234678999995 665554322 2445444443332
Q ss_pred --EEEeecC-CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCC---------------CCcee-e-ecCCCCCceeee
Q 048181 191 --VTVLLRN-LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPR---------------ANSFD-I-INFQAKPHNIKR 250 (310)
Q Consensus 191 --~~~~~~~-l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~---------------~g~~~-~-~~l~g~Pdgl~~ 250 (310)
....... -.....++|+|+++.| ++-...+.|+.+++.... .+... . ....+....+++
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 210 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLL-AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF 210 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEE-EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEE-EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE
Confidence 1222222 3456899999999854 555567888888864210 11111 1 122234677899
Q ss_pred CCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 251 NPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 251 d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
++ +|++.++....+ .+..+|. .++.+..+...
T Consensus 211 ~~--~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 211 SA--NGSRVAWVSHDS--------TVCLADADKKMAVATLASE 243 (372)
T ss_dssp CS--SSSEEEEEETTT--------EEEEEEGGGTTEEEEEECS
T ss_pred CC--CCCEEEEEeCCC--------EEEEEECCCCceeEEEccC
Confidence 98 887655544332 4555664 45666555544
No 148
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.57 E-value=6e-05 Score=67.07 Aligned_cols=200 Identities=8% Similarity=0.097 Sum_probs=116.0
Q ss_pred eEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec
Q 048181 24 FTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY 103 (310)
Q Consensus 24 ~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~ 103 (310)
++.+.+.+.-....+++|.++|.++++...++.|..++...+...... .........+++.
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~------------------~~h~~~v~~~~~~- 83 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL------------------DGHTGTIWSIDVD- 83 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE------------------CCCSSCEEEEEEC-
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh------------------hhcCCcEEEEEEc-
Confidence 344555655566788999999998888888999999987643221110 1122345688997
Q ss_pred CCCeEEE-EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 104 ATRQLYI-ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 104 ~~g~LyV-ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
+++++++ +.....|..+|..+++...... . -.....++++++ |..+++-.... ...+|.+.
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~----~~~v~~~~~~~~-~~~l~~~~~~~------------~~~~g~i~ 145 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWK-S----PVPVKRVEFSPC-GNYFLAILDNV------------MKNPGSIN 145 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE-C----SSCEEEEEECTT-SSEEEEEECCB------------TTBCCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEee-c----CCCeEEEEEccC-CCEEEEecCCc------------cCCCCEEE
Confidence 5665555 4444448888887765433322 1 124578999995 66655432210 01124444
Q ss_pred EEcCCCC------------eEEEeec--CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCce
Q 048181 183 SYNPRSS------------QVTVLLR--NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHN 247 (310)
Q Consensus 183 ~~d~~~g------------~~~~~~~--~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdg 247 (310)
.+|..++ ....+.. .......++++|+++.|++ -...+.|..|++.... ..... ....+....
T Consensus 146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA-GHKDGKISKYDVSNNY-EYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE-EETTSEEEEEETTTTT-EEEEEEECCSSCEEE
T ss_pred EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE-EcCCCEEEEEECCCCc-EeEEEEecCCCceeE
Confidence 4443211 1111111 1226689999999986554 4567889999886421 11111 222344677
Q ss_pred eeeCCCCCCcEEEEEec
Q 048181 248 IKRNPGLLQTFWEAAII 264 (310)
Q Consensus 248 l~~d~~~dG~l~va~~~ 264 (310)
+++++ +|.+.++...
T Consensus 224 ~~~~~--~~~~l~~~~~ 238 (369)
T 3zwl_B 224 MQFSP--DLTYFITSSR 238 (369)
T ss_dssp EEECT--TSSEEEEEET
T ss_pred EEECC--CCCEEEEecC
Confidence 88988 8876655543
No 149
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.55 E-value=0.00016 Score=65.54 Aligned_cols=205 Identities=9% Similarity=-0.031 Sum_probs=119.7
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEeC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad~ 113 (310)
...+++|.++|.++++...++.|..++..+...... .........+++. ++++ |+++..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------------------~~~~~~v~~~~~~-~~~~~l~~~~~ 169 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVL-------------------NFHRAPIVSVKWN-KDGTHIISMDV 169 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE-------------------CCCCSCEEEEEEC-TTSSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeec-------------------cCCCccEEEEEEC-CCCCEEEEEec
Confidence 567899999999889988899999998665432211 1122345688997 4555 555555
Q ss_pred CCcEEEEeCCCCeEEEeeccCCCc-----------cccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 114 YSGLLVVGPNGRLATQLATGAEGQ-----------AFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~g~-----------~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
...|..+|..+++........... .-.....+++.+ ++.+++... +|.|+
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------------~g~i~ 230 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPGP------------------KGAIF 230 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE-TTEEEEECG------------------GGCEE
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCEEEEEcC------------------CCeEE
Confidence 555888888776543322211110 001156788887 476655432 46788
Q ss_pred EEcCCCCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcEEEE
Q 048181 183 SYNPRSSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEA 261 (310)
Q Consensus 183 ~~d~~~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l~va 261 (310)
.+|..+++..... ..-.....++++|+++.|+ +-...+.|..+++.... -...+.........+++.+ +| ++++
T Consensus 231 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~--~~-~l~~ 305 (425)
T 1r5m_A 231 VYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL-SASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVG--DD-KVIS 305 (425)
T ss_dssp EEETTCSSCSEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEET--TT-EEEE
T ss_pred EEEcCCCceeeeeccCCCceEEEEECCCCCEEE-EEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECC--CC-EEEE
Confidence 8887765443222 2233457899999998554 55567888888875321 1111122233457788888 88 4333
Q ss_pred EecCCCCCCCCceeeEEECC-CCcEEEEEec
Q 048181 262 AIITRQPAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 262 ~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
.... +.+..+|. .++.+..+..
T Consensus 306 ~~~d--------~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 306 CSMD--------GSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp EETT--------SEEEEEETTTTEEEEEEEC
T ss_pred EeCC--------CcEEEEECCCCcEeEeccc
Confidence 3332 24555553 3555554443
No 150
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.52 E-value=6e-06 Score=75.16 Aligned_cols=162 Identities=12% Similarity=0.088 Sum_probs=93.0
Q ss_pred cceEEEccCCCEEEEEeC------CCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 36 GESIAFEPVGGAFYTGVA------DGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~------~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
..+++|.|||.++.+... ++.|+.++...+.... ..|. ........-..+++. ++++++
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~---------~~~~-----~~~~~~~~V~~~~~s-~d~~~l 109 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE---------SLCT-----AGVQTEAGVTDVAWV-SEKGIL 109 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG---------GGCS-----EEEECSSCEEEEEEE-TTTEEE
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce---------eEec-----ccCCCCCCEEEEEEc-CCCCEE
Confidence 468999999998887754 4566666543221100 0000 000111234578897 678888
Q ss_pred EEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 110 IADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 110 Vad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
++.....|...|..+++............-...+.++++|+ |+.+++-. .+|.|..+|..++
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~sgs-----------------~dg~v~iwd~~~~ 171 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD-GTQAVSGG-----------------KDFSVKVWDLSQK 171 (357)
T ss_dssp EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS-SSEEEEEE-----------------TTSCEEEEETTTT
T ss_pred EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC-CCEEEEEe-----------------CCCeEEEEECCCC
Confidence 77655457666766544221111000011234678999994 87776643 2467888888777
Q ss_pred eEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 190 QVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 190 ~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+...... .-...+.++|+++++.++++-...+.|..+++..
T Consensus 172 ~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 172 AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 6544333 2345688999999877788888888898887753
No 151
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.50 E-value=2e-05 Score=79.02 Aligned_cols=205 Identities=17% Similarity=0.193 Sum_probs=120.4
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
..++..|++|++ |++. .+.|.++++.++ .+.+...... + .........|..| ++|+|||+...
T Consensus 375 v~~i~~d~~g~l-Wigt-~~GL~~~~~~~~~~~~~~~~~~~-------~------~~~~~~v~~i~~d-~~g~lWigT~~ 438 (758)
T 3ott_A 375 IRHIYEDKEQQL-WIAT-DGSINRYDYATRQFIHYNIVDNT-------G------TYNTNWTYYIFED-TAGQLWISTCL 438 (758)
T ss_dssp EEEEEECTTSCE-EEEE-TTEEEEEETTTTEEEEEEEECCC---------------CBSSSEEEEEEC-TTSEEEEEESS
T ss_pred eEEEEECCCCCE-EEEe-CCcHhhcCcCCCcEEEeecCCCc-------C------CCCCceEEEEEEc-CCCCEEEEECC
Confidence 467888889995 4555 468999998754 3333211000 0 0011234567777 78999998777
Q ss_pred CcEEEEeCCC------CeEE---EeeccCCCccccCccceEEeCCCCeEEE--EcCCCccCccceeEeeeecCCCceEEE
Q 048181 115 SGLLVVGPNG------RLAT---QLATGAEGQAFHFLDGLDVDQGTGVVYF--TDASGVYDFRTIVKLNITNDSTGRLLS 183 (310)
Q Consensus 115 ~gi~~id~~~------~~~~---~~~~~~~g~~~~~pndvavd~~~G~lyv--td~~~~~~~~~~~~~~~~~~~~G~l~~ 183 (310)
.||.++++++ +... .+ ....+.+-.....+..|+ +|+||+ +.. +.|++
T Consensus 439 ~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~-------------------~Gl~~ 497 (758)
T 3ott_A 439 GGIFVVDKHKLMQSTSGQYIAEQNY-SVHNGLSGMFINQIIPDN-EGNVWVLLYNN-------------------KGIDK 497 (758)
T ss_dssp SCEEEEEHHHHHHCCSSEEECSEEE-CGGGTCSCSCEEEEEECT-TSCEEEEETTC-------------------SSEEE
T ss_pred CceEEEccccccccCCcceeccccc-ccccccccceeeeEEEcC-CCCEEEEccCC-------------------CCcEE
Confidence 7899998653 1111 11 111122223466788998 599998 321 23999
Q ss_pred EcCCCCeEEEeec-CC---CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCC-CCCceeeeCCCCCCcE
Q 048181 184 YNPRSSQVTVLLR-NL---TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQ-AKPHNIKRNPGLLQTF 258 (310)
Q Consensus 184 ~d~~~g~~~~~~~-~l---~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~-g~Pdgl~~d~~~dG~l 258 (310)
+|+++++.+.... .+ ..++.|..+.+|+ ||++-. +-|.+|+............+++ ....+|.. . +|+|
T Consensus 498 ~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~-~--~g~l 571 (758)
T 3ott_A 498 INPRTREVTKLFADELTGEKSPNYLLCDEDGL-LWVGFH--GGVMRINPKDESQQSISFGSFSNNEILSMTC-V--KNSI 571 (758)
T ss_dssp EETTTTEEEEECTTTSCGGGCEEEEEECTTSC-EEEEET--TEEEEECC--CCCCBCCCCC---CCEEEEEE-E--TTEE
T ss_pred EeCCCCceEEecCCCcCCCcccceEEECCCCC-EEEEec--CceEEEecCCCceEEecccCCCccceEEEEE-C--CCCE
Confidence 9998887776532 12 2467899999886 888753 4688998653211111002333 22345554 4 6999
Q ss_pred EEEEecCCCCCCCCceeeEEECCCCcEEEEEecCC
Q 048181 259 WEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEA 293 (310)
Q Consensus 259 ~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~ 293 (310)
|++... .+.++||+-.....+.+|.
T Consensus 572 Wi~t~~----------Gl~~~~~~~~~~~~~~~~~ 596 (758)
T 3ott_A 572 WVSTTN----------GLWIIDRKTMDARQQNMTN 596 (758)
T ss_dssp EEEESS----------CEEEEETTTCCEEEC--CC
T ss_pred EEECCC----------CeEEEcCCCceeEEecCCC
Confidence 999854 3788887655555555554
No 152
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.50 E-value=4.7e-06 Score=74.71 Aligned_cols=138 Identities=9% Similarity=0.148 Sum_probs=91.4
Q ss_pred cCCCEEEEEe-CCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC------
Q 048181 43 PVGGAFYTGV-ADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY------ 114 (310)
Q Consensus 43 ~~G~l~~~d~-~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~------ 114 (310)
.++.+||... .+++|+|++.+|.. +.+. ...+.-|.+ .++.||.++..
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~----------------------~~~~~~i~~--~g~~Iyy~~~~~~~~~~ 79 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLS----------------------NDTAMYINA--DKNYVYYVRNNNQKITS 79 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEE----------------------EEEEEEEEE--CSSEEEEEEECC-----
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEcc----------------------CCceeeEEE--cCCEEEEEECCCCcccc
Confidence 3556777754 37899999998753 2221 012445655 47888887542
Q ss_pred --------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 115 --------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 115 --------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
..|++++.++++.+.+... .+ +.++++ ++.||++|... ..+..|++++.
T Consensus 80 ~~~~~~n~~~Iy~i~~dg~~~~~l~~~-~~------~~~s~~--g~~Iy~~~~~~--------------~~~~~Iy~~~~ 136 (302)
T 3s25_A 80 QTFFSYDRNSLCRIKRNGHGSTVLDPD-PC------IYASLI--GNYIYYLHYDT--------------QTATSLYRIRI 136 (302)
T ss_dssp -CCSSCCSEEEEEEETTSCCCEEEECS-CE------EEEEEE--TTEEEEEEESS--------------SSCEEEEEEET
T ss_pred cceeccCCCeEEEEeCCCCcceEeecC-Cc------cEEEEe--CCEEEEEeecC--------------CCCceEEEEEC
Confidence 2499999998776655432 11 244554 68999998210 12357999998
Q ss_pred CCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCC
Q 048181 187 RSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGP 231 (310)
Q Consensus 187 ~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~ 231 (310)
++...+.+..... ++++++|+.||+++....+|++++++|.
T Consensus 137 dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 137 DGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp TSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred CCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 7655565554422 5678899999999988889999998863
No 153
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.49 E-value=5.7e-06 Score=82.13 Aligned_cols=153 Identities=15% Similarity=0.070 Sum_probs=86.9
Q ss_pred CcceEEEccCCCEEEEEeC-CC-----eEEEEECCCce-EEeeeecCCCCccccCCCcc----ccC---CCCC--Cceee
Q 048181 35 GGESIAFEPVGGAFYTGVA-DG-----RILKYQAPDGF-TDFAFTTPTRSKAVCDGTTN----LDL---GPIC--RRTFG 98 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~-~g-----~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~----~~~---~~~~--~~P~G 98 (310)
.+.+++|.+||+.+++... ++ .|+.++.+++. ..+.. .... ..+|... ... .... .....
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD-SKVV---LPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC-GGGT---C--------------------CCEESCC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc-hhhc---ccccccccchhhhhhhhhhhccccCcce
Confidence 5778999999985555444 66 89999987543 22211 0000 0000000 000 0000 11356
Q ss_pred EEEecCCCe-EEEEeCCCcEEEEeCCCC---eEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeee
Q 048181 99 LALHYATRQ-LYIADAYSGLLVVGPNGR---LATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNI 173 (310)
Q Consensus 99 la~d~~~g~-LyVad~~~gi~~id~~~~---~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~ 173 (310)
++++ ++|+ |+++.. ..|+.+|.+++ +...+... -.....++++|+ |+ |.++.
T Consensus 114 ~~~S-pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SPD-G~~la~~~--------------- 170 (741)
T 2ecf_A 114 YQWS-PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSPK-GGFVSFIR--------------- 170 (741)
T ss_dssp CEEC-TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECTT-SSEEEEEE---------------
T ss_pred eEEC-CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccC-----CcccccccCCCC-CCEEEEEe---------------
Confidence 7887 5665 555544 56999998877 54433211 123578999995 65 44442
Q ss_pred ecCCCceEEEEcCCCCeEEEeecCCC-----------------CCceeEEccCCCEEEEEec
Q 048181 174 TNDSTGRLLSYNPRSSQVTVLLRNLT-----------------GPAGVAISVDSSFLLVSEF 218 (310)
Q Consensus 174 ~~~~~G~l~~~d~~~g~~~~~~~~l~-----------------~pnGIa~~~dg~~Lyv~d~ 218 (310)
++.|+.+|..+++...+...-. .+.+++|||||++|+++..
T Consensus 171 ----~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 171 ----GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp ----TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred ----CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 1368888877776655433211 2578999999998888754
No 154
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.49 E-value=0.00019 Score=64.12 Aligned_cols=183 Identities=12% Similarity=0.113 Sum_probs=116.2
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-eC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-DA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d~ 113 (310)
....++|.|+|..+++...++.|..++...+....... ........+++. ++|+++++ ..
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~------------------~~~~~v~~~~~s-pdg~~lasg~~ 184 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD------------------TRGKFILSIAYS-PDGKYLASGAI 184 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE------------------CSSSCEEEEEEC-TTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec------------------CCCceEEEEEEC-CCCCEEEEEcC
Confidence 45579999999988888889999988876443222110 112345678997 56766554 33
Q ss_pred CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 114 YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
...|..+|..+++...... + .-...+.++++|+ |+++++-.. +|.|..+|..+++...
T Consensus 185 dg~i~iwd~~~~~~~~~~~---~-h~~~v~~l~~spd-~~~l~s~s~-----------------dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLE---G-HAMPIRSLTFSPD-SQLLVTASD-----------------DGYIKIYDVQHANLAG 242 (321)
T ss_dssp TSCEEEEETTTTEEEEEEC---C-CSSCCCEEEECTT-SCEEEEECT-----------------TSCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEc---c-cCCceeEEEEcCC-CCEEEEEcC-----------------CCeEEEEECCCcceeE
Confidence 4448888988776432221 1 1224578999994 877776432 4678888876665443
Q ss_pred ee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce-ee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 194 LL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF-DI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 194 ~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~-~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.. ..-.....++|+|++++ +++-...+.|..+++.. +.. .. .+-.+....+++.+ +|...++...
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~-l~s~s~D~~v~iwd~~~---~~~~~~~~~h~~~v~~v~~s~--~g~~l~s~~~ 310 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGT---RTCVHTFFDHQDQVWGVKYNG--NGSKIVSVGD 310 (321)
T ss_dssp EECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECT--TSSEEEEEET
T ss_pred EEcCCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCC---CEEEEEEcCCCCcEEEEEECC--CCCEEEEEeC
Confidence 33 23334678999999985 55666778888888753 221 11 22233456788888 8876665544
No 155
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.47 E-value=0.0003 Score=64.44 Aligned_cols=206 Identities=11% Similarity=0.053 Sum_probs=122.1
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-EeCC
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-ADAY 114 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad~~ 114 (310)
..+++|.++|.++++...++.|..++...+...... .........+++. ++++.++ +...
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~------------------~~h~~~v~~~~~~-p~~~~l~s~s~d 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL------------------QGHEQDIYSLDYF-PSGDKLVSGSGD 186 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEEC-TTSSEEEEEETT
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE------------------ccCCCCEEEEEEc-CCCCEEEEecCC
Confidence 458999999998888888999999998754322111 1122345678887 5565544 4444
Q ss_pred CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe
Q 048181 115 SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL 194 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~ 194 (310)
..|..+|..+++....... . .....+++++.+|+++++-.. +|.+..+|..+++....
T Consensus 187 ~~v~iwd~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~~ 244 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSI-E----DGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVER 244 (393)
T ss_dssp SEEEEEETTTTEEEEEEEC-S----SCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEEE
T ss_pred CcEEEEECCCCeeEEEEEc-C----CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEe
Confidence 4477788887764332221 1 234578888744776665432 36677777766554322
Q ss_pred e--------cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCC---------Cceee--ecCCCCCceeeeCCCCC
Q 048181 195 L--------RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRA---------NSFDI--INFQAKPHNIKRNPGLL 255 (310)
Q Consensus 195 ~--------~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~---------g~~~~--~~l~g~Pdgl~~d~~~d 255 (310)
. ..-.....++|+|||++| ++-+..+.|..+++..... +.... .+-......+++.+ +
T Consensus 245 ~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~ 321 (393)
T 1erj_A 245 LDSENESGTGHKDSVYSVVFTRDGQSV-VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ--N 321 (393)
T ss_dssp EC------CCCSSCEEEEEECTTSSEE-EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG--G
T ss_pred ecccccCCCCCCCCEEEEEECCCCCEE-EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC--C
Confidence 2 112235789999999854 5666788888888753211 11111 11122345678888 8
Q ss_pred CcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecCC
Q 048181 256 QTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFEA 293 (310)
Q Consensus 256 G~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~ 293 (310)
|.+.++.... ..+..+|. .|+.+..+....
T Consensus 322 ~~~l~sgs~D--------~~v~iwd~~~~~~~~~l~~h~ 352 (393)
T 1erj_A 322 DEYILSGSKD--------RGVLFWDKKSGNPLLMLQGHR 352 (393)
T ss_dssp GCEEEEEETT--------SEEEEEETTTCCEEEEEECCS
T ss_pred CCEEEEEeCC--------CeEEEEECCCCeEEEEECCCC
Confidence 8766555443 25777774 577777666543
No 156
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.46 E-value=0.00015 Score=64.47 Aligned_cols=186 Identities=10% Similarity=0.030 Sum_probs=108.7
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-e
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-D 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d 112 (310)
....+++|.++++++++...++.|..++...+...... ........+++. ++++.+++ .
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------------------~~~~~v~~~~~~-~~~~~l~~~~ 134 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW-------------------KSPVPVKRVEFS-PCGNYFLAIL 134 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-------------------ECSSCEEEEEEC-TTSSEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-------------------ecCCCeEEEEEc-cCCCEEEEec
Confidence 45678999999998888888999999997744322110 122346678887 55555444 3
Q ss_pred CC-----CcEEEEeCCCCe----EEEeecc-----CCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 113 AY-----SGLLVVGPNGRL----ATQLATG-----AEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 113 ~~-----~gi~~id~~~~~----~~~~~~~-----~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
.. ..|..++...+. ....... ...........++++++ |+.+++-. .+
T Consensus 135 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-----------------~d 196 (369)
T 3zwl_B 135 DNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK-GKYIIAGH-----------------KD 196 (369)
T ss_dssp CCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG-GCEEEEEE-----------------TT
T ss_pred CCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC-CCEEEEEc-----------------CC
Confidence 33 335555543321 1110000 00001124667888884 66555432 24
Q ss_pred ceEEEEcCCC-CeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCC
Q 048181 179 GRLLSYNPRS-SQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLL 255 (310)
Q Consensus 179 G~l~~~d~~~-g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~d 255 (310)
|.|..+|..+ ++..... ..-.....++|+|+++.|+ +-+..+.|..+++.. +.... .........+++++ +
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~--~ 270 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFI-TSSRDTNSFLVDVST---LQVLKKYETDCPLNTAVITP--L 270 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTT---CCEEEEEECSSCEEEEEECS--S
T ss_pred CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEE-EecCCceEEEEECCC---CceeeeecCCCCceeEEecC--C
Confidence 7888888876 4433323 2334568999999998654 446678899998753 22211 22333456788888 8
Q ss_pred CcEEEEEe
Q 048181 256 QTFWEAAI 263 (310)
Q Consensus 256 G~l~va~~ 263 (310)
|.+.++..
T Consensus 271 ~~~l~~~~ 278 (369)
T 3zwl_B 271 KEFIILGG 278 (369)
T ss_dssp SSEEEEEE
T ss_pred CceEEEee
Confidence 87655443
No 157
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.46 E-value=2.4e-05 Score=72.78 Aligned_cols=153 Identities=14% Similarity=0.124 Sum_probs=99.5
Q ss_pred CcceEEEccCCC-EEEEEeC--CCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EE
Q 048181 35 GGESIAFEPVGG-AFYTGVA--DGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LY 109 (310)
Q Consensus 35 ~Pegia~d~~G~-l~~~d~~--~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-Ly 109 (310)
...+++|.|+|+ ++|+... +.+|+.++..++. ..+. ........+++. ++|+ |+
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~--------------------~~~~~~~~~~~s-pdg~~l~ 282 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT--------------------DGRSNNTEPTWF-PDSQNLA 282 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC--------------------CCSSCEEEEEEC-TTSSEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc--------------------CCCCcccceEEC-CCCCEEE
Confidence 467899999998 4446544 3459999877543 2211 112345678886 5665 65
Q ss_pred EEeCCC---cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEc
Q 048181 110 IADAYS---GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYN 185 (310)
Q Consensus 110 Vad~~~---gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d 185 (310)
++.... .|+.+|.++++.+.+.. .+ .....++++|+ |+ |+++... .....|+.+|
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~~~l~~--~~---~~~~~~~~spd-G~~l~~~~~~---------------~g~~~i~~~d 341 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAPQRITW--EG---SQNQDADVSSD-GKFMVMVSSN---------------GGQQHIAKQD 341 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCCEECCC--SS---SEEEEEEECTT-SSEEEEEEEC---------------SSCEEEEEEE
T ss_pred EEECCCCCcEEEEEECCCCCEEEEec--CC---CcccCeEECCC-CCEEEEEECc---------------CCceEEEEEE
Confidence 554322 48999998876554421 11 23457899995 65 5554321 1235799999
Q ss_pred CCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCC--eEEEEEecC
Q 048181 186 PRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGN--RTLKYWLRG 230 (310)
Q Consensus 186 ~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~--~I~~~~~~~ 230 (310)
..+++.+.+.... ....++|+|||+.|+++....+ .|+.+++++
T Consensus 342 ~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 342 LATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp TTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred CCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 9888876655443 6789999999998888766555 788888764
No 158
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.46 E-value=0.00049 Score=61.66 Aligned_cols=204 Identities=9% Similarity=-0.038 Sum_probs=124.5
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCce---EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGF---TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
...+++|.++|+++++...++.|..++..... ..... +.........+++. +++.++.+
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~-~~~~l~s~ 160 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE-----------------LAGHTGYLSCCRFL-DDNQIVTS 160 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEE-----------------EECCSSCEEEEEEE-ETTEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEE-----------------ecCCCccEEEEEEC-CCCcEEEE
Confidence 45678899999988888888888888765321 11100 00112234466775 57777666
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.....|..+|..+++...... + +-...+.++++| +++++++-.. +|.+..+|..+++.
T Consensus 161 s~d~~i~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~-~~~~l~sg~~-----------------d~~v~~wd~~~~~~ 218 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTTFT---G-HTGDVMSLSLAP-DTRLFVSGAC-----------------DASAKLWDVREGMC 218 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEEC---C-CSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTCSE
T ss_pred ECCCcEEEEECCCCcEEEEEc---C-CCCceEEEEECC-CCCEEEEEeC-----------------CCcEEEEECCCCee
Confidence 655558888988765432221 1 123457899999 4887776432 46788888776654
Q ss_pred EEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeee---cCCCCCceeeeCCCCCCcEEEEEecCCC
Q 048181 192 TVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDII---NFQAKPHNIKRNPGLLQTFWEAAIITRQ 267 (310)
Q Consensus 192 ~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~---~l~g~Pdgl~~d~~~dG~l~va~~~~~~ 267 (310)
.... ..-...+.++|+|+++. +++-+..+.|..+++... ...... ........+++++ +|.+.++....+
T Consensus 219 ~~~~~~h~~~v~~v~~~p~~~~-l~s~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~s~--~g~~l~~g~~d~- 292 (340)
T 1got_B 219 RQTFTGHESDINAICFFPNGNA-FATGSDDATCRLFDLRAD--QELMTYSHDNIICGITSVSFSK--SGRLLLAGYDDF- 292 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECT--TSSEEEEEETTS-
T ss_pred EEEEcCCcCCEEEEEEcCCCCE-EEEEcCCCcEEEEECCCC--cEEEEEccCCcccceEEEEECC--CCCEEEEECCCC-
Confidence 4333 23345689999999984 556667888888887532 111111 1112345688898 998777765542
Q ss_pred CCCCCceeeEEECC-CCcEEEEEec
Q 048181 268 PAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 268 ~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
.+..+|. .++.+..+..
T Consensus 293 -------~i~vwd~~~~~~~~~~~~ 310 (340)
T 1got_B 293 -------NCNVWDALKADRAGVLAG 310 (340)
T ss_dssp -------EEEEEETTTCCEEEEEEC
T ss_pred -------eEEEEEcccCcEeeEeec
Confidence 5666663 4555555543
No 159
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.46 E-value=3.3e-05 Score=71.87 Aligned_cols=189 Identities=14% Similarity=0.115 Sum_probs=113.7
Q ss_pred cceEEEcc-CCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 36 GESIAFEP-VGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 36 Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
-.+++|.| +++++.++..+|.|.-++.+.+ ...+.. .......-..|++.+.+++++++-.
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~-----------------~~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK-----------------GIGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC-----------------CCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE-----------------ccCCCCCEEEEEEeCCCCCEEEEEe
Confidence 56899998 5678888999999999987633 211110 0011223458999754666655544
Q ss_pred CCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 114 YSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 114 ~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
..+ |...|.+++....+... .. .......++++++ |.++++-.. +|.|..+|..+..+.
T Consensus 185 ~D~~v~iwd~~~~~~~~~~~~-~~-~~~~~~~~~~~~~-~~~l~~g~~-----------------dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVFASS-DT-INIWFCSLDVSAS-SRMVVTGDN-----------------VGNVILLNMDGKELW 244 (435)
T ss_dssp SSSCEEEEETTSCEEEEEECC-SS-CSCCCCCEEEETT-TTEEEEECS-----------------SSBEEEEESSSCBCC
T ss_pred CCCEEEEeeccCCceeEEecc-CC-CCccEEEEEECCC-CCEEEEEeC-----------------CCcEeeeccCcceeE
Confidence 434 77788887665544322 11 1123457889994 777666432 467888887644433
Q ss_pred EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 193 VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 193 ~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.+...-..-+.|+|+|+++.++++-...+.|..+++.... ....+ ..-......+++++ +|++.++...
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~sp--dg~~l~s~~~ 316 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR-GKASFLYSLPHRHPVNAACFSP--DGARLLTTDQ 316 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC-SSSCCSBCCBCSSCEEECCBCT--TSSEEEEEES
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc-ccceEEEeeeccccccceeECC--CCCeeEEEcC
Confidence 3322233458899999998788887788888888875422 11111 11112245677787 8876555443
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.45 E-value=2.3e-05 Score=71.15 Aligned_cols=158 Identities=11% Similarity=0.040 Sum_probs=91.6
Q ss_pred eEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCcee-eEEEecCCCeEEEEe----
Q 048181 38 SIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTF-GLALHYATRQLYIAD---- 112 (310)
Q Consensus 38 gia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~-Gla~d~~~g~LyVad---- 112 (310)
+++|.|||..++....++.|+.++.+++........ +...... ...++ .+++++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-----------------~~~~~~~~~~~~~-~dg~~l~~~~~~~ 146 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-----------------PAEWVGYGTWVAN-SDCTKLVGIEIRR 146 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-----------------CTTEEEEEEEEEC-TTSSEEEEEEEEG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-----------------hhhcccccceeEC-CCCCeeccccccC
Confidence 678999998666655678899999885532211100 1111111 12334 566665531
Q ss_pred -------------------CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeC-CCCeEEEEcCCCccCccceeEee
Q 048181 113 -------------------AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQ-GTGVVYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 113 -------------------~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~-~~G~lyvtd~~~~~~~~~~~~~~ 172 (310)
....|+.+|.++++.+.+.... ...++++++| ++..|.++.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~dg~~l~~~~~~~~---------- 211 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-----QWLGHPIYRPYDDSTVAFCHEGPH---------- 211 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSCT----------
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-----ccccccEECCCCCCEEEEEEecCC----------
Confidence 1134899999988776654321 2357889999 7334544432210
Q ss_pred eecCCCceEEEEcCCCCeEEEeecCCC--CCceeEEccCCCEE-EEEecCCC---eEEEEEecC
Q 048181 173 ITNDSTGRLLSYNPRSSQVTVLLRNLT--GPAGVAISVDSSFL-LVSEFTGN---RTLKYWLRG 230 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~~g~~~~~~~~l~--~pnGIa~~~dg~~L-yv~d~~~~---~I~~~~~~~ 230 (310)
.....+|+.+|.++++.+.+..... ....++|+|||+.| |++..... .|+.+++++
T Consensus 212 --~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 212 --DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp --TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred --CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 0123579999987666665544321 23467999999977 44543332 388998864
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.45 E-value=2.9e-05 Score=77.00 Aligned_cols=198 Identities=10% Similarity=-0.016 Sum_probs=108.8
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCc---eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEE
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDG---FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIA 111 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVa 111 (310)
..+++|.|||+.+++.. ++.|+.++.+++ ... .+.........+++. ++|+ |+++
T Consensus 111 v~~~~~SpDg~~l~~~~-~~~i~~~d~~~~~~~~~~-------------------~l~~~~~~~~~~~~S-PDG~~la~~ 169 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPL-GGELYLYDLKQEGKAAVR-------------------QLTHGEGFATDAKLS-PKGGFVSFI 169 (741)
T ss_dssp SCCCEECTTSSEEEEEE-TTEEEEEESSSCSTTSCC-------------------BCCCSSSCEEEEEEC-TTSSEEEEE
T ss_pred cceeEECCCCCEEEEEe-CCcEEEEECCCCCcceEE-------------------EcccCCcccccccCC-CCCCEEEEE
Confidence 46889999998555544 389999987754 211 011222356788997 5666 4444
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCC------------ccccCccceEEeCCCCeEEEEcCCCc-cCc--------cceeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEG------------QAFHFLDGLDVDQGTGVVYFTDASGV-YDF--------RTIVK 170 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g------------~~~~~pndvavd~~~G~lyvtd~~~~-~~~--------~~~~~ 170 (310)
. ...|+.+|.++++...+...... ..+..+.+++++|++..|+++..... ... .....
T Consensus 170 ~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~ 248 (741)
T 2ecf_A 170 R-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDV 248 (741)
T ss_dssp E-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEE
T ss_pred e-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccc
Confidence 3 34699999988876654322111 01223578999996334666532110 000 00000
Q ss_pred eeeecC------CCceEEEEcCCC-CeEEEeec---CCCCCceeEEccCCCEEEEEec----CCCeEEEEEecCCCCCce
Q 048181 171 LNITND------STGRLLSYNPRS-SQVTVLLR---NLTGPAGVAISVDSSFLLVSEF----TGNRTLKYWLRGPRANSF 236 (310)
Q Consensus 171 ~~~~~~------~~G~l~~~d~~~-g~~~~~~~---~l~~pnGIa~~~dg~~Lyv~d~----~~~~I~~~~~~~~~~g~~ 236 (310)
...... ..-+|+.+|..+ ++...+.. .-.....++| |||++|+++.. ....|+.+++.+ +..
T Consensus 249 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~---g~~ 324 (741)
T 2ecf_A 249 IEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS---NQQ 324 (741)
T ss_dssp EEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT---CCE
T ss_pred eEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC---Cce
Confidence 000000 112788899887 76655432 1234578999 99998887754 235688887754 222
Q ss_pred e-e--ecCCC---CCceeeeCCCCCCcEEEE
Q 048181 237 D-I--INFQA---KPHNIKRNPGLLQTFWEA 261 (310)
Q Consensus 237 ~-~--~~l~g---~Pdgl~~d~~~dG~l~va 261 (310)
. + ....+ ....+++.+ ||+++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~sp--dg~~~~~ 353 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLD--DGSILWS 353 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECT--TSCEEEE
T ss_pred EEEEEcCCCCcCCcCCceEECC--CCeEEEE
Confidence 2 1 11111 124677777 7764433
No 162
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.43 E-value=1.6e-05 Score=72.44 Aligned_cols=143 Identities=13% Similarity=0.198 Sum_probs=92.8
Q ss_pred eEEE-EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCC---CC----eEEEEcCC--CccCccceeEeeeecC
Q 048181 107 QLYI-ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG---TG----VVYFTDAS--GVYDFRTIVKLNITND 176 (310)
Q Consensus 107 ~LyV-ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~---~G----~lyvtd~~--~~~~~~~~~~~~~~~~ 176 (310)
.+++ ++...++.++|+++..+..+. ...+|++.+-+. +| .+|+|+.. .+
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~-------~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n-------------- 99 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYN-------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKN-------------- 99 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEEC-------CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCC--------------
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEcc-------CCCcccEEEecccccCCceEeEEEEeCCCCCCC--------------
Confidence 3444 555667999999765554431 134677777661 01 34666643 21
Q ss_pred CCceEEEEcCCCCeEEEee-------cCCCCCceeEE--ccCCC--EEEEEecCCCeEEEEEecCCCCCce--ee---ec
Q 048181 177 STGRLLSYNPRSSQVTVLL-------RNLTGPAGVAI--SVDSS--FLLVSEFTGNRTLKYWLRGPRANSF--DI---IN 240 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~-------~~l~~pnGIa~--~~dg~--~Lyv~d~~~~~I~~~~~~~~~~g~~--~~---~~ 240 (310)
.=++|.+|+.+++++.+. ..+..|.|||+ +++++ ++||++.. +++..|.+.....|.. ++ ..
T Consensus 100 -~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 100 -TIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp -EEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred -eEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEec
Confidence 114577788887777662 34578999999 77543 57777765 7998888753222322 22 45
Q ss_pred CCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCC
Q 048181 241 FQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAF 282 (310)
Q Consensus 241 l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~ 282 (310)
+++-|-|+.+|++ .|.||++.... .+.+|+++
T Consensus 178 lgsq~EgcvvDd~-~g~Lyv~eEd~---------GIw~~da~ 209 (355)
T 3amr_A 178 MNSQTEGMAADDE-YGRLYIAEEDE---------AIWKFSAE 209 (355)
T ss_dssp CSSCEEEEEEETT-TTEEEEEETTT---------EEEEEECS
T ss_pred CCCCcceEEEcCC-CCeEEEecccc---------eEEEEeCC
Confidence 6677999999964 78999999985 48888844
No 163
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.42 E-value=0.00036 Score=63.81 Aligned_cols=193 Identities=15% Similarity=0.087 Sum_probs=113.8
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-eEEE-
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-QLYI- 110 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~LyV- 110 (310)
....+++|.+ +++++++...++.|..++...+....... .+ ...+.........++++ +++ ++++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~-------~~----~~~~~~h~~~v~~~~~~-p~~~~~l~s 149 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR-------EP----VITLEGHTKRVGIVAWH-PTAQNVLLS 149 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC-------SC----SEEEECCSSCEEEEEEC-SSBTTEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC-------Cc----eEEecCCCCeEEEEEEC-cCCCCEEEE
Confidence 3467899999 89989999889999988866431000000 00 00011122345688997 554 4555
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
+.....|..+|..+++....... .+ .-.....++++++ |+.+++-. .+|.|..+|..+++
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~~v~~~~~~~~-~~~l~~~~-----------------~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLGP-DV-HPDTIYSVDWSRD-GALICTSC-----------------RDKRVRVIEPRKGT 209 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEECT-TT-CCSCEEEEEECTT-SSCEEEEE-----------------TTSEEEEEETTTTE
T ss_pred EcCCCEEEEEECCCCCccEEEec-CC-CCCceEEEEECCC-CCEEEEEe-----------------cCCcEEEEeCCCCc
Confidence 44444588889887754332210 11 1234678999994 76665532 24788889987776
Q ss_pred EEEee-cCCC--CCceeEEccCCCEEEEEe--cCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEE
Q 048181 191 VTVLL-RNLT--GPAGVAISVDSSFLLVSE--FTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWE 260 (310)
Q Consensus 191 ~~~~~-~~l~--~pnGIa~~~dg~~Lyv~d--~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~v 260 (310)
..... ..-. .+..++++++++.|++.. ...+.|..+++.......... .........+++++ +|++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~ 283 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDP--DTNIVY 283 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEET--TTTEEE
T ss_pred eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcC--CCCEEE
Confidence 54433 2222 368999999987554442 567889999886432111111 12223466788888 886553
No 164
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.42 E-value=7e-05 Score=68.25 Aligned_cols=193 Identities=8% Similarity=0.028 Sum_probs=111.3
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCC---ceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPD---GFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
...+++|.++|.++++...++.|..++... +...... +.........+++.+.+++++++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~~~~~~~l~s 131 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMAR-----------------FSNHSSSVKTVKFNAKQDNVLAS 131 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEE-----------------CCCSSSCCCEEEECSSSTTBEEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhh-----------------ccCCccceEEEEEcCCCCCEEEE
Confidence 456899999999888888889999888764 1111110 11122345678997432555555
Q ss_pred eCC-CcEEEEeCCCCe------EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 112 DAY-SGLLVVGPNGRL------ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 112 d~~-~gi~~id~~~~~------~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
-.. ..|..+|..+++ .........+ .......++++++++.++++-.. +|.|..+
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v~iw 193 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS-SVDEVISLAWNQSLAHVFASAGS-----------------SNFASIW 193 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC-SSCCCCEEEECSSCTTEEEEESS-----------------SSCEEEE
T ss_pred EcCCCeEEEEECCCCccccccccccccccccC-CCCCeeEEEeCCCCCcEEEEEcC-----------------CCCEEEE
Confidence 443 347778877654 1111111111 22346789999853566666432 4678888
Q ss_pred cCCCCeEEEeecC-------CCCCceeEEccCCCEEEEEecCCC---eEEEEEecCCCCCceeee-cCCCCCceeeeCCC
Q 048181 185 NPRSSQVTVLLRN-------LTGPAGVAISVDSSFLLVSEFTGN---RTLKYWLRGPRANSFDII-NFQAKPHNIKRNPG 253 (310)
Q Consensus 185 d~~~g~~~~~~~~-------l~~pnGIa~~~dg~~Lyv~d~~~~---~I~~~~~~~~~~g~~~~~-~l~g~Pdgl~~d~~ 253 (310)
|..+++....... -...+.++|+|++..++++-...+ .|..+++.....-...+. ........+++.+.
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~ 273 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQ 273 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSS
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCC
Confidence 8877665443332 345689999999865666666666 888888864211111112 22334566777641
Q ss_pred CCCcEEEEEe
Q 048181 254 LLQTFWEAAI 263 (310)
Q Consensus 254 ~dG~l~va~~ 263 (310)
+|++.++..
T Consensus 274 -~~~~l~s~~ 282 (416)
T 2pm9_A 274 -DEHLLLSSG 282 (416)
T ss_dssp -CSSCEEEEE
T ss_pred -CCCeEEEEe
Confidence 344444433
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.41 E-value=6.8e-05 Score=67.91 Aligned_cols=216 Identities=10% Similarity=-0.038 Sum_probs=117.7
Q ss_pred EEEccCCC-EEEEEeCCC--eEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCce-eeEEEecCCCeEEEEeCC
Q 048181 39 IAFEPVGG-AFYTGVADG--RILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRT-FGLALHYATRQLYIADAY 114 (310)
Q Consensus 39 ia~d~~G~-l~~~d~~~g--~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P-~Gla~d~~~g~LyVad~~ 114 (310)
++|.|||+ ++|+...++ +|+.++.+++...... ...... .+.++.+.+..|+++...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-------------------~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-------------------EGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-------------------CSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-------------------eCCCCCccceEEcCCCCEEEEEeCC
Confidence 68999997 555554345 5999998765432110 111111 245786434457777665
Q ss_pred CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCc--cCc-cce--eEeeeecCCCceEEEEcCCCC
Q 048181 115 SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGV--YDF-RTI--VKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~--~~~-~~~--~~~~~~~~~~G~l~~~d~~~g 189 (310)
..|+.+|.++++.+.+.....+ ........+++ +|+.++.-.... +.. ..+ ............|+++|..++
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAE--WVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTT--EEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred CeEEEEECCCCcceeeeechhh--cccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 5699999998876655432211 11111223467 476665321000 000 000 000011234578999999888
Q ss_pred eEEEeecCCCCCceeEEcc-CCCEEEEEecC-----CCeEEEEEecCCCCCceeeecCC-C-CCceeeeCCCCCCc-E-E
Q 048181 190 QVTVLLRNLTGPAGVAISV-DSSFLLVSEFT-----GNRTLKYWLRGPRANSFDIINFQ-A-KPHNIKRNPGLLQT-F-W 259 (310)
Q Consensus 190 ~~~~~~~~l~~pnGIa~~~-dg~~Lyv~d~~-----~~~I~~~~~~~~~~g~~~~~~l~-g-~Pdgl~~d~~~dG~-l-~ 259 (310)
+.+.+...-...+.++++| ||+.|+++... ..+|+.++.++.. ...+.... + .....++++ ||+ | |
T Consensus 179 ~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~sp--dg~~l~~ 254 (388)
T 3pe7_A 179 ESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVP--DGSALVY 254 (388)
T ss_dssp CEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECT--TSSCEEE
T ss_pred ceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECC--CCCEEEE
Confidence 8887776655678999999 99877665543 4589999886531 11121111 1 123467888 886 5 4
Q ss_pred EEEecCCCCCCCCceeeEEECCC-CcE
Q 048181 260 EAAIITRQPAGTPVPIGQRISAF-GAV 285 (310)
Q Consensus 260 va~~~~~~~~~~~~~~v~~~~~~-G~~ 285 (310)
++...... ...+.++|.+ |+.
T Consensus 255 ~~~~~~~~-----~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 255 VSYLKGSP-----DRFIYSADPETLEN 276 (388)
T ss_dssp EEEETTCC-----CEEEEEECTTTCCE
T ss_pred EecCCCCC-----cceEEEEecCCCce
Confidence 44433320 1236677754 443
No 166
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.40 E-value=0.00013 Score=66.72 Aligned_cols=192 Identities=9% Similarity=0.028 Sum_probs=119.3
Q ss_pred CCcceEEEccCC-CEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-E
Q 048181 34 FGGESIAFEPVG-GAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-A 111 (310)
Q Consensus 34 ~~Pegia~d~~G-~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-a 111 (310)
....+++|.++| +++++...++.|..++...+....... ..........++++ +++++++ +
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------~~~~~~~v~~~~~~-~~~~~l~~~ 194 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG----------------PDVHPDTIYSVDWS-RDGALICTS 194 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC----------------TTTCCSCEEEEEEC-TTSSCEEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe----------------cCCCCCceEEEEEC-CCCCEEEEE
Confidence 456789999998 688888889999999977543221110 00122345689997 4665444 4
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.....|..+|..+++...... .+..-..+..+++++ +|+++++... ...+|.|..+|..+++.
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKD--RPHEGTRPVHAVFVS-EGKILTTGFS--------------RMSERQVALWDTKHLEE 257 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEE--CSSCSSSCCEEEECS-TTEEEEEEEC--------------TTCCEEEEEEETTBCSS
T ss_pred ecCCcEEEEeCCCCceeeeec--cCCCCCcceEEEEcC-CCcEEEEecc--------------CCCCceEEEEcCccccC
Confidence 444458888988765433221 111112357889999 4888776411 01246788888765432
Q ss_pred --E-EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecC--CCCCceeeeCCCCCCcEEEE
Q 048181 192 --T-VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINF--QAKPHNIKRNPGLLQTFWEA 261 (310)
Q Consensus 192 --~-~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l--~g~Pdgl~~d~~~dG~l~va 261 (310)
. .....-.....++++||++.|+++-...+.|..|++.....-...+... .+...++++.+ +|.+.++
T Consensus 258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp--~~~~~~s 330 (402)
T 2aq5_A 258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP--KRGLEVN 330 (402)
T ss_dssp CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECC--GGGSCGG
T ss_pred CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEec--cccccee
Confidence 1 1223334578999999999998888888999999987532101122222 24567888888 8766543
No 167
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.40 E-value=6.8e-05 Score=71.15 Aligned_cols=150 Identities=14% Similarity=0.087 Sum_probs=82.0
Q ss_pred ceeeEEEecCCCeEEEEeCC-----------------Cc-EEEEeCCCC------eE--------------EEeeccCCC
Q 048181 95 RTFGLALHYATRQLYIADAY-----------------SG-LLVVGPNGR------LA--------------TQLATGAEG 136 (310)
Q Consensus 95 ~P~Gla~d~~~g~LyVad~~-----------------~g-i~~id~~~~------~~--------------~~~~~~~~g 136 (310)
.-..|+++ ++|.|||+-.. .+ |+||++++. .+ +.++
T Consensus 140 ~g~~l~fg-pDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a----- 213 (463)
T 2wg3_C 140 LGGQLLFG-PDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA----- 213 (463)
T ss_dssp CEEEEEEC-TTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE-----
T ss_pred cCCcEeEC-CCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE-----
Confidence 34579997 79999998421 12 999999873 11 1111
Q ss_pred ccccCccceEEeCCC----C--eEEEEcCCC-ccCccceeEeeeecCCCc---eEEEEcCCCCeEEEeecCCCCCceeEE
Q 048181 137 QAFHFLDGLDVDQGT----G--VVYFTDASG-VYDFRTIVKLNITNDSTG---RLLSYNPRSSQVTVLLRNLTGPAGVAI 206 (310)
Q Consensus 137 ~~~~~pndvavd~~~----G--~lyvtd~~~-~~~~~~~~~~~~~~~~~G---~l~~~d~~~g~~~~~~~~l~~pnGIa~ 206 (310)
..+..|.++++|+++ | .+|.+|... .+.. +.+..+.+....| -++.+.+. .-..|.|++|
T Consensus 214 ~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~-~ei~~i~~G~~yG~~~P~~~~~~~---------~g~Ap~G~~~ 283 (463)
T 2wg3_C 214 HGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSS-ARILQIIKGKDYESEPSLLEFKPF---------SNGPLVGGFV 283 (463)
T ss_dssp ECCSSCCBEEEESSCSSTTCSEEEEEECC------C-EEEEEEC----CCSCCCCEECCC-------------CEEEEEE
T ss_pred ECCCCcceEEECCCCCCcccceEEEecccCCCCCCC-CeEeeeccCCCCCCCCCeEEeeCC---------CCccccceEE
Confidence 135679999999964 4 678898632 1111 1111111111111 11222110 0035678887
Q ss_pred ccC-------CCEEEEEecCCCeEEEEEecCCCCC-ceeee----------cCCCCCceeeeCCCCCCcEEEEEec
Q 048181 207 SVD-------SSFLLVSEFTGNRTLKYWLRGPRAN-SFDII----------NFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 207 ~~d-------g~~Lyv~d~~~~~I~~~~~~~~~~g-~~~~~----------~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
-.. |+ +|+++.. ++|+++.++..... ..+.. ...+.|-++++++ ||.|||+...
T Consensus 284 Y~G~~fP~~~g~-~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~p--dG~Lyv~~~~ 355 (463)
T 2wg3_C 284 YRGCQSERLYGS-YVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDE--LGEVYILSSS 355 (463)
T ss_dssp CCCSSCTTTTTC-EEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECT--TCCEEEEEES
T ss_pred EeCCCChhhcce-EEEecCC-CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECC--CCCEEEEecc
Confidence 542 33 7888886 78999988653211 11111 1235689999999 9999999974
No 168
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.38 E-value=7.1e-05 Score=67.87 Aligned_cols=185 Identities=10% Similarity=0.031 Sum_probs=112.8
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-eC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-DA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d~ 113 (310)
.-.+++|.++|+++++...++.|..++...+...... .........+++.+.+..++++ ..
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~------------------~~h~~~V~~~~~~~~~~~~l~s~s~ 190 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY------------------RAHAAQVTCVAASPHKDSVFLSCSE 190 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE------------------cCcCCceEEEEecCCCCCceeeecc
Confidence 4568999999998888889999999998754322111 0112344578886434456664 33
Q ss_pred CCcEEEEeCCCCeEE-EeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 114 YSGLLVVGPNGRLAT-QLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 114 ~~gi~~id~~~~~~~-~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
...|..+|..+++.. .+.... .-...+.+++++++++++++-. .+|.|..+|..+++..
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~l~sg~-----------------~dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSA---PGYLPTSLAWHPQQSEVFVFGD-----------------ENGTVSLVDTKSTSCV 250 (344)
T ss_dssp TSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEESCC--CC
T ss_pred ccccccccccccceeeeeecce---eeccceeeeecCCCCcceEEec-----------------cCCcEEEEECCCCcEE
Confidence 444778888766532 221111 1234567888886567766533 2467888887766533
Q ss_pred -EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCc-EEEEE
Q 048181 193 -VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQT-FWEAA 262 (310)
Q Consensus 193 -~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~-l~va~ 262 (310)
.+...-..-+.|+|+|||..++++-+..+.|+.++... +... +.+-.+....+++.+ +|. +.++.
T Consensus 251 ~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---~~~~~~~~H~~~V~~v~~sp--~~~~llas~ 318 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL---SELFRSQAHRDFVRDATWSP--LNHSLLTTV 318 (344)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC---CEEEEECCCSSCEEEEEECS--SSTTEEEEE
T ss_pred EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC---CcEEEEcCCCCCEEEEEEeC--CCCeEEEEE
Confidence 23333334589999999876777777788888887653 2221 122234467788888 775 55444
No 169
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.38 E-value=4.8e-05 Score=69.09 Aligned_cols=189 Identities=8% Similarity=-0.046 Sum_probs=112.6
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
...+++|.++|+++++...++.|..++...+...... .........+++.+.+..++++...
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~------------------~~h~~~v~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY------------------NAHSSEVNCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEECTTCSSCEEEEET
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE------------------cCCCCCEEEEEEccCCCceeeeecc
Confidence 4568999999998888888999999998754332111 1122345678886333345554333
Q ss_pred -CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 115 -SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 115 -~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
..|..+|..+++....... ...-..++.++++|+++.++++-. .++.|..+|..+++...
T Consensus 203 dg~v~~wd~~~~~~~~~~~~--~~~~~~v~~v~~sp~~~~~la~g~-----------------~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDF--CASDTIPTSVTWHPEKDDTFACGD-----------------ETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCC--TTCCSCEEEEEECTTSTTEEEEEE-----------------SSSCEEEEESSCGGGCE
T ss_pred CCceEEEECCCCceeeeeee--ccccccccchhhhhcccceEEEee-----------------cccceeEEECCCCcEeE
Confidence 3477778776543211111 111234578889886456665432 23667778876655433
Q ss_pred eecC-CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-eecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 194 LLRN-LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-IINFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 194 ~~~~-l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.... -..-+.|+|+|+++.++++-...+.|+.+++.. +... ..+-.+....+++.+. ||.+.++...
T Consensus 264 ~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~---~~~~~~~~H~~~V~~vafsP~-d~~~l~s~s~ 332 (357)
T 4g56_B 264 TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF---SEVFRDLSHRDFVTGVAWSPL-DHSKFTTVGW 332 (357)
T ss_dssp EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS---CEEEEECCCSSCEEEEEECSS-STTEEEEEET
T ss_pred EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC---CcEeEECCCCCCEEEEEEeCC-CCCEEEEEcC
Confidence 2322 234479999999876677777778888887653 2221 1222334567888731 5776665543
No 170
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.35 E-value=0.00073 Score=61.83 Aligned_cols=181 Identities=12% Similarity=0.014 Sum_probs=112.8
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
...+++|.++|.++++...+|.|..++...+...... .........++++ ...|+.+...
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------------------~~~~~~v~~~~~~--~~~l~~~~~d 195 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM------------------AGHQARVGCLSWN--RHVLSSGSRS 195 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE------------------CCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe------------------cCCCCceEEEEEC--CCEEEEEcCC
Confidence 4678999999998888888899988887643221110 1122344567775 3455555555
Q ss_pred CcEEEEeCCC-Ce-EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 115 SGLLVVGPNG-RL-ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 115 ~gi~~id~~~-~~-~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
..|..+|... +. ...+ .. .-.....++++++ |..+++-.. +|.|..+|..+++..
T Consensus 196 g~i~i~d~~~~~~~~~~~-~~----~~~~v~~~~~~~~-~~~l~s~~~-----------------d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 196 GAIHHHDVRIANHQIGTL-QG----HSSEVCGLAWRSD-GLQLASGGN-----------------DNVVQIWDARSSIPK 252 (401)
T ss_dssp SEEEEEETTSSSCEEEEE-EC----CSSCEEEEEECTT-SSEEEEEET-----------------TSCEEEEETTCSSEE
T ss_pred CCEEEEecccCcceeeEE-cC----CCCCeeEEEEcCC-CCEEEEEeC-----------------CCeEEEccCCCCCcc
Confidence 5577788763 22 2222 11 1234578999994 776665432 467888887766544
Q ss_pred Eee-cCCCCCceeEEccCCCEEEEEec--CCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEe
Q 048181 193 VLL-RNLTGPAGVAISVDSSFLLVSEF--TGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAI 263 (310)
Q Consensus 193 ~~~-~~l~~pnGIa~~~dg~~Lyv~d~--~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~ 263 (310)
... ..-.....++++|++..++++-. ..+.|..+++.. +.... .........+++.+ +|.+.++..
T Consensus 253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~---~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~ 322 (401)
T 4aez_A 253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT---GARVNTVDAGSQVTSLIWSP--HSKEIMSTH 322 (401)
T ss_dssp EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT---CCEEEEEECSSCEEEEEECS--SSSEEEEEE
T ss_pred EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC---CCEEEEEeCCCcEEEEEECC--CCCeEEEEe
Confidence 333 33445689999999887888754 688999998763 22211 22233466788888 887666644
No 171
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.34 E-value=0.00017 Score=64.51 Aligned_cols=190 Identities=7% Similarity=-0.096 Sum_probs=109.8
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE-EEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL-YIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L-yVa 111 (310)
....+++|.++|+++++...++.|..++...+. ..... ..........+++. ++++. +++
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----------------~~~~~~~v~~~~~~-~~~~~l~~~ 114 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV-----------------ILRINRAARCVRWA-PNEKKFAVG 114 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEE-----------------CCCCSSCEEEEEEC-TTSSEEEEE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEE-----------------eecCCCceeEEEEC-CCCCEEEEE
Confidence 456789999999988888888988888765432 11110 01223356688997 45554 445
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC-----
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP----- 186 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~----- 186 (310)
.....|..++.+.+...................++++++ ++.+++-.. +|.+..+|.
T Consensus 115 ~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~-----------------dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 115 SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN-SVLLAAGSC-----------------DFKCRIFSAYIKEV 176 (372)
T ss_dssp ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT-SSEEEEEET-----------------TSCEEEEECCCTTT
T ss_pred eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC-CCEEEEEcC-----------------CCCEEEEEcccccc
Confidence 444446555554433111111111111234678999994 766665332 355666662
Q ss_pred -------------CCCeEEE-eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeC
Q 048181 187 -------------RSSQVTV-LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRN 251 (310)
Q Consensus 187 -------------~~g~~~~-~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d 251 (310)
.+++... +...-...+.++++|++++|+ +-...+.|..+++... ..... ..-......++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA-WVSHDSTVCLADADKK--MAVATLASETLPLLAVTFI 253 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE-EEETTTEEEEEEGGGT--TEEEEEECSSCCEEEEEEE
T ss_pred cccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE-EEeCCCEEEEEECCCC--ceeEEEccCCCCeEEEEEe
Confidence 2233322 222334568999999998554 4557788999988642 11111 2222335778999
Q ss_pred CCCCCcEEEEEec
Q 048181 252 PGLLQTFWEAAII 264 (310)
Q Consensus 252 ~~~dG~l~va~~~ 264 (310)
+ +|.+.++...
T Consensus 254 ~--~~~~l~~~~d 264 (372)
T 1k8k_C 254 T--ESSLVAAGHD 264 (372)
T ss_dssp E--TTEEEEEETT
T ss_pred c--CCCEEEEEeC
Confidence 8 8987776633
No 172
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.34 E-value=0.00076 Score=61.69 Aligned_cols=204 Identities=9% Similarity=-0.003 Sum_probs=120.8
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCC-ceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPD-GFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA- 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa- 111 (310)
....+++|+ ++++++...++.|..++... ...... +........++++. ++++++++
T Consensus 177 ~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------~~~~~~~v~~~~~~-~~~~~l~s~ 235 (401)
T 4aez_A 177 ARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGT------------------LQGHSSEVCGLAWR-SDGLQLASG 235 (401)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEE------------------EECCSSCEEEEEEC-TTSSEEEEE
T ss_pred CceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeE------------------EcCCCCCeeEEEEc-CCCCEEEEE
Confidence 345566673 56677777788888887652 211111 01123356689997 56665554
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.....|..+|..+++....... .-.....+++++++..++++..+ ..+|.+..+|..+++.
