Query         048184
Match_columns 512
No_of_seqs    187 out of 1978
Neff          11.0
Searched_HMMs 46136
Date          Fri Mar 29 07:10:36 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048184.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048184hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0   4E-80 8.6E-85  593.3  44.0  440   45-505    25-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 1.5E-73 3.3E-78  568.5  45.4  447   45-504    27-498 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.7E-73 3.7E-78  570.1  44.6  453   46-510    57-539 (543)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 3.3E-73 7.2E-78  566.4  44.5  449   46-505    34-509 (517)
  5 PLN03112 cytochrome P450 famil 100.0 4.9E-73 1.1E-77  566.4  45.8  458   46-510    32-513 (514)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 7.8E-73 1.7E-77  560.1  45.7  457   38-510    23-502 (504)
  7 PLN02183 ferulate 5-hydroxylas 100.0 3.4E-73 7.4E-78  566.2  43.3  447   42-504    32-511 (516)
  8 KOG0158 Cytochrome P450 CYP3/C 100.0 8.8E-73 1.9E-77  533.5  37.0  438   43-505    28-499 (499)
  9 PTZ00404 cytochrome P450; Prov 100.0 1.9E-71 4.2E-76  550.9  41.2  436   43-504    26-482 (482)
 10 PLN02966 cytochrome P450 83A1  100.0 5.7E-71 1.2E-75  548.8  42.4  446   46-504    29-499 (502)
 11 PLN00168 Cytochrome P450; Prov 100.0 1.8E-70 3.9E-75  547.0  43.7  447   45-506    34-518 (519)
 12 PLN02394 trans-cinnamate 4-mon 100.0 3.9E-70 8.5E-75  544.5  45.9  446   46-505    30-502 (503)
 13 PLN02655 ent-kaurene oxidase   100.0 9.4E-70   2E-74  535.0  41.5  440   48-506     1-465 (466)
 14 PLN02290 cytokinin trans-hydro 100.0 1.5E-69 3.2E-74  541.6  40.1  434   46-506    42-516 (516)
 15 PLN03018 homomethionine N-hydr 100.0 1.2E-67 2.6E-72  523.7  46.2  449   46-505    40-524 (534)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 5.9E-68 1.3E-72  520.6  34.7  435   44-505    33-496 (497)
 17 PLN02774 brassinosteroid-6-oxi 100.0 2.5E-67 5.3E-72  517.4  38.2  411   43-503    28-462 (463)
 18 PLN02500 cytochrome P450 90B1  100.0 1.9E-67 4.1E-72  522.5  37.1  415   45-503    37-488 (490)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 3.5E-67 7.5E-72  483.2  33.3  439   46-506    50-519 (519)
 20 PLN02196 abscisic acid 8'-hydr 100.0 7.8E-67 1.7E-71  513.4  37.9  435   15-504     3-462 (463)
 21 PF00067 p450:  Cytochrome P450 100.0 1.5E-68 3.3E-73  532.5  25.4  435   48-501     1-463 (463)
 22 PLN02738 carotene beta-ring hy 100.0 3.9E-66 8.4E-71  518.0  38.5  442   41-506   110-596 (633)
 23 PLN02169 fatty acid (omega-1)- 100.0 1.2E-65 2.7E-70  507.6  39.8  433   46-504    31-499 (500)
 24 PLN03195 fatty acid omega-hydr 100.0 2.5E-65 5.4E-70  510.7  39.1  436   48-505    32-516 (516)
 25 PLN02302 ent-kaurenoic acid ox 100.0 1.4E-64 3.1E-69  504.4  40.9  418   44-506    40-489 (490)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 6.5E-65 1.4E-69  499.1  35.8  417   43-506     4-451 (452)
 27 KOG0684 Cytochrome P450 [Secon 100.0 2.6E-64 5.6E-69  452.3  33.0  424   46-505    31-485 (486)
 28 PLN02987 Cytochrome P450, fami 100.0 1.1E-63 2.3E-68  489.1  39.7  412   46-505    30-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 6.3E-63 1.4E-67  488.6  36.3  432   47-505    13-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 3.1E-61 6.8E-66  475.4  37.4  428   53-505    48-500 (502)
 31 PLN02648 allene oxide synthase 100.0 2.5E-55 5.4E-60  426.4  23.4  403   46-476    17-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0   1E-47 2.2E-52  369.2  29.7  363   67-504    24-410 (411)
 33 PF12273 RCR:  Chitin synthesis  78.6     3.1 6.8E-05   32.9   3.9   22   18-39      3-24  (130)
 34 PHA03049 IMV membrane protein;  75.2     7.4 0.00016   25.8   4.0   34   17-50      2-35  (68)
 35 KOG3653 Transforming growth fa  66.9      32  0.0007   33.4   8.0   48   66-113   210-258 (534)
 36 PF05961 Chordopox_A13L:  Chord  65.0      16 0.00036   24.4   4.0   29   17-45      2-30  (68)
 37 KOG0114 Predicted RNA-binding   51.2      67  0.0015   24.0   5.6   58   46-105    12-75  (124)
 38 KOG3506 40S ribosomal protein   49.6     7.7 0.00017   24.6   0.6   11  438-448    12-22  (56)
 39 PHA03054 IMV membrane protein;  48.3      53  0.0011   22.3   4.3   24   15-38     45-68  (72)
 40 PF12273 RCR:  Chitin synthesis  47.6      13 0.00028   29.4   1.8   39   20-62      2-40  (130)
 41 PRK11486 flagellar biosynthesi  47.0 1.2E+02  0.0025   23.8   6.7   25   81-105    68-92  (124)
 42 PF09201 SRX:  SRX;  InterPro:   45.9      17 0.00037   28.4   2.1   23  445-467    18-40  (148)
 43 PHA02819 hypothetical protein;  38.9      88  0.0019   21.3   4.3   20   19-38     47-66  (71)
 44 PF12444 Sox_N:  Sox developmen  38.4      21 0.00044   25.5   1.4   21  455-475    60-80  (84)
 45 PF12508 DUF3714:  Protein of u  38.3      19 0.00042   30.7   1.6   43  355-400    51-94  (200)
 46 COG3190 FliO Flagellar biogene  35.5      92   0.002   24.7   4.7   21   81-101    74-94  (137)
 47 TIGR03779 Bac_Flav_CT_M Bacter  33.8     8.1 0.00018   36.9  -1.5   44  355-401   254-298 (410)
 48 PRK06789 flagellar motor switc  33.6      37 0.00079   23.6   2.0   39  363-401    22-62  (74)
 49 PHA02844 putative transmembran  30.1 1.5E+02  0.0033   20.4   4.4   20   19-38     49-68  (75)
 50 PF12669 P12:  Virus attachment  28.6      71  0.0015   21.0   2.7    6   36-41     18-23  (58)
 51 PHA03162 hypothetical protein;  27.8      44 0.00096   25.9   1.8   25  441-465     2-26  (135)
 52 PF14483 Cut8_M:  Cut8 dimerisa  27.8   1E+02  0.0022   18.2   2.9   25  312-336     9-35  (38)
 53 KOG4152 Host cell transcriptio  27.2      45 0.00097   32.7   2.1   30   34-63    115-144 (830)
 54 PF13893 RRM_5:  RNA recognitio  26.8 1.2E+02  0.0026   19.2   3.6   35   71-105     1-39  (56)
 55 PF14550 Peptidase_U35_2:  Puta  26.7      38 0.00082   26.3   1.3   21  380-400    72-92  (122)
 56 PLN03134 glycine-rich RNA-bind  26.0 2.3E+02   0.005   22.8   5.8   49   56-106    38-95  (144)
 57 PLN03120 nucleic acid binding   25.6 2.9E+02  0.0063   24.9   6.7   58   56-115     8-71  (260)
 58 PF11027 DUF2615:  Protein of u  25.5 1.5E+02  0.0032   22.2   4.1   12   22-33     60-71  (103)
 59 KOG4767 Cytochrome c oxidase,   25.5      79  0.0017   26.6   3.0   43    2-44     13-55  (231)
 60 PF15050 SCIMP:  SCIMP protein   25.3 1.1E+02  0.0024   23.3   3.5   14   28-41     24-37  (133)
 61 COG1759 5-formaminoimidazole-4  25.1 1.1E+02  0.0024   28.2   4.0   69  360-461   276-351 (361)
 62 PRK13664 hypothetical protein;  24.3 1.7E+02  0.0036   19.0   3.5   17   23-39     12-28  (62)
 63 PF14316 DUF4381:  Domain of un  24.1 1.7E+02  0.0037   23.6   4.8    6  136-141    95-100 (146)
 64 COG5329 Phosphoinositide polyp  23.8      51  0.0011   33.0   1.9   37   54-90    282-318 (570)
 65 PF14459 Prok-E2_C:  Prokaryoti  23.8      27 0.00059   25.9   0.1   18  433-450   103-120 (131)
 66 PF01708 Gemini_mov:  Geminivir  23.0 1.2E+02  0.0026   21.9   3.1   19   21-39     41-59  (91)
 67 PF05084 GRA6:  Granule antigen  22.9 1.6E+02  0.0034   23.8   4.1   15   45-59    176-193 (215)
 68 TIGR02736 cbb3_Q_epsi cytochro  22.9 1.5E+02  0.0034   19.1   3.2   21   21-41      5-25  (56)
 69 PF13980 UPF0370:  Uncharacteri  22.7 1.7E+02  0.0036   19.1   3.3   20   20-39      8-27  (63)
 70 PF06679 DUF1180:  Protein of u  22.7 1.5E+02  0.0033   24.5   4.1   21   19-39     98-118 (163)
 71 PF00076 RRM_1:  RNA recognitio  21.3 2.5E+02  0.0054   18.3   5.7   47   57-105     3-57  (70)
 72 PF13625 Helicase_C_3:  Helicas  21.2 2.1E+02  0.0046   22.4   4.7   41   65-107    74-114 (129)
 73 PF15330 SIT:  SHP2-interacting  21.0 2.4E+02  0.0052   21.4   4.6   10   54-63     46-55  (107)
 74 PF05952 ComX:  Bacillus compet  20.3      79  0.0017   20.7   1.6   16  323-338     8-23  (57)
 75 PF11138 DUF2911:  Protein of u  20.2      70  0.0015   25.8   1.7   21  382-402    53-73  (145)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4e-80  Score=593.26  Aligned_cols=440  Identities=43%  Similarity=0.710  Sum_probs=387.1

Q ss_pred             CCCCCCCCCCceeeeccccCCC-ccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc-hhhhhh
Q 048184           45 LLPPPGPKPWHLIVNLNLIGQN-LHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP-LLAWKH  122 (512)
Q Consensus        45 ~~~ppgP~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~-~~~~~~  122 (512)
                      .+.||||+++|++||++++... +|+.+.+|.++|||||++++|..++|||+|++.++|++.+++..|+.|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            5789999999999999999665 99999999999999999999999999999999999999999999999998 334466


Q ss_pred             hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184          123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI  202 (512)
Q Consensus       123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~  202 (512)
                      ..+++.+++++.+|+.|+.+||+....+++...++.+...-.++++.+++.+.+ .+     .+++||+...+...+.++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~-----~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK-----KGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC-----CCceeeHHHHHHHHHHHH
Confidence            677789999998999999999999999999999999888889999999999987 22     228999999999999999


Q ss_pred             HHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccc-ccccccc-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 048184          203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIP-WLAFLDL-QGNIKRMKAVKKKIDKFYEHVLHEHE  280 (512)
Q Consensus       203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~  280 (512)
                      |++++||.++...+   .....++..++.+.....+.+.+.+++| ++.+++. .+..+++.....++..+++++|++++
T Consensus       179 I~~~~fG~rf~~~~---~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~  255 (489)
T KOG0156|consen  179 ICRMLFGRRFEEED---EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHR  255 (489)
T ss_pred             HHHHHhCCccccCC---chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998742   2234668888999998888888899999 6777642 45667777777789999999999998


Q ss_pred             HhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHH
Q 048184          281 RHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDR  340 (512)
Q Consensus       281 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~  340 (512)
                      +.. +   + +...|++|.+++..++++... ++++++..++                    +|+.||++|+|+++||++
T Consensus       256 ~~~-~---~-~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~  329 (489)
T KOG0156|consen  256 EKI-G---D-EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDE  329 (489)
T ss_pred             hhh-c---c-CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            875 1   1 222899999999987654232 8999998876                    999999999999999999


Q ss_pred             HhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 048184          341 VIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCP  420 (512)
Q Consensus       341 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  420 (512)
                      ++|.++.++.+|+.+||||+|||+||+|++|++|...||.+.+|+.|+||.|||||.|+++.|++|+||++|+||++|+|
T Consensus       330 vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~P  409 (489)
T KOG0156|consen  330 VVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKP  409 (489)
T ss_pred             HhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccCh
Confidence            99998889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceee
Q 048184          421 ERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVV  500 (512)
Q Consensus       421 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  500 (512)
                      |||++++ +.......++|||.|+|.|||..+|.+|+.++++.||++|||++..+    .+++... +.++..+.++.+.
T Consensus       410 ERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~  483 (489)
T KOG0156|consen  410 ERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAV  483 (489)
T ss_pred             hhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceee
Confidence            9999974 22336789999999999999999999999999999999999999876    3444445 3667777788888


Q ss_pred             eccCC
Q 048184          501 PKPRL  505 (512)
Q Consensus       501 ~~~R~  505 (512)
                      ..+|.
T Consensus       484 ~~~r~  488 (489)
T KOG0156|consen  484 PVPRL  488 (489)
T ss_pred             eecCC
Confidence            88773


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.5e-73  Score=568.46  Aligned_cols=447  Identities=38%  Similarity=0.645  Sum_probs=363.3

Q ss_pred             CCCCCCCCCCceeeeccccC-CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh
Q 048184           45 LLPPPGPKPWHLIVNLNLIG-QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA  123 (512)
Q Consensus        45 ~~~ppgP~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~  123 (512)
                      .+.||||+++|++||++.+. .+++.++.+++++||++|++++|+.++|+++||+++++|+.++...|.+++........
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~  106 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTM  106 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhh
Confidence            36699999999999999884 47889999999999999999999999999999999999999888889888765443332


Q ss_pred             ccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHH
Q 048184          124 NYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIM  203 (512)
Q Consensus       124 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~  203 (512)
                      .+.+..+.+...++.|+++|+.+..++|++.+++.+.+.+.++++++++.+.....     +++++|+.+++..+++|++
T Consensus       107 ~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~-----~~~~vd~~~~~~~~t~dvi  181 (499)
T PLN03234        107 SYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD-----QSGTVDLSELLLSFTNCVV  181 (499)
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc-----CCCeEEHHHHHHHHHHHHH
Confidence            32233444556689999999986579999999999999999999999999976544     4568999999999999999


Q ss_pred             HHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048184          204 SRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLD-LQGNIKRMKAVKKKIDKFYEHVLHEHERH  282 (512)
Q Consensus       204 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  282 (512)
                      +.++||.+++..+    .....+.+.+...............+|++.++. ..+..++..++.+.+.+++.++|+++++.
T Consensus       182 ~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~  257 (499)
T PLN03234        182 CRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP  257 (499)
T ss_pred             HHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999986543    123455555554443333333344556654432 12334677888999999999999987654


Q ss_pred             cccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHh
Q 048184          283 GKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVI  342 (512)
Q Consensus       283 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      ...    +....|+++.+++...++..+..++++++..++                    +|++||++|+|+++|+++++
T Consensus       258 ~~~----~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~  333 (499)
T PLN03234        258 NRP----KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVI  333 (499)
T ss_pred             ccc----CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            311    123578999998765433222368899988765                    89999999999999999999


Q ss_pred             cCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCC-CCCCCCCCC
Q 048184          343 GRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLW-EKPNEFCPE  421 (512)
Q Consensus       343 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~  421 (512)
                      ++.+.++++++++|||++|||+||||++|++++..+|.+.+|++++||.|||||.|.++.+.+||||++| +||++|+||
T Consensus       334 ~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~Pe  413 (499)
T PLN03234        334 GDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE  413 (499)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCch
Confidence            8877789999999999999999999999999997679999999999999999999999999999999999 899999999


Q ss_pred             CCCCCCCC--cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCcee
Q 048184          422 RFVGKEID--VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLV  499 (512)
Q Consensus       422 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  499 (512)
                      ||+++...  ....+..|+|||+|+|.|+|++||+.|+++++|.|+++|+|++.++..++.......+|++..|++.+.+
T Consensus       414 R~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (499)
T PLN03234        414 RFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVL  493 (499)
T ss_pred             hhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEE
Confidence            99975432  1234678999999999999999999999999999999999999876544555566677888888888888


Q ss_pred             eeccC
Q 048184          500 VPKPR  504 (512)
Q Consensus       500 ~~~~R  504 (512)
                      .+++|
T Consensus       494 ~~~~~  498 (499)
T PLN03234        494 APTKH  498 (499)
T ss_pred             EeecC
Confidence            88776


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.7e-73  Score=570.08  Aligned_cols=453  Identities=30%  Similarity=0.511  Sum_probs=352.8

Q ss_pred             CCCCCCCCCceeeeccccC-C-CccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh
Q 048184           46 LPPPGPKPWHLIVNLNLIG-Q-NLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH  122 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~-~-~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~  122 (512)
                      +.||||+++|++||++.+. + ..+.++.+|.++|| +||++++|++++|+|+||+.+++++.+++..|.+|+.......
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~  136 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKI  136 (543)
T ss_pred             CCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhh
Confidence            6899999999999998873 2 24678999999999 8999999999999999999999999988888998875433322


Q ss_pred             hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184          123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI  202 (512)
Q Consensus       123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~  202 (512)
                      ...+..++++..+|+.|+++||.+..+++++..++.+.+.+.++++.+++.+.....     +++++|+.+.+..+++++
T Consensus       137 l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~t~~v  211 (543)
T PLN02971        137 LSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK-----NSEPVDLRFVTRHYCGNA  211 (543)
T ss_pred             ccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCceehHHHHHHHHHHH
Confidence            222223456667799999999999667777777778889999999999888765433     456799999999999999


Q ss_pred             HHHHHhccccCcccc--cCCCChhHHHHHHHHHHhcc---CCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 048184          203 MSRMLFGKRYTEEDE--NNIVTPKQFTEIVDELFLLP---GVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLH  277 (512)
Q Consensus       203 ~~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  277 (512)
                      ++.++||.++...+.  ..... .++...++.++...   ....+..++|++++++..+..+...+..+.+.+++..+|+
T Consensus       212 i~~~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  290 (543)
T PLN02971        212 IKRLMFGTRTFSEKTEPDGGPT-LEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIID  290 (543)
T ss_pred             HHHHHhCCcccccccccccchh-HHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            999999998743210  00111 12222233322211   1122345567666543223334556667788899999998


Q ss_pred             HHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHH
Q 048184          278 EHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDE  337 (512)
Q Consensus       278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~E  337 (512)
                      ++++..+.+  +.....|+++.|++..++++ ...++++++..++                    +|+.||++|+|+++|
T Consensus       291 ~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  367 (543)
T PLN02971        291 ERIKMWREG--KRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEE  367 (543)
T ss_pred             HHHHHHhcc--CCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            876543211  11234699999998654321 2248888887766                    999999999999999