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKTN----HNAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGAR 296 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEECC----CSSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCE
T ss_pred eCCCeEEEccCCCCCccEEecC----CcceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCE
Confidence 4444588889877554322211 12346789999964567766432 1247888888877765
Q ss_pred EEeecCCCCCceeEEccCCCEEEEEe-cCCCeEEEEEecCCCCCce-eeecCCCCCceeeeCCCCCCcEEEEEecCCCCC
Q 048181 192 TVLLRNLTGPAGVAISVDSSFLLVSE-FTGNRTLKYWLRGPRANSF-DIINFQAKPHNIKRNPGLLQTFWEAAIITRQPA 269 (310)
Q Consensus 192 ~~~~~~l~~pnGIa~~~dg~~Lyv~d-~~~~~I~~~~~~~~~~g~~-~~~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~ 269 (310)
......-...+.++|+|+++.|+++. ...+.|..+++........ ++..-.+....+++++ +|.+.++....
T Consensus 297 ~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~--dg~~l~s~~~d---- 370 (401)
T 4aez_A 297 VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP--DGRILSTAASD---- 370 (401)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT--TSSEEEEECTT----
T ss_pred EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC--CCCEEEEEeCC----
Confidence 55444445678999999999776653 4678899888864211101 1122234567899999 99876665543
Q ss_pred CCCceeeEEECC-CCcEEE
Q 048181 270 GTPVPIGQRISA-FGAVLD 287 (310)
Q Consensus 270 ~~~~~~v~~~~~-~G~~~~ 287 (310)
+.+..++- +|+.+.
T Consensus 371 ----g~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 371 ----ENLKFWRVYDGDHVK 385 (401)
T ss_dssp ----SEEEEEECCC-----
T ss_pred ----CcEEEEECCCCcccc
Confidence 26767774 455443
No 173
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.34 E-value=0.00034 Score=63.32 Aligned_cols=162 Identities=12% Similarity=0.064 Sum_probs=105.4
Q ss_pred CCCcceEEEccCC-CEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-
Q 048181 33 AFGGESIAFEPVG-GAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI- 110 (310)
Q Consensus 33 ~~~Pegia~d~~G-~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV- 110 (310)
-....+++|.++| +++++...++.|..++..+....... ...........+++.+.++++++
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------------~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI----------------QGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE----------------CCCSTTCBEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee----------------ecCCcCCceeEEEeCCCCCCEEEE
Confidence 3567789999998 88888888999999998743221110 00012334568899742555554
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
+.....|..+|..+.....+... .+ .-.....++++++ ++.+++-. .+|.|..+|.....
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~-~~-~~~~v~~~~~~~~-~~~l~~~~-----------------~d~~i~i~d~~~~~ 196 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKT-DS-WDYWYCCVDVSVS-RQMLATGD-----------------STGRLLLLGLDGHE 196 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECC-CC-SSCCEEEEEEETT-TTEEEEEE-----------------TTSEEEEEETTSCE
T ss_pred EeCCCEEEEEECCCCceEEEecc-CC-CCCCeEEEEECCC-CCEEEEEC-----------------CCCCEEEEECCCCE
Confidence 44444577888887555544321 11 1234678999995 77666532 24778888875444
Q ss_pred EEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 191 VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 191 ~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+..+...-...+.++|+|+++.++++-...+.|..+++..
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 4444444456789999999985667777788999999874
No 174
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.34 E-value=0.0011 Score=59.17 Aligned_cols=192 Identities=8% Similarity=0.019 Sum_probs=115.3
Q ss_pred eCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 28 LFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 28 ~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
.+.+....-.+++|.++|+++++...++.|..++...+....... ........+++. ++|+
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~------------------~~~~~v~~~~~s-~~~~ 110 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP------------------LRSSWVMTCAYA-PSGN 110 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE------------------CSSSCEEEEEEC-TTSS
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee------------------cCCccEEEEEEC-CCCC
Confidence 345555667899999999999999999999999876433211110 112234578886 5666
Q ss_pred EEEEeC-CCcEEEEeCCCCe--EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 108 LYIADA-YSGLLVVGPNGRL--ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 108 LyVad~-~~gi~~id~~~~~--~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++++-. ...+..++..++. .... ....+ .-.....+++.+ ++.++.+. .+|.+..+
T Consensus 111 ~l~s~~~d~~v~iw~~~~~~~~~~~~-~~~~~-h~~~v~~~~~~~-~~~l~s~s------------------~d~~i~~w 169 (340)
T 1got_B 111 YVACGGLDNICSIYNLKTREGNVRVS-RELAG-HTGYLSCCRFLD-DNQIVTSS------------------GDTTCALW 169 (340)
T ss_dssp EEEEEETTCEEEEEETTTCSBSCEEE-EEEEC-CSSCEEEEEEEE-TTEEEEEE------------------TTSCEEEE
T ss_pred EEEEEeCCCeEEEEECccCCCcceeE-EEecC-CCccEEEEEECC-CCcEEEEE------------------CCCcEEEE
Confidence 655433 3336666765432 1111 11111 112345667776 46654432 24678888
Q ss_pred cCCCCeEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-e-ecCCCCCceeeeCCCCCCcEEEE
Q 048181 185 NPRSSQVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-I-INFQAKPHNIKRNPGLLQTFWEA 261 (310)
Q Consensus 185 d~~~g~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~-~~l~g~Pdgl~~d~~~dG~l~va 261 (310)
|..+++...... .-...+.++++|+++ ++++-...+.|..+++.. +... . ..-......+++.+ +|+++++
T Consensus 170 d~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~---~~~~~~~~~h~~~v~~v~~~p--~~~~l~s 243 (340)
T 1got_B 170 DIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVRE---GMCRQTFTGHESDINAICFFP--NGNAFAT 243 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT---CSEEEEECCCSSCEEEEEECT--TSSEEEE
T ss_pred ECCCCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCC---CeeEEEEcCCcCCEEEEEEcC--CCCEEEE
Confidence 877776544333 233457999999998 566777788898888753 2221 1 22223456788888 8887666
Q ss_pred EecC
Q 048181 262 AIIT 265 (310)
Q Consensus 262 ~~~~ 265 (310)
....
T Consensus 244 ~s~d 247 (340)
T 1got_B 244 GSDD 247 (340)
T ss_dssp EETT
T ss_pred EcCC
Confidence 5443
No 175
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00027 Score=64.05 Aligned_cols=200 Identities=9% Similarity=0.017 Sum_probs=115.4
Q ss_pred CCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe
Q 048181 33 AFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD 112 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad 112 (310)
-....+++|.++++.+++...++.|..++...+................ ..............+++. +++.++++.
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 224 (425)
T 1r5m_A 149 RAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI---NAENHSGDGSLGVDVEWV-DDDKFVIPG 224 (425)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------------------CCCBSCCEEE-ETTEEEEEC
T ss_pred CccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce---eeccccCCcceeeEEEEc-CCCEEEEEc
Confidence 3457789999999988888889999999986543221111000000000 000000011114567776 567776665
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
....|..+|..+++....... .-.....++++++ ++.+++-. .+|.+..+|..+++..
T Consensus 225 ~~g~i~~~d~~~~~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-----------------~d~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 225 PKGAIFVYQITEKTPTGKLIG----HHGPISVLEFNDT-NKLLLSAS-----------------DDGTLRIWHGGNGNSQ 282 (425)
T ss_dssp GGGCEEEEETTCSSCSEEECC----CSSCEEEEEEETT-TTEEEEEE-----------------TTSCEEEECSSSBSCS
T ss_pred CCCeEEEEEcCCCceeeeecc----CCCceEEEEECCC-CCEEEEEc-----------------CCCEEEEEECCCCccc
Confidence 444588888876543221111 1133578999994 76555532 2467888887655433
Q ss_pred Eee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecC
Q 048181 193 VLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 193 ~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
... ..-.....++++|++ ++++-...+.|..+++.. +.... .........+++.+ +|++.++....
T Consensus 283 ~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d 351 (425)
T 1r5m_A 283 NCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ---NTLLALSIVDGVPIFAGRISQ--DGQKYAVAFMD 351 (425)
T ss_dssp EEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT---TEEEEEEECTTCCEEEEEECT--TSSEEEEEETT
T ss_pred eEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC---CcEeEecccCCccEEEEEEcC--CCCEEEEEECC
Confidence 222 233456899999998 556667788999998753 22211 22233467889998 89876665543
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.28 E-value=0.0001 Score=72.04 Aligned_cols=156 Identities=11% Similarity=-0.048 Sum_probs=92.2
Q ss_pred CcceEEEccCCCEEEEEeCC----------CeEEEEECCC------ceEEeeeecCCCCccccCCCccccCC-CCCCcee
Q 048181 35 GGESIAFEPVGGAFYTGVAD----------GRILKYQAPD------GFTDFAFTTPTRSKAVCDGTTNLDLG-PICRRTF 97 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~----------g~I~r~~~~g------~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~P~ 97 (310)
...+++|.|||+.++....+ .+|+.++.++ +.... +. .......
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------------------l~~~~~~~~~ 191 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE-------------------LSDDAHRFVT 191 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE-------------------SSCSCSSEEC
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE-------------------EEecCCCccc
Confidence 35678999999744443322 4788888776 32111 01 1112345
Q ss_pred eEEEecCCCe-EEEEeCC--------CcEEEEeCC-CC---eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccC
Q 048181 98 GLALHYATRQ-LYIADAY--------SGLLVVGPN-GR---LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYD 164 (310)
Q Consensus 98 Gla~d~~~g~-LyVad~~--------~gi~~id~~-~~---~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~ 164 (310)
.+++. ++|+ |+++... ..|+.+|.+ ++ +.+.+.... -.....++++|+ |++|++....
T Consensus 192 ~~~~S-pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----~~~~~~~~~spd-g~l~~~~~~~--- 262 (662)
T 3azo_A 192 GPRLS-PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----EEAIAQAEWAPD-GSLIVATDRT--- 262 (662)
T ss_dssp CCEEC-TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET----TBCEEEEEECTT-SCEEEEECTT---
T ss_pred CceEC-CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC----CceEcceEECCC-CeEEEEECCC---
Confidence 67786 5664 5544322 248889988 46 444443211 123567889994 8888765322
Q ss_pred ccceeEeeeecCCCceEEEEcCCCCeEEEeecCC-CC--------CceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 165 FRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNL-TG--------PAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 165 ~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l-~~--------pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
...+|+++|.++++.+.+...- .. ...++++++++.+|.+.....+|+++++++
T Consensus 263 ------------~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 263 ------------GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp ------------SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred ------------CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 1237999998777766654321 11 357899999986555544455778887754
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.28 E-value=0.0001 Score=72.15 Aligned_cols=213 Identities=12% Similarity=-0.004 Sum_probs=117.2
Q ss_pred eEEEc--cCCC--EEEEEeCCCeEEEEECC----CceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 38 SIAFE--PVGG--AFYTGVADGRILKYQAP----DGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 38 gia~d--~~G~--l~~~d~~~g~I~r~~~~----g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
.++|. |||+ ++|+...+.+|+.++.+ +....+... ...........++++++...|+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~---------------~~~~~~~~~~~~~~spDg~~l~ 145 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV---------------SAVGGGLRWADPVLLPERGEVW 145 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCC---------------CCSTTCEEEEEEEEETTTTEEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCC---------------ccCCCCccccCcEECCCCCEEE
Confidence 45555 7875 45665557889999876 333322100 0000123456889974334565
Q ss_pred EEeCC----------CcEEEEeCCC------CeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeee
Q 048181 110 IADAY----------SGLLVVGPNG------RLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNI 173 (310)
Q Consensus 110 Vad~~----------~gi~~id~~~------~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~ 173 (310)
++... ..|+.++.++ ++.+.+.. .+. .....++++|++..|+++......
T Consensus 146 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~--~~~--~~~~~~~~SpDG~~la~~~~~~~~---------- 211 (662)
T 3azo_A 146 CMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD--DAH--RFVTGPRLSPDGRQAVWLAWDHPR---------- 211 (662)
T ss_dssp EEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC--SCS--SEECCCEECTTSSEEEEEEECTTC----------
T ss_pred EEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe--cCC--CcccCceECCCCCEEEEEECCCCC----------
Confidence 54322 2489999988 66655530 111 245678999963346555422100
Q ss_pred ecCCCceEEEEcCC-CC---eEEEeecC-CCCCceeEEccCCCEEEEEecCCC--eEEEEEecCCCCCcee-e-e---cC
Q 048181 174 TNDSTGRLLSYNPR-SS---QVTVLLRN-LTGPAGVAISVDSSFLLVSEFTGN--RTLKYWLRGPRANSFD-I-I---NF 241 (310)
Q Consensus 174 ~~~~~G~l~~~d~~-~g---~~~~~~~~-l~~pnGIa~~~dg~~Lyv~d~~~~--~I~~~~~~~~~~g~~~-~-~---~l 241 (310)
..-....|+.+|.+ ++ +.+.+..+ -.....++|+|||+ +|++....+ +|+++++++ +..+ + . ..
T Consensus 212 ~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~~~~ 287 (662)
T 3azo_A 212 MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT---GAATQLCRREEEF 287 (662)
T ss_dssp CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT---CCEEESSCCSSBS
T ss_pred CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC---Cceeecccccccc
Confidence 00012468888877 46 55555543 34667899999999 555544444 788887643 2222 1 1 11
Q ss_pred --C-CC--CceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecC
Q 048181 242 --Q-AK--PHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 242 --~-g~--Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p 292 (310)
| -. ...+++.+ +|.+++.... .. ..+.++|.++..+..+..+
T Consensus 288 ~~p~w~~~~~~~~~~~--~~~~~~~~~~-~~------~~l~~~d~~~~~~~~l~~~ 334 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLA--NGLIAVVHGK-GA------AVLGILDPESGELVDAAGP 334 (662)
T ss_dssp SCCCCSTTCCSEEECT--TSCEEEEEBS-SS------CEEEEEETTTTEEEECCSS
T ss_pred cCccccccCceEeEeC--CCEEEEEEEc-Cc------cEEEEEECCCCcEEEecCC
Confidence 0 01 23577777 7887766544 32 3566667665445555444
No 178
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.26 E-value=0.00029 Score=65.37 Aligned_cols=202 Identities=10% Similarity=0.113 Sum_probs=113.7
Q ss_pred CCcceEEEccC-CCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEE
Q 048181 34 FGGESIAFEPV-GGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVa 111 (310)
..+..+++.++ ++++++...+|.|+.++......... ... .......+........+|+++ +++. ++++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~---~~~-----~~~~~~~~~~h~~~v~~l~~~-~~~~~~l~s 199 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE---PSG-----ECQPDLRLRGHQKEGYGLSWN-PNLNGYLLS 199 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC---TTC-----CCCCSEEEECCSSCCCCEEEC-TTSTTEEEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC---ccc-----cCCCcEEecCCCCCeEEEEeC-CCCCCeEEE
Confidence 35778999997 67788888889888887643100000 000 000000001122345689997 4444 5554
Q ss_pred eC-CCcEEEEeCCCCeE--EEe--eccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 112 DA-YSGLLVVGPNGRLA--TQL--ATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 112 d~-~~gi~~id~~~~~~--~~~--~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
.. ...|..++...+.. ..+ .....+ .-...+++++++.++.++++... +|.|..+|.
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~d~ 261 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIWDT 261 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEET
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEEEC
Confidence 44 34477777765211 000 011111 22346789999854677776543 477888887
Q ss_pred CCC----eEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCC-cEEEE
Q 048181 187 RSS----QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQ-TFWEA 261 (310)
Q Consensus 187 ~~g----~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG-~l~va 261 (310)
.++ .+..+...-..++.|+|+|+++.++++-...+.|..+++.....-...+....+....+++.+ +| .++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp--~~~~~l~s 339 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--HNETILAS 339 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS--SCTTEEEE
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC--CCCCEEEE
Confidence 654 222332333467899999999888888888999999998642111111122233456788888 77 45555
Q ss_pred Eec
Q 048181 262 AII 264 (310)
Q Consensus 262 ~~~ 264 (310)
...
T Consensus 340 ~~~ 342 (430)
T 2xyi_A 340 SGT 342 (430)
T ss_dssp EET
T ss_pred EeC
Confidence 443
No 179
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.24 E-value=0.0022 Score=56.35 Aligned_cols=156 Identities=10% Similarity=-0.015 Sum_probs=97.7
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-Ee
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-AD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad 112 (310)
....+++|.|+|.++++...++.|..++...+....... .....-..+++. +++++++ +.
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~------------------~~~~~v~~~~~~-~~~~~l~s~s 74 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ------------------VTETPVRAGKFI-ARKNWIIVGS 74 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------------------CCSSCEEEEEEE-GGGTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee------------------ccCCcEEEEEEe-CCCCEEEEEC
Confidence 356789999999989999999999999987543221110 111223467786 4555544 44
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC-eE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS-QV 191 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g-~~ 191 (310)
....|..+|.++++...... + +-...+.++++|+ +.+++|-.. +|.+..+|..++ ..
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~---~-h~~~v~~~~~~~~-~~~l~sgs~-----------------D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFE---A-HPDYIRSIAVHPT-KPYVLSGSD-----------------DLTVKLWNWENNWAL 132 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEE---C-CSSCEEEEEECSS-SSEEEEEET-----------------TSCEEEEEGGGTTEE
T ss_pred CCCEEEEEECCCCcEEEEEe---C-CCCcEEEEEEcCC-CCEEEEECC-----------------CCeEEEEECCCCcch
Confidence 44458888887765432211 1 1234678999994 777666432 466777776544 33
Q ss_pred EE-eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 192 TV-LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 192 ~~-~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.. +...-..-+.++|+|++..++++-...+.|..+++..
T Consensus 133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 22 2223334589999994333667777888999888753
No 180
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.00064 Score=63.31 Aligned_cols=209 Identities=7% Similarity=-0.007 Sum_probs=122.7
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC---CeEEE-
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT---RQLYI- 110 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~---g~LyV- 110 (310)
.+.+++|.++|..+++...++.|+.++......... + ...+.........+++. ++ +++++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~----------~----~~~~~~h~~~v~~~~~s-p~~~~~~~l~s 215 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF----------T----QEPILGHVSMLTDVHLI-KDSDGHQFIIT 215 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC----------C----CCCSEECSSCEEEEEEE-ECTTSCEEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc----------c----ceeeecccCceEEEEEc-CCCCCCcEEEE
Confidence 567999999999888888889999888653221000 0 00001122345688997 45 65554
Q ss_pred EeCCCcEEEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 111 ADAYSGLLVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
++....|..+|..+++. ..+. .+ .-...+.++++ + |+++++-. .+|.|..+|..++
T Consensus 216 ~~~d~~i~vwd~~~~~~~~~~~---~~-h~~~v~~~~~s-d-~~~l~s~~-----------------~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 216 SDRDEHIKISHYPQCFIVDKWL---FG-HKHFVSSICCG-K-DYLLLSAG-----------------GDDKIFAWDWKTG 272 (450)
T ss_dssp EETTSCEEEEEESCTTCEEEEC---CC-CSSCEEEEEEC-S-TTEEEEEE-----------------SSSEEEEEETTTC
T ss_pred EcCCCcEEEEECCCCceeeeee---cC-CCCceEEEEEC-C-CCEEEEEe-----------------CCCeEEEEECCCC
Confidence 44444577778766543 2221 11 12346788888 5 66655533 2467777877666
Q ss_pred eEEEeecC--------------------------CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---ec
Q 048181 190 QVTVLLRN--------------------------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---IN 240 (310)
Q Consensus 190 ~~~~~~~~--------------------------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---~~ 240 (310)
+....... -....+|+++|++++|+++....+.|..|++.....+..+. ..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 273 KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence 54332210 11346899999999888887678899999982112222222 22
Q ss_pred CCCCCceeeeCCCCCCcEEEEEecCCCCC-CCCceeeEEECCCCc
Q 048181 241 FQAKPHNIKRNPGLLQTFWEAAIITRQPA-GTPVPIGQRISAFGA 284 (310)
Q Consensus 241 l~g~Pdgl~~d~~~dG~l~va~~~~~~~~-~~~~~~v~~~~~~G~ 284 (310)
..+.+..+++++ + .+|++......+. ....-.+..++.++.
T Consensus 353 ~~~~v~~~~~~~--~-~~~v~~~~~~~~~~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 353 FPYNVISLSAHN--D-EFQVTLDNKESSGVQKNFAKFIEYNLNEN 394 (450)
T ss_dssp CSSCEEEEEEET--T-EEEEEECCTTCCSSCCCSEEEEEEETTTT
T ss_pred cCCceEEEEecC--C-cEEEEEecccCCCCCCcceEEEEEEcCCC
Confidence 235688899998 5 5777765542110 001125677776543
No 181
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.23 E-value=0.00051 Score=62.48 Aligned_cols=188 Identities=10% Similarity=0.006 Sum_probs=109.3
Q ss_pred CcceEEEccCCCEEEEEe--CCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe
Q 048181 35 GGESIAFEPVGGAFYTGV--ADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~--~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad 112 (310)
....++|.|||+++.+.. .++.|.-++.......... ........+++. ++|+++++-
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-------------------~~~~~V~~v~fs-pdg~~l~s~ 194 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-------------------ETRGEVKDLHFS-TDGKVVAYI 194 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-------------------ECSSCCCEEEEC-TTSSEEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-------------------CCCCceEEEEEc-cCCceEEec
Confidence 356799999998766544 4678888888755433211 011235689997 688877765
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
...++.+++..+++...... ..+ +-...+.++++|+ |..+++-.... ...-.++.++.......
T Consensus 195 s~~~~~~~~~~~~~~~~~~~-~~~-~~~~v~~v~fspd-g~~l~~~s~d~-------------~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 195 TGSSLEVISTVTGSCIARKT-DFD-KNWSLSKINFIAD-DTVLIAASLKK-------------GKGIVLTKISIKSGNTS 258 (365)
T ss_dssp CSSCEEEEETTTCCEEEEEC-CCC-TTEEEEEEEEEET-TEEEEEEEESS-------------SCCEEEEEEEEETTEEE
T ss_pred cceeEEEEEeccCcceeeee-cCC-CCCCEEEEEEcCC-CCEEEEEecCC-------------cceeEEeecccccceec
Confidence 56668888776654322111 111 1123568999994 88777643210 00113444443323221
Q ss_pred -----EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce--eeec-CCCCCceeeeCCCCCCcEEEEEec
Q 048181 193 -----VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF--DIIN-FQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 193 -----~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~--~~~~-l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.+......-+.++|+|||++ +++-+..+.|..+++.. +.. .+.. -.+....+++.+ ||.+.++...
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs~D~~V~iwd~~~---~~~~~~~~~gH~~~V~~v~fSp--dg~~laS~S~ 332 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGEL-AVLASNDNSIALVKLKD---LSMSKIFKQAHSFAITEVTISP--DSTYVASVSA 332 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCE-EEEEETTSCEEEEETTT---TEEEEEETTSSSSCEEEEEECT--TSCEEEEEET
T ss_pred ceeeeeecCCCCCeEeEEECCCCCc-eEEEcCCCEEEEEECCC---CcEEEEecCcccCCEEEEEECC--CCCEEEEEeC
Confidence 12223334578999999984 45556678888888753 222 1111 123457899999 9987776544
No 182
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.22 E-value=0.00026 Score=69.72 Aligned_cols=173 Identities=14% Similarity=0.117 Sum_probs=96.3
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCC-----ce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPD-----GF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ- 107 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g-----~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~- 107 (310)
...+++|.|||+.++. ..++.|+.++.++ +. ..+...+. .....|.. .......++.++++. ++|+
T Consensus 122 ~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~---~~~~~g~~--~~~ee~~~~~~~~~S-pDg~~ 194 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGT---ETLVYGQA--VHQREFGIEKGTFWS-PKGSC 194 (706)
T ss_dssp CCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCB---TTEEESSC--CGGGCTTCCCSEEEC-TTSSE
T ss_pred cccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCC---CCeEcccc--hhhhhcCCCceEEEC-CCCCE
Confidence 4667899999975444 3578899888764 32 22110000 00000000 000112345789997 5554
Q ss_pred EEEEe---------------------------------CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-
Q 048181 108 LYIAD---------------------------------AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV- 153 (310)
Q Consensus 108 LyVad---------------------------------~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~- 153 (310)
|+++. ....|+.+|.++++...+... ...-..+..++++|+ |+
T Consensus 195 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spd-g~~ 271 (706)
T 2z3z_A 195 LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG--EPKEKFLTNLSWSPD-ENI 271 (706)
T ss_dssp EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC--SCTTCEEEEEEECTT-SSE
T ss_pred EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC--CCCceeEeeEEEECC-CCE
Confidence 55553 112388889888776544321 112234678999995 65
Q ss_pred EEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC-eEEEeecC--C---CCCceeEEcc--CCCEEEEEecC-CCeEE
Q 048181 154 VYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS-QVTVLLRN--L---TGPAGVAISV--DSSFLLVSEFT-GNRTL 224 (310)
Q Consensus 154 lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g-~~~~~~~~--l---~~pnGIa~~~--dg~~Lyv~d~~-~~~I~ 224 (310)
|+++.... ......|+.+|..++ ..+.+... - ...+.++|+| ||++||+++.. ..+||
T Consensus 272 l~~~~~~~-------------~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 272 LYVAEVNR-------------AQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEEEEECT-------------TSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred EEEEEeCC-------------CCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 66643221 012357889998887 55544321 1 1237899999 99977766543 35778
Q ss_pred EEEecC
Q 048181 225 KYWLRG 230 (310)
Q Consensus 225 ~~~~~~ 230 (310)
.++.++
T Consensus 339 ~~~~~~ 344 (706)
T 2z3z_A 339 LYDTTG 344 (706)
T ss_dssp EEETTS
T ss_pred EEECCC
Confidence 777543
No 183
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.22 E-value=0.0018 Score=59.71 Aligned_cols=204 Identities=7% Similarity=-0.011 Sum_probs=122.4
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-e
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-D 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d 112 (310)
....+++|.++|.++++...++.|.-++..+...... +.........+++. ++++.+++ .
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~------------------~~~h~~~V~~v~~~-p~~~~l~s~s 211 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT------------------MHGHDHNVSSVSIM-PNGDHIVSAS 211 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC------------------CCCCSSCEEEEEEC-SSSSEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE------------------EcCCCCCEEEEEEe-CCCCEEEEEe
Confidence 3456788999998888888888888888764321110 01122345678887 56665554 4
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
....|..+|..++....... + +-...+.+++++ +|.++++-.. +|.+..+|..+++..
T Consensus 212 ~D~~i~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~-~g~~l~s~s~-----------------D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 212 RDKTIKMWEVQTGYCVKTFT---G-HREWVRMVRPNQ-DGTLIASCSN-----------------DQTVRVWVVATKECK 269 (410)
T ss_dssp TTSEEEEEETTTCCEEEEEE---C-CSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCcEEEEEe---C-CCccEEEEEECC-CCCEEEEEcC-----------------CCeEEEEECCCCcee
Confidence 44447788887765322111 1 123456788888 4887776432 466777777666544
Q ss_pred Eee-cCCCCCceeEEccC--------------------CCEEEEEecCCCeEEEEEecCCCCCcee-e-ecCCCCCceee
Q 048181 193 VLL-RNLTGPAGVAISVD--------------------SSFLLVSEFTGNRTLKYWLRGPRANSFD-I-INFQAKPHNIK 249 (310)
Q Consensus 193 ~~~-~~l~~pnGIa~~~d--------------------g~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~-~~l~g~Pdgl~ 249 (310)
... ..-...+.++|+|+ |. ++++-+..+.|..+++.. +... . .+-.+....++
T Consensus 270 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~---~~~~~~~~~h~~~v~~v~ 345 (410)
T 1vyh_C 270 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVST---GMCLMTLVGHDNWVRGVL 345 (410)
T ss_dssp EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTT---TEEEEEEECCSSCEEEEE
T ss_pred eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCC---CceEEEEECCCCcEEEEE
Confidence 332 22334578888886 44 566777788899888753 2221 1 22233456789
Q ss_pred eCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 250 RNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 250 ~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
+++ +|.+.++....+ .+..+|. .++.+..+...
T Consensus 346 ~~~--~g~~l~s~s~D~--------~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 346 FHS--GGKFILSCADDK--------TLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp ECS--SSSCEEEEETTT--------EEEEECCTTSCCCEEEECC
T ss_pred EcC--CCCEEEEEeCCC--------eEEEEECCCCceEEEEcCC
Confidence 998 887666554432 5666664 45555555443
No 184
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.21 E-value=0.0024 Score=55.91 Aligned_cols=155 Identities=9% Similarity=0.094 Sum_probs=97.3
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-e
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-D 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d 112 (310)
....+++|.++|+++++...++.|..++...+...... .........+++. ++++++++ .
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------------~~~~~~v~~~~~~-~~~~~l~s~~ 126 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------KGHSNYVFCCNFN-PQSNLIVSGS 126 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE------------------ECCSSCEEEEEEC-SSSSEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE------------------cCCCCCEEEEEEc-CCCCEEEEEe
Confidence 45678999999998888888999999987643221110 0112234578887 55655554 4
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
....|..+|..+++....... .-.....++++++ |.++++-.. +|.+..+|..+++..
T Consensus 127 ~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~~-----------------d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 127 FDESVRIWDVKTGKCLKTLPA----HSDPVSAVHFNRD-GSLIVSSSY-----------------DGLCRIWDTASGQCL 184 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECC----CSSCEEEEEECTT-SSEEEEEET-----------------TSCEEEEETTTCCEE
T ss_pred CCCcEEEEECCCCEEEEEecC----CCCcEEEEEEcCC-CCEEEEEeC-----------------CCcEEEEECCCCcee
Confidence 444588889877654322111 1123567899984 776665432 467888887666543
Q ss_pred E-eec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 193 V-LLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 193 ~-~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
. +.. .....+.++++|++++| ++-+..+.|..+++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 185 KTLIDDDNPPVSFVKFSPNGKYI-LAATLDNTLKLWDYSK 223 (312)
T ss_dssp EEECCSSCCCEEEEEECTTSSEE-EEEETTTEEEEEETTT
T ss_pred eEEeccCCCceEEEEECCCCCEE-EEEcCCCeEEEEECCC
Confidence 2 222 22234679999999855 4556678898888753
No 185
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.20 E-value=0.0014 Score=59.64 Aligned_cols=162 Identities=12% Similarity=0.091 Sum_probs=100.9
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
.+.-....+++|.++|.++++...++.|..++...+. ..+. ........+++. ++++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--------------------~h~~~v~~~~~~-~~~~ 194 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI--------------------GHRATVTDIAII-DRGR 194 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE--------------------CCSSCEEEEEEE-TTTT
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc--------------------CCCCcEEEEEEc-CCCC
Confidence 3444567789999999988898899999999976432 1221 122345688997 5665
Q ss_pred EEE-EeCCCcEEEEeCCCCeEEEeeccCCCc--------------------cccCccceEEeCCCCeEEEEcCCCccCcc
Q 048181 108 LYI-ADAYSGLLVVGPNGRLATQLATGAEGQ--------------------AFHFLDGLDVDQGTGVVYFTDASGVYDFR 166 (310)
Q Consensus 108 LyV-ad~~~gi~~id~~~~~~~~~~~~~~g~--------------------~~~~pndvavd~~~G~lyvtd~~~~~~~~ 166 (310)
+++ +.....|..+|..+++.........+. .....+.+++++ +|+.+++-.
T Consensus 195 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~------- 266 (420)
T 3vl1_A 195 NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGH------- 266 (420)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEE-------
T ss_pred EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEc-------
Confidence 544 444444888888776543322211000 012234556666 365555432
Q ss_pred ceeEeeeecCCCceEEEEcCCCCeEEEee-c-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 167 TIVKLNITNDSTGRLLSYNPRSSQVTVLL-R-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 167 ~~~~~~~~~~~~G~l~~~d~~~g~~~~~~-~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.+|.|..+|..+++..... . .-.....++|+|+++.++++-...+.|..+++..
T Consensus 267 ----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 267 ----------VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp ----------TTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred ----------CCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 3577888888766543322 2 2235689999999984566667788999999864
No 186
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.20 E-value=2.5e-05 Score=75.23 Aligned_cols=124 Identities=17% Similarity=0.257 Sum_probs=79.4
Q ss_pred CCCCcceEEEcc-CCCEEEEEeC---------------------CCeEEEEECCCc--------eEEeeeecCCCCcc--
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVA---------------------DGRILKYQAPDG--------FTDFAFTTPTRSKA-- 79 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~---------------------~g~I~r~~~~g~--------~~~~~~~~~~~~~~-- 79 (310)
.+.+||+++++| +|.+|++-.. .|.|+|+.+++. +..+...+......
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 456899999998 5787777532 288999986531 33333222110000
Q ss_pred ccCCCccccCCCCCCceeeEEEecCCCeEEE-EeCC------------CcEEEEeCCCCeEEEeeccCCCccccCccceE
Q 048181 80 VCDGTTNLDLGPICRRTFGLALHYATRQLYI-ADAY------------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLD 146 (310)
Q Consensus 80 ~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad~~------------~gi~~id~~~~~~~~~~~~~~g~~~~~pndva 146 (310)
...|.........+..|.+|++| ++|+||+ +|.. ++++++++++++++.++... ....|||++
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---~~aEpnGia 537 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---IGCEVTGIS 537 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---TTCEEEEEE
T ss_pred cccCccCccccCccCCCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---CCccccCCE
Confidence 00000011112457889999998 7899999 6752 25999999888888776432 234689999
Q ss_pred EeCCCCeEEEEcC
Q 048181 147 VDQGTGVVYFTDA 159 (310)
Q Consensus 147 vd~~~G~lyvtd~ 159 (310)
++|+...|||+-.
T Consensus 538 fSPD~ktLfV~vQ 550 (592)
T 4a9v_A 538 FSPDQKTLFVGIQ 550 (592)
T ss_dssp ECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEEe
Confidence 9997667888753
No 187
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.18 E-value=0.0015 Score=60.24 Aligned_cols=153 Identities=10% Similarity=0.066 Sum_probs=99.2
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce-E-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF-T-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
....+++|.|++.++++...++.|..++...+. . .+. ........++++ ++|+++++
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~--------------------~h~~~V~~v~~~-~~~~~l~s 167 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK--------------------GHTDSVQDISFD-HSGKLLAS 167 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC--------------------CCSSCEEEEEEC-TTSSEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe--------------------ccCCcEEEEEEc-CCCCEEEE
Confidence 345689999999989999999999999976432 1 111 112345678997 56766654
Q ss_pred e-CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 112 D-AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 112 d-~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
- ....|..+|..+++... ...+ +-...+.++++|+ |+.+++-+ .+|.+..+|..++.
T Consensus 168 gs~D~~i~iwd~~~~~~~~---~~~~-h~~~V~~v~~~p~-~~~l~s~s-----------------~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECIR---TMHG-HDHNVSSVSIMPN-GDHIVSAS-----------------RDKTIKMWEVQTGY 225 (410)
T ss_dssp EETTSCCCEEETTSSCEEE---CCCC-CSSCEEEEEECSS-SSEEEEEE-----------------TTSEEEEEETTTCC
T ss_pred EeCCCeEEEEeCCCCceeE---EEcC-CCCCEEEEEEeCC-CCEEEEEe-----------------CCCeEEEEECCCCc
Confidence 3 33347777877654322 1222 1234678999994 77666543 24778888877665
Q ss_pred EE-EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 191 VT-VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 191 ~~-~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.. .+...-..-+.+++++||+ ++++-...+.|..+++..
T Consensus 226 ~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 226 CVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp EEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 43 3333334567899999998 556666778888887753
No 188
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.17 E-value=0.00068 Score=60.88 Aligned_cols=190 Identities=11% Similarity=-0.010 Sum_probs=104.3
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-eC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-DA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d~ 113 (310)
....++|.|+|.++.+...++.|.-++..++....... ........-..+++. ++|+++++ ..
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~---------------~~~~h~~~v~~~~~s-p~g~~l~s~s~ 81 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV---------------LSEGHQRTVRKVAWS-PCGNYLASASF 81 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE---------------ECSSCSSCEEEEEEC-TTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee---------------eccccCCcEEEEEEC-CCCCEEEEEEC
Confidence 34589999999988888889988888765432110000 000112234678997 56665554 33
Q ss_pred CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe-E-
Q 048181 114 YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ-V- 191 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~-~- 191 (310)
...+...+...+....+. ...+ +-...+.++++|+ |+++++-.. +|.+..+|..++. .
T Consensus 82 D~~v~iw~~~~~~~~~~~-~~~~-h~~~v~~v~~sp~-~~~l~s~s~-----------------D~~v~iwd~~~~~~~~ 141 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVT-TLEG-HENEVKSVAWAPS-GNLLATCSR-----------------DKSVWVWEVDEEDEYE 141 (345)
T ss_dssp TSCEEEEEECCC-EEEEE-EECC-CSSCEEEEEECTT-SSEEEEEET-----------------TSCEEEEEECTTSCEE
T ss_pred CCcEEEEEccCCCeEEEE-EccC-CCCCceEEEEeCC-CCEEEEEEC-----------------CCeEEEEECCCCCCeE
Confidence 334555555544322221 1222 2234678999994 877776432 3556555544332 1
Q ss_pred --EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCc-eeeecCCCCCceeeeCCCCCCcEEEEEe
Q 048181 192 --TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANS-FDIINFQAKPHNIKRNPGLLQTFWEAAI 263 (310)
Q Consensus 192 --~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~-~~~~~l~g~Pdgl~~d~~~dG~l~va~~ 263 (310)
..+...-...+.++|+|++++ +++-+..+.|..++........ ..+.+-.+....+++++ +|++.++..
T Consensus 142 ~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp--~g~~l~s~s 213 (345)
T 3fm0_A 142 CVSVLNSHTQDVKHVVWHPSQEL-LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP--SGQRLASCS 213 (345)
T ss_dssp EEEEECCCCSCEEEEEECSSSSC-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred EEEEecCcCCCeEEEEECCCCCE-EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC--CCCEEEEEe
Confidence 122222334578999999984 5555667778877765321000 01111123345677777 776655543
No 189
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.17 E-value=0.0007 Score=61.73 Aligned_cols=179 Identities=7% Similarity=0.052 Sum_probs=105.0
Q ss_pred EEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-EeCCCcE
Q 048181 39 IAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-ADAYSGL 117 (310)
Q Consensus 39 ia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad~~~gi 117 (310)
.++.++|+++++...++.|..++...+..... +.........++++ +++++++ +.....|
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~------------------~~~h~~~v~~~~~~-~~~~~l~s~s~d~~i 163 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREI------------------DQAHVSEITKLKFF-PSGEALISSSQDMQL 163 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTSCEEEEE------------------TTSSSSCEEEEEEC-TTSSEEEEEETTSEE
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCCcceeee------------------cccccCccEEEEEC-CCCCEEEEEeCCCeE
Confidence 35678899888888899999888775432211 01123345689997 5665544 4444448
Q ss_pred EEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeec
Q 048181 118 LVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLR 196 (310)
Q Consensus 118 ~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~ 196 (310)
..+|..+++. ..+ .. .-...+.++++++ |+.+++-.. +|.+..+|..+++......
T Consensus 164 ~iwd~~~~~~~~~~-~~----h~~~v~~~~~~~~-~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 164 KIWSVKDGSNPRTL-IG----HRATVTDIAIIDR-GRNVLSASL-----------------DGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp EEEETTTCCCCEEE-EC----CSSCEEEEEEETT-TTEEEEEET-----------------TSCEEEEETTTTEEEEEEC
T ss_pred EEEeCCCCcCceEE-cC----CCCcEEEEEEcCC-CCEEEEEcC-----------------CCcEEEeECCCCceeEEee
Confidence 8888876543 222 11 1234578999995 766655332 3556666655554333222
Q ss_pred C-------------------------CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeee
Q 048181 197 N-------------------------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKR 250 (310)
Q Consensus 197 ~-------------------------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~ 250 (310)
. ....+.++|+|+|++| ++-...+.|..+++.... ....+ .........+++
T Consensus 221 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~ 298 (420)
T 3vl1_A 221 RKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV-IAGHVSGVITVHNVFSKE-QTIQLPSKFTCSCNSLTV 298 (420)
T ss_dssp BTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE-EEEETTSCEEEEETTTCC-EEEEECCTTSSCEEEEEE
T ss_pred cCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE-EEEcCCCeEEEEECCCCc-eeEEcccccCCCceeEEE
Confidence 1 1334678889999755 555667889989875421 11111 222334667888
Q ss_pred CCCCCCc-EEEEEe
Q 048181 251 NPGLLQT-FWEAAI 263 (310)
Q Consensus 251 d~~~dG~-l~va~~ 263 (310)
++ +|. +.++..
T Consensus 299 ~~--~~~~~l~~g~ 310 (420)
T 3vl1_A 299 DG--NNANYIYAGY 310 (420)
T ss_dssp CS--SCTTEEEEEE
T ss_pred eC--CCCCEEEEEe
Confidence 88 887 444443
No 190
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.16 E-value=0.00081 Score=60.79 Aligned_cols=180 Identities=7% Similarity=-0.006 Sum_probs=105.9
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-e
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-D 112 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d 112 (310)
-.+++|.+++. +++...+|.|.-++.+.+. ...... .......-..+++. ++|+++++ .
T Consensus 85 v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~----------------~~~H~~~V~~v~~s-pdg~~l~sgs 146 (344)
T 4gqb_B 85 VADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFC----------------KYEHDDIVSTVSVL-SSGTQAVSGS 146 (344)
T ss_dssp EEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEE----------------EECCSSCEEEEEEC-TTSSEEEEEE
T ss_pred EEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeecc----------------ccCCCCCEEEEEEC-CCCCEEEEEe
Confidence 45789999876 5677789998888765322 111100 00112234678997 67766654 3
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
....|...|.++++..... .+ +-...+.+++++++..++++-. .+|.|..+|..+++..
T Consensus 147 ~d~~i~iwd~~~~~~~~~~---~~-h~~~V~~~~~~~~~~~~l~s~s-----------------~D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 147 KDICIKVWDLAQQVVLSSY---RA-HAAQVTCVAASPHKDSVFLSCS-----------------EDNRILLWDTRCPKPA 205 (344)
T ss_dssp TTSCEEEEETTTTEEEEEE---CC-CSSCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTSSSCE
T ss_pred CCCeEEEEECCCCcEEEEE---cC-cCCceEEEEecCCCCCceeeec-----------------ccccccccccccccee
Confidence 3444888898877643222 22 1234578888885335666543 2467888887766543
Q ss_pred Eeec---CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCc
Q 048181 193 VLLR---NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQT 257 (310)
Q Consensus 193 ~~~~---~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~ 257 (310)
.... .-...+.++++|++..++++-...+.|..+++...+ -...+..-......+++.+ +|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~fsp--~g~ 270 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-CVLSSAVHSQCVTGLVFSP--HSV 270 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECS--SSS
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-EEEEEcCCCCCEEEEEEcc--CCC
Confidence 3221 123467899999776688887888999999875321 1111122222345677777 763
No 191
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.16 E-value=0.0014 Score=59.21 Aligned_cols=208 Identities=12% Similarity=0.009 Sum_probs=123.3
Q ss_pred CCcceEEEccC----C---CEEEEEeCCCeEEEEECCCce-------EEeeeecCCCCccccCCCccccCCCC--CCcee
Q 048181 34 FGGESIAFEPV----G---GAFYTGVADGRILKYQAPDGF-------TDFAFTTPTRSKAVCDGTTNLDLGPI--CRRTF 97 (310)
Q Consensus 34 ~~Pegia~d~~----G---~l~~~d~~~g~I~r~~~~g~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~P~ 97 (310)
....+++|.++ | .++++...++.|..++...+. ..+. + .... .....
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~v~ 125 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD------------L-----LDSDMKKHSFW 125 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC------------C-----SCTTGGGSCEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec------------c-----cccccCCCcEE
Confidence 34678999998 8 888888888988887754221 1110 0 0000 24566
Q ss_pred eEEEe----cCCCe-EEEEeCCCcEEEEeCCC------Ce-EE-----Eeec--cCCCccccCccceEEeCCCCeEEEEc
Q 048181 98 GLALH----YATRQ-LYIADAYSGLLVVGPNG------RL-AT-----QLAT--GAEGQAFHFLDGLDVDQGTGVVYFTD 158 (310)
Q Consensus 98 Gla~d----~~~g~-LyVad~~~gi~~id~~~------~~-~~-----~~~~--~~~g~~~~~pndvavd~~~G~lyvtd 158 (310)
.+++. +.... |+++.....|..+|... ++ +. .+.. ......-.....++++++ | ++++-
T Consensus 126 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~ 203 (397)
T 1sq9_A 126 ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-G-LIATG 203 (397)
T ss_dssp EEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT-S-EEEEE
T ss_pred EEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC-c-eEEEE
Confidence 88886 44444 55555444466666554 21 11 2211 000112344678999995 7 55553
Q ss_pred CCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecC-------CCCCceeEEccCCCEEEEEecCC---CeEEEEEe
Q 048181 159 ASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRN-------LTGPAGVAISVDSSFLLVSEFTG---NRTLKYWL 228 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~-------l~~pnGIa~~~dg~~Lyv~d~~~---~~I~~~~~ 228 (310)
. .+|.+..+|..+++....... -.....++|+|++++|+++ ... +.|..+++
T Consensus 204 ~-----------------~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 204 F-----------------NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITLYET 265 (397)
T ss_dssp C-----------------TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEEEET
T ss_pred e-----------------CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceEEEEEC
Confidence 3 247788888876665444443 4456899999999866554 444 78888887
Q ss_pred cCCCCCceee-ec-------------CCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEe
Q 048181 229 RGPRANSFDI-IN-------------FQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTIS 290 (310)
Q Consensus 229 ~~~~~g~~~~-~~-------------l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~ 290 (310)
... ..... .. .......+++++ +|.+.++.... +.+..+|. .++.+..+.
T Consensus 266 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 266 EFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND--SGETLCSAGWD--------GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp TTC--CEEEEECBC--------CCBSBSSCEEEEEECS--SSSEEEEEETT--------SEEEEEETTTTEEEEEEE
T ss_pred CCC--cccceeccCcccccccccccccCCcEEEEEECC--CCCEEEEEeCC--------CeEEEEEcCCCceeEEEe
Confidence 532 11111 22 233457799998 99876665543 36777884 688888887
No 192
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.16 E-value=0.0028 Score=57.07 Aligned_cols=208 Identities=13% Similarity=0.054 Sum_probs=116.2
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-eEEEEe
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-QLYIAD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~LyVad 112 (310)
....+++.|+|..+.+...++.+..++..... .... . ....+.........+++. +++ .|+.+.
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~---------~----~~~~~~~h~~~v~~~~~~-~~~~~l~t~s 173 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMA---------A----KKKSVAMHTNYLSACSFT-NSDMQILTAS 173 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSG---------G----GCEEEEECSSCEEEEEEC-SSSSEEEEEE
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccc---------c----cceeeeccCCcEEEEEEe-CCCCEEEEEe
Confidence 45688899999988888888888777653210 0000 0 000000112234577886 455 455555
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCC-CCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG-TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~-~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
....|..+|.++++...... +. -.....+++.+. +|+.+++-. .+|.+..+|..+++.
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~---~h-~~~v~~~~~~~~~~g~~l~sgs-----------------~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFH---GH-GADVLCLDLAPSETGNTFVSGG-----------------CDKKAMVWDMRSGQC 232 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEE---CC-SSCEEEEEECCCSSCCEEEEEE-----------------TTSCEEEEETTTCCE
T ss_pred CCCcEEEEeCCCCeEEEEEc---CC-CCCeEEEEEEeCCCCCEEEEEe-----------------CCCeEEEEECCCCcE
Confidence 55457788887765432211 11 112345666552 255555532 247888888877765
Q ss_pred EEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-e--cCCCCCceeeeCCCCCCcEEEEEecCCC
Q 048181 192 TVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I--NFQAKPHNIKRNPGLLQTFWEAAIITRQ 267 (310)
Q Consensus 192 ~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~--~l~g~Pdgl~~d~~~dG~l~va~~~~~~ 267 (310)
..... .-...+.++|+|+++ ++++-+..+.|+.+++... ..... . ........+++.+ +|.+.++....+
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~s~--~g~~l~~g~~d~- 306 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRAD--REVAIYSKESIIFGASSVDFSL--SGRLLFAGYNDY- 306 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECT--TSSEEEEEETTS-
T ss_pred EEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCC--cEEEEEcCCCcccceeEEEEeC--CCCEEEEEECCC-
Confidence 43333 234568999999998 5566667888888887532 11111 1 1111245688888 888766655432
Q ss_pred CCCCCceeeEEECC-CCcEEEEEe
Q 048181 268 PAGTPVPIGQRISA-FGAVLDTIS 290 (310)
Q Consensus 268 ~~~~~~~~v~~~~~-~G~~~~~~~ 290 (310)
.+..+|. +|+.+..+.
T Consensus 307 -------~i~vwd~~~~~~~~~l~ 323 (354)
T 2pbi_B 307 -------TINVWDVLKGSRVSILF 323 (354)
T ss_dssp -------CEEEEETTTCSEEEEEC
T ss_pred -------cEEEEECCCCceEEEEE
Confidence 4555553 455554443
No 193
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.15 E-value=0.0023 Score=63.07 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=125.0
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-Ee
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-AD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad 112 (310)
....++++.++|+++++...++.|..++...+....... ........++++ ++++.++ +.
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~------------------~h~~~v~~~~~s-~~~~~l~s~s 491 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV------------------GHTKDVLSVAFS-LDNRQIVSAS 491 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------CCSSCEEEEEEC-TTSSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe------------------CCCCCEEEEEEe-CCCCEEEEEe
Confidence 446689999999988999899999999987543221110 112345678887 5565444 44
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC--eEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG--VVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G--~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
....|...|..+.....+.....+ +-...+.++++++ + ..+++-+ .+|.|..+|..+++
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~-~~~~~l~s~s-----------------~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGGEG-HRDWVSCVRFSPN-TLQPTIVSAS-----------------WDKTVKVWNLSNCK 552 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSSTTS-CSSCEEEEEECSC-SSSCEEEEEE-----------------TTSCEEEEETTTCC
T ss_pred CCCEEEEEECCCCcceeeccCCCC-CCCcEEEEEEeCC-CCcceEEEEe-----------------CCCeEEEEECCCCc
Confidence 444577778765443333222222 2234567888884 4 3444432 24677778876665
Q ss_pred EEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCCC
Q 048181 191 VTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQP 268 (310)
Q Consensus 191 ~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~ 268 (310)
...... .-...+.++++|||+ ++++-+..+.|..+++.. +.... .........+++.+ +|.+.++....
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~---~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~~--- 623 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAE---GKKLYSLEANSVIHALCFSP--NRYWLCAATEH--- 623 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTT---TEEEECCBCSSCEEEEEECS--SSSEEEEEETT---
T ss_pred EEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC---CceEEEecCCCcEEEEEEcC--CCcEEEEEcCC---
Confidence 544333 334568999999998 556666788888888753 22211 22223466789998 88877766543
Q ss_pred CCCCceeeEEECC-CCcEEEEEe
Q 048181 269 AGTPVPIGQRISA-FGAVLDTIS 290 (310)
Q Consensus 269 ~~~~~~~v~~~~~-~G~~~~~~~ 290 (310)
.+..+|- .++++..+.
T Consensus 624 ------~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 624 ------GIKIWDLESKSIVEDLK 640 (694)
T ss_dssp ------EEEEEETTTTEEEEEEC
T ss_pred ------CEEEEECCCCCChhhhc
Confidence 4666774 456666554
No 194
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.15 E-value=0.0024 Score=63.54 Aligned_cols=155 Identities=11% Similarity=0.007 Sum_probs=97.7
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEe
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIAD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad 112 (310)
....+++|+|+|.++.+...+|.|..++...+...... .........++++ ++++ |.++.
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~------------------~~~~~~v~~~~~s-~~~~~l~~~~ 74 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI------------------QVTETPVRAGKFI-ARKNWIIVGS 74 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE------------------ECCSSCEEEEEEE-GGGTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE------------------ecCCCcEEEEEEe-CCCCEEEEEe
Confidence 35789999999998888888999999997644321110 0122345689998 4555 44454
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC-eE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS-QV 191 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g-~~ 191 (310)
....|..++.++++....... .-.....++++++ |...++-. .+|.+..+|..++ ..
T Consensus 75 ~dg~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~-~~~l~~~~-----------------~dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPT-KPYVLSGS-----------------DDLTVKLWNWENNWAL 132 (814)
T ss_dssp TTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSS-SSEEEEEE-----------------TTSEEEEEEGGGTSEE
T ss_pred CCCeEEEEECCCCcEEEEEec----CCCCEEEEEEeCC-CCEEEEEc-----------------CCCEEEEEECCCCceE
Confidence 444588888877654322221 1234578999995 76544422 2366777776544 33
Q ss_pred EE-eecCCCCCceeEEcc-CCCEEEEEecCCCeEEEEEecC
Q 048181 192 TV-LLRNLTGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 192 ~~-~~~~l~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.. +...-.....++|+| +++ ++++-+..+.|+.+++..
T Consensus 133 ~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 133 EQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp EEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTC
T ss_pred EEEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 22 223334568999999 665 566667788999998764
No 195
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.13 E-value=0.001 Score=60.04 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=98.5
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI- 110 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV- 110 (310)
....+++|.+ +++++++...++.|..++..++.. .+.. ..........+++. +++++++
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----------------~~~~~~~v~~~~~~-~~~~~l~~ 180 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK-----------------TDSWDYWYCCVDVS-VSRQMLAT 180 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC-----------------CCCSSCCEEEEEEE-TTTTEEEE
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec-----------------cCCCCCCeEEEEEC-CCCCEEEE
Confidence 4566899998 678888888899999998875432 2210 00112345688997 5555544
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEcCCC-
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS- 188 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~- 188 (310)
+.....|..+|..+.....+.. .....+.++++++ +. ++++-.. +|.|..+|..+
T Consensus 181 ~~~d~~i~i~d~~~~~~~~~~~-----h~~~v~~~~~~~~-~~~~l~s~~~-----------------d~~i~iwd~~~~ 237 (383)
T 3ei3_B 181 GDSTGRLLLLGLDGHEIFKEKL-----HKAKVTHAEFNPR-CDWLMATSSV-----------------DATVKLWDLRNI 237 (383)
T ss_dssp EETTSEEEEEETTSCEEEEEEC-----SSSCEEEEEECSS-CTTEEEEEET-----------------TSEEEEEEGGGC
T ss_pred ECCCCCEEEEECCCCEEEEecc-----CCCcEEEEEECCC-CCCEEEEEeC-----------------CCEEEEEeCCCC
Confidence 4444458888886544444321 1234678999995 76 6665432 36677777654
Q ss_pred ---CeEEEeecCCCCCceeEEcc-CCCEEEEEecCCCeEEEEEecC
Q 048181 189 ---SQVTVLLRNLTGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 189 ---g~~~~~~~~l~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+........-.....++|+| +|+.| ++-...+.|..+++..
T Consensus 238 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 238 KDKNSYIAEMPHEKPVNAAYFNPTDSTKL-LTTDQRNEIRVYSSYD 282 (383)
T ss_dssp CSTTCEEEEEECSSCEEEEEECTTTSCEE-EEEESSSEEEEEETTB
T ss_pred CcccceEEEecCCCceEEEEEcCCCCCEE-EEEcCCCcEEEEECCC
Confidence 33333334445678999999 99855 4556678999998864
No 196
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.12 E-value=0.0016 Score=64.77 Aligned_cols=186 Identities=11% Similarity=0.015 Sum_probs=111.6
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEe
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIAD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad 112 (310)
....+++|.++|.++++...++.|..++...+...... .........+++. +++. |+++.
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~------------------~~~~~~v~~~~~s-~~~~~l~~~~ 116 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF------------------EAHPDYIRSIAVH-PTKPYVLSGS 116 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE------------------ECCSSCEEEEEEC-SSSSEEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE------------------ecCCCCEEEEEEe-CCCCEEEEEc
Confidence 35678999999998888888999999997643321111 0122346688997 5664 55455
Q ss_pred CCCcEEEEeCCCC-eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 113 AYSGLLVVGPNGR-LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 113 ~~~gi~~id~~~~-~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
....|..++.+++ ........ .-.....++++|++++.+++-. .+|.|..+|..+++.
T Consensus 117 ~dg~i~vw~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~-----------------~dg~v~vwd~~~~~~ 175 (814)
T 3mkq_A 117 DDLTVKLWNWENNWALEQTFEG----HEHFVMCVAFNPKDPSTFASGC-----------------LDRTVKVWSLGQSTP 175 (814)
T ss_dssp TTSEEEEEEGGGTSEEEEEEEC----CSSCEEEEEEETTEEEEEEEEE-----------------TTSEEEEEETTCSSC
T ss_pred CCCEEEEEECCCCceEEEEEcC----CCCcEEEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCcc
Confidence 4444777777654 32222211 1123567889883366665533 246788888654433
Q ss_pred EE-eecC-CCCCceeEEcc--CCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 192 TV-LLRN-LTGPAGVAISV--DSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 192 ~~-~~~~-l~~pnGIa~~~--dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.. +... ....+.++++| +++. +++-...+.|..+++.... .... ..-.+....+++.+ +|.+.++...
T Consensus 176 ~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~ 248 (814)
T 3mkq_A 176 NFTLTTGQERGVNYVDYYPLPDKPY-MITASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHP--TLPIIISGSE 248 (814)
T ss_dssp SEEEECCCTTCCCEEEECCSTTCCE-EEEECTTSEEEEEETTTTE--EEEEEECCSSCEEEEEECS--SSSEEEEEET
T ss_pred eeEEecCCCCCEEEEEEEECCCCCE-EEEEeCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcC--CCCEEEEEeC
Confidence 22 2222 24568999999 8874 5555677889988875321 1111 22223456788888 8876655544
No 197
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.12 E-value=0.00012 Score=66.05 Aligned_cols=197 Identities=9% Similarity=-0.051 Sum_probs=104.8
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
.+.-....+++|.++|+++++...++.|..++...+. .... ...........+++. ++++
T Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-----------------~~~~~~~~v~~~~~~-~~~~ 113 (377)
T 3dwl_C 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL-----------------VLLRLNRAATFVRWS-PNED 113 (377)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE-----------------ECCCCSSCEEEEECC-TTSS
T ss_pred ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee-----------------EecccCCceEEEEEC-CCCC
Confidence 3333456789999999988888888988888766432 1110 011123345678886 4555
Q ss_pred -EEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 108 -LYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 108 -LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
|+.+.....|..+|.++++...+.....+..-...+.++++++ |+++++-.. +|.+..+|.
T Consensus 114 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~-----------------d~~i~iwd~ 175 (377)
T 3dwl_C 114 KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN-NVLLAAGCA-----------------DRKAYVLSA 175 (377)
T ss_dssp CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT-SSEEEEEES-----------------SSCEEEEEE
T ss_pred EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC-CCEEEEEeC-----------------CCEEEEEEE
Confidence 4445444447777776654100111111112245678999994 776665432 244555553
Q ss_pred CC------------------CeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCc--ee-eecCCCCC
Q 048181 187 RS------------------SQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANS--FD-IINFQAKP 245 (310)
Q Consensus 187 ~~------------------g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~--~~-~~~l~g~P 245 (310)
.+ ++.......-...+.++|+|||++| ++-...+.|..+++....... .. +..-....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL-AYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL 254 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCE-EEEETTTEEC-CEECSTTSCEEECCCEECSSSCE
T ss_pred EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEE-EEEeCCCcEEEEECCCCCCcceeeEeecCCCCce
Confidence 21 1111111222345789999999854 455677888888886532100 11 12222335
Q ss_pred ceeeeCCCCCCcEEEEEecC
Q 048181 246 HNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 246 dgl~~d~~~dG~l~va~~~~ 265 (310)
..+++.+ +|.+.++....
T Consensus 255 ~~~~~s~--~~~~l~~~~~~ 272 (377)
T 3dwl_C 255 RSLLWAN--ESAIVAAGYNY 272 (377)
T ss_dssp EEEEEEE--TTEEEEEESSS
T ss_pred EEEEEcC--CCCEEEEEcCC
Confidence 7789998 99877776543
No 198
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.12 E-value=0.0039 Score=55.40 Aligned_cols=191 Identities=8% Similarity=0.046 Sum_probs=106.6
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE-
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI- 110 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV- 110 (310)
....+++|.++|.++++...++.|..++.... ...... +.........+++.+. ++++++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT-----------------LTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE-----------------ECCCSSCEEEEEECCGGGCSEEEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeE-----------------ecCCCCcEEEEEeCCCCCCCEEEE
Confidence 34668999999998888888898888876522 211110 0112234467888522 155544
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
+.....|..+|..+++...+... .+ .-.....++++++. +.++++-. .+|.+..+|..++
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~l~~~~-----------------~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAVH-AV-HSASVNSVQWAPHEYGPLLLVAS-----------------SDGKVSVVEFKEN 135 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEECCTT
T ss_pred eccCCEEEEEEcCCCceeEeeee-cC-CCcceEEEEeCCCCCCCEEEEec-----------------CCCcEEEEecCCC
Confidence 44444477777777653222211 11 12346788898831 55554432 2366777776544
Q ss_pred e---EEEeecCCCCCceeEEcc-------------CCCEEEEEecCCCeEEEEEecCCCCCceee-ecC---CCCCceee
Q 048181 190 Q---VTVLLRNLTGPAGVAISV-------------DSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INF---QAKPHNIK 249 (310)
Q Consensus 190 ~---~~~~~~~l~~pnGIa~~~-------------dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l---~g~Pdgl~ 249 (310)
. ...+...-...+.++++| +++ ++++-+..+.|+.+++.... ..... ..+ .+....++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCC-cceeeEEEEecccCcEeEEE
Confidence 1 222223333457899999 677 45555667888888886432 11111 111 23355677
Q ss_pred eCCCCC---CcEEEEEec
Q 048181 250 RNPGLL---QTFWEAAII 264 (310)
Q Consensus 250 ~d~~~d---G~l~va~~~ 264 (310)
+.+ + |++.++...
T Consensus 214 ~sp--~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 214 WSP--TVLLRSYLASVSQ 229 (379)
T ss_dssp ECC--CCSSSEEEEEEET
T ss_pred ECC--CCCCCCeEEEEeC
Confidence 777 7 665555443
No 199
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.11 E-value=0.00037 Score=64.64 Aligned_cols=205 Identities=12% Similarity=0.035 Sum_probs=124.9
Q ss_pred CCcceEEEccCCC-EEEEEeCCCeEEEEECCCce---EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 34 FGGESIAFEPVGG-AFYTGVADGRILKYQAPDGF---TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
....+++|.+++. ++++...+|.|..++..... ..+.. ...+.........+++++.++.++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--------------~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDA--------------KNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEEC--------------SEEECCCSSCEEEEEECSSCTTEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecc--------------ceeecCCCCCEeeeEEeCCCCCEE
Confidence 3567899999987 88888889999999876411 11000 000112233467899974467777
Q ss_pred EEeCC-CcEEEEeCCCCe----EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 110 IADAY-SGLLVVGPNGRL----ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 110 Vad~~-~gi~~id~~~~~----~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++... ..|..+|..++. ...+ .. .-..++.+++++++..++++-.. +|.|..+
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~-~~----~~~~v~~i~~~p~~~~~l~tg~~-----------------dg~v~vw 305 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTV-DA----HTAEVNCLSFNPYSEFILATGSA-----------------DKTVALW 305 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEE-EC----CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEE
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEe-ec----CCCCeEEEEeCCCCCCEEEEEeC-----------------CCeEEEE
Confidence 66544 347788877542 1222 11 12346889999953346666432 4677778
Q ss_pred cCCCC--eEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCC---------ceee----ecCCCCCceee
Q 048181 185 NPRSS--QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRAN---------SFDI----INFQAKPHNIK 249 (310)
Q Consensus 185 d~~~g--~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g---------~~~~----~~l~g~Pdgl~ 249 (310)
|..+. .+..+...-.....|+|+|+++.++++-...++|..+++...... ..++ .+-...+..++
T Consensus 306 d~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 306 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp ETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred eCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 76542 233333334456899999999888888888899999998742110 0111 11223578899
Q ss_pred eCCCCCCc-EEEEEecCCCCCCCCceeeEEECCCCc
Q 048181 250 RNPGLLQT-FWEAAIITRQPAGTPVPIGQRISAFGA 284 (310)
Q Consensus 250 ~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~~G~ 284 (310)
+.+ +|. ++++....+ .+..++.+..
T Consensus 386 ~~p--~~~~~l~s~s~dg--------~i~iw~~~~~ 411 (430)
T 2xyi_A 386 WNP--NEPWIICSVSEDN--------IMQVWQMAEN 411 (430)
T ss_dssp ECS--SSTTEEEEEETTS--------EEEEEEECHH
T ss_pred ECC--CCCCEEEEEECCC--------CEEEeEcccc
Confidence 999 887 666655432 5666665433
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.11 E-value=0.0011 Score=63.32 Aligned_cols=206 Identities=10% Similarity=0.014 Sum_probs=121.4
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCc----eEEeeeecCCCCccccCCCccccCCCCCCc-eeeEEEecC--CC
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDG----FTDFAFTTPTRSKAVCDGTTNLDLGPICRR-TFGLALHYA--TR 106 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-P~Gla~d~~--~g 106 (310)
..+..++|+++|+++++.. ++.|..++.+.+ ..... +...... ...+++. + ++
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~------------------~~~h~~~~v~~~~~s-p~~~~ 78 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQ------------------FTGHGSSVVTTVKFS-PIKGS 78 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEE------------------ECTTTTSCEEEEEEC-SSTTC
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceE------------------EecCCCceEEEEEEC-cCCCC
Confidence 4577899999999766665 778888887643 11111 0112234 6789997 5 66
Q ss_pred eEEE-EeCCCcEEEEeCCCC------eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCc
Q 048181 107 QLYI-ADAYSGLLVVGPNGR------LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTG 179 (310)
Q Consensus 107 ~LyV-ad~~~gi~~id~~~~------~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G 179 (310)
++++ +.....|..++..++ +...+ ....+ .-...+.++++++ |+..++-... ....+
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~s~~-~~~l~~~~~~-------------~~~~~ 142 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVK-SEFQV-LAGPISDISWDFE-GRRLCVVGEG-------------RDNFG 142 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEE-EEEEC-CSSCEEEEEECTT-SSEEEEEECC-------------SSCSE
T ss_pred CEEEEecCCCEEEEEeCCCCccccccccccc-chhhc-ccccEEEEEEeCC-CCEEEEeccC-------------CCCcc
Confidence 6555 444434666666433 11111 11111 1234678999995 7655543221 11236
Q ss_pred eEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCC---CCceeeeCCCC
Q 048181 180 RLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQA---KPHNIKRNPGL 254 (310)
Q Consensus 180 ~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g---~Pdgl~~d~~~ 254 (310)
.++.+|.. .....+...-...+.++|+|+++.++++-...+.|..+++.. +.... ..-.. ....+++.+
T Consensus 143 ~v~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~-- 216 (615)
T 1pgu_A 143 VFISWDSG-NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTHHKQGSFVRDVEFSP-- 216 (615)
T ss_dssp EEEETTTC-CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSSSCTTCCEEEEEECS--
T ss_pred EEEEEECC-CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeecccCCCCceEEEEEECC--
Confidence 77777732 333334334445689999999986777777889999888643 22211 11222 356789998
Q ss_pred C-CcEEEEEecCCCCCCCCceeeEEEC-CCCcEEEEE
Q 048181 255 L-QTFWEAAIITRQPAGTPVPIGQRIS-AFGAVLDTI 289 (310)
Q Consensus 255 d-G~l~va~~~~~~~~~~~~~~v~~~~-~~G~~~~~~ 289 (310)
+ |++.++.... +.+..+| .+|+.+..+
T Consensus 217 ~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 217 DSGEFVITVGSD--------RKISCFDGKSGEFLKYI 245 (615)
T ss_dssp TTCCEEEEEETT--------CCEEEEETTTCCEEEEC
T ss_pred CCCCEEEEEeCC--------CeEEEEECCCCCEeEEe
Confidence 8 8766655443 2577777 457777766
No 201
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.11 E-value=0.0005 Score=60.69 Aligned_cols=212 Identities=11% Similarity=0.031 Sum_probs=123.0
Q ss_pred CCcceEEEccCCC-EEEEEeCCCeEEEEEC-CCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 34 FGGESIAFEPVGG-AFYTGVADGRILKYQA-PDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 34 ~~Pegia~d~~G~-l~~~d~~~g~I~r~~~-~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
....+++|.++++ ++++...++.|..++. .++.. .+. + .........+++.+ ...|+.
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~------------~------~~~~~~v~~l~~~~-~~~l~s 117 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT------------N------NEANLGICRICKYG-DDKLIA 117 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB------------S------CCCCSCEEEEEEET-TTEEEE
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc------------c------cCCCCceEEEEeCC-CCEEEE
Confidence 4577899999999 8889888999999987 64432 211 0 00223456889974 444554
Q ss_pred EeCCCcEEEEeCCC---------CeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 111 ADAYSGLLVVGPNG---------RLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 111 ad~~~gi~~id~~~---------~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
+.....|..+|..+ ++. ..... .-..+..++++++ + ++++.. +|.|
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~--~~~~v~~~~~~~~-~-l~~~~~------------------d~~i 172 (342)
T 1yfq_A 118 ASWDGLIEVIDPRNYGDGVIAVKNLN---SNNTK--VKNKIFTMDTNSS-R-LIVGMN------------------NSQV 172 (342)
T ss_dssp EETTSEEEEECHHHHTTBCEEEEESC---SSSSS--SCCCEEEEEECSS-E-EEEEES------------------TTEE
T ss_pred EcCCCeEEEEcccccccccccccCCe---eeEEe--eCCceEEEEecCC-c-EEEEeC------------------CCeE
Confidence 55444477777553 221 11111 1234567888873 5 555432 3667
Q ss_pred EEEcCCC-Ce--EEEee-cCCCCCceeEEcc-CCCEEEEEecCCCeEEEEEecCC--C---CCceeeecC---------C
Q 048181 182 LSYNPRS-SQ--VTVLL-RNLTGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRGP--R---ANSFDIINF---------Q 242 (310)
Q Consensus 182 ~~~d~~~-g~--~~~~~-~~l~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~~--~---~g~~~~~~l---------~ 242 (310)
..+|..+ +. ..... ..-.....++++| +++.+ ++-...+.|..++++.. . .....+... .
T Consensus 173 ~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA 251 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE-EEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSC
T ss_pred EEEECCccccccceeeecCCCCceeEEEECCCCCCEE-EEEecCCcEEEEEEcCCCcccccccceeeecccccccccccc
Confidence 7777765 32 22222 2223568999999 99854 45556788888777642 0 111111111 1
Q ss_pred CCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC-CCccccceeEEE
Q 048181 243 AKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE-AQYSTTPISEVQ 304 (310)
Q Consensus 243 g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p-~~~~~~~~t~~~ 304 (310)
+....+++++ +|.+.++.... +.+..+|. +|+.+..+... .+ .|+.+.
T Consensus 252 ~~i~~~~~s~--~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~h~~----~v~~~~ 301 (342)
T 1yfq_A 252 YPVNSIEFSP--RHKFLYTAGSD--------GIISCWNLQTRKKIKNFAKFNED----SVVKIA 301 (342)
T ss_dssp CCEEEEEECT--TTCCEEEEETT--------SCEEEEETTTTEEEEECCCCSSS----EEEEEE
T ss_pred eeEEEEEEcC--CCCEEEEecCC--------ceEEEEcCccHhHhhhhhcccCC----CceEec
Confidence 1456788998 88765554443 25777775 47776665543 32 455555
No 202
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.08 E-value=0.0011 Score=59.99 Aligned_cols=97 Identities=11% Similarity=0.063 Sum_probs=61.8
Q ss_pred CceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ec-CC-CCCceeeeCCCC
Q 048181 178 TGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-IN-FQ-AKPHNIKRNPGL 254 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~-l~-g~Pdgl~~d~~~ 254 (310)
+|.++.+|+.+|+..-. .......+++.+ ++.||++.. .+.|+.++... |+..- .. +. .......+.
T Consensus 248 ~g~l~~~d~~tG~~~w~-~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~t---G~~~w~~~~~~~~~~~~~~~~--- 317 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWK-RELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDG---GVTLWTQSDLLHRLLTSPVLY--- 317 (376)
T ss_dssp TSCEEEEETTTCCEEEE-ECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTT---CCEEEEECTTTTSCCCCCEEE---
T ss_pred CcEEEEEECCCCcEEee-ccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCC---CcEEEeecccCCCcccCCEEE---
Confidence 46799999988875422 233345566665 456888764 66799998753 33221 11 21 122334454
Q ss_pred CCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecCC
Q 048181 255 LQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFEA 293 (310)
Q Consensus 255 dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~ 293 (310)
+|.||++.... .+.++|+ +|+++..+..+.
T Consensus 318 ~~~l~v~~~~g---------~l~~~d~~tG~~~~~~~~~~ 348 (376)
T 3q7m_A 318 NGNLVVGDSEG---------YLHWINVEDGRFVAQQKVDS 348 (376)
T ss_dssp TTEEEEECTTS---------EEEEEETTTCCEEEEEECCT
T ss_pred CCEEEEEeCCC---------eEEEEECCCCcEEEEEecCC
Confidence 57999998754 6999995 799999988853
No 203
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.03 E-value=0.00015 Score=65.25 Aligned_cols=156 Identities=7% Similarity=-0.070 Sum_probs=86.4
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-Ee
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-AD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad 112 (310)
...+++|.++|+++++...++.|..++..++. .... .+.........+++. +++++++ +.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-----------------~~~~h~~~v~~~~~s-~~~~~l~s~s 74 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-----------------TFSDHDKIVTCVDWA-PKSNRIVTCS 74 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-----------------CBCCCSSCEEEEEEC-TTTCCEEEEE
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-----------------EEecCCceEEEEEEe-CCCCEEEEEe
Confidence 35688999999988777778888877765431 2111 011122345688997 5565444 44
Q ss_pred CCCcEEEEeCCCCe-EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe-
Q 048181 113 AYSGLLVVGPNGRL-ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ- 190 (310)
Q Consensus 113 ~~~gi~~id~~~~~-~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~- 190 (310)
....|..+|..+++ ...... ..+ .-...+.++++++ |+.+++-.. +|.+..+|..+++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~-~~~l~~~~~-----------------d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLV-LLR-LNRAATFVRWSPN-EDKFAVGSG-----------------ARVISVCYFEQEND 134 (377)
T ss_dssp TTSSEEEC------CCCCEEE-CCC-CSSCEEEEECCTT-SSCCEEEES-----------------SSCEEECCC-----
T ss_pred CCCeEEEEEcCCCCceeeeeE-ecc-cCCceEEEEECCC-CCEEEEEec-----------------CCeEEEEEECCccc
Confidence 44457777776654 111111 111 1234578889984 665554322 3567777765543
Q ss_pred ---EEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 191 ---VTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 191 ---~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
...+.. .-...+.++|+|+++.| ++-...+.|..+++.
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLL-AAGCADRKAYVLSAY 176 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEE-EEEESSSCEEEEEEC
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEE-EEEeCCCEEEEEEEE
Confidence 233333 33456899999999854 555567788888874
No 204
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.01 E-value=0.00046 Score=62.78 Aligned_cols=158 Identities=15% Similarity=0.048 Sum_probs=93.4
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-eC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-DA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d~ 113 (310)
...+++|.|+|.++.+.. ++.+.++....+....... ..........+++. ++|+.+++ ..
T Consensus 178 ~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~----------------~~~~~~~v~~v~fs-pdg~~l~~~s~ 239 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKT----------------DFDKNWSLSKINFI-ADDTVLIAASL 239 (365)
T ss_dssp CCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEEC----------------CCCTTEEEEEEEEE-ETTEEEEEEEE
T ss_pred ceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeee----------------cCCCCCCEEEEEEc-CCCCEEEEEec
Confidence 367899999999665554 5667777655332211100 00112234578887 56666554 22
Q ss_pred C--Cc--EEEEeCCCCeEEEee-ccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 114 Y--SG--LLVVGPNGRLATQLA-TGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 114 ~--~g--i~~id~~~~~~~~~~-~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
. .+ ++.++.......... ....+ .....+.++++| +|++.++-+. +|.|..+|..+
T Consensus 240 d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Sp-dg~~lasgs~-----------------D~~V~iwd~~~ 300 (365)
T 4h5i_A 240 KKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDM-KGELAVLASN-----------------DNSIALVKLKD 300 (365)
T ss_dssp SSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECT-TSCEEEEEET-----------------TSCEEEEETTT
T ss_pred CCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECC-CCCceEEEcC-----------------CCEEEEEECCC
Confidence 2 22 455565444322211 11111 223457899999 4887776432 47788888877
Q ss_pred CeEEE-eecC-CCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 189 SQVTV-LLRN-LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 189 g~~~~-~~~~-l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
++... +..+ -..-+.++|+|||+ ++++-+..+.|+.+++..
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCT
T ss_pred CcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 76533 3332 33458999999998 567778889998888753
No 205
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.99 E-value=0.0051 Score=64.52 Aligned_cols=195 Identities=10% Similarity=0.014 Sum_probs=117.6
Q ss_pred EeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC
Q 048181 27 ILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 27 ~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g 106 (310)
+.+.+......+++|.++|.++++...++.|..++...+...... .........++++ ++|
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~------------------~~h~~~v~~~~~s-~~~ 669 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDI------------------KAHEDEVLCCAFS-SDD 669 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE------------------CCCSSCEEEEEEC-TTS
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEe------------------ccCCCCEEEEEEe-cCC
Confidence 344444456778999999998888888999999997754322111 1123345689997 566
Q ss_pred eEEEE-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 107 QLYIA-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 107 ~LyVa-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
+++++ .....|..+|..+++....... +-...+.++++++. +.+.++-. .+|.+..+
T Consensus 670 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~sg~-----------------~d~~v~vw 728 (1249)
T 3sfz_A 670 SYIATCSADKKVKIWDSATGKLVHTYDE----HSEQVNCCHFTNKSNHLLLATGS-----------------NDFFLKLW 728 (1249)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSCCEEEEEE-----------------TTSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEcC----CCCcEEEEEEecCCCceEEEEEe-----------------CCCeEEEE
Confidence 65554 4444488888887654322221 12235677887731 33444432 34778888
Q ss_pred cCCCCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCC-ceeee-----------cCCCCCceeeeC
Q 048181 185 NPRSSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRAN-SFDII-----------NFQAKPHNIKRN 251 (310)
Q Consensus 185 d~~~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g-~~~~~-----------~l~g~Pdgl~~d 251 (310)
|..+++..... ..-...+.++|+|+++ ++++-+..+.|..+++...... ..... ........+++.
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred ECCCcchhheecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 87776644333 3334568999999998 4556667788888887642100 00000 011235567888
Q ss_pred CCCCCcEEEEEec
Q 048181 252 PGLLQTFWEAAII 264 (310)
Q Consensus 252 ~~~dG~l~va~~~ 264 (310)
+ +|...++...
T Consensus 808 ~--dg~~l~~~~~ 818 (1249)
T 3sfz_A 808 A--DGDKIIVAAK 818 (1249)
T ss_dssp T--TSSEEEEEET
T ss_pred C--CCCEEEEEcC
Confidence 8 8877666543
No 206
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.98 E-value=0.0064 Score=54.69 Aligned_cols=183 Identities=11% Similarity=0.127 Sum_probs=110.2
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE-
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI- 110 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV- 110 (310)
...+++|.+++..+++...++.|..++...+.. .+. ........+++.+. +|++++
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--------------------~h~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--------------------GHGADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECCCSSCCEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc--------------------CCCCCeEEEEEEeCCCCCEEEE
Confidence 346788999998888888999999999774322 221 11123345666422 455554
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
+.....|..+|..+++...... + +-...+.++++|+ |..+++-.. +|.+..+|..+++
T Consensus 216 gs~Dg~v~~wd~~~~~~~~~~~---~-h~~~v~~v~~~p~-~~~l~s~s~-----------------D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQCVQAFE---T-HESDVNSVRYYPS-GDAFASGSD-----------------DATCRLYDLRADR 273 (354)
T ss_dssp EETTSCEEEEETTTCCEEEEEC---C-CSSCEEEEEECTT-SSEEEEEET-----------------TSCEEEEETTTTE
T ss_pred EeCCCeEEEEECCCCcEEEEec---C-CCCCeEEEEEeCC-CCEEEEEeC-----------------CCeEEEEECCCCc
Confidence 4444458888987765432221 1 1234678999994 777766432 4667777766554
Q ss_pred EEEeecC---CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 191 VTVLLRN---LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 191 ~~~~~~~---l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
....... ......++|+|+|++| ++-...+.|..+++... ..... .+-.+....+++.+ +|.+.++...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~g~~l-~~g~~d~~i~vwd~~~~--~~~~~l~~h~~~v~~l~~sp--dg~~l~sgs~ 346 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLSGRLL-FAGYNDYTINVWDVLKG--SRVSILFGHENRVSTLRVSP--DGTAFCSGSW 346 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEE-EEEETTSCEEEEETTTC--SEEEEECCCSSCEEEEEECT--TSSCEEEEET
T ss_pred EEEEEcCCCcccceeEEEEeCCCCEE-EEEECCCcEEEEECCCC--ceEEEEECCCCcEEEEEECC--CCCEEEEEcC
Confidence 3322221 1245789999999854 55556788888887431 11111 22233456788888 8876665443
No 207
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.98 E-value=0.0014 Score=65.04 Aligned_cols=214 Identities=13% Similarity=0.066 Sum_probs=117.3
Q ss_pred ceEEEccCCCEE-EEEeCCC----eEEEEECCCceEE-eeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 37 ESIAFEPVGGAF-YTGVADG----RILKYQAPDGFTD-FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 37 egia~d~~G~l~-~~d~~~g----~I~r~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
.+++|.|||+.+ |+....| .|+.++.+++... .... .....++++.+++..||+
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--------------------~~~~~~~~wspDg~~l~~ 187 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--------------------RVKFSCMAWTHDGKGMFY 187 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--------------------EECSCCEEECTTSSEEEE
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--------------------CcccceEEEEeCCCEEEE
Confidence 478999999744 4443333 7888888765422 1100 001236888633345666
Q ss_pred EeCCC----------------cEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEee
Q 048181 111 ADAYS----------------GLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 111 ad~~~----------------gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~ 172 (310)
+.... .|++++..+++. ..+...... -.+..++++++++..|+++-...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~--~~~~~~~~~SpDg~~l~~~~~~~----------- 254 (710)
T 2xdw_A 188 NAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE--PKWMGGAELSDDGRYVLLSIREG----------- 254 (710)
T ss_dssp EECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC--TTCEEEEEECTTSCEEEEEEECS-----------
T ss_pred EEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC--CeEEEEEEEcCCCCEEEEEEEcc-----------
Confidence 54322 288888876542 222222111 12345788999633455543211
Q ss_pred eecCCCceEEEEcCCC------C--eEEEeecCCCCCceeEEccCCCEEEEEecC---CCeEEEEEecCCCCCc-eee-e
Q 048181 173 ITNDSTGRLLSYNPRS------S--QVTVLLRNLTGPAGVAISVDSSFLLVSEFT---GNRTLKYWLRGPRANS-FDI-I 239 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~~------g--~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~---~~~I~~~~~~~~~~g~-~~~-~ 239 (310)
...+..|+.+|.++ + ..+.+...... .--.+++||+.||+.... +.+|+++++++..... ..+ .
T Consensus 255 --~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 255 --CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp --SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred --CCCccEEEEEECcccccccCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 01135688888754 4 34555443322 233588999988887543 4589999987532111 122 2
Q ss_pred cCC-CCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecCCC
Q 048181 240 NFQ-AKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFEAQ 294 (310)
Q Consensus 240 ~l~-g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~~ 294 (310)
... ....++++.. ++.++++..... ...+.+++. +|+.+..+..|.+
T Consensus 332 ~~~~~~~~~~~~~~--~~~lv~~~~~~g------~~~l~~~~~~~g~~~~~l~~~~~ 380 (710)
T 2xdw_A 332 EHEKDVLEWVACVR--SNFLVLCYLHDV------KNTLQLHDLATGALLKIFPLEVG 380 (710)
T ss_dssp CCSSCEEEEEEEET--TTEEEEEEEETT------EEEEEEEETTTCCEEEEECCCSS
T ss_pred CCCCCeEEEEEEEc--CCEEEEEEEECC------EEEEEEEECCCCCEEEecCCCCc
Confidence 211 1244677776 677766654432 246777886 7887777777644
No 208
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.0021 Score=59.69 Aligned_cols=156 Identities=9% Similarity=0.057 Sum_probs=94.7
Q ss_pred CcceEEEccCCCEE-EEEeCCCeEEEEECC--Cc-e-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-eE
Q 048181 35 GGESIAFEPVGGAF-YTGVADGRILKYQAP--DG-F-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-QL 108 (310)
Q Consensus 35 ~Pegia~d~~G~l~-~~d~~~g~I~r~~~~--g~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~L 108 (310)
...+++|.++|..+ ++...++.|..++.. .+ . ..+.. ......+..++++ +++ .|
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~~~~~v~~~~~s-p~~~~l 164 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR------------------FCFSKRPNAISIA-EDDTTV 164 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE------------------EECSSCEEEEEEC-TTSSEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec------------------ccCCCCceEEEEc-CCCCEE
Confidence 46789999999875 667778888877754 32 2 22210 0112356789997 455 45
Q ss_pred EEEeCCCcEEEEeCCCCeEEE-eeccCCCccccCccceEEeCCC---CeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 109 YIADAYSGLLVVGPNGRLATQ-LATGAEGQAFHFLDGLDVDQGT---GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 109 yVad~~~gi~~id~~~~~~~~-~~~~~~g~~~~~pndvavd~~~---G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++++....++.++..++.... ......+ .....+.++++| + ++++++-.. ++.|..+
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp-~~~~~~~l~s~~~-----------------d~~i~vw 225 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIK-DSDGHQFIITSDR-----------------DEHIKIS 225 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEE-CTTSCEEEEEEET-----------------TSCEEEE
T ss_pred EEEeCCCcEEEEecCCcccccccceeeec-ccCceEEEEEcC-CCCCCcEEEEEcC-----------------CCcEEEE
Confidence 556555458888876544221 0011111 223567899999 5 666655332 3567777
Q ss_pred cCCCCeEE-Eee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 185 NPRSSQVT-VLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 185 d~~~g~~~-~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
|..+++.. .+. ..-...+.++|+ |+++|+ +-...+.|..+++..
T Consensus 226 d~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~-s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 226 HYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL-SAGGDDKIFAWDWKT 271 (450)
T ss_dssp EESCTTCEEEECCCCSSCEEEEEEC-STTEEE-EEESSSEEEEEETTT
T ss_pred ECCCCceeeeeecCCCCceEEEEEC-CCCEEE-EEeCCCeEEEEECCC
Confidence 76555432 222 233456899999 998554 555788899888764
No 209
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=0.00029 Score=63.62 Aligned_cols=192 Identities=11% Similarity=-0.048 Sum_probs=99.1
Q ss_pred cceEEEccCCCE-EEEEeC--CCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCcee-eEEEecCCCeEEEE
Q 048181 36 GESIAFEPVGGA-FYTGVA--DGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTF-GLALHYATRQLYIA 111 (310)
Q Consensus 36 Pegia~d~~G~l-~~~d~~--~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~-Gla~d~~~g~LyVa 111 (310)
+.+++|.|+|+. +|+... +..|+.++.+++...... ....... ++++.+....|+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-------------------~~~~~~~~~~~~spdg~~l~~~ 98 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-------------------EGKGDNTFGGFISTDERAFFYV 98 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-------------------CSSCBCTTTCEECTTSSEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-------------------cCCCCccccceECCCCCEEEEE
Confidence 567899999974 455433 347888887765432110 0011111 35675333356555
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCC---------CccCcc-ceeEeee---ecCCC
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDAS---------GVYDFR-TIVKLNI---TNDST 178 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~---------~~~~~~-~~~~~~~---~~~~~ 178 (310)
.....|+.++.++++.+.+.....+ ..+++..|+++... ..+.+. .+. .+. .....
T Consensus 99 ~~~~~l~~~d~~~~~~~~~~~~~~~----------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~-~~~~~~~~~~~ 167 (396)
T 3c5m_A 99 KNELNLMKVDLETLEEQVIYTVDEE----------WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWE-KFAEFYHTNPT 167 (396)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTT----------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH-HHHHHHHTCCC
T ss_pred EcCCcEEEEECCCCCcEEEEecccc----------cCCCCCEEEeccCCccccccccccccCCCCcce-eeeeeccCCCc
Confidence 5555699999988776555332111 11100111111100 000000 000 000 00234
Q ss_pred ceEEEEcCCCCeEEEeecCCCCCceeEEcc-CCCEEEEEecC-C----CeEEEEEecCCCCCceee-ecCCC-CCceeee
Q 048181 179 GRLLSYNPRSSQVTVLLRNLTGPAGVAISV-DSSFLLVSEFT-G----NRTLKYWLRGPRANSFDI-INFQA-KPHNIKR 250 (310)
Q Consensus 179 G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~-dg~~Lyv~d~~-~----~~I~~~~~~~~~~g~~~~-~~l~g-~Pdgl~~ 250 (310)
..|+.+|..+++.+.+.........++|+| ||+.|+++... . .+|+.+++++.. ...+ ...+. .+..+++
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFW 245 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEE
Confidence 679999988888776665555667899999 78756554332 2 579999886531 1122 21111 2445688
Q ss_pred CCCCCCc-EEEE
Q 048181 251 NPGLLQT-FWEA 261 (310)
Q Consensus 251 d~~~dG~-l~va 261 (310)
++ ||+ |+.+
T Consensus 246 sp--dg~~l~~~ 255 (396)
T 3c5m_A 246 IP--DGSAMAYV 255 (396)
T ss_dssp CT--TSSCEEEE
T ss_pred CC--CCCEEEEE
Confidence 88 886 4444
No 210
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.96 E-value=0.00041 Score=71.97 Aligned_cols=178 Identities=11% Similarity=0.031 Sum_probs=109.0
Q ss_pred CcceEEEc-cCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCC-ceeeEEEecCCCeEEEEe
Q 048181 35 GGESIAFE-PVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICR-RTFGLALHYATRQLYIAD 112 (310)
Q Consensus 35 ~Pegia~d-~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~P~Gla~d~~~g~LyVad 112 (310)
...+++|. |+|..+.+.. .+.|+.++..++..... ..... ....+++. .+..|+.+.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~s-dg~~l~~~s 355 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV-------------------PEPLRIRYVRRGGD-TKVAFIHGT 355 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC-------------------SCCSCEEEEEECSS-SEEEEEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc-------------------cCCCcceEEeeeEc-CCCeEEEEE
Confidence 47899999 9987443333 78888888764432110 01122 44566774 233455544
Q ss_pred CCCcEE-EEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEE-EEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 113 AYSGLL-VVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVY-FTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 113 ~~~gi~-~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~ly-vtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
....++ .++.++++...+. . ....+..++++|+ |+.. ++.. ++.|+.+|..+++
T Consensus 356 ~~~~l~~~~d~~~~~~~~l~-~----~~~~~~~~~~SpD-G~~la~~~~------------------~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEKFE-E----NLGNVFAMGVDRN-GKFAVVAND------------------RFEIMTVDLETGK 411 (1045)
T ss_dssp TTEEEEEEEETTTCCEEECC-C----CCCSEEEEEECTT-SSEEEEEET------------------TSEEEEEETTTCC
T ss_pred CCCceEEEEECCCCCceEec-C----CccceeeeEECCC-CCEEEEECC------------------CCeEEEEECCCCc
Confidence 444588 8898877665543 1 1234678999995 6544 3322 3579999998888
Q ss_pred EEEeecCC-CCCceeEEccCCCEEEEEecCC---------CeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCc-E
Q 048181 191 VTVLLRNL-TGPAGVAISVDSSFLLVSEFTG---------NRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQT-F 258 (310)
Q Consensus 191 ~~~~~~~l-~~pnGIa~~~dg~~Lyv~d~~~---------~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~-l 258 (310)
...+.... .....++|+|||++|+++.... ..|+.+++++ +.... ......+..+++++ ||. |
T Consensus 412 ~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~---g~~~~l~~~~~~~~~~~~sp--dG~~l 486 (1045)
T 1k32_A 412 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG---RKIFAATTENSHDYAPAFDA--DSKNL 486 (1045)
T ss_dssp EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT---TEEEECSCSSSBEEEEEECT--TSCEE
T ss_pred eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC---CcEEEeeCCCcccCCceEcC--CCCEE
Confidence 77766333 3348999999999886665432 5788888764 22221 11122345678888 886 4
Q ss_pred EEEE
Q 048181 259 WEAA 262 (310)
Q Consensus 259 ~va~ 262 (310)
|.+.
T Consensus 487 ~~~s 490 (1045)
T 1k32_A 487 YYLS 490 (1045)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5444
No 211
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.96 E-value=0.0071 Score=52.19 Aligned_cols=202 Identities=11% Similarity=-0.037 Sum_probs=114.0
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
....+++|.+++.++++...++.|..++..... ..+. .+.........++++ ++.|+.+
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-----------------~~~~~~~~i~~~~~~--~~~l~~~ 120 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY-----------------TLIGHQGNVCSLSFQ--DGVVISG 120 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C-----------------EECCCSSCEEEEEEE--TTEEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc-----------------chhhcccCEEEEEec--CCEEEEE
Confidence 356789999999988888888888877654211 1000 011122334567774 4556555
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.....|..+| .......+ .. .-.....+++.+.+++.+++-. .+|.+..+|.. ...
T Consensus 121 ~~d~~i~~~d-~~~~~~~~-~~----~~~~v~~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~-~~~ 176 (313)
T 3odt_A 121 SWDKTAKVWK-EGSLVYNL-QA----HNASVWDAKVVSFSENKFLTAS-----------------ADKTIKLWQND-KVI 176 (313)
T ss_dssp ETTSEEEEEE-TTEEEEEE-EC----CSSCEEEEEEEETTTTEEEEEE-----------------TTSCEEEEETT-EEE
T ss_pred eCCCCEEEEc-CCcEEEec-cc----CCCceeEEEEccCCCCEEEEEE-----------------CCCCEEEEecC-ceE
Confidence 5554577777 22222222 11 1123456676652244444432 24677777742 222
Q ss_pred EEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCCCC
Q 048181 192 TVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQPA 269 (310)
Q Consensus 192 ~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~ 269 (310)
..+.. .-.....++++++++ +++-...+.|..+++... ..... ..-.+....+++.+ +|.++.+....
T Consensus 177 ~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg---- 246 (313)
T 3odt_A 177 KTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTG--DVLRTYEGHESFVYCIKLLP--NGDIVSCGEDR---- 246 (313)
T ss_dssp EEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECT--TSCEEEEETTS----
T ss_pred EEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCch--hhhhhhhcCCceEEEEEEec--CCCEEEEecCC----
Confidence 22222 334568999999986 556667889999987532 11111 22234467789998 88766665543
Q ss_pred CCCceeeEEEC-CCCcEEEEEecCC
Q 048181 270 GTPVPIGQRIS-AFGAVLDTISFEA 293 (310)
Q Consensus 270 ~~~~~~v~~~~-~~G~~~~~~~~p~ 293 (310)
.+..+| .+++.+..+..+.
T Consensus 247 -----~v~iwd~~~~~~~~~~~~~~ 266 (313)
T 3odt_A 247 -----TVRIWSKENGSLKQVITLPA 266 (313)
T ss_dssp -----EEEEECTTTCCEEEEEECSS
T ss_pred -----EEEEEECCCCceeEEEeccC
Confidence 566666 3566666665554
No 212
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.96 E-value=0.0094 Score=53.45 Aligned_cols=168 Identities=14% Similarity=0.104 Sum_probs=98.3
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
....+++|.+ +|+++++...+|.|..++...... .+... ..+.- ..............+++.+.++++++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCK------AVCSI-GRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEEC------EEEEE-CTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecc------ccccc-cccccccCCCcEEEEEEccCCCcEEE
Confidence 4567899999 999888988899999998774321 11000 00000 00000112334568888743555555
Q ss_pred E-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCC--CCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 111 A-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG--TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 111 a-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~--~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
+ .....|..+|..+++....... . .....+++.+. ++.++++-. .+|.+..+|..
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~d~~ 174 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNF-E----ETVYSHHMSPVSTKHCLVAVGT-----------------RGPKVQLCDLK 174 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEEC-S----SCEEEEEECSSCSSCCEEEEEE-----------------SSSSEEEEESS
T ss_pred EEeCCCeEEEeeCCCCccceeccC-C----CceeeeEeecCCCCCcEEEEEc-----------------CCCeEEEEeCC
Confidence 4 4444488888887765433221 1 12345566552 122443322 24678888876
Q ss_pred CCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 188 SSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 188 ~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+++..... ..-.....++++|++++++++-...+.|..+++..
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 65433322 23334579999999987777878888999998864
No 213
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.93 E-value=0.00053 Score=67.61 Aligned_cols=143 Identities=10% Similarity=0.007 Sum_probs=85.2
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEe
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIAD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad 112 (310)
.+.+++|.+||.++++ ..++.|+.++..++. ..+. . +. . ........+++. ++|+ |..+.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-~----------~~---~--~~~~~v~~~~~S-pDg~~l~~~~ 79 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-E----------GK---K--IESLRAIRYEIS-PDREYALFSY 79 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-C----------TT---T--TTTTTCSEEEEC-TTSSEEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-c----------cc---c--ccccccceEEEC-CCCCEEEEEe
Confidence 4778899999996665 567889988876443 2221 0 00 0 000135678997 5666 44443
Q ss_pred CC---------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC-eEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 113 AY---------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG-VVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 113 ~~---------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G-~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
.. ..++.+|.++++.+.+... .+ .-..+..++++|+ | .|.++.. +.|+
T Consensus 80 ~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~-~~-~~~~~~~~~~SPd-G~~la~~~~-------------------~~i~ 137 (723)
T 1xfd_A 80 NVEPIYQHSYTGYYVLSKIPHGDPQSLDPP-EV-SNAKLQYAGWGPK-GQQLIFIFE-------------------NNIY 137 (723)
T ss_dssp SCCCCSSSCCCSEEEEEESSSCCCEECCCT-TC-CSCCCSBCCBCSS-TTCEEEEET-------------------TEEE
T ss_pred cCccceeecceeeEEEEECCCCceEeccCC-cc-ccccccccEECCC-CCEEEEEEC-------------------CeEE
Confidence 21 3478889888776544321 11 1123567889995 6 4444321 4688
Q ss_pred EEcCCCCeEEEeecCC-------------------CCCceeEEccCCCEEEEEe
Q 048181 183 SYNPRSSQVTVLLRNL-------------------TGPAGVAISVDSSFLLVSE 217 (310)
Q Consensus 183 ~~d~~~g~~~~~~~~l-------------------~~pnGIa~~~dg~~Lyv~d 217 (310)
.+|..+++...+...- ....+++|||||++|+++.
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred EEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 8887766655443321 1236899999999887765
No 214
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.0015 Score=59.17 Aligned_cols=198 Identities=12% Similarity=0.074 Sum_probs=113.0
Q ss_pred CCCcceEEEccC-CCEEEEEeCCCeEEEEECCCce------EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 33 AFGGESIAFEPV-GGAFYTGVADGRILKYQAPDGF------TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 33 ~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
-....+++|.++ ++++++...++.|..++..... ..+.. ............+++.+..
T Consensus 113 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~~~ 177 (416)
T 2pm9_A 113 SSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP---------------GQSMSSVDEVISLAWNQSL 177 (416)
T ss_dssp SSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC---------------CCSCCSSCCCCEEEECSSC
T ss_pred ccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc---------------ccccCCCCCeeEEEeCCCC
Confidence 345678999998 7888888888888888876432 11100 0001122345689997433
Q ss_pred CeEEEEeCCC-cEEEEeCCCCeEEEeeccCCC--ccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 106 RQLYIADAYS-GLLVVGPNGRLATQLATGAEG--QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 106 g~LyVad~~~-gi~~id~~~~~~~~~~~~~~g--~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
+.++++.... .|..+|.++++.......... ..-...+.+++++++..++++-... ...+.|.
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------------~~~~~i~ 243 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS--------------DNDPSIL 243 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC--------------SSSCCCC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC--------------CCCceEE
Confidence 6666654443 488889887654332221100 0024568899999523555554321 0112677
Q ss_pred EEcCCCC-eE-EEee-cCCCCCceeEEcc-CCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCC-
Q 048181 183 SYNPRSS-QV-TVLL-RNLTGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQ- 256 (310)
Q Consensus 183 ~~d~~~g-~~-~~~~-~~l~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG- 256 (310)
.+|..++ .. ..+. ..-.....++|+| +++ ++++-...+.|..+++... ..... ....+....+++.+ +|
T Consensus 244 ~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~--~~~ 318 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAP--EAP 318 (416)
T ss_dssp EEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSC--CEEEEEECSSSCCCCEEECT--TCT
T ss_pred EEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCC--ccceeecCCCCceEEEEECC--CCC
Confidence 7776553 22 2222 2233568999999 777 5556667888998887532 11111 22234466788888 88
Q ss_pred cEEEEEec
Q 048181 257 TFWEAAII 264 (310)
Q Consensus 257 ~l~va~~~ 264 (310)
.++++...
T Consensus 319 ~~l~s~~~ 326 (416)
T 2pm9_A 319 DLFACASF 326 (416)
T ss_dssp TEEEECCS
T ss_pred CEEEEEec
Confidence 66666544
No 215
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.92 E-value=0.0097 Score=52.47 Aligned_cols=157 Identities=12% Similarity=-0.061 Sum_probs=94.5
Q ss_pred CCcceEEEccC----CCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 34 FGGESIAFEPV----GGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~~----G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
....+++|.++ |.++++...++.|..++.......... .........+++.+.+++++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~------------------~~~~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY------------------VGHGNAINELKFHPRDPNLL 131 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE------------------ESCCSCEEEEEECSSCTTEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee------------------cCCCCcEEEEEECCCCCCEE
Confidence 34678899988 668888888999999987643221110 01223456889974266655
Q ss_pred EE-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IA-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Va-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++ .....|..+|..+++.........+ .-.....++++++ |+.+++-.. +|.|..+|..+
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~-----------------dg~i~i~d~~~ 192 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLL-GEKIMSCGM-----------------DHSLKLWRINS 192 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTT-SSEEEEEET-----------------TSCEEEEESCS
T ss_pred EEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCC-CCEEEEecC-----------------CCCEEEEECCC
Confidence 54 4444588889887655433321111 2234678999995 766555322 35666666554
Q ss_pred CeEEE-----------------------------eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 189 SQVTV-----------------------------LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 189 g~~~~-----------------------------~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
++... ....-..-+.++++ ++ ++++-...+.|..+++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGK 260 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESS
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCC
Confidence 32110 00022345788888 55 566667788999998864
No 216
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.90 E-value=0.003 Score=62.18 Aligned_cols=152 Identities=7% Similarity=-0.017 Sum_probs=81.1
Q ss_pred eeeEEEecCCCeEEEE--eCC---CcEEEEeCCCCeEEEeeccCCCcccc-CccceEEeCCCCe-EEEE-cCCCccCccc
Q 048181 96 TFGLALHYATRQLYIA--DAY---SGLLVVGPNGRLATQLATGAEGQAFH-FLDGLDVDQGTGV-VYFT-DASGVYDFRT 167 (310)
Q Consensus 96 P~Gla~d~~~g~LyVa--d~~---~gi~~id~~~~~~~~~~~~~~g~~~~-~pndvavd~~~G~-lyvt-d~~~~~~~~~ 167 (310)
...+++. ++|++++. +.. ..|+.+|.++++...+.......... .+..++++|+ |+ |++. ......
T Consensus 257 ~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~---- 330 (723)
T 1xfd_A 257 ITMVKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD-GRKFFFIRAIPQGG---- 330 (723)
T ss_dssp EEEEEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT-SCSEEEEEEECCSS----
T ss_pred eEEEEEe-CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC-CCeEEEEEecccCC----
Confidence 3467886 68876643 222 13888899887765443221110111 1247899995 65 5553 211100
Q ss_pred eeEeeeecCCCceEEEEc-CCCCe---EEEeecC-CCCCceeEEccCCCEEEEEecC----CCeEEEEEecCCCCCcee-
Q 048181 168 IVKLNITNDSTGRLLSYN-PRSSQ---VTVLLRN-LTGPAGVAISVDSSFLLVSEFT----GNRTLKYWLRGPRANSFD- 237 (310)
Q Consensus 168 ~~~~~~~~~~~G~l~~~d-~~~g~---~~~~~~~-l~~pnGIa~~~dg~~Lyv~d~~----~~~I~~~~~~~~~~g~~~- 237 (310)
.....+|+.+| ..+++ .+.+..+ ....+-++|+|||+.||++... ..+||+++.++. ....
T Consensus 331 -------~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 401 (723)
T 1xfd_A 331 -------RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN--FNRQC 401 (723)
T ss_dssp -------SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT--CCCBC
T ss_pred -------CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC--CCcce
Confidence 00123688888 45454 4443322 2222336899999999887654 345777665432 1111
Q ss_pred e-ecC--CCCCceeeeCCCCCCcEEEEEec
Q 048181 238 I-INF--QAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 238 ~-~~l--~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
+ ..+ .+....+++++ ||+.++....
T Consensus 402 l~~~~~~~~~~~~~~~sp--dg~~l~~~~~ 429 (723)
T 1xfd_A 402 LSCDLVENCTYFSASFSH--SMDFFLLKCE 429 (723)
T ss_dssp SSTTSSSSCCCCEEEECT--TSSEEEEECC
T ss_pred ecccccCCCCeEEEEECC--CCCEEEEEcc
Confidence 2 111 23356788999 9976655433
No 217
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.90 E-value=0.00099 Score=60.36 Aligned_cols=126 Identities=9% Similarity=-0.008 Sum_probs=75.4
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 105 TRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 105 ~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++.+|++....+++.+|+++|+...- ... .....++++ ++++|+++. +|.|+.+
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~-~~~-----~~~~~~~~~--~~~l~~~~~------------------~g~l~~~ 292 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWK-REL-----GSVNDFIVD--GNRIYLVDQ------------------NDRVMAL 292 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEE-ECC-----CCEEEEEEE--TTEEEEEET------------------TCCEEEE
T ss_pred CCEEEEEecCcEEEEEECCCCcEEee-ccC-----CCCCCceEE--CCEEEEEcC------------------CCeEEEE
Confidence 78999987666799999988765422 111 123456666 589999864 3679999
Q ss_pred cCCCCeEEEeecCC--CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCC-C-CCceeeeCCCCCCcEE
Q 048181 185 NPRSSQVTVLLRNL--TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQ-A-KPHNIKRNPGLLQTFW 259 (310)
Q Consensus 185 d~~~g~~~~~~~~l--~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~-g-~Pdgl~~d~~~dG~l~ 259 (310)
|+.+|+..-....+ ......++. ++.||+... .+.|+.++... |+..- ..+. . ......+ . +|.||
T Consensus 293 d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~-~g~l~~~d~~t---G~~~~~~~~~~~~~~~~~~~-~--~~~l~ 363 (376)
T 3q7m_A 293 TIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDS-EGYLHWINVED---GRFVAQQKVDSSGFQTEPVA-A--DGKLL 363 (376)
T ss_dssp ETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECT-TSEEEEEETTT---CCEEEEEECCTTCBCSCCEE-E--TTEEE
T ss_pred ECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeC-CCeEEEEECCC---CcEEEEEecCCCcceeCCEE-E--CCEEE
Confidence 99888764333322 122344443 346887754 67888888643 33221 2221 1 1112233 4 68899
Q ss_pred EEEecC
Q 048181 260 EAAIIT 265 (310)
Q Consensus 260 va~~~~ 265 (310)
++...+
T Consensus 364 v~~~~G 369 (376)
T 3q7m_A 364 IQAKDG 369 (376)
T ss_dssp EEBTTS
T ss_pred EEeCCC
Confidence 987654
No 218
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.90 E-value=0.007 Score=63.44 Aligned_cols=190 Identities=11% Similarity=0.043 Sum_probs=112.3
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeE
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQL 108 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~L 108 (310)
.+.-....+++|.++|.++++...++.|..++...+....... ........+++.+. ++.+
T Consensus 654 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~ 715 (1249)
T 3sfz_A 654 KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD------------------EHSEQVNCCHFTNKSNHLL 715 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE------------------CCSSCEEEEEECSSSSCCE
T ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc------------------CCCCcEEEEEEecCCCceE
Confidence 3333456789999999988888889999999977443221110 11233456788532 3344
Q ss_pred EEEeC-CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 109 YIADA-YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 109 yVad~-~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
+++.. ...|..+|..+++...... + +-...+.++++++ |+.+++-+. +|.|..+|..
T Consensus 716 l~sg~~d~~v~vwd~~~~~~~~~~~---~-h~~~v~~~~~sp~-~~~l~s~s~-----------------dg~v~vwd~~ 773 (1249)
T 3sfz_A 716 LATGSNDFFLKLWDLNQKECRNTMF---G-HTNSVNHCRFSPD-DELLASCSA-----------------DGTLRLWDVR 773 (1249)
T ss_dssp EEEEETTSCEEEEETTSSSEEEEEC---C-CSSCEEEEEECSS-TTEEEEEES-----------------SSEEEEEEGG
T ss_pred EEEEeCCCeEEEEECCCcchhheec---C-CCCCEEEEEEecC-CCEEEEEEC-----------------CCeEEEEeCC
Confidence 44433 3348888887765432221 1 2234678999994 776666432 3566666654
Q ss_pred CCeEEEeec--------------CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeC
Q 048181 188 SSQVTVLLR--------------NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRN 251 (310)
Q Consensus 188 ~g~~~~~~~--------------~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d 251 (310)
+++...... .-.....++|+|||+.++++. .+.+..+++... ..... ..-.+....+++.
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~--~~~~~~~~~~~~~v~~~~~s 849 (1249)
T 3sfz_A 774 SANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTS--GLLAEIHTGHHSTIQYCDFS 849 (1249)
T ss_dssp GTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTC--CEEEEEECSSSSCCCEEEEC
T ss_pred CCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCC--CceeEEcCCCCCceEEEEEc
Confidence 443222111 111457899999999777664 578888887542 11111 1223446778888
Q ss_pred CCCCCcEEEEEecC
Q 048181 252 PGLLQTFWEAAIIT 265 (310)
Q Consensus 252 ~~~dG~l~va~~~~ 265 (310)
+ +|.+.++....
T Consensus 850 p--~~~~l~~~~~d 861 (1249)
T 3sfz_A 850 P--YDHLAVIALSQ 861 (1249)
T ss_dssp S--STTEEEEECSS
T ss_pred C--CCCEEEEEeCC
Confidence 8 88776665443
No 219
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.87 E-value=0.0035 Score=55.31 Aligned_cols=187 Identities=9% Similarity=0.059 Sum_probs=104.7
Q ss_pred CcceEEEccC---CCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEE------EecC
Q 048181 35 GGESIAFEPV---GGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLA------LHYA 104 (310)
Q Consensus 35 ~Pegia~d~~---G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla------~d~~ 104 (310)
...+++|.++ |.++++...++.|..++..... .... +.........+. +. +
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------------------~~~~~~~v~~~~~~~~~~~s-~ 127 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS------------------VKGHKEIINAIDGIGGLGIG-E 127 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE------------------ECCCSSCEEEEEEESGGGCC--
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE------------------EEecccceEEEeeccccccC-C
Confidence 4567888887 6888888888999888876332 1100 001112234453 33 3
Q ss_pred CCeEEE-EeCCCcEEEEeCCCCe--EEEeeccCCCccccCccceE----EeCCCCeEEEEcCCCccCccceeEeeeecCC
Q 048181 105 TRQLYI-ADAYSGLLVVGPNGRL--ATQLATGAEGQAFHFLDGLD----VDQGTGVVYFTDASGVYDFRTIVKLNITNDS 177 (310)
Q Consensus 105 ~g~LyV-ad~~~gi~~id~~~~~--~~~~~~~~~g~~~~~pndva----vd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~ 177 (310)
++++++ +.....|..+|..+++ ...+ ....+..-.....++ +++ +++++++-. .
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~-----------------~ 188 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKDDPVANM-EPVQGENKRDCWTVAFGNAYNQ-EERVVCAGY-----------------D 188 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCSSCSEEE-CCCTTSCCCCEEEEEEECCCC--CCCEEEEEE-----------------T
T ss_pred CccEEEEEeCCCeEEEEeCCCCCCcceec-cccCCCCCCceEEEEEEeccCC-CCCEEEEEc-----------------c
Confidence 554444 4444458888877653 2222 221221122344555 556 366655532 2
Q ss_pred CceEEEEcCCCCeEEEeecCCCCCceeEEcc---CCCEEEEEecCCCeEEEEEecCCCC-Cceee---ecCCCCCceeee
Q 048181 178 TGRLLSYNPRSSQVTVLLRNLTGPAGVAISV---DSSFLLVSEFTGNRTLKYWLRGPRA-NSFDI---INFQAKPHNIKR 250 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~---dg~~Lyv~d~~~~~I~~~~~~~~~~-g~~~~---~~l~g~Pdgl~~ 250 (310)
+|.|..+|..+++.......-...+.++++| +++.|++ -...+.|..|++..... ..... .........+++
T Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA-TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE-EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEE
T ss_pred CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE-ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEE
Confidence 4788888988777655444445678999999 8886555 46778888888764211 11111 122334566778
Q ss_pred CCCCCCc-EEEEE
Q 048181 251 NPGLLQT-FWEAA 262 (310)
Q Consensus 251 d~~~dG~-l~va~ 262 (310)
.+ +|. +.++.
T Consensus 268 ~~--~~~~~l~~~ 278 (357)
T 3i2n_A 268 LP--QNRELFLTA 278 (357)
T ss_dssp ET--TEEEEEEEE
T ss_pred CC--CCCcEEEEE
Confidence 77 776 44443
No 220
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.87 E-value=0.002 Score=58.13 Aligned_cols=165 Identities=10% Similarity=0.038 Sum_probs=101.0
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA 113 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~ 113 (310)
....+++|.++| ++++...++.|..++.............. .-.........++++ ++++++++..
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~h~~~~~~i~~i~~~-~~~~~l~~~~ 252 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH------------SMINNSNSIRSVKFS-PQGSLLAIAH 252 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---------------CCCCCEEEEEEC-SSTTEEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccc------------cccccCCccceEEEC-CCCCEEEEEe
Confidence 357789999999 88888889999999987543221110000 000003346688997 5666555433
Q ss_pred C----CcEEEEeCCCCeEEEeeccCC--C-------ccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCce
Q 048181 114 Y----SGLLVVGPNGRLATQLATGAE--G-------QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGR 180 (310)
Q Consensus 114 ~----~gi~~id~~~~~~~~~~~~~~--g-------~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~ 180 (310)
. ..|..+|..+++......... . ..-.....++++++ |+++++-. .+|.
T Consensus 253 ~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~-----------------~dg~ 314 (397)
T 1sq9_A 253 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAG-----------------WDGK 314 (397)
T ss_dssp EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEE-----------------TTSE
T ss_pred cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCC-CCEEEEEe-----------------CCCe
Confidence 3 348888887655322221100 0 01234678999994 77666543 2477
Q ss_pred EEEEcCCCCeEEEeec------C----------------CCCCceeEEccCCC---------EEEEEecCCCeEEEEEec
Q 048181 181 LLSYNPRSSQVTVLLR------N----------------LTGPAGVAISVDSS---------FLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 181 l~~~d~~~g~~~~~~~------~----------------l~~pnGIa~~~dg~---------~Lyv~d~~~~~I~~~~~~ 229 (310)
|..+|..+++...... . -...+.++|+|+|+ .++++-...+.|..+++.
T Consensus 315 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 315 LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 8888877665544333 2 34568999999983 366676778889888876
Q ss_pred C
Q 048181 230 G 230 (310)
Q Consensus 230 ~ 230 (310)
+
T Consensus 395 ~ 395 (397)
T 1sq9_A 395 G 395 (397)
T ss_dssp C
T ss_pred C
Confidence 4
No 221
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.85 E-value=0.00062 Score=65.61 Aligned_cols=189 Identities=15% Similarity=0.116 Sum_probs=106.5
Q ss_pred CcceEEEccCCC-EEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-E
Q 048181 35 GGESIAFEPVGG-AFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-A 111 (310)
Q Consensus 35 ~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-a 111 (310)
+...++|.++|+ ++|+....+.+..++.+++. +.+.. . .. ..++++ ++|+.++ +
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--------------------~-~~-~~~~~s-pDG~~la~~ 167 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--------------------L-PG-FGFVSD-IRGDLIAGL 167 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--------------------E-SS-CEEEEE-EETTEEEEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--------------------C-CC-ceEEEC-CCCCEEEEE
Confidence 445667777773 56666555555566655443 22210 0 01 567887 5666544 3
Q ss_pred eCC----CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 112 DAY----SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 112 d~~----~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
... ..|+.+|.++++.+.+... . ...+.++++|+ |+.+++... ....+|+++|.+
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~-~----~~~~~~~~SpD-G~~l~~~~~---------------~~~~~i~~~d~~ 226 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSG-E----GSFSSASISPG-MKVTAGLET---------------AREARLVTVDPR 226 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCS-S----CEEEEEEECTT-SCEEEEEEC---------------SSCEEEEEECTT
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecC-C----CccccceECCC-CCEEEEccC---------------CCeeEEEEEcCC
Confidence 221 2389999988877655321 1 22478999995 765443211 111379999998
Q ss_pred CCeEEEeecCC-CCCceeE--------EccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcE
Q 048181 188 SSQVTVLLRNL-TGPAGVA--------ISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTF 258 (310)
Q Consensus 188 ~g~~~~~~~~l-~~pnGIa--------~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l 258 (310)
+++.+ +.... ....+++ |+||| .+|++-...+++..|.+ |. .. ....+....++++ +|.+
T Consensus 227 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~----~~-~~~~~~v~~~~~s---dg~~ 295 (582)
T 3o4h_A 227 DGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GE----RV-EAPQGNHGRVVLW---RGKL 295 (582)
T ss_dssp TCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TE----EE-CCCSSEEEEEEEE---TTEE
T ss_pred CCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CC----ee-ccCCCceEEEEec---CCEE
Confidence 88877 44332 2345566 99999 58887777788777776 32 11 1111223456665 4666
Q ss_pred EEEEecCCCCCCCCceeeEEECCCC
Q 048181 259 WEAAIITRQPAGTPVPIGQRISAFG 283 (310)
Q Consensus 259 ~va~~~~~~~~~~~~~~v~~~~~~G 283 (310)
++.......+ +.+..++.++
T Consensus 296 l~~~s~~~~p-----~~l~~~d~~~ 315 (582)
T 3o4h_A 296 VTSHTSLSTP-----PRIVSLPSGE 315 (582)
T ss_dssp EEEEEETTEE-----EEEEEETTCC
T ss_pred EEEEcCCCCC-----CeEEEEcCCC
Confidence 5554433211 3455566555
No 222
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.81 E-value=0.01 Score=53.24 Aligned_cols=159 Identities=8% Similarity=-0.029 Sum_probs=85.8
Q ss_pred eeEEEecCCCe-EEEE-eCC-----CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccce
Q 048181 97 FGLALHYATRQ-LYIA-DAY-----SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTI 168 (310)
Q Consensus 97 ~Gla~d~~~g~-LyVa-d~~-----~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~ 168 (310)
..+++.+.+|+ |+++ +.. ..|+.++.++++.+.+... .+...+..++++|+ |+ |+++....