Q ss_pred             HHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCC
Q 048184          338 LDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNE  417 (512)
Q Consensus       338 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  417 (512)
                      |+++++.++.++.+++++|||++|||+|+||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       368 I~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~  447 (543)
T PLN02971        368 IDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLS  447 (543)
T ss_pred             HHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccc
Confidence            99999987889999999999999999999999999998778999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC--cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCC
Q 048184          418 FCPERFVGKEID--VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKN  495 (512)
Q Consensus       418 F~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (512)
                      |+||||++++.+  ....+..|+|||.|+|.|+|++||+.|+++++++||++|+|++.++.  ..+++.+.++ ++.-++
T Consensus       448 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~  524 (543)
T PLN02971        448 FKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSK  524 (543)
T ss_pred             cCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccc
Confidence            999999975432  11245689999999999999999999999999999999999987653  3456656666 664555


Q ss_pred             CceeeeccCCCCCCC
Q 048184          496 PLLVVPKPRLPLDLY  510 (512)
Q Consensus       496 ~~~v~~~~R~~~~~~  510 (512)
                      ++.|.+++|-.+.+|
T Consensus       525 ~~~~~~~~~~~~~~~  539 (543)
T PLN02971        525 PLVMVGELRLSEDLY  539 (543)
T ss_pred             cceeeeeecCCcccc
Confidence            999999999777666


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.3e-73  Score=566.37  Aligned_cols=449  Identities=39%  Similarity=0.734  Sum_probs=363.7

Q ss_pred             CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhcc
Q 048184           46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANY  125 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  125 (512)
                      +.||||+++|++||++.+..+++.++.+|+++||+||++++|++++++++||+.+++++.++...|.+++..........
T Consensus        34 ~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~  113 (517)
T PLN02687         34 PLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAY  113 (517)
T ss_pred             CCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhcc
Confidence            57999999999999988877799999999999999999999999999999999999999988788888865443333333


Q ss_pred             CCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHH
Q 048184          126 NYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSR  205 (512)
Q Consensus       126 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~  205 (512)
                      .+.+++++.+|+.|+++||.+..++|+.++++.+.+.+.++++++++.|....      +++++|+.+++..+++|+++.
T Consensus       114 ~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~------~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        114 NYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH------GTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             CCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHHHHHHH
Confidence            33466677679999999999943899999999999999999999999997641      346799999999999999999


Q ss_pred             HHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 048184          206 MLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKR  285 (512)
Q Consensus       206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  285 (512)
                      ++||.++...+.  ......+...+..+............+|++.++.+....++..+..+.+.+++.++++++++..+.
T Consensus       188 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  265 (517)
T PLN02687        188 AMVGRRVFAGDG--DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT  265 (517)
T ss_pred             HHhCccccccCC--cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999754221  112345666666665443333333566766665433334566777888999999999998776421


Q ss_pred             ccccCCCcccHHHHHhcccCCc---cccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHh
Q 048184          286 KLFKEHGTNDIVDVLLQLADDP---TLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVI  342 (512)
Q Consensus       286 ~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      .   .....|+++.+++...++   ..+..++++++..++                    +|++||++|+|+++||++++
T Consensus       266 ~---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        266 G---SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             c---CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence            1   133569999999875432   113368888887765                    89999999999999999999


Q ss_pred             cCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 048184          343 GRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPER  422 (512)
Q Consensus       343 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  422 (512)
                      +.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++.+.+|+|+++|+||++|+|||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence            87777899999999999999999999999999877899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCc----ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCce
Q 048184          423 FVGKEIDV----VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLL  498 (512)
Q Consensus       423 ~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (512)
                      |++++...    ...+..|+|||+|+|.|+|++||+.|++++++.||++|+|++.++...++.+....++.++.+..++.
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLM  502 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeE
Confidence            99753211    12356899999999999999999999999999999999999987643223333345566677778999


Q ss_pred             eeeccCC
Q 048184          499 VVPKPRL  505 (512)
Q Consensus       499 v~~~~R~  505 (512)
                      +++++|.
T Consensus       503 ~~~~~R~  509 (517)
T PLN02687        503 VHPRPRL  509 (517)
T ss_pred             EeeccCC
Confidence            9999993


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4.9e-73  Score=566.39  Aligned_cols=458  Identities=37%  Similarity=0.663  Sum_probs=366.5

Q ss_pred             CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhcc
Q 048184           46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANY  125 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  125 (512)
                      +.||||+++|++||++++..+++.++.+++++||++|+++++++++++++||+.+++++.++...|.+++.........+
T Consensus        32 ~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~  111 (514)
T PLN03112         32 RLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAY  111 (514)
T ss_pred             CCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeecc
Confidence            67999999999999998877789999999999999999999999999999999999999888888888765433222222


Q ss_pred             CCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHH
Q 048184          126 NYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSR  205 (512)
Q Consensus       126 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~  205 (512)
                      +...+++..+|+.|+++|+.+..+.|+.++++.+.+.+.++++.+++.+.....     .+.++|+.++++.+++++++.
T Consensus       112 g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~-----~~~~vd~~~~~~~~~~~vi~~  186 (514)
T PLN03112        112 GCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ-----TGKPVNLREVLGAFSMNNVTR  186 (514)
T ss_pred             CCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc-----cCCeeeHHHHHHHHHHHHHHH
Confidence            223344556799999999997568999999999999999999999998765433     456899999999999999999


Q ss_pred             HHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 048184          206 MLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKR  285 (512)
Q Consensus       206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  285 (512)
                      ++||.++....+........+...+..+........+..++|++.++.+.+..++..+..+.+.+++..+++++++..+.
T Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  266 (514)
T PLN03112        187 MLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSG  266 (514)
T ss_pred             HHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999875432111122355666666655443333344566776665444444667778888999999999987765321


Q ss_pred             ccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCC
Q 048184          286 KLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRN  345 (512)
Q Consensus       286 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~  345 (512)
                      . .......|+++.++++..+++ ...++++++...+                    +|+.||++|+|+++||+++++.+
T Consensus       267 ~-~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  344 (514)
T PLN03112        267 K-LPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRN  344 (514)
T ss_pred             c-ccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCC
Confidence            1 011234699999998654331 2257888887655                    99999999999999999999887


Q ss_pred             ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCC
Q 048184          346 KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVG  425 (512)
Q Consensus       346 ~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~  425 (512)
                      +.++.+++++|||++|||+||||++|++++..+|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+||||..
T Consensus       345 ~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~  424 (514)
T PLN03112        345 RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWP  424 (514)
T ss_pred             CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCC
Confidence            77999999999999999999999999999877799999999999999999999999999999999999999999999875


Q ss_pred             CCCCc----ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184          426 KEIDV----VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP  501 (512)
Q Consensus       426 ~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  501 (512)
                      +.+..    ......|+|||+|+|.|+|++||+.|++++++.||++|||++.++...++......++++..+++++++++
T Consensus       425 ~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (514)
T PLN03112        425 AEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVA  504 (514)
T ss_pred             CCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEe
Confidence            43211    12345899999999999999999999999999999999999976532334444445577777888999999


Q ss_pred             ccCCCCCCC
Q 048184          502 KPRLPLDLY  510 (512)
Q Consensus       502 ~~R~~~~~~  510 (512)
                      +||.+..+|
T Consensus       505 ~~r~~~~~~  513 (514)
T PLN03112        505 TPRLAPHLY  513 (514)
T ss_pred             ecCCccccc
Confidence            999877665


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=7.8e-73  Score=560.12  Aligned_cols=457  Identities=38%  Similarity=0.693  Sum_probs=366.2

Q ss_pred             HHhhcCCCCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCch
Q 048184           38 IFRNKINLLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPL  117 (512)
Q Consensus        38 ~~~~~~~~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~  117 (512)
                      .+....+.+.||||+++|++||++.+..+++.++.+++++||+||++++|++++|+|+||+.+++++.++...|..++..
T Consensus        23 ~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~  102 (504)
T PLN00110         23 SLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPN  102 (504)
T ss_pred             HHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCc
Confidence            34445555789999999999999888767899999999999999999999999999999999999999887788888754


Q ss_pred             hhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHH
Q 048184          118 LAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFM  197 (512)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~  197 (512)
                      ........++.+++++.+|+.|+++|+.+..+.|+++.++.+.+.+.+++..+++.+.+...     +++++|+.+++..
T Consensus       103 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~-----~g~~~~~~~~~~~  177 (504)
T PLN00110        103 AGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ-----RGEPVVVPEMLTF  177 (504)
T ss_pred             cchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc-----CCCcEeHHHHHHH
Confidence            43332223334556666799999999999545899999999999999999999999876543     4568999999999


Q ss_pred             HHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 048184          198 FNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLH  277 (512)
Q Consensus       198 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  277 (512)
                      +++|+++.++||.++....   ......+...+...........+...+|++.+++.....++..+..+.+.+++.++++
T Consensus       178 ~~~~vi~~~~fg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  254 (504)
T PLN00110        178 SMANMIGQVILSRRVFETK---GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIE  254 (504)
T ss_pred             HHHHHHHHHHhCCcccccC---chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999872211   0122456666666554333333345667666543333345666778888899999998


Q ss_pred             HHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHH
Q 048184          278 EHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDE  337 (512)
Q Consensus       278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~E  337 (512)
                      ++++....    .....|+++.+++...+.. +..++++++..++                    +|+.||++|+|+++|
T Consensus       255 ~~~~~~~~----~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~E  329 (504)
T PLN00110        255 EHTASAHE----RKGNPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEE  329 (504)
T ss_pred             HHHhhccc----cccCCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            87764311    1234689999997653321 3368888887665                    999999999999999


Q ss_pred             HHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCC
Q 048184          338 LDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNE  417 (512)
Q Consensus       338 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  417 (512)
                      ++++++.++.++.+++++||||+|||+||||++|++++..+|.+.+|++++||.|||||.|.++.+++|+|+++|+||++
T Consensus       330 i~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~  409 (504)
T PLN00110        330 MDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEE  409 (504)
T ss_pred             HHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCccc
Confidence            99999877778999999999999999999999999998778999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccc---CccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC
Q 048184          418 FCPERFVGKEIDVVG---HNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK  494 (512)
Q Consensus       418 F~p~R~l~~~~~~~~---~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (512)
                      |+||||++++.....   ....++|||+|+|.|+|++||+.|++++++.|+++|||++.++.   +.+.....+.++.|+
T Consensus       410 F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~  486 (504)
T PLN00110        410 FRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKA  486 (504)
T ss_pred             CCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccC
Confidence            999999965322111   23579999999999999999999999999999999999997663   334334567888899


Q ss_pred             CCceeeeccCCCCCCC
Q 048184          495 NPLLVVPKPRLPLDLY  510 (512)
Q Consensus       495 ~~~~v~~~~R~~~~~~  510 (512)
                      .++++++++|.+-.-|
T Consensus       487 ~~~~~~~~~r~~~~~~  502 (504)
T PLN00110        487 VPLSAMVTPRLHQSAY  502 (504)
T ss_pred             CCceEeeccCCCchhc
Confidence            9999999999543333


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.4e-73  Score=566.16  Aligned_cols=447  Identities=38%  Similarity=0.670  Sum_probs=354.0

Q ss_pred             cCCCCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh
Q 048184           42 KINLLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK  121 (512)
Q Consensus        42 ~~~~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~  121 (512)
                      .++.+.||||+++|++|+++.+....+.++.+|+++||++|++++++.++|+++||+.+++++.++...|..++......
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            33446799999999999998876667789999999999999999999999999999999999998877888876543332


Q ss_pred             hhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHH
Q 048184          122 HANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLA  201 (512)
Q Consensus       122 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~  201 (512)
                      ....++.+++++.+|+.|+++|+.+..++|+...++.+.+. .++++.+++.+...       .++++|+.+++..++++
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~-------~~~~v~~~~~~~~~~~~  183 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN-------IGKPVNIGELIFTLTRN  183 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc-------CCCcEeHHHHHHHHHHH
Confidence            22222234566667999999999955799999999988886 46889999998642       45689999999999999


Q ss_pred             HHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048184          202 IMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHER  281 (512)
Q Consensus       202 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  281 (512)
                      +++.++||.+++...       ..+.+.+..+............+|++.++.+....++..+..+.+.+++.++|+++.+
T Consensus       184 vi~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  256 (516)
T PLN02183        184 ITYRAAFGSSSNEGQ-------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQ  256 (516)
T ss_pred             HHHhHhhcCcccchH-------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999875432       4566666655544333344556777765533334567777888899999998888765


Q ss_pred             hcccccc---cCCCcccHHHHHhcccCCcc---------ccccccHHHHHHHH--------------------HHhcCHH
Q 048184          282 HGKRKLF---KEHGTNDIVDVLLQLADDPT---------LEVKLERDHIKASM--------------------QLLKNPE  329 (512)
Q Consensus       282 ~~~~~~~---~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~--------------------~L~~~p~  329 (512)
                      ..+....   +.....|+++.++++..++.         .+..++++++...+                    +|+.||+
T Consensus       257 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pe  336 (516)
T PLN02183        257 KRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPE  336 (516)
T ss_pred             hhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHH
Confidence            4321100   11134689999998553211         12258888887654                    8999999


Q ss_pred             HHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCC
Q 048184          330 VIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDP  409 (512)
Q Consensus       330 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~  409 (512)
                      +|+|+++|++++++.++.++.+++++||||+|||+||||++|++++.. |.+.+|++++||.|||||.|.++.+++|||+
T Consensus       337 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~  415 (516)
T PLN02183        337 DLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDK  415 (516)
T ss_pred             HHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCc
Confidence            999999999999986667899999999999999999999999999976 9999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCC-cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccC
Q 048184          410 TLWEKPNEFCPERFVGKEID-VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFG  488 (512)
Q Consensus       410 ~~~~~p~~F~p~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  488 (512)
                      ++|+||++|+||||++++.. .......|+|||+|+|.|+|++||+.|+++++|.|+++|++++.++......+....++
T Consensus       416 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~  495 (516)
T PLN02183        416 NSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFG  495 (516)
T ss_pred             cccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccc
Confidence            99999999999999975432 12245689999999999999999999999999999999999998764222334334456


Q ss_pred             cccccCCCceeeeccC
Q 048184          489 GRTSRKNPLLVVPKPR  504 (512)
Q Consensus       489 ~~~~~~~~~~v~~~~R  504 (512)
                      .++.+..++.+.+++|
T Consensus       496 ~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        496 LTAPRATRLVAVPTYR  511 (516)
T ss_pred             cccccCCCcEEEeecC
Confidence            6655666888888888


No 8  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.8e-73  Score=533.46  Aligned_cols=438  Identities=23%  Similarity=0.320  Sum_probs=344.1

Q ss_pred             CCCCCCCCCCCCceeeecccc--CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCC--chh
Q 048184           43 INLLPPPGPKPWHLIVNLNLI--GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRP--PLL  118 (512)
Q Consensus        43 ~~~~~ppgP~~~p~lG~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~--~~~  118 (512)
                      ..++.+|||+++|++||+..+  .+....+..+.+.+||++|.++.+.++.++|+||+.+++|+.++.++|.+|.  ...
T Consensus        28 w~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~  107 (499)
T KOG0158|consen   28 WRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYG  107 (499)
T ss_pred             hccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcC
Confidence            344679999999999999888  3333555555566669999999999999999999999999999999999954  222


Q ss_pred             hhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHH
Q 048184          119 AWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMF  198 (512)
Q Consensus       119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~  198 (512)
                      .... . .....++..+|+.||++|..+ +|.|+...++.+.+.+++.++++++.+.+...     .+..+++.+.+.++
T Consensus       108 d~~~-~-l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~-----~~~~~~~~dl~~~y  179 (499)
T KOG0158|consen  108 DPED-P-LSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSE-----GGQEGEIKDLCARY  179 (499)
T ss_pred             CCCC-c-ccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhc-----ccCCccHHHHHHHH
Confidence            2211 1 122344555699999999999 89999999999999999999999999988644     22689999999999


Q ss_pred             HHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhc-cCCCC----ccccccccccccccchHHHHHHHHHHHHHHHH
Q 048184          199 NLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLL-PGVLD----IGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYE  273 (512)
Q Consensus       199 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~  273 (512)
                      +.|+|++++||.+.+...+    ....+...-...... .....    ....+|.+...  ...........+.+.+.+.
T Consensus       180 T~DVI~~~AfG~~~~s~~d----~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l~~~~~~~~~~~~~~~~v~  253 (499)
T KOG0158|consen  180 TTDVIGSCAFGLDANSLRD----PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--LRVKLFPEDVTDFFRKLVN  253 (499)
T ss_pred             HHHHHhHhhcccchhhhcC----chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--hhcccChHHHHHHHHHHHH
Confidence            9999999999999987552    113444433333322 11111    11222322221  0111223344556666666


Q ss_pred             HHHHHHHHhcccccccCCCcccHHHHHhcccCC--ccc--cccccHHHHHHHH--------------------HHhcCHH
Q 048184          274 HVLHEHERHGKRKLFKEHGTNDIVDVLLQLADD--PTL--EVKLERDHIKASM--------------------QLLKNPE  329 (512)
Q Consensus       274 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~--~~~l~~~~i~~~~--------------------~L~~~p~  329 (512)
                      ..++.|..+       +....|+++.++++..+  .+.  ...++.+++++++                    +|++||+
T Consensus       254 ~~v~~R~~~-------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~Pd  326 (499)
T KOG0158|consen  254 SRVEQREKE-------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPD  326 (499)
T ss_pred             HHHHHHHhc-------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChH
Confidence            666666322       35689999999998864  111  1159999999987                    9999999


Q ss_pred             HHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceec-CcccCCCCEEEEehhhhccC
Q 048184          330 VIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVA-GSNILKNSRVIVNVWAIGRD  408 (512)
Q Consensus       330 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d  408 (512)
                      +|+|||+||++++.+...+|++.+.+|+||++||+||||+||+++.. .|.|.+|++++ |+.||||+.|.++.+++|||
T Consensus       327 vQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~D  405 (499)
T KOG0158|consen  327 VQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHD  405 (499)
T ss_pred             HHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCC
Confidence            99999999999987755599999999999999999999999999995 49999999999 99999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccC
Q 048184          409 PTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFG  488 (512)
Q Consensus       409 ~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  488 (512)
                      |++||||++|+||||.+++.+ .-.+..|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+.+ .+. ......+
T Consensus       406 p~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t-~~~-~~~~~~~  482 (499)
T KOG0158|consen  406 PEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT-IIP-LEGDPKG  482 (499)
T ss_pred             cccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc-cCc-ccCCccc
Confidence            999999999999999987644 4467899999999999999999999999999999999999998832 222 2222337


Q ss_pred             cccccCCCceeeeccCC
Q 048184          489 GRTSRKNPLLVVPKPRL  505 (512)
Q Consensus       489 ~~~~~~~~~~v~~~~R~  505 (512)
                      +++.|++++++++++|+
T Consensus       483 ~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  483 FTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             eeeecCCceEEEEEeCC
Confidence            88999999999999984


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.9e-71  Score=550.86  Aligned_cols=436  Identities=23%  Similarity=0.354  Sum_probs=338.7