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~~~~spd-g~~l~~~~~~~------- 259 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH---AEGESCTHEFWIPD-GSAMAYVSYFK------- 259 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC---CTTEEEEEEEECTT-SSCEEEEEEET-------
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc---CCCccccceEECCC-CCEEEEEecCC-------
Confidence 35566531443 5444 322 2488888877665544321 11123566789995 65 55543211
Q ss_pred eEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEcc-CCCEEEEEec---------------CCCeEEEEEecCCC
Q 048181 169 VKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISV-DSSFLLVSEF---------------TGNRTLKYWLRGPR 232 (310)
Q Consensus 169 ~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~-dg~~Lyv~d~---------------~~~~I~~~~~~~~~ 232 (310)
....+.|+.+|..+++.+.+.. +..-+ ++++| ||+.|+++.. ....|+++++++..
T Consensus 260 ------~~~~~~l~~~d~~~g~~~~l~~-~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 260 ------GQTDRVIYKANPETLENEEVMV-MPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ------TTCCEEEEEECTTTCCEEEEEE-CCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred ------CCccceEEEEECCCCCeEEeee-CCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 1122459999988787665442 22223 89999 9996555432 34689999886432
Q ss_pred CCceeeecCCC-----------CCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEECCCCc
Q 048181 233 ANSFDIINFQA-----------KPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRISAFGA 284 (310)
Q Consensus 233 ~g~~~~~~l~g-----------~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~~G~ 284 (310)
. ..+..... ....+++++ ||. |+.+..... ...+.+++.++.
T Consensus 332 ~--~~l~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~s~~~~------~~~l~~~~~~~~ 385 (396)
T 3c5m_A 332 A--QKLCKHSTSWDVLDGDRQITHPHPSFTP--NDDGVLFTSDFEG------VPAIYIADVPES 385 (396)
T ss_dssp C--CEEEECCCCCCCBTTBSSTTCCCCEECT--TSSEEEEEECTTS------SCEEEEEECCTT
T ss_pred e--EEccCCCCccccccccccCCCCCceEcc--CCCeEEEEecCCC------CceEEEEEEccc
Confidence 1 12211111 134567888 885 444433222 146777775544
No 223
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.0094 Score=61.01 Aligned_cols=198 Identities=10% Similarity=0.018 Sum_probs=120.4
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEeC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIADA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad~ 113 (310)
...+++|+|+|.++.++..++.|+-++..+....... .....-..+++. + |+ |+.+..
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-------------------~~~~~V~~l~fs-p-g~~L~S~s~ 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-------------------EDRSAIKEMRFV-K-GIYLVVINA 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-------------------SSCCCEEEEEEE-T-TTEEEEEET
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-------------------CCCCCEEEEEEc-C-CCEEEEEEC
Confidence 5789999999999999999999999987654332210 112234688997 4 55 554555
Q ss_pred CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEE
Q 048181 114 YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTV 193 (310)
Q Consensus 114 ~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~ 193 (310)
...|...|.++++...... .. ...+.++++|+ |+..++-. .+|.|..+|..+++...
T Consensus 78 D~~v~lWd~~~~~~~~~~~-~~----~~V~~v~~sp~-g~~l~sgs-----------------~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVF-VP----GKITSIDTDAS-LDWMLIGL-----------------QNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp TCEEEEEETTTCSEEEEEE-CS----SCEEEEECCTT-CSEEEEEE-----------------TTSCEEEEETTTTEEEE
T ss_pred cCeEEEEECCCCcEEEEEc-CC----CCEEEEEECCC-CCEEEEEc-----------------CCCcEEEEECCCCcccc
Confidence 5558888887765322111 11 23578899995 65554432 24677778877665431
Q ss_pred e------------ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecC-----------------CC
Q 048181 194 L------------LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INF-----------------QA 243 (310)
Q Consensus 194 ~------------~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l-----------------~g 243 (310)
. .......+.|+|+|++..++++-...+.| .+++..... ...+ ... ..
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI-KQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE-EEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce-EEEEecccCCcCCCcccccccccccCC
Confidence 1 01123457999999754455566677888 787753210 0011 110 02
Q ss_pred CCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEE
Q 048181 244 KPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDT 288 (310)
Q Consensus 244 ~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~ 288 (310)
....+++.+ +|.+.++...-+ .+..+|. +|+.+..
T Consensus 213 ~V~~v~fsp--dg~~lasgs~Dg--------~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 213 KVIQSLYHP--NSLHIITIHEDN--------SLVFWDANSGHMIMA 248 (902)
T ss_dssp CEEEEEECT--TSSEEEEEETTC--------CEEEEETTTCCEEEE
T ss_pred CeEEEEEcC--CCCEEEEEECCC--------eEEEEECCCCcEEEE
Confidence 245788999 998777766542 5777775 5776543
No 224
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.78 E-value=0.0093 Score=55.08 Aligned_cols=157 Identities=11% Similarity=0.092 Sum_probs=91.1
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD 112 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad 112 (310)
..-.+++|.| +++++++...++.|..++..++........ .........++++ .+++++++-
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~l~~g 227 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS----------------DTINIWFCSLDVS-ASSRMVVTG 227 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC----------------SSCSCCCCCEEEE-TTTTEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc----------------CCCCccEEEEEEC-CCCCEEEEE
Confidence 3456899997 688888888899999998876543221100 0111223468887 567666654
Q ss_pred CCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 113 AYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 113 ~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
... .|..+|.++..+..+ .+ .-...+.++++|++..++++-.. +|.|..+|..+.+.
T Consensus 228 ~~dg~i~~wd~~~~~~~~~----~~-h~~~v~~v~~~p~~~~~~~s~s~-----------------d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 228 DNVGNVILLNMDGKELWNL----RM-HKKKVTHVALNPCCDWFLATASV-----------------DQTVKIWDLRQVRG 285 (435)
T ss_dssp CSSSBEEEEESSSCBCCCS----BC-CSSCEEEEEECTTCSSEEEEEET-----------------TSBCCEEETTTCCS
T ss_pred eCCCcEeeeccCcceeEEE----ec-ccceEEeeeecCCCceEEEEecC-----------------cceeeEEecccccc
Confidence 443 478888776443222 11 12345788999853345554322 34555555443221
Q ss_pred E-Eee---cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 192 T-VLL---RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 192 ~-~~~---~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
. .+. ..-..-+.++|+|||++| ++-...+.|..+++..
T Consensus 286 ~~~~~~~~~h~~~v~~~~~spdg~~l-~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 286 KASFLYSLPHRHPVNAACFSPDGARL-LTTDQKSEIRVYSASQ 327 (435)
T ss_dssp SSCCSBCCBCSSCEEECCBCTTSSEE-EEEESSSCEEEEESSS
T ss_pred cceEEEeeeccccccceeECCCCCee-EEEcCCCEEEEEECCC
Confidence 1 111 111234788999999855 5556778888888753
No 225
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.78 E-value=0.018 Score=51.22 Aligned_cols=186 Identities=11% Similarity=0.051 Sum_probs=105.7
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-Ee
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-AD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad 112 (310)
....++++.+++.++++...++.|.-++...+...... .........+++. ++++.++ +.
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~------------------~~h~~~v~~v~~s-p~~~~l~s~~ 137 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRF------------------VGHQSEVYSVAFS-PDNRQILSAG 137 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEE------------------ECCCSCEEEEEEC-SSTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEE------------------cCCCCcEEEEEEC-CCCCEEEEEc
Confidence 44678999999998888889999999987643221110 0112345678997 5665444 44
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC----------eEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG----------VVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G----------~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
....|..+|..+........ ..+ .-...+.++++|. + .++++ ...+|.|.
T Consensus 138 ~d~~i~~wd~~~~~~~~~~~-~~~-~~~~v~~~~~~~~-~~~~~~~~~~~~~l~s-----------------~~~d~~i~ 197 (343)
T 2xzm_R 138 AEREIKLWNILGECKFSSAE-KEN-HSDWVSCVRYSPI-MKSANKVQPFAPYFAS-----------------VGWDGRLK 197 (343)
T ss_dssp TTSCEEEEESSSCEEEECCT-TTS-CSSCEEEEEECCC-CCSCSCCCSSCCEEEE-----------------EETTSEEE
T ss_pred CCCEEEEEeccCCceeeeec-ccC-CCceeeeeeeccc-cccccccCCCCCEEEE-----------------EcCCCEEE
Confidence 44457777876543322211 111 1223456777763 3 22222 23457788
Q ss_pred EEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcEEEEE
Q 048181 183 SYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 183 ~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
.+|........+...-...+.++|+|||++ +++-...+.|..+++......... .........+++++ +|.+..+.
T Consensus 198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~-l~sgs~dg~v~iwd~~~~~~~~~~-~~~~~~v~~v~~sp--~~~~la~~ 273 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHESNVNHLSISPNGKY-IATGGKDKKLLIWDILNLTYPQRE-FDAGSTINQIAFNP--KLQWVAVG 273 (343)
T ss_dssp EEETTTEEEEEEECCSSCEEEEEECTTSSE-EEEEETTCEEEEEESSCCSSCSEE-EECSSCEEEEEECS--SSCEEEEE
T ss_pred EEcCCCceeEEEcCccccceEEEECCCCCE-EEEEcCCCeEEEEECCCCccccee-ecCCCcEEEEEECC--CCCEEEEE
Confidence 888542222223333345689999999984 556667888988887422111111 11112356678887 77655443
No 226
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.78 E-value=0.00032 Score=68.30 Aligned_cols=122 Identities=14% Similarity=0.174 Sum_probs=78.8
Q ss_pred CCCCceeeEEEecCCCeEEEEeCC----------------------CcEEEEeCCCCe-------EEEee--cc------
Q 048181 91 PICRRTFGLALHYATRQLYIADAY----------------------SGLLVVGPNGRL-------ATQLA--TG------ 133 (310)
Q Consensus 91 ~~~~~P~Gla~d~~~g~LyVad~~----------------------~gi~~id~~~~~-------~~~~~--~~------ 133 (310)
..+.+|-|+.+++.+|.+|++... ..|+++.++++. ...++ ..
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 346688999998779999998531 138888765331 11121 10
Q ss_pred ---------CCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCC--CCCc
Q 048181 134 ---------AEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNL--TGPA 202 (310)
Q Consensus 134 ---------~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l--~~pn 202 (310)
.....|..|..|++|+. |+|||...+....... +....+..++.+++.++++..++..- .-..
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~-----~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~T 534 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGD-----FAGMGNNQMLCADPATGEIRRFMVGPIGCEVT 534 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGG-----GTTTCSCEEEEECTTTCCEEEEEECCTTCEEE
T ss_pred cccccccccCCCCCccCCcceEECCC-CCEEEEecCCCccccc-----ccccccceEEEEeCCCCeEEEEEeCCCCccCc
Confidence 01225788999999995 9999865432111110 01123456888898888888776532 2346
Q ss_pred eeEEccCCCEEEEEec
Q 048181 203 GVAISVDSSFLLVSEF 218 (310)
Q Consensus 203 GIa~~~dg~~Lyv~d~ 218 (310)
|++|+||+++|||+-.
T Consensus 535 G~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 535 GISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTSSEEEEEEE
T ss_pred CeeECCCCCEEEEEEE
Confidence 9999999999999743
No 227
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.78 E-value=0.006 Score=63.21 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=91.0
Q ss_pred CcceEEEccCCCEEEEEeCCCeEE-EEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEe
Q 048181 35 GGESIAFEPVGGAFYTGVADGRIL-KYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIAD 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~-r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad 112 (310)
...+++|. +|..++....+.+|+ .++.+++.... +......+..++++ ++|+ |+++.
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-------------------l~~~~~~~~~~~~S-pDG~~la~~~ 397 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-------------------FEENLGNVFAMGVD-RNGKFAVVAN 397 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-------------------CCCCCCSEEEEEEC-TTSSEEEEEE
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-------------------ecCCccceeeeEEC-CCCCEEEEEC
Confidence 35567888 875444433367788 77776543211 01122456788997 5665 55555
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEE-EEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVY-FTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~ly-vtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
....|+.+|.++++...+..... .....++++|+ |+.. ++.....+.. .....+.|+.+|..+++.
T Consensus 398 ~~~~v~~~d~~tg~~~~~~~~~~----~~v~~~~~SpD-G~~la~~~~~~~~~~--------~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 398 DRFEIMTVDLETGKPTVIERSRE----AMITDFTISDN-SRFIAYGFPLKHGET--------DGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp TTSEEEEEETTTCCEEEEEECSS----SCCCCEEECTT-SCEEEEEEEECSSTT--------CSCCEEEEEEEETTTTEE
T ss_pred CCCeEEEEECCCCceEEeccCCC----CCccceEECCC-CCeEEEEecCccccc--------cCCCCCeEEEEECCCCcE
Confidence 55569999998887765542211 23468999995 7643 3322100000 001235799999888876
Q ss_pred EEeecCCCCCceeEEccCCCEEEEEec
Q 048181 192 TVLLRNLTGPAGVAISVDSSFLLVSEF 218 (310)
Q Consensus 192 ~~~~~~l~~pnGIa~~~dg~~Lyv~d~ 218 (310)
..+.........++|+|||++||+...
T Consensus 465 ~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 465 FAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred EEeeCCCcccCCceEcCCCCEEEEEec
Confidence 666655556778999999998887654
No 228
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.77 E-value=0.005 Score=58.77 Aligned_cols=142 Identities=8% Similarity=0.021 Sum_probs=88.3
Q ss_pred CceeeEEEecCCCeEEEEeC-CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEee
Q 048181 94 RRTFGLALHYATRQLYIADA-YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 94 ~~P~Gla~d~~~g~LyVad~-~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~ 172 (310)
..+..+++. ...|+++.. ...|..++..+++... ....+ .-.....++++++ |+++++-.
T Consensus 447 ~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~--~~~~~-~~~~v~~~~~s~~-g~~l~~~~------------- 507 (615)
T 1pgu_A 447 SPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSF--DLKTP-LRAKPSYISISPS-ETYIAAGD------------- 507 (615)
T ss_dssp SCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEE--ECSSC-CSSCEEEEEECTT-SSEEEEEE-------------
T ss_pred CCceEEEEc--CCEEEEeecCCCeEEEEECCCccccc--cccCC-ccCceEEEEECCC-CCEEEEcC-------------
Confidence 356678884 455555555 4458888887655432 12222 2245678999994 77766543
Q ss_pred eecCCCceEEEEcCCCCeEEEeec--CCCCCceeEEcc----------CCCEEEEEecCCCeEEEEEecCCCCCceee-e
Q 048181 173 ITNDSTGRLLSYNPRSSQVTVLLR--NLTGPAGVAISV----------DSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I 239 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~~g~~~~~~~--~l~~pnGIa~~~----------dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~ 239 (310)
.+|.|..+|..+++...... .-...+.++|+| ++++ +++-...+.|+.+++.... ..... .
T Consensus 508 ----~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~-l~~~~~dg~i~iw~~~~~~-~~~~~~~ 581 (615)
T 1pgu_A 508 ----VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL-VATGSLDTNIFIYSVKRPM-KIIKALN 581 (615)
T ss_dssp ----TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCE-EEEEETTSCEEEEESSCTT-CCEEETT
T ss_pred ----CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCE-EEEEcCCCcEEEEECCCCc-eechhhh
Confidence 24778888887776544333 234568999999 9984 5555677889999886421 11111 2
Q ss_pred cCCCCCceeeeCCCCCCcEEEEEe
Q 048181 240 NFQAKPHNIKRNPGLLQTFWEAAI 263 (310)
Q Consensus 240 ~l~g~Pdgl~~d~~~dG~l~va~~ 263 (310)
.-......+++.+ +|. .++..
T Consensus 582 ~h~~~v~~l~~s~--~~~-l~s~~ 602 (615)
T 1pgu_A 582 AHKDGVNNLLWET--PST-LVSSG 602 (615)
T ss_dssp SSTTCEEEEEEEE--TTE-EEEEE
T ss_pred cCccceEEEEEcC--CCC-eEEec
Confidence 2234467788998 888 44443
No 229
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.77 E-value=0.013 Score=56.77 Aligned_cols=80 Identities=9% Similarity=-0.106 Sum_probs=50.3
Q ss_pred ceeEEccCCCEEEEEec------------------------------------CCCeEEEEEecCCCCCceee-ecCCCC
Q 048181 202 AGVAISVDSSFLLVSEF------------------------------------TGNRTLKYWLRGPRANSFDI-INFQAK 244 (310)
Q Consensus 202 nGIa~~~dg~~Lyv~d~------------------------------------~~~~I~~~~~~~~~~g~~~~-~~l~g~ 244 (310)
.+++++|+++.+|+... ..+.|+.+++.. |+..- ......
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t---G~~~W~~~~~~~ 465 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT---GKAKWTKWEKFA 465 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT---CCEEEEEEESSC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC---CCEEEEecCCCC
Confidence 46899999998998642 235677776542 32211 111111
Q ss_pred Cceee-eCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecCCCc
Q 048181 245 PHNIK-RNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFEAQY 295 (310)
Q Consensus 245 Pdgl~-~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p~~~ 295 (310)
+.+.. ... +|.+|++.... .+..+|. +|+++-.+..+.+.
T Consensus 466 ~~~~~~~t~--gg~v~~g~~dg---------~l~a~D~~tG~~lw~~~~~~~~ 507 (571)
T 2ad6_A 466 AWGGTLYTK--GGLVWYATLDG---------YLKALDNKDGKELWNFKMPSGG 507 (571)
T ss_dssp CCSBCEEET--TTEEEEECTTS---------EEEEEETTTCCEEEEEECSSCC
T ss_pred ccceeEEEC--CCEEEEEcCCC---------eEEEEECCCCCEEEEEeCCCCc
Confidence 22322 344 67889876543 7899995 69999999998654
No 230
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.013 Score=51.92 Aligned_cols=193 Identities=10% Similarity=0.011 Sum_probs=107.0
Q ss_pred CCCCCCcceEEEccC--CCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC-
Q 048181 30 PPKAFGGESIAFEPV--GGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT- 105 (310)
Q Consensus 30 ~~~~~~Pegia~d~~--G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~- 105 (310)
.+.-....+++|.++ ++++++...++.|..++...+. ..... ..........+++. ++
T Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----------------~~~~~~~v~~~~~~-~~~ 113 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV-----------------HAVHSASVNSVQWA-PHE 113 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE-----------------ECCCSSCEEEEEEC-CGG
T ss_pred cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee-----------------ecCCCcceEEEEeC-CCC
Confidence 333345678899866 8888888889988888766432 11111 01122345688886 44
Q ss_pred -CeEEE-EeCCCcEEEEeCCCCeE--EEeeccCCCccccCccceEEeCC------------CCeEEEEcCCCccCcccee
Q 048181 106 -RQLYI-ADAYSGLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQG------------TGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 106 -g~LyV-ad~~~gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~------------~G~lyvtd~~~~~~~~~~~ 169 (310)
+++++ +.....|..+|..++.. ...... .-...+.++++|. ++.++++-.
T Consensus 114 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------- 179 (379)
T 3jrp_A 114 YGPLLLVASSDGKVSVVEFKENGTTSPIIIDA----HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG---------- 179 (379)
T ss_dssp GCSEEEEEETTSEEEEEECCTTSCCCEEEEEC----CTTCEEEEEECCCC----------CTTCEEEEEE----------
T ss_pred CCCEEEEecCCCcEEEEecCCCCceeeEEecC----CCCceEEEEEcCccccccccccCCCCCCEEEEEe----------
Confidence 55444 44444577777765421 111111 1123467777772 244444432
Q ss_pred EeeeecCCCceEEEEcCCCCe----EE-EeecCCCCCceeEEccC---CCEEEEEecCCCeEEEEEecCCCCC-ceee--
Q 048181 170 KLNITNDSTGRLLSYNPRSSQ----VT-VLLRNLTGPAGVAISVD---SSFLLVSEFTGNRTLKYWLRGPRAN-SFDI-- 238 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~----~~-~~~~~l~~pnGIa~~~d---g~~Lyv~d~~~~~I~~~~~~~~~~g-~~~~-- 238 (310)
.+|.|..+|..++. .. .+...-...+.++|+|+ ++ ++++-...+.|..+++...... ...+
T Consensus 180 -------~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 251 (379)
T 3jrp_A 180 -------ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLK 251 (379)
T ss_dssp -------TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESS
T ss_pred -------CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeec
Confidence 23566666654332 11 11122334579999999 65 5666667888888888643211 1112
Q ss_pred -ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 239 -INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 239 -~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.........+++++ +|.+.++...
T Consensus 252 ~~~~~~~v~~~~~s~--~g~~l~~~~~ 276 (379)
T 3jrp_A 252 EEKFPDVLWRASWSL--SGNVLALSGG 276 (379)
T ss_dssp SSCCSSCEEEEEECS--SSCCEEEEES
T ss_pred cccCCCcEEEEEEcC--CCCEEEEecC
Confidence 11234456788998 9976555443
No 231
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.75 E-value=0.019 Score=50.64 Aligned_cols=186 Identities=12% Similarity=0.096 Sum_probs=110.8
Q ss_pred CCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE
Q 048181 31 PKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI 110 (310)
Q Consensus 31 ~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV 110 (310)
+.-....++++.++|.++++...++.|..++...+....... ........++++ +++.+++
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~------------------~h~~~v~~~~~~-~~~~~l~ 123 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV------------------GHKSDVMSVDID-KKASMII 123 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------CCSSCEEEEEEC-TTSCEEE
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc------------------cCCCcEEEEEEc-CCCCEEE
Confidence 333456678999999988899899999999987543211110 112345678886 5666655
Q ss_pred E-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCC-----CCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 111 A-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG-----TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 111 a-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~-----~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
+ .....|..+|.++.....+.. .....+.+++.|. ++..+++- ..+|.+..+
T Consensus 124 s~s~D~~i~vwd~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~l~s~-----------------~~d~~i~~w 181 (319)
T 3frx_A 124 SGSRDKTIKVWTIKGQCLATLLG-----HNDWVSQVRVVPNEKADDDSVTIISA-----------------GNDKMVKAW 181 (319)
T ss_dssp EEETTSCEEEEETTSCEEEEECC-----CSSCEEEEEECCC------CCEEEEE-----------------ETTSCEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEEec-----cCCcEEEEEEccCCCCCCCccEEEEE-----------------eCCCEEEEE
Confidence 4 334447777877654443321 1123455666652 12233332 235778888
Q ss_pred cCCCCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEE
Q 048181 185 NPRSSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 185 d~~~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
|..+++..... ..-...+.++++|||+ ++++-...+.|..+++... .... .........+++.+ +|.+.++.
T Consensus 182 d~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~~~~sp--~~~~la~~ 255 (319)
T 3frx_A 182 NLNQFQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAK---KAMYTLSAQDEVFSLAFSP--NRYWLAAA 255 (319)
T ss_dssp ETTTTEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTT---EEEEEEECCSCEEEEEECS--SSSEEEEE
T ss_pred ECCcchhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC---cEEEEecCCCcEEEEEEcC--CCCEEEEE
Confidence 87666544332 2233458999999998 5556667888988887532 2111 12223356688888 88765554
Q ss_pred e
Q 048181 263 I 263 (310)
Q Consensus 263 ~ 263 (310)
.
T Consensus 256 ~ 256 (319)
T 3frx_A 256 T 256 (319)
T ss_dssp E
T ss_pred c
Confidence 3
No 232
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.75 E-value=0.0045 Score=60.15 Aligned_cols=187 Identities=8% Similarity=0.004 Sum_probs=105.3
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCC-ce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPD-GF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
..|..++++|+|+++.+.. .+.|+-++... .. ..+. .....-..+++. ++|+++++
T Consensus 19 g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~--------------------~h~~~v~~~~~s-pdg~~las 76 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYT--------------------EHSHQTTVAKTS-PSGYYCAS 76 (611)
T ss_dssp TCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEEC--------------------CCSSCEEEEEEC-TTSSEEEE
T ss_pred CceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEec--------------------CCCCceEEEEEC-CCCcEEEE
Confidence 4688899999998666665 45787777653 22 2211 112234578897 67776665
Q ss_pred e-CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 112 D-AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 112 d-~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
- ....|...|..+++..... ...+ .-...++++++|+ |+..++-... ....+.++.+|.. ..
T Consensus 77 g~~d~~v~lWd~~~~~~~~~~-~~~~-~~~~v~~v~fs~d-g~~l~~~~~~-------------~~~~~~v~~wd~~-~~ 139 (611)
T 1nr0_A 77 GDVHGNVRIWDTTQTTHILKT-TIPV-FSGPVKDISWDSE-SKRIAAVGEG-------------RERFGHVFLFDTG-TS 139 (611)
T ss_dssp EETTSEEEEEESSSTTCCEEE-EEEC-SSSCEEEEEECTT-SCEEEEEECC-------------SSCSEEEEETTTC-CB
T ss_pred EeCCCCEEEeECCCCcceeeE-eecc-cCCceEEEEECCC-CCEEEEEECC-------------CCceeEEEEeeCC-CC
Confidence 3 3334666776543211110 1111 1124679999995 7665543211 0113567767632 11
Q ss_pred EEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee--eecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 191 VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD--IINFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 191 ~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~--~~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
...+...-...+.++|+|++..++++-+..+.|..++... +... +.+-......+++.+ +|.+.++...
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---~~~~~~l~~H~~~V~~v~fsp--dg~~las~s~ 210 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP---FKFKSTFGEHTKFVHSVRYNP--DGSLFASTGG 210 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT---BEEEEEECCCSSCEEEEEECT--TSSEEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC---CeEeeeeccccCceEEEEECC--CCCEEEEEEC
Confidence 1122223335689999999986677878888888887532 2211 112223456678888 8877665543
No 233
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.73 E-value=0.025 Score=51.44 Aligned_cols=198 Identities=10% Similarity=0.032 Sum_probs=108.3
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCc-eE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDG-FT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA- 111 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa- 111 (310)
...+++|.++|.++.+.. ++.+..++...+ .. .+...... .....................+++. ++|+++++
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~s-~dg~~l~s~ 141 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAA--NKDPENLNTSSSPSSDLYIRSVCFS-PDGKFLATG 141 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------CCCCBEEEEEEC-TTSSEEEEE
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccc--ccccccccccccCCCceeEEEEEEC-CCCCEEEEE
Confidence 456899999999666654 567777775533 22 11100000 0000000000000011124578896 57766554
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
.....|..+|.++++...... + +-...+.++++++ |..+++-. .+|.+..+|..+++.
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~---~-h~~~v~~~~~~p~-~~~l~s~s-----------------~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQ---G-HEQDIYSLDYFPS-GDKLVSGS-----------------GDRTVRIWDLRTGQC 199 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEEC---C-CSSCEEEEEECTT-SSEEEEEE-----------------TTSEEEEEETTTTEE
T ss_pred cCCCeEEEEECCCCcEEEEEc---c-CCCCEEEEEEcCC-CCEEEEec-----------------CCCcEEEEECCCCee
Confidence 334447888988776533222 1 1234578999995 76666543 247788888877765
Q ss_pred EEeecCCCCCceeEEcc-CCCEEEEEecCCCeEEEEEecCCCCCcee-ee-------cCCCCCceeeeCCCCCCcEEEEE
Q 048181 192 TVLLRNLTGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRGPRANSFD-II-------NFQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 192 ~~~~~~l~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~~-------~l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
......-.....++++| +|+ ++++-...+.|..+++.... ... +. +-......+++++ +|.+.++.
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~~h~~~v~~v~~~~--~g~~l~s~ 274 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGF--LVERLDSENESGTGHKDSVYSVVFTR--DGQSVVSG 274 (393)
T ss_dssp EEEEECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCC--EEEEEC------CCCSSCEEEEEECT--TSSEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCCc--EEEeecccccCCCCCCCCEEEEEECC--CCCEEEEE
Confidence 54444334567899999 777 55666677888888865321 111 10 1112345678888 88766554
Q ss_pred e
Q 048181 263 I 263 (310)
Q Consensus 263 ~ 263 (310)
.
T Consensus 275 s 275 (393)
T 1erj_A 275 S 275 (393)
T ss_dssp E
T ss_pred e
Confidence 4
No 234
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.73 E-value=0.011 Score=53.91 Aligned_cols=167 Identities=7% Similarity=0.026 Sum_probs=95.0
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-eEEE
Q 048181 32 KAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-QLYI 110 (310)
Q Consensus 32 ~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~LyV 110 (310)
.-....+++|.++|+++++. .++.|..++.......+...... ...+.........++++ +++ ++++
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~v~~~~~~-p~~~~~l~ 243 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIK----------PANMEELTEVITAAEFH-PNSCNTFV 243 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECC----------CSSGGGCCCCEEEEEEC-SSCTTEEE
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecc----------cccccccCcceEEEEEC-CCCCcEEE
Confidence 33567799999999988887 79999999987222211100000 00011122346688997 555 5555
Q ss_pred E-eCCCcEEEEeCCCCeE-----EEeeccCCC-------ccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCC
Q 048181 111 A-DAYSGLLVVGPNGRLA-----TQLATGAEG-------QAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDS 177 (310)
Q Consensus 111 a-d~~~gi~~id~~~~~~-----~~~~~~~~g-------~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~ 177 (310)
+ .....|..+|..+++. ..+...... ......+.+++++ +|+++++-. .
T Consensus 244 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~-----------------~ 305 (447)
T 3dw8_B 244 YSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRD-----------------Y 305 (447)
T ss_dssp EEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEE-----------------S
T ss_pred EEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEee-----------------C
Confidence 4 4444488888776552 322111000 0011467899999 487766532 1
Q ss_pred CceEEEEcCCC-CeEEEeecCCCC----------------CceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 178 TGRLLSYNPRS-SQVTVLLRNLTG----------------PAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 178 ~G~l~~~d~~~-g~~~~~~~~l~~----------------pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
|.|..+|..+ ++.......-.. ...++|+|+|++| ++-+..+.|+.+++..
T Consensus 306 -~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 306 -LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNT 373 (447)
T ss_dssp -SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTT
T ss_pred -CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCC
Confidence 5677777653 332111111111 1239999999865 6777889999998864
No 235
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.73 E-value=0.0071 Score=54.88 Aligned_cols=155 Identities=11% Similarity=0.104 Sum_probs=96.9
Q ss_pred cceEEEcc-CCCEEEEEeCCCeEEEEECCCc-e--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 36 GESIAFEP-VGGAFYTGVADGRILKYQAPDG-F--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 36 Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
..++++.+ +++++++...++.|.-++.... . ..+. ........+++. ++++.+++
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~--------------------~h~~~v~~v~~~-p~~~~l~s 266 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH--------------------GHEGDINSVKFF-PDGQRFGT 266 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC--------------------CCSSCCCEEEEC-TTSSEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC--------------------CcCCCeEEEEEe-cCCCeEEE
Confidence 34566765 6777888888888888886421 1 1110 112334678997 67777666
Q ss_pred eCCCc-EEEEeCCCCeEEEeeccCC---CccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 112 DAYSG-LLVVGPNGRLATQLATGAE---GQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 112 d~~~g-i~~id~~~~~~~~~~~~~~---g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
-...+ |..+|..+++......... .........+++++ +|++.++-.. +|.++.+|..
T Consensus 267 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~-----------------dg~i~vwd~~ 328 (380)
T 3iz6_a 267 GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYS-----------------NGDCYVWDTL 328 (380)
T ss_dssp ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECT-----------------TSCEEEEETT
T ss_pred EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CCCEEEEEEC-----------------CCCEEEEECC
Confidence 54444 7888988765433222111 11223467899999 4887776543 4778888876
Q ss_pred CCeEEEeec-----CCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 188 SSQVTVLLR-----NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 188 ~g~~~~~~~-----~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+++...... .-..-+.++|+|||+ ++++-+..+.|..+++.+
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECCS
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecCC
Confidence 665433221 123457899999998 456667788888888765
No 236
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.72 E-value=0.019 Score=49.74 Aligned_cols=75 Identities=5% Similarity=-0.080 Sum_probs=45.8
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce---EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF---TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~Ly 109 (310)
....+++|.++|+++++...++.|..++..... ..... +.........+++.+. +++++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~~~~d~~~l 74 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDS-----------------WRAHDSSIVAIDWASPEYGRII 74 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEE-----------------EECCSSCEEEEEECCGGGCSEE
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecce-----------------eccCCCcEEEEEEcCCCCCCEE
Confidence 457789999999988888889999888765321 11110 0112234567888632 36555
Q ss_pred EE-eCCCcEEEEeCCCC
Q 048181 110 IA-DAYSGLLVVGPNGR 125 (310)
Q Consensus 110 Va-d~~~gi~~id~~~~ 125 (310)
++ .....|..+|.+++
T Consensus 75 ~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPD 91 (351)
T ss_dssp EEEETTSCEEEEEECTT
T ss_pred EEEcCCCeEEEEecCCC
Confidence 54 43334666676554
No 237
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.71 E-value=0.019 Score=49.41 Aligned_cols=205 Identities=9% Similarity=-0.052 Sum_probs=109.0
Q ss_pred CCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 30 PPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
.+.-....++++ ++++++++...++.|..++........... ........+++. ++++++
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~------------------~~~~~v~~~~~~-~~~~~l 74 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY------------------TGQGFLNSVCYD-SEKELL 74 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE------------------ECSSCEEEEEEE-TTTTEE
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee------------------cCCccEEEEEEC-CCCCEE
Confidence 333456778999 889888898899999999876543221100 112345688997 556555
Q ss_pred E-EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 I-ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 V-ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
+ +.....+..++..............+ .-.....++++. ..++.+. .+|.+..+|..
T Consensus 75 ~~~~~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~--~~l~~~~------------------~d~~i~~~d~~- 132 (313)
T 3odt_A 75 LFGGKDTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSFQD--GVVISGS------------------WDKTAKVWKEG- 132 (313)
T ss_dssp EEEETTSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEEET--TEEEEEE------------------TTSEEEEEETT-
T ss_pred EEecCCCeEEEEEeeecCCCCcccchhh-cccCEEEEEecC--CEEEEEe------------------CCCCEEEEcCC-
Confidence 4 44443466566443210000011111 112345666642 4444332 24677777732
Q ss_pred CeEEEeecCCCCCceeEEcc-CCCEEEEEecCCCeEEEEEecCCCCCceeeec-CCCCCceeeeCCCCCCcEEEEEecCC
Q 048181 189 SQVTVLLRNLTGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRGPRANSFDIIN-FQAKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 189 g~~~~~~~~l~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~-l~g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
.....+...-.....+++.+ +++. +++-...+.|..++... ....+.. .......+++.+ +|.++++....
T Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~dg- 205 (313)
T 3odt_A 133 SLVYNLQAHNASVWDAKVVSFSENK-FLTASADKTIKLWQNDK---VIKTFSGIHNDVVRHLAVVD--DGHFISCSNDG- 205 (313)
T ss_dssp EEEEEEECCSSCEEEEEEEETTTTE-EEEEETTSCEEEEETTE---EEEEECSSCSSCEEEEEEEE--TTEEEEEETTS-
T ss_pred cEEEecccCCCceeEEEEccCCCCE-EEEEECCCCEEEEecCc---eEEEEeccCcccEEEEEEcC--CCeEEEccCCC-
Confidence 22333333334557888888 7775 45556677888887321 1111122 334466788888 88855554443
Q ss_pred CCCCCCceeeEEECC-CCcEEEEEec
Q 048181 267 QPAGTPVPIGQRISA-FGAVLDTISF 291 (310)
Q Consensus 267 ~~~~~~~~~v~~~~~-~G~~~~~~~~ 291 (310)
.+..+|. +++.+..+..
T Consensus 206 --------~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 206 --------LIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp --------EEEEEETTTCCEEEEEEC
T ss_pred --------eEEEEECCchhhhhhhhc
Confidence 4555553 3555555443
No 238
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.71 E-value=0.022 Score=52.01 Aligned_cols=216 Identities=8% Similarity=0.005 Sum_probs=115.4
Q ss_pred CcceEEEccCC--CEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCC-----c--------------------cc
Q 048181 35 GGESIAFEPVG--GAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGT-----T--------------------NL 87 (310)
Q Consensus 35 ~Pegia~d~~G--~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~-----~--------------------~~ 87 (310)
...+++|.+++ ..+++...++.|.-++...+.......... ..+|. . ..
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLK----EEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC------------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceeccc----CccccccCcccccceEeccccchheeeeccceE
Confidence 46689999997 778888888888877754321110000000 00000 0 00
Q ss_pred c-CCCCCCceeeEEEecCCCeEEEEeCCCcEEEEeCCC-CeEEEeec----cCCCccccCccceEEeCCCC-eEEEEcCC
Q 048181 88 D-LGPICRRTFGLALHYATRQLYIADAYSGLLVVGPNG-RLATQLAT----GAEGQAFHFLDGLDVDQGTG-VVYFTDAS 160 (310)
Q Consensus 88 ~-~~~~~~~P~Gla~d~~~g~LyVad~~~gi~~id~~~-~~~~~~~~----~~~g~~~~~pndvavd~~~G-~lyvtd~~ 160 (310)
. ..........+++. ++++++++.....|..+|... ++...+.. ...+ .-...+.++++|+ | +++++-..
T Consensus 171 ~~~~~h~~~v~~~~~~-~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~-~~~~l~s~~~ 247 (447)
T 3dw8_B 171 IFANAHTYHINSISIN-SDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPN-SCNTFVYSSS 247 (447)
T ss_dssp EECSCCSSCCCEEEEC-TTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSS-CTTEEEEEET
T ss_pred EeccCCCcceEEEEEc-CCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCC-CCcEEEEEeC
Confidence 0 01122334578997 577776665333477788773 22222110 1111 2234678999995 6 66665432
Q ss_pred CccCccceeEeeeecCCCceEEEEcCCCCeE-----EEeecCCC------------CCceeEEccCCCEEEEEecCCCeE
Q 048181 161 GVYDFRTIVKLNITNDSTGRLLSYNPRSSQV-----TVLLRNLT------------GPAGVAISVDSSFLLVSEFTGNRT 223 (310)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~-----~~~~~~l~------------~pnGIa~~~dg~~Lyv~d~~~~~I 223 (310)
+|.|..+|..+++. ..+...-. ..+.++|+|+|++|+.+. . +.|
T Consensus 248 -----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~v 308 (447)
T 3dw8_B 248 -----------------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LSV 308 (447)
T ss_dssp -----------------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SEE
T ss_pred -----------------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-CeE
Confidence 46777777766553 33332221 457999999999666554 4 889
Q ss_pred EEEEecCCCCCceeeecCCCC---------------CceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCC-CcEE
Q 048181 224 LKYWLRGPRANSFDIINFQAK---------------PHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAF-GAVL 286 (310)
Q Consensus 224 ~~~~~~~~~~g~~~~~~l~g~---------------Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~-G~~~ 286 (310)
..+++.....-...+..-... .-.+++++ +|.+.++.... +.+..+|-+ |+.+
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~--~~~~l~s~s~d--------g~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG--SDSVVMTGSYN--------NFFRMFDRNTKRDI 377 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT--TSSEEEEECST--------TEEEEEETTTCCEE
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECC--CCCEEEEeccC--------CEEEEEEcCCCcce
Confidence 988886311111111100000 11288999 99866555443 367778854 5544
No 239
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.67 E-value=0.0051 Score=55.02 Aligned_cols=158 Identities=9% Similarity=0.004 Sum_probs=90.0
Q ss_pred CCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE
Q 048181 33 AFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA 111 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa 111 (310)
-....+++|.++|+++++...++.|..++.... ...+.. +.........+++. ++++++++
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~-----------------~~~h~~~v~~v~~s-p~~~~l~s 122 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT-----------------LEGHENEVKSVAWA-PSGNLLAT 122 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE-----------------ECCCSSCEEEEEEC-TTSSEEEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE-----------------ccCCCCCceEEEEe-CCCCEEEE
Confidence 345678999999998888888888887765532 221110 01122345689997 56666554
Q ss_pred -eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 112 -DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 112 -d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
.....|..+|..++..........+ .-...+.++++|+ |.++++-.. +|.+..+|..+++
T Consensus 123 ~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~-~~~l~s~s~-----------------d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 123 CSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPS-QELLASASY-----------------DDTVKLYREEEDD 183 (345)
T ss_dssp EETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSS-SSCEEEEET-----------------TSCEEEEEEETTE
T ss_pred EECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCC-CCEEEEEeC-----------------CCcEEEEEecCCC
Confidence 4444466666654322111111111 1233568899994 776665432 3455555544443
Q ss_pred EE---EeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEe
Q 048181 191 VT---VLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWL 228 (310)
Q Consensus 191 ~~---~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~ 228 (310)
.. .+...-...+.|+|+|+|++| ++-+..+.|..++.
T Consensus 184 ~~~~~~~~~h~~~v~~l~~sp~g~~l-~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 184 WVCCATLEGHESTVWSLAFDPSGQRL-ASCSDDRTVRIWRQ 223 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEE
T ss_pred EEEEEEecCCCCceEEEEECCCCCEE-EEEeCCCeEEEecc
Confidence 22 222223355899999999854 55556666666654
No 240
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.66 E-value=0.031 Score=50.57 Aligned_cols=84 Identities=8% Similarity=-0.044 Sum_probs=50.9
Q ss_pred CCceEEEEcCCC-C-eEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ec-------CCCCCc
Q 048181 177 STGRLLSYNPRS-S-QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-IN-------FQAKPH 246 (310)
Q Consensus 177 ~~G~l~~~d~~~-g-~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~-------l~g~Pd 246 (310)
.+|.+..+|... + .+..+...-...+.++|+|||+ ++++-+..+.|..+++.... .... .. ......
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSCSCS
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc--EEEEecccccccccccCceE
Confidence 356777777642 2 2233333334568999999998 56677788888888875321 1111 11 011246
Q ss_pred eeeeCCCCCCcEEEEEecC
Q 048181 247 NIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 247 gl~~d~~~dG~l~va~~~~ 265 (310)
.+++.+ +|.+.++....
T Consensus 303 ~~~~s~--~g~~l~~g~~d 319 (380)
T 3iz6_a 303 SVAFSI--SGRLLFAGYSN 319 (380)
T ss_dssp EEEECS--SSSEEEEECTT
T ss_pred EEEECC--CCCEEEEEECC
Confidence 788888 88877665543
No 241
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.65 E-value=0.027 Score=49.60 Aligned_cols=191 Identities=10% Similarity=0.031 Sum_probs=110.1
Q ss_pred CCCCCCCcceEEEccCC-CEEEEEeCCCeEEEEECCCc--eE--EeeeecCCCCccccCCCccccCCCCCCceeeEEEec
Q 048181 29 FPPKAFGGESIAFEPVG-GAFYTGVADGRILKYQAPDG--FT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY 103 (310)
Q Consensus 29 ~~~~~~~Pegia~d~~G-~l~~~d~~~g~I~r~~~~g~--~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~ 103 (310)
+.+.-....++++.+++ +++++...++.|..++..+. .. .+.. +......-..+++.
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~-----------------~~~h~~~v~~~~~s- 74 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRS-----------------FKGHSHIVQDCTLT- 74 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEE-----------------EECCSSCEEEEEEC-
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceE-----------------EeCCcccEEEEEEC-
Confidence 34444556789998864 78888888998887765321 10 0100 00112234578886
Q ss_pred CCCeEEEE-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 104 ATRQLYIA-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 104 ~~g~LyVa-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
++|+++++ .....|..+|.++++...... + +-...+.++++++ +.++++-.. +|.+.
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~~-~~~l~s~s~-----------------D~~i~ 132 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFV---G-HKSDVMSVDIDKK-ASMIISGSR-----------------DKTIK 132 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE---C-CSSCEEEEEECTT-SCEEEEEET-----------------TSCEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEc---c-CCCcEEEEEEcCC-CCEEEEEeC-----------------CCeEE
Confidence 56766554 444447788988776432211 1 1234578899994 777766432 35666
Q ss_pred EEcCCCCeEEEeecCCCCCceeEEccCCC-----EEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCC
Q 048181 183 SYNPRSSQVTVLLRNLTGPAGVAISVDSS-----FLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLL 255 (310)
Q Consensus 183 ~~d~~~g~~~~~~~~l~~pnGIa~~~dg~-----~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~d 255 (310)
.+|.....+..+...-.....+++.|.++ .++++-...+.|..+++.. +.... .+-......+++.+ +
T Consensus 133 vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~~~~h~~~v~~~~~sp--~ 207 (319)
T 3frx_A 133 VWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ---FQIEADFIGHNSNINTLTASP--D 207 (319)
T ss_dssp EEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT---TEEEEEECCCCSCEEEEEECT--T
T ss_pred EEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc---chhheeecCCCCcEEEEEEcC--C
Confidence 67765444444444334456788877432 2566767788888888753 22211 12223346678888 8
Q ss_pred CcEEEEEec
Q 048181 256 QTFWEAAII 264 (310)
Q Consensus 256 G~l~va~~~ 264 (310)
|.+.++...
T Consensus 208 g~~l~s~~~ 216 (319)
T 3frx_A 208 GTLIASAGK 216 (319)
T ss_dssp SSEEEEEET
T ss_pred CCEEEEEeC
Confidence 876665443
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.65 E-value=0.009 Score=59.19 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=51.0
Q ss_pred CceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCC--CCceeeeCCCC
Q 048181 178 TGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQA--KPHNIKRNPGL 254 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g--~Pdgl~~d~~~ 254 (310)
.|.|..+|+.+|++.-....-...+|..++.+++.+|+. +..+.++.++... |+..- ..++. ...-+....
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p~~y~~-- 529 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAAT---GEKLWEAPTGTGVVAAPSTYMV-- 529 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCCEEEEE--
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCC---CceeeeeeCCCCcccCCEEEEe--
Confidence 488999999998764333222224677788888888887 6789999998753 33211 22221 111244446
Q ss_pred CCcEEEEEecC
Q 048181 255 LQTFWEAAIIT 265 (310)
Q Consensus 255 dG~l~va~~~~ 265 (310)
+|..|++....
T Consensus 530 ~G~~~v~~~~G 540 (677)
T 1kb0_A 530 DGRQYVSVAVG 540 (677)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEecc
Confidence 88888876443
No 243
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.65 E-value=0.026 Score=49.27 Aligned_cols=187 Identities=11% Similarity=0.060 Sum_probs=104.0
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-Ee
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-AD 112 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-ad 112 (310)
....+++|.++|+++++...++.|..++........... ........+.+. ..+..++ +.
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~-~~~~~l~s~s 147 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV------------------GHTKDVLSVAFS-SDNRQIVSGS 147 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------CCSSCEEEEEEC-TTSSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec------------------CCCCceeEEEEe-ecCccceeec
Confidence 456789999999988888889999888877544322110 112233345554 4454444 44
Q ss_pred CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 113 AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 113 ~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
....+..+|.......... ..+ .-...+.+++.++. ..++++-. .++.+..+|..+++.
T Consensus 148 ~d~~~~~~d~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~s~~-----------------~d~~i~i~d~~~~~~ 207 (340)
T 4aow_A 148 RDKTIKLWNTLGVCKYTVQ--DES-HSEWVSCVRFSPNSSNPIIVSCG-----------------WDKLVKVWNLANCKL 207 (340)
T ss_dssp TTSCEEEECTTSCEEEEEC--SSS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTTEE
T ss_pred CCCeEEEEEeCCCceEEEE--ecc-ccCcccceEEccCCCCcEEEEEc-----------------CCCEEEEEECCCCce
Confidence 4444667776654332221 111 11234456665531 23444322 246677778776665
Q ss_pred EEeecC-CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 192 TVLLRN-LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 192 ~~~~~~-l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.....+ -...+.|+|+|||++ +++-...+.|..+++... ..............+++.+ ++.+.++...
T Consensus 208 ~~~~~~h~~~v~~~~~s~~~~~-l~s~s~Dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~~~--~~~~~~~~~d 276 (340)
T 4aow_A 208 KTNHIGHTGYLNTVTVSPDGSL-CASGGKDGQAMLWDLNEG--KHLYTLDGGDIINALCFSP--NRYWLCAATG 276 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-EEEEETTCEEEEEETTTT--EEEEEEECSSCEEEEEECS--SSSEEEEEET
T ss_pred eeEecCCCCcEEEEEECCCCCE-EEEEeCCCeEEEEEeccC--ceeeeecCCceEEeeecCC--CCceeeccCC
Confidence 443332 234578999999984 555567788888887532 1111111122345566666 6666555443
No 244
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.65 E-value=0.026 Score=49.27 Aligned_cols=204 Identities=12% Similarity=0.019 Sum_probs=117.5
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEE-eC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIA-DA 113 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVa-d~ 113 (310)
....+++.++++++++...++.|..++...+...... .........+++. +++.++++ ..
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~------------------~~h~~~v~~~~~~-~~~~~l~sgs~ 117 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF------------------EAHPDYIRSIAVH-PTKPYVLSGSD 117 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE------------------ECCSSCEEEEEEC-SSSSEEEEEET
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE------------------eCCCCcEEEEEEc-CCCCEEEEECC
Confidence 3467889999998999999999999997744322111 0122345688997 56665554 44
Q ss_pred CCcEEEEeCCCC-eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 114 YSGLLVVGPNGR-LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 114 ~~gi~~id~~~~-~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
...|...|.+++ ...... .+ +-...+.++++|.++.++++-. .+|.+..+|..++...
T Consensus 118 D~~v~lWd~~~~~~~~~~~---~~-h~~~v~~v~~~p~~~~~l~sgs-----------------~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 118 DLTVKLWNWENNWALEQTF---EG-HEHFVMCVAFNPKDPSTFASGC-----------------LDRTVKVWSLGQSTPN 176 (304)
T ss_dssp TSCEEEEEGGGTTEEEEEE---CC-CCSCEEEEEECTTCTTEEEEEE-----------------TTSEEEEEETTCSSCS
T ss_pred CCeEEEEECCCCcchhhhh---cc-cCCcEEEEEECCCCCCEEEEEe-----------------CCCeEEEEECCCCCcc
Confidence 444777787654 222211 11 1234578899885466666543 2466777776443321
Q ss_pred -Eeec-CCCCCceeEEcc--CCCEEEEEecCCCeEEEEEecCCCCCce-e-eecCCCCCceeeeCCCCCCcEEEEEecCC
Q 048181 193 -VLLR-NLTGPAGVAISV--DSSFLLVSEFTGNRTLKYWLRGPRANSF-D-IINFQAKPHNIKRNPGLLQTFWEAAIITR 266 (310)
Q Consensus 193 -~~~~-~l~~pnGIa~~~--dg~~Lyv~d~~~~~I~~~~~~~~~~g~~-~-~~~l~g~Pdgl~~d~~~dG~l~va~~~~~ 266 (310)
.+.. .-..-+.+++++ +++ ++++-+..+.|..+++.. +.. . +.+-......+++.+ ++.+.++...-+
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~---~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~Dg 250 (304)
T 2ynn_A 177 FTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQT---KSCVATLEGHMSNVSFAVFHP--TLPIIISGSEDG 250 (304)
T ss_dssp EEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTT---TEEEEEEECCSSCEEEEEECS--SSSEEEEEETTS
T ss_pred ceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCC---CccceeeCCCCCCEEEEEECC--CCCEEEEEcCCC
Confidence 1111 112335677765 665 556667788898888753 221 1 122222345678888 887666654432
Q ss_pred CCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 267 QPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 267 ~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
.+..+|. .++.+..+...
T Consensus 251 --------~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 251 --------TLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp --------CEEEEETTTCCEEEEECCS
T ss_pred --------eEEEEECCCCceeeeccCC
Confidence 4666664 46666665543
No 245
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.64 E-value=0.017 Score=50.62 Aligned_cols=154 Identities=10% Similarity=0.003 Sum_probs=92.1
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe--EE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ--LY 109 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~--Ly 109 (310)
....+++|.++|.++++...++.|..++..... ..... ..........+++. ++++ |+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~-~~~~~~l~ 73 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ-----------------SLRYKHPLLCCNFI-DNTDLQIY 73 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEE-----------------EEECSSCEEEEEEE-ESSSEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccccee-----------------eeecCCceEEEEEC-CCCCcEEE
Confidence 456789999999988888889988877754321 11110 00122345688887 4565 55
Q ss_pred EEeCCCcEEEEeC-CCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 110 IADAYSGLLVVGP-NGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 110 Vad~~~gi~~id~-~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
++.....|..++. ++++...+... ..-...+.+++++ +..++.+.. +|.|..+|..+
T Consensus 74 ~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~------------------d~~i~iwd~~~ 131 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSPSFQALTNN---EANLGICRICKYG-DDKLIAASW------------------DGLIEVIDPRN 131 (342)
T ss_dssp EEETTSCEEEECSSSSSSEEECBSC---CCCSCEEEEEEET-TTEEEEEET------------------TSEEEEECHHH
T ss_pred EEcCCCeEEEEEeccCCceEecccc---CCCCceEEEEeCC-CCEEEEEcC------------------CCeEEEEcccc
Confidence 5555555888998 87765444220 0123456888888 455554432 35666666543
Q ss_pred ---------CeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 189 ---------SQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 189 ---------g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
++.......-.....+++++++ + ++-+..+.|..|++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l-~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--L-IVGMNNSQVQWFRLPL 179 (342)
T ss_dssp HTTBCEEEEESCSSSSSSCCCEEEEEECSSE--E-EEEESTTEEEEEESSC
T ss_pred cccccccccCCeeeEEeeCCceEEEEecCCc--E-EEEeCCCeEEEEECCc
Confidence 2211111222356789999876 4 4446678899998865
No 246
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.64 E-value=0.012 Score=51.79 Aligned_cols=193 Identities=7% Similarity=0.003 Sum_probs=106.4
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-E
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-A 111 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-a 111 (310)
....+++|.+ +++++++...++.|..++...+....... ...........++++ ++++.++ +
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------------~~~~~~~~v~~~~~~-~~~~~l~~~ 179 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG---------------GVEGHRDEVLSADYD-LLGEKIMSC 179 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC---------------STTSCSSCEEEEEEC-TTSSEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec---------------ccccccCceeEEEEC-CCCCEEEEe
Confidence 4577899999 88988888889999999987543221110 001223456789997 4565544 4
Q ss_pred eCCCcEEEEeCCCCeEEEeecc-----CCC-------------------ccccCccceEEeCCCCeEEEEcCCCccCccc
Q 048181 112 DAYSGLLVVGPNGRLATQLATG-----AEG-------------------QAFHFLDGLDVDQGTGVVYFTDASGVYDFRT 167 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~-----~~g-------------------~~~~~pndvavd~~~G~lyvtd~~~~~~~~~ 167 (310)
.....|..+|..+++....... .++ ..-...+.++++. . ++++-
T Consensus 180 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~--------- 247 (366)
T 3k26_A 180 GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG--D-LILSK--------- 247 (366)
T ss_dssp ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEET--T-EEEEE---------
T ss_pred cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcC--C-EEEEE---------
Confidence 4444588888776432110000 000 0112234455541 2 33332
Q ss_pred eeEeeeecCCCceEEEEcCCCCe---------------EEEeecCCCCCceeEEccC--CCEEEEEecCCCeEEEEEecC
Q 048181 168 IVKLNITNDSTGRLLSYNPRSSQ---------------VTVLLRNLTGPAGVAISVD--SSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 168 ~~~~~~~~~~~G~l~~~d~~~g~---------------~~~~~~~l~~pnGIa~~~d--g~~Lyv~d~~~~~I~~~~~~~ 230 (310)
..+|.+..+|..+++ +..+...-...+.++++|+ +++| ++-...+.|..+++..
T Consensus 248 --------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l-~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 248 --------SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML-ALGNQVGKLYVWDLEV 318 (366)
T ss_dssp --------CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE-EEECTTSCEEEEECCS
T ss_pred --------ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE-EEEecCCcEEEEECCC
Confidence 224566666644331 1122222334678999999 8854 5557788899999875
Q ss_pred CCCCcee---eecC--CCCCceeeeCCCCCCcEEEEEecC
Q 048181 231 PRANSFD---IINF--QAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 231 ~~~g~~~---~~~l--~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
...-... +..- .+....+++++ +|++.++....
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~~~d 356 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSR--DSSILIAVCDD 356 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECT--TSSEEEEEETT
T ss_pred CCCccccceEEcccccCCceEEEEeCC--CCCeEEEEeCC
Confidence 3211111 1111 23467789998 89877665543
No 247
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.62 E-value=0.015 Score=51.25 Aligned_cols=230 Identities=7% Similarity=-0.037 Sum_probs=111.9
Q ss_pred CCcceEEEcc--CCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEE
Q 048181 34 FGGESIAFEP--VGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLY 109 (310)
Q Consensus 34 ~~Pegia~d~--~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~Ly 109 (310)
....+++|.+ +|+++++...++.|..++...+ ...... +.........+++.+. +|.++
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-----------------~~~h~~~V~~v~~~p~~~g~~l 120 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE-----------------HAGHDSSVNSVCWAPHDYGLIL 120 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE-----------------ECCCSSCCCEEEECCTTTCSCE
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE-----------------ccCCCCceEEEEECCCCCCcEE
Confidence 3456788864 4787888888899888887643 111110 0011223457888633 26555
Q ss_pred EEeCCC-cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC--CeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 110 IADAYS-GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT--GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 110 Vad~~~-gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~--G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
++-... .|..++..++..........+ +....+.++++|+. +.+.-..... . .. ....+.....+|.+..+|.
T Consensus 121 asgs~D~~i~lwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~l~sgs~D~~v~lWd~ 196 (316)
T 3bg1_A 121 ACGSSDGAISLLTYTGEGQWEVKKINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQ-K-PN-YIKRFASGGCDNLIKLWKE 196 (316)
T ss_dssp EEECSSSCEEEEEECSSSCEEECCBTTS-SSSCBCCCEECCCCCC------CCSC-C-CC-CCCBEECCBTTSBCCEEEE
T ss_pred EEEcCCCCEEEEecCCCCCcceeeeecc-ccCCcceEEEccccCCcccccccccc-C-cc-ccceEEEecCCCeEEEEEe
Confidence 554433 366666654321111111122 11234566666631 1111000000 0 00 0000122233455555554
Q ss_pred CCC-eEE---EeecCCCCCceeEEccCC---CEEEEEecCCCeEEEEEecCCCCCc--eee-ecCCCCCceeeeCCCCCC
Q 048181 187 RSS-QVT---VLLRNLTGPAGVAISVDS---SFLLVSEFTGNRTLKYWLRGPRANS--FDI-INFQAKPHNIKRNPGLLQ 256 (310)
Q Consensus 187 ~~g-~~~---~~~~~l~~pnGIa~~~dg---~~Lyv~d~~~~~I~~~~~~~~~~g~--~~~-~~l~g~Pdgl~~d~~~dG 256 (310)
.++ ..+ .+...-..-+.++|+|++ ..++++-+..+.|..+++.....+. ... ....+....+++.+ +|
T Consensus 197 ~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp--~g 274 (316)
T 3bg1_A 197 EEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI--TA 274 (316)
T ss_dssp CTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECT--TT
T ss_pred CCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcC--CC
Confidence 322 111 122222345899999986 2366777788899888876421111 112 23334456789999 99
Q ss_pred cEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecC
Q 048181 257 TFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 257 ~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p 292 (310)
++.++....+ .-.+...+.+|+....-.+.
T Consensus 275 ~~las~~~D~------~v~lw~~~~~g~~~~~~~~~ 304 (316)
T 3bg1_A 275 NILAVSGGDN------KVTLWKESVDGQWVCISDVN 304 (316)
T ss_dssp CCEEEEESSS------CEEEEEECTTSCEEEEEECC
T ss_pred CEEEEEcCCC------eEEEEEECCCCcEEEeeecc
Confidence 8766655432 12344445567655444444
No 248
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.02 Score=50.88 Aligned_cols=143 Identities=10% Similarity=-0.001 Sum_probs=85.4
Q ss_pred ceeeEEEecC--CCeEEE-EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEe
Q 048181 95 RTFGLALHYA--TRQLYI-ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKL 171 (310)
Q Consensus 95 ~P~Gla~d~~--~g~LyV-ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~ 171 (310)
....++++ + ++++++ +.....|..+|..+++...+.... .-...+.++++| +|.++++-..
T Consensus 127 ~v~~~~~~-~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~p-dg~~lasg~~----------- 190 (343)
T 3lrv_A 127 EIIYMYGH-NEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHK-DSLLLALYSP----------- 190 (343)
T ss_dssp CEEEEECC-C---CCEEEEEETTCCEEEEESSSSCEEEEECCC---SSCCCCEEEECT-TSCEEEEECT-----------
T ss_pred CEEEEEcC-CCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---CCCceEEEEECC-CCCEEEEEcC-----------
Confidence 35578886 5 666666 444445888888877653332111 112367899999 4888776432
Q ss_pred eeecCCCceEEEEcCCCCeEE--Eeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecC--CCCC-
Q 048181 172 NITNDSTGRLLSYNPRSSQVT--VLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINF--QAKP- 245 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~~~g~~~--~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l--~g~P- 245 (310)
+|.|..+|..+++.. .+.. .-...+.|+|+|+|++|+.+. .+.|..+++..... ...+..+ ...+
T Consensus 191 ------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~-~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 191 ------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVG-TLAYPTYTIPEFKT 261 (343)
T ss_dssp ------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTT-CBSSCCCBC-----
T ss_pred ------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCc-ceeecccccccccc
Confidence 467888887766543 2222 234568999999998776665 33888888864311 1111111 1123
Q ss_pred --ceeeeCCCCCCcEEEEEec
Q 048181 246 --HNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 246 --dgl~~d~~~dG~l~va~~~ 264 (310)
..+++++ +|.+.++...
T Consensus 262 ~~~~~~~~~--~g~~l~~~s~ 280 (343)
T 3lrv_A 262 GTVTYDIDD--SGKNMIAYSN 280 (343)
T ss_dssp CCEEEEECT--TSSEEEEEET
T ss_pred cceEEEECC--CCCEEEEecC
Confidence 2499999 9987777544
No 249
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.60 E-value=0.0012 Score=58.41 Aligned_cols=151 Identities=11% Similarity=0.047 Sum_probs=86.4
Q ss_pred EccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEec---CCCeEEEEeCCCcE
Q 048181 41 FEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY---ATRQLYIADAYSGL 117 (310)
Q Consensus 41 ~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~---~~g~LyVad~~~gi 117 (310)
+.++++++++...++.|..++.......... ........+++++ ....|+++.....|
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWET-------------------NIKNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEE-------------------ECSSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeec-------------------CCCCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 5688998888888999999998755432110 1123456788864 33445445444447
Q ss_pred EEEeCCCCeEE-Eee-ccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC-----
Q 048181 118 LVVGPNGRLAT-QLA-TGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS----- 189 (310)
Q Consensus 118 ~~id~~~~~~~-~~~-~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g----- 189 (310)
..+|..+++.. .+. ....+ .-...+.++++|+ |. ++++-.. +|.+..+|..++
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKA-HKSTVWQVRHLPQ-NRELFLTAGG-----------------AGGLHLWKYEYPIQRSK 297 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEEC-CSSCEEEEEEETT-EEEEEEEEET-----------------TSEEEEEEEECCSCC--
T ss_pred EEEeCcCCCcccceeeeccCC-CcCCEEEEEECCC-CCcEEEEEeC-----------------CCcEEEeecCCCccccc
Confidence 77776543210 110 00001 1234678999994 76 5555332 244444443211
Q ss_pred ---------------eEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 190 ---------------QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 190 ---------------~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
.+..+...-.....++|+|+|+.|+++-...+.|..+++.
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 1112222233457999999999777677888899988875
No 250
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.56 E-value=0.043 Score=53.14 Aligned_cols=208 Identities=12% Similarity=0.111 Sum_probs=113.4
Q ss_pred CCCCCCcceEEEccCCC-EEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 30 PPKAFGGESIAFEPVGG-AFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 30 ~~~~~~Pegia~d~~G~-l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
.+.-....+++|.|++. ++++...++.|.-++......... +.........+++. ++|++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~------------------l~~H~~~V~~v~fs-pdg~~ 204 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST------------------FGEHTKFVHSVRYN-PDGSL 204 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEE------------------ECCCSSCEEEEEEC-TTSSE
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeee------------------eccccCceEEEEEC-CCCCE
Confidence 33334567899999986 577788889998888654321111 01122345689997 67877
Q ss_pred EEEeCC-CcEEEEeCCCCeEEEeecc--CCC-ccccCccceEEeCCCCeEEEEcCCCc----cCccc--eeE--------
Q 048181 109 YIADAY-SGLLVVGPNGRLATQLATG--AEG-QAFHFLDGLDVDQGTGVVYFTDASGV----YDFRT--IVK-------- 170 (310)
Q Consensus 109 yVad~~-~gi~~id~~~~~~~~~~~~--~~g-~~~~~pndvavd~~~G~lyvtd~~~~----~~~~~--~~~-------- 170 (310)
+++-.. ..|..+|..+++....... ... .+-...+.++++|+ |+.++|-.... ++... ...
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 665433 4477788766554322211 000 12235678999994 77666643321 11100 000
Q ss_pred ------------eeeecCCCceEEEEcCCCCeEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee
Q 048181 171 ------------LNITNDSTGRLLSYNPRSSQVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD 237 (310)
Q Consensus 171 ------------~~~~~~~~G~l~~~d~~~g~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~ 237 (310)
.+.....+|.+..+|..+++..... ..-...+.++|+|||++|+ +-...+.|+.+++... ...
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~-s~s~D~~v~~Wd~~~~---~~~ 359 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLF-SADAEGHINSWDISTG---ISN 359 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTC---CEE
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEE-EEeCCCcEEEEECCCC---cee
Confidence 0112223556666666655433322 2233457899999998654 5556778888887532 211
Q ss_pred -e--ecCCCCCceeeeCCCCCCcEEEEEe
Q 048181 238 -I--INFQAKPHNIKRNPGLLQTFWEAAI 263 (310)
Q Consensus 238 -~--~~l~g~Pdgl~~d~~~dG~l~va~~ 263 (310)
. ..-......+++.+ +|.+..+..
T Consensus 360 ~~~~~~h~~~v~~~~~s~--~~~l~s~s~ 386 (611)
T 1nr0_A 360 RVFPDVHATMITGIKTTS--KGDLFTVSW 386 (611)
T ss_dssp ECSSCSCSSCEEEEEECT--TSCEEEEET
T ss_pred eecccCCcceEEEEEECC--CCcEEEEEc
Confidence 1 11122345566766 666655543
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.56 E-value=0.016 Score=56.23 Aligned_cols=83 Identities=2% Similarity=-0.051 Sum_probs=48.7
Q ss_pred CCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCC--ceeeeCCC
Q 048181 177 STGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKP--HNIKRNPG 253 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~P--dgl~~d~~ 253 (310)
..|.|+.+|+.+|++.--...-....+..+...++.+|+. +..+.|+.++... |+..- ..++... .-+....
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g-~~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p~~~~~- 516 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYA-TLDGYLKALDNKD---GKELWNFKMPSGGIGSPMTYSF- 516 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCCEEEEE-
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEE-cCCCeEEEEECCC---CCEEEEEeCCCCcEeeeEEEEE-
Confidence 4589999999988764333222223455555455678885 5678899998642 33211 1222111 1134335
Q ss_pred CCCcEEEEEecC
Q 048181 254 LLQTFWEAAIIT 265 (310)
Q Consensus 254 ~dG~l~va~~~~ 265 (310)
+|.+||+....
T Consensus 517 -~G~~yv~~~~G 527 (571)
T 2ad6_A 517 -KGKQYIGSMYG 527 (571)
T ss_dssp -TTEEEEEEEEC
T ss_pred -CCEEEEEEECC
Confidence 78999998765
No 252
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.0099 Score=59.39 Aligned_cols=190 Identities=8% Similarity=0.046 Sum_probs=106.1
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE-
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI- 110 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV- 110 (310)
....+++|.++|.++++...+|.|..++..+. ...... +.........+++.+. ++++++
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~-----------------l~~h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT-----------------LTGHEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEE-----------------ECCCSSCEEEEEECCTTSCSEEEE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCcccee-----------------ccCCcCceEEEEecCCCCCCEEEE
Confidence 34667889999998888888999888876532 221110 0112233457888532 155554
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
+.....|..+|..+++...+... .+ .-.....++++|+. |+++++-. .+|.+..+|..++
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~-~~-h~~~V~~v~~sp~~~~~~l~sgs-----------------~dg~I~vwdl~~~ 133 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVH-AV-HSASVNSVQWAPHEYGPLLLVAS-----------------SDGKVSVVEFKEN 133 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEECCSS
T ss_pred EeCCCeEEEEECCCCcccccccc-cC-CCCCeEEEEECCCCCCCEEEEEe-----------------CCCcEEEEEeecC
Confidence 44444477777776653222211 11 12345788898831 55555432 2467777776544
Q ss_pred e---EEEeecCCCCCceeEEcc-------------CCCEEEEEecCCCeEEEEEecCCCCCceee-e---cCCCCCceee
Q 048181 190 Q---VTVLLRNLTGPAGVAISV-------------DSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I---NFQAKPHNIK 249 (310)
Q Consensus 190 ~---~~~~~~~l~~pnGIa~~~-------------dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~---~l~g~Pdgl~ 249 (310)
. .......-.....++++| |++ ++++-+..+.|..+++.... ..... . .-.+....++
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~-~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEEEE
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCc-ccceeeeeecCCCCcEEEEE
Confidence 1 222223333457889998 576 45555667888888886432 11111 1 1123356677
Q ss_pred eCCCCC---CcEEEEEe
Q 048181 250 RNPGLL---QTFWEAAI 263 (310)
Q Consensus 250 ~d~~~d---G~l~va~~ 263 (310)
+.+ + |++.++..
T Consensus 212 ~sp--~~~~~~~l~s~s 226 (753)
T 3jro_A 212 WSP--TVLLRSYLASVS 226 (753)
T ss_dssp ECC--CCSSSEEEEEEE
T ss_pred ecc--CCCCCCEEEEEe
Confidence 777 7 66555543
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.54 E-value=0.0074 Score=59.68 Aligned_cols=80 Identities=14% Similarity=0.137 Sum_probs=49.4
Q ss_pred CceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee----e-ecCCCCCceeeeCC
Q 048181 178 TGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD----I-INFQAKPHNIKRNP 252 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~----~-~~l~g~Pdgl~~d~ 252 (310)
.|.|+.+|+.+|++.-........++.++...|+.||+. +..+.|+.++... |+.. + .++...| +....
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~t---G~~l~~~~~~~~~~~~p--~~~~~ 510 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADK---GEALWQFEAQSGIVAAP--MTFEL 510 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCC--EEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhc---ChhheEecCCCCcccCc--eEEEE
Confidence 488999999999764322222233566666677778887 6788999998752 3321 1 1222223 44445
Q ss_pred CCCCcEEEEEecC
Q 048181 253 GLLQTFWEAAIIT 265 (310)
Q Consensus 253 ~~dG~l~va~~~~ 265 (310)
+|.+||+...+
T Consensus 511 --~G~~yva~~~G 521 (668)
T 1kv9_A 511 --AGRQYVAIMAG 521 (668)
T ss_dssp --TTEEEEEEEEC
T ss_pred --CCEEEEEEEec
Confidence 78999886543
No 254
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.54 E-value=0.041 Score=48.84 Aligned_cols=155 Identities=12% Similarity=0.033 Sum_probs=85.6
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-------
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR------- 106 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g------- 106 (310)
....+++|.++|+.+++...++.|.-++..+...... . ...........+++. +.+
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~-~---------------~~~~~~~~v~~~~~~-~~~~~~~~~~ 181 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSS-A---------------EKENHSDWVSCVRYS-PIMKSANKVQ 181 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEEC-C---------------TTTSCSSCEEEEEEC-CCCCSCSCCC
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeee-e---------------cccCCCceeeeeeec-cccccccccC
Confidence 3466889999999888888889888888764322110 0 000111223455664 332
Q ss_pred ---eEEE-EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 107 ---QLYI-ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 107 ---~LyV-ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
.+++ +.....|..+|........+ .. .-...+.++++| +|+.+++-.. +|.|.
T Consensus 182 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~----h~~~v~~~~~s~-~g~~l~sgs~-----------------dg~v~ 238 (343)
T 2xzm_R 182 PFAPYFASVGWDGRLKVWNTNFQIRYTF-KA----HESNVNHLSISP-NGKYIATGGK-----------------DKKLL 238 (343)
T ss_dssp SSCCEEEEEETTSEEEEEETTTEEEEEE-EC----CSSCEEEEEECT-TSSEEEEEET-----------------TCEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCceeEEE-cC----ccccceEEEECC-CCCEEEEEcC-----------------CCeEE
Confidence 3444 33334466677543222222 11 123467899999 4877766432 46777
Q ss_pred EEcCC-CCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 183 SYNPR-SSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 183 ~~d~~-~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.+|.. ..........-...+.++|+|++..|.++ ..+.|..+++..
T Consensus 239 iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~--~d~~v~iw~~~~ 285 (343)
T 2xzm_R 239 IWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG--TDQGVKIFNLMT 285 (343)
T ss_dssp EEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE--ESSCEEEEESSS
T ss_pred EEECCCCcccceeecCCCcEEEEEECCCCCEEEEE--CCCCEEEEEeCC
Confidence 77762 22221112122346899999999855443 345577777653
No 255
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.53 E-value=0.039 Score=48.40 Aligned_cols=80 Identities=14% Similarity=0.057 Sum_probs=50.7
Q ss_pred CCCCCcceEEEccC---CCEEEEEeCCCeEEEEECCC-ceEE-eeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 31 PKAFGGESIAFEPV---GGAFYTGVADGRILKYQAPD-GFTD-FAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 31 ~~~~~Pegia~d~~---G~l~~~d~~~g~I~r~~~~g-~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
+.-....+++|.++ |+++++...++.|..++... +... ... .........+++. ++
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~------------------~~h~~~v~~~~~~-~~ 97 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ------------------QMHTGPVLDVCWS-DD 97 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE------------------EECSSCEEEEEEC-TT
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe------------------ccccCCEEEEEEC-cC
Confidence 33356678999998 68888888899988888663 2221 110 0112345688997 56
Q ss_pred CeEEE-EeCCCcEEEEeCCCCeEEE
Q 048181 106 RQLYI-ADAYSGLLVVGPNGRLATQ 129 (310)
Q Consensus 106 g~LyV-ad~~~gi~~id~~~~~~~~ 129 (310)
++.++ +.....|..+|.++++...
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCcee
Confidence 65444 4444448888888776544
No 256
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.53 E-value=0.025 Score=49.91 Aligned_cols=149 Identities=7% Similarity=-0.022 Sum_probs=85.7
Q ss_pred CcceEEEccCCC-EEEEEeC----CCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC-e
Q 048181 35 GGESIAFEPVGG-AFYTGVA----DGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR-Q 107 (310)
Q Consensus 35 ~Pegia~d~~G~-l~~~d~~----~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g-~ 107 (310)
....++|.|||+ ++|+... ..+|+.++.+++. ..+.. ... ...+++. ++| .
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~--------------------~~~-~~~~~ws-pdg~~ 117 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE--------------------AKN-IRSLEWN-EDSRK 117 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE--------------------ESE-EEEEEEC-TTSSE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc--------------------CCC-ccceeEC-CCCCE
Confidence 456789999996 5555543 2358888877543 22210 011 4567786 455 4
Q ss_pred EEEEeC---------------------------CCcEEEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCeEEEEcC
Q 048181 108 LYIADA---------------------------YSGLLVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDA 159 (310)
Q Consensus 108 LyVad~---------------------------~~gi~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~ 159 (310)
|+++.. ...|+.++.++++. +.+.. + ....++++++ | ++++-.
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spd-g-~~~~~~ 188 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRD-K-IVVNVP 188 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETT-E-EEEEEE
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCC-e-EEEEEe
Confidence 655431 13488999988876 54432 1 3567899994 7 655432
Q ss_pred CCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecC-------CCeEEEEE
Q 048181 160 SGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFT-------GNRTLKYW 227 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~-------~~~I~~~~ 227 (310)
...-.. ...+...|+.+| +++.+.+... ... ..++|||++|+++... ..+|+.++
T Consensus 189 ~~~~~~--------~~~~~~~l~~~d--~~~~~~l~~~--~~~-~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 189 HREIIP--------QYFKFWDIYIWE--DGKEEKMFEK--VSF-YAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CCCSSC--------CSSCCEEEEEEE--TTEEEEEEEE--ESE-EEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccc--------cccccccEEEeC--CCceEEeccC--cce-eeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 110000 000134788898 5776666554 222 2349999988766532 35788887
No 257
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.52 E-value=0.02 Score=56.65 Aligned_cols=154 Identities=14% Similarity=0.040 Sum_probs=81.9
Q ss_pred eeeEEEecCCCe-EEEEeC-----CCcEEEEeCCC------C--eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCC
Q 048181 96 TFGLALHYATRQ-LYIADA-----YSGLLVVGPNG------R--LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASG 161 (310)
Q Consensus 96 P~Gla~d~~~g~-LyVad~-----~~gi~~id~~~------~--~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~ 161 (310)
..++++. ++|+ |+++.. ...|+.+|.++ + ..+.+...... .--.++++++.||+.....
T Consensus 235 ~~~~~~S-pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~------~~~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 235 MGGAELS-DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG------EYDYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp EEEEEEC-TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS------CEEEEEEETTEEEEEECTT
T ss_pred EEEEEEc-CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc------EEEEEeccCCEEEEEECCC
Confidence 4578886 5554 554432 23588888765 4 34444322211 1123555456787764321
Q ss_pred ccCccceeEeeeecCCCceEEEEcCCCCe---EEEeecCCC--CCceeEEccCCCEEEEEecCCC--eEEEEEecCCCCC
Q 048181 162 VYDFRTIVKLNITNDSTGRLLSYNPRSSQ---VTVLLRNLT--GPAGVAISVDSSFLLVSEFTGN--RTLKYWLRGPRAN 234 (310)
Q Consensus 162 ~~~~~~~~~~~~~~~~~G~l~~~d~~~g~---~~~~~~~l~--~pnGIa~~~dg~~Lyv~d~~~~--~I~~~~~~~~~~g 234 (310)
.++++|+.+|.+++. .+.+..... ...++++++++ .|+++....+ +|+++++.. |
T Consensus 308 --------------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~---g 369 (710)
T 2xdw_A 308 --------------SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLAT---G 369 (710)
T ss_dssp --------------CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTT---C
T ss_pred --------------CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCC---C
Confidence 235789999987653 244443322 34678888554 5777665544 678887632 2
Q ss_pred c-eeeecC-CCCCceeeeCCCCCC-cEEEEEecCCCCCCCCceeeEEECC
Q 048181 235 S-FDIINF-QAKPHNIKRNPGLLQ-TFWEAAIITRQPAGTPVPIGQRISA 281 (310)
Q Consensus 235 ~-~~~~~l-~g~Pdgl~~d~~~dG-~l~va~~~~~~~~~~~~~~v~~~~~ 281 (310)
. .+...+ .+...++.+++ +| .++++..+...| +.+.++|.
T Consensus 370 ~~~~~l~~~~~~v~~~~~s~--d~~~l~~~~ss~~~P-----~~i~~~d~ 412 (710)
T 2xdw_A 370 ALLKIFPLEVGSVVGYSGQK--KDTEIFYQFTSFLSP-----GIIYHCDL 412 (710)
T ss_dssp CEEEEECCCSSEEEEEECCT--TCSEEEEEEECSSCC-----CEEEEEET
T ss_pred CEEEecCCCCceEEEEecCC--CCCEEEEEEeCCCCC-----CEEEEEEC
Confidence 2 111112 23344566666 66 456554443322 34555554
No 258
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.50 E-value=0.022 Score=56.39 Aligned_cols=124 Identities=11% Similarity=0.130 Sum_probs=68.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCC-CceeeEEEecCCCeEEEEeCCCcEEEEeC
Q 048181 44 VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPIC-RRTFGLALHYATRQLYIADAYSGLLVVGP 122 (310)
Q Consensus 44 ~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~P~Gla~d~~~g~LyVad~~~gi~~id~ 122 (310)
+|. +|+...+++|+.++...+.+.+.......... .. ...+ ....+++++ +++||+......|+.+|.
T Consensus 77 ~g~-vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~-------~~-~~~~~~~~~~~a~~--~~~v~v~~~dg~l~alD~ 145 (677)
T 1kb0_A 77 DGI-MYVSASWSVVHAIDTRTGNRIWTYDPQIDRST-------GF-KGCCDVVNRGVALW--KGKVYVGAWDGRLIALDA 145 (677)
T ss_dssp TTE-EEEECGGGCEEEEETTTTEEEEEECCCCCGGG-------GG-GSSSCSCCCCCEEE--TTEEEEECTTSEEEEEET
T ss_pred CCE-EEEECCCCeEEEEECCCCcEEEEEcCCCCccc-------cc-cccccCCCCCceEE--CCEEEEEcCCCEEEEEEC
Confidence 455 55555678999999886666654321110000 00 0000 112367775 789999876667999999
Q ss_pred CCCeEEEeeccC-CCc-cccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 123 NGRLATQLATGA-EGQ-AFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 123 ~~~~~~~~~~~~-~g~-~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
++|+...-.... +.. ........++. ++.+|+...... ...+|.|+.+|..+|+..
T Consensus 146 ~tG~~~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~------------~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 146 ATGKEVWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAE------------YGVRGYITAYDAETGERK 203 (677)
T ss_dssp TTCCEEEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTT------------TCCBCEEEEEETTTCCEE
T ss_pred CCCCEEeeecCCcCcCcCcccccCcEEE--CCEEEEEecccc------------cCCCCEEEEEECCCCcEE
Confidence 888754222211 100 01111223444 489999765321 113578888998888764
No 259
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.50 E-value=0.05 Score=53.44 Aligned_cols=157 Identities=11% Similarity=0.015 Sum_probs=95.0
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC--e-EEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR--Q-LYI 110 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g--~-LyV 110 (310)
....+++|.++|+.+++...++.|..++..+........ . ..........+++. +++ . |+.
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~---------~------~~~h~~~v~~~~~~-~~~~~~~l~s 536 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE---------G------GEGHRDWVSCVRFS-PNTLQPTIVS 536 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS---------S------TTSCSSCEEEEEEC-SCSSSCEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc---------C------CCCCCCcEEEEEEe-CCCCcceEEE
Confidence 346688899998888888888888888765432211100 0 00112234577886 343 3 443
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
+.....|..+|..+++...... + +-...+.+++++ +|+++++-.. +|.|..+|..+++
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~~~---~-h~~~v~~v~~sp-dg~~l~sg~~-----------------Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRSTLA---G-HTGYVSTVAVSP-DGSLCASGGK-----------------DGVVLLWDLAEGK 594 (694)
T ss_dssp EETTSCEEEEETTTCCEEEEEC---C-CSSCEEEEEECT-TSSEEEEEET-----------------TSBCEEEETTTTE
T ss_pred EeCCCeEEEEECCCCcEEEEEc---C-CCCCEEEEEEeC-CCCEEEEEeC-----------------CCeEEEEECCCCc
Confidence 4444458888887765432221 1 223467899999 4887776432 4677777877665
Q ss_pred EEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 191 VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 191 ~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.......-...+.++|+|++..|..+ ..+.|..+++..
T Consensus 595 ~~~~~~~~~~v~~~~~sp~~~~l~~~--~~~~i~iwd~~~ 632 (694)
T 3dm0_A 595 KLYSLEANSVIHALCFSPNRYWLCAA--TEHGIKIWDLES 632 (694)
T ss_dssp EEECCBCSSCEEEEEECSSSSEEEEE--ETTEEEEEETTT
T ss_pred eEEEecCCCcEEEEEEcCCCcEEEEE--cCCCEEEEECCC
Confidence 44333333456889999998755443 345577777753
No 260
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.48 E-value=0.032 Score=55.46 Aligned_cols=173 Identities=10% Similarity=-0.022 Sum_probs=86.3
Q ss_pred ceEEEccCCCEEEEEeCC---------CeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 37 ESIAFEPVGGAFYTGVAD---------GRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 37 egia~d~~G~l~~~d~~~---------g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
.+++|.|||+.++..... +.++.++..++.... +......-...++. ++|+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-------------------l~~~~~~~~~~~~S-PdG~ 124 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-------------------EERIPNNTQWVTWS-PVGH 124 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-------------------SSCCCTTEEEEEEC-SSTT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-------------------cccCCCcceeeEEC-CCCC
Confidence 458899999855444332 456667766543210 11111233456776 4554
Q ss_pred -EEEEeCCCcEEEEeCCCCeEEEeeccCC------Ccc--------ccCccceEEeCCCCe-EEEE--cCCCc--cCc--
Q 048181 108 -LYIADAYSGLLVVGPNGRLATQLATGAE------GQA--------FHFLDGLDVDQGTGV-VYFT--DASGV--YDF-- 165 (310)
Q Consensus 108 -LyVad~~~gi~~id~~~~~~~~~~~~~~------g~~--------~~~pndvavd~~~G~-lyvt--d~~~~--~~~-- 165 (310)
|..+ ....|+..+.++++.+.+..... |.+ +.....++.+|+ |+ |.++ |.... +..
T Consensus 125 ~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD-g~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 125 KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEECTTCCEEEEEE
T ss_pred EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCC-CCEEEEEEEcccCCceEEEEe
Confidence 4333 23458888887776655432110 000 223346889995 65 5543 21110 000
Q ss_pred ---c----ceeEee---eec--CCCceEEEEcCCC---C---eEEEeec------CCCCCceeEEccCCCEEEEEec-CC
Q 048181 166 ---R----TIVKLN---ITN--DSTGRLLSYNPRS---S---QVTVLLR------NLTGPAGVAISVDSSFLLVSEF-TG 220 (310)
Q Consensus 166 ---~----~~~~~~---~~~--~~~G~l~~~d~~~---g---~~~~~~~------~l~~pnGIa~~~dg~~Lyv~d~-~~ 220 (310)
. .....+ ... .+..+|+.+|.++ + +...+.. .-..-..++|+|||+.+++... ..
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 0 000000 001 1223688899887 6 4444332 2223457899999984443322 22
Q ss_pred --CeEEEEEecCC
Q 048181 221 --NRTLKYWLRGP 231 (310)
Q Consensus 221 --~~I~~~~~~~~ 231 (310)
.+|+.+++++.
T Consensus 283 ~~~~i~~~d~~tg 295 (740)
T 4a5s_A 283 NYSVMDICDYDES 295 (740)
T ss_dssp TEEEEEEEEEETT
T ss_pred CEEEEEEEECCCC
Confidence 36888888753
No 261
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.47 E-value=0.053 Score=48.42 Aligned_cols=155 Identities=13% Similarity=0.119 Sum_probs=88.9
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC--CCeEEE
Q 048181 34 FGGESIAFEP-VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA--TRQLYI 110 (310)
Q Consensus 34 ~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~--~g~LyV 110 (310)
....+++|.+ +++++++...++.|..++...+...... ........+++.+. ++.+++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF-------------------NFEETVYSHHMSPVSTKHCLVA 160 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE-------------------ECSSCEEEEEECSSCSSCCEEE
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec-------------------cCCCceeeeEeecCCCCCcEEE
Confidence 4567899998 6778888888999999998754332111 01123345666421 333444
Q ss_pred -EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 111 -ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 111 -ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
+.....|..+|..+++....... .-...+.++++++ +. ++++-.. +|.+..+|..+
T Consensus 161 ~~~~~~~v~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~ll~~~~~-----------------dg~i~i~d~~~ 218 (408)
T 4a11_B 161 VGTRGPKVQLCDLKSGSCSHILQG----HRQEILAVSWSPR-YDYILATASA-----------------DSRVKLWDVRR 218 (408)
T ss_dssp EEESSSSEEEEESSSSCCCEEECC----CCSCEEEEEECSS-CTTEEEEEET-----------------TSCEEEEETTC
T ss_pred EEcCCCeEEEEeCCCcceeeeecC----CCCcEEEEEECCC-CCcEEEEEcC-----------------CCcEEEEECCC
Confidence 44444588888876543222111 1123568889985 55 5544322 35566666543
Q ss_pred Ce--EEEe---------------ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 189 SQ--VTVL---------------LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 189 g~--~~~~---------------~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+. ...+ ...-.....++++|++++|+ +-...+.|..+++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL-TVGTDNRMRLWNSSN 276 (408)
T ss_dssp SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTT
T ss_pred CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE-EecCCCeEEEEECCC
Confidence 32 1111 11122457899999998655 445677888888764
No 262
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.47 E-value=0.02 Score=56.84 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=50.2
Q ss_pred CceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCC----CCCceeeeCC
Q 048181 178 TGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQ----AKPHNIKRNP 252 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~----g~Pdgl~~d~ 252 (310)
+|.|..+|+.+|++.-....-...++-.++..|..+|+. +..+.|+.|+... |+..- ..++ +.| ++...
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p--~ty~~ 527 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADT---GEKLWEQPAASGVMAAP--VTYSV 527 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCC--EEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCC---CccceeeeCCCCcccCc--eEEEE
Confidence 388999999999764332211112444666677777776 6788999998753 33211 2222 334 66666
Q ss_pred CCCCcEEEEEecC
Q 048181 253 GLLQTFWEAAIIT 265 (310)
Q Consensus 253 ~~dG~l~va~~~~ 265 (310)
+|..||+...+
T Consensus 528 --~G~qyv~~~~G 538 (689)
T 1yiq_A 528 --DGEQYVTFMAG 538 (689)
T ss_dssp --TTEEEEEEEEC
T ss_pred --CCEEEEEEEec
Confidence 89999997654
No 263
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.092 Score=50.83 Aligned_cols=168 Identities=11% Similarity=0.038 Sum_probs=92.6
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce---------EEeeeecCCC---Cccc--cCCCccccCCCCCCceeeE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF---------TDFAFTTPTR---SKAV--CDGTTNLDLGPICRRTFGL 99 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~---------~~~~~~~~~~---~~~~--~~g~~~~~~~~~~~~P~Gl 99 (310)
.+-.+++|.|||.++.+...++.|. ++.... ..+++. |.+ .+.. .++........ ......+
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~Fs-Pdg~~~~~~~~~~~~~~~~~~~~-~~~V~~v 91 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEF-PLEFENKLDFELAQQNGLLNSQP-VCYPRVC 91 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEE-CCCCCCTTTTSCCCSSCSSTTSC-SCCEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEEC-CCCCcceEEEEeCCCceEeecCC-CCcEEEE
Confidence 4678999999999888877788875 322100 011110 000 0000 01100111111 3345688
Q ss_pred EEecCCCeEE-EEeCCCcEEEEeCCCCeEEEeeccCCCcc--ccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecC
Q 048181 100 ALHYATRQLY-IADAYSGLLVVGPNGRLATQLATGAEGQA--FHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITND 176 (310)
Q Consensus 100 a~d~~~g~Ly-Vad~~~gi~~id~~~~~~~~~~~~~~g~~--~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~ 176 (310)
++. ++|..+ ++.....+..++.++ ....+. ...+ -...+.++++|+ |++.++-.
T Consensus 92 awS-PdG~~LAs~s~dg~V~iwd~~~-~l~~l~---~~~~~~~~sv~svafSPD-G~~LAsgs----------------- 148 (588)
T 2j04_A 92 KPS-PIDDWMAVLSNNGNVSVFKDNK-MLTNLD---SKGNLSSRTYHCFEWNPI-ESSIVVGN----------------- 148 (588)
T ss_dssp EEC-SSSSCEEEEETTSCEEEEETTE-EEEECC---CSSCSTTTCEEEEEECSS-SSCEEEEE-----------------
T ss_pred EEC-CCCCEEEEEeCCCcEEEEeCCc-eeeecc---CCCccccccEEEEEEcCC-CCEEEEEc-----------------
Confidence 997 566644 455444577777554 322221 1110 123578999995 76655532
Q ss_pred CCceEEEEcCCCCe--------EEEee----cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCC
Q 048181 177 STGRLLSYNPRSSQ--------VTVLL----RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGP 231 (310)
Q Consensus 177 ~~G~l~~~d~~~g~--------~~~~~----~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~ 231 (310)
.+|.|..+|..++. +..+. +....-..++|+||| +++-...+.|+.+++++.
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSS
T ss_pred CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCC
Confidence 24777777877663 23332 112366899999998 456666888888888764
No 264
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.45 E-value=0.018 Score=50.61 Aligned_cols=204 Identities=6% Similarity=-0.105 Sum_probs=107.5
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEE--ecCCCeEEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL--HYATRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~--d~~~g~LyVa 111 (310)
....+++|.++++++++...++.|..++...+...... ........+++ + .+++++++
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------------------~~~~~v~~~~~~~~-~~~~~l~~ 146 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA-------------------QHDAPVKTIHWIKA-PNYSCVMT 146 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECSSCEEEEEEEEC-SSCEEEEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec-------------------cccCceEEEEEEeC-CCCCEEEE
Confidence 45678999999998888888999999998754322110 11234557777 5 56665544
Q ss_pred -eCCCcEEEEeCCCCeE-EEeeccCCC--ccccCccceEEeCCCCeEEEEcCCCccCc----------c-ce--------
Q 048181 112 -DAYSGLLVVGPNGRLA-TQLATGAEG--QAFHFLDGLDVDQGTGVVYFTDASGVYDF----------R-TI-------- 168 (310)
Q Consensus 112 -d~~~gi~~id~~~~~~-~~~~~~~~g--~~~~~pndvavd~~~G~lyvtd~~~~~~~----------~-~~-------- 168 (310)
.....|..+|..+++. ..+...... .....+.-+.... ++.+++-|....... . ..
T Consensus 147 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (368)
T 3mmy_A 147 GSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA-ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQ 225 (368)
T ss_dssp EETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG-GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTT
T ss_pred ccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC-CCcEEEEEeccccchhhhccccccCCCceEEEcccCC
Confidence 4444477788766542 222110000 0011111222222 344444443211000 0 00
Q ss_pred --eEeeeecCCCceEEEEcCCCCe----EEEeecCCC------------CCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 169 --VKLNITNDSTGRLLSYNPRSSQ----VTVLLRNLT------------GPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 169 --~~~~~~~~~~G~l~~~d~~~g~----~~~~~~~l~------------~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
...+.....+|.+..+|..... ...+...-. ..+.++++||+++| ++-...+.|..+++..
T Consensus 226 ~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 226 NKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDKDA 304 (368)
T ss_dssp SCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEETTT
T ss_pred CCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEECCC
Confidence 0003334456777777665431 111111111 36799999999855 4555678899888763
Q ss_pred CCCCce-ee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 231 PRANSF-DI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 231 ~~~g~~-~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
+.. .. ....+....+++.+ +|.+.++...
T Consensus 305 ---~~~~~~~~~~~~~v~~~~~s~--~g~~l~~~s~ 335 (368)
T 3mmy_A 305 ---RTKLKTSEQLDQPISACCFNH--NGNIFAYASS 335 (368)
T ss_dssp ---TEEEEECCCCSSCEEEEEECT--TSSCEEEEEC
T ss_pred ---CcEEEEecCCCCCceEEEECC--CCCeEEEEec
Confidence 222 11 22234467899999 9976665543
No 265
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.05 Score=48.22 Aligned_cols=208 Identities=11% Similarity=-0.013 Sum_probs=117.8
Q ss_pred cCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCcEEEE
Q 048181 43 PVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLVV 120 (310)
Q Consensus 43 ~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~gi~~i 120 (310)
.+++++++...++.|..++...+. ..+... ........|. ++-...++.+.+-+....+..+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~---------------~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTP---------------NPRTGGEHPA-IISRGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEE---------------CCCTTCCCCS-EEEECSTTEEEEEETTTEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecC---------------CceeeeeCCc-eEEecCCCeEEEEEccCceEEe
Confidence 356778888889999888866332 222110 0011222344 3332357778777777667777
Q ss_pred eCCCCeE-EEeeccCCCccccCccceEEeC--CCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeec-
Q 048181 121 GPNGRLA-TQLATGAEGQAFHFLDGLDVDQ--GTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLR- 196 (310)
Q Consensus 121 d~~~~~~-~~~~~~~~g~~~~~pndvavd~--~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~- 196 (310)
+..+++. ..+... . -.....++++| + |+++++-. .+|.+..+|..+++......
T Consensus 110 ~~~~~~~~~~~~~~-~---~~~v~~~~~~~~~~-~~~l~s~s-----------------~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 110 DSKTNKVLREIEVD-S---ANEIIYMYGHNEVN-TEYFIWAD-----------------NRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp ETTTCCEEEEEECC-C---SSCEEEEECCC----CCEEEEEE-----------------TTCCEEEEESSSSCEEEEECC
T ss_pred ecCCcceeEEeecC-C---CCCEEEEEcCCCCC-CCEEEEEe-----------------CCCcEEEEECCCCcEEEEEec
Confidence 7776652 222111 1 12356788888 6 66666533 24678888877776543332
Q ss_pred C-CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeec-CCCCCceeeeCCCCCCcEEEEEecC-------CC
Q 048181 197 N-LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIIN-FQAKPHNIKRNPGLLQTFWEAAIIT-------RQ 267 (310)
Q Consensus 197 ~-l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~-l~g~Pdgl~~d~~~dG~l~va~~~~-------~~ 267 (310)
. -...+.++|+|||+ ++++-...+.|..+++.....-...+.. -.+....+++.+ +|.+.++.... +.
T Consensus 168 ~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~--~g~~l~s~~~~~v~iwd~~~ 244 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD--NGYWMVVECDQTVVCFDLRK 244 (343)
T ss_dssp CSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT--TSSEEEEEESSBEEEEETTS
T ss_pred CCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC--CCCEEEEEeCCeEEEEEcCC
Confidence 2 22468999999998 5566677889999998643211012211 223457788888 88766654432 11
Q ss_pred CCC----CC-----ce---eeEEECCCCcEEEEEec
Q 048181 268 PAG----TP-----VP---IGQRISAFGAVLDTISF 291 (310)
Q Consensus 268 ~~~----~~-----~~---~v~~~~~~G~~~~~~~~ 291 (310)
... .. .. ..+.++|+|+.+..-..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp STTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 111 00 11 13788899887766443
No 266
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.41 E-value=0.074 Score=48.59 Aligned_cols=190 Identities=9% Similarity=0.009 Sum_probs=101.7
Q ss_pred EEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 25 TKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 25 ~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
+.+.+.+.-..-.+++|.++|++++++..++.|..++...+...... .........+..+
T Consensus 139 ~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~------------------~~h~~~v~~~s~~-- 198 (420)
T 4gga_A 139 QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM------------------TSHSARVGSLSWN-- 198 (420)
T ss_dssp EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEEE--
T ss_pred EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE------------------eCCCCceEEEeeC--
Confidence 34455443334678999999998999999999999998754322111 0111233345553
Q ss_pred CCeEEEE-eCCCcEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 105 TRQLYIA-DAYSGLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 105 ~g~LyVa-d~~~gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
+.++++ .....+...+...... ..+. + .......+...++ |+..++-.. +|.+
T Consensus 199 -~~~l~sgs~d~~i~~~d~~~~~~~~~~~~----~-h~~~~~~~~~~~~-g~~l~s~~~-----------------D~~v 254 (420)
T 4gga_A 199 -SYILSSGSRSGHIHHHDVRVAEHHVATLS----G-HSQEVCGLRWAPD-GRHLASGGN-----------------DNLV 254 (420)
T ss_dssp -TTEEEEEETTSEEEEEETTSSSCEEEEEE----C-CSSCEEEEEECTT-SSEEEEEET-----------------TSCE
T ss_pred -CCEEEEEeCCCceeEeeecccceeeEEec----c-cccceeeeeecCC-CCeeeeeec-----------------cccc
Confidence 444444 3333466666554322 2221 1 1223457778874 666555332 3455
Q ss_pred EEEcCCCCe-----EEEeecCCCCCceeEEccCCCEEEEEe--cCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCC
Q 048181 182 LSYNPRSSQ-----VTVLLRNLTGPAGVAISVDSSFLLVSE--FTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPG 253 (310)
Q Consensus 182 ~~~d~~~g~-----~~~~~~~l~~pnGIa~~~dg~~Lyv~d--~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~ 253 (310)
..++..+++ +......-..-..++++|++..++++- +..+.|..+++.. +.... .......-.+.+..
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t---~~~~~~~~~~~~v~~~~~~~- 330 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---GACLSAVDAHSQVCSILWSP- 330 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT---TEEEEEEECSSCEEEEEEET-
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc---cccceeeccccceeeeeecC-
Confidence 555544332 112222223346889999877666654 3457788777653 22211 22222345566666
Q ss_pred CCCcEEEEEe
Q 048181 254 LLQTFWEAAI 263 (310)
Q Consensus 254 ~dG~l~va~~ 263 (310)
+++..++..
T Consensus 331 -~~~~lv~~s 339 (420)
T 4gga_A 331 -HYKELISGH 339 (420)
T ss_dssp -TTTEEEEEE
T ss_pred -CCCeEEEEE
Confidence 665555443
No 267
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.40 E-value=0.0024 Score=63.02 Aligned_cols=137 Identities=12% Similarity=0.064 Sum_probs=80.3
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EEEEeC-
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LYIADA- 113 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-LyVad~- 113 (310)
+.+++|.++|.+++. ..++.|+.++.+++........ . .. .......+++. ++|+ |+++..
T Consensus 18 ~~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~----------~---~~--~~~~~~~~~~S-pDg~~la~~~~~ 80 (719)
T 1z68_A 18 TFFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSN----------R---TM--KSVNASNYGLS-PDRQFVYLESDY 80 (719)
T ss_dssp CCCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECH----------H---HH--HTTTCSEEEEC-TTSSEEEEEEEE
T ss_pred CCccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEcc----------c---cc--cccceeeEEEC-CCCCeEEEEecC
Confidence 447899999974444 4588999999876532211100 0 00 00013468886 5665 444432
Q ss_pred --------CCcEEEEeCCCCeE---EEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeeeecCCCceE
Q 048181 114 --------YSGLLVVGPNGRLA---TQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 114 --------~~gi~~id~~~~~~---~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
...|+.+|.++++. ..+ . ...+.++++|+ |+ |.++. ++.|
T Consensus 81 ~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~----~~~~~~~~SPD-G~~la~~~-------------------~~~i 132 (719)
T 1z68_A 81 SKLWRYSYTATYYIYDLSNGEFVRGNEL----P----RPIQYLCWSPV-GSKLAYVY-------------------QNNI 132 (719)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCC----C----SSBCCEEECSS-TTCEEEEE-------------------TTEE
T ss_pred ceeEEeecceEEEEEECCCCccccceec----C----cccccceECCC-CCEEEEEE-------------------CCeE
Confidence 13488899888765 222 1 23567899995 64 44432 2467
Q ss_pred EEEcCCCCeEEEeecCC-------------------CCCceeEEccCCCEEEEEe
Q 048181 182 LSYNPRSSQVTVLLRNL-------------------TGPAGVAISVDSSFLLVSE 217 (310)
Q Consensus 182 ~~~d~~~g~~~~~~~~l-------------------~~pnGIa~~~dg~~Lyv~d 217 (310)
+.++..+++...+...- ....+++|||||++|+++.
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 77777666554433111 1225899999999887764
No 268
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.39 E-value=0.0094 Score=58.70 Aligned_cols=169 Identities=9% Similarity=-0.027 Sum_probs=85.3
Q ss_pred cceEEEccCCCEEEEEeC---------CCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCC
Q 048181 36 GESIAFEPVGGAFYTGVA---------DGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~---------~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g 106 (310)
..+++|.|||+.+..... ++.|+.++.+++...-. . ........+++. ++|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~----------------~---~l~~~~~~~~~S-PDG 121 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG----------------N---ELPRPIQYLCWS-PVG 121 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS----------------S---CCCSSBCCEEEC-SST
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc----------------e---ecCcccccceEC-CCC
Confidence 568999999985544332 46788888775432000 0 011234567886 556
Q ss_pred e-EEEEeCCCcEEEEeCCCCeEEEeeccCCCcc--------------ccCccceEEeCCCCe-EEEEcCCCccCccce--
Q 048181 107 Q-LYIADAYSGLLVVGPNGRLATQLATGAEGQA--------------FHFLDGLDVDQGTGV-VYFTDASGVYDFRTI-- 168 (310)
Q Consensus 107 ~-LyVad~~~gi~~id~~~~~~~~~~~~~~g~~--------------~~~pndvavd~~~G~-lyvtd~~~~~~~~~~-- 168 (310)
+ |..+ ....|+.++.++++...+........ +.....++++|+ |+ |+++..... ....+
T Consensus 122 ~~la~~-~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d~~-~~~~~~~ 198 (719)
T 1z68_A 122 SKLAYV-YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN-GKFLAYAEFNDT-DIPVIAY 198 (719)
T ss_dssp TCEEEE-ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT-SSEEEEEEEECT-TSCEEEE
T ss_pred CEEEEE-ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCC-CCEEEEEEECCC-CCceEEe
Confidence 4 4444 34468888888776655432111000 122358999995 64 444321100 00000
Q ss_pred ----------eEeee-----ecCCCceEEEEcCCCCeEE---Eee------cCCCCCceeEEccCCCEEEEEec-CC--C
Q 048181 169 ----------VKLNI-----TNDSTGRLLSYNPRSSQVT---VLL------RNLTGPAGVAISVDSSFLLVSEF-TG--N 221 (310)
Q Consensus 169 ----------~~~~~-----~~~~~G~l~~~d~~~g~~~---~~~------~~l~~pnGIa~~~dg~~Lyv~d~-~~--~ 221 (310)
...+. ...+...|+.+|.++++.. .+. ..-.....++|+||++.++.... .. .
T Consensus 199 ~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~ 278 (719)
T 1z68_A 199 SYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVS 278 (719)
T ss_dssp EECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEE
T ss_pred eccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeE
Confidence 00000 0012237888888766531 111 11123468999999864443222 22 3
Q ss_pred eEEEEE
Q 048181 222 RTLKYW 227 (310)
Q Consensus 222 ~I~~~~ 227 (310)
+|+.++
T Consensus 279 ~l~~~d 284 (719)
T 1z68_A 279 VLSICD 284 (719)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 588888
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.39 E-value=0.059 Score=52.30 Aligned_cols=83 Identities=7% Similarity=-0.009 Sum_probs=47.7
Q ss_pred CCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCC--CceeeeCCC
Q 048181 177 STGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAK--PHNIKRNPG 253 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~--Pdgl~~d~~ 253 (310)
..|.|+.+|+.+|++.--.......++-.+...+..+|+. +..+.|+.|+... |+..- ..++.. ..-+....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-~~dg~l~A~D~~t---G~~lW~~~~~~g~~a~P~~y~~- 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG-TGDGYFKAFDAKS---GKELWKFQTGSGIVSPPITWEQ- 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCCEEEEE-
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE-CCCCcEEEEECCC---CCEEEEecCCCCcccCceEEEE-
Confidence 4689999999998764222211112333333345567775 4678888888642 33211 222211 11256567
Q ss_pred CCCcEEEEEecC
Q 048181 254 LLQTFWEAAIIT 265 (310)
Q Consensus 254 ~dG~l~va~~~~ 265 (310)
+|..||+...+
T Consensus 539 -~G~qYv~~~~G 549 (582)
T 1flg_A 539 -DGEQYLGVTVG 549 (582)
T ss_dssp -TTEEEEEEEEC
T ss_pred -CCEEEEEEEcc
Confidence 89999998765
No 270
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.042 Score=56.20 Aligned_cols=155 Identities=6% Similarity=-0.061 Sum_probs=94.7
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
.-.+++|.+ |.++++...++.|..++...+...... ........+++++....|+++...
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~-------------------~~~~~V~~v~~sp~g~~l~sgs~d 119 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV-------------------FVPGKITSIDTDASLDWMLIGLQN 119 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE-------------------ECSSCEEEEECCTTCSEEEEEETT
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE-------------------cCCCCEEEEEECCCCCEEEEEcCC
Confidence 457899999 787777778899999987643221110 011235678887434455555555
Q ss_pred CcEEEEeCCCCeEEEee--------ccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 115 SGLLVVGPNGRLATQLA--------TGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~--------~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
..|..+|.++++...+. ....+ +....+.++++|+++.++++-. .+|.+ .+|.
T Consensus 120 g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~-h~~~V~sl~~sp~~~~~l~~g~-----------------~dg~v-lWd~ 180 (902)
T 2oaj_A 120 GSMIVYDIDRDQLSSFKLDNLQKSSFFPAA-RLSPIVSIQWNPRDIGTVLISY-----------------EYVTL-TYSL 180 (902)
T ss_dssp SCEEEEETTTTEEEEEEECCHHHHHTCSSS-CCCCCCEEEEETTEEEEEEEEC-----------------SSCEE-EEET
T ss_pred CcEEEEECCCCccccceecccccccccccc-CCCCeEEEEEccCCCCEEEEEe-----------------CCCcE-EEEC
Confidence 55888898877653221 11111 2345678999985334444432 24667 7777
Q ss_pred CCCeEEEeecCC-------------------CCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 187 RSSQVTVLLRNL-------------------TGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 187 ~~g~~~~~~~~l-------------------~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
.+++.......- ...+.++|+|||+ ++++-...+.|..+++.
T Consensus 181 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 181 VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDAN 241 (902)
T ss_dssp TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETT
T ss_pred CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECC
Confidence 666543322211 2357999999998 55666778888888875
No 271
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.30 E-value=0.0038 Score=52.98 Aligned_cols=165 Identities=15% Similarity=0.072 Sum_probs=88.5
Q ss_pred ceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 23 TFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 23 ~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
..+++--+ .+.....++++|+|.||-+ .+|.++++++... -..+.... + ...+.| -..-..+.+
T Consensus 31 ~a~~iG~~-gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~-t--~IG~~G---------w~~F~a~~f 95 (236)
T 1tl2_A 31 RATLIGKG-GWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA-K--KIGNGG---------WNQFQFLFF 95 (236)
T ss_dssp HSEEEESS-SCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC-E--EEECSC---------GGGCSEEEE
T ss_pred hccccCcc-ccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc-c--Eecccc---------cccceEEEE
Confidence 34445443 2567789999999998877 7899999998531 11111000 0 000000 001235788
Q ss_pred ecCCCeEEEEeCCCcEEEEeCCC-CeEEEeec--cCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCC
Q 048181 102 HYATRQLYIADAYSGLLVVGPNG-RLATQLAT--GAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 102 d~~~g~LyVad~~~gi~~id~~~-~~~~~~~~--~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
| .+|.||+. ....|+++++-+ +....+.. .+.........-|.++| +|.||..+ .
T Consensus 96 D-~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d------------------ 153 (236)
T 1tl2_A 96 D-PNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G------------------ 153 (236)
T ss_dssp C-TTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T------------------
T ss_pred C-CCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C------------------
Confidence 8 89999988 333499998733 11111111 01111122336789999 59999765 3
Q ss_pred ceEEEEcCCCC-------eEEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEE
Q 048181 179 GRLLSYNPRSS-------QVTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYW 227 (310)
Q Consensus 179 G~l~~~d~~~g-------~~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~ 227 (310)
|++++-.+-++ ..+.+. ++...=.=+.++++|. ||.++ ++++++..
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKFYEDY 207 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEEEEES
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeEEecC
Confidence 33444322111 111111 1111111266999986 77777 78888874
No 272
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.30 E-value=0.0046 Score=60.15 Aligned_cols=122 Identities=16% Similarity=0.281 Sum_probs=74.8
Q ss_pred CCCCcceEEEcc-CCCEEEEEeC---------------------CCeEEEEECCCc--------eEEeeeecCCCC-c-c
Q 048181 32 KAFGGESIAFEP-VGGAFYTGVA---------------------DGRILKYQAPDG--------FTDFAFTTPTRS-K-A 79 (310)
Q Consensus 32 ~~~~Pegia~d~-~G~l~~~d~~---------------------~g~I~r~~~~g~--------~~~~~~~~~~~~-~-~ 79 (310)
.+.+||++++++ +|.+|++-.. .|.|+|+.+++. +..+...+.... . .
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 567999999997 6888888642 378999986522 222222111100 0 0
Q ss_pred ccCCCccccCCCCCCceeeEEEecCCCeEEEEe-CC------------CcEEEEeCCCCeEEEeeccCCCccccCccceE
Q 048181 80 VCDGTTNLDLGPICRRTFGLALHYATRQLYIAD-AY------------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLD 146 (310)
Q Consensus 80 ~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad-~~------------~gi~~id~~~~~~~~~~~~~~g~~~~~pndva 146 (310)
...+.........+..|-.|+++ +.|+|||+. .. +.++.+++.++++..++....+.. .-|++
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd-~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE---~TG~~ 537 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCE---VTGIS 537 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCE---EEEEE
T ss_pred ccccccccCCCCCccCCcceEEC-CCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCcc---CcCee
Confidence 00000011112346789999998 789999974 31 237888998888888876544433 35889
Q ss_pred EeCCCCeEEEE
Q 048181 147 VDQGTGVVYFT 157 (310)
Q Consensus 147 vd~~~G~lyvt 157 (310)
++|+...|||.
T Consensus 538 fspDg~tlfvn 548 (592)
T 3zwu_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99964466665
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.28 E-value=0.033 Score=55.04 Aligned_cols=124 Identities=15% Similarity=0.226 Sum_probs=68.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCC-CceeeEEEecCCCeEEEEeCCCcEEEEeC
Q 048181 44 VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPIC-RRTFGLALHYATRQLYIADAYSGLLVVGP 122 (310)
Q Consensus 44 ~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~P~Gla~d~~~g~LyVad~~~gi~~id~ 122 (310)
+|. +|+...+++|+.++...+.+.+......... ......+ ....+++++ +++||+......|+.+|.
T Consensus 66 ~g~-vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~v~v~~~dg~l~alD~ 134 (668)
T 1kv9_A 66 DGV-IYTSMSWSRVIAVDAASGKELWRYDPEVAKV--------KARTSCCDAVNRGVALW--GDKVYVGTLDGRLIALDA 134 (668)
T ss_dssp TTE-EEEEEGGGEEEEEETTTCCEEEEECCCCCGG--------GGGGCTTCSCCCCCEEE--BTEEEEECTTSEEEEEET
T ss_pred CCE-EEEECCCCeEEEEECCCChhceEECCCCCcc--------ccccccccCCccceEEE--CCEEEEEcCCCEEEEEEC
Confidence 445 5555668899999987655555432111000 0000011 113466775 789999876666999999
Q ss_pred CCCeEEEeeccCCCc-cccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 123 NGRLATQLATGAEGQ-AFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 123 ~~~~~~~~~~~~~g~-~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
++|+...-....+.. ........++. +|.+|+...... ...+|.|+.+|..+|+..
T Consensus 135 ~tG~~~W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~------------~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 135 KTGKAIWSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAE------------YGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp TTCCEEEEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTT------------TCCBCEEEEEETTTCCEE
T ss_pred CCCCEeeeeccCCCCCcceecCCCEEE--CCEEEEeCCCCC------------cCCCCEEEEEECCCCcEE
Confidence 888754222211100 01111223444 488998764321 123578889998888764
No 274
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.28 E-value=0.078 Score=46.13 Aligned_cols=142 Identities=10% Similarity=0.018 Sum_probs=80.8
Q ss_pred eeeEEEecC-CCeEEEEe-CCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeee
Q 048181 96 TFGLALHYA-TRQLYIAD-AYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNI 173 (310)
Q Consensus 96 P~Gla~d~~-~g~LyVad-~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~ 173 (310)
...+++... ...++++. ....|..+|..+++...... + .-...+.++++|+ |+++++-.
T Consensus 174 v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~---~-h~~~v~~~~~s~~-~~~l~s~s-------------- 234 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI---G-HTGYLNTVTVSPD-GSLCASGG-------------- 234 (340)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC---C-CSSCEEEEEECTT-SSEEEEEE--------------
T ss_pred ccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec---C-CCCcEEEEEECCC-CCEEEEEe--------------
Confidence 345666422 23444443 33347778887765433221 1 1234578999994 87776643
Q ss_pred ecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee---------ecCCCC
Q 048181 174 TNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI---------INFQAK 244 (310)
Q Consensus 174 ~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~---------~~l~g~ 244 (310)
.+|.+..+|..+.+.......-...+.++++|++.. + +-...+.|..+++.+... ..++ ..-+..
T Consensus 235 ---~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~-~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 235 ---KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-L-CAATGPSIKIWDLEGKII-VDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp ---TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSE-E-EEEETTEEEEEETTTTEE-EEEECCC-------CCCCC
T ss_pred ---CCCeEEEEEeccCceeeeecCCceEEeeecCCCCce-e-eccCCCEEEEEECCCCeE-EEeccccceeeeccCCCCC
Confidence 246788888776655444444456688999998863 3 333567888888764210 0011 011223
Q ss_pred CceeeeCCCCCCcEEEEEec
Q 048181 245 PHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 245 Pdgl~~d~~~dG~l~va~~~ 264 (310)
...+++++ +|++.++...
T Consensus 309 v~~l~~s~--dg~~l~sgs~ 326 (340)
T 4aow_A 309 CTSLAWSA--DGQTLFAGYT 326 (340)
T ss_dssp EEEEEECT--TSSEEEEEET
T ss_pred EEEEEECC--CCCEEEEEeC
Confidence 45678888 8877666443
No 275
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.24 E-value=0.022 Score=56.65 Aligned_cols=209 Identities=14% Similarity=0.092 Sum_probs=109.8
Q ss_pred cceEEEccCCCEE-EEEeCCC----eEEEEECCCceE-EeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEE
Q 048181 36 GESIAFEPVGGAF-YTGVADG----RILKYQAPDGFT-DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLY 109 (310)
Q Consensus 36 Pegia~d~~G~l~-~~d~~~g----~I~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~Ly 109 (310)
-.+++|.|||+.+ |+....| .|+.++.+++.. ..... . ..-.++++.++ ..||
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~-------------------~-~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK-------------------W-VKFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE-------------------E-EESCCCEESTT-SEEE
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC-------------------C-ceeccEEEECC-CEEE
Confidence 3468999999744 4433333 588888775432 11000 0 00124667544 6666
Q ss_pred EEeCC--------------CcEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEee
Q 048181 110 IADAY--------------SGLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 110 Vad~~--------------~gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~ 172 (310)
++... ..|++.+..++.. ..+....+. + .+..++.++++ |+ |+++-...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-~-~~~~~~~~SpD-G~~l~~~~~~~----------- 289 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL-P-KRGHGASVSSD-GRWVVITSSEG----------- 289 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC-T-TCEEEEEECTT-SCEEEEEEECT-----------
T ss_pred EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-C-eEEEEEEECCC-CCEEEEEEEcc-----------
Confidence 65322 1377788765542 222222111 1 12357889995 74 54443211
Q ss_pred eecCCCceEEEEcCCCC--e-EEEeecCCCCCceeEEccCCCEEEEEec---CCCeEEEEEecCCCCCcee-e-ecCCCC
Q 048181 173 ITNDSTGRLLSYNPRSS--Q-VTVLLRNLTGPAGVAISVDSSFLLVSEF---TGNRTLKYWLRGPRANSFD-I-INFQAK 244 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~~g--~-~~~~~~~l~~pnGIa~~~dg~~Lyv~d~---~~~~I~~~~~~~~~~g~~~-~-~~l~g~ 244 (310)
...+..|+.+|.+++ + .+.+......-... +++||+.||+... .+.+|+++++++.. +..+ + ......