Q ss_pred             CCCCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh
Q 048184           43 INLLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH  122 (512)
Q Consensus        43 ~~~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~  122 (512)
                      .+...+|||+++|++||++.+..+++..+.+++++||+||++++|+.++|+++||+.+++++.++...|..++.......
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            33467999999999999998877899999999999999999999999999999999999999987777877765433322


Q ss_pred             hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184          123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI  202 (512)
Q Consensus       123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~  202 (512)
                      ..+ +.+++.. +|+.|+++|+.+ .+.|+...++.+.+.+.+.++.+++.|.....     .++.+|+.+++..+++|+
T Consensus       106 ~~~-~~~l~~~-~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~~~dv  177 (482)
T PTZ00404        106 GTF-YHGIVTS-SGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIES-----SGETFEPRYYLTKFTMSA  177 (482)
T ss_pred             ecc-CCceecc-ChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHh-----cCCccCHHHHHHHHHHHH
Confidence            222 3555544 599999999999 79999999999999999999999999976433     456799999999999999


Q ss_pred             HHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048184          203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERH  282 (512)
Q Consensus       203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  282 (512)
                      ++.++||.+++..++........+...+..++...........++++.... ....+...+..+.+.+++.+.++++++.
T Consensus       178 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~  256 (482)
T PTZ00404        178 MFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKT  256 (482)
T ss_pred             HHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999865321001112445555555544333222222223222111 1112233455667777777777776654


Q ss_pred             cccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHh
Q 048184          283 GKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVI  342 (512)
Q Consensus       283 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      .     +.....|+++.++++..+..   .....++...+                    +|++||++|+|+++||++++
T Consensus       257 ~-----~~~~~~dll~~ll~~~~~~~---~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~  328 (482)
T PTZ00404        257 I-----DPEVPRDLLDLLIKEYGTNT---DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTV  328 (482)
T ss_pred             c-----CCCCcccHHHHHHHHhccCC---cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHh
Confidence            3     12235689999998753211   11111222221                    89999999999999999999


Q ss_pred             cCCccccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee-cCcccCCCCEEEEehhhhccCCCCCCCCCCCCCC
Q 048184          343 GRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV-AGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPE  421 (512)
Q Consensus       343 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  421 (512)
                      +++..++.+++++||||+|||+||||++|+++...+|.+.+|+++ +||.|||||.|.++.+++|+||++||||++|+||
T Consensus       329 ~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~Pe  408 (482)
T PTZ00404        329 NGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPS  408 (482)
T ss_pred             cCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcc
Confidence            876678999999999999999999999999998667999999999 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184          422 RFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP  501 (512)
Q Consensus       422 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  501 (512)
                      ||++..     .+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++.   +++.....+.++.| .+++|.+
T Consensus       409 Rwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~-~~~~v~~  479 (482)
T PTZ00404        409 RFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLKP-NKFKVLL  479 (482)
T ss_pred             ccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeecC-CCceeee
Confidence            998642     45689999999999999999999999999999999999987653   33333345666775 5899999


Q ss_pred             ccC
Q 048184          502 KPR  504 (512)
Q Consensus       502 ~~R  504 (512)
                      ++|
T Consensus       480 ~~R  482 (482)
T PTZ00404        480 EKR  482 (482)
T ss_pred             ecC
Confidence            987


No 10 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=5.7e-71  Score=548.83  Aligned_cols=446  Identities=36%  Similarity=0.622  Sum_probs=345.5

Q ss_pred             CCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184           46 LPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN  124 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~  124 (512)
                      +.||||+++|++||++.+ ..+++..+.+|+++||++|+++++++++|+++||+.+++++.++...|.+++.........
T Consensus        29 ~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~  108 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFIS  108 (502)
T ss_pred             CCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeec
Confidence            569999999999999988 5578999999999999999999999999999999999999998777787665433222222


Q ss_pred             cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHH
Q 048184          125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMS  204 (512)
Q Consensus       125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  204 (512)
                      .+...+.+..+|+.|+++|+.+..++|++.+++.+.+.+.++++++++.|.....     .++.+|+.+++..+++|+++
T Consensus       109 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-----~~~~vdl~~~~~~~t~dvi~  183 (502)
T PLN02966        109 YGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD-----KSEVVDISELMLTFTNSVVC  183 (502)
T ss_pred             cCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCceeHHHHHHHHHHHHHH
Confidence            2223344455699999999995489999999999999999999999999976543     45689999999999999999


Q ss_pred             HHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 048184          205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLD-LQGNIKRMKAVKKKIDKFYEHVLHEHERHG  283 (512)
Q Consensus       205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  283 (512)
                      .++||.+++..++    ....+...+...........+..++|++.++. ..+..+......+...+++.+.++++....
T Consensus       184 ~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        184 RQAFGKKYNEDGE----EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHHhCCccCccch----HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999865431    22444454444443333333334456443321 112223334456667777777777665432


Q ss_pred             ccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhc
Q 048184          284 KRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIG  343 (512)
Q Consensus       284 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~  343 (512)
                      ..    .....|+++.+++..+++..+..++++++..++                    +|++||++|+|+++||+++++
T Consensus       260 ~~----~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  335 (502)
T PLN02966        260 RV----KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMK  335 (502)
T ss_pred             cc----ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence            11    123468999999766543223358888887654                    899999999999999999997


Q ss_pred             CC--ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCC-CCCCCCCC
Q 048184          344 RN--KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLW-EKPNEFCP  420 (512)
Q Consensus       344 ~~--~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p  420 (512)
                      .+  ..++++++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++| |||++|+|
T Consensus       336 ~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~P  415 (502)
T PLN02966        336 EKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRP  415 (502)
T ss_pred             ccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCCh
Confidence            52  3579999999999999999999999999997779999999999999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceee
Q 048184          421 ERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVV  500 (512)
Q Consensus       421 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  500 (512)
                      |||++++.+....+..|+|||+|+|.|+|++||++|+++++|.||++|+|++.++...+..+++...|++..++..++++
T Consensus       416 eRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (502)
T PLN02966        416 ERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV  495 (502)
T ss_pred             hhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEE
Confidence            99997543222345689999999999999999999999999999999999998775444444445556666555566655


Q ss_pred             eccC
Q 048184          501 PKPR  504 (512)
Q Consensus       501 ~~~R  504 (512)
                      .++-
T Consensus       496 ~~~~  499 (502)
T PLN02966        496 PEKV  499 (502)
T ss_pred             EEeC
Confidence            5543


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.8e-70  Score=546.97  Aligned_cols=447  Identities=26%  Similarity=0.415  Sum_probs=348.3

Q ss_pred             CCCCCCCCCCceeeeccccC---CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh
Q 048184           45 LLPPPGPKPWHLIVNLNLIG---QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK  121 (512)
Q Consensus        45 ~~~ppgP~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~  121 (512)
                      .+.||||+++|++||++.+.   .+++..+.+|+++||++|++++|+.++|+++||+.+++++.++...|..++......
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~  113 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSR  113 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchh
Confidence            36799999999999987652   357889999999999999999999999999999999999998888888887643322


Q ss_pred             hhccCCccccc-CCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184          122 HANYNYLVMPG-APYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL  200 (512)
Q Consensus       122 ~~~~~~~~~~~-~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~  200 (512)
                      .... +.+++. ..+|+.|+++||.+.+++|+.+.++.+.+.+.++++.+++.|.....     .+..+|+.+.+..++.
T Consensus       114 ~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~-----~~~~v~~~~~~~~~~~  187 (519)
T PLN00168        114 LLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE-----DAAAPRVVETFQYAMF  187 (519)
T ss_pred             hhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCcCHHHHHHHHHH
Confidence            2221 122333 35699999999855589999999999999999999999999976433     3456899999999999


Q ss_pred             HHHHHHHhccccCcccccCCCChhHHHHHHHHHHh-ccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184          201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFL-LPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH  279 (512)
Q Consensus       201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  279 (512)
                      ++++.++||.+++...      ...+......+.. ......+...+|++.+.......++..+..+.+.+++..+++++
T Consensus       188 ~ii~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (519)
T PLN00168        188 CLLVLMCFGERLDEPA------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDAR  261 (519)
T ss_pred             HHHHHHHcCCCcChhh------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999885321      1334344443321 11223334556754332122224556677889999999999987


Q ss_pred             HHhcccc---c-cc---CCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHH
Q 048184          280 ERHGKRK---L-FK---EHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQ  332 (512)
Q Consensus       280 ~~~~~~~---~-~~---~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~  332 (512)
                      ++..+..   . ..   +....|+++.|++....+..+..++++++..++                    +|+.||++|+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~  341 (519)
T PLN00168        262 REYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQS  341 (519)
T ss_pred             HHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHH
Confidence            7643110   0 00   012468999999765322223368999888765                    9999999999


Q ss_pred             HHHHHHHHHhcC-CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCC
Q 048184          333 KATDELDRVIGR-NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTL  411 (512)
Q Consensus       333 ~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      |+++||+++++. .+.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++
T Consensus       342 kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~  421 (519)
T PLN00168        342 KLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDERE  421 (519)
T ss_pred             HHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccc
Confidence            999999999975 3568999999999999999999999999998878999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCC-----cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccc
Q 048184          412 WEKPNEFCPERFVGKEID-----VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEER  486 (512)
Q Consensus       412 ~~~p~~F~p~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  486 (512)
                      ||||++|+||||++++..     ....+..|+|||.|+|.|+|++||++|++++++.||++|||++.++.   +.+....
T Consensus       422 ~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~  498 (519)
T PLN00168        422 WERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEK  498 (519)
T ss_pred             cCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhh
Confidence            999999999999974321     11234689999999999999999999999999999999999997653   2333333


Q ss_pred             cCcccccCCCceeeeccCCC
Q 048184          487 FGGRTSRKNPLLVVPKPRLP  506 (512)
Q Consensus       487 ~~~~~~~~~~~~v~~~~R~~  506 (512)
                      .++++.+++++.|++++|+.
T Consensus       499 ~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        499 REFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             ceeEEeecCCcEEEEEeccC
Confidence            45667778899999999963


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.9e-70  Score=544.48  Aligned_cols=446  Identities=32%  Similarity=0.520  Sum_probs=337.5

Q ss_pred             CCCCCCCCCceeeeccccCCC-ccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184           46 LPPPGPKPWHLIVNLNLIGQN-LHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN  124 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~  124 (512)
                      +.||||+++|++|+++.+..+ .+..+.+|+++||+||++++|++++|+|+||+.+++++.++...|.+++.........
T Consensus        30 ~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~  109 (503)
T PLN02394         30 KLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFT  109 (503)
T ss_pred             CCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhc
Confidence            569999999999999888544 5789999999999999999999999999999999999988777787775433333332


Q ss_pred             cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHH
Q 048184          125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMS  204 (512)
Q Consensus       125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  204 (512)
                      ..+.+++++.+|+.|+++||.+..+.|+++.++.+.+.++++++++++.|......    .++.+++.+++..+++|+++
T Consensus       110 g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~----~~~~v~~~~~~~~~~~dvi~  185 (503)
T PLN02394        110 GKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA----ATEGVVIRRRLQLMMYNIMY  185 (503)
T ss_pred             cCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc----cCCcEecHHHHHHHHHHHHH
Confidence            22345566667999999999984599999999999999999999999999764321    23469999999999999999


Q ss_pred             HHHhccccCcccccCCCChhHHHHHHHHHHhccCC--CCccccccccccccccchHHHHHHHHHHHHH-HHHHHHHHHHH
Q 048184          205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGV--LDIGDAIPWLAFLDLQGNIKRMKAVKKKIDK-FYEHVLHEHER  281 (512)
Q Consensus       205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~~~~  281 (512)
                      .++||.+++..++   .....+.............  ..+..++|++.... ....+...+....... +...+++++++
T Consensus       186 ~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        186 RMMFDRRFESEDD---PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHhCCCcccccc---hhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999865331   1223333333322222111  12223445443211 1111222222222233 33445666654


Q ss_pred             hcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHH
Q 048184          282 HGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRV  341 (512)
Q Consensus       282 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~  341 (512)
                      ..+....+.....|+++.|+++..++    .++++++..++                    +|++||++|+||++||+++
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v  337 (503)
T PLN02394        262 LMSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTV  337 (503)
T ss_pred             HhhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            32111001123578999999876533    57787876543                    9999999999999999999


Q ss_pred             hcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCC
Q 048184          342 IGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPE  421 (512)
Q Consensus       342 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  421 (512)
                      ++.++.++.+++++||||+|||+||||++|++++..+|.+.+|++++||.|||||.|.++.+++|+|+++|+||++|+||
T Consensus       338 ~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~Pe  417 (503)
T PLN02394        338 LGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPE  417 (503)
T ss_pred             hCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCcc
Confidence            98766789999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC--cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccC-cccccCCCce
Q 048184          422 RFVGKEID--VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFG-GRTSRKNPLL  498 (512)
Q Consensus       422 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  498 (512)
                      ||++++.+  .......|+|||+|+|.|+|++||++|+++++|.|+++|+|++.++.  +..+....+| +....+.+++
T Consensus       418 Rwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        418 RFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ--SKIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             ccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC--CcCccccccCceeeccCCCce
Confidence            99975432  12235689999999999999999999999999999999999987764  2244444443 5664556999


Q ss_pred             eeeccCC
Q 048184          499 VVPKPRL  505 (512)
Q Consensus       499 v~~~~R~  505 (512)
                      |+++||.
T Consensus       496 ~~~~~r~  502 (503)
T PLN02394        496 VVFKPRS  502 (503)
T ss_pred             EEeecCC
Confidence            9999995


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=9.4e-70  Score=535.02  Aligned_cols=440  Identities=23%  Similarity=0.386  Sum_probs=349.6

Q ss_pred             CCCCCCCceeeeccccC-CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccC
Q 048184           48 PPGPKPWHLIVNLNLIG-QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYN  126 (512)
Q Consensus        48 ppgP~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  126 (512)
                      ||||+++|++||++++. .+++.++.+|+++||+||++++|++++|+|+||+.+++++.++...|..++..........+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999999984 56899999999999999999999999999999999999999888888888654443323222


Q ss_pred             CcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHH
Q 048184          127 YLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRM  206 (512)
Q Consensus       127 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~  206 (512)
                      +..+...++|+.|+++||.+..++|+...++.+.+.+.+.++.+++.+.+...+.   .++.+|+.++++.+++++++.+
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~vd~~~~~~~~t~dvi~~~  157 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD---PHSPVNFRDVFENELFGLSLIQ  157 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc---CCCceeHHHHHHHHHHHHHHHH
Confidence            2234445569999999998867889988888899999999999999887554321   3567999999999999999999


Q ss_pred             HhccccCccccc-CCCC---hhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048184          207 LFGKRYTEEDEN-NIVT---PKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERH  282 (512)
Q Consensus       207 ~fG~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  282 (512)
                      +||.+++..... ....   ...+...+..+........+...+|++++++.....+...+....+.+++..+++++++.
T Consensus       158 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (466)
T PLN02655        158 ALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKR  237 (466)
T ss_pred             HhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999988653211 1111   122334444444444333344567876666433333444444555678888888887765


Q ss_pred             cccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHh
Q 048184          283 GKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVI  342 (512)
Q Consensus       283 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      ...    +....|+++.+++...      .++++++...+                    +|+.||++|+|+++||++++
T Consensus       238 ~~~----~~~~~d~l~~ll~~~~------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~  307 (466)
T PLN02655        238 IAR----GEERDCYLDFLLSEAT------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC  307 (466)
T ss_pred             hcC----CCCcccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            322    1234689999997642      47777776654                    89999999999999999999


Q ss_pred             cCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 048184          343 GRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPER  422 (512)
Q Consensus       343 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  422 (512)
                      +.+. ++.++++++|||+||++||||++|+++...+|.+.+|++++||.|||||.|+++.+++|||+++|+||++|+|||
T Consensus       308 ~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR  386 (466)
T PLN02655        308 GDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPER  386 (466)
T ss_pred             CCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccc
Confidence            8755 899999999999999999999999999987899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeec
Q 048184          423 FVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPK  502 (512)
Q Consensus       423 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  502 (512)
                      |++++.. ......++|||+|+|.|||++||..|++++++.||++|+|++.++.   . +.....++++.+++++.|.++
T Consensus       387 ~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~  461 (466)
T PLN02655        387 FLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD---E-EKEDTVQLTTQKLHPLHAHLK  461 (466)
T ss_pred             cCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC---c-cccchhheeEeecCCcEEEEe
Confidence            9975432 1234789999999999999999999999999999999999997663   1 122345777889999999999


Q ss_pred             cCCC
Q 048184          503 PRLP  506 (512)
Q Consensus       503 ~R~~  506 (512)
                      +|..
T Consensus       462 ~r~~  465 (466)
T PLN02655        462 PRGS  465 (466)
T ss_pred             ecCC
Confidence            9864


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.5e-69  Score=541.61  Aligned_cols=434  Identities=23%  Similarity=0.312  Sum_probs=336.0

Q ss_pred             CCCCCCCCCceeeeccccC-------------------CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHh
Q 048184           46 LPPPGPKPWHLIVNLNLIG-------------------QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKT  106 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~-------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~  106 (512)
                      +.||||+++|++||++++.                   .+....+.+|+++||++|++++|+.++|+++||+.+++++.+
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~  121 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTK  121 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhc
Confidence            5699999999999987762                   223346788999999999999999999999999999999987


Q ss_pred             cccccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 048184          107 YDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSS  186 (512)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  186 (512)
                      + ..+..++...........+.+++++ +|+.|+++||.+ .+.|+..+++.+.+.+.++++++++.|......    ++
T Consensus       122 ~-~~~~~r~~~~~~~~~~~~g~~l~~~-~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~----~~  194 (516)
T PLN02290        122 Y-NTVTGKSWLQQQGTKHFIGRGLLMA-NGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVES----GQ  194 (516)
T ss_pred             C-CCCCCCcchhhhHHHHHhcCCcccc-CchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence            6 3455554321111111123455554 599999999999 799999999999999999999999999765331    23


Q ss_pred             CceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHH
Q 048184          187 TPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKK  266 (512)
Q Consensus       187 ~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~  266 (512)
                      +.+|+.+++..+++++++.++||.+++..        +++...++.+............+|++.+++ .+..++..+..+
T Consensus       195 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~  265 (516)
T PLN02290        195 TEVEIGEYMTRLTADIISRTEFDSSYEKG--------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKG  265 (516)
T ss_pred             ceEEhHHHHHHHHHHHHHHHHcCCccccc--------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHH
Confidence            57999999999999999999999987532        222223222221111111112345544442 233455667778


Q ss_pred             HHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCc-cccccccHHHHHHHH--------------------HHh
Q 048184          267 KIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDP-TLEVKLERDHIKASM--------------------QLL  325 (512)
Q Consensus       267 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~--------------------~L~  325 (512)
                      .+.+++.+.|+++++..+... +.....|+++.++++..+. ..+..++++++...+                    +|+
T Consensus       266 ~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~  344 (516)
T PLN02290        266 EVERLLMEIIQSRRDCVEIGR-SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLA  344 (516)
T ss_pred             HHHHHHHHHHHHHHHHhhccc-CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence            899999999998876542110 1123579999999765422 112246777766543                    999


Q ss_pred             cCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhh
Q 048184          326 KNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAI  405 (512)
Q Consensus       326 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~  405 (512)
                      +||++|+|+++||+++++.+ .++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|.++.+++
T Consensus       345 ~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~  422 (516)
T PLN02290        345 SNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAI  422 (516)
T ss_pred             cCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHh
Confidence            99999999999999999875 68999999999999999999999999997 57999999999999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcc
Q 048184          406 GRDPTLW-EKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDME  484 (512)
Q Consensus       406 ~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  484 (512)
                      |+||++| +||++|+||||++++   ......|+|||.|+|.|+|++||++|++++++.|+++|||++.++.   .  ..
T Consensus       423 ~rdp~~~~~dP~~F~PeRfl~~~---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~---~--~~  494 (516)
T PLN02290        423 HHSEELWGKDANEFNPDRFAGRP---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY---R--HA  494 (516)
T ss_pred             cCChhhhCCChhhcCccccCCCC---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc---c--cC
Confidence            9999999 899999999999542   1234579999999999999999999999999999999999997663   1  11


Q ss_pred             cccCcccccCCCceeeeccCCC
Q 048184          485 ERFGGRTSRKNPLLVVPKPRLP  506 (512)
Q Consensus       485 ~~~~~~~~~~~~~~v~~~~R~~  506 (512)
                      ...+.++.|+++++|++++|+|
T Consensus       495 ~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        495 PVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             ccceeeecCCCCCeEEEEeCCC
Confidence            2335788999999999999986


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.2e-67  Score=523.70  Aligned_cols=449  Identities=28%  Similarity=0.462  Sum_probs=334.6

Q ss_pred             CCCCCCCCCceeeecccc-CCCcc-HHHHHHHhhc-CCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh
Q 048184           46 LPPPGPKPWHLIVNLNLI-GQNLH-VSLQSLSQKY-GPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH  122 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~-~~~~~-~~~~~~~~ky-G~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~  122 (512)
                      +.||||+++|++||++++ ..+++ .++..+.++| |+||++++|++++|+|+||+.+++++.+++..|..|+.......
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~  119 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET  119 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence            469999999999999987 33332 4566677776 79999999999999999999999999988888998876544433


Q ss_pred             hccCCcccccCCCChhHHHHHHHHHhhcC-ChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHH
Q 048184          123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLL-SPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLA  201 (512)
Q Consensus       123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~  201 (512)
                      ...++.++.+..+|+.|+++|+.+ ++.| +......+.+....+++++++.+.+..+     .+.++|+.+++..++++
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ-----RSETVDVRELSRVYGYA  193 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCceeHHHHHHHHHHH
Confidence            322233566666799999999999 5765 4444444556666778999999976433     34579999999999999


Q ss_pred             HHHHHHhccccCccccc---CCCChhHHHHHHHHHHh---ccCCCCcccccc-ccccccccchHHHHHHHHHHHHHHHHH
Q 048184          202 IMSRMLFGKRYTEEDEN---NIVTPKQFTEIVDELFL---LPGVLDIGDAIP-WLAFLDLQGNIKRMKAVKKKIDKFYEH  274 (512)
Q Consensus       202 ~~~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~  274 (512)
                      +++.++||.+++..+..   .......+.........   ..........+| |+.++......++.......+.+++.+
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  273 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNP  273 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Confidence            99999999998542110   01111222222222221   111111223344 444322222334555566778888999


Q ss_pred             HHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHH
Q 048184          275 VLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKA  334 (512)
Q Consensus       275 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l  334 (512)
                      +++++++...... +.....|+++.+++...+++ ...++++++...+                    +|+.||++|+|+
T Consensus       274 ~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        274 IIDERVELWREKG-GKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHHHHhhhcc-CCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            9988875431110 11124689999997654331 1137888887655                    999999999999


Q ss_pred             HHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184          335 TDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK  414 (512)
Q Consensus       335 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  414 (512)
                      ++||+++++.++.++.+++.+||||+|||+||||++|+++...+|++.+|++++||.|||||.|+++.+++|+||++|+|
T Consensus       352 ~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~  431 (534)
T PLN03018        352 LKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKD  431 (534)
T ss_pred             HHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCC
Confidence            99999999877778999999999999999999999999998877999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCc-----ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCc
Q 048184          415 PNEFCPERFVGKEIDV-----VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGG  489 (512)
Q Consensus       415 p~~F~p~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  489 (512)
                      |++|+||||+++++..     ...+..|+|||+|+|.|+|++||..|++++++.|+++|+|++.++.  .+++.....+.
T Consensus       432 p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~  509 (534)
T PLN03018        432 PLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDAS  509 (534)
T ss_pred             ccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccc
Confidence            9999999999754321     1245689999999999999999999999999999999999987652  12333233354


Q ss_pred             ccccCCCceeeeccCC
Q 048184          490 RTSRKNPLLVVPKPRL  505 (512)
Q Consensus       490 ~~~~~~~~~v~~~~R~  505 (512)
                      +.. +.+++|.+++|.
T Consensus       510 ~~~-p~~~~v~~~~R~  524 (534)
T PLN03018        510 LLM-AKPLLLSVEPRL  524 (534)
T ss_pred             eec-CCCeEEEEEecc
Confidence            444 469999999994


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=5.9e-68  Score=520.56  Aligned_cols=435  Identities=27%  Similarity=0.422  Sum_probs=343.2

Q ss_pred             CCCCCCCCCCCceeeeccccC---CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184           44 NLLPPPGPKPWHLIVNLNLIG---QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW  120 (512)
Q Consensus        44 ~~~~ppgP~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~  120 (512)
                      ....||||+++|++|+++++.   .+...++.++..+||++|+.|+||.++++++||+.+++|+.++...+.+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            345699999999999999883   35778889999999999999999999999999999999997655556655555533


Q ss_pred             hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184          121 KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL  200 (512)
Q Consensus       121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~  200 (512)
                      ..... |.|+++++ |+.|+++||++ .+.|+...++.+...+.+.+..+...+.....      +..+|+.+.++++++
T Consensus       113 ~~~~l-G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~------~~~vd~~~~~~~~tl  183 (497)
T KOG0157|consen  113 LKPWL-GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAAS------GEEVDLQDLLKRLTL  183 (497)
T ss_pred             HHHHh-cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCeEcHHHHHHHHHH
Confidence            22222 45888888 99999999998 79999999999999999999998888776422      222999999999999


Q ss_pred             HHHHHHHhcccc-CcccccCCCChhHHHHHHHHHHhccCCCCcccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 048184          201 AIMSRMLFGKRY-TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIP-WLAFLDLQGNIKRMKAVKKKIDKFYEHVLHE  278 (512)
Q Consensus       201 ~~~~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  278 (512)
                      |++++++||... +.+.    ....++.++++.......   .....| +..++...+..++..++.+.+.++++++|++
T Consensus       184 d~i~~~~~G~~~~~~~~----~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~  256 (497)
T KOG0157|consen  184 DIICKTAMGPESLDAEG----PELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRE  256 (497)
T ss_pred             HHHHHHhcCCccccccC----CcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999322 2122    122344444443322211   122345 4444333335688899999999999999999


Q ss_pred             HHHhccccccc-CCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHH
Q 048184          279 HERHGKRKLFK-EHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDE  337 (512)
Q Consensus       279 ~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~E  337 (512)
                      ++++.+....+ .....|+++.+....+     ..++++++...+                    .|+.||++|+|+++|
T Consensus       257 rr~~~~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eE  331 (497)
T KOG0157|consen  257 RREELEKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREE  331 (497)
T ss_pred             HHHHHHhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            99775332111 1346778885333222     267788777766                    999999999999999


Q ss_pred             HHHHhcCCcc-ccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee-cCcccCCCCEEEEehhhhccCCCCCC-C
Q 048184          338 LDRVIGRNKW-VEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV-AGSNILKNSRVIVNVWAIGRDPTLWE-K  414 (512)
Q Consensus       338 i~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~-~  414 (512)
                      ++++++.+.. ++....++|+||++||+||||++|++|+.. |.+.+|+++ +||.||||+.|.++++++|||+++|+ |
T Consensus       332 i~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~d  410 (497)
T KOG0157|consen  332 VDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGED  410 (497)
T ss_pred             HHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCC
Confidence            9999985432 233333369999999999999999999987 999999999 58999999999999999999999995 9


Q ss_pred             CCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC
Q 048184          415 PNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK  494 (512)
Q Consensus       415 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (512)
                      |++||||||++++.....++++|+|||+|+|.|+|++||++|+|++++.|+++|+|+++.+.   .  .......+++|+
T Consensus       411 p~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~---~--~~~~~~~~l~~~  485 (497)
T KOG0157|consen  411 PEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD---K--PKPVPELTLRPK  485 (497)
T ss_pred             hhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC---C--ceeeeEEEEEec
Confidence            99999999997644334457899999999999999999999999999999999999998774   1  334668999999


Q ss_pred             CCceeeeccCC
Q 048184          495 NPLLVVPKPRL  505 (512)
Q Consensus       495 ~~~~v~~~~R~  505 (512)
                      ++++|++++|.
T Consensus       486 ~gl~v~~~~r~  496 (497)
T KOG0157|consen  486 NGLKVKLRPRG  496 (497)
T ss_pred             CCeEEEEEeCC
Confidence            99999999996


No 17 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.5e-67  Score=517.45  Aligned_cols=411  Identities=19%  Similarity=0.266  Sum_probs=322.4

Q ss_pred             CCCCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh
Q 048184           43 INLLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH  122 (512)
Q Consensus        43 ~~~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~  122 (512)
                      .+++.||||+++|++||++.+..+++.++++++++||++|+++++++++++|+||+.+++++.++...|..+...... .
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~-~  106 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML-D  106 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH-H
Confidence            444678999999999999888666778999999999999999999999999999999999998776666443322221 1


Q ss_pred             hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHH-hHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHH
Q 048184          123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQ-FEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLA  201 (512)
Q Consensus       123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~  201 (512)
                      . +++.+++. .+|+.|+++|+.+ .+.|++..++. +.+.+.+.+++++++|.         .++++|+.+.+..++++
T Consensus       107 ~-lg~~~~~~-~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~  174 (463)
T PLN02774        107 I-LGTCNIAA-VHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD---------GLKTIDIQEKTKEMALL  174 (463)
T ss_pred             H-hCccchhh-cCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC---------CCCCEEeeHHHHHHHHH
Confidence            1 22234444 4699999999999 69999999886 78888888888887763         23569999999999999


Q ss_pred             HHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048184          202 IMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHER  281 (512)
Q Consensus       202 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  281 (512)
                      +++.++||.+.....       ..+...+..+...  ..    .+|.  ++ +....++..++.+.+.+++.+.++++++
T Consensus       175 ~~~~~~~g~~~~~~~-------~~~~~~~~~~~~~--~~----~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~  238 (463)
T PLN02774        175 SALKQIAGTLSKPIS-------EEFKTEFFKLVLG--TL----SLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRA  238 (463)
T ss_pred             HHHHHHcCCCChHHH-------HHHHHHHHHHhcc--cc----cCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998653321       2333333332211  11    1121  11 1112355667788899999999988875


Q ss_pred             hcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHH
Q 048184          282 HGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRV  341 (512)
Q Consensus       282 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~  341 (512)
                      ..       ....|+++.+++...+   +..++++++..++                    +|+.||++|+|+++|++++
T Consensus       239 ~~-------~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~  308 (463)
T PLN02774        239 SG-------ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAI  308 (463)
T ss_pred             cC-------CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            43       2347999999974332   2257888887765                    8999999999999999999


Q ss_pred             hcC---CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCC
Q 048184          342 IGR---NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEF  418 (512)
Q Consensus       342 ~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  418 (512)
                      ++.   +..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|
T Consensus       309 ~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F  387 (463)
T PLN02774        309 RERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTF  387 (463)
T ss_pred             HhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhcc
Confidence            864   34678999999999999999999999999875 49999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCce
Q 048184          419 CPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLL  498 (512)
Q Consensus       419 ~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (512)
                      +||||++++..   ....|+|||+|+|.|||++||+.|++++++.|+++|+|++.++.   ++.  ..  .++.|+++++
T Consensus       388 ~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~---~~~--~~--~~~~p~~g~~  457 (463)
T PLN02774        388 NPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD---KLM--KF--PRVEAPNGLH  457 (463)
T ss_pred             CchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC---ccc--cC--CCCCCCCCce
Confidence            99999965421   12369999999999999999999999999999999999997663   111  11  2345788999


Q ss_pred             eeecc
Q 048184          499 VVPKP  503 (512)
Q Consensus       499 v~~~~  503 (512)
                      |++++
T Consensus       458 ~~~~~  462 (463)
T PLN02774        458 IRVSP  462 (463)
T ss_pred             EEeee
Confidence            99884


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.9e-67  Score=522.48  Aligned_cols=415  Identities=18%  Similarity=0.236  Sum_probs=317.7

Q ss_pred             CCCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhh
Q 048184           45 LLPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLA  119 (512)
Q Consensus        45 ~~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~  119 (512)
                      .+.||||+++|++||++.+     .+.++.++.+++++||++|++++|++++|+++||+.+++++.+++..|..+.....
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~  116 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSI  116 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHH
Confidence            3679999999999997654     14567889999999999999999999999999999999999987776754432211


Q ss_pred             hhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHH-hHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHH
Q 048184          120 WKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQ-FEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMF  198 (512)
Q Consensus       120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~  198 (512)
                      . .. .++.++++. +|+.|+++|+.+ .+.|+...++. +.+.+.+.+..+++.|.         .+..+|+.+.++.+
T Consensus       117 ~-~~-~g~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~vd~~~~~~~~  183 (490)
T PLN02500        117 G-GI-LGKWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK---------ENSTFSAQDEAKKF  183 (490)
T ss_pred             H-HH-hCccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC---------CCCCEEehHHHHHH
Confidence            1 11 222345555 599999999999 69999999887 56777777777777663         33469999999999


Q ss_pred             HHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 048184          199 NLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHE  278 (512)
Q Consensus       199 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  278 (512)
                      +++++++++||.+.+..+      ...+...+..+......  ....+|..       ..++..+..+.+.+++.+++++
T Consensus       184 ~~~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~  248 (490)
T PLN02500        184 TFNLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEE  248 (490)
T ss_pred             HHHHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998764321      13333333333221111  11112321       1245566778899999999988


Q ss_pred             HHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHH
Q 048184          279 HERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDEL  338 (512)
Q Consensus       279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei  338 (512)
                      +++...... ......|+++.+++..       .++++++..++                    +|+.||++|+|+++|+
T Consensus       249 ~~~~~~~~~-~~~~~~d~l~~ll~~~-------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei  320 (490)
T PLN02500        249 RIEKLKEED-ESVEEDDLLGWVLKHS-------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEH  320 (490)
T ss_pred             HHHhhhccc-CCCCcchHHHHHHhcc-------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence            876432110 1123468999998742       46777776654                    9999999999999999


Q ss_pred             HHHhc-----CCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCC
Q 048184          339 DRVIG-----RNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWE  413 (512)
Q Consensus       339 ~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~  413 (512)
                      +++++     .++.++.+|+++|||++|||+||||++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+
T Consensus       321 ~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~  399 (490)
T PLN02500        321 LEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYD  399 (490)
T ss_pred             HHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCC
Confidence            99874     234589999999999999999999999999986 599999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcc------cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCccccc
Q 048184          414 KPNEFCPERFVGKEIDVV------GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERF  487 (512)
Q Consensus       414 ~p~~F~p~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  487 (512)
                      ||++|+||||++++....      ..+..|+|||+|+|.|+|++||+.|++++++.|+++|+|++.++.   . ...  .
T Consensus       400 dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~---~-~~~--~  473 (490)
T PLN02500        400 QPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD---Q-AFA--F  473 (490)
T ss_pred             CccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC---c-cee--c
Confidence            999999999997543211      245689999999999999999999999999999999999997663   1 111  1


Q ss_pred             CcccccCCCceeeecc
Q 048184          488 GGRTSRKNPLLVVPKP  503 (512)
Q Consensus       488 ~~~~~~~~~~~v~~~~  503 (512)
                      ..+ .++.++.|++++
T Consensus       474 ~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        474 PFV-DFPKGLPIRVRR  488 (490)
T ss_pred             ccc-cCCCCceEEEEe
Confidence            222 444699998875


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.5e-67  Score=483.21  Aligned_cols=439  Identities=22%  Similarity=0.352  Sum_probs=361.6

Q ss_pred             CCCCCCCCCceeeecccc----CCCccHHHHHHHhhcCCceEEe-cCCEeEEEcCCHHHHHHHHHhcccccCCCC-chhh
Q 048184           46 LPPPGPKPWHLIVNLNLI----GQNLHVSLQSLSQKYGPLMQLK-FGLETVVVGSSAEVAELLLKTYDVTFASRP-PLLA  119 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~-~~~~  119 (512)
                      ..+|||+++|++|.++..    ..+.|+.....+++|||||+.. +|+...|++.||++++.+|++++ .++.|+ ....
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccch
Confidence            458999999999988733    4688999999999999999999 89999999999999999999765 457775 3333


Q ss_pred             hhh--hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHH
Q 048184          120 WKH--ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFM  197 (512)
Q Consensus       120 ~~~--~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~  197 (512)
                      +..  -.+++...++..+|++|.+.|..+...++++++++.|.+.++..+++++..+....+.  +....+.|+.+.+.+
T Consensus       129 w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~--~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  129 WVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP--ERGELVPDFAQELYR  206 (519)
T ss_pred             hhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc--cccccchhHHHHHHH
Confidence            321  1233333445555999999999998888999999999999999999999999877552  125567899999999


Q ss_pred             HHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccc-ccccccccchHHHHHHHHHHHHHHHHHHH
Q 048184          198 FNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIP-WLAFLDLQGNIKRMKAVKKKIDKFYEHVL  276 (512)
Q Consensus       198 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  276 (512)
                      ++++.++.++||.+++...++.+.+.+.+..++..++.....+.   +.| +++++ +.+.++++.++.+.+.++....|
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhC-CChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999877777788899999998887654432   334 45554 45667999999999999999999


Q ss_pred             HHHHHhccccccc-CCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184          277 HEHERHGKRKLFK-EHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKAT  335 (512)
Q Consensus       277 ~~~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~  335 (512)
                      ++..++.+..+.. .+....++..|..+        +++..++..++                    +|++||++|++|+
T Consensus       283 d~~l~~l~~~~~~~~~~~~~l~~~L~~~--------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  283 DNALEELEKQDSAGSEYTGSLLELLLRK--------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHHhccccccchhHHHHHHHHHc--------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            9987776433111 12223344444443        23333333322                    9999999999999


Q ss_pred             HHHHHHhcC-CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184          336 DELDRVIGR-NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK  414 (512)
Q Consensus       336 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  414 (512)
                      +|+..+.+. +..++.+++.++|||.||||||+||+|++++.. |+..+|.+++||.|||||.|.++.+.+.+||++|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999987 678999999999999999999999999999987 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC
Q 048184          415 PNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK  494 (512)
Q Consensus       415 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (512)
                      |++|+|||||+++. ...+++.++|||.|+|+|+||.+|.+|+-+++|+++++||++..+..   ++.  ..+.+++.|.
T Consensus       434 p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~---pv~--~~~~~il~P~  507 (519)
T KOG0159|consen  434 PEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE---PVE--YVYRFILVPN  507 (519)
T ss_pred             ccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC---Ccc--ceeEEEEcCC
Confidence            99999999998763 34588999999999999999999999999999999999999998753   333  4567889999