T Consensus 290 --~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~ 365 (741)
T 1yr2_A 290 --TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDN 365 (741)
T ss_dssp --TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSE
T ss_pred --CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCe
Confidence 012346888887665 4 55555443333333 4588998887643 25689999987532 2222 2 111122
Q ss_pred CceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecC
Q 048181 245 PHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 245 Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p 292 (310)
..++.++. +.++++..... ...+.+++.+|+....+..|
T Consensus 366 l~~~~~~~---~~lv~~~~~dg------~~~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 366 LESVGIAG---NRLFASYIHDA------KSQVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp EEEEEEEB---TEEEEEEEETT------EEEEEEEETTSCEEEECBCS
T ss_pred EEEEEEEC---CEEEEEEEECC------EEEEEEEeCCCCceeeccCC
Confidence 34556654 45655544332 24677777778777777665
No 276
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.20 E-value=0.094 Score=45.45 Aligned_cols=161 Identities=9% Similarity=0.010 Sum_probs=89.0
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEEE
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYIA 111 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyVa 111 (310)
..-.+++|+++|+++++...++.|.-++.++. ...+.. +..-...-..+++.++ +|+++++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~-----------------l~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDT-----------------LTGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEE-----------------ECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEE-----------------EccccCCeEEEEecCCCcCCEEEE
Confidence 34568999999998888888999988886532 111100 0111223457887422 3666554
Q ss_pred -eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 112 -DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 112 -d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
.....|...|.++++...+.. ..+ +-...+.++++|+. |.++++-. .+|.+..+|..++
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~~-~~~-h~~~v~~v~~~p~~~g~~l~s~s-----------------~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIAV-HAV-HSASVNSVQWAPHEYGPMLLVAS-----------------SDGKVSVVEFKEN 133 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCEE-ECC-CSSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEEBCSS
T ss_pred EcCCCEEEEEEcCCCceEEEEE-eec-CCCceeEEEeCcCCCCcEEEEEE-----------------CCCcEEEEEecCC
Confidence 334447777776653211111 111 11245788888731 55555432 2356666665433
Q ss_pred e---EEEeecCCCCCceeEEccCC------------CEEEEEecCCCeEEEEEecC
Q 048181 190 Q---VTVLLRNLTGPAGVAISVDS------------SFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 190 ~---~~~~~~~l~~pnGIa~~~dg------------~~Lyv~d~~~~~I~~~~~~~ 230 (310)
. ...+...-..-+.++|+|++ ..++++-...+.|..+++..
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEET
T ss_pred CceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 1 12222222345788888863 12566767778888888764
No 277
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.17 E-value=0.14 Score=46.96 Aligned_cols=197 Identities=13% Similarity=0.017 Sum_probs=107.9
Q ss_pred eEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCcE
Q 048181 38 SIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGL 117 (310)
Q Consensus 38 gia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~gi 117 (310)
.+.+ +++++++...++.|..++...+...... .........+++. +++.|+.+.....|
T Consensus 127 ~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~------------------~~h~~~V~~l~~~-~~~~l~s~s~dg~i 185 (464)
T 3v7d_B 127 CLQF--EDNYVITGADDKMIRVYDSINKKFLLQL------------------SGHDGGVWALKYA-HGGILVSGSTDRTV 185 (464)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEEC-STTEEEEEETTSCE
T ss_pred EEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEE------------------eCCCcCEEEEEEc-CCCEEEEEeCCCCE
Confidence 3444 5677888888999999997754322111 1122345678885 56655555555558
Q ss_pred EEEeCCCCeEEEeeccCCCccccCccceEEeCC-CCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe------
Q 048181 118 LVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG-TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ------ 190 (310)
Q Consensus 118 ~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~-~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~------ 190 (310)
..+|.++++....... .-...+.+++.+. ++..+++-.. +|.+..+|..++.
T Consensus 186 ~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEG----HNSTVRCLDIVEYKNIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp EEEETTTTEEEEEECC----CSSCEEEEEEEESSSCEEEEEEET-----------------TSCEEEEECCCCCCC----
T ss_pred EEEECCCCcEEEEECC----CCCccEEEEEecCCCCCEEEEEcC-----------------CCcEEEeeCCCCccccccc
Confidence 8889887754322221 1123455666631 3555554332 2445445443322
Q ss_pred ------------------EEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCcee-e-ecCCCCCceeee
Q 048181 191 ------------------VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFD-I-INFQAKPHNIKR 250 (310)
Q Consensus 191 ------------------~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~-~-~~l~g~Pdgl~~ 250 (310)
+..... ....-.+++++++.| ++-...+.|..+++.. +... . ..-......+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l-~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~v~~~~~ 318 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRG--HMASVRTVSGHGNIV-VSGSYDNTLIVWDVAQ---MKCLYILSGHTDRIYSTIY 318 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECC--CSSCEEEEEEETTEE-EEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEEE
T ss_pred ccCCcceEeeccCCCeEEEEEccC--ccceEEEEcCCCCEE-EEEeCCCeEEEEECCC---CcEEEEecCCCCCEEEEEE
Confidence 111111 112233557778754 4555677888888753 2221 1 222234567889
Q ss_pred CCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 251 NPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 251 d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
++ +|+..++....+ .+..+|. +|+.+..+...
T Consensus 319 ~~--~~~~l~sg~~dg--------~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 319 DH--ERKRCISASMDT--------TIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp ET--TTTEEEEEETTS--------CEEEEETTTTEEEEEECCC
T ss_pred cC--CCCEEEEEeCCC--------cEEEEECCCCcEEEEEeCC
Confidence 98 887666655432 5666774 57776666544
No 278
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.16 E-value=0.021 Score=56.29 Aligned_cols=210 Identities=10% Similarity=-0.016 Sum_probs=110.8
Q ss_pred cceEEEccCCCEE-EEEeCC----CeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe-EE
Q 048181 36 GESIAFEPVGGAF-YTGVAD----GRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ-LY 109 (310)
Q Consensus 36 Pegia~d~~G~l~-~~d~~~----g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~-Ly 109 (310)
-.+++|.|||+.+ |+.... ..|+.++.+++..... ... ... ...++++. ++|+ |+
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------------~~~-~~~-~~~~~~ws-pDg~~l~ 183 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------------DVI-EGG-KYATPKWT-PDSKGFY 183 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------------CCB-SCC-TTCCCEEC-TTSSEEE
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------------ccc-Ccc-cccceEEe-cCCCEEE
Confidence 4578899999743 343322 4688888775432100 000 000 11467886 5554 55
Q ss_pred EEeCCC-------------cEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCe-EEEEcCCCccCccceeEeee
Q 048181 110 IADAYS-------------GLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNI 173 (310)
Q Consensus 110 Vad~~~-------------gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~ 173 (310)
.+.... .|++++..++.. ..+....+. + .+..+++++++ |+ |+++-...
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-~-~~~~~~~~SpD-G~~l~~~~~~~------------ 248 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-P-TTFLQSDLSRD-GKYLFVYILRG------------ 248 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-T-TCEEEEEECTT-SCCEEEEEEET------------
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-C-EEEEEEEECCC-CCEEEEEEeCC------------
Confidence 554322 288888877642 222222111 1 23347889995 64 44432111
Q ss_pred ecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEec---CCCeEEEEEecCCCCCc-eee-ecCC-CCCce
Q 048181 174 TNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEF---TGNRTLKYWLRGPRANS-FDI-INFQ-AKPHN 247 (310)
Q Consensus 174 ~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~---~~~~I~~~~~~~~~~g~-~~~-~~l~-g~Pdg 247 (310)
.....|+.++..+++.+.+...........+ ++|+ +|+... .+.+|+++++++..... ..+ ..-+ ....+
T Consensus 249 --~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 249 --WSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp --TTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred --CCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 0123677777666666666655444455555 6787 777644 35789999886532111 222 1111 12345
Q ss_pred eeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecC
Q 048181 248 IKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 248 l~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p 292 (310)
++++. +.++++..... ...+.+++.+|+....+..|
T Consensus 325 ~~~~~---~~lv~~~~~dg------~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 325 VSIVG---GHLSLEYLKDA------TSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp EEEET---TEEEEEEEETT------EEEEEEEETTCCEEEECCCS
T ss_pred EEEEC---CEEEEEEEECC------EEEEEEEeCCCCeeEEecCC
Confidence 66654 56666544332 24567777777766666665
No 279
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.15 E-value=0.011 Score=52.25 Aligned_cols=115 Identities=7% Similarity=0.001 Sum_probs=70.9
Q ss_pred cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEee
Q 048181 116 GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLL 195 (310)
Q Consensus 116 gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~ 195 (310)
.|+.++.++++.+.+ .....++++|++..|+++.... ......|+.++.++++...+.
T Consensus 44 ~l~~~d~~~~~~~~l---------~~~~~~~~SpDg~~la~~~~~~-------------~~~~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 44 TIVIENLKNNARRFI---------ENATMPRISPDGKKIAFMRANE-------------EKKVSEIWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEEETTTCCEEEE---------ESCEEEEECTTSSEEEEEEEET-------------TTTEEEEEEEETTTTEEEEEE
T ss_pred eEEEEeCCCCceEEc---------ccCCCeEECCCCCEEEEEEecc-------------CCCcceEEEEECCCCceEEEE
Confidence 377788877765544 1245688999533465543210 012246899998877766655
Q ss_pred cCCCCCceeEEccCCCEEEEEecC--------------------------CCeEEEEEecCCCCCce-ee-ecCCCCCce
Q 048181 196 RNLTGPAGVAISVDSSFLLVSEFT--------------------------GNRTLKYWLRGPRANSF-DI-INFQAKPHN 247 (310)
Q Consensus 196 ~~l~~pnGIa~~~dg~~Lyv~d~~--------------------------~~~I~~~~~~~~~~g~~-~~-~~l~g~Pdg 247 (310)
..-. ...++|+|||+.|+++... ..+|+++++.+ +.. .. .. + ....
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~---~~~~~~l~~-~-~~~~ 175 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES---EEVIEEFEK-P-RFSS 175 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT---TEEEEEEEE-E-TTCE
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC---CeEEeeecC-C-Cccc
Confidence 4323 7899999999988887532 35688888764 333 22 22 3 4566
Q ss_pred eeeCCCCCCcEEEE
Q 048181 248 IKRNPGLLQTFWEA 261 (310)
Q Consensus 248 l~~d~~~dG~l~va 261 (310)
+++.+ || ++++
T Consensus 176 ~~~sp--dg-~~~~ 186 (347)
T 2gop_A 176 GIWHR--DK-IVVN 186 (347)
T ss_dssp EEEET--TE-EEEE
T ss_pred ccCCC--Ce-EEEE
Confidence 77777 77 4443
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.15 E-value=0.075 Score=51.83 Aligned_cols=80 Identities=10% Similarity=0.040 Sum_probs=46.9
Q ss_pred CCceEEEEcCCCCeEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCce----ee-ecCCCCCceeee
Q 048181 177 STGRLLSYNPRSSQVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSF----DI-INFQAKPHNIKR 250 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~----~~-~~l~g~Pdgl~~ 250 (310)
..|.|+.+|+.+|++.-... ....-.|. +...|..+|+. +..+.|+.|+... |+. ++ ....+.| +..
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-~~tagg~vf~g-t~dg~l~A~D~~t---G~~lW~~~l~~g~~~~P--~~y 523 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGT-MATAGDLVFYG-TLDGYLKARDSDT---GDLLWKFKIPSGAIGYP--MTY 523 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBC-EEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCC--EEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcc-eEecCCEEEEE-CCCCeEEEEECCC---CCEEEEeeCCCCcEecc--EEE
Confidence 45899999999987643221 22222242 33345567775 5678888888653 332 11 2222334 555
Q ss_pred CCCCCCcEEEEEecC
Q 048181 251 NPGLLQTFWEAAIIT 265 (310)
Q Consensus 251 d~~~dG~l~va~~~~ 265 (310)
.. +|.+||+...+
T Consensus 524 ~~--~G~qyv~~~~G 536 (599)
T 1w6s_A 524 TH--KGTQYVAIYYG 536 (599)
T ss_dssp EE--TTEEEEEEEEC
T ss_pred Ee--CCEEEEEEEcc
Confidence 56 89999987665
No 281
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.14 E-value=0.13 Score=45.98 Aligned_cols=85 Identities=8% Similarity=-0.021 Sum_probs=54.3
Q ss_pred cCCCceEEEEcCCCCe-----------------EEEeecCCCCCceeEEccCCCEEEEEecCCCe-EEEEEecCCCCCce
Q 048181 175 NDSTGRLLSYNPRSSQ-----------------VTVLLRNLTGPAGVAISVDSSFLLVSEFTGNR-TLKYWLRGPRANSF 236 (310)
Q Consensus 175 ~~~~G~l~~~d~~~g~-----------------~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~-I~~~~~~~~~~g~~ 236 (310)
...+|.|..+|..+++ +..+...-...+.++|+|||+ ++++-+..+. |..+++.. +..
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~---~~~ 230 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTED---GVL 230 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTT---CCE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCC---CcE
Confidence 4567888888887654 333333334568999999998 5556667776 88887753 222
Q ss_pred --eee-c-CCCCCceeeeCCCCCCcEEEEEecC
Q 048181 237 --DII-N-FQAKPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 237 --~~~-~-l~g~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
.+. + -.+....+++++ +|++.++....
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~--~~~~l~s~s~d 261 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWST--DGSKLAVVSDK 261 (355)
T ss_dssp EEEEECTTCCSCEEEEEECT--TSCEEEEEETT
T ss_pred EEEEEcCCCCCcEEEEEECC--CCCEEEEEECC
Confidence 112 2 334457789999 99877766543
No 282
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.049 Score=54.34 Aligned_cols=195 Identities=11% Similarity=0.001 Sum_probs=107.2
Q ss_pred CCCCCCcceEEEccC--CCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC-
Q 048181 30 PPKAFGGESIAFEPV--GGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT- 105 (310)
Q Consensus 30 ~~~~~~Pegia~d~~--G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~- 105 (310)
.+.-....+++|.++ |+++++...+|.|..++..++. ..... ..........+++. ++
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~-----------------~~~h~~~V~~v~~s-p~~ 111 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV-----------------HAVHSASVNSVQWA-PHE 111 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE-----------------ECCCSSCEEEEEEC-CGG
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc-----------------ccCCCCCeEEEEEC-CCC
Confidence 333345678999877 8888888889999988866442 11110 01122345678886 44
Q ss_pred -CeEEE-EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCC------------CCeEEEEcCCCccCccceeEe
Q 048181 106 -RQLYI-ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG------------TGVVYFTDASGVYDFRTIVKL 171 (310)
Q Consensus 106 -g~LyV-ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~------------~G~lyvtd~~~~~~~~~~~~~ 171 (310)
+++++ +.....|..+|..++....... ..+ .-.....++++|. ++..+++.
T Consensus 112 ~~~~l~sgs~dg~I~vwdl~~~~~~~~~~-~~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg------------- 176 (753)
T 3jro_A 112 YGPLLLVASSDGKVSVVEFKENGTTSPII-IDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTG------------- 176 (753)
T ss_dssp GCSEEEEEETTSEEEEEECCSSSCCCCEE-EEC-CSSCEEEEEECCCC---------CGGGCCEEEE-------------
T ss_pred CCCEEEEEeCCCcEEEEEeecCCCcceeE-eec-CCCceEEEEecCcccccccccccCCCCCEEEEE-------------
Confidence 55554 4444447777776542111000 011 1123456777762 13333332
Q ss_pred eeecCCCceEEEEcCCCC----eEEE-eecCCCCCceeEEccC---CCEEEEEecCCCeEEEEEecCCCCCce-ee---e
Q 048181 172 NITNDSTGRLLSYNPRSS----QVTV-LLRNLTGPAGVAISVD---SSFLLVSEFTGNRTLKYWLRGPRANSF-DI---I 239 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~~~g----~~~~-~~~~l~~pnGIa~~~d---g~~Lyv~d~~~~~I~~~~~~~~~~g~~-~~---~ 239 (310)
..+|.|..+|..++ .... +...-.....++|+|+ ++ ++++-...+.|..+++........ .+ .
T Consensus 177 ----s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~ 251 (753)
T 3jro_A 177 ----GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEE 251 (753)
T ss_dssp ----ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSS
T ss_pred ----ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccC
Confidence 22466666665433 1111 1222334689999999 65 566667788899888875321111 11 1
Q ss_pred cCCCCCceeeeCCCCCCcEEEEEec
Q 048181 240 NFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 240 ~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
...+....+++++ +|.+.++...
T Consensus 252 ~~~~~v~~l~~sp--dg~~l~s~s~ 274 (753)
T 3jro_A 252 KFPDVLWRASWSL--SGNVLALSGG 274 (753)
T ss_dssp CCSSCCCCEEECT--TTCCEEEECS
T ss_pred CCCCceEEEEEcC--CCCEEEEEcC
Confidence 2234466789998 8876655443
No 283
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.12 E-value=0.15 Score=46.57 Aligned_cols=148 Identities=9% Similarity=-0.039 Sum_probs=85.0
Q ss_pred ceeeEEEecCCCeEEEEeCC-CcEEEEeCCCCeEEE-eeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEee
Q 048181 95 RTFGLALHYATRQLYIADAY-SGLLVVGPNGRLATQ-LATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLN 172 (310)
Q Consensus 95 ~P~Gla~d~~~g~LyVad~~-~gi~~id~~~~~~~~-~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~ 172 (310)
...++.+. .+++.+++... ..+..++..+++... ...... ........+++.+.+.+++++-.
T Consensus 232 ~~~~~~~~-~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~~~la~~~------------- 296 (420)
T 4gga_A 232 EVCGLRWA-PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVLATGG------------- 296 (420)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCTTEEEEEE-------------
T ss_pred ceeeeeec-CCCCeeeeeeccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcccEEEEEe-------------
Confidence 34567775 55655554333 336666655432110 000000 01123456677775455554422
Q ss_pred eecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEec-CCCeEEEEEecCCCCCce--eeecCCCCCceee
Q 048181 173 ITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEF-TGNRTLKYWLRGPRANSF--DIINFQAKPHNIK 249 (310)
Q Consensus 173 ~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~-~~~~I~~~~~~~~~~g~~--~~~~l~g~Pdgl~ 249 (310)
...++.|..+|..+++.......-.....++++++++.|+++.. ..+.|..+++.. +.. ++.+-.+....++
T Consensus 297 --gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~---~~~v~~l~gH~~~V~~l~ 371 (420)
T 4gga_A 297 --GTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT---MAKVAELKGHTSRVLSLT 371 (420)
T ss_dssp --CTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT---CCEEEEECCCSSCEEEEE
T ss_pred --ecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC---CcEEEEEcCCCCCEEEEE
Confidence 12357788888888876665555567789999999998777643 568888888753 221 1122123456789
Q ss_pred eCCCCCCcEEEEEec
Q 048181 250 RNPGLLQTFWEAAII 264 (310)
Q Consensus 250 ~d~~~dG~l~va~~~ 264 (310)
+.+ ||.+.++...
T Consensus 372 ~sp--dg~~l~S~s~ 384 (420)
T 4gga_A 372 MSP--DGATVASAAA 384 (420)
T ss_dssp ECT--TSSCEEEEET
T ss_pred EcC--CCCEEEEEec
Confidence 999 9987766544
No 284
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.06 E-value=0.087 Score=45.46 Aligned_cols=115 Identities=13% Similarity=0.072 Sum_probs=59.1
Q ss_pred CCcceEEEccC--CCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC--CCe
Q 048181 34 FGGESIAFEPV--GGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA--TRQ 107 (310)
Q Consensus 34 ~~Pegia~d~~--G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~--~g~ 107 (310)
....+++|.++ +.++++...++.|..++..... ..+...... .+ ..............+++.+. ++.
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~p~~~~~~ 183 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM----KV---LSIPPANHLQSDFCLSWCPSRFSPE 183 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE----ES---CSCCCSSCSCCCEEEEECCCSSSCC
T ss_pred CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc----cc---cccccCCcccceeEEEeccCCCCCc
Confidence 45778999998 9988888889999999865321 111100000 00 00000112234557788633 255
Q ss_pred EEEEeCCCc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCC----eEEEEc
Q 048181 108 LYIADAYSG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTG----VVYFTD 158 (310)
Q Consensus 108 LyVad~~~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G----~lyvtd 158 (310)
++++....+ +...+...++...+. ...+ +-...+.++++++ | +++++-
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-h~~~i~~~~~~p~-~~~~~~~l~s~ 236 (351)
T 3f3f_A 184 KLAVSALEQAIIYQRGKDGKLHVAA-KLPG-HKSLIRSISWAPS-IGRWYQLIATG 236 (351)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEE-ECCC-CCSCEEEEEECCC-SSCSSEEEEEE
T ss_pred EEEEecCCCcEEEEccCCCceeeee-ecCC-CCcceeEEEECCC-CCCcceEEEEE
Confidence 544433333 544444444433222 2222 1234578889984 6 566554
No 285
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.13 Score=46.87 Aligned_cols=211 Identities=11% Similarity=0.072 Sum_probs=112.5
Q ss_pred CCCcceEEEcc-CCCEEEEEeCCCeEEEEECCC---ceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 33 AFGGESIAFEP-VGGAFYTGVADGRILKYQAPD---GFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 33 ~~~Pegia~d~-~G~l~~~d~~~g~I~r~~~~g---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
-....+++|.+ +|.++++...++.|..++... +.. +. + .... ........+++. +++.+
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~-~~----------~----~~~~-~h~~~v~~~~~~-~~~~~ 125 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV-YS----------S----SLTY-DCSSTVTQITMI-PNFDA 125 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC-CS----------C----SEEE-ECSSCEEEEEEC-TTSSE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc-cc----------e----eeec-cCCCCEEEEEEe-CCCCE
Confidence 35678999999 999888888899998887542 110 00 0 0000 112345688997 55655
Q ss_pred EE-EeCCCcEEEEeCC---CCeEEEeec-----cCCCc---cccCccceE--EeCCCCeEEEEcCCCccCccceeEeeee
Q 048181 109 YI-ADAYSGLLVVGPN---GRLATQLAT-----GAEGQ---AFHFLDGLD--VDQGTGVVYFTDASGVYDFRTIVKLNIT 174 (310)
Q Consensus 109 yV-ad~~~gi~~id~~---~~~~~~~~~-----~~~g~---~~~~pndva--vd~~~G~lyvtd~~~~~~~~~~~~~~~~ 174 (310)
++ +.....|..+|.+ .++...... ...-. .-.....++ ..+ ++.++++-
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~---------------- 188 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVAL---------------- 188 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEE----------------
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEE----------------
Confidence 44 4444335555542 222211110 00000 001122222 224 24444443
Q ss_pred cCCCceEEEEcCCCCeEEEeecC---CCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCC--CCCcee
Q 048181 175 NDSTGRLLSYNPRSSQVTVLLRN---LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQ--AKPHNI 248 (310)
Q Consensus 175 ~~~~G~l~~~d~~~g~~~~~~~~---l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~--g~Pdgl 248 (310)
..+|.|..+|..+++....... -...+.++|+|++++ +++-+..+.|..+++.. +.... ..+. .....+
T Consensus 189 -~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 189 -TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV-LILGTTRGIIDIWDIRF---NVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp -ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE-EEEEETTSCEEEEETTT---TEEEEEEBCTTCEEEEEE
T ss_pred -eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE-EEEEcCCCeEEEEEcCC---ccEEEEEecCCCCceEEE
Confidence 2357888899877765443332 346789999999985 45556678888888753 22111 1111 112345
Q ss_pred ----eeCCCCCCcEEEEEecCCCCCCCCceeeEEECC-CCcEEEEEecC
Q 048181 249 ----KRNPGLLQTFWEAAIITRQPAGTPVPIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 249 ----~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~-~G~~~~~~~~p 292 (310)
.+++ +|.+.++.... +.+..+|. .|+.+..+...
T Consensus 264 ~~~~~~s~--~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 264 EVCQFYGK--NSVIVVGGSSK--------TFLTIWNFVKGHCQYAFINS 302 (437)
T ss_dssp EECTTTCT--TEEEEEEESTT--------EEEEEEETTTTEEEEEEESS
T ss_pred EeccccCC--CccEEEEEcCC--------CcEEEEEcCCCcEEEEEEcC
Confidence 3345 66555554433 36777775 47777777643
No 286
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.99 E-value=0.13 Score=50.65 Aligned_cols=168 Identities=10% Similarity=0.126 Sum_probs=86.1
Q ss_pred eEEEecCCCeEEEEeCC-------------CcEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCe-EEEEcCCC
Q 048181 98 GLALHYATRQLYIADAY-------------SGLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGV-VYFTDASG 161 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~-------------~gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~-lyvtd~~~ 161 (310)
++++. ++..||++... ..|++.+..++.. ..+....+..+ .+-.++.++++ |+ |+++-...
T Consensus 179 ~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~-~~~~~~~~SpD-g~~l~~~~~~~ 255 (693)
T 3iuj_A 179 GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH-HRYVGATVTED-DRFLLISAANS 255 (693)
T ss_dssp CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC-CSEEEEEECTT-SCEEEEEEESS
T ss_pred cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC-eEEEEEEEcCC-CCEEEEEEccC
Confidence 45664 44556665332 2377777665432 22222211011 12346788985 64 55543221
Q ss_pred ccCccceeEeeeecCCCceEEEEcCCCC--eEEEeecCCCCCceeEEccCCCEEEEEecC---CCeEEEEEecCCCCCce
Q 048181 162 VYDFRTIVKLNITNDSTGRLLSYNPRSS--QVTVLLRNLTGPAGVAISVDSSFLLVSEFT---GNRTLKYWLRGPRANSF 236 (310)
Q Consensus 162 ~~~~~~~~~~~~~~~~~G~l~~~d~~~g--~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~---~~~I~~~~~~~~~~g~~ 236 (310)
.....+|.+|.+++ +.+.+......-... ++++|+.||+.-.. +.+|+++++++......
T Consensus 256 --------------~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~ 320 (693)
T 3iuj_A 256 --------------TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW 320 (693)
T ss_dssp --------------SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred --------------CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence 11246888886544 455554433222222 67788878776433 47899999876432112
Q ss_pred e-eecCCCCCceeeeCCCCCCc-EEEEEecCCCCCCCCceeeEEECCCCcEEEEEecCC
Q 048181 237 D-IINFQAKPHNIKRNPGLLQT-FWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFEA 293 (310)
Q Consensus 237 ~-~~~l~g~Pdgl~~d~~~dG~-l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p~ 293 (310)
+ +. +...+-+.++. +|+ |.++..... ...+.+++.+|+....+.+|.
T Consensus 321 ~~l~--~~~~~~~~~s~--~g~~lv~~~~~~g------~~~l~~~d~~g~~~~~l~~p~ 369 (693)
T 3iuj_A 321 RDLI--PERQQVLTVHS--GSGYLFAEYMVDA------TARVEQFDYEGKRVREVALPG 369 (693)
T ss_dssp EEEE--CCCSSCEEEEE--ETTEEEEEEEETT------EEEEEEECTTSCEEEEECCSS
T ss_pred EEEe--cCCCCEEEEEE--ECCEEEEEEEECC------eeEEEEEECCCCeeEEeecCC
Confidence 2 21 11112224444 443 444433221 246788888888878777764
No 287
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.028 Score=54.40 Aligned_cols=151 Identities=11% Similarity=0.119 Sum_probs=92.6
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCce---------EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGF---------TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYAT 105 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~ 105 (310)
.-.+++|.|||+++++...+|+|.-++..++. .++.. + .......-..+++. ++
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~-----------~-----~~gh~~~V~sVawS-Pd 193 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL-----------S-----DAGSKDWVTHIVWY-ED 193 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC-----------S-----CTTCCCCEEEEEEE-TT
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeec-----------c-----cccccccEEEEEEc-CC
Confidence 46789999999999999999999999987542 11110 0 00112345688997 67
Q ss_pred CeEEEEeCCCcEEEEeCCCCeEEEeeccC-CCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 106 RQLYIADAYSGLLVVGPNGRLATQLATGA-EGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 106 g~LyVad~~~gi~~id~~~~~~~~~~~~~-~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
| |.++...+.+..++.+++....+.... .+. -....+++++ +..|-.+ . +++|..+
T Consensus 194 g-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h-~~~V~svaFs--g~~LASa-~------------------~~tIkLW 250 (588)
T 2j04_A 194 V-LVAALSNNSVFSMTVSASSHQPVSRMIQNAS-RRKITDLKIV--DYKVVLT-C------------------PGYVHKI 250 (588)
T ss_dssp E-EEEEETTCCEEEECCCSSSSCCCEEEEECCC-SSCCCCEEEE--TTEEEEE-C------------------SSEEEEE
T ss_pred c-EEEEeCCCeEEEEECCCCccccceeeecccc-cCcEEEEEEE--CCEEEEE-e------------------CCeEEEE
Confidence 7 655555666888888776531100011 111 1346788887 2444333 1 2678888
Q ss_pred cCCCCeEEEee-cCCCCCceeEE--ccCCCEEEEEecCCC-eEEEE
Q 048181 185 NPRSSQVTVLL-RNLTGPAGVAI--SVDSSFLLVSEFTGN-RTLKY 226 (310)
Q Consensus 185 d~~~g~~~~~~-~~l~~pnGIa~--~~dg~~Lyv~d~~~~-~I~~~ 226 (310)
|..+++..... +....-++|+| +||+..|.++. ..+ +||.+
T Consensus 251 d~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~-edG~klw~~ 295 (588)
T 2j04_A 251 DLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN-KTSYKVLLE 295 (588)
T ss_dssp ETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS-SCEEEEEES
T ss_pred ECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc-CCCCEEEee
Confidence 88777774444 44455689999 99997555554 333 46653
No 288
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.93 E-value=0.24 Score=45.44 Aligned_cols=228 Identities=8% Similarity=-0.062 Sum_probs=120.3
Q ss_pred CCcceEEEc--cCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCc-----cccCCCCCCceeeEEEecCCC
Q 048181 34 FGGESIAFE--PVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTT-----NLDLGPICRRTFGLALHYATR 106 (310)
Q Consensus 34 ~~Pegia~d--~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~P~Gla~d~~~g 106 (310)
....++++. +++.++++...++.|..++........................ .............+.. ...
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~ 281 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG--HGN 281 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE--ETT
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC--CCC
Confidence 345567776 4667777788888888887653221100000000000000000 0000011111223322 244
Q ss_pred eEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 107 QLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 107 ~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
.|+++.....|..+|..+++...... + +-.....++++++ |+.+++-. .+|.|..+|.
T Consensus 282 ~l~~~~~d~~i~vwd~~~~~~~~~~~---~-~~~~v~~~~~~~~-~~~l~sg~-----------------~dg~i~vwd~ 339 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQMKCLYILS---G-HTDRIYSTIYDHE-RKRCISAS-----------------MDTTIRIWDL 339 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC---C-CSSCEEEEEEETT-TTEEEEEE-----------------TTSCEEEEET
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEec---C-CCCCEEEEEEcCC-CCEEEEEe-----------------CCCcEEEEEC
Confidence 45555555558888987765432221 1 1234578899995 76665543 2477888888
Q ss_pred CCCeEEEeec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEec
Q 048181 187 RSSQVTVLLR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 187 ~~g~~~~~~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.+++...... .-.....++++ ++ .+++-...+.|..+++... .... .........+++.. +|++.++...
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~s~dg~v~vwd~~~~---~~~~~~~~~~~~~~~~~~~--~~~~l~~~~d 411 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLS--DK-FLVSAAADGSIRGWDANDY---SRKFSYHHTNLSAITTFYV--SDNILVSGSE 411 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEC--SS-EEEEEETTSEEEEEETTTC---CEEEEEECTTCCCEEEEEE--CSSEEEEEET
T ss_pred CCCcEEEEEeCCCCcEEEEEEc--CC-EEEEEeCCCcEEEEECCCC---ceeeeecCCCCccEEEEEe--CCCEEEEecC
Confidence 7776544333 23345678887 44 4566677888999988642 2222 22223355678888 8887777664
Q ss_pred CCCCCCCCceeeEEEC-CCCcEEEEEecCCCccccceeEEEe
Q 048181 265 TRQPAGTPVPIGQRIS-AFGAVLDTISFEAQYSTTPISEVQP 305 (310)
Q Consensus 265 ~~~~~~~~~~~v~~~~-~~G~~~~~~~~p~~~~~~~~t~~~~ 305 (310)
. .+..+| .+|+.+..+..+.. ..|+++.-
T Consensus 412 g---------~i~iwd~~~g~~~~~~~~~~~---~~v~~v~~ 441 (464)
T 3v7d_B 412 N---------QFNIYNLRSGKLVHANILKDA---DQIWSVNF 441 (464)
T ss_dssp T---------EEEEEETTTCCEEESCTTTTC---SEEEEEEE
T ss_pred C---------eEEEEECCCCcEEehhhccCC---CcEEEEEe
Confidence 3 677777 46777765444432 35555543
No 289
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.93 E-value=0.22 Score=49.05 Aligned_cols=152 Identities=14% Similarity=0.186 Sum_probs=81.0
Q ss_pred eeEEEecCCCe-EEEEeC---C-CcEEEEeCCCC--eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcccee
Q 048181 97 FGLALHYATRQ-LYIADA---Y-SGLLVVGPNGR--LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 97 ~Gla~d~~~g~-LyVad~---~-~gi~~id~~~~--~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~ 169 (310)
.++.+. ++|+ |+++.. . +.|+.++.+++ ..+.+....... . .. ++++++.|||.....
T Consensus 237 ~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~--~---~~-~~~~g~~l~~~t~~~-------- 301 (693)
T 3iuj_A 237 VGATVT-EDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD--V---SL-VDNKGSTLYLLTNRD-------- 301 (693)
T ss_dssp EEEEEC-TTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC--E---EE-EEEETTEEEEEECTT--------
T ss_pred EEEEEc-CCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce--E---EE-EeccCCEEEEEECCC--------
Confidence 467776 5665 544322 1 25888887654 444443322211 1 11 444457888764321
Q ss_pred EeeeecCCCceEEEEcCCCCeE---EEeecCCCCCceeEEccCCCEEEEEecCCC--eEEEEEecCCCCCceeeecCC--
Q 048181 170 KLNITNDSTGRLLSYNPRSSQV---TVLLRNLTGPAGVAISVDSSFLLVSEFTGN--RTLKYWLRGPRANSFDIINFQ-- 242 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~~---~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~--~I~~~~~~~~~~g~~~~~~l~-- 242 (310)
.++++|+++|.+++.. +.+...-. +-+.+++++++|+++....+ +|+.+++++. ..+...++
T Consensus 302 ------~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~---~~~~l~~p~~ 370 (693)
T 3iuj_A 302 ------APNRRLVTVDAANPGPAHWRDLIPERQ--QVLTVHSGSGYLFAEYMVDATARVEQFDYEGK---RVREVALPGL 370 (693)
T ss_dssp ------CTTCEEEEEETTSCCGGGCEEEECCCS--SCEEEEEETTEEEEEEEETTEEEEEEECTTSC---EEEEECCSSS
T ss_pred ------CCCCEEEEEeCCCCCccccEEEecCCC--CEEEEEEECCEEEEEEEECCeeEEEEEECCCC---eeEEeecCCC
Confidence 2467899999876543 44443222 22388899998888766554 6888877642 21112222
Q ss_pred CCCceeeeCCCCCC-cEEEEEecCCCCCCCCceeeEEECC
Q 048181 243 AKPHNIKRNPGLLQ-TFWEAAIITRQPAGTPVPIGQRISA 281 (310)
Q Consensus 243 g~Pdgl~~d~~~dG-~l~va~~~~~~~~~~~~~~v~~~~~ 281 (310)
+.-.++..+. ++ .+++.......| +.+.++|.
T Consensus 371 ~~~~~~~~~~--d~~~l~~~~ss~~tP-----~~l~~~d~ 403 (693)
T 3iuj_A 371 GSVSGFNGKH--DDPALYFGFENYAQP-----PTLYRFEP 403 (693)
T ss_dssp SEEEECCCCT--TCSCEEEEEECSSSC-----CEEEEECT
T ss_pred ceEEeeecCC--CCCEEEEEecCCCCC-----CEEEEEEC
Confidence 1223444554 55 566665543322 34555554
No 290
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.93 E-value=0.14 Score=50.76 Aligned_cols=124 Identities=13% Similarity=0.165 Sum_probs=67.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCC-CceeeEEEecCCCeEEEEeCCCcEEEEeC
Q 048181 44 VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPIC-RRTFGLALHYATRQLYIADAYSGLLVVGP 122 (310)
Q Consensus 44 ~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~P~Gla~d~~~g~LyVad~~~gi~~id~ 122 (310)
+|. +|+...+++|+.++...+.+.+......... ......+ ....+++++ +++||+......|+.+|.
T Consensus 70 ~g~-vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~g~v~v~~~dg~l~AlDa 138 (689)
T 1yiq_A 70 DGV-MYTTGPFSVVYALDARDGRLIWKYDPQSDRH--------RAGEACCDAVNRGVAVW--KGKVYVGVLDGRLEAIDA 138 (689)
T ss_dssp TTE-EEEECGGGCEEEEETTTCCEEEEECCCCCGG--------GGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEET
T ss_pred CCE-EEEEcCCCeEEEEECCCCceeEEEcCCCCcc--------ccccccccCCCCccEEE--CCEEEEEccCCEEEEEEC
Confidence 444 5666668899999987655555432111000 0000001 112356774 789999876666999999
Q ss_pred CCCeEEEeeccC-CCcc-ccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE
Q 048181 123 NGRLATQLATGA-EGQA-FHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT 192 (310)
Q Consensus 123 ~~~~~~~~~~~~-~g~~-~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~ 192 (310)
++|+...-.... +... .......++. +|.+|+...... ...+|.|+.+|..+|+..
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~------------~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 139 KTGQRAWSVDTRADHKRSYTITGAPRVV--NGKVVIGNGGAE------------FGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp TTCCEEEEEECCSCTTSCCBCCSCCEEE--TTEEEECCBCTT------------TCCBCEEEEEETTTCCEE
T ss_pred CCCCEeeeecCcCCCCCCccccCCcEEE--CCEEEEEeCCCc------------cCCCCEEEEEECCCCcEE
Confidence 888754222211 1100 1111122343 488998754321 123578888888888754
No 291
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.91 E-value=0.17 Score=43.45 Aligned_cols=83 Identities=11% Similarity=0.053 Sum_probs=52.3
Q ss_pred CCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEe-cCCCeEEEEEecCCCCCce-e-eecCCCCCceeeeCCC
Q 048181 177 STGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSE-FTGNRTLKYWLRGPRANSF-D-IINFQAKPHNIKRNPG 253 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d-~~~~~I~~~~~~~~~~g~~-~-~~~l~g~Pdgl~~d~~ 253 (310)
.++.+..+|..................++++++++.++++. ...+.|+.+++.. +.. . +.+-.+....+++.+
T Consensus 219 ~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~---~~~~~~l~gH~~~V~~l~~sp- 294 (318)
T 4ggc_A 219 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT---MAKVAELKGHTSRVLSLTMSP- 294 (318)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT---CCEEEEECCCSSCEEEEEECT-
T ss_pred CCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC---CcEEEEEcCCCCCEEEEEEcC-
Confidence 34566667766555544444455668899999999777654 4578888888753 221 1 122123356788998
Q ss_pred CCCcEEEEEec
Q 048181 254 LLQTFWEAAII 264 (310)
Q Consensus 254 ~dG~l~va~~~ 264 (310)
||.+.++...
T Consensus 295 -dg~~l~S~s~ 304 (318)
T 4ggc_A 295 -DGATVASAAA 304 (318)
T ss_dssp -TSSCEEEEET
T ss_pred -CCCEEEEEec
Confidence 9987666543
No 292
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.86 E-value=0.22 Score=43.89 Aligned_cols=157 Identities=8% Similarity=-0.018 Sum_probs=87.1
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce------EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCe
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF------TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQ 107 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~ 107 (310)
....+++|.|+|+++.+...++.|.-++..... .... .+.........++++ ++|+
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-----------------~~~~h~~~V~~v~~s-p~g~ 120 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA-----------------IIEGHENEVKGVAWS-NDGY 120 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEE-----------------EEC----CEEEEEEC-TTSC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEE-----------------EEcCCCCcEEEEEEC-CCCC
Confidence 346789999999988888889988888764211 1110 001112345688997 5676
Q ss_pred EEEE-eCCCcEEEEeCC-CCe-EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEE
Q 048181 108 LYIA-DAYSGLLVVGPN-GRL-ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSY 184 (310)
Q Consensus 108 LyVa-d~~~gi~~id~~-~~~-~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~ 184 (310)
++++ .....|..+|.. ++. .+.+ ....+ +-...+.++++|+ +.+++|-.. +|.+..+
T Consensus 121 ~las~s~D~~v~iwd~~~~~~~~~~~-~~~~~-h~~~v~~v~~~p~-~~~l~s~s~-----------------D~~i~iW 180 (330)
T 2hes_X 121 YLATCSRDKSVWIWETDESGEEYECI-SVLQE-HSQDVKHVIWHPS-EALLASSSY-----------------DDTVRIW 180 (330)
T ss_dssp EEEEEETTSCEEEEECCTTCCCCEEE-EEECC-CSSCEEEEEECSS-SSEEEEEET-----------------TSCEEEE
T ss_pred EEEEEeCCCEEEEEeccCCCCCeEEE-EEecc-CCCceEEEEECCC-CCEEEEEcC-----------------CCeEEEE
Confidence 6554 334447777763 221 1111 11111 1234678999994 877776432 3455555
Q ss_pred cCCCCe---EEEeecCCCCCceeEEccC--CCEEEEEecCCCeEEEEEec
Q 048181 185 NPRSSQ---VTVLLRNLTGPAGVAISVD--SSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 185 d~~~g~---~~~~~~~l~~pnGIa~~~d--g~~Lyv~d~~~~~I~~~~~~ 229 (310)
|..++. +..+...-..-..++|+|+ +. ++++-...+.|..+++.
T Consensus 181 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 181 KDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEE
T ss_pred ECCCCCeeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEec
Confidence 543332 1222222234578999998 44 45666667777777665
No 293
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.85 E-value=0.2 Score=43.35 Aligned_cols=190 Identities=9% Similarity=0.006 Sum_probs=101.2
Q ss_pred CcceEEEcc--CCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE
Q 048181 35 GGESIAFEP--VGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI 110 (310)
Q Consensus 35 ~Pegia~d~--~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV 110 (310)
...+++|.+ +|+++++...++.|..++...+. ..... ..........+++.+. .|.+++
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~-----------------~~~h~~~v~~v~~~p~~~g~~l~ 117 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV-----------------HAVHSASVNSVQWAPHEYGPMLL 117 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE-----------------ECCCSSCEEEEEECCGGGCSEEE
T ss_pred CeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE-----------------eecCCCceeEEEeCcCCCCcEEE
Confidence 345788864 48888888889999888876431 11100 0011223457888632 155544
Q ss_pred -EeCCCcEEEEeCCCCe---EEEeeccCCCccccCccceEEeCCC------------CeEEEEcCCCccCccceeEeeee
Q 048181 111 -ADAYSGLLVVGPNGRL---ATQLATGAEGQAFHFLDGLDVDQGT------------GVVYFTDASGVYDFRTIVKLNIT 174 (310)
Q Consensus 111 -ad~~~gi~~id~~~~~---~~~~~~~~~g~~~~~pndvavd~~~------------G~lyvtd~~~~~~~~~~~~~~~~ 174 (310)
+.....|..+|..++. ...+ .+ .-...+.++++|+. ++.+++-
T Consensus 118 s~s~d~~v~~wd~~~~~~~~~~~~----~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sg---------------- 176 (297)
T 2pm7_B 118 VASSDGKVSVVEFKENGTTSPIII----DA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTG---------------- 176 (297)
T ss_dssp EEETTSEEEEEEBCSSSCBCCEEE----EC-CSSCEEEEEECCCC------------CCEEEEE----------------
T ss_pred EEECCCcEEEEEecCCCceeeeee----ec-ccCccceEeecCCcccccccCCCCCCcceEEEE----------------
Confidence 4444446677765432 1111 11 11234566777631 2333332
Q ss_pred cCCCceEEEEcCCCCe----EE-EeecCCCCCceeEEccCC--CEEEEEecCCCeEEEEEecCCCCC-ceee---ecCCC
Q 048181 175 NDSTGRLLSYNPRSSQ----VT-VLLRNLTGPAGVAISVDS--SFLLVSEFTGNRTLKYWLRGPRAN-SFDI---INFQA 243 (310)
Q Consensus 175 ~~~~G~l~~~d~~~g~----~~-~~~~~l~~pnGIa~~~dg--~~Lyv~d~~~~~I~~~~~~~~~~g-~~~~---~~l~g 243 (310)
..+|.|..+|..+++ .. .+...-...+.++|+|++ ..++++-+..+.|..++++..... ...+ ...+.
T Consensus 177 -s~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~ 255 (297)
T 2pm7_B 177 -GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255 (297)
T ss_dssp -ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred -cCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCC
Confidence 234556555543332 11 222223346899999996 356777778888888887642111 1111 12233
Q ss_pred CCceeeeCCCCCCcEEEEEecC
Q 048181 244 KPHNIKRNPGLLQTFWEAAIIT 265 (310)
Q Consensus 244 ~Pdgl~~d~~~dG~l~va~~~~ 265 (310)
....+++.+ +|++.++....
T Consensus 256 ~v~~~~~s~--~g~~las~~~D 275 (297)
T 2pm7_B 256 VLWRASWSL--SGNVLALSGGD 275 (297)
T ss_dssp CEEEEEECS--SSCCEEEEETT
T ss_pred cEEEEEECC--CCCEEEEEcCC
Confidence 445678888 89876665443
No 294
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.81 E-value=0.42 Score=46.51 Aligned_cols=130 Identities=9% Similarity=0.043 Sum_probs=67.1
Q ss_pred EEEccCCCEEEEEeC-CCeEEEEEC-CCceEEeeeecCCCCccccCCCccccCCCCC-CceeeEEEecCCCe----EEEE
Q 048181 39 IAFEPVGGAFYTGVA-DGRILKYQA-PDGFTDFAFTTPTRSKAVCDGTTNLDLGPIC-RRTFGLALHYATRQ----LYIA 111 (310)
Q Consensus 39 ia~d~~G~l~~~d~~-~g~I~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~P~Gla~d~~~g~----LyVa 111 (310)
+++. +|. +|+... ++.|+.++. ..+.+.+......... ... ...+ ....|+++.+.+++ ||+.
T Consensus 58 P~v~-~g~-vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~-------~~~-~~~~~~~~~g~av~p~~g~~~~rV~v~ 127 (599)
T 1w6s_A 58 PLVV-DGK-MYIHTSFPNNTFALGLDDPGTILWQDKPKQNPA-------ARA-VACCDLVNRGLAYWPGDGKTPALILKT 127 (599)
T ss_dssp CEEE-TTE-EEEECSTTTCEEEEETTCTTSEEEEECCCCCGG-------GGG-GCSSCSCCCCCEEECCCSSSCCEEEEE
T ss_pred cEEE-CCE-EEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcc-------ccc-cccccccccceEEEecCCcceeEEEEE
Confidence 3443 455 555555 789999998 6555445432111000 000 0011 11246777222566 9998
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCc-cccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCe
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQ-AFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQ 190 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~-~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~ 190 (310)
.....|+.+|.++|+...-....... ........++. +|.+|+..... +...+|.|+.+|..+|+
T Consensus 128 t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~------------e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 128 QLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGA------------ELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCG------------GGTCCCEEEEEETTTCC
T ss_pred cCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEeccc------------ccCCCCeEEEEECCCCc
Confidence 76666999999888764221111100 00111122344 48898875432 11235788888888887
Q ss_pred EE
Q 048181 191 VT 192 (310)
Q Consensus 191 ~~ 192 (310)
..
T Consensus 194 ~~ 195 (599)
T 1w6s_A 194 QV 195 (599)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 295
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.78 E-value=0.015 Score=57.91 Aligned_cols=119 Identities=11% Similarity=0.013 Sum_probs=74.2
Q ss_pred eEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCcccc-CccceEEeCCCCe-EEEEcCCCccCccceeEeeeec
Q 048181 98 GLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFH-FLDGLDVDQGTGV-VYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~-~pndvavd~~~G~-lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
.+++. ++|.+++++ ...|..++.++++...+...-....+. ..++++++|+ |+ |.++..... +...
T Consensus 21 ~~~w~-~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd-g~~l~~~~~~~~---------~~r~ 88 (740)
T 4a5s_A 21 SLRWI-SDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD-GQFILLEYNYVK---------QWRH 88 (740)
T ss_dssp CEEEC-SSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT-SSEEEEEEEEEE---------CSSS
T ss_pred ccEEC-CCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCC-CCEEEEEECCee---------eEEE
Confidence 67885 678777766 445999999988766554322111111 2356899995 65 444332110 0011
Q ss_pred CCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 176 DSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
...+.++.+|..+++.+.+......-...+|||||+.|.++ ..+.|+..+..+
T Consensus 89 ~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~ 141 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPN 141 (740)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTT
T ss_pred ccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCC
Confidence 22477899999888876554433345688999999977666 346788877654
No 296
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.77 E-value=0.26 Score=48.41 Aligned_cols=183 Identities=9% Similarity=0.050 Sum_probs=92.9
Q ss_pred ceEEEccCCCE-EEEEeC------------CCeEEEEECCCceE--EeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 37 ESIAFEPVGGA-FYTGVA------------DGRILKYQAPDGFT--DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 37 egia~d~~G~l-~~~d~~------------~g~I~r~~~~g~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
.+++|.+||.. +|+... ..+|++++.+++.. ...... ......-.++++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~----------------~~~~~~~~~~~~ 234 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER----------------TGDPTTFLQSDL 234 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC----------------CCCTTCEEEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec----------------CCCCEEEEEEEE
Confidence 57899999974 444432 23488888764321 111100 001123347788
Q ss_pred ecCCCe-EEEEeCC----CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecC
Q 048181 102 HYATRQ-LYIADAY----SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITND 176 (310)
Q Consensus 102 d~~~g~-LyVad~~----~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~ 176 (310)
+ ++|+ |+++... ..|+.++..+++.+.+...... ..... .++ |.+|+.... ..
T Consensus 235 S-pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~-----~~~~~-~~~-g~l~~~s~~--------------~~ 292 (695)
T 2bkl_A 235 S-RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA-----KYEVH-AWK-DRFYVLTDE--------------GA 292 (695)
T ss_dssp C-TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC-----CEEEE-EET-TEEEEEECT--------------TC
T ss_pred C-CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc-----eEEEE-ecC-CcEEEEECC--------------CC
Confidence 6 5554 5444322 2488887766665555432221 11222 243 447775321 12
Q ss_pred CCceEEEEcCCCCe---EEEeecCC--CCCceeEEccCCCEEEEEecCC--CeEEEEEecCCCCCceeeecCC--CCCce
Q 048181 177 STGRLLSYNPRSSQ---VTVLLRNL--TGPAGVAISVDSSFLLVSEFTG--NRTLKYWLRGPRANSFDIINFQ--AKPHN 247 (310)
Q Consensus 177 ~~G~l~~~d~~~g~---~~~~~~~l--~~pnGIa~~~dg~~Lyv~d~~~--~~I~~~~~~~~~~g~~~~~~l~--g~Pdg 247 (310)
++++|+++|.++++ .+.+...- ..-.+++++ ++ .|+++.... .+|+.+++++. ..+...++ +...+
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~---~~~~l~~~~~~~v~~ 367 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGK---PVRTVQLPGVGAASN 367 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC---EEEECCCSSSSEECC
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCC---eeEEecCCCCeEEEE
Confidence 46789999987654 24443321 123678887 44 577766544 46777776542 11111122 22344
Q ss_pred eeeCCCCCC-cEEEEEec
Q 048181 248 IKRNPGLLQ-TFWEAAII 264 (310)
Q Consensus 248 l~~d~~~dG-~l~va~~~ 264 (310)
+.+++ +| .++++..+
T Consensus 368 ~~~s~--d~~~l~~~~ss 383 (695)
T 2bkl_A 368 LMGLE--DLDDAYYVFTS 383 (695)
T ss_dssp CBSCT--TCSEEEEEEEE
T ss_pred eecCC--CCCEEEEEEcC
Confidence 55666 66 45555444
No 297
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.77 E-value=0.0024 Score=58.29 Aligned_cols=194 Identities=9% Similarity=0.119 Sum_probs=79.3
Q ss_pred eEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeC-CCc
Q 048181 38 SIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADA-YSG 116 (310)
Q Consensus 38 gia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~-~~g 116 (310)
+++++ +..+|+...++.|+.++...+...+.... + .....| ++ .++++|++.. ...
T Consensus 4 sP~v~--~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------~-------~~~s~p---~~--~~g~~~v~~s~dg~ 60 (369)
T 2hz6_A 4 TVTLP--ETLLFVSTLDGSLHAVSKRTGSIKWTLKE---------D-------PVLQVP---TH--VEEPAFLPDPNDGS 60 (369)
T ss_dssp ----C--TTEEEEEETTSEEEEEETTTCCEEEEEEC---------C-------CSCCCC----------CCEEECTTTCC
T ss_pred CCeee--CCEEEEEcCCCEEEEEECCCCCEEEEecC---------C-------Cceecc---eE--cCCCEEEEeCCCCE
Confidence 44553 45577777899999999775544443210 0 111112 22 3566777643 334
Q ss_pred EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeec
Q 048181 117 LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLR 196 (310)
Q Consensus 117 i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~ 196 (310)
|+.+|.++|+...... ........ ...++.. ++.+|+.. .+|.|+.+|+.+|+..-.
T Consensus 61 l~a~d~~tG~~~w~~~-~~~~~~~~-~sp~~~~-~~~v~~g~------------------~dg~v~a~D~~tG~~~w~-- 117 (369)
T 2hz6_A 61 LYTLGSKNNEGLTKLP-FTIPELVQ-ASPCRSS-DGILYMGK------------------KQDIWYVIDLLTGEKQQT-- 117 (369)
T ss_dssp EEEC-----CCSEECS-CCHHHHHT-TCSCC------CCCCE------------------EEEEEEEECCC---------
T ss_pred EEEEECCCCceeeeee-ccCccccc-cCceEec-CCEEEEEe------------------CCCEEEEEECCCCcEEEE--
Confidence 8889987665321111 11000000 0112222 36666542 136799999888865322
Q ss_pred CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCC-CCceeeecCCCCCceeeeCC--CCCCcEEEEEecCCCCCCCCc
Q 048181 197 NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPR-ANSFDIINFQAKPHNIKRNP--GLLQTFWEAAIITRQPAGTPV 273 (310)
Q Consensus 197 ~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~-~g~~~~~~l~g~Pdgl~~d~--~~dG~l~va~~~~~~~~~~~~ 273 (310)
+..+..+.++|+++.||+.. ..+.|+.++....+ .-..+.... ...+++. ..++.+|++....
T Consensus 118 -~~~~~~~~~~p~~~~v~~~~-~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~~~~v~~~~~dg-------- 183 (369)
T 2hz6_A 118 -LSSAFADSLSPSTSLLYLGR-TEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDYKMSHFVSNGDG-------- 183 (369)
T ss_dssp ----------------EEEEE-EEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTCCCCEEEEETSC--------
T ss_pred -ecCCCcccccccCCEEEEEe-cCCEEEEEECCCCCEEEeEecccc----cCccccCCccccceEEEECCCC--------
Confidence 12223355667777788764 45677777764211 111111111 1122332 0037889887654
Q ss_pred eeeEEECC-CCcEEEEEecC
Q 048181 274 PIGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 274 ~~v~~~~~-~G~~~~~~~~p 292 (310)
.+..+|. +|+++-.....
T Consensus 184 -~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 184 -LVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp -EEEEECTTTCCEEEEEECS
T ss_pred -EEEEEECCCCcEEEEecCC
Confidence 6888996 68887766644
No 298
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.69 E-value=0.15 Score=44.58 Aligned_cols=160 Identities=11% Similarity=-0.026 Sum_probs=86.5
Q ss_pred CCcceEEEccCCCEEEEEeCCCeEEEEECCCce-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE-
Q 048181 34 FGGESIAFEPVGGAFYTGVADGRILKYQAPDGF-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI- 110 (310)
Q Consensus 34 ~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV- 110 (310)
..-.+++|+++|+++.+...++.|..++...+. ..+.. +......-..+++.++ ++++++
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~-----------------l~gH~~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIAD-----------------LRGHEGPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEE-----------------EECCSSCEEEEEECCGGGSSCEEE
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEE-----------------EcCCCccEEEEEeCCCCCCCEEEE
Confidence 345689999999988888889988888765332 11110 0011223457888422 355544
Q ss_pred EeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 111 ADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 111 ad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
+.....|...|..+++...... ..+ +-...+.++++|+. |.++++-.. +|.+..+|..++
T Consensus 77 ~s~D~~v~iWd~~~~~~~~~~~-~~~-h~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~~~ 137 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEKSHE-HAG-HDSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYTGE 137 (316)
T ss_dssp EETTSCEEEECCSSSCCCEEEE-ECC-CSSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEECSS
T ss_pred EECCCEEEEEECCCCcceEEEE-ccC-CCCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecCCC
Confidence 4444457778877653211111 111 12346789998841 555555432 345555554332
Q ss_pred -eEEEee---cCCCCCceeEEccCC----------------CEEEEEecCCCeEEEEEec
Q 048181 190 -QVTVLL---RNLTGPAGVAISVDS----------------SFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 190 -~~~~~~---~~l~~pnGIa~~~dg----------------~~Lyv~d~~~~~I~~~~~~ 229 (310)
...... .....-+.++|+|++ ..++++-...+.|..+++.
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~ 197 (316)
T 3bg1_A 138 GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE 197 (316)
T ss_dssp SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC
T ss_pred CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC
Confidence 121111 111234678888873 1255666667777777664
No 299
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.68 E-value=0.37 Score=44.08 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=60.1
Q ss_pred eeeEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeec
Q 048181 96 TFGLALHYATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITN 175 (310)
Q Consensus 96 P~Gla~d~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~ 175 (310)
...+.++ +..|+++.....|..+|..+++......... ........+++++ +.+++-.
T Consensus 322 v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~---~~l~s~~---------------- 379 (445)
T 2ovr_B 322 TSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPN-KHQSAVTCLQFNK---NFVITSS---------------- 379 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTT-SCSSCEEEEEECS---SEEEEEE----------------
T ss_pred EEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCC-CCCCCEEEEEECC---CEEEEEe----------------
Confidence 3456654 4455545444457788877655322221111 1122344566642 3333322
Q ss_pred CCCceEEEEcCCCCeEEEee------cCCCCCceeEEccCCCEEEEEecCCC----eEEEEEecC
Q 048181 176 DSTGRLLSYNPRSSQVTVLL------RNLTGPAGVAISVDSSFLLVSEFTGN----RTLKYWLRG 230 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~~~------~~l~~pnGIa~~~dg~~Lyv~d~~~~----~I~~~~~~~ 230 (310)
.+|.|..+|..+++..... ..-...+.++++|+|..|.++ ...+ +|..++++.
T Consensus 380 -~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 380 -DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG-SRNGTEETKLLVLDFDV 442 (445)
T ss_dssp -TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEE-CSSSSSCCEEEEEECCC
T ss_pred -CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEc-ccCCCCccEEEEEECCC
Confidence 2478888887777644332 122345789999998754444 3344 588888764
No 300
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.3 Score=42.94 Aligned_cols=156 Identities=16% Similarity=0.060 Sum_probs=85.0
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEe-
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIAD- 112 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad- 112 (310)
.-.+++++++ ++.+...++.|..++...+ ........ ..........+++. ++++++++-
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~---------------~~~h~~~v~~v~~s-p~~~~las~s 77 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD---------------ETAHKKAIRSVAWR-PHTSLLAAGS 77 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC---------------TTCCCSCEEEEEEC-TTSSEEEEEE
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe---------------cCCccCCEEEEEEC-CCCCEEEEEe
Confidence 4567788765 6777888899988887642 22111000 00012235678997 567665543
Q ss_pred CCCcEEEEeCCCCe-----EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 113 AYSGLLVVGPNGRL-----ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 113 ~~~gi~~id~~~~~-----~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
....|..++.+... ...+ ....+ +-...+.++++|+ |+.+++-.. +|.+..+|..