Q ss_pred             CCceeeeccCCC
Q 048184          495 NPLLVVPKPRLP  506 (512)
Q Consensus       495 ~~~~v~~~~R~~  506 (512)
                      .++..+|++|++
T Consensus       508 ~~l~f~f~~r~~  519 (519)
T KOG0159|consen  508 RPLRFKFRPRNE  519 (519)
T ss_pred             CCcceeeeeCCC
Confidence            999999999964


No 20 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=7.8e-67  Score=513.36  Aligned_cols=435  Identities=19%  Similarity=0.261  Sum_probs=340.1

Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEE
Q 048184           15 NSTRSYSILAFFLPVLLLLYYRHIFRNKI-NLLPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVV   92 (512)
Q Consensus        15 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v   92 (512)
                      +|.+...+++.++.++++.+|.++.+... +.+.||||+++|++||++++ ..+++.++.+++++||++|+++++++++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v   82 (463)
T PLN02196          3 FSALFLTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCV   82 (463)
T ss_pred             hHhhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceE
Confidence            45555666666666666666666554433 33678999999999998876 67899999999999999999999999999


Q ss_pred             EcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHH
Q 048184           93 VGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLF  172 (512)
Q Consensus        93 vi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~  172 (512)
                      +++||+.+++++.++...|.  +..........+..++++ .+|+.|+++||.+ .+.|+++.++.+.+.+.++++++++
T Consensus        83 ~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~~~g~~~l~~-~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~  158 (463)
T PLN02196         83 MISSPEAAKFVLVTKSHLFK--PTFPASKERMLGKQAIFF-HQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLN  158 (463)
T ss_pred             EEcCHHHHHHHHhCCCCccc--ccCchHHHHHcCcccccc-cCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987766563  222212122223234444 4599999999999 6999999999999999999999988


Q ss_pred             HHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccc
Q 048184          173 KLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFL  252 (512)
Q Consensus       173 ~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~  252 (512)
                      .|.          ++.+++.++++.+++++++.++||.+.....       ..+...+..+....      ..+|+.  +
T Consensus       159 ~~~----------~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~--~  213 (463)
T PLN02196        159 SWE----------GTQINTYQEMKTYTFNVALLSIFGKDEVLYR-------EDLKRCYYILEKGY------NSMPIN--L  213 (463)
T ss_pred             cCC----------CCeEEeHHHHHHHHHHHHHHHHcCCCCchHH-------HHHHHHHHHHhcch------hccccc--C
Confidence            762          3468999999999999999999998753221       22333222222111      112321  1


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH----------
Q 048184          253 DLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM----------  322 (512)
Q Consensus       253 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~----------  322 (512)
                       +....++..++.+.+.+++.+.++++++..       ....|+++.+++..      ..++++++...+          
T Consensus       214 -p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-------~~~~d~l~~ll~~~------~~l~~~ei~~~~~~~~~Ag~dT  279 (463)
T PLN02196        214 -PGTLFHKSMKARKELAQILAKILSKRRQNG-------SSHNDLLGSFMGDK------EGLTDEQIADNIIGVIFAARDT  279 (463)
T ss_pred             -CCccchHHHHHHHHHHHHHHHHHHHHhhcC-------CCcccHHHHHHhcC------CCCCHHHHHHHHHHHHHhhhHH
Confidence             112235667788889999999998876543       23568999988632      146677766554          


Q ss_pred             ----------HHhcCHHHHHHHHHHHHHHhcC---CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecC
Q 048184          323 ----------QLLKNPEVIQKATDELDRVIGR---NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAG  389 (512)
Q Consensus       323 ----------~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g  389 (512)
                                +|++||++|+|+++|++++.+.   ++.++.++++++|||+|||+||||++|++++.. |.+.+|++++|
T Consensus       280 ta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g  358 (463)
T PLN02196        280 TASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEG  358 (463)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCC
Confidence                      8999999999999999998864   356889999999999999999999999999976 99999999999


Q ss_pred             cccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhce
Q 048184          390 SNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFE  469 (512)
Q Consensus       390 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~  469 (512)
                      |.||||+.|+++.+++|+|+++|+||++|+||||+++.     .+..++|||.|+|.|+|++||+.|++++++.|+++|+
T Consensus       359 ~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~  433 (463)
T PLN02196        359 YLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYR  433 (463)
T ss_pred             EEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcE
Confidence            99999999999999999999999999999999999632     4568999999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCcccccCcccccCCCceeeeccC
Q 048184          470 WKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPR  504 (512)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  504 (512)
                      |++.++.    .+.  .+..+..|+.++.|+++++
T Consensus       434 ~~~~~~~----~~~--~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        434 WSIVGTS----NGI--QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             EEEcCCC----Cce--EEcccccCCCCceEEEecC
Confidence            9997652    222  2344567899999999875


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.5e-68  Score=532.48  Aligned_cols=435  Identities=32%  Similarity=0.522  Sum_probs=349.4

Q ss_pred             CCCCCCCceeeeccccC--CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh--h
Q 048184           48 PPGPKPWHLIVNLNLIG--QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH--A  123 (512)
Q Consensus        48 ppgP~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~--~  123 (512)
                      ||||+++|++||++.+.  +++++++.+++++||+||+++++++++++|+||+.+++|+..+...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999984  7889999999999999999999999999999999999999988767776544333332  1


Q ss_pred             ccCCcccccCCCChhHHHHHHHHHhhcCChh-HHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184          124 NYNYLVMPGAPYGPHWRQTRKIYMTQLLSPK-SLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI  202 (512)
Q Consensus       124 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~  202 (512)
                      ...+.++++.. ++.|+++|+.+ .+.|+.. .+ .+.+.+.+.++++++.|.....     ....+|+.++++.+++++
T Consensus        81 ~~~~~~l~~~~-~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~~~d~  152 (463)
T PF00067_consen   81 PFGGKGLFFSD-GERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG-----SSGPVDLFDWLRRFALDV  152 (463)
T ss_dssp             HHTTTSSTTSS-HHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT-----SESEEEHHHHHHHHHHHH
T ss_pred             ccccccccccc-ccccccccccc-cccccccccc-cccccccccccccccccccccc-----ccceeeeecccccccccc
Confidence            23345666665 79999999999 6888888 55 8999999999999999998765     344799999999999999


Q ss_pred             HHHHHhccccCcccccCCCChhHHHHHHHHHHhccCC--CCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 048184          203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGV--LDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHE  280 (512)
Q Consensus       203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  280 (512)
                      ++.++||.+++..++   .....+.+.+..+......  ..+...+|++.++ +....++..++.+.+.+++.+++++++
T Consensus       153 i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  228 (463)
T PF00067_consen  153 IGRVLFGKDFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERR  228 (463)
T ss_dssp             HHHHHHSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccceeeeccc---cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence            999999999874331   0123455555555433211  1233455655554 334567777888999999999999998


Q ss_pred             HhcccccccCCCcccHHHHHhccc-CCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHH
Q 048184          281 RHGKRKLFKEHGTNDIVDVLLQLA-DDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELD  339 (512)
Q Consensus       281 ~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~  339 (512)
                      ++.+..   .....|+++.++... ..++ +..++++++...+                    +|++||++|+++++||+
T Consensus       229 ~~~~~~---~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~  304 (463)
T PF00067_consen  229 EELDDG---DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEID  304 (463)
T ss_dssp             HSHHSS---SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cccccc---cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            877321   246789999999987 2221 1378888887765                    99999999999999999


Q ss_pred             HHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCC
Q 048184          340 RVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFC  419 (512)
Q Consensus       340 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  419 (512)
                      +++++++.++.+++++||||+|||+||||++|+++...+|++.+|++++||.|||||.|+++.+.+|+|+++|+||++|+
T Consensus       305 ~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~  384 (463)
T PF00067_consen  305 SVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFD  384 (463)
T ss_dssp             HHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99987778999999999999999999999999999666799999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCcee
Q 048184          420 PERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLV  499 (512)
Q Consensus       420 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  499 (512)
                      ||||++.+.........|+|||.|+|.|||++||+.|++++++.||++|||+++++..  ..+.....+++ .|+.++.|
T Consensus       385 P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~  461 (463)
T PF00067_consen  385 PERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSE--PEPQEQQNGFL-LPPKPLKV  461 (463)
T ss_dssp             TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSS--GGEEECSCSSS-EEESSSEE
T ss_pred             cccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCC--CCCccccCceE-eeCCCcEE
Confidence            9999988653345778999999999999999999999999999999999999987641  22222222344 44458877


Q ss_pred             ee
Q 048184          500 VP  501 (512)
Q Consensus       500 ~~  501 (512)
                      +|
T Consensus       462 ~~  463 (463)
T PF00067_consen  462 KF  463 (463)
T ss_dssp             EE
T ss_pred             eC
Confidence            65


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.9e-66  Score=518.04  Aligned_cols=442  Identities=20%  Similarity=0.320  Sum_probs=330.1

Q ss_pred             hcCCCCCCCCCCCCc----------------eeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHH
Q 048184           41 NKINLLPPPGPKPWH----------------LIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELL  103 (512)
Q Consensus        41 ~~~~~~~ppgP~~~p----------------~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i  103 (512)
                      +...+..+|||+.-.                .+||+..+ ++.++..+.+||++|||||++++|++++++|+||+.+++|
T Consensus       110 ~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eI  189 (633)
T PLN02738        110 NGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHI  189 (633)
T ss_pred             hhhhhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHH
Confidence            344456789998411                23444444 6778899999999999999999999899999999999999


Q ss_pred             HHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCC
Q 048184          104 LKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSS  183 (512)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  183 (512)
                      +..+...|.+++........  .+.++++ .+|+.|+++|+.+ .+.|+...++.+++.+.+.++.+++.|.....    
T Consensus       190 l~~~~~~f~k~~~~~~~~~~--~g~~l~~-~dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~----  261 (633)
T PLN02738        190 LRDNSKAYSKGILAEILEFV--MGKGLIP-ADGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAAS----  261 (633)
T ss_pred             HhhCcccCCCcchHHHHhhc--cCCceec-CCcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence            99776677766432222111  2345554 4599999999999 79999999999999999999999999986544    


Q ss_pred             CCCCceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHH
Q 048184          184 SSSTPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKA  263 (512)
Q Consensus       184 ~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~  263 (512)
                       .++.+|+.+.+..+++|+++.++||.+++...+. ......+...+..+............+|++..++  ...++..+
T Consensus       262 -~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~  337 (633)
T PLN02738        262 -DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAE  337 (633)
T ss_pred             -CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHH
Confidence             5678999999999999999999999998753311 1122223333332221110000001122222221  11244555


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccc------ccCCCcccHHHHHhcccCCccccccccHHHHHHHH---------------
Q 048184          264 VKKKIDKFYEHVLHEHERHGKRKL------FKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM---------------  322 (512)
Q Consensus       264 ~~~~l~~~~~~~i~~~~~~~~~~~------~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~---------------  322 (512)
                      ..+.+.+++..+++.++...+...      .......|+++.|++...      .++++++...+               
T Consensus       338 ~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~~------~ls~~~L~~e~~~ll~AG~eTTA~tL  411 (633)
T PLN02738        338 ALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASGD------DVSSKQLRDDLMTMLIAGHETSAAVL  411 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcCC------CCCHHHHHHHHHHHHhcCCccHHHHH
Confidence            566666666666665443211100      001234689999987532      45666666544               


Q ss_pred             -----HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCE
Q 048184          323 -----QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSR  397 (512)
Q Consensus       323 -----~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~  397 (512)
                           +|+.||++|+||++||++++++ +.++++++++||||+|||+|+||++|+++... |.+.+|.+++||.|||||.
T Consensus       412 t~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~  489 (633)
T PLN02738        412 TWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGED  489 (633)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccc-eeeccCceECCEEECCCCE
Confidence                 9999999999999999999984 56899999999999999999999999999965 9999999999999999999


Q ss_pred             EEEehhhhccCCCCCCCCCCCCCCCCCCCCC--CcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCC
Q 048184          398 VIVNVWAIGRDPTLWEKPNEFCPERFVGKEI--DVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGD  475 (512)
Q Consensus       398 v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~  475 (512)
                      |.++.+.+||||++||||++|+||||+.+..  +.......|+|||.|+|.|+|++||++|++++++.|+++|+|++.++
T Consensus       490 V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~  569 (633)
T PLN02738        490 IFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPG  569 (633)
T ss_pred             EEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCC
Confidence            9999999999999999999999999985321  11234568999999999999999999999999999999999999866


Q ss_pred             CCCCCCCcccccCcccccCCCceeeeccCCC
Q 048184          476 MKKEDLDMEERFGGRTSRKNPLLVVPKPRLP  506 (512)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~  506 (512)
                      .  +  +.....+.++.|+++++|++++|..
T Consensus       570 ~--~--~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        570 A--P--PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             C--C--CcccccceEEeeCCCcEEEEEECCC
Confidence            3  1  2223346778888999999999954


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.2e-65  Score=507.64  Aligned_cols=433  Identities=15%  Similarity=0.227  Sum_probs=323.2

Q ss_pred             CCCCCCCCCceeeeccccCC---CccHHHHHHHhhcCCceE---EecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhh
Q 048184           46 LPPPGPKPWHLIVNLNLIGQ---NLHVSLQSLSQKYGPLMQ---LKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLA  119 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~~---~~~~~~~~~~~kyG~v~~---~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~  119 (512)
                      +..|||+++|++||+..+..   ..++++.+...+||..++   .++|+.++++|+||+.+++|+.++...|.+++....
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            34899999999999977622   233444444455887665   577899999999999999999987777777654322


Q ss_pred             hhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHH--hHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHH
Q 048184          120 WKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQ--FEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFM  197 (512)
Q Consensus       120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~  197 (512)
                      ..  ...+.++++++ |+.|+++||.+ +|.|+...++.  +.+.+.++++.+++.+.+...     .++.+|+.+.+.+
T Consensus       111 ~~--~~~g~gl~~~~-g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~  181 (500)
T PLN02169        111 IF--DVLGEGILTVD-FELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH-----ENIIIDLQDVFMR  181 (500)
T ss_pred             HH--HhhcCcccccC-cHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCeEeHHHHHHH
Confidence            22  22346776665 99999999999 79999887764  346677888888888875443     4567999999999


Q ss_pred             HHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccc----ccccchHHHHHHHHHHHHHHHH
Q 048184          198 FNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAF----LDLQGNIKRMKAVKKKIDKFYE  273 (512)
Q Consensus       198 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~l~~~~~  273 (512)
                      +++|+++.++||.+.+..+..  .....+...++.......   ...+.|++.+    +.+.+..++..+..+.+.+++.
T Consensus       182 ~t~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (500)
T PLN02169        182 FMFDTSSILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFA  256 (500)
T ss_pred             HHHHHHHhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence            999999999999987543211  011234444333222110   1112343221    1123345677888999999999


Q ss_pred             HHHHHHHHhcccccccCCCcccHHHHHhcccCCc-cccccccHHHHHHHH--------------------HHhcCHHHHH
Q 048184          274 HVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDP-TLEVKLERDHIKASM--------------------QLLKNPEVIQ  332 (512)
Q Consensus       274 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~--------------------~L~~~p~~~~  332 (512)
                      ++|+++++.............|+++.+++...++ ..+..++++++..++                    +|+.||++|+
T Consensus       257 ~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~  336 (500)
T PLN02169        257 KIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMA  336 (500)
T ss_pred             HHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHH
Confidence            9999887652111001112468999998764321 101246677776655                    9999999999


Q ss_pred             HHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccce-ecCcccCCCCEEEEehhhhccCCCC
Q 048184          333 KATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCK-VAGSNILKNSRVIVNVWAIGRDPTL  411 (512)
Q Consensus       333 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~-i~g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      |+++||++++      +.+++++||||+|||+||||++|++|... |.+.+|.+ ++|+.|||||.|.++.+++||||++
T Consensus       337 kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~  409 (500)
T PLN02169        337 KIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSV  409 (500)
T ss_pred             HHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccc
Confidence            9999999873      67899999999999999999999999987 77666555 5999999999999999999999999


Q ss_pred             C-CCCCCCCCCCCCCCCCCcc-cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCc
Q 048184          412 W-EKPNEFCPERFVGKEIDVV-GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGG  489 (512)
Q Consensus       412 ~-~~p~~F~p~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  489 (512)
                      | +||++|+||||++++++.. ..+..|+|||+|+|.|+|++||++|++++++.||++|+|+++++.   ++  ....+.
T Consensus       410 w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~  484 (500)
T PLN02169        410 WGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSI  484 (500)
T ss_pred             cCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccce
Confidence            9 8999999999997644322 236789999999999999999999999999999999999997653   22  234567


Q ss_pred             ccccCCCceeeeccC
Q 048184          490 RTSRKNPLLVVPKPR  504 (512)
Q Consensus       490 ~~~~~~~~~v~~~~R  504 (512)
                      +++|+++++|++++|
T Consensus       485 ~l~~~~gl~l~l~~~  499 (500)
T PLN02169        485 LLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEecCCCEEEEEEeC
Confidence            889999999999987


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.5e-65  Score=510.68  Aligned_cols=436  Identities=19%  Similarity=0.243  Sum_probs=323.7

Q ss_pred             CCCCCCCceeeeccccCCCccHHHHHHHhhc---CCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184           48 PPGPKPWHLIVNLNLIGQNLHVSLQSLSQKY---GPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN  124 (512)
Q Consensus        48 ppgP~~~p~lG~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~  124 (512)
                      +|||+++|++||++.+..+ +..+.+|.++|   |++|+++++++++++++||+.+++|+.++...|.++......... 
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~-  109 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV-  109 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH-
Confidence            7999999999998765332 34566777777   899999999999999999999999998765566655432211111 


Q ss_pred             cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHH-HHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHH
Q 048184          125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIR-IEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIM  203 (512)
Q Consensus       125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~  203 (512)
                      ..+.+++. .+|+.|+++||.+ ++.|+..+++.+.+.+ .+.++.+++.+.....     .+..+|+.++++.+++|++
T Consensus       110 ~~g~~l~~-~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~~~dvi  182 (516)
T PLN03195        110 LLGDGIFN-VDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASF-----ANQVVDMQDLFMRMTLDSI  182 (516)
T ss_pred             HhcCeeec-cCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCeEcHHHHHHHHHHHHH
Confidence            12345544 4699999999999 7999999999999876 6667777777765332     4567999999999999999


Q ss_pred             HHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccc--ccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048184          204 SRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWL--AFLDLQGNIKRMKAVKKKIDKFYEHVLHEHER  281 (512)
Q Consensus       204 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l--~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  281 (512)
                      +.++||.+++..+....  ...+...++........   ....|++  ..+.+....+++.+..+.+.+++.++++++++
T Consensus       183 ~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (516)
T PLN03195        183 CKVGFGVEIGTLSPSLP--ENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKA  257 (516)
T ss_pred             HHHHhCCCccccccCCC--ccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999875432110  12333333332211100   0011211  11111122345566778888999999988876


Q ss_pred             hccccc-ccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHH
Q 048184          282 HGKRKL-FKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDR  340 (512)
Q Consensus       282 ~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~  340 (512)
                      ...... .......|+++.++++..+.  +..++++++..++                    +|+.||++|+|+++|+++
T Consensus       258 ~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  335 (516)
T PLN03195        258 EMDEARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKA  335 (516)
T ss_pred             HHhccccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            532110 01123568999999765432  2358888887665                    999999999999999999


Q ss_pred             HhcC--------------------CccccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee-cCcccCCCCEEE
Q 048184          341 VIGR--------------------NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV-AGSNILKNSRVI  399 (512)
Q Consensus       341 ~~~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~  399 (512)
                      +++.                    ++.++++++++||||+|||+||||++|+++... |.+.+|.++ +|+.|||||.|.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~  414 (516)
T PLN03195        336 LEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVT  414 (516)
T ss_pred             hhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEE
Confidence            8643                    245788999999999999999999999999986 777676665 999999999999


Q ss_pred             EehhhhccCCCCC-CCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCC
Q 048184          400 VNVWAIGRDPTLW-EKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKK  478 (512)
Q Consensus       400 ~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~  478 (512)
                      ++.+++||||++| +||++|+||||++++......+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.  
T Consensus       415 ~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~--  492 (516)
T PLN03195        415 YVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH--  492 (516)
T ss_pred             EehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC--
Confidence            9999999999999 9999999999996432112345679999999999999999999999999999999999997552  


Q ss_pred             CCCCcccccCcccccCCCceeeeccCC
Q 048184          479 EDLDMEERFGGRTSRKNPLLVVPKPRL  505 (512)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~v~~~~R~  505 (512)
                       +..  .....++.|+.+++|++++|.
T Consensus       493 -~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        493 -PVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             -cce--eeeeeEEecCCCEEEEEEeCC
Confidence             222  233456788999999999883


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.4e-64  Score=504.43  Aligned_cols=418  Identities=20%  Similarity=0.272  Sum_probs=325.9

Q ss_pred             CCCCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCC--ceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc
Q 048184           44 NLLPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGP--LMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP  116 (512)
Q Consensus        44 ~~~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~  116 (512)
                      +.+.||||+++|++|+++.+     .++++.++.+++++||+  +|++++++.++++++||+.+++++.++ ..|.++..
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            33679999999999998876     35789999999999997  799999999999999999999999865 45655432


Q ss_pred             hhhhhhhccCCcccccCCCChhHHHHHHHHHhhcC-ChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH
Q 048184          117 LLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLL-SPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL  195 (512)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~  195 (512)
                      .....  ..+ .+.+...+|+.|+++|+.+ .+.| +++.++.+.+.+.+.++++++.+..         .+.+|+.+++
T Consensus       119 ~~~~~--~~g-~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~---------~~~v~~~~~~  185 (490)
T PLN02302        119 ESTVE--LIG-RKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK---------MGEIEFLTEL  185 (490)
T ss_pred             hhHHH--Hhc-cccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC---------CCCEehHHHH
Confidence            22111  122 2333444599999999999 6888 5788999999999999999998842         2359999999


Q ss_pred             HHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHH
Q 048184          196 FMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHV  275 (512)
Q Consensus       196 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  275 (512)
                      ..+++++++.++||.+++...       ..+...+..+.......  ...+|..       ..++..++.+.+.+++.+.
T Consensus       186 ~~~~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~p~~-------~~~~~~~~~~~l~~~~~~~  249 (490)
T PLN02302        186 RKLTFKIIMYIFLSSESELVM-------EALEREYTTLNYGVRAM--AINLPGF-------AYHRALKARKKLVALFQSI  249 (490)
T ss_pred             HHHHHHHHHHHHcCCCChHHH-------HHHHHHHHHHHHHhhhC--CcCCCch-------hhHHHHHHHHHHHHHHHHH
Confidence            999999999999998865432       33333222222111111  1112221       1234556678888999999


Q ss_pred             HHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184          276 LHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKAT  335 (512)
Q Consensus       276 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~  335 (512)
                      ++++++..+..  ......|+++.+++...++  +..++++++..++                    +|++||++|+|++
T Consensus       250 i~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~  325 (490)
T PLN02302        250 VDERRNSRKQN--ISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAK  325 (490)
T ss_pred             HHHHHHhhhcc--CCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            98887654211  1134579999999875433  2357888877654                    8999999999999


Q ss_pred             HHHHHHhcCC----ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCC
Q 048184          336 DELDRVIGRN----KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTL  411 (512)
Q Consensus       336 ~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      +|++++++..    ..++.+++++||||+|||+|+||++|+++... |.+.+|++++||.||||+.|.++.+++|+|+++
T Consensus       326 ~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~-R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~  404 (490)
T PLN02302        326 AEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVF-REAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEV  404 (490)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccch-hcccCCEeECCEEECCCCEEEeeHHHhcCCccc
Confidence            9999998642    12788999999999999999999999999864 999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCccc
Q 048184          412 WEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRT  491 (512)
Q Consensus       412 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  491 (512)
                      |+||++|+||||+++.    ..+..++|||+|+|.|+|++||..|++++++.|+++|||++.++.    .+..  ....+
T Consensus       405 ~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~  474 (490)
T PLN02302        405 YPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHP  474 (490)
T ss_pred             CCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCC
Confidence            9999999999999653    245689999999999999999999999999999999999997542    1222  22337


Q ss_pred             ccCCCceeeeccCCC
Q 048184          492 SRKNPLLVVPKPRLP  506 (512)
Q Consensus       492 ~~~~~~~v~~~~R~~  506 (512)
                      .|..++.|++++|+.
T Consensus       475 ~p~~~~~~~~~~~~~  489 (490)
T PLN02302        475 RPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCceEEEEeccC
Confidence            888999999999863


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6.5e-65  Score=499.14  Aligned_cols=417  Identities=20%  Similarity=0.227  Sum_probs=322.6

Q ss_pred             CCCCCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCch
Q 048184           43 INLLPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPL  117 (512)
Q Consensus        43 ~~~~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~  117 (512)
                      ++++.||||+++|++||++.+     ..+++.++.+|+++||+||++++|++++||++||+.+++++.+++..|..+...
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~   83 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK   83 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence            445679999999999999887     246889999999999999999999999999999999999999887777655321


Q ss_pred             hhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHH-hHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH
Q 048184          118 LAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQ-FEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF  196 (512)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~  196 (512)
                       ..... .+..++ +..+|+.|+++|+++ .+.|+...+.. +.+.+.+.++++++.+.         .+..+++.+.+.
T Consensus        84 -~~~~l-~g~~~~-~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~  150 (452)
T PLN03141         84 -SLTEL-MGKSSI-LLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR---------DDPPVLVQDETK  150 (452)
T ss_pred             -hHHHH-hCcccc-cccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc---------CCCCEEhHHHHH
Confidence             12222 222234 444599999999998 68888777765 35566666666665542         345799999999


Q ss_pred             HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 048184          197 MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVL  276 (512)
Q Consensus       197 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  276 (512)
                      .+++++++.++||.+++...       ..+...+..+......  +...+|.       ....+..++.+++.+++..+|
T Consensus       151 ~~~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i  214 (452)
T PLN03141        151 KIAFEVLVKALISLEPGEEM-------EFLKKEFQEFIKGLMS--LPIKLPG-------TRLYRSLQAKKRMVKLVKKII  214 (452)
T ss_pred             HHHHHHHHHHHcCCCchHHH-------HHHHHHHHHHhhhHHh--CccCCCc-------hHhHHHHHHHHHHHHHHHHHH
Confidence            99999999999998764322       3333333333322111  1111221       112445567889999999999


Q ss_pred             HHHHHhccccc-ccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184          277 HEHERHGKRKL-FKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKAT  335 (512)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~  335 (512)
                      +++++..+... .+.....|+++.++++..     ..++++++..++                    +|+.||++|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~  289 (452)
T PLN03141        215 EEKRRAMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLT  289 (452)
T ss_pred             HHHHHHHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHH
Confidence            98876542110 000124689999997642     257777776654                    8999999999999


Q ss_pred             HHHHHHhc----CCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCC
Q 048184          336 DELDRVIG----RNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTL  411 (512)
Q Consensus       336 ~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      +|++++.+    .+..++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++|+|+++
T Consensus       290 ~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~  368 (452)
T PLN03141        290 EENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEEN  368 (452)
T ss_pred             HHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchh
Confidence            99998863    244578899999999999999999999999865 6999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCccc
Q 048184          412 WEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRT  491 (512)
Q Consensus       412 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  491 (512)
                      |+||++|+||||++++.    .+..|+|||+|+|.|+|++||.+|++++++.|+++|||++.++.   ..     ...++
T Consensus       369 ~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~  436 (452)
T PLN03141        369 YDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTV  436 (452)
T ss_pred             cCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----ecccc
Confidence            99999999999997532    35689999999999999999999999999999999999987552   11     12478


Q ss_pred             ccCCCceeeeccCCC
Q 048184          492 SRKNPLLVVPKPRLP  506 (512)
Q Consensus       492 ~~~~~~~v~~~~R~~  506 (512)
                      +|..++.|++++|++
T Consensus       437 ~~~~~~~~~~~~~~~  451 (452)
T PLN03141        437 RMKRKLPIWVTRIDD  451 (452)
T ss_pred             cCCCCceEEEEeCCC
Confidence            899999999999976


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-64  Score=452.30  Aligned_cols=424  Identities=20%  Similarity=0.265  Sum_probs=347.6

Q ss_pred             CCCCCCCC-CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184           46 LPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN  124 (512)
Q Consensus        46 ~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~  124 (512)
                      ..||.-++ +||+|++..|+.++..+++++++||||||++.++|+.+.++.+|+....++......++....+.......
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            35777664 79999999999999999999999999999999999999999999999999987644454443333333333


Q ss_pred             cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHH-HHhhccCCCCCCCCceeHHHHHHHHHHHHH
Q 048184          125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFK-LYKSSTSSSSSSSTPVHLKERLFMFNLAIM  203 (512)
Q Consensus       125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~  203 (512)
                      + |++++....+.....+.+.+ ...+....++.+.+.|.++..+.+.. +.   +     +|++..+.++++.+++.+.
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~---~-----s~~~d~l~~~~~~ii~tAs  180 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLG---E-----SGETDGLYTFCRLIIFTAS  180 (486)
T ss_pred             c-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhcccc---c-----ccchhHhhhhhHHHhhhhH
Confidence            3 36677666677888888888 79999999999999999999988876 22   1     6778889999999999999


Q ss_pred             HHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 048184          204 SRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHG  283 (512)
Q Consensus       204 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  283 (512)
                      -.++||+.....+       ......+.++......+  ...||.  ++ |....++..++++.+.+.+...+.++++..
T Consensus       181 ~~ll~~e~r~~~d-------~~~a~l~~dLd~~F~~~--d~~FP~--~L-P~~~~r~~~ra~~~i~k~f~~~i~~rr~s~  248 (486)
T KOG0684|consen  181 RLLLGGEVRDQLD-------ADVAKLYHDLDQGFQPF--DFLFPY--NL-PIPLLRRRDRARKKISKIFSKIILDRRASI  248 (486)
T ss_pred             HHhhhhhhhhhhc-------chHHHHHHHHhccccch--Hhhccc--CC-CcchhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9899998876654       56666777776654433  234563  22 233346666999999999999999999886


Q ss_pred             ccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhc
Q 048184          284 KRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIG  343 (512)
Q Consensus       284 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~  343 (512)
                            .....|+++.+++...+   +..++++|+...+                    +|++|||+++.+++|+.+++|
T Consensus       249 ------s~~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG  319 (486)
T KOG0684|consen  249 ------SKWDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLG  319 (486)
T ss_pred             ------ccccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhh
Confidence                  34567899999983333   3377788876554                    999999999999999999998


Q ss_pred             CCcc-ccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecC----cccCCCCEEEEehhhhccCCCCCCCCCCC
Q 048184          344 RNKW-VEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAG----SNILKNSRVIVNVWAIGRDPTLWEKPNEF  418 (512)
Q Consensus       344 ~~~~-~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  418 (512)
                      .... ++.+.+++||+|++||+|||||+||.+... |.+.+|+++.+    |.||+|..|.+++..+|+||++|+||+.|
T Consensus       320 ~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~F  398 (486)
T KOG0684|consen  320 EKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDF  398 (486)
T ss_pred             ccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhC
Confidence            7544 999999999999999999999999998877 99999999976    99999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcc----cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC
Q 048184          419 CPERFVGKEIDVV----GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK  494 (512)
Q Consensus       419 ~p~R~l~~~~~~~----~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (512)
                      +|+||++++++..    .-.+.+||||+|.|.|||++||.+|+|.++..+|+.||+++.++ ..+++++.   ..+..|.
T Consensus       399 k~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s---~~v~~P~  474 (486)
T KOG0684|consen  399 KPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYS---RMVMQPE  474 (486)
T ss_pred             ChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHH---HhhcCCC
Confidence            9999997765431    12345799999999999999999999999999999999999987 33444543   3478999


Q ss_pred             CCceeeeccCC
Q 048184          495 NPLLVVPKPRL  505 (512)
Q Consensus       495 ~~~~v~~~~R~  505 (512)
                      ++|.|+-|.|+
T Consensus       475 g~v~irYK~R~  485 (486)
T KOG0684|consen  475 GDVRIRYKRRP  485 (486)
T ss_pred             CCceEEEeecC
Confidence            99999999985


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.1e-63  Score=489.11  Aligned_cols=412  Identities=17%  Similarity=0.205  Sum_probs=316.9

Q ss_pred             CCCCCCCCCceeeeccccC-----CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184           46 LPPPGPKPWHLIVNLNLIG-----QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW  120 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~  120 (512)
                      +.||||.++|++||++++.     .+++.++.+++++||++|+++++++++++|+||+.+++++.++...|.++......
T Consensus        30 ~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~  109 (472)
T PLN02987         30 RLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSIS  109 (472)
T ss_pred             CCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHH
Confidence            5789999999999998762     46888999999999999999999999999999999999999887777665432222


Q ss_pred             hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184          121 KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL  200 (512)
Q Consensus       121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~  200 (512)
                      ..  .++.++++. +|+.|+++|+.+ .+.++.+.++.+.   ..++.++++.....       ..+++++.+.++.+++
T Consensus       110 ~~--lg~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~t~  175 (472)
T PLN02987        110 NL--LGKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFNLDS-------WSSRVLLMEEAKKITF  175 (472)
T ss_pred             HH--hCccccccc-CcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHHHHh-------hccceehHHHHHHHHH
Confidence            22  233456555 599999999998 5655545554432   22233343332221       1236999999999999


Q ss_pred             HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 048184          201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHE  280 (512)
Q Consensus       201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  280 (512)
                      +++++++||.+.+...       +.+...+.......    ....+|++     ....++..+..+++.+++.+++++++
T Consensus       176 ~vi~~~~fg~~~~~~~-------~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        176 ELTVKQLMSFDPGEWT-------ESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHHHHcCCCChHHH-------HHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998764322       33333333222211    11123443     12346778889999999999999987


Q ss_pred             HhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHH
Q 048184          281 RHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDR  340 (512)
Q Consensus       281 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~  340 (512)
                      +....   +.....|+++.+++...      .++++++...+                    +|+.||++|+++++|+++
T Consensus       240 ~~~~~---~~~~~~d~l~~ll~~~~------~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~  310 (472)
T PLN02987        240 KEEEE---GAEKKKDMLAALLASDD------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEK  310 (472)
T ss_pred             hhhhc---cCcccccHHHHHHhcCC------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            65421   11235799999997632      46777776654                    899999999999999999


Q ss_pred             HhcC---CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCC
Q 048184          341 VIGR---NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNE  417 (512)
Q Consensus       341 ~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  417 (512)
                      +.+.   +..++.+++.+|||++||++||||++|+++.. +|.+.+|++++||.||||+.|+++.+.+|+|+++|+||++
T Consensus       311 ~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~  389 (472)
T PLN02987        311 IRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDART  389 (472)
T ss_pred             HHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccc
Confidence            8752   34578899999999999999999999999865 5999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCc
Q 048184          418 FCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPL  497 (512)
Q Consensus       418 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (512)
                      |+||||++++.. ......++|||+|+|.|||++||..|++++++.|+++|+|++.++.   +    ..+..++.|.+++
T Consensus       390 F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~----~~~~~~~~p~~~~  461 (472)
T PLN02987        390 FNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---K----LVFFPTTRTQKRY  461 (472)
T ss_pred             cCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---c----eeecccccCCCCc
Confidence            999999975432 1234689999999999999999999999999999999999997653   2    1224588999999


Q ss_pred             eeeeccCC
Q 048184          498 LVVPKPRL  505 (512)
Q Consensus       498 ~v~~~~R~  505 (512)
                      .+++++|.
T Consensus       462 ~~~~~~r~  469 (472)
T PLN02987        462 PINVKRRD  469 (472)
T ss_pred             eEEEEecc
Confidence            99999994


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=6.3e-63  Score=488.62  Aligned_cols=432  Identities=22%  Similarity=0.296  Sum_probs=332.4

Q ss_pred             CCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh
Q 048184           47 PPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK  121 (512)
Q Consensus        47 ~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~  121 (512)
                      .--|-.|||++|+.+++     ++.++..+.+|+++||+||++++|+.++++++||+++++|+.+.+..|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34677889999998776     6788999999999999999999999999999999999999987767787765432211


Q ss_pred             hhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHH-HHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184          122 HANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEY-IRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL  200 (512)
Q Consensus       122 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~  200 (512)
                      ..  .+.+++++ +|+.|+++||.+ .+.|+...+..+.+ .+.++++.+++.+.....     .+.++|+.++++.+++
T Consensus        93 ~~--~~~~i~~~-~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-----~g~~vd~~~~~~~~~~  163 (489)
T PLN02936         93 FL--FGSGFAIA-EGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL-----SGEAVNMEAKFSQLTL  163 (489)
T ss_pred             HH--hcCccccC-CchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCceeHHHHHHHHHH
Confidence            11  13455554 599999999999 79999988888654 788899999999976543     4568999999999999


Q ss_pred             HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccc--cc-ccchHHHHHHHHHHHHHHHHHHHH
Q 048184          201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAF--LD-LQGNIKRMKAVKKKIDKFYEHVLH  277 (512)
Q Consensus       201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~-~~~~~~~~~~~~~~l~~~~~~~i~  277 (512)
                      ++++.++||.+++..+.+     ..+...+......... .....+|++.+  +. ..+..++..++.+.+.+++.+.++
T Consensus       164 dvi~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~  237 (489)
T PLN02936        164 DVIGLSVFNYNFDSLTTD-----SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVD  237 (489)
T ss_pred             HHHHHHHcCCCccccccC-----cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999764311     2233333222221111 11123343221  00 112245677788888899998888


Q ss_pred             HHHHhccccc-----c--cCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHH
Q 048184          278 EHERHGKRKL-----F--KEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEV  330 (512)
Q Consensus       278 ~~~~~~~~~~-----~--~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~  330 (512)
                      +++...+...     .  .+....|+++.|++...      .++.+++...+                    +|++||++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~  311 (489)
T PLN02936        238 KCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEA  311 (489)
T ss_pred             HHHHHHhhcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHH
Confidence            7765432110     0  01234689999987542      35666666443                    99999999