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~-~~~~~-h~~~V~~v~~sp~-g~~las~s~-----------------D~~v~iwd~~ 137 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLL-AIIEG-HENEVKGVAWSND-GYYLATCSR-----------------DKSVWIWETD 137 (330)
T ss_dssp TTSCEEEEEC-------CCCEEE-EEEC-----CEEEEEECTT-SCEEEEEET-----------------TSCEEEEECC
T ss_pred CCCcEEEEEcccCcCccccceeE-EEEcC-CCCcEEEEEECCC-CCEEEEEeC-----------------CCEEEEEecc
Confidence 33346666653211 1111 11122 2234678999994 877766432 3566666652
Q ss_pred -CC---eE-EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 188 -SS---QV-TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 188 -~g---~~-~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
.+ +. ..+...-...+.++|+|+++ ++++-+..+.|..++..
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDY 183 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECC
Confidence 11 11 22223334568999999998 55666667777777654
No 301
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.61 E-value=0.014 Score=49.56 Aligned_cols=135 Identities=15% Similarity=0.080 Sum_probs=78.8
Q ss_pred ceeeEEEecCCCeEEEEeCCCcEEEEeCCCC-------eEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccc
Q 048181 95 RTFGLALHYATRQLYIADAYSGLLVVGPNGR-------LATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRT 167 (310)
Q Consensus 95 ~P~Gla~d~~~g~LyVad~~~gi~~id~~~~-------~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~ 167 (310)
+...|+++ ++|.||+. ....++++++.+. ..+.+... ..+....+.+|+ +|.||...
T Consensus 42 ~~~~laf~-P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~----Gw~~F~a~~fD~-~G~LYav~--------- 105 (236)
T 1tl2_A 42 NFKFLFLS-PGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNG----GWNQFQFLFFDP-NGYLYAVS--------- 105 (236)
T ss_dssp TCSEEEEC-TTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECS----CGGGCSEEEECT-TSCEEEEE---------
T ss_pred cceeEEEC-CCccEEEE-eCCeEEEECCCCCCcccccccccEeccc----ccccceEEEECC-CCCEEEeC---------
Confidence 44589998 59999988 3334999998652 22222211 122246799999 59999872
Q ss_pred eeEeeeecCCCceEEEEcCCCC-e------EEEee-cCCCCCceeEEccCCCEEEEEecCCCeEEEEE-ecCCCCCce--
Q 048181 168 IVKLNITNDSTGRLLSYNPRSS-Q------VTVLL-RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYW-LRGPRANSF-- 236 (310)
Q Consensus 168 ~~~~~~~~~~~G~l~~~d~~~g-~------~~~~~-~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~-~~~~~~g~~-- 236 (310)
+|.|||+++-+. . .+.+- .+...-.-|.++|+|. ||.+. .++++|-. +.+ .+..
T Consensus 106 ----------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~--~~~~wl 170 (236)
T 1tl2_A 106 ----------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVS--NQDNWL 170 (236)
T ss_dssp ----------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSS--TTCCHH
T ss_pred ----------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCC--CCcccc
Confidence 378999987331 1 11111 1222237899999996 88887 66676522 211 1111
Q ss_pred ---ee-e-cCCCCCceeeeCCCCCCcEEEEE
Q 048181 237 ---DI-I-NFQAKPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 237 ---~~-~-~l~g~Pdgl~~d~~~dG~l~va~ 262 (310)
.. . .-...-.-+.+++ +|+||.+.
T Consensus 171 ~~~~~~g~~g~~~yr~l~f~~--~G~l~~v~ 199 (236)
T 1tl2_A 171 ARATKIGQGGWDTFKFLFFSS--VGTLFGVQ 199 (236)
T ss_dssp HHCEEEESSSGGGEEEEEECT--TSCEEEEE
T ss_pred cccceeccCCcceEEEEEECC--CCcEEEEe
Confidence 11 0 0000112256888 89998887
No 302
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.57 E-value=0.11 Score=48.21 Aligned_cols=159 Identities=11% Similarity=-0.005 Sum_probs=87.7
Q ss_pred CcceEEEccCCCEEEE----EeCCCeEEEEECCCc------e-EEeeeecCCCCccccCCCccccCCCCCCceeeEEEec
Q 048181 35 GGESIAFEPVGGAFYT----GVADGRILKYQAPDG------F-TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHY 103 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~----d~~~g~I~r~~~~g~------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~ 103 (310)
...+++|.++|+++++ ...++.|..++.... . ..+... ............+++++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~--------------~~~~~h~~~V~~v~~~p 159 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYH--------------KLLKDAGGMVIDMKWNP 159 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEE--------------ECCCSGGGSEEEEEECS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeee--------------eccCCCCCceEEEEECC
Confidence 4789999999997773 445677777764321 0 000000 00001123467899974
Q ss_pred CCCeEEEE-eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 104 ATRQLYIA-DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 104 ~~g~LyVa-d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
.++.++++ .....|..+|..++... .... + .-...+.++++++ |+.+++-. .+|.|.
T Consensus 160 ~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~--~-~~~~v~~v~wspd-g~~lasgs-----------------~dg~v~ 217 (434)
T 2oit_A 160 TVPSMVAVCLADGSIAVLQVTETVKV-CATL--P-STVAVTSVCWSPK-GKQLAVGK-----------------QNGTVV 217 (434)
T ss_dssp SCTTEEEEEETTSCEEEEEESSSEEE-EEEE--C-GGGCEEEEEECTT-SSCEEEEE-----------------TTSCEE
T ss_pred CCCCEEEEEECCCeEEEEEcCCCcce-eecc--C-CCCceeEEEEcCC-CCEEEEEc-----------------CCCcEE
Confidence 44666664 44444778888766332 1111 1 1234678999995 76555432 247788
Q ss_pred EEcCCCCeEEEeec-CCC-------CCceeEEccCCCEEEEEecCCC------eEEEEEecC
Q 048181 183 SYNPRSSQVTVLLR-NLT-------GPAGVAISVDSSFLLVSEFTGN------RTLKYWLRG 230 (310)
Q Consensus 183 ~~d~~~g~~~~~~~-~l~-------~pnGIa~~~dg~~Lyv~d~~~~------~I~~~~~~~ 230 (310)
.+|.+ ++...... ... ....|+|++++.++.+.....+ .+..+++..
T Consensus 218 iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 218 QYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred EEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 88876 43332221 111 3368889988765544444432 366666653
No 303
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.53 E-value=0.27 Score=44.69 Aligned_cols=199 Identities=14% Similarity=0.117 Sum_probs=100.2
Q ss_pred CCcceEEEcc--CCCEEEEEeCCC----eEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC--
Q 048181 34 FGGESIAFEP--VGGAFYTGVADG----RILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-- 104 (310)
Q Consensus 34 ~~Pegia~d~--~G~l~~~d~~~g----~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-- 104 (310)
....+|++|+ .+. +|+....+ .|++.+..+. ++.+..... ..............+-..|++++.
T Consensus 55 ~~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~------~~~~~~~~~~~~~~~i~~l~~~~~~~ 127 (394)
T 3b7f_A 55 HTIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEATRPPA------FNKAPEGETGRVVDHVFWLTPGHASE 127 (394)
T ss_dssp SEEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECSBCCC------CCCCC----CCCCCEEEEEEECCTTS
T ss_pred CceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECCcccc------CCCcccccccccccceeEEEeCCCCC
Confidence 3578999998 566 45555455 7888766553 443211000 000000000001123346888642
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEEEeeccC--C------------CccccCccceEEeCC-CCeEEEEcCCCccCcccee
Q 048181 105 TRQLYIADAYSGLLVVGPNGRLATQLATGA--E------------GQAFHFLDGLDVDQG-TGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 105 ~g~LyVad~~~gi~~id~~~~~~~~~~~~~--~------------g~~~~~pndvavd~~-~G~lyvtd~~~~~~~~~~~ 169 (310)
.+.||+.....+|++.+..+..-+.+.... . +........|++++. .+.+|+....
T Consensus 128 ~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~--------- 198 (394)
T 3b7f_A 128 PGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS--------- 198 (394)
T ss_dssp TTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET---------
T ss_pred CCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC---------
Confidence 688998765667998876654444432110 0 001122357888863 3678887432
Q ss_pred EeeeecCCCceEEEEcCCCCeEEEeecCC-------------CCCceeEEccC-CCEEEEEecCCCeEEEEEecCCCCCc
Q 048181 170 KLNITNDSTGRLLSYNPRSSQVTVLLRNL-------------TGPAGVAISVD-SSFLLVSEFTGNRTLKYWLRGPRANS 235 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~~~~~~~~l-------------~~pnGIa~~~d-g~~Lyv~d~~~~~I~~~~~~~~~~g~ 235 (310)
+.|++.+....+.+.+...+ .....|+++++ .+.||+.. .+.|++.+-.+ .+
T Consensus 199 ---------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G---~t 264 (394)
T 3b7f_A 199 ---------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRRE---GV 264 (394)
T ss_dssp ---------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTT---TE
T ss_pred ---------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCC---Cc
Confidence 34666654433333332211 11356888885 35788874 35577765332 22
Q ss_pred eee--ecCCC----CCceeeeCCCCCCcEEEEE
Q 048181 236 FDI--INFQA----KPHNIKRNPGLLQTFWEAA 262 (310)
Q Consensus 236 ~~~--~~l~g----~Pdgl~~d~~~dG~l~va~ 262 (310)
.+. ..++. +.-.|++++...+.||++.
T Consensus 265 W~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 265 WKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred ceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 222 22332 1124677621157899985
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.51 E-value=0.66 Score=44.87 Aligned_cols=72 Identities=15% Similarity=0.289 Sum_probs=42.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCC-ceeeEEEecCCCeEEEEeCCCcEEEEeC
Q 048181 44 VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICR-RTFGLALHYATRQLYIADAYSGLLVVGP 122 (310)
Q Consensus 44 ~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~P~Gla~d~~~g~LyVad~~~gi~~id~ 122 (310)
+|.+|+.. ..++|+.++...+.+.+........ .....+. ...|++++ +++||+......|+.+|.
T Consensus 68 ~g~vyv~~-~~~~v~AlD~~tG~~~W~~~~~~~~----------~~~~~~~~~~~g~a~~--~~~v~~~t~dg~l~AlD~ 134 (582)
T 1flg_A 68 DGVIYVTA-SYSRLFALDAKTGKRLWTYNHRLPD----------DIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNK 134 (582)
T ss_dssp TTEEEEEE-TTTEEEEEESSSCCEEEEEECCCCT----------TCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEES
T ss_pred CCEEEEEc-CCCCEEEEECCCCcEEEEEcCCCCc----------ccccccccCCCccEEE--CCEEEEEeCCCEEEEEEC
Confidence 55655544 4455999998755554443211100 0000111 12466774 789999877667999999
Q ss_pred CCCeEE
Q 048181 123 NGRLAT 128 (310)
Q Consensus 123 ~~~~~~ 128 (310)
++|+..
T Consensus 135 ~TG~~~ 140 (582)
T 1flg_A 135 NTGKVV 140 (582)
T ss_dssp SSCCEE
T ss_pred CCCCEE
Confidence 988764
No 305
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.41 Score=43.42 Aligned_cols=157 Identities=9% Similarity=0.026 Sum_probs=89.0
Q ss_pred CcceEE--EccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-E
Q 048181 35 GGESIA--FEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-A 111 (310)
Q Consensus 35 ~Pegia--~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-a 111 (310)
....++ +.+++.++++...++.|..++............ .........++++ +++++++ +
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------------~~h~~~v~~~~~s-~~~~~l~s~ 232 (437)
T 3gre_A 170 YAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN----------------SPRHGAVSSICID-EECCVLILG 232 (437)
T ss_dssp CEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC----------------CGGGCCEEEEEEC-TTSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc----------------CCCCCceEEEEEC-CCCCEEEEE
Confidence 344444 446788888888999999999864332211100 0012356689997 5666555 4
Q ss_pred eCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCC---CCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCC
Q 048181 112 DAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQG---TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRS 188 (310)
Q Consensus 112 d~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~---~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~ 188 (310)
.....|..+|...++....... ... ...+.+++.+. ++.++++-. .+|.|..+|..+
T Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~-~~~--~~v~~~~~~~~~s~~~~~l~s~~-----------------~dg~i~iwd~~~ 292 (437)
T 3gre_A 233 TTRGIIDIWDIRFNVLIRSWSF-GDH--APITHVEVCQFYGKNSVIVVGGS-----------------SKTFLTIWNFVK 292 (437)
T ss_dssp ETTSCEEEEETTTTEEEEEEBC-TTC--EEEEEEEECTTTCTTEEEEEEES-----------------TTEEEEEEETTT
T ss_pred cCCCeEEEEEcCCccEEEEEec-CCC--CceEEEEeccccCCCccEEEEEc-----------------CCCcEEEEEcCC
Confidence 4444488889877654322111 111 12345644431 355555543 246677777665
Q ss_pred CeEEEeecC---------------------------CCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 189 SQVTVLLRN---------------------------LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 189 g~~~~~~~~---------------------------l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
++....... ...-..++++ +++ ++++-...+.|+.+++..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTC
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCC
Confidence 553322211 0113568898 664 667777889999998864
No 306
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.18 Score=48.15 Aligned_cols=188 Identities=11% Similarity=-0.025 Sum_probs=98.8
Q ss_pred CcceEEEccC------CCEEEEEeCCCeEEEEECCCceE----EeeeecCCCCccccCCCccccCCCCCCceeeEEEecC
Q 048181 35 GGESIAFEPV------GGAFYTGVADGRILKYQAPDGFT----DFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA 104 (310)
Q Consensus 35 ~Pegia~d~~------G~l~~~d~~~g~I~r~~~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~ 104 (310)
...+++|.|+ +.++.+...++.|.-++...... .+....+ ...+.........+++. .
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p-----------~~~l~~h~~~v~sv~~s-~ 276 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP-----------SLTLSLADSLITTFDFL-S 276 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC-----------SEEECCTTTCEEEEEES-S
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc-----------eEEEEcCCCCEEEEEec-C
Confidence 4567899886 56777788888888887653210 0000000 00011112345678886 4
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeE--EEeeccCCCccccCccce--EEeCCCC-eEEEEcCCCccCccceeEeeeecCCCc
Q 048181 105 TRQLYIADAYSGLLVVGPNGRLA--TQLATGAEGQAFHFLDGL--DVDQGTG-VVYFTDASGVYDFRTIVKLNITNDSTG 179 (310)
Q Consensus 105 ~g~LyVad~~~gi~~id~~~~~~--~~~~~~~~g~~~~~pndv--avd~~~G-~lyvtd~~~~~~~~~~~~~~~~~~~~G 179 (310)
++.|+.+.....|..+|..++.. ..+. + +-...+++ +..+ +| ++++|-+. +|
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~----~-H~~~V~sv~~~~s~-~g~~~laS~S~-----------------D~ 333 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQ----V-HDSYILSVSTAYSD-FEDTVVSTVAV-----------------DG 333 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEE----C-SSSCEEEEEEECCT-TSCCEEEEEET-----------------TS
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEee----c-ccccEEEEEEEcCC-CCCeEEEEecc-----------------CC
Confidence 56665555444577788775421 1111 1 11234566 3455 46 67666432 46
Q ss_pred eEEEEcCCCCeEE-EeecCCC--CCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCCCCCceeeeCCCCCC
Q 048181 180 RLLSYNPRSSQVT-VLLRNLT--GPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQAKPHNIKRNPGLLQ 256 (310)
Q Consensus 180 ~l~~~d~~~g~~~-~~~~~l~--~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~g~Pdgl~~d~~~dG 256 (310)
.+..+|..+++.. .+..... ..+.++|+|+++. +++-...+.|..+++..... ...+.+-.+....+++.+ +|
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp--~g 409 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFA-VHPLVSRETTITAIGVSR--LH 409 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTC-CEEEEECSSCEEEEECCS--SC
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccc-ceeeecCCCceEEEEeCC--CC
Confidence 7777776544321 1111121 2468999999984 66666677787777653211 111222222345566666 66
Q ss_pred cEEEE
Q 048181 257 TFWEA 261 (310)
Q Consensus 257 ~l~va 261 (310)
.+.++
T Consensus 410 ~~l~S 414 (524)
T 2j04_B 410 PMVLA 414 (524)
T ss_dssp CBCEE
T ss_pred CeEEE
Confidence 54444
No 307
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.15 E-value=0.087 Score=48.92 Aligned_cols=82 Identities=2% Similarity=-0.165 Sum_probs=54.7
Q ss_pred CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCceee
Q 048181 199 TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIG 276 (310)
Q Consensus 199 ~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v 276 (310)
...+.++|+|+...++++-+..+.|..+++... .... .........+++++ +|++.++.... +.+
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~~~~~~~~~~~v~~v~wsp--dg~~lasgs~d--------g~v 216 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VKVCATLPSTVAVTSVCWSP--KGKQLAVGKQN--------GTV 216 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EEEEEEECGGGCEEEEEECT--TSSCEEEEETT--------SCE
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cceeeccCCCCceeEEEEcC--CCCEEEEEcCC--------CcE
Confidence 356899999984447777778889999988642 2211 22223467899999 99755544433 267
Q ss_pred EEECCCCcEEEEEecCC
Q 048181 277 QRISAFGAVLDTISFEA 293 (310)
Q Consensus 277 ~~~~~~G~~~~~~~~p~ 293 (310)
..+|.+|+....+..+.
T Consensus 217 ~iwd~~~~~~~~~~~~~ 233 (434)
T 2oit_A 217 VQYLPTLQEKKVIPCPP 233 (434)
T ss_dssp EEECTTCCEEEEECCCT
T ss_pred EEEccCCcccccccCCc
Confidence 88888887777766654
No 308
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.89 E-value=0.2 Score=47.87 Aligned_cols=151 Identities=10% Similarity=0.014 Sum_probs=89.3
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCc-e--EEeeeecCCCCccccCCCccccCCCCCCceeeE--EEecCCC-eE
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDG-F--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGL--ALHYATR-QL 108 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gl--a~d~~~g-~L 108 (310)
...+++|.+++ .++++..+|.|..++...+ . ..+. .....-..+ ++ .++| .+
T Consensus 268 ~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~--------------------~H~~~V~sv~~~~-s~~g~~~ 325 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ--------------------VHDSYILSVSTAY-SDFEDTV 325 (524)
T ss_dssp CEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE--------------------CSSSCEEEEEEEC-CTTSCCE
T ss_pred CEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee--------------------cccccEEEEEEEc-CCCCCeE
Confidence 35678888754 6888889999999997632 1 1111 111233466 34 3566 67
Q ss_pred EEEeCCCc-EEEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcC
Q 048181 109 YIADAYSG-LLVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNP 186 (310)
Q Consensus 109 yVad~~~g-i~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~ 186 (310)
+++-...+ |...|..+++. ..+..... ....+.++++|+ +..+++-.. ++.+..+|.
T Consensus 326 laS~S~D~tvklWD~~~~~~~~~~~~~~~---~~~v~~v~fsp~-~~~l~s~~~-----------------d~tv~lwd~ 384 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTKTTVSRFR---GSNLVPVVYCPQ-IYSYIYSDG-----------------ASSLRAVPS 384 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHCEEEEECS---CCSCCCEEEETT-TTEEEEECS-----------------SSEEEEEET
T ss_pred EEEeccCCeEEEEECCCCCcccccccccc---cCcccceEeCCC-cCeEEEeCC-----------------CCcEEEEEC
Confidence 66544434 77778765432 11111111 112467999994 777766432 245666676
Q ss_pred CCCeE-EEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 187 RSSQV-TVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 187 ~~g~~-~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
.++.. ..+.......+.|+|+|+|+. +++-+..+.|..+++.
T Consensus 385 ~~~~~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 385 RAAFAVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLIITNAA 427 (524)
T ss_dssp TCTTCCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEECCBSC
T ss_pred cccccceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEEEech
Confidence 55543 333344445689999999984 5666778888877764
No 309
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.77 E-value=0.83 Score=41.36 Aligned_cols=145 Identities=8% Similarity=0.084 Sum_probs=74.8
Q ss_pred ceeeEEEec-CCCeEEEEeCCC----cEEEEeCCCCeEEEeecc--CCCc-------cccCccceEEeCC--CCeEEEEc
Q 048181 95 RTFGLALHY-ATRQLYIADAYS----GLLVVGPNGRLATQLATG--AEGQ-------AFHFLDGLDVDQG--TGVVYFTD 158 (310)
Q Consensus 95 ~P~Gla~d~-~~g~LyVad~~~----gi~~id~~~~~~~~~~~~--~~g~-------~~~~pndvavd~~--~G~lyvtd 158 (310)
....|++|+ ..++||++-... +|++.+..+..-+.+... +... .+.....+++++. .+.+|+..
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~ 135 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT 135 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe
Confidence 456889983 268899875433 588876554433443221 1111 1112335778752 47888853
Q ss_pred CCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecC-----------------CC--CCceeEEccC-CCEEEEEec
Q 048181 159 ASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRN-----------------LT--GPAGVAISVD-SSFLLVSEF 218 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~-----------------l~--~pnGIa~~~d-g~~Lyv~d~ 218 (310)
. .+.|++.+....+.+.+... .. .-..|+++|. .+.||+...
T Consensus 136 ~------------------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~ 197 (394)
T 3b7f_A 136 S------------------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS 197 (394)
T ss_dssp E------------------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE
T ss_pred c------------------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC
Confidence 2 24578776543343433211 00 1136888873 446888754
Q ss_pred CCCeEEEEEecCCCCCceee--ec-----CC-------CCCceeeeCCCCC--CcEEEEEe
Q 048181 219 TGNRTLKYWLRGPRANSFDI--IN-----FQ-------AKPHNIKRNPGLL--QTFWEAAI 263 (310)
Q Consensus 219 ~~~~I~~~~~~~~~~g~~~~--~~-----l~-------g~Pdgl~~d~~~d--G~l~va~~ 263 (310)
. +.|++..-.| .+.+. .. +| .....|++++ + +.||++..
T Consensus 198 ~-ggl~~s~DgG---~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~--~~~~~l~vg~~ 252 (394)
T 3b7f_A 198 S-GGVFESTDAG---TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHP--AAPDILYQQNH 252 (394)
T ss_dssp T-BEEEEESSTT---SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECS--SSTTEEEEEET
T ss_pred C-CCEEEECCCC---CCceECCCCccccccCCCccccCcceeEEEECC--CCCCEEEEEcC
Confidence 3 3466654322 12221 11 11 0134577877 5 78998764
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.68 E-value=1 Score=39.73 Aligned_cols=188 Identities=11% Similarity=0.008 Sum_probs=96.2
Q ss_pred cceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 36 GESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
+.++++.+++.+|.+. ..+.|+|-...|+ ++.... .......+++++ +++++|++...
T Consensus 124 ~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~-------------------~~~~~~~~~~~~-~~~~~~~~g~~ 182 (327)
T 2xbg_A 124 PRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQ-------------------EAIGVMRNLNRS-PSGEYVAVSSR 182 (327)
T ss_dssp EEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEEC-------------------SCCCCEEEEEEC-TTSCEEEEETT
T ss_pred eEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeec-------------------CCCcceEEEEEc-CCCcEEEEECC
Confidence 4567766666655444 4667777654442 443220 111234578886 57888876555
Q ss_pred CcEEEEeCC-CCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE-E
Q 048181 115 SGLLVVGPN-GRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV-T 192 (310)
Q Consensus 115 ~gi~~id~~-~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~-~ 192 (310)
..+++-+.. +..-+.+.. .. -....++++++ +|++|+... .|.+++.+.+.|+. +
T Consensus 183 G~~~~S~d~gG~tW~~~~~-~~---~~~~~~~~~~~-~g~~~~~~~------------------~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 183 GSFYSTWEPGQTAWEPHNR-TT---SRRLHNMGFTP-DGRLWMIVN------------------GGKIAFSDPDNSENWG 239 (327)
T ss_dssp SSEEEEECTTCSSCEEEEC-CS---SSCEEEEEECT-TSCEEEEET------------------TTEEEEEETTEEEEEC
T ss_pred CcEEEEeCCCCCceeECCC-CC---CCccceeEECC-CCCEEEEeC------------------CceEEEecCCCCCeeE
Confidence 457776533 222233321 11 12456788888 488987643 24555553221221 1
Q ss_pred EeecC-CC---CCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-e---cCCCCCceeeeCCCCCCcEEEEEec
Q 048181 193 VLLRN-LT---GPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-I---NFQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 193 ~~~~~-l~---~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~---~l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.+... +. .-..|++++++. +|++-. .+.|++ ..++.. +.+. . .++..-..+.++. ++.+|++...
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i~~-S~DgG~--tW~~~~~~~~~~~~~~~v~~~~--~~~~~~~G~~ 312 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGALLC-SQDGGQ--TWQQDVDVKKVPSNFYKILFFS--PDQGFILGQK 312 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCEEE-ESSTTS--SCEECGGGTTSSSCCCEEEEEE--TTEEEEECST
T ss_pred eccCCcccCCcceEEEEecCCCE-EEEEeC-CCeEEE-eCCCCc--ccEEcCccCCCCCCeEEEEEEC--CCceEEEcCC
Confidence 11111 11 124677887765 666643 455543 334321 2222 1 1233345677766 6777766554
Q ss_pred CCCCCCCCceeeEEECCCC
Q 048181 265 TRQPAGTPVPIGQRISAFG 283 (310)
Q Consensus 265 ~~~~~~~~~~~v~~~~~~G 283 (310)
+ .+.+++.+.
T Consensus 313 G---------~i~~~~~~~ 322 (327)
T 2xbg_A 313 G---------ILLRYVTDL 322 (327)
T ss_dssp T---------EEEEECCCC
T ss_pred c---------eEEEEcCcc
Confidence 3 677777654
No 311
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.68 E-value=0.87 Score=38.80 Aligned_cols=161 Identities=7% Similarity=-0.022 Sum_probs=88.8
Q ss_pred CCCcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEE-E
Q 048181 33 AFGGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYI-A 111 (310)
Q Consensus 33 ~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyV-a 111 (310)
......+++.++|+++++...++.|..++...+...... ........+....+++.+.+..++. +
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~~~~ 215 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP--------------LQTFTQHQGAVKAVAWCPWQSNVLATG 215 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCC--------------SEEECCCCSCEEEEEECTTSTTEEEEE
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccc--------------eeeecccCCceEEEEecCCCCcEEEEE
Confidence 345677888889998888888898888876532110000 0000111223345666534444443 3
Q ss_pred eCC-Cc-EEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCC
Q 048181 112 DAY-SG-LLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSS 189 (310)
Q Consensus 112 d~~-~g-i~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g 189 (310)
... .+ |...+............ ......+++.+....++++.. ..+|.|..+|..++
T Consensus 216 ~~~~~~~i~lwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~sg----------------~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 216 GGTSDRHIRIWNVCSGACLSAVDA-----HSQVCSILWSPHYKELISGHG----------------FAQNQLVIWKYPTM 274 (318)
T ss_dssp ECTTTCEEEEEETTTCCEEEEEEC-----SSCEEEEEEETTTTEEEEEEC----------------TTTCCEEEEETTTC
T ss_pred ecCCCCEEEEEecccccccccccc-----eeeeeeeeecccccceEEEEE----------------cCCCEEEEEECCCC
Confidence 322 23 55566665443322111 122456777775344443321 13577888887776
Q ss_pred eEEEeecC-CCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 190 QVTVLLRN-LTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 190 ~~~~~~~~-l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
+......+ -..-+.|+|+|||++ +++-...+.|..+++.
T Consensus 275 ~~~~~l~gH~~~V~~l~~spdg~~-l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 275 AKVAELKGHTSRVLSLTMSPDGAT-VASAAADETLRLWRCF 314 (318)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSC-EEEEETTTEEEEECCS
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCE-EEEEecCCeEEEEECC
Confidence 65433332 334588999999984 5566677777777654
No 312
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.26 E-value=1.5 Score=38.87 Aligned_cols=72 Identities=10% Similarity=0.041 Sum_probs=47.7
Q ss_pred CccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCce-EEEEcCCCCeEEEeec---CCCCCceeEEccCCCEEEEE
Q 048181 141 FLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGR-LLSYNPRSSQVTVLLR---NLTGPAGVAISVDSSFLLVS 216 (310)
Q Consensus 141 ~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~-l~~~d~~~g~~~~~~~---~l~~pnGIa~~~dg~~Lyv~ 216 (310)
..+.++++| +|++.+|-+ .+|. +..+|..+++...... .-..-+.++|+|||++ +++
T Consensus 197 ~v~~~~~s~-~g~~l~s~s-----------------~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~-l~s 257 (355)
T 3vu4_A 197 PIKMVRLNR-KSDMVATCS-----------------QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSK-LAV 257 (355)
T ss_dssp CEEEEEECT-TSSEEEEEE-----------------TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCE-EEE
T ss_pred ceEEEEECC-CCCEEEEEe-----------------CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCE-EEE
Confidence 345677777 366655533 3476 7778877765543333 2345689999999984 556
Q ss_pred ecCCCeEEEEEecCC
Q 048181 217 EFTGNRTLKYWLRGP 231 (310)
Q Consensus 217 d~~~~~I~~~~~~~~ 231 (310)
-+..+.|..+++...
T Consensus 258 ~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 258 VSDKWTLHVFEIFND 272 (355)
T ss_dssp EETTCEEEEEESSCC
T ss_pred EECCCEEEEEEccCC
Confidence 667788888888643
No 313
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.19 E-value=0.97 Score=40.76 Aligned_cols=52 Identities=13% Similarity=0.043 Sum_probs=32.1
Q ss_pred CCCceEEEEcCCCCeEEE-eecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 176 DSTGRLLSYNPRSSQVTV-LLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 176 ~~~G~l~~~d~~~g~~~~-~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
..+|.|..+|..+++... ....-..-+.++|+|||++|.++. .+.+..+.+.
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as--~~Gv~lvrL~ 388 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLM 388 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE--SSEEEEEEEG
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEe
Confidence 346888888877664432 222223347999999999766553 3445545544
No 314
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.18 E-value=2.7 Score=41.42 Aligned_cols=142 Identities=13% Similarity=0.169 Sum_probs=75.1
Q ss_pred eeeEEEecCCCe-EEEEeC-----CCcEEEEeCCCC--e-EEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcc
Q 048181 96 TFGLALHYATRQ-LYIADA-----YSGLLVVGPNGR--L-ATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFR 166 (310)
Q Consensus 96 P~Gla~d~~~g~-LyVad~-----~~gi~~id~~~~--~-~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~ 166 (310)
-.++.++ ++|+ |+++.. ...|+.+|.+++ + .+.+...... . ... ++++++.||+.....
T Consensus 270 ~~~~~~S-pDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~---~~~-~~~dg~~l~~~s~~~----- 337 (741)
T 1yr2_A 270 GHGASVS-SDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA--Q---WDF-VDGVGDQLWFVSGDG----- 337 (741)
T ss_dssp EEEEEEC-TTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS--C---EEE-EEEETTEEEEEECTT-----
T ss_pred EEEEEEC-CCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc--e---EEE-EeccCCEEEEEECCC-----
Confidence 3577886 5664 544432 235888888776 4 4444332211 1 111 234456777754321
Q ss_pred ceeEeeeecCCCceEEEEcCCCC--eEEEeecCCC-CCceeEEccCCCEEEEEecCCC--eEEEEEecCCCCCceeeecC
Q 048181 167 TIVKLNITNDSTGRLLSYNPRSS--QVTVLLRNLT-GPAGVAISVDSSFLLVSEFTGN--RTLKYWLRGPRANSFDIINF 241 (310)
Q Consensus 167 ~~~~~~~~~~~~G~l~~~d~~~g--~~~~~~~~l~-~pnGIa~~~dg~~Lyv~d~~~~--~I~~~~~~~~~~g~~~~~~l 241 (310)
.++++|+++|.+++ +.+.+..... ...+++++ ++.|+++....+ +|+.+++++. ..+...+
T Consensus 338 ---------~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~---~~~~l~~ 403 (741)
T 1yr2_A 338 ---------APLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGK---PAGAVSL 403 (741)
T ss_dssp ---------CTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSC---EEEECBC
T ss_pred ---------CCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC---ceeeccC
Confidence 24578999998763 4455443221 23466776 446777765444 6777776542 1211222
Q ss_pred C--CCCceeeeCCCCCCc-EEEEEecC
Q 048181 242 Q--AKPHNIKRNPGLLQT-FWEAAIIT 265 (310)
Q Consensus 242 ~--g~Pdgl~~d~~~dG~-l~va~~~~ 265 (310)
+ +...++.+++ +|. |+++....
T Consensus 404 ~~~~~v~~~~~s~--d~~~l~~~~ss~ 428 (741)
T 1yr2_A 404 PGIGSASGLSGRP--GDRHAYLSFSSF 428 (741)
T ss_dssp SSSCEEEEEECCB--TCSCEEEEEEET
T ss_pred CCCeEEEEeecCC--CCCEEEEEEcCC
Confidence 2 3345666776 664 66554443
No 315
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.76 E-value=2.3 Score=38.53 Aligned_cols=192 Identities=10% Similarity=0.014 Sum_probs=97.9
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCCCcEEE
Q 048181 40 AFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAYSGLLV 119 (310)
Q Consensus 40 a~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~~gi~~ 119 (310)
++..+|+.+++...++.|..++...+...... .........++++ +..|+.+.....|..
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~------------------~~h~~~v~~l~~~--~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRIL------------------TGHTGSVLCLQYD--ERVIITGSSDSTVRV 197 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEE------------------CCCSSCEEEEECC--SSEEEEEETTSCEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEE------------------cCCCCcEEEEEEC--CCEEEEEcCCCeEEE
Confidence 44457888888889999999987643221111 0111233456652 344444544445888
Q ss_pred EeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEE----Eee
Q 048181 120 VGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVT----VLL 195 (310)
Q Consensus 120 id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~----~~~ 195 (310)
+|.++++...... + +-.....+++++ +.++.+. .+|.|..+|..+++.. ...
T Consensus 198 wd~~~~~~~~~~~---~-h~~~v~~l~~~~--~~l~s~s------------------~dg~i~vwd~~~~~~~~~~~~~~ 253 (435)
T 1p22_A 198 WDVNTGEMLNTLI---H-HCEAVLHLRFNN--GMMVTCS------------------KDRSIAVWDMASPTDITLRRVLV 253 (435)
T ss_dssp EESSSCCEEEEEC---C-CCSCEEEEECCT--TEEEEEE------------------TTSCEEEEECSSSSCCEEEEEEC
T ss_pred EECCCCcEEEEEc---C-CCCcEEEEEEcC--CEEEEee------------------CCCcEEEEeCCCCCCceeeeEec
Confidence 8887765432221 1 112344566653 4443332 2466777776554321 222
Q ss_pred cCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCCce
Q 048181 196 RNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTPVP 274 (310)
Q Consensus 196 ~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~ 274 (310)
..-...+.+++ +++.| ++-+..+.|..+++.... .... ..-......+.++. ..+.++...+
T Consensus 254 ~~~~~v~~~~~--~~~~l-~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg--------- 316 (435)
T 1p22_A 254 GHRAAVNVVDF--DDKYI-VSASGDRTIKVWNTSTCE--FVRTLNGHKRGIACLQYRD---RLVVSGSSDN--------- 316 (435)
T ss_dssp CCSSCEEEEEE--ETTEE-EEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEEET---TEEEEEETTS---------
T ss_pred CCCCcEEEEEe--CCCEE-EEEeCCCeEEEEECCcCc--EEEEEcCCCCcEEEEEeCC---CEEEEEeCCC---------
Confidence 22223456666 56644 555667889888875321 1111 21122234455543 2334443332
Q ss_pred eeEEECC-CCcEEEEEecC
Q 048181 275 IGQRISA-FGAVLDTISFE 292 (310)
Q Consensus 275 ~v~~~~~-~G~~~~~~~~p 292 (310)
.+..+|. .|+.+..+...
T Consensus 317 ~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp CEEEEETTTCCEEEEECCC
T ss_pred eEEEEECCCCCEEEEEeCC
Confidence 5666674 46666666543
No 316
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.38 E-value=1.9 Score=42.78 Aligned_cols=154 Identities=12% Similarity=0.019 Sum_probs=79.2
Q ss_pred cceEEEc-cCCC-EEEEEeCCC----eEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeE
Q 048181 36 GESIAFE-PVGG-AFYTGVADG----RILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQL 108 (310)
Q Consensus 36 Pegia~d-~~G~-l~~~d~~~g----~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~L 108 (310)
-.+++|. |||+ +.|+...+| +|+.++.+++ ... . ........++++.+++..|
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~-------------------~~~~~~~~~~~WspDg~~l 235 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-A-------------------DKVSGTNGEIVWGPDHTSL 235 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-C-------------------CCEEEECSCCEECSSTTEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-C-------------------ccccCceeeEEEecCCCEE
Confidence 3457888 8886 445544333 3777777654 210 0 0000012356776333366
Q ss_pred EEEeCC-----CcEEEEeCCCCeE--EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 109 YIADAY-----SGLLVVGPNGRLA--TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 109 yVad~~-----~gi~~id~~~~~~--~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
|++... ..|++++..++.. ..+....+ .. +--++.+++++..|+++.... ....|
T Consensus 236 ~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~-~~--~~~~~~~SpDg~~l~~~~~~~---------------~~~~l 297 (751)
T 2xe4_A 236 FYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN-PL--FSAFMYKAADTNTLCIGSQSP---------------ETAEV 297 (751)
T ss_dssp EEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC-TT--CEEEEEECTTSSEEEEEEECS---------------SCEEE
T ss_pred EEEEECCCCCCCEEEEEECCCCchhcEEEEecCC-Cc--eEEEEEECCCCCEEEEEecCC---------------CCceE
Confidence 655321 2488888876532 22222111 12 224678888533455553221 13468
Q ss_pred EEEcCCCC--eE--EEeecCCCCCceeEEccC---CCEEEEE-ec---CCCeEEEEEecC
Q 048181 182 LSYNPRSS--QV--TVLLRNLTGPAGVAISVD---SSFLLVS-EF---TGNRTLKYWLRG 230 (310)
Q Consensus 182 ~~~d~~~g--~~--~~~~~~l~~pnGIa~~~d---g~~Lyv~-d~---~~~~I~~~~~~~ 230 (310)
+.+|.+++ +. +.+... ..+..++++ |+.||+. +. .+.+|+++++++
T Consensus 298 ~~~d~~~~~~~~~~~~l~~~---~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 298 HLLDLRKGNAHNTLEIVRPR---EKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEESSSCTTCCCEEESSCC---CTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEECCCCCCCceeEEeecC---CCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 88887654 33 444432 234445554 7766665 33 345899998764
No 317
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.16 E-value=3.2 Score=37.62 Aligned_cols=206 Identities=11% Similarity=0.060 Sum_probs=103.6
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
...+++++ ++++++...++.|..++...+...... .........++++ ++.++++...
T Consensus 161 ~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~------------------~~h~~~v~~~~~~--~~~l~s~s~d 218 (445)
T 2ovr_B 161 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTL------------------YGHTSTVRCMHLH--EKRVVSGSRD 218 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEE------------------CCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEE------------------CCCCCcEEEEEec--CCEEEEEeCC
Confidence 34455554 456677777777777776643221110 0111233466664 4556555555
Q ss_pred CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe
Q 048181 115 SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL 194 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~ 194 (310)
..|..+|..+++....... .....+.++++ +..++.+. .+|.+..+|..+++....
T Consensus 219 g~i~~wd~~~~~~~~~~~~----~~~~v~~~~~~--~~~l~~~~------------------~dg~i~iwd~~~~~~~~~ 274 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG----HVAAVRCVQYD--GRRVVSGA------------------YDFMVKVWDPETETCLHT 274 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC----CSSCEEEEEEC--SSCEEEEE------------------TTSCEEEEEGGGTEEEEE
T ss_pred CEEEEEECCCCcEEEEEcC----CcccEEEEEEC--CCEEEEEc------------------CCCEEEEEECCCCcEeEE
Confidence 5577778776543322211 11223455553 23333332 246777777766654333
Q ss_pred ec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee-ecCCCCCceeeeCCCCCCcEEEEEecCCCCCCCC
Q 048181 195 LR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI-INFQAKPHNIKRNPGLLQTFWEAAIITRQPAGTP 272 (310)
Q Consensus 195 ~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~-~~l~g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~ 272 (310)
.. .-.....+++ +++++ ++-...+.|..+++.... .... ..-......+.++. ++.++....
T Consensus 275 ~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~----~~l~~~~~d------- 338 (445)
T 2ovr_B 275 LQGHTNRVYSLQF--DGIHV-VSGSLDTSIRVWDVETGN--CIHTLTGHQSLTSGMELKD----NILVSGNAD------- 338 (445)
T ss_dssp ECCCSSCEEEEEE--CSSEE-EEEETTSCEEEEETTTCC--EEEEECCCCSCEEEEEEET----TEEEEEETT-------
T ss_pred ecCCCCceEEEEE--CCCEE-EEEeCCCeEEEEECCCCC--EEEEEcCCcccEEEEEEeC----CEEEEEeCC-------
Confidence 32 2223456666 67754 455567888888875321 1111 11122334455543 444443332
Q ss_pred ceeeEEECC-CCcEEEEEecCCCccccceeEEE
Q 048181 273 VPIGQRISA-FGAVLDTISFEAQYSTTPISEVQ 304 (310)
Q Consensus 273 ~~~v~~~~~-~G~~~~~~~~p~~~~~~~~t~~~ 304 (310)
+.+..+|. +|+.+..+..+.. +...|+.+.
T Consensus 339 -g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~ 369 (445)
T 2ovr_B 339 -STVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQ 369 (445)
T ss_dssp -SCEEEEETTTCCEEEEECSTTS-CSSCEEEEE
T ss_pred -CeEEEEECCCCcEEEEEccCCC-CCCCEEEEE
Confidence 25666774 5777777766543 334555544
No 318
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.35 E-value=4.3 Score=36.39 Aligned_cols=79 Identities=9% Similarity=0.015 Sum_probs=46.2
Q ss_pred CCCCCCcceEEEcc--------CCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 30 PPKAFGGESIAFEP--------VGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 30 ~~~~~~Pegia~d~--------~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
.|.-..-.+++|.| +|+++.+...++.|.-++...+....... ........+++
T Consensus 133 ~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~------------------~~~~~v~~v~~ 194 (393)
T 4gq1_A 133 SGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY------------------PLSSPGISVQF 194 (393)
T ss_dssp TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE------------------ECSSCEEEEEE
T ss_pred CCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec------------------CCCCCcEEEEE
Confidence 33334567889976 78888888888988888864332211100 11223457888
Q ss_pred ecCCCeEEE-EeCCCcEEEEeCCCCe
Q 048181 102 HYATRQLYI-ADAYSGLLVVGPNGRL 126 (310)
Q Consensus 102 d~~~g~LyV-ad~~~gi~~id~~~~~ 126 (310)
++.++++++ +.....|..+|..+++
T Consensus 195 ~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 195 RPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred CCCCCceEEecCCCCEEEEEECCCCc
Confidence 744444444 4444447777876654
No 319
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.77 E-value=0.4 Score=46.09 Aligned_cols=90 Identities=9% Similarity=0.061 Sum_probs=62.4
Q ss_pred EEEEcCCC----C-eEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCC------CC-C--ceeeec--CCCC
Q 048181 181 LLSYNPRS----S-QVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGP------RA-N--SFDIIN--FQAK 244 (310)
Q Consensus 181 l~~~d~~~----g-~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~------~~-g--~~~~~~--l~g~ 244 (310)
+-.+|... + .+...+.--..|-|+-++|||++++++.....++.+|++..- +. . ...+.. +.-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 55677643 1 233444455689999999999999999999999999997620 00 0 000111 2235
Q ss_pred CceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEEC
Q 048181 245 PHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRIS 280 (310)
Q Consensus 245 Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~ 280 (310)
|-..++|. +|+.|.+++.-. +|+++|
T Consensus 380 PlHt~Fd~--~G~aYTtlfidS--------qvvkWn 405 (638)
T 3sbq_A 380 PLHTTFDG--RGNAYTTLFIDS--------QVVKWN 405 (638)
T ss_dssp EEEEEECS--SSEEEEEETTTT--------EEEEEE
T ss_pred ccEEEECC--CCceEeeeeecc--------eEEEEe
Confidence 99999999 999999998763 566655
No 320
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.44 E-value=3.3 Score=37.13 Aligned_cols=25 Identities=8% Similarity=0.202 Sum_probs=19.0
Q ss_pred CEEEEEeCCCeEEEEECCCceEEee
Q 048181 46 GAFYTGVADGRILKYQAPDGFTDFA 70 (310)
Q Consensus 46 ~l~~~d~~~g~I~r~~~~g~~~~~~ 70 (310)
.++|+...+|+|+.++.+.+...+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~ 35 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWS 35 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4577778899999999876666554
No 321
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.26 E-value=6.3 Score=35.56 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=81.1
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
...++++ +++++++...+|.|..++...+...... .........++++ ++.++.+...
T Consensus 175 ~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~------------------~~h~~~v~~l~~~--~~~l~s~s~d 232 (435)
T 1p22_A 175 SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTL------------------IHHCEAVLHLRFN--NGMMVTCSKD 232 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEE------------------CCCCSCEEEEECC--TTEEEEEETT
T ss_pred cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEE------------------cCCCCcEEEEEEc--CCEEEEeeCC
Confidence 3445555 5777888888888888887643221110 0112234566663 4556555555
Q ss_pred CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe
Q 048181 115 SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL 194 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~ 194 (310)
..|..+|..++..........+ .-...+.++++ +..++.+. .+|.+..+|..+++....
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~s~~------------------~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVG-HRAAVNVVDFD--DKYIVSAS------------------GDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECC-CSSCEEEEEEE--TTEEEEEE------------------TTSEEEEEETTTCCEEEE
T ss_pred CcEEEEeCCCCCCceeeeEecC-CCCcEEEEEeC--CCEEEEEe------------------CCCeEEEEECCcCcEEEE
Confidence 5577788765432211111111 11234556664 23444332 246788888776655433
Q ss_pred ec-CCCCCceeEEccCCCEEEEEecCCCeEEEEEecC
Q 048181 195 LR-NLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 195 ~~-~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
.. .-.....++++ ++ ++++-...+.|..+++..
T Consensus 292 ~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 292 LNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp EECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTT
T ss_pred EcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCC
Confidence 32 22334556664 55 455666788899898763
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.06 E-value=5.8 Score=34.75 Aligned_cols=199 Identities=10% Similarity=0.129 Sum_probs=101.0
Q ss_pred eeeeecceEEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCc
Q 048181 17 MVFSIPTFTKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRR 95 (310)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 95 (310)
++.+-.+-+.+.++.. ....+|++..++.+|++. ..+.|+|-...|+ ++..... .......
T Consensus 20 s~d~g~~W~~~~~~~~-~~~~~v~~~~~~~~~~~G-~~g~i~~s~DgG~tW~~~~~~----------------~~~~~~~ 81 (327)
T 2xbg_A 20 PALDYNPWEAIQLPTT-ATILDMSFIDRHHGWLVG-VNATLMETRDGGQTWEPRTLV----------------LDHSDYR 81 (327)
T ss_dssp CBCSSCCEEEEECSCS-SCEEEEEESSSSCEEEEE-TTTEEEEESSTTSSCEECCCC----------------CSCCCCE
T ss_pred cCCCCCCceEeecCCC-CcEEEEEECCCCcEEEEc-CCCeEEEeCCCCCCCeECCCC----------------CCCCCcc
Confidence 3444455566666643 356788887677766655 4677877654442 3332100 0001123
Q ss_pred eeeEEEecCCCeEEEEeCCCcEEEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeee
Q 048181 96 TFGLALHYATRQLYIADAYSGLLVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNIT 174 (310)
Q Consensus 96 P~Gla~d~~~g~LyVad~~~gi~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~ 174 (310)
-.+|+++ + +++|++.....|++ ..++|+. +.+... ...+ ..+.++++.+ ++++|+...
T Consensus 82 ~~~i~~~-~-~~~~~~g~~g~i~~-S~DgG~tW~~~~~~-~~~~-~~~~~i~~~~-~~~~~~~~~--------------- 140 (327)
T 2xbg_A 82 FNSVSFQ-G-NEGWIVGEPPIMLH-TTDGGQSWSQIPLD-PKLP-GSPRLIKALG-NGSAEMITN--------------- 140 (327)
T ss_dssp EEEEEEE-T-TEEEEEEETTEEEE-ESSTTSSCEECCCC-TTCS-SCEEEEEEEE-TTEEEEEET---------------
T ss_pred EEEEEec-C-CeEEEEECCCeEEE-ECCCCCCceECccc-cCCC-CCeEEEEEEC-CCCEEEEeC---------------
Confidence 4578886 3 78888743334555 4454443 332211 0001 1245677766 488887642
Q ss_pred cCCCceEEEEcCCCCeEEEeecCC-CCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCCceee--ecCCCCCceeeeC
Q 048181 175 NDSTGRLLSYNPRSSQVTVLLRNL-TGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDI--INFQAKPHNIKRN 251 (310)
Q Consensus 175 ~~~~G~l~~~d~~~g~~~~~~~~l-~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~--~~l~g~Pdgl~~d 251 (310)
.|.|++-+-....-+.+.... ....+++++++++ +|++. ..+.+++-+-.+. ...+. ...+.....++++
T Consensus 141 ---~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG--~tW~~~~~~~~~~~~~~~~~ 213 (327)
T 2xbg_A 141 ---VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQ--TAWEPHNRTTSRRLHNMGFT 213 (327)
T ss_dssp ---TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTC--SSCEEEECCSSSCEEEEEEC
T ss_pred ---CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCC--CceeECCCCCCCccceeEEC
Confidence 245666543222333333221 1346788998886 44433 3456666542211 11221 1112234567777
Q ss_pred CCCCCcEEEEEe
Q 048181 252 PGLLQTFWEAAI 263 (310)
Q Consensus 252 ~~~dG~l~va~~ 263 (310)
+ +|.+|++..
T Consensus 214 ~--~g~~~~~~~ 223 (327)
T 2xbg_A 214 P--DGRLWMIVN 223 (327)
T ss_dssp T--TSCEEEEET
T ss_pred C--CCCEEEEeC
Confidence 7 788887654
No 323
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=90.73 E-value=6.9 Score=38.78 Aligned_cols=98 Identities=9% Similarity=0.023 Sum_probs=54.2
Q ss_pred CccceEEe-CCCCe-EEEE-cCCCccCccceeEeeeecCCCceEEEEcCCCC-eEEEeecCCC-CCceeEEccCCCEEEE
Q 048181 141 FLDGLDVD-QGTGV-VYFT-DASGVYDFRTIVKLNITNDSTGRLLSYNPRSS-QVTVLLRNLT-GPAGVAISVDSSFLLV 215 (310)
Q Consensus 141 ~pndvavd-~~~G~-lyvt-d~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g-~~~~~~~~l~-~pnGIa~~~dg~~Lyv 215 (310)
...+.+++ |+ |+ |.++ +... .....|+.+|.+++ +. +.+.+. ...+++|+|||+.||+
T Consensus 175 ~~~~~~~S~PD-G~~lAy~~~~~G--------------~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y 237 (751)
T 2xe4_A 175 DVMEVKPAPPE-HDLVAFSVDMSG--------------NEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFY 237 (751)
T ss_dssp EEEEEEECTTT-TCEEEEEEESSS--------------SSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEE
T ss_pred EEeeeEecCCC-CCEEEEEEeCCC--------------CceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEE
Confidence 45578899 95 64 4444 3221 11235888998877 52 111111 1358999999988887
Q ss_pred EecC-C---CeEEEEEecCCCCCceeeecCC--CCCceeeeCCCCCCc
Q 048181 216 SEFT-G---NRTLKYWLRGPRANSFDIINFQ--AKPHNIKRNPGLLQT 257 (310)
Q Consensus 216 ~d~~-~---~~I~~~~~~~~~~g~~~~~~l~--g~Pdgl~~d~~~dG~ 257 (310)
+... . .+|+++++.++......+...+ .+--++.+++ ||.
T Consensus 238 ~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp--Dg~ 283 (751)
T 2xe4_A 238 VTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA--DTN 283 (751)
T ss_dssp EEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT--TSS
T ss_pred EEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC--CCC
Confidence 7542 1 4788888865321111221111 2223456777 775
No 324
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=90.60 E-value=9.4 Score=34.39 Aligned_cols=51 Identities=20% Similarity=0.135 Sum_probs=33.9
Q ss_pred CCceEEEEcCCCCeEEEeec-CCCCCc-eeEEccCCCEEEEEecCCCeEEEEEe
Q 048181 177 STGRLLSYNPRSSQVTVLLR-NLTGPA-GVAISVDSSFLLVSEFTGNRTLKYWL 228 (310)
Q Consensus 177 ~~G~l~~~d~~~g~~~~~~~-~l~~pn-GIa~~~dg~~Lyv~d~~~~~I~~~~~ 228 (310)
.+|.|..+|..+++...... ....+. .++|+|||++ +++-+..+.|+.+++
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~-LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSH-LLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSE-EEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCE-EEEEECCCcEEEecC
Confidence 45788888988887554443 222344 4899999985 456667777776654
No 325
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=89.74 E-value=0.47 Score=42.81 Aligned_cols=59 Identities=10% Similarity=0.186 Sum_probs=33.1
Q ss_pred CCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEeecCCCCCceeEEccCCCEEEEEecCCCeEEEEEec
Q 048181 151 TGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLR 229 (310)
Q Consensus 151 ~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~ 229 (310)
++.+|++.. +|.|+.+|..+|+..-.... .......+..+++ +|++.+..+.|+.++..
T Consensus 9 ~~~v~~gs~------------------dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTL------------------DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEET------------------TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred CCEEEEEcC------------------CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 588888753 36788899888876432222 2223333445564 67777778888888873
No 326
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=85.33 E-value=20 Score=32.58 Aligned_cols=185 Identities=11% Similarity=0.048 Sum_probs=92.3
Q ss_pred CcceEEEccCCCEEEEEeCCCeEEEEECCCceEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC
Q 048181 35 GGESIAFEPVGGAFYTGVADGRILKYQAPDGFTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY 114 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~ 114 (310)
...-+++.+...+++++..++-+ .++.+.-...+. .....+. .....+... +..|++| +..|+|+ ..
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~-v~~~~~l~~~~~-~~~~~~~-------~~~~~~lp~-V~~l~fd--~~~L~v~-~~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAV-VGELQLLRDHIT-SDSTPLT-------FKWEKEIPD-VIFVCFH--GDQVLVS-TR 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEE-EEEHHHHHHHHH-SSSCCCC-------CSEEEECTT-EEEEEEE--TTEEEEE-ES
T ss_pred cccEEEEcCCCCEEEEeCCCEEE-EEEhhHhhhhhc-ccccccc-------ceEEeeCCC-eeEEEEC--CCEEEEE-cC
Confidence 35568899988888888766433 354321000000 0000000 000011122 7788883 6788888 34
Q ss_pred CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeEEEe
Q 048181 115 SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQVTVL 194 (310)
Q Consensus 115 ~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~~~~ 194 (310)
.+|..+|..+-.......... .+ .+++...+ .++.+. ..+|.|+.+|.+++....+
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~-~~---v~~i~~~~--p~~av~------------------~~dG~L~v~dl~~~~~~~~ 161 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFE-KP---VFQLKNVN--NTLVIL------------------NSVNDLSALDLRTKSTKQL 161 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECS-SC---EEEEEECS--SEEEEE------------------ETTSEEEEEETTTCCEEEE
T ss_pred CcEEEEEchhhhccCccceee-cc---eeeEEecC--CCEEEE------------------ECCCCEEEEEccCCccccc
Confidence 468888865422111111111 11 23433332 122222 2357788887766655443
Q ss_pred ecCCCCCceeEEccCCCEEEEEecCCCeEEEEEecCCCCC-ceee------ec---CCCCCceeeeCCCCCCcEEEEEec
Q 048181 195 LRNLTGPAGVAISVDSSFLLVSEFTGNRTLKYWLRGPRAN-SFDI------IN---FQAKPHNIKRNPGLLQTFWEAAII 264 (310)
Q Consensus 195 ~~~l~~pnGIa~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g-~~~~------~~---l~g~Pdgl~~d~~~dG~l~va~~~ 264 (310)
.. ....++|+|+| +++ -..++.+..|++++.... ..++ .. -...+..|.+-+ ++.+.++-..
T Consensus 162 ~~---~Vs~v~WSpkG--~~v-g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~--~~~flv~y~~ 233 (388)
T 1xip_A 162 AQ---NVTSFDVTNSQ--LAV-LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS--PQDFLAVFGN 233 (388)
T ss_dssp EE---SEEEEEECSSE--EEE-EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS--SSEEEEEEEC
T ss_pred cC---CceEEEEcCCc--eEE-EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec--CCeEEEEEcC
Confidence 33 45789999999 333 345677888887653210 1111 00 123356677777 7666655443
No 327
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=84.54 E-value=30 Score=33.36 Aligned_cols=128 Identities=13% Similarity=0.050 Sum_probs=71.3
Q ss_pred CcceEEEcc-CCCEEEEEeCC-----------CeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEE
Q 048181 35 GGESIAFEP-VGGAFYTGVAD-----------GRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLAL 101 (310)
Q Consensus 35 ~Pegia~d~-~G~l~~~d~~~-----------g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~ 101 (310)
.+...++.+ +|.+|+.+-.+ ..++.+++... ++.+... ..+......+.++
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~----------------~~~~~~~~~~~~~ 250 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT----------------VTKHDMFCPGISM 250 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE----------------ECSCCCSSCEEEE
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc----------------CCCCCCccccccC
Confidence 355677776 78877775321 14677777632 3222110 0112223335666
Q ss_pred ecCCCeEEEEeCCC--cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCc
Q 048181 102 HYATRQLYIADAYS--GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTG 179 (310)
Q Consensus 102 d~~~g~LyVad~~~--gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G 179 (310)
. .+|+|||.-... .+.++|+.+++-+.+.. ..... .-..+++.+ +|+||+.-.... ......
T Consensus 251 ~-~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~-~~~~R--~~~s~~~~~-dg~iyv~GG~~~-----------~~~~~~ 314 (656)
T 1k3i_A 251 D-GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPD-MQVAR--GYQSSATMS-DGRVFTIGGSWS-----------GGVFEK 314 (656)
T ss_dssp C-TTSCEEEECSSSTTCEEEEEGGGTEEEECCC-CSSCC--SSCEEEECT-TSCEEEECCCCC-----------SSSCCC
T ss_pred C-CCCCEEEeCCCCCCceEEecCcCCceeECCC-CCccc--cccceEEec-CCeEEEEeCccc-----------CCcccc
Confidence 3 689999985432 49999998876655432 11111 123456666 499998754210 001124
Q ss_pred eEEEEcCCCCeEEEe
Q 048181 180 RLLSYNPRSSQVTVL 194 (310)
Q Consensus 180 ~l~~~d~~~g~~~~~ 194 (310)
.+++||+.+++.+.+
T Consensus 315 ~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSL 329 (656)
T ss_dssp CEEEEETTTTEEEEE
T ss_pred cceEeCCCCCcceeC
Confidence 688999988876654
No 328
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=77.24 E-value=53 Score=31.56 Aligned_cols=124 Identities=13% Similarity=0.087 Sum_probs=64.4
Q ss_pred eEEEccCCCEEEEEe-CCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC-
Q 048181 38 SIAFEPVGGAFYTGV-ADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY- 114 (310)
Q Consensus 38 gia~d~~G~l~~~d~-~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~- 114 (310)
+.++..+|.+|+++- ....++++++... ++... .+ +....-.+.++- .+|+|||.-..