Q ss_pred             HHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCC
Q 048184          331 IQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPT  410 (512)
Q Consensus       331 ~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~  410 (512)
                      |+++++|++++++. ..++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||||+.|+++.+.+|+||+
T Consensus       312 ~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~  390 (489)
T PLN02936        312 LRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPE  390 (489)
T ss_pred             HHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChh
Confidence            99999999999885 34788999999999999999999999999988676688888899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCC--cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccC
Q 048184          411 LWEKPNEFCPERFVGKEID--VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFG  488 (512)
Q Consensus       411 ~~~~p~~F~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  488 (512)
                      +|+||++|+||||+.++..  ....+..|+|||.|+|.|||++||++|++++++.|+++|+++++++.   +...  ..+
T Consensus       391 ~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~~--~~~  465 (489)
T PLN02936        391 VWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIVM--TTG  465 (489)
T ss_pred             hCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccce--ecc
Confidence            9999999999999964321  12234589999999999999999999999999999999999998653   2222  335


Q ss_pred             cccccCCCceeeeccCC
Q 048184          489 GRTSRKNPLLVVPKPRL  505 (512)
Q Consensus       489 ~~~~~~~~~~v~~~~R~  505 (512)
                      +++.|+.++.|++++|.
T Consensus       466 ~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        466 ATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             eEEeeCCCeEEEEEeee
Confidence            66778889999999984


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.1e-61  Score=475.42  Aligned_cols=428  Identities=22%  Similarity=0.284  Sum_probs=318.5

Q ss_pred             CCceeeeccccCCCccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccc
Q 048184           53 PWHLIVNLNLIGQNLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMP  131 (512)
Q Consensus        53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (512)
                      +.++.|+....-.+.+.++.++.++|+ .+++++.++.  ++++||+.+++++..+...|.+........... .+.+++
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~g~gi~  124 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-LGRGIF  124 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-cCCcee
Confidence            356788876644556888888888887 5788876654  899999999999998767787654332221111 245665


Q ss_pred             cCCCChhHHHHHHHHHhhcCChhHHHHhH--HHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhc
Q 048184          132 GAPYGPHWRQTRKIYMTQLLSPKSLAQFE--YIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFG  209 (512)
Q Consensus       132 ~~~~g~~w~~~R~~~~~~~f~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG  209 (512)
                      .. +|+.|+++||.+ ++.|+...++.+.  +.+.+.++++++.+.+..+..   .+.++|+.++++.+++|+++.++||
T Consensus       125 ~~-~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~vd~~~~~~~~t~dvi~~~~fG  199 (502)
T PLN02426        125 NV-DGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDG---EGAVLDLQDVFRRFSFDNICKFSFG  199 (502)
T ss_pred             ec-CcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCceEcHHHHHHHHHHHHHHHHHhC
Confidence            55 599999999999 7999999998864  677788888888887543211   3467999999999999999999999


Q ss_pred             cccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 048184          210 KRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAF---LDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRK  286 (512)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~---~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  286 (512)
                      .+++..+..  ....++...++........ .....+|++.+   +.+.+..+++.+..+.+.+++.++|+++++..   
T Consensus       200 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~---  273 (502)
T PLN02426        200 LDPGCLELS--LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG---  273 (502)
T ss_pred             CCCcccCCC--CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence            998764311  1123344444433221100 00111232211   11223346777888999999999999987653   


Q ss_pred             cccCCCcccHHHHHhcccCCccccccccHHHHHHHH----------------HHhcCHHHHHHHHHHHHHHhcCC-cccc
Q 048184          287 LFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM----------------QLLKNPEVIQKATDELDRVIGRN-KWVE  349 (512)
Q Consensus       287 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~----------------~L~~~p~~~~~l~~Ei~~~~~~~-~~~~  349 (512)
                         .....|+++.++++..++.   .+ .+++..++                +|++||++|+|+++||+++++.+ ..++
T Consensus       274 ---~~~~~dll~~ll~~~~~~~---~l-~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t  346 (502)
T PLN02426        274 ---FSASKDLLSRFMASINDDK---YL-RDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAAS  346 (502)
T ss_pred             ---cCCcchHHHHHHhcCCCHH---HH-HHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCC
Confidence               1235799999997643221   11 11122111                99999999999999999998753 3689


Q ss_pred             ccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee-cCcccCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCC
Q 048184          350 EKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV-AGSNILKNSRVIVNVWAIGRDPTLW-EKPNEFCPERFVGKE  427 (512)
Q Consensus       350 ~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~  427 (512)
                      .+++++||||+|||+||||++|+++... |.+.+|.++ +|+.|||||.|.++.+++|||+++| |||++|+||||++++
T Consensus       347 ~~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~  425 (502)
T PLN02426        347 FEEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNG  425 (502)
T ss_pred             HHHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCC
Confidence            9999999999999999999999999876 999988887 9999999999999999999999999 999999999999743


Q ss_pred             CCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184          428 IDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL  505 (512)
Q Consensus       428 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  505 (512)
                      ......+..++|||+|+|.|+|++||++|++++++.|+++|+++++++.   ........+.+++|+++++|++++|.
T Consensus       426 ~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        426 VFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRS---NRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCC---CCCCcccceeEEecCCCEEEEEEEcc
Confidence            2112345689999999999999999999999999999999999997542   11112234678899999999999984


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.5e-55  Score=426.44  Aligned_cols=403  Identities=15%  Similarity=0.170  Sum_probs=278.8

Q ss_pred             CCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCC-ceEEecCCEeE-------EEcCCHHHHHHHHHh----cc
Q 048184           46 LPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGP-LMQLKFGLETV-------VVGSSAEVAELLLKT----YD  108 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvi~d~~~~~~i~~~----~~  108 (512)
                      +.|||+.++|++|+++++     ..++..++.+.++|||+ ||+++++|+++       |++++|+.++.+|.+    +.
T Consensus        17 ~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~   96 (480)
T PLN02648         17 REIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKR   96 (480)
T ss_pred             CCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcccc
Confidence            569999999999999864     45668999999999999 99999988665       999999999999975    33


Q ss_pred             cccCCCCchhhhhhhccCCc--ccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 048184          109 VTFASRPPLLAWKHANYNYL--VMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSS  186 (512)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  186 (512)
                      ..|..... ....  .+++.  ..++..+|+.|+++|+++ .+.|+ ..++.+.+.|.+.++++++.|.....     .+
T Consensus        97 ~~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~-----~~  166 (480)
T PLN02648         97 DVFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELA-----KK  166 (480)
T ss_pred             ccceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh-----hC
Confidence            33443221 1222  22322  134445699999999999 69999 57788999999999999999965422     34


Q ss_pred             CceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccc-cccc-----cccc-c-hH
Q 048184          187 TPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIP-WLAF-----LDLQ-G-NI  258 (512)
Q Consensus       187 ~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~-----~~~~-~-~~  258 (512)
                      .++|+.+.++.++++++++++||.+.+...     ..+.+...+..+......-.....+| ++..     ++.. . ..
T Consensus       167 ~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~  241 (480)
T PLN02648        167 GKAEFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVK  241 (480)
T ss_pred             CCccccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhh
Confidence            569999999999999999999998765411     11222222322221000000000111 1111     0000 0 01


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-HHhcCHH-HHHHHHH
Q 048184          259 KRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-QLLKNPE-VIQKATD  336 (512)
Q Consensus       259 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-~L~~~p~-~~~~l~~  336 (512)
                      +...+..+.+.+....+++...+.       +-...++.+.++-...-++ . .-+...+...+ +|++||+ +|+++++
T Consensus       242 ~~~~~~~~~~~~~~~~ll~~~~~~-------~l~~~ei~~~~l~~~~~~t-~-~~~~~~l~~~l~~L~~~p~~v~~klr~  312 (480)
T PLN02648        242 SDYDKLYDFFRASATEALDLAEKF-------GISREEALHNLLFVLGFNA-F-GGFKIFFPALLKWVGRAGEELQARLAE  312 (480)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHh-h-HHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            111222233333333333332221       1223344444442110000 0 00111222222 8999995 9999999


Q ss_pred             HHHHHhcC-CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceec----CcccCCCCEEEEehhhhccCCCC
Q 048184          337 ELDRVIGR-NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVA----GSNILKNSRVIVNVWAIGRDPTL  411 (512)
Q Consensus       337 Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~----g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      |++++++. ++.++++++++||||++||+|+||++|++++.. |.+.+|++++    ||.||||+.|+++.+.+|+|+++
T Consensus       313 Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~  391 (480)
T PLN02648        313 EVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKV  391 (480)
T ss_pred             HHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEChHHHhCCccc
Confidence            99999873 456899999999999999999999999999977 8899999996    79999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCcccCccceecc---------CCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCC
Q 048184          412 WEKPNEFCPERFVGKEIDVVGHNFELLPF---------GSGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDM  476 (512)
Q Consensus       412 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~  476 (512)
                      |+||++|+|+||++++.+   ....+++|         |+|+|.|+|++||+.|++++++.|+++|+ |++.++.
T Consensus       392 ~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        392 FDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            999999999999875322   11234444         67789999999999999999999999998 9997663


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1e-47  Score=369.19  Aligned_cols=363  Identities=25%  Similarity=0.338  Sum_probs=286.9

Q ss_pred             ccHHHHHHHhhcCCceEEecCCEe--EEEcCCHHHHHHHHHhcccccCCCCchhhhh--hhccCCcccccCCCChhHHHH
Q 048184           67 LHVSLQSLSQKYGPLMQLKFGLET--VVVGSSAEVAELLLKTYDVTFASRPPLLAWK--HANYNYLVMPGAPYGPHWRQT  142 (512)
Q Consensus        67 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  142 (512)
                      +......+.+.||++++++..+..  +++++++++++++++++. .+++........  .....+.+.+...+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455667788899999888876544  799999999999998763 222222111111  111223343445569999999


Q ss_pred             HHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhccccCcccccCCCC
Q 048184          143 RKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVT  222 (512)
Q Consensus       143 R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~  222 (512)
                      ||.+ .+.|+++.++.+.+.+.+.++++++.+ .        .+..+++.+.+..++.++++ .+||.+.+..       
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~--------~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-------  164 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-W--------QGGADLVLDFAAELTLRVIA-ELLGVPLEDR-------  164 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-c--------cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH-------
Confidence            9999 799999999999999999999999988 3        23778999999999999999 9999998554       


Q ss_pred             hhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhc
Q 048184          223 PKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQ  302 (512)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~  302 (512)
                       ..+............        |..   .+.....+..++.+++.+++..+|++++.         ....|+++.|+.
T Consensus       165 -~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~a~~~~~~~~~~li~~rR~---------~~~~dlls~l~~  223 (411)
T COG2124         165 -PQLLRWSDALLLRLD--------PDL---GPEEPWRRARAARRELDAYLRALIAERRA---------APRDDLLSLLLS  223 (411)
T ss_pred             -HHHHHHHHHHHhccC--------ccc---CCcccHHHHHHHHHHHHHHHHHHHHHhcc---------CCcccHHHHHHH
Confidence             222222222222100        111   11222467788899999999999999993         337899999999


Q ss_pred             ccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHH
Q 048184          303 LADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAI  362 (512)
Q Consensus       303 ~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  362 (512)
                      +..+++  ..++++|+..++                    .|++||++++++++|.+.                ||+.++
T Consensus       224 a~~~~~--~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~  285 (411)
T COG2124         224 AEDDGG--GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAV  285 (411)
T ss_pred             HhhCCC--CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHH
Confidence            887663  269999998876                    999999999999998764                899999


Q ss_pred             HHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCC
Q 048184          363 VKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGS  442 (512)
Q Consensus       363 i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~  442 (512)
                      ++|+||++|+++. ..|.+.+|++++|+.||||+.|+++.+++||||++|++|++|||+||.          ..|+|||+
T Consensus       286 v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~  354 (411)
T COG2124         286 VEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGG  354 (411)
T ss_pred             HHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCC
Confidence            9999999999999 669999999999999999999999999999999999999999999995          58999999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeeccC
Q 048184          443 GRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPR  504 (512)
Q Consensus       443 G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  504 (512)
                      |+|.|+|.+||++|++++++.|+++|++....+ . ..    .....+..+..+..+.++.|
T Consensus       355 G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~----~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         355 GPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-PP----LVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CC----ccccccccCCCcceeeeecC
Confidence            999999999999999999999999999988655 1 11    12345566667777777765


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=78.64  E-value=3.1  Score=32.88  Aligned_cols=22  Identities=23%  Similarity=0.469  Sum_probs=10.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHH
Q 048184           18 RSYSILAFFLPVLLLLYYRHIF   39 (512)
Q Consensus        18 ~~~~~l~~~~~~~~~~~~~~~~   39 (512)
                      .+++++++++++++++++++..
T Consensus         3 ~l~~iii~~i~l~~~~~~~~~r   24 (130)
T PF12273_consen    3 VLFAIIIVAILLFLFLFYCHNR   24 (130)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444444444444433


No 34 
>PHA03049 IMV membrane protein; Provisional
Probab=75.23  E-value=7.4  Score=25.79  Aligned_cols=34  Identities=12%  Similarity=0.226  Sum_probs=21.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 048184           17 TRSYSILAFFLPVLLLLYYRHIFRNKINLLPPPG   50 (512)
Q Consensus        17 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ppg   50 (512)
                      ..-.+++++|++++.+++|-.+.+.......||-
T Consensus         2 I~d~~l~iICVaIi~lIvYgiYnkk~~~q~~~p~   35 (68)
T PHA03049          2 IGDIILVIICVVIIGLIVYGIYNKKTTTSQNPPS   35 (68)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCC
Confidence            3445666777777777777777665544444444


No 35 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=66.90  E-value=32  Score=33.45  Aligned_cols=48  Identities=10%  Similarity=0.134  Sum_probs=23.6

Q ss_pred             CccHHHHHHHh-hcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCC
Q 048184           66 NLHVSLQSLSQ-KYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFAS  113 (512)
Q Consensus        66 ~~~~~~~~~~~-kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~  113 (512)
                      ++.+.++-..+ +||.|++-.+-++.+-|=.=|..-++-|.+....|+.
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            34444444443 7888887766665443322233333334444444443


No 36 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=65.01  E-value=16  Score=24.37  Aligned_cols=29  Identities=14%  Similarity=0.293  Sum_probs=18.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 048184           17 TRSYSILAFFLPVLLLLYYRHIFRNKINL   45 (512)
Q Consensus        17 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   45 (512)
                      ..-+.++++|++++.+++|-.+.+.+...
T Consensus         2 I~d~iLi~ICVaii~lIlY~iYnr~~~~q   30 (68)
T PF05961_consen    2 IGDFILIIICVAIIGLILYGIYNRKKTTQ   30 (68)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence            34455667777777777777666555443


No 37 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=51.17  E-value=67  Score=23.96  Aligned_cols=58  Identities=24%  Similarity=0.223  Sum_probs=39.6

Q ss_pred             CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC------CEeEEEcCCHHHHHHHHH
Q 048184           46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG------LETVVVGSSAEVAELLLK  105 (512)
Q Consensus        46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------~~~~vvi~d~~~~~~i~~  105 (512)
                      +.||.-..+-++-|++.  .-..+-+-++.-+||+|.++++|      |+-+||-.|-.+++....
T Consensus        12 rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~d   75 (124)
T KOG0114|consen   12 RLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACD   75 (124)
T ss_pred             CCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHH
Confidence            44555555666666543  22335566788899999999876      456788888888877765


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=49.61  E-value=7.7  Score=24.60  Aligned_cols=11  Identities=45%  Similarity=0.915  Sum_probs=8.9

Q ss_pred             eccCCCCCCCc
Q 048184          438 LPFGSGRRMCV  448 (512)
Q Consensus       438 ~~Fg~G~r~C~  448 (512)
                      -+||.|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999884


No 39 
>PHA03054 IMV membrane protein; Provisional
Probab=48.25  E-value=53  Score=22.29  Aligned_cols=24  Identities=25%  Similarity=0.346  Sum_probs=9.5

Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHH
Q 048184           15 NSTRSYSILAFFLPVLLLLYYRHI   38 (512)
Q Consensus        15 ~~~~~~~~l~~~~~~~~~~~~~~~   38 (512)
                      +....+++++++.++++.+++..+
T Consensus        45 ~~~~~~~ii~l~~v~~~~l~~flY   68 (72)
T PHA03054         45 CWGWYWLIIIFFIVLILLLLIYLY   68 (72)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHH
Confidence            333344444443333333333333


No 40 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=47.65  E-value=13  Score=29.37  Aligned_cols=39  Identities=13%  Similarity=0.243  Sum_probs=23.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceeeeccc
Q 048184           20 YSILAFFLPVLLLLYYRHIFRNKINLLPPPGPKPWHLIVNLNL   62 (512)
Q Consensus        20 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~lG~~~~   62 (512)
                      |++++++|++++++++...++++++++.  |-.  |+-|+.+.
T Consensus         2 W~l~~iii~~i~l~~~~~~~~~rRR~r~--G~~--P~~gt~w~   40 (130)
T PF12273_consen    2 WVLFAIIIVAILLFLFLFYCHNRRRRRR--GLQ--PIYGTRWM   40 (130)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHHHHHhhc--CCC--CcCCceec
Confidence            4566677777777777777777766543  443  44554433


No 41 
>PRK11486 flagellar biosynthesis protein FliO; Provisional
Probab=47.05  E-value=1.2e+02  Score=23.76  Aligned_cols=25  Identities=24%  Similarity=0.302  Sum_probs=17.0

Q ss_pred             ceEEecCCEeEEEcCCHHHHHHHHH
Q 048184           81 LMQLKFGLETVVVGSSAEVAELLLK  105 (512)
Q Consensus        81 v~~~~~~~~~~vvi~d~~~~~~i~~  105 (512)
                      |+-+.++++..++=-.+..|..+..
T Consensus        68 vvvVeV~~~~LlLGVT~~~I~~Lh~   92 (124)
T PRK11486         68 VVIVDVEDARLVLGVTAGQINLLHK   92 (124)
T ss_pred             EEEEEECCEEEEEEEccCceeehhc
Confidence            6666677777776667777666654


No 42 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=45.91  E-value=17  Score=28.39  Aligned_cols=23  Identities=13%  Similarity=0.377  Sum_probs=17.2

Q ss_pred             CCCcchHHHHHHHHHHHHHHHhh
Q 048184          445 RMCVGYALGLKIVQSTLANLLHG  467 (512)
Q Consensus       445 r~C~G~~~A~~e~~~~l~~ll~~  467 (512)
                      ..|.|+.||..++-.+|..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            38999999999999999999975


No 43 
>PHA02819 hypothetical protein; Provisional
Probab=38.88  E-value=88  Score=21.29  Aligned_cols=20  Identities=15%  Similarity=0.389  Sum_probs=7.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHH
Q 048184           19 SYSILAFFLPVLLLLYYRHI   38 (512)
Q Consensus        19 ~~~~l~~~~~~~~~~~~~~~   38 (512)
                      .+++++++.++++.+++..+
T Consensus        47 ~~~ii~l~~~~~~~~~~flY   66 (71)
T PHA02819         47 YYLIIGLVTIVFVIIFIIFY   66 (71)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333333333