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~-----------------~~-~~~R~~~s~~~~-~dg~iyv~GG~~ 307 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP-----------------DM-QVARGYQSSATM-SDGRVFTIGGSW 307 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC-----------------CC-SSCCSSCEEEEC-TTSCEEEECCCC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECC-----------------CC-CccccccceEEe-cCCeEEEEeCcc
Confidence 466677888888764 3457888988743 44321 00 111111245552 58999997541
Q ss_pred ------CcEEEEeCCCCeEEEeeccCCCccccCcc-ceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCC
Q 048181 115 ------SGLLVVGPNGRLATQLATGAEGQAFHFLD-GLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPR 187 (310)
Q Consensus 115 ------~gi~~id~~~~~~~~~~~~~~g~~~~~pn-dvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~ 187 (310)
..+.++|+++++.+.+.. ....++.... ..++.. ++.+|+-..... .++...+...++.||+.
T Consensus 308 ~~~~~~~~~e~yd~~t~~W~~~~~-~~~~p~~~~~~~~~~~~-~~~iyv~Gg~~g--------~~~~~~~~~~v~~yd~~ 377 (656)
T 1k3i_A 308 SGGVFEKNGEVYSPSSKTWTSLPN-AKVNPMLTADKQGLYRS-DNHAWLFGWKKG--------SVFQAGPSTAMNWYYTS 377 (656)
T ss_dssp CSSSCCCCEEEEETTTTEEEEETT-SCSGGGCCCCTTGGGTT-TCSCCEEECGGG--------CEEECCSSSEEEEEECS
T ss_pred cCCcccccceEeCCCCCcceeCCC-ccccccccccccceeec-CCceEEEECCCC--------cEEEecCccceeeeecC
Confidence 238899998877655421 1111221111 112223 467776543221 01112234578889987
Q ss_pred CCe
Q 048181 188 SSQ 190 (310)
Q Consensus 188 ~g~ 190 (310)
+..
T Consensus 378 ~~~ 380 (656)
T 1k3i_A 378 GSG 380 (656)
T ss_dssp TTC
T ss_pred Ccc
Confidence 665
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=75.04 E-value=37 Score=28.68 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=60.5
Q ss_pred eEEEecCCCeEEEEeC----------CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccc
Q 048181 98 GLALHYATRQLYIADA----------YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRT 167 (310)
Q Consensus 98 Gla~d~~~g~LyVad~----------~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~ 167 (310)
.++. -+++|||.-. ...++++|+++.+-+.+.. .... ..-..+++. +++||+-.....
T Consensus 144 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~--r~~~~~~~~--~~~i~v~GG~~~----- 211 (306)
T 3ii7_A 144 GMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-MIEA--RKNHGLVFV--KDKIFAVGGQNG----- 211 (306)
T ss_dssp EEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-CSSC--CBSCEEEEE--TTEEEEECCEET-----
T ss_pred EEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-ccch--hhcceEEEE--CCEEEEEeCCCC-----
Confidence 4444 3789999743 2348899999887665532 2111 111234444 488998743210
Q ss_pred eeEeeeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEEec-----CCCeEEEEEec
Q 048181 168 IVKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVSEF-----TGNRTLKYWLR 229 (310)
Q Consensus 168 ~~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~d~-----~~~~I~~~~~~ 229 (310)
......+++||+.+.+.+.+. .++.| -+++.. ++ .||+.-- ....+++|++.
T Consensus 212 -------~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 212 -------LGGLDNVEYYDIKLNEWKMVS-PMPWKGVTVKCAAV-GS-IVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp -------TEEBCCEEEEETTTTEEEECC-CCSCCBSCCEEEEE-TT-EEEEEECBCSSSBCCEEEEEETT
T ss_pred -------CCCCceEEEeeCCCCcEEECC-CCCCCccceeEEEE-CC-EEEEEeCcCCCeeeeeEEEEcCC
Confidence 001246899999888766653 23222 233333 33 4777643 23567777764
No 330
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=74.43 E-value=42 Score=29.06 Aligned_cols=189 Identities=14% Similarity=0.041 Sum_probs=92.7
Q ss_pred CCCEEEEE-eCCCeEEEEECC---CceEEeeeecCCCCccccCCCccccCCC-CCCceeeEEEecCCCeEEEEeCC----
Q 048181 44 VGGAFYTG-VADGRILKYQAP---DGFTDFAFTTPTRSKAVCDGTTNLDLGP-ICRRTFGLALHYATRQLYIADAY---- 114 (310)
Q Consensus 44 ~G~l~~~d-~~~g~I~r~~~~---g~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~P~Gla~d~~~g~LyVad~~---- 114 (310)
++.+|+.+ .....++++++. .+++.+.. + + ....-.++++. +++|||.-..
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~-----------------~-p~~~R~~~~~~~~--~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAA-----------------F-PGGPRDQATSAFI--DGNLYVFGGIGKNS 78 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCC-----------------C-TTCCCBSCEEEEE--TTEEEEECCEEECT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCC-----------------C-CCCcCccceEEEE--CCEEEEEcCCCCCC
Confidence 56777665 335679999986 34543310 0 1 11111245553 6899996332
Q ss_pred -------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEe----------------
Q 048181 115 -------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKL---------------- 171 (310)
Q Consensus 115 -------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~---------------- 171 (310)
+.++++|+.+.+-+.+....+. + ..-..+++ - ++.||+-.............+
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~p~-~-r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHAPM-G-MAGHVTFV-H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCCSS-C-CSSEEEEE-E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccceeeccEEEEeCCCCcEEECCCCCCc-c-cccceEEE-E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 2389999998776655432201 1 11122344 4 589998653221000000000
Q ss_pred ------eeecCCCceEEEEcCCCCeEEEeecCCCCC----ceeEEccCCCEEEEEec------CCCeEEEEEecCCCCCc
Q 048181 172 ------NITNDSTGRLLSYNPRSSQVTVLLRNLTGP----AGVAISVDSSFLLVSEF------TGNRTLKYWLRGPRANS 235 (310)
Q Consensus 172 ------~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p----nGIa~~~dg~~Lyv~d~------~~~~I~~~~~~~~~~g~ 235 (310)
.........+++||+.+.+.+.+.. ++.| -+++.. ++.||+.-- ....+++|+++.. ...
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~-~~~ 230 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGN-NLK 230 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC----CE
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCC-CCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCC-CCc
Confidence 0000123579999998887766543 2222 233333 345888621 2457888887421 233
Q ss_pred eee-ecCCCCCc---e-eeeCCCCCCcEEEEEe
Q 048181 236 FDI-INFQAKPH---N-IKRNPGLLQTFWEAAI 263 (310)
Q Consensus 236 ~~~-~~l~g~Pd---g-l~~d~~~dG~l~va~~ 263 (310)
.+. ..++ .|. + -++-- ++.||+...
T Consensus 231 W~~~~~~~-~~~~~~~~~~~~~--~~~iyv~GG 260 (357)
T 2uvk_A 231 WNKLAPVS-SPDGVAGGFAGIS--NDSLIFAGG 260 (357)
T ss_dssp EEECCCSS-TTTCCBSCEEEEE--TTEEEEECC
T ss_pred EEecCCCC-CCcccccceEEEE--CCEEEEEcC
Confidence 333 3333 122 2 13333 578888754
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=70.98 E-value=22 Score=31.64 Aligned_cols=24 Identities=25% Similarity=0.203 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEE
Q 048181 105 TRQLYIADAYSGLLVVGPNGRLAT 128 (310)
Q Consensus 105 ~g~LyVad~~~gi~~id~~~~~~~ 128 (310)
++.+||......|+.+|.++|+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~ 33 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHII 33 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEE
Confidence 355666665555677776666543
No 332
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=69.72 E-value=90 Score=30.80 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=58.8
Q ss_pred CcceEEEccCC-CEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEEE
Q 048181 35 GGESIAFEPVG-GAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYIA 111 (310)
Q Consensus 35 ~Pegia~d~~G-~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyVa 111 (310)
.-.+|+++|.+ +++|+....+.|+|-...|+ ++.+.......+ -+. .. ........|++|+. .+++|++
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~----~~~--~~--~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNA----LAG--NG--ANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTC----SSS--CC--CCCCSEEEEECCTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccc----cCC--Cc--ccccceeEEEECCCCCCEEEEE
Confidence 56789999875 67888888888999887764 443211000000 000 00 01123457888743 4789986
Q ss_pred eC-------CCcEEEEeCCCCe-EEEeeccCC--Cc-c-ccCccceEEeCC-CCeEEEEc
Q 048181 112 DA-------YSGLLVVGPNGRL-ATQLATGAE--GQ-A-FHFLDGLDVDQG-TGVVYFTD 158 (310)
Q Consensus 112 d~-------~~gi~~id~~~~~-~~~~~~~~~--g~-~-~~~pndvavd~~-~G~lyvtd 158 (310)
.. ..+|++=+ ++|+ -+.+..... +. + -.....+++++. .+.+|+..
T Consensus 94 ~g~~~~~~~~~~i~~S~-DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 94 QGDYVQWDPWAAFLVSD-DRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp ECSCTTTCSCCEEEEES-STTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC
T ss_pred ecccccCCCCceEEEEC-CCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe
Confidence 53 13355544 4443 233321110 00 0 001136888874 26788763
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=68.99 E-value=53 Score=27.89 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=53.1
Q ss_pred eEEEecCCCeEEEEeCC-------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeE
Q 048181 98 GLALHYATRQLYIADAY-------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~-------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~ 170 (310)
.++. -+++|||.-.. ..++++|+.+.+-+.+... .... .-..+++. +++||+.......
T Consensus 143 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r--~~~~~~~~--~~~iyv~GG~~~~------- 208 (315)
T 4asc_A 143 TVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTAR--SLFGATVH--DGRIIVAAGVTDT------- 208 (315)
T ss_dssp EEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCC--BSCEEEEE--TTEEEEEEEECSS-------
T ss_pred eEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCch--hceEEEEE--CCEEEEEeccCCC-------
Confidence 4444 37889997542 2489999998776655322 1111 11233444 4899986432100
Q ss_pred eeeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEE
Q 048181 171 LNITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVS 216 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~ 216 (310)
.....+++||+.+.+.+.+.. ++.| -+++.. ++ .||+.
T Consensus 209 -----~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~l~v~ 249 (315)
T 4asc_A 209 -----GLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVSL-VG-TLYAI 249 (315)
T ss_dssp -----SEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEE
T ss_pred -----CccceEEEEECCCCeEEECCC-CCCcccceeEEEE-CC-EEEEE
Confidence 012368999998887766543 3222 133333 34 57775
No 334
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=68.44 E-value=93 Score=30.49 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=64.9
Q ss_pred ceeeEEEecCC-CeEEEEeCCCcEEEEeCCCCeEEEeeccCCCc--cccCccceEEeCC-CCeEEEEcCCCccCccceeE
Q 048181 95 RTFGLALHYAT-RQLYIADAYSGLLVVGPNGRLATQLATGAEGQ--AFHFLDGLDVDQG-TGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 95 ~P~Gla~d~~~-g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~--~~~~pndvavd~~-~G~lyvtd~~~~~~~~~~~~ 170 (310)
+..+|++++.+ +.+|+.....+|++-+..+..-+.+....... .......|++||. .+.+|++-.......
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~----- 98 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDW----- 98 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSS-----
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccc-----
Confidence 66789997543 78888654557999886665545543211111 1233568999983 368998753210000
Q ss_pred eeeecCCCceEEEEcCCCCeEEEeecCCC---------CCceeEEccC-CCEEEEEecCCCeEEE
Q 048181 171 LNITNDSTGRLLSYNPRSSQVTVLLRNLT---------GPAGVAISVD-SSFLLVSEFTGNRTLK 225 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~~~~~~~~l~---------~pnGIa~~~d-g~~Lyv~d~~~~~I~~ 225 (310)
....+.|||-+-...+-+.+...+. .-..|+++|. .+.||+.......|++
T Consensus 99 ----~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~ 159 (737)
T 2cn3_A 99 ----LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR 159 (737)
T ss_dssp ----SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE
T ss_pred ----ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE
Confidence 0012457776543233333322211 1257899875 3567776422244553
No 335
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=64.56 E-value=27 Score=31.51 Aligned_cols=77 Identities=8% Similarity=0.040 Sum_probs=51.8
Q ss_pred cCCCEEEEEecCCC--eEEEEEecCCCCC-ceee-ecCC---CCCc-eeeeCCCCCCcEEEEEecCCCCCCCCceeeEEE
Q 048181 208 VDSSFLLVSEFTGN--RTLKYWLRGPRAN-SFDI-INFQ---AKPH-NIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRI 279 (310)
Q Consensus 208 ~dg~~Lyv~d~~~~--~I~~~~~~~~~~g-~~~~-~~l~---g~Pd-gl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~ 279 (310)
.+.++||.-+...+ .|..|+++..+.- ...+ ...| +.+. ++-+-. +..+|+..... +.+..+
T Consensus 37 ~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~--~DsI~i~~~~~--------~~i~l~ 106 (369)
T 3s9j_A 37 NGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPD--SQYILVAQNNI--------SRLSSI 106 (369)
T ss_dssp TTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSS--TTSEEEEEGGG--------TEEEEE
T ss_pred CCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecC--CCEEEEEeCCc--------ceEEEE
Confidence 33457888888888 9999998742110 1111 1112 2353 355666 77999998775 379999
Q ss_pred CCCCcEEEEEecCCC
Q 048181 280 SAFGAVLDTISFEAQ 294 (310)
Q Consensus 280 ~~~G~~~~~~~~p~~ 294 (310)
|.+|+++..+.+...
T Consensus 107 n~~G~~~~k~~~~~~ 121 (369)
T 3s9j_A 107 NSQGEIIRNYNFQTP 121 (369)
T ss_dssp CTTCCEEEEEECCCT
T ss_pred CCCceEEEEEecCCC
Confidence 999999999988754
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=63.94 E-value=67 Score=27.25 Aligned_cols=79 Identities=9% Similarity=0.161 Sum_probs=45.3
Q ss_pred eEEEecCCCeEEEEeCC-------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeE
Q 048181 98 GLALHYATRQLYIADAY-------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~-------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~ 170 (310)
.+++ -+++|||.-.. +.++++|+++++-+.+... .... .-..+++. ++.||+-..... .
T Consensus 153 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r--~~~~~~~~--~~~iyv~GG~~~---~---- 218 (318)
T 2woz_A 153 NVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPR--SMFGVAIH--KGKIVIAGGVTE---D---- 218 (318)
T ss_dssp EEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCC--BSCEEEEE--TTEEEEEEEEET---T----
T ss_pred EEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCc--ccceEEEE--CCEEEEEcCcCC---C----
Confidence 4444 37899997431 2489999998776655322 1111 11234444 489998642110 0
Q ss_pred eeeecCCCceEEEEcCCCCeEEEee
Q 048181 171 LNITNDSTGRLLSYNPRSSQVTVLL 195 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~~~~~~ 195 (310)
.....+++||+.+.+.+.+.
T Consensus 219 -----~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 219 -----GLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp -----EEEEEEEEEETTTCCEEECC
T ss_pred -----CccceEEEEECCCCeEEECC
Confidence 01136889999888766653
No 337
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=57.66 E-value=1.5e+02 Score=29.07 Aligned_cols=124 Identities=12% Similarity=0.146 Sum_probs=64.1
Q ss_pred cceEEEeCCCCCCCcceEEEccC-CCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeE
Q 048181 22 PTFTKILFPPKAFGGESIAFEPV-GGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGL 99 (310)
Q Consensus 22 ~~~~~~~~~~~~~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gl 99 (310)
.+-+.+...+.-....+|++++. .+++|+....+.|+|-+..|+ ++.+. +......+ ....-..|
T Consensus 11 ~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~-----------~~~~~~~~--~~~~i~~i 77 (737)
T 2cn3_A 11 YKWDNVVIGGGGGFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLL-----------DHFQMDEY--SYYGVESI 77 (737)
T ss_dssp EEEEEECCCSBCSCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECC-----------TTCCGGGG--GGGCEEEE
T ss_pred CeeEEcccCCCcceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECc-----------CccCcccc--cCCCcceE
Confidence 34555554432115668999986 356778877788999987764 44321 00000000 01123578
Q ss_pred EEecC-CCeEEEEeCC---------CcEEEEeCCCCeEEEeeccCC-Cc--c-ccCccceEEeCCC-CeEEEEc
Q 048181 100 ALHYA-TRQLYIADAY---------SGLLVVGPNGRLATQLATGAE-GQ--A-FHFLDGLDVDQGT-GVVYFTD 158 (310)
Q Consensus 100 a~d~~-~g~LyVad~~---------~gi~~id~~~~~~~~~~~~~~-g~--~-~~~pndvavd~~~-G~lyvtd 158 (310)
++|+. .++||++... .+|++=+..+..-+.+..... +. + -.....|+++|.+ +.+|+..
T Consensus 78 ~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 78 ATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 88853 4689987531 235555433332233322111 00 0 0112579998853 5777764
No 338
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=57.48 E-value=1.1e+02 Score=27.57 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=73.6
Q ss_pred EEEeCCCCCCCcceEEEccCCCEEEEEeCCCeEEEEECCCce--EEeeeecCCCCccccCCCccccCCCCCCceeeEEEe
Q 048181 25 TKILFPPKAFGGESIAFEPVGGAFYTGVADGRILKYQAPDGF--TDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALH 102 (310)
Q Consensus 25 ~~~~~~~~~~~Pegia~d~~G~l~~~d~~~g~I~r~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d 102 (310)
..+++|. +..+++ +++.+++. .++.|+.++...-. ..... + ......+..-
T Consensus 83 ~~~~lp~----V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~---------~-----------~~~v~~i~~~ 135 (388)
T 1xip_A 83 WEKEIPD----VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTS---------F-----------EKPVFQLKNV 135 (388)
T ss_dssp EEEECTT----EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEE---------C-----------SSCEEEEEEC
T ss_pred EEeeCCC----eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccce---------e-----------ecceeeEEec
Confidence 3456663 789999 77878887 67889999865211 11100 0 0011233331
Q ss_pred cCCCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEE
Q 048181 103 YATRQLYIADAYSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLL 182 (310)
Q Consensus 103 ~~~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~ 182 (310)
..++.++.....|+.++.+.+....+. .....++.+++ | +.++- .+|.+.
T Consensus 136 --~p~~av~~~dG~L~v~dl~~~~~~~~~--------~~Vs~v~WSpk-G-~~vg~------------------~dg~i~ 185 (388)
T 1xip_A 136 --NNTLVILNSVNDLSALDLRTKSTKQLA--------QNVTSFDVTNS-Q-LAVLL------------------KDRSFQ 185 (388)
T ss_dssp --SSEEEEEETTSEEEEEETTTCCEEEEE--------ESEEEEEECSS-E-EEEEE------------------TTSCEE
T ss_pred --CCCEEEEECCCCEEEEEccCCcccccc--------CCceEEEEcCC-c-eEEEE------------------cCCcEE
Confidence 223555555445667776655443322 13457899995 7 44432 245666
Q ss_pred EEcCCCCeE--EEee-------c---CCCCCceeEEccCCCEEEE
Q 048181 183 SYNPRSSQV--TVLL-------R---NLTGPAGVAISVDSSFLLV 215 (310)
Q Consensus 183 ~~d~~~g~~--~~~~-------~---~l~~pnGIa~~~dg~~Lyv 215 (310)
.|++++++. +..+ + .-.....|.|.+++.++.+
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 667766664 2222 1 2245678999988865433
No 339
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=51.38 E-value=1.9e+02 Score=28.46 Aligned_cols=66 Identities=12% Similarity=0.111 Sum_probs=40.6
Q ss_pred CCceeeEEEecCC-CeEEEEeCCCcEEEEeCCCCeEEEeeccC-----CCc--cccCccceEEeCC-CCeEEEEc
Q 048181 93 CRRTFGLALHYAT-RQLYIADAYSGLLVVGPNGRLATQLATGA-----EGQ--AFHFLDGLDVDQG-TGVVYFTD 158 (310)
Q Consensus 93 ~~~P~Gla~d~~~-g~LyVad~~~gi~~id~~~~~~~~~~~~~-----~g~--~~~~pndvavd~~-~G~lyvtd 158 (310)
.++..+|++++.+ +.+|++....+|++-+..+..-+.+.... ... .......+++++. .+.+|+..
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 4577789998554 56888765567888775554444443312 111 2334678899883 37888854
No 340
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=47.01 E-value=2.2e+02 Score=28.06 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=40.0
Q ss_pred CCceeeEEEecC-CCeEEEEeCCCcEEEEeCCCCeEEEeeccCCCc--cccCccceEEeCC-CCeEEEEc
Q 048181 93 CRRTFGLALHYA-TRQLYIADAYSGLLVVGPNGRLATQLATGAEGQ--AFHFLDGLDVDQG-TGVVYFTD 158 (310)
Q Consensus 93 ~~~P~Gla~d~~-~g~LyVad~~~gi~~id~~~~~~~~~~~~~~g~--~~~~pndvavd~~-~G~lyvtd 158 (310)
.++..+|++++. .+.+|+.....+|++-+..+..-+.+....... ......+|++++. .+.+|+.-
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 346778999754 467888765567888875554444443211100 1234678999873 25788864
No 341
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=46.09 E-value=1.3e+02 Score=25.03 Aligned_cols=156 Identities=14% Similarity=0.126 Sum_probs=83.8
Q ss_pred eEEEecCCCeEEEEeCC------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEe
Q 048181 98 GLALHYATRQLYIADAY------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKL 171 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~ 171 (310)
++++. +++|||.-.. ..++++|+.+++-+.+..... .. .-..+++. ++.||+-.....
T Consensus 107 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r--~~~~~~~~--~~~iyv~GG~~~--------- 170 (301)
T 2vpj_A 107 GATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-AR--EGAGLVVA--SGVIYCLGGYDG--------- 170 (301)
T ss_dssp EEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-CC--BSCEEEEE--TTEEEEECCBCS---------
T ss_pred eEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-Cc--ccceEEEE--CCEEEEECCCCC---------
Confidence 45553 7899998432 248999999877665543221 11 11233343 489998753211
Q ss_pred eeecCCCceEEEEcCCCCeEEEeecCCCCCc---eeEEccCCCEEEEEecC-----CCeEEEEEecCCCCCceee-ecCC
Q 048181 172 NITNDSTGRLLSYNPRSSQVTVLLRNLTGPA---GVAISVDSSFLLVSEFT-----GNRTLKYWLRGPRANSFDI-INFQ 242 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~~~g~~~~~~~~l~~pn---GIa~~~dg~~Lyv~d~~-----~~~I~~~~~~~~~~g~~~~-~~l~ 242 (310)
......+++||+.+.+.+.+. .++.|. .++.. ++ .||+.--. .+.+++|++.. .+.+. ..+|
T Consensus 171 ---~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p 241 (301)
T 2vpj_A 171 ---LNILNSVEKYDPHTGHWTNVT-PMATKRSGAGVALL-ND-HIYVVGGFDGTAHLSSVEAYNIRT---DSWTTVTSMT 241 (301)
T ss_dssp ---SCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTT---TEEEEECCCS
T ss_pred ---CcccceEEEEeCCCCcEEeCC-CCCcccccceEEEE-CC-EEEEEeCCCCCcccceEEEEeCCC---CcEEECCCCC
Confidence 011346999999888776653 333221 23332 33 58886432 35789998753 33332 3333
Q ss_pred C--CCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCc
Q 048181 243 A--KPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGA 284 (310)
Q Consensus 243 g--~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~ 284 (310)
. .-..+++ - +|.||+....... .....+.+||++..
T Consensus 242 ~~r~~~~~~~-~--~~~i~v~GG~~~~---~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 242 TPRCYVGATV-L--RGRLYAIAGYDGN---SLLSSIECYDPIID 279 (301)
T ss_dssp SCCBSCEEEE-E--TTEEEEECCBCSS---SBEEEEEEEETTTT
T ss_pred CcccceeEEE-E--CCEEEEEcCcCCC---cccccEEEEcCCCC
Confidence 1 1122333 3 5688887543211 01246788998643
No 342
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=45.91 E-value=1.3e+02 Score=25.01 Aligned_cols=146 Identities=14% Similarity=0.141 Sum_probs=77.4
Q ss_pred CCCEEEEEeC-----CCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC---
Q 048181 44 VGGAFYTGVA-----DGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY--- 114 (310)
Q Consensus 44 ~G~l~~~d~~-----~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~--- 114 (310)
++.+|+.+-. ...+.++++... ++.+... +....-..+++ -+++||+.-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~------------------p~~r~~~~~~~--~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM------------------QTAREGAGLVV--ASGVIYCLGGYDGL 171 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC------------------SSCCBSCEEEE--ETTEEEEECCBCSS
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCC------------------CCCcccceEEE--ECCEEEEECCCCCC
Confidence 5677766521 346888887743 4443210 11111224444 27899997432
Q ss_pred ---CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 115 ---SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 115 ---~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
..+.++|+++++.+.+... .... .-..+++. ++.||+-..... ......+++||+.+.+.
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~~~~--~~~i~v~GG~~~------------~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPM-ATKR--SGAGVALL--NDHIYVVGGFDG------------TAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCC-SSCC--BSCEEEEE--TTEEEEECCBCS------------SSBCCCEEEEETTTTEE
T ss_pred cccceEEEEeCCCCcEEeCCCC-Cccc--ccceEEEE--CCEEEEEeCCCC------------CcccceEEEEeCCCCcE
Confidence 3489999998876655322 1111 11233443 489998753221 01134699999988877
Q ss_pred EEeecCCCCC---ceeEEccCCCEEEEEecCC-----CeEEEEEec
Q 048181 192 TVLLRNLTGP---AGVAISVDSSFLLVSEFTG-----NRTLKYWLR 229 (310)
Q Consensus 192 ~~~~~~l~~p---nGIa~~~dg~~Lyv~d~~~-----~~I~~~~~~ 229 (310)
+.+. .++.| -+++.. ++ .||+.--.. ..|++|++.
T Consensus 235 ~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 235 TTVT-SMTTPRCYVGATVL-RG-RLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EEEC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSBEEEEEEEETT
T ss_pred EECC-CCCCcccceeEEEE-CC-EEEEEcCcCCCcccccEEEEcCC
Confidence 6654 23222 133333 44 477753221 456777764
No 343
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=42.07 E-value=1.9e+02 Score=25.80 Aligned_cols=145 Identities=8% Similarity=0.032 Sum_probs=72.4
Q ss_pred CCCeEEEEeCCCc-EEEEeCCCCeE-EEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceE
Q 048181 104 ATRQLYIADAYSG-LLVVGPNGRLA-TQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRL 181 (310)
Q Consensus 104 ~~g~LyVad~~~g-i~~id~~~~~~-~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l 181 (310)
.++.++++-...+ |...|.++++. ..+ .. ........+.++++| +|.+.++-..... ...+.....++.+
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL-~g-~~~~v~~v~~vafSp-dG~~lvs~s~~~~-----~w~laSGs~D~tI 262 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKM-HI-DDSYQASVCHKAYSE-MGLLFIVLSHPCA-----KESESLRSPVFQL 262 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEE-EC-CC---CCCEEEEEEE-TTEEEEEEC-----------------CCEEE
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEE-cC-CCcceeeeEEEEECC-CCCEEEEeccCCC-----cceeeccCCCcEE
Confidence 3667777644444 77779988764 333 21 111223455678999 5988876442100 0122334556778
Q ss_pred EEEcCCCCeEEEeecCCCCCce-----eEEccCCCEEEEEecCCCeEEEEEecCCCCCceeeecCC---CCCc-eeeeCC
Q 048181 182 LSYNPRSSQVTVLLRNLTGPAG-----VAISVDSSFLLVSEFTGNRTLKYWLRGPRANSFDIINFQ---AKPH-NIKRNP 252 (310)
Q Consensus 182 ~~~d~~~g~~~~~~~~l~~pnG-----Ia~~~dg~~Lyv~d~~~~~I~~~~~~~~~~g~~~~~~l~---g~Pd-gl~~d~ 252 (310)
..+|+.+++...... +..|+| +..+.++. +.++-+..+.|..+++.. |+.. ..+. ..+- -+++.+
T Consensus 263 klWd~~tgk~l~v~~-~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~t---Gk~l-~tL~gH~~~vvs~vafSP 336 (356)
T 2w18_A 263 IVINPKTTLSVGVML-YCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLL---GQCT-ALLPPVSDQHWSFVKWSG 336 (356)
T ss_dssp EEEETTTTEEEEEEE-ECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTT---CSEE-EEECCC--CCCCEEEECS
T ss_pred EEEECCCCEEEEEEE-eeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCC---CcEE-EEecCCCCCeEEEEEECC
Confidence 778888776432210 001211 11122233 456666677888888753 3221 1222 1233 378888
Q ss_pred CCCCcEEEEEec
Q 048181 253 GLLQTFWEAAII 264 (310)
Q Consensus 253 ~~dG~l~va~~~ 264 (310)
||.+.++...
T Consensus 337 --DG~~LaSGS~ 346 (356)
T 2w18_A 337 --TDSHLLAGQK 346 (356)
T ss_dssp --SSSEEEEECT
T ss_pred --CCCEEEEEEC
Confidence 8987666543
No 344
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=41.07 E-value=1.6e+02 Score=24.68 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=61.0
Q ss_pred eEEEecCCCeEEEEeCC------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEe
Q 048181 98 GLALHYATRQLYIADAY------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKL 171 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~ 171 (310)
..++. +++|||.-.. ..+.++|+++.+-+.+.. ..... .-..+++. ++.||+-.....
T Consensus 163 ~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r--~~~~~~~~--~~~iyv~GG~~~--------- 226 (308)
T 1zgk_A 163 GVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNTIR--SGAGVCVL--HNCIYAAGGYDG--------- 226 (308)
T ss_dssp EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSSCC--BSCEEEEE--TTEEEEECCBCS---------
T ss_pred EEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCCcc--ccceEEEE--CCEEEEEeCCCC---------
Confidence 44543 7899997432 248999999877665532 21111 11234444 488998753221
Q ss_pred eeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEEec-----CCCeEEEEEec
Q 048181 172 NITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVSEF-----TGNRTLKYWLR 229 (310)
Q Consensus 172 ~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~d~-----~~~~I~~~~~~ 229 (310)
......+++||+.+.+.+.+. .++.| -+++.. ++ .||+.-- ....+++|++.
T Consensus 227 ---~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 227 ---QDQLNSVERYDVETETWTFVA-PMKHRRSALGITVH-QG-RIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp ---SSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEEEETT
T ss_pred ---CCccceEEEEeCCCCcEEECC-CCCCCccceEEEEE-CC-EEEEEcCcCCCcccceEEEEcCC
Confidence 011246999999888776654 33322 233333 33 4777532 23467777764
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=39.36 E-value=1.7e+02 Score=24.57 Aligned_cols=165 Identities=14% Similarity=0.201 Sum_probs=84.8
Q ss_pred eEEEecCCCeEEEEeCC--------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcccee
Q 048181 98 GLALHYATRQLYIADAY--------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~--------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~ 169 (310)
+++.. +++|||.-.. +.++++|+.+.+-+.+.. .+... .-..+++ - ++.||+-.....
T Consensus 104 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r--~~~~~~~-~-~~~iyv~GG~~~------- 169 (318)
T 2woz_A 104 GLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPIKV--YGHNVIS-H-NGMIYCLGGKTD------- 169 (318)
T ss_dssp EEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSSCE--ESCEEEE-E-TTEEEEECCEES-------
T ss_pred ceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCCcc--cccEEEE-E-CCEEEEEcCCCC-------
Confidence 55553 7899997431 138899999877665532 22111 1123444 3 589998643210
Q ss_pred EeeeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEEec-----CCCeEEEEEecCCCCCceee-ec
Q 048181 170 KLNITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVSEF-----TGNRTLKYWLRGPRANSFDI-IN 240 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~d~-----~~~~I~~~~~~~~~~g~~~~-~~ 240 (310)
.......+++||+.+.+.+.+. .+..| -+++.. ++ .||+.-- ....+++|++.. .+.+. ..
T Consensus 170 ----~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~ 239 (318)
T 2woz_A 170 ----DKKCTNRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIH-KG-KIVIAGGVTEDGLSASVEAFDLKT---NKWEVMTE 239 (318)
T ss_dssp ----SSCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEEEEEETTEEEEEEEEEETTT---CCEEECCC
T ss_pred ----CCCccceEEEEcCCCCEEEECC-CCCCCcccceEEEE-CC-EEEEEcCcCCCCccceEEEEECCC---CeEEECCC
Confidence 0012346999999888766654 23222 233333 44 5787632 124678888753 33333 33
Q ss_pred CCC-C-CceeeeCCCCCCcEEEEEecCCCCC------CCCceeeEEECCCCcEEEEE
Q 048181 241 FQA-K-PHNIKRNPGLLQTFWEAAIITRQPA------GTPVPIGQRISAFGAVLDTI 289 (310)
Q Consensus 241 l~g-~-Pdgl~~d~~~dG~l~va~~~~~~~~------~~~~~~v~~~~~~G~~~~~~ 289 (310)
+|. . -..+++ - +|.||+......... +.....+.+||++-..=..+
T Consensus 240 ~p~~r~~~~~~~-~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 240 FPQERSSISLVS-L--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CSSCCBSCEEEE-E--TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCcccceEEEE-E--CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 431 1 112333 3 578887643221000 01124578899875443434
No 346
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=37.67 E-value=1.8e+02 Score=24.19 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=60.4
Q ss_pred eEEEecCCCeEEEEeC--------CCcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcccee
Q 048181 98 GLALHYATRQLYIADA--------YSGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 98 Gla~d~~~g~LyVad~--------~~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~ 169 (310)
++++ -+++|||.-. ...+.++|+++++-+.+... .... .-..+++. ++.||+-.....
T Consensus 150 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r--~~~~~~~~--~~~iyv~GG~~~------- 215 (302)
T 2xn4_A 150 GVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM-STRR--SGAGVGVL--NNLLYAVGGHDG------- 215 (302)
T ss_dssp EEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCC-SSCC--BSCEEEEE--TTEEEEECCBSS-------
T ss_pred eEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCC-cccc--ccccEEEE--CCEEEEECCCCC-------
Confidence 4454 3789999732 12489999998776655322 2111 11234444 489998753221
Q ss_pred EeeeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEEecC-----CCeEEEEEec
Q 048181 170 KLNITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVSEFT-----GNRTLKYWLR 229 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~d~~-----~~~I~~~~~~ 229 (310)
......+++||+.+++.+.+.. +..| -+++.. ++ .||+.--. ...+++|++.
T Consensus 216 -----~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 216 -----PLVRKSVEVYDPTTNAWRQVAD-MNMCRRNAGVCAV-NG-LLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp -----SSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETT
T ss_pred -----CcccceEEEEeCCCCCEeeCCC-CCCccccCeEEEE-CC-EEEEECCcCCCcccccEEEEcCC
Confidence 0112469999998887766542 2222 233333 34 47775321 2457777764
No 347
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=36.88 E-value=2.9e+02 Score=26.98 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=22.2
Q ss_pred cEEEEeCCCCeEEEeeccCCCccccCccceEEeCCC-CeEEEEcC
Q 048181 116 GLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGT-GVVYFTDA 159 (310)
Q Consensus 116 gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~-G~lyvtd~ 159 (310)
+|++=+..+..-+.+........+.....|+++|.+ +++|+...
T Consensus 66 gvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~ 110 (685)
T 3f6k_A 66 KLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAE 110 (685)
T ss_dssp EEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEEC
T ss_pred eEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEe
Confidence 466655444333444322222222233578998853 36777643
No 348
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=35.95 E-value=1.9e+02 Score=24.04 Aligned_cols=195 Identities=10% Similarity=0.008 Sum_probs=100.5
Q ss_pred CCCEEEEEe----CCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecCCCeEEEEeCC----
Q 048181 44 VGGAFYTGV----ADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYATRQLYIADAY---- 114 (310)
Q Consensus 44 ~G~l~~~d~----~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~~g~LyVad~~---- 114 (310)
++.+|+.+- ....++++++... ++.+.. + +....-..++. -+++|||.-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~-----------------~-p~~r~~~~~~~--~~~~iyv~GG~~~~~ 114 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG-----------------P-PTPRDSLAACA--AEGKIYTSGGSEVGN 114 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC-----------------C-SSCCBSCEEEE--ETTEEEEECCBBTTB
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC-----------------C-CccccceeEEE--ECCEEEEECCCCCCC
Confidence 566776653 2367888888754 443321 0 11111224444 27899997432
Q ss_pred ---CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeEeeeecCCCceEEEEcCCCCeE
Q 048181 115 ---SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVKLNITNDSTGRLLSYNPRSSQV 191 (310)
Q Consensus 115 ---~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~~~~~~~~~G~l~~~d~~~g~~ 191 (310)
..++++|+.+++-+.+... .... .-..+++. ++.||+-......... ......+++||+.+.+.
T Consensus 115 ~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~~~~--~~~iyv~GG~~~~~~~--------~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 115 SALYLFECYDTRTESWHTKPSM-LTQR--CSHGMVEA--NGLIYVCGGSLGNNVS--------GRVLNSCEVYDPATETW 181 (306)
T ss_dssp SCCCCEEEEETTTTEEEEECCC-SSCC--BSCEEEEE--TTEEEEECCEESCTTT--------CEECCCEEEEETTTTEE
T ss_pred cEeeeEEEEeCCCCceEeCCCC-cCCc--ceeEEEEE--CCEEEEECCCCCCCCc--------ccccceEEEeCCCCCeE
Confidence 2389999998776655322 2111 11233333 4899986532110000 00035699999988877
Q ss_pred EEeecCCCCC---ceeEEccCCCEEEEEec-----CCCeEEEEEecCCCCCceee-ecCCC--CCceeeeCCCCCCcEEE
Q 048181 192 TVLLRNLTGP---AGVAISVDSSFLLVSEF-----TGNRTLKYWLRGPRANSFDI-INFQA--KPHNIKRNPGLLQTFWE 260 (310)
Q Consensus 192 ~~~~~~l~~p---nGIa~~~dg~~Lyv~d~-----~~~~I~~~~~~~~~~g~~~~-~~l~g--~Pdgl~~d~~~dG~l~v 260 (310)
+.+.. +..| -.++.. ++ .||+.-- ....+++|++.. .+.+. ..+|. .-..+++- ++.||+
T Consensus 182 ~~~~~-~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~---~~~i~v 252 (306)
T 3ii7_A 182 TELCP-MIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKL---NEWKMVSPMPWKGVTVKCAAV---GSIVYV 252 (306)
T ss_dssp EEECC-CSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTT---TEEEECCCCSCCBSCCEEEEE---TTEEEE
T ss_pred EECCC-ccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCC---CcEEECCCCCCCccceeEEEE---CCEEEE
Confidence 66542 3222 233333 44 5888622 135688998753 33333 33331 11223333 468888
Q ss_pred EEecCCCCCCCCceeeEEECCCC
Q 048181 261 AAIITRQPAGTPVPIGQRISAFG 283 (310)
Q Consensus 261 a~~~~~~~~~~~~~~v~~~~~~G 283 (310)
....... .....+.+||++.
T Consensus 253 ~GG~~~~---~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 253 LAGFQGV---GRLGHILEYNTET 272 (306)
T ss_dssp EECBCSS---SBCCEEEEEETTT
T ss_pred EeCcCCC---eeeeeEEEEcCCC
Confidence 7543211 0124688899864
No 349
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=34.05 E-value=1.2e+02 Score=28.90 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=36.4
Q ss_pred CceEEEEcCCCCeEEEeec---CCCCCcee----EEccCC----CEEEEEecCCCeEEEEEecCCC
Q 048181 178 TGRLLSYNPRSSQVTVLLR---NLTGPAGV----AISVDS----SFLLVSEFTGNRTLKYWLRGPR 232 (310)
Q Consensus 178 ~G~l~~~d~~~g~~~~~~~---~l~~pnGI----a~~~dg----~~Lyv~d~~~~~I~~~~~~~~~ 232 (310)
...||.+|.++|++...++ ....+||+ .++.|+ ..+|+.|. .+.||||++.+..
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAGK 286 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCSS
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCCC
Confidence 4579999998887544332 12346776 355443 37999985 7889999998643
No 350
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=33.58 E-value=3.6e+02 Score=26.55 Aligned_cols=164 Identities=14% Similarity=0.076 Sum_probs=81.0
Q ss_pred CCcceEEEccC-CCEEEEEeCCCeEEEEECCCc-eEEeeeecCCCCccccCCCccccCCCCCCceeeEEEecC-CCeEEE
Q 048181 34 FGGESIAFEPV-GGAFYTGVADGRILKYQAPDG-FTDFAFTTPTRSKAVCDGTTNLDLGPICRRTFGLALHYA-TRQLYI 110 (310)
Q Consensus 34 ~~Pegia~d~~-G~l~~~d~~~g~I~r~~~~g~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~P~Gla~d~~-~g~LyV 110 (310)
....+|+++|. .+++|+....+.|+|-+..|+ ++.+.. ......+ .......|++|+. .+.+|+
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~-----------~~~~~~~--~~~~i~~ia~dp~~~~~i~~ 81 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLND-----------FIEAQDM--NIMGTESIALDPNNPDRLYL 81 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCT-----------TCCGGGG--GGCSEEEEEEETTEEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECcc-----------CCCcccc--cCCceeEEEECCCCCCEEEE
Confidence 35678999985 356788777888999887764 443210 0000000 1123457888843 367888
Q ss_pred EeCC------CcEEEEeCCCCeE-EEeeccCC--C-ccc-cCccceEEeCCC-CeEEEEcCCCccCccceeEeeeecCCC
Q 048181 111 ADAY------SGLLVVGPNGRLA-TQLATGAE--G-QAF-HFLDGLDVDQGT-GVVYFTDASGVYDFRTIVKLNITNDST 178 (310)
Q Consensus 111 ad~~------~gi~~id~~~~~~-~~~~~~~~--g-~~~-~~pndvavd~~~-G~lyvtd~~~~~~~~~~~~~~~~~~~~ 178 (310)
+... .+|++=+ ++|+. +.+..... + .+- .....++++|.+ +.+|+....
T Consensus 82 ~~g~~~~~~~~~v~~S~-DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~------------------ 142 (789)
T 1sqj_A 82 AQGRYVGDEWAAFYVSE-DRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRT------------------ 142 (789)
T ss_dssp EECSCTTSSCCEEEEES-STTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSS------------------
T ss_pred EeCccCCCcccEEEEEC-CCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEecc------------------
Confidence 7532 3455554 44443 33321111 0 000 012468888742 567765311
Q ss_pred ceEEEEcCCCCeEEEeecC----C--CCCceeEEcc-CCCEEEEEecCCCeEEEEEecC
Q 048181 179 GRLLSYNPRSSQVTVLLRN----L--TGPAGVAISV-DSSFLLVSEFTGNRTLKYWLRG 230 (310)
Q Consensus 179 G~l~~~d~~~g~~~~~~~~----l--~~pnGIa~~~-dg~~Lyv~d~~~~~I~~~~~~~ 230 (310)
+.||+-+-....-+.+... . ..-..|+++| +++.||++......|++ ..|+
T Consensus 143 ~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~-S~Dg 200 (789)
T 1sqj_A 143 EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV-THDG 200 (789)
T ss_dssp SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE-ESST
T ss_pred CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE-EcCC
Confidence 2355543221222222210 0 1123567776 34578887654355554 3443
No 351
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=28.62 E-value=2.5e+02 Score=23.19 Aligned_cols=165 Identities=13% Similarity=0.118 Sum_probs=87.6
Q ss_pred eeEEEecCCCeEEEEeCC------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccceeE
Q 048181 97 FGLALHYATRQLYIADAY------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIVK 170 (310)
Q Consensus 97 ~Gla~d~~~g~LyVad~~------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~~ 170 (310)
.++++. +++|||.-.. ..++++|+.+++-+.+... .... .-..+++. ++.||+-.......
T Consensus 102 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~~~~--~~~iyv~GG~~~~~------ 168 (302)
T 2xn4_A 102 LGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM-NTRR--SSVGVGVV--GGLLYAVGGYDVAS------ 168 (302)
T ss_dssp CEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC-SSCC--BSCEEEEE--TTEEEEECCEETTT------
T ss_pred eEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC-CCcc--cCceEEEE--CCEEEEEeCCCCCC------
Confidence 355553 7899997432 1388999998776655322 2111 11233443 48999864321000
Q ss_pred eeeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEEecC-----CCeEEEEEecCCCCCceee-ecC
Q 048181 171 LNITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVSEFT-----GNRTLKYWLRGPRANSFDI-INF 241 (310)
Q Consensus 171 ~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~d~~-----~~~I~~~~~~~~~~g~~~~-~~l 241 (310)
......+++||+.+.+.+.+. .++.| -.++.. ++ .||+.--. .+.+++|++.. .+.+. ..+
T Consensus 169 ----~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~ 238 (302)
T 2xn4_A 169 ----RQCLSTVECYNATTNEWTYIA-EMSTRRSGAGVGVL-NN-LLYAVGGHDGPLVRKSVEVYDPTT---NAWRQVADM 238 (302)
T ss_dssp ----TEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE-TT-EEEEECCBSSSSBCCCEEEEETTT---TEEEEECCC
T ss_pred ----CccccEEEEEeCCCCcEEECC-CCccccccccEEEE-CC-EEEEECCCCCCcccceEEEEeCCC---CCEeeCCCC
Confidence 001246899999888776653 22222 133333 34 58886322 35799998753 33333 333
Q ss_pred CC--CCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEe
Q 048181 242 QA--KPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTIS 290 (310)
Q Consensus 242 ~g--~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~ 290 (310)
+. .-..+++- +|.||+....... .....+.+||++...=..+.
T Consensus 239 ~~~r~~~~~~~~---~~~i~v~GG~~~~---~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 239 NMCRRNAGVCAV---NGLLYVVGGDDGS---CNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SSCCBSCEEEEE---TTEEEEECCBCSS---SBCCCEEEEETTTTEEEECS
T ss_pred CCccccCeEEEE---CCEEEEECCcCCC---cccccEEEEcCCCCeEEECC
Confidence 31 11223333 5788887543210 01235889999866555553
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=27.80 E-value=4.2e+02 Score=25.54 Aligned_cols=173 Identities=10% Similarity=0.028 Sum_probs=93.8
Q ss_pred eEEEecC-CCeEEEEeCC-------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCcccee
Q 048181 98 GLALHYA-TRQLYIADAY-------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTIV 169 (310)
Q Consensus 98 Gla~d~~-~g~LyVad~~-------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~~ 169 (310)
.++.. . +++|||.-+. +.++++|+.+++.+.+.. .... ..-...++-. +|.||+-....
T Consensus 444 s~~~~-~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~-~p~~--R~~h~~~~~~-~~~iyv~GG~~-------- 510 (695)
T 2zwa_A 444 TFTTI-SRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS-LSHT--RFRHSACSLP-DGNVLILGGVT-------- 510 (695)
T ss_dssp EEEEE-TTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCC-CSBC--CBSCEEEECT-TSCEEEECCBC--------
T ss_pred EEEEE-ccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCC-CCCC--cccceEEEEc-CCEEEEECCCC--------
Confidence 45553 4 8899997431 238999999877665532 2111 1122344434 48999875321
Q ss_pred EeeeecCCCceEEEEcCCCCeEEEeecC--CC----CCceeEEccCCCEEEEEec-------CCCeEEEEEecCCCC---
Q 048181 170 KLNITNDSTGRLLSYNPRSSQVTVLLRN--LT----GPAGVAISVDSSFLLVSEF-------TGNRTLKYWLRGPRA--- 233 (310)
Q Consensus 170 ~~~~~~~~~G~l~~~d~~~g~~~~~~~~--l~----~pnGIa~~~dg~~Lyv~d~-------~~~~I~~~~~~~~~~--- 233 (310)
..+.+++||+.+.+.+.+... ++ ....++++.+.+.||+.-- ..+.+++|++....-
T Consensus 511 -------~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~ 583 (695)
T 2zwa_A 511 -------EGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEP 583 (695)
T ss_dssp -------SSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCC
T ss_pred -------CCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccc
Confidence 112699999988877665431 22 2234666666356888642 246799999875321
Q ss_pred Cceee-ecCC---CCCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCcEEEEEecC
Q 048181 234 NSFDI-INFQ---AKPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGAVLDTISFE 292 (310)
Q Consensus 234 g~~~~-~~l~---g~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~~~~~~~~p 292 (310)
-..+. ...| ..-..+++-. +|.||+...............+.+||++-..-..+.+|
T Consensus 584 ~~W~~~~~~p~~~R~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 584 ITVIKKLQHPLFQRYGSQIKYIT--PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp EEEEEEEECGGGCCBSCEEEEEE--TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred eEEEEcCCCCCCCcccceEEEeC--CCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 00221 2221 1223344443 48899874432110001124588899876555555555
No 353
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=23.15 E-value=3.3e+02 Score=22.68 Aligned_cols=165 Identities=11% Similarity=0.125 Sum_probs=84.5
Q ss_pred eEEEecCCCeEEEEeCC---------CcEEEEeCCCCeEEEeeccCCCccccCccceEEeCCCCeEEEEcCCCccCccce
Q 048181 98 GLALHYATRQLYIADAY---------SGLLVVGPNGRLATQLATGAEGQAFHFLDGLDVDQGTGVVYFTDASGVYDFRTI 168 (310)
Q Consensus 98 Gla~d~~~g~LyVad~~---------~gi~~id~~~~~~~~~~~~~~g~~~~~pndvavd~~~G~lyvtd~~~~~~~~~~ 168 (310)
+++.. +++|||.-.. +.++++|+.+++-+.+.. .+... .-..+++ - ++.||+-.....
T Consensus 93 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r--~~~~~~~-~-~~~iyv~GG~~~------ 159 (315)
T 4asc_A 93 GLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPYVV--YGHTVLS-H-MDLVYVIGGKGS------ 159 (315)
T ss_dssp EEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSSCC--BSCEEEE-E-TTEEEEECCBCT------
T ss_pred eEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCCcc--cceeEEE-E-CCEEEEEeCCCC------
Confidence 45553 7899997431 238999999877655432 22111 1123344 3 588998753210
Q ss_pred eEeeeecCCCceEEEEcCCCCeEEEeecCCCCC---ceeEEccCCCEEEEEecC-----CCeEEEEEecCCCCCceee-e
Q 048181 169 VKLNITNDSTGRLLSYNPRSSQVTVLLRNLTGP---AGVAISVDSSFLLVSEFT-----GNRTLKYWLRGPRANSFDI-I 239 (310)
Q Consensus 169 ~~~~~~~~~~G~l~~~d~~~g~~~~~~~~l~~p---nGIa~~~dg~~Lyv~d~~-----~~~I~~~~~~~~~~g~~~~-~ 239 (310)
.......+++||+.+.+.+.+. .++.| -+.+.. ++ .||+.--. ...+++|++.. .+.+. .
T Consensus 160 -----~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~ 228 (315)
T 4asc_A 160 -----DRKCLNKMCVYDPKKFEWKELA-PMQTARSLFGATVH-DG-RIIVAAGVTDTGLTSSAEVYSITD---NKWAPFE 228 (315)
T ss_dssp -----TSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE-TT-EEEEEEEECSSSEEEEEEEEETTT---TEEEEEC
T ss_pred -----CCcccceEEEEeCCCCeEEECC-CCCCchhceEEEEE-CC-EEEEEeccCCCCccceEEEEECCC---CeEEECC
Confidence 0112356999999888766654 23222 133333 44 58876322 23688888753 33333 3
Q ss_pred cCCC--CCceeeeCCCCCCcEEEEEecCC----CCC--CCCceeeEEECCCCcEEEEE
Q 048181 240 NFQA--KPHNIKRNPGLLQTFWEAAIITR----QPA--GTPVPIGQRISAFGAVLDTI 289 (310)
Q Consensus 240 ~l~g--~Pdgl~~d~~~dG~l~va~~~~~----~~~--~~~~~~v~~~~~~G~~~~~~ 289 (310)
.+|. .-..+++- +|.||+...... +.. +.....+.+||++-+.=..+
T Consensus 229 ~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 229 AFPQERSSLSLVSL---VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp CCSSCCBSCEEEEE---TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CCCCcccceeEEEE---CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 3331 11223333 468887644311 000 00113477899875543333
No 354
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=22.91 E-value=85 Score=17.85 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=12.2
Q ss_pred cceEEEccCCCEEEEEeCCC
Q 048181 36 GESIAFEPVGGAFYTGVADG 55 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g 55 (310)
..-..++++|..||++..++
T Consensus 10 gWe~~~~~~G~~Yy~nh~t~ 29 (38)
T 2law_A 10 GWEQAMTQDGEIYYINHKNK 29 (38)
T ss_dssp SCCEEEETTTEEEEEETTTT
T ss_pred CcEEEECCCCCEEEEECCCC
Confidence 34455667777777765444
No 355
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=22.54 E-value=1.2e+02 Score=17.80 Aligned_cols=21 Identities=14% Similarity=0.283 Sum_probs=13.5
Q ss_pred cceEEEccCCCEEEEEeCCCe
Q 048181 36 GESIAFEPVGGAFYTGVADGR 56 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~ 56 (310)
..-..++++|+.||++..++.
T Consensus 11 GWe~~~~~~G~~Yy~nh~t~~ 31 (42)
T 2djy_A 11 GWEIRNTATGRVYFVDHNNRT 31 (42)
T ss_dssp SEEEEECSSSCEEEEETTTTE
T ss_pred CcEEEECCCCCEEEEECCCCC
Confidence 344566777888888765443
No 356
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=22.36 E-value=2.5e+02 Score=26.81 Aligned_cols=20 Identities=15% Similarity=0.049 Sum_probs=16.7
Q ss_pred CeEEEEeCCCcEEEEeCCCC
Q 048181 106 RQLYIADAYSGLLVVGPNGR 125 (310)
Q Consensus 106 g~LyVad~~~gi~~id~~~~ 125 (310)
..+|+.|....|||+|..+.
T Consensus 266 D~~YaGDl~GnlWRfDl~~~ 285 (570)
T 3hx6_A 266 DYAYAGDLQGNLWRFDLIAG 285 (570)
T ss_dssp CEEEEEETTSEEEEEECSCS
T ss_pred eEEEEEeCCCcEEEEEcCCC
Confidence 36999999888999998654
No 357
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=21.60 E-value=1.2e+02 Score=17.45 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=14.0
Q ss_pred cceEEEccCCCEEEEEeCCCe
Q 048181 36 GESIAFEPVGGAFYTGVADGR 56 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~ 56 (310)
..-..++++|..||++..++.
T Consensus 11 gWe~~~~~~G~~Yy~nh~t~~ 31 (40)
T 2ysf_A 11 GWEMRFTVDGIPYFVDHNRRT 31 (40)
T ss_dssp SEEEEECTTCCEEEEETTTCC
T ss_pred CcEEEEcCCCCEEEEECCCCc
Confidence 444567778888888765443
No 358
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=21.56 E-value=1.2e+02 Score=18.09 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=15.0
Q ss_pred CcceEEEccCCCEEEEEeCCCe
Q 048181 35 GGESIAFEPVGGAFYTGVADGR 56 (310)
Q Consensus 35 ~Pegia~d~~G~l~~~d~~~g~ 56 (310)
...-..++++|..||++..++.
T Consensus 14 ~gWe~~~~~~G~~Yyinh~t~~ 35 (46)
T 2l4j_A 14 EGWEQAITPEGEIYYINHKNKT 35 (46)
T ss_dssp TTCEEEECTTSCEEEEETTTTE
T ss_pred cCceeEECCCCCEEEEECCCCC
Confidence 3455667888888888765543
No 359
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=21.29 E-value=1.2e+02 Score=16.83 Aligned_cols=19 Identities=11% Similarity=0.263 Sum_probs=12.3
Q ss_pred ceEEEccCCCEEEEEeCCC
Q 048181 37 ESIAFEPVGGAFYTGVADG 55 (310)
Q Consensus 37 egia~d~~G~l~~~d~~~g 55 (310)
.-...|++|+.||++...+
T Consensus 9 We~~~d~~G~~Yy~n~~t~ 27 (36)
T 1wr3_A 9 WEEKVDNLGRTYYVNHNNR 27 (36)
T ss_dssp EEEEECSSSCEEEEETTTC
T ss_pred CEEEECCCCCEEEEECCCC
Confidence 3455677788788775544
No 360
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=21.12 E-value=1.2e+02 Score=17.42 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=13.6
Q ss_pred cceEEEccCCCEEEEEeCCCe
Q 048181 36 GESIAFEPVGGAFYTGVADGR 56 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~ 56 (310)
..-..+|++|+.||++..++.
T Consensus 12 gWe~~~~~~G~~Yy~n~~t~~ 32 (41)
T 1wr7_A 12 GWEMRIAPNGRPFFIDHNTKT 32 (41)
T ss_dssp TEEEEECTTSCEEEEETTTTE
T ss_pred CcEEEEcCCCCEEEEECCCCC
Confidence 344567777888888765443
No 361
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=21.03 E-value=1.3e+02 Score=17.45 Aligned_cols=20 Identities=15% Similarity=0.079 Sum_probs=12.0
Q ss_pred ceEEEccCCCEEEEEeCCCe
Q 048181 37 ESIAFEPVGGAFYTGVADGR 56 (310)
Q Consensus 37 egia~d~~G~l~~~d~~~g~ 56 (310)
.-...|++|+.||.+...+.
T Consensus 13 W~~~~~~~Gr~YY~n~~T~~ 32 (43)
T 1ymz_A 13 WERRTDVEGKVYYFNVRTLT 32 (43)
T ss_dssp EEEEECTTSCEEEEETTTTE
T ss_pred CEEEECCCCCEEEEECCCCC
Confidence 34456667777777655443
No 362
>2lc4_A PILP protein; type IV pilus, structural protein; NMR {Pseudomonas aeruginosa}
Probab=20.95 E-value=2.2e+02 Score=20.74 Aligned_cols=61 Identities=5% Similarity=-0.176 Sum_probs=35.6
Q ss_pred CCceeeeCCCCCCcEEEEEecCCCCCCCCceeeEEECCCCc-EEEEEecCCCccccceeEEEecCCC
Q 048181 244 KPHNIKRNPGLLQTFWEAAIITRQPAGTPVPIGQRISAFGA-VLDTISFEAQYSTTPISEVQPFGGA 309 (310)
Q Consensus 244 ~Pdgl~~d~~~dG~l~va~~~~~~~~~~~~~~v~~~~~~G~-~~~~~~~p~~~~~~~~t~~~~~~~~ 309 (310)
.+.+|-. + +|.+|..-.+..-+ ..+++|++++++.- +.+.+.+..|--+.+.+...-.+|.
T Consensus 42 ~~~ALV~-~--dG~vyrVk~G~ylG--~n~GrI~~It~~~I~l~E~v~Dg~G~W~eR~~~L~L~~~~ 103 (111)
T 2lc4_A 42 GTFALVK-G--AGGVHRVRVGDYLG--RNDGKVVGISEGKIDVIEIVPDGEGNWLERPRSLTLKERS 103 (111)
T ss_dssp EEEEEEE-E--TTEEEEEETTCEET--TTTEEEEEECSSEEEEEEEEECSSSCEEEEEEEEEBCCSC
T ss_pred eEEEEEE-e--CCcEEEEccCCEec--cCCCEEEEEeCCeEEEEEEEECCCCCEEEeeeEEEeCCCc
Confidence 3555555 6 78887765554211 23478899998874 6666677544224555555544443
No 363
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=20.72 E-value=1.2e+02 Score=17.35 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=14.1
Q ss_pred cceEEEccCCCEEEEEeCCCe
Q 048181 36 GESIAFEPVGGAFYTGVADGR 56 (310)
Q Consensus 36 Pegia~d~~G~l~~~d~~~g~ 56 (310)
..-...+++|..||++..++.
T Consensus 11 gWe~~~~~~Gr~Yy~nh~t~~ 31 (40)
T 2ysg_A 11 GWEEAYTADGIKYFINHVTQT 31 (40)
T ss_dssp TEEEEECSSSCEEEEESSSCC
T ss_pred CcEEEEcCCCCEEEEECCCCc
Confidence 345567778888888765543
Done!