No 44 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=38.39  E-value=21  Score=25.52  Aligned_cols=21  Identities=19%  Similarity=0.623  Sum_probs=18.3

Q ss_pred             HHHHHHHHHHHhhceeecCCC
Q 048184          455 KIVQSTLANLLHGFEWKLPGD  475 (512)
Q Consensus       455 ~e~~~~l~~ll~~f~~~~~~~  475 (512)
                      .-|+-+|..+|.-|||.|++.
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            357889999999999999865


No 45 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=38.30  E-value=19  Score=30.73  Aligned_cols=43  Identities=16%  Similarity=0.121  Sum_probs=32.7

Q ss_pred             CChhHHHHHHhhhhcCCCccccCCcc-ccccceecCcccCCCCEEEE
Q 048184          355 NLPYIQAIVKEVMRLHPPLTLLAPHK-ARENCKVAGSNILKNSRVIV  400 (512)
Q Consensus       355 ~lp~l~a~i~EtlRl~~~~~~~~~R~-~~~d~~i~g~~ip~G~~v~~  400 (512)
                      .-..+.|||.|+.-+..-...   |. ..+|+.++|..|||||.|..
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~v---rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRV---RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEE---EEEEcCceEECCEEeCCCCEEEE
Confidence            345678999999877643322   43 37899999999999999876


No 46 
>COG3190 FliO Flagellar biogenesis protein [Cell motility and secretion]
Probab=35.46  E-value=92  Score=24.67  Aligned_cols=21  Identities=19%  Similarity=0.387  Sum_probs=12.4

Q ss_pred             ceEEecCCEeEEEcCCHHHHH
Q 048184           81 LMQLKFGLETVVVGSSAEVAE  101 (512)
Q Consensus        81 v~~~~~~~~~~vvi~d~~~~~  101 (512)
                      |+-+.++....|+=-.++.|.
T Consensus        74 V~lV~V~~~~LVlGVt~q~I~   94 (137)
T COG3190          74 VVLVEVGDKRLVLGVTAQQIT   94 (137)
T ss_pred             EEEEEECCEEEEEEeccceeE
Confidence            677777776655544444443


No 47 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=33.76  E-value=8.1  Score=36.93  Aligned_cols=44  Identities=16%  Similarity=0.037  Sum_probs=33.7

Q ss_pred             CChhHHHHHHhhhhcCCCccccCCcc-ccccceecCcccCCCCEEEEe
Q 048184          355 NLPYIQAIVKEVMRLHPPLTLLAPHK-ARENCKVAGSNILKNSRVIVN  401 (512)
Q Consensus       355 ~lp~l~a~i~EtlRl~~~~~~~~~R~-~~~d~~i~g~~ip~G~~v~~~  401 (512)
                      .-..+.|||.|+.-+.--...   |. ..+|+.++|..|||||.|...
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~v---rlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAV---KLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEE---EEEEcCceeeCCEEecCCCEEEEE
Confidence            356788999999888743322   43 378999999999999998764


No 48 
>PRK06789 flagellar motor switch protein; Validated
Probab=33.58  E-value=37  Score=23.64  Aligned_cols=39  Identities=5%  Similarity=0.118  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCccccCCcccccc--ceecCcccCCCCEEEEe
Q 048184          363 VKEVMRLHPPLTLLAPHKAREN--CKVAGSNILKNSRVIVN  401 (512)
Q Consensus       363 i~EtlRl~~~~~~~~~R~~~~d--~~i~g~~ip~G~~v~~~  401 (512)
                      ++|-+.+.+-.-..+-|.+.++  +.++|..|.+|..|.+.
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            7889999988877777777665  45589999999998765


No 49 
>PHA02844 putative transmembrane protein; Provisional
Probab=30.08  E-value=1.5e+02  Score=20.44  Aligned_cols=20  Identities=15%  Similarity=0.070  Sum_probs=7.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHH
Q 048184           19 SYSILAFFLPVLLLLYYRHI   38 (512)
Q Consensus        19 ~~~~l~~~~~~~~~~~~~~~   38 (512)
                      .+++++++.++++.+++..+
T Consensus        49 ~~~ii~i~~v~~~~~~~flY   68 (75)
T PHA02844         49 KIWILTIIFVVFATFLTFLY   68 (75)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333333333


No 50 
>PF12669 P12:  Virus attachment protein p12 family
Probab=28.61  E-value=71  Score=20.99  Aligned_cols=6  Identities=17%  Similarity=0.678  Sum_probs=2.5

Q ss_pred             HHHHhh
Q 048184           36 RHIFRN   41 (512)
Q Consensus        36 ~~~~~~   41 (512)
                      +..++.
T Consensus        18 r~~~k~   23 (58)
T PF12669_consen   18 RKFIKD   23 (58)
T ss_pred             HHHHHH
Confidence            444433


No 51 
>PHA03162 hypothetical protein; Provisional
Probab=27.79  E-value=44  Score=25.89  Aligned_cols=25  Identities=16%  Similarity=0.303  Sum_probs=21.2

Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHH
Q 048184          441 GSGRRMCVGYALGLKIVQSTLANLL  465 (512)
Q Consensus       441 g~G~r~C~G~~~A~~e~~~~l~~ll  465 (512)
                      ++|++.|||+...+-|+-.=|+.|=
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLq   26 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQ   26 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHH
Confidence            5799999999999999887777663


No 52 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=27.78  E-value=1e+02  Score=18.22  Aligned_cols=25  Identities=20%  Similarity=0.472  Sum_probs=18.2

Q ss_pred             cccHHHHHHHH--HHhcCHHHHHHHHH
Q 048184          312 KLERDHIKASM--QLLKNPEVIQKATD  336 (512)
Q Consensus       312 ~l~~~~i~~~~--~L~~~p~~~~~l~~  336 (512)
                      .++.+.+..++  ...+||++++.++.
T Consensus         9 ~Ld~~qL~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen    9 TLDKDQLQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             TS-HHHHHHHHHHHHHHSTHHHHHHHT
T ss_pred             HcCHHHHHHHHHHHHHhChhHHHHHHh
Confidence            56677777776  66699999988765


No 53 
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=27.20  E-value=45  Score=32.68  Aligned_cols=30  Identities=17%  Similarity=0.162  Sum_probs=23.7

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCceeeecccc
Q 048184           34 YYRHIFRNKINLLPPPGPKPWHLIVNLNLI   63 (512)
Q Consensus        34 ~~~~~~~~~~~~~~ppgP~~~p~lG~~~~~   63 (512)
                      ..+|.|++.+++..+-||+++|-+||-+.+
T Consensus       115 asRWeWkrlkp~~p~nG~pPCPRlGHSFsl  144 (830)
T KOG4152|consen  115 ASRWEWKRLKPKTPKNGPPPCPRLGHSFSL  144 (830)
T ss_pred             hhhhhHhhcCCCCCCCCCCCCCccCceeEE
Confidence            457777777776777799999999997776


No 54 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=26.80  E-value=1.2e+02  Score=19.23  Aligned_cols=35  Identities=26%  Similarity=0.187  Sum_probs=25.3

Q ss_pred             HHHHHhhcCCceEEecC----CEeEEEcCCHHHHHHHHH
Q 048184           71 LQSLSQKYGPLMQLKFG----LETVVVGSSAEVAELLLK  105 (512)
Q Consensus        71 ~~~~~~kyG~v~~~~~~----~~~~vvi~d~~~~~~i~~  105 (512)
                      +.+...+||+|-++.+.    +.-+|-..+.++++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            34677899999887752    445677789999888875


No 55 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=26.74  E-value=38  Score=26.32  Aligned_cols=21  Identities=29%  Similarity=0.395  Sum_probs=17.7

Q ss_pred             cccccceecCcccCCCCEEEE
Q 048184          380 KARENCKVAGSNILKNSRVIV  400 (512)
Q Consensus       380 ~~~~d~~i~g~~ip~G~~v~~  400 (512)
                      .+++|.+++|-+||+|+.|+.
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            456799999999999999854


No 56 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=25.99  E-value=2.3e+02  Score=22.81  Aligned_cols=49  Identities=16%  Similarity=0.053  Sum_probs=35.9

Q ss_pred             eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184           56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT  106 (512)
Q Consensus        56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~  106 (512)
                      ++|++..-  -....++++.++||+|..+.+.         +--+|-..++++++.++..
T Consensus        38 fVgnL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         38 FIGGLSWG--TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEeCCCCC--CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            55655442  3457888899999998776652         3467888999999999864


No 57 
>PLN03120 nucleic acid binding protein; Provisional
Probab=25.61  E-value=2.9e+02  Score=24.90  Aligned_cols=58  Identities=14%  Similarity=0.091  Sum_probs=42.9

Q ss_pred             eeeeccccCCCccHHHHHHHhhcCCceEEec------CCEeEEEcCCHHHHHHHHHhcccccCCCC
Q 048184           56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF------GLETVVVGSSAEVAELLLKTYDVTFASRP  115 (512)
Q Consensus        56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~------~~~~~vvi~d~~~~~~i~~~~~~~~~~~~  115 (512)
                      ++||+..-  -..+.+++....||+|..+.+      .+.-+|-+.+++.++..+.-++..+..+.
T Consensus         8 fVgNLs~~--tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~   71 (260)
T PLN03120          8 KVSNVSLK--ATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQS   71 (260)
T ss_pred             EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCce
Confidence            56666542  345678888899999988876      35577888999999999877766666554


No 58 
>PF11027 DUF2615:  Protein of unknown function (DUF2615);  InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=25.53  E-value=1.5e+02  Score=22.24  Aligned_cols=12  Identities=33%  Similarity=0.481  Sum_probs=4.6

Q ss_pred             HHHHHHHHHHHH
Q 048184           22 ILAFFLPVLLLL   33 (512)
Q Consensus        22 ~l~~~~~~~~~~   33 (512)
                      ++++++++++++
T Consensus        60 ~~w~~~A~~ly~   71 (103)
T PF11027_consen   60 MLWMVLAMALYL   71 (103)
T ss_pred             HHHHHHHHHHHH
Confidence            333333333333


No 59 
>KOG4767 consensus Cytochrome c oxidase, subunit II, and related proteins [Energy production and conversion]
Probab=25.52  E-value=79  Score=26.59  Aligned_cols=43  Identities=19%  Similarity=0.184  Sum_probs=28.4

Q ss_pred             CCCCCccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 048184            2 EDPASSATADNPSNSTRSYSILAFFLPVLLLLYYRHIFRNKIN   44 (512)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   44 (512)
                      .|+|+|-|++.-+---..+..++++..++.+.++...+....+
T Consensus        13 Qdsasp~me~~~~~hd~~l~~L~~I~~lv~y~l~~~~~~~~~n   55 (231)
T KOG4767|consen   13 QDSASPIMEGIISFHDHLLFYLVFITVLVGYLLFGTFYTKSKN   55 (231)
T ss_pred             cccCChHHHhhhHhchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3677777777776666666666666666666666666655444


No 60 
>PF15050 SCIMP:  SCIMP protein
Probab=25.32  E-value=1.1e+02  Score=23.30  Aligned_cols=14  Identities=21%  Similarity=0.318  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHhh
Q 048184           28 PVLLLLYYRHIFRN   41 (512)
Q Consensus        28 ~~~~~~~~~~~~~~   41 (512)
                      .++++++|++.++.
T Consensus        24 glIlyCvcR~~lRq   37 (133)
T PF15050_consen   24 GLILYCVCRWQLRQ   37 (133)
T ss_pred             HHHHHHHHHHHHHc
Confidence            33445556666544


No 61 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=25.14  E-value=1.1e+02  Score=28.25  Aligned_cols=69  Identities=16%  Similarity=0.320  Sum_probs=43.7

Q ss_pred             HHHHHhhhhcCCCc---cccCCcccccccee---c-CcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCccc
Q 048184          360 QAIVKEVMRLHPPL---TLLAPHKARENCKV---A-GSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVG  432 (512)
Q Consensus       360 ~a~i~EtlRl~~~~---~~~~~R~~~~d~~i---~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~  432 (512)
                      +.+++.|..+.||.   |+++.-.++.|..+   + .-.|..||.|.++                              .
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------G  325 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------G  325 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------C
Confidence            56677888888865   44442333555444   1 4567888877543                              1


Q ss_pred             CccceeccCCCCCCCcchHHHHHHHHHHH
Q 048184          433 HNFELLPFGSGRRMCVGYALGLKIVQSTL  461 (512)
Q Consensus       433 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  461 (512)
                      ++++++-||.+  +-.||.+|. |+|.++
T Consensus       326 spYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         326 SPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence            44555556555  778999998 887765


No 62 
>PRK13664 hypothetical protein; Provisional
Probab=24.32  E-value=1.7e+02  Score=18.99  Aligned_cols=17  Identities=24%  Similarity=0.280  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 048184           23 LAFFLPVLLLLYYRHIF   39 (512)
Q Consensus        23 l~~~~~~~~~~~~~~~~   39 (512)
                      ++++++.+++-.++-..
T Consensus        12 ill~lvG~i~N~iK~l~   28 (62)
T PRK13664         12 VLVFLVGVLLNVIKDLK   28 (62)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            33444444444444443


No 63 
>PF14316 DUF4381:  Domain of unknown function (DUF4381)
Probab=24.09  E-value=1.7e+02  Score=23.58  Aligned_cols=6  Identities=50%  Similarity=1.127  Sum_probs=3.0

Q ss_pred             ChhHHH
Q 048184          136 GPHWRQ  141 (512)
Q Consensus       136 g~~w~~  141 (512)
                      |+.|-.
T Consensus        95 G~~W~~  100 (146)
T PF14316_consen   95 GQAWLQ  100 (146)
T ss_pred             HHHHHH
Confidence            555544


No 64 
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=23.82  E-value=51  Score=33.04  Aligned_cols=37  Identities=11%  Similarity=0.170  Sum_probs=25.8

Q ss_pred             CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEe
Q 048184           54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLET   90 (512)
Q Consensus        54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~   90 (512)
                      +-+.+.......-..+.+.++.++||||+-+++.+++
T Consensus       282 I~i~~s~~a~~~af~kHF~~L~~~YG~v~vvNLl~tK  318 (570)
T COG5329         282 IKVTRSSEAAQSAFDKHFDKLREKYGDVYVVNLLKTK  318 (570)
T ss_pred             eEEeccchhhHHHHHHHHHHHHHHcCCEEEEEcccCC
Confidence            3344433333455678999999999999999876544


No 65 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=23.80  E-value=27  Score=25.88  Aligned_cols=18  Identities=28%  Similarity=0.508  Sum_probs=15.1

Q ss_pred             CccceeccCCCCCCCcch
Q 048184          433 HNFELLPFGSGRRMCVGY  450 (512)
Q Consensus       433 ~~~~~~~Fg~G~r~C~G~  450 (512)
                      .....+|||.|.-.|.|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            446789999999999885


No 66 
>PF01708 Gemini_mov:  Geminivirus putative movement protein ;  InterPro: IPR002621 This family consists of putative movement proteins from Maize streak virus and Wheat dwarf virus [].; GO: 0046740 spread of virus in host, cell to cell, 0016021 integral to membrane
Probab=23.02  E-value=1.2e+02  Score=21.88  Aligned_cols=19  Identities=21%  Similarity=0.310  Sum_probs=8.5

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 048184           21 SILAFFLPVLLLLYYRHIF   39 (512)
Q Consensus        21 ~~l~~~~~~~~~~~~~~~~   39 (512)
                      ++++++.++++++.|.+..
T Consensus        41 ~i~~lvaVg~~YL~y~~fL   59 (91)
T PF01708_consen   41 AIFTLVAVGCLYLAYTWFL   59 (91)
T ss_pred             eehHHHHHHHHHHHHHHHH
Confidence            3333444444455555444


No 67 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=22.93  E-value=1.6e+02  Score=23.80  Aligned_cols=15  Identities=27%  Similarity=0.211  Sum_probs=7.6

Q ss_pred             CCCCCCCC---CCceeee
Q 048184           45 LLPPPGPK---PWHLIVN   59 (512)
Q Consensus        45 ~~~ppgP~---~~p~lG~   59 (512)
                      .+.||.|.   +-|--|+
T Consensus       176 rrsppepsgdgG~~~~G~  193 (215)
T PF05084_consen  176 RRSPPEPSGDGGGNDAGN  193 (215)
T ss_pred             cCCCCCCCCCCCCCcccc
Confidence            34466665   3454443


No 68 
>TIGR02736 cbb3_Q_epsi cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial. Members of this protein family are restricted to the epsilon branch of the Proteobacteria. All members are found in operons containing the other three structural subunits of the cbb3 type of cytochrome c oxidase. These small proteins show remote sequence similarity to the CcoQ subunit in other cytochrome c oxidase systems, so this family is assumed to represent the epsilonproteobacterial variant of CcoQ.
Probab=22.91  E-value=1.5e+02  Score=19.11  Aligned_cols=21  Identities=24%  Similarity=0.602  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh
Q 048184           21 SILAFFLPVLLLLYYRHIFRN   41 (512)
Q Consensus        21 ~~l~~~~~~~~~~~~~~~~~~   41 (512)
                      ++++++++++++.++.++.++
T Consensus         5 f~~ti~lvv~LYgY~yhLYrs   25 (56)
T TIGR02736         5 FAFTLLLVIFLYAYIYHLYRS   25 (56)
T ss_pred             HHHHHHHHHHHHHHHHHhhhh
Confidence            445555555566665555543


No 69 
>PF13980 UPF0370:  Uncharacterised protein family (UPF0370)
Probab=22.75  E-value=1.7e+02  Score=19.14  Aligned_cols=20  Identities=10%  Similarity=0.197  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 048184           20 YSILAFFLPVLLLLYYRHIF   39 (512)
Q Consensus        20 ~~~l~~~~~~~~~~~~~~~~   39 (512)
                      +++++++++.+++-.+.-..
T Consensus         8 WWiiLl~lvG~i~n~iK~L~   27 (63)
T PF13980_consen    8 WWIILLILVGMIINGIKELR   27 (63)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            44444445555544444443


No 70 
>PF06679 DUF1180:  Protein of unknown function (DUF1180);  InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=22.73  E-value=1.5e+02  Score=24.47  Aligned_cols=21  Identities=14%  Similarity=0.236  Sum_probs=11.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH
Q 048184           19 SYSILAFFLPVLLLLYYRHIF   39 (512)
Q Consensus        19 ~~~~l~~~~~~~~~~~~~~~~   39 (512)
                      ++++.++..+++++++++.++
T Consensus        98 ~~Vl~g~s~l~i~yfvir~~R  118 (163)
T PF06679_consen   98 LYVLVGLSALAILYFVIRTFR  118 (163)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            444455555555555555544


No 71 
>PF00076 RRM_1:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);  InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=21.33  E-value=2.5e+02  Score=18.34  Aligned_cols=47  Identities=23%  Similarity=0.147  Sum_probs=32.3

Q ss_pred             eeeccccCCCccHHHHHHHhhcCCceEEecCC--------EeEEEcCCHHHHHHHHH
Q 048184           57 IVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGL--------ETVVVGSSAEVAELLLK  105 (512)
Q Consensus        57 lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~--------~~~vvi~d~~~~~~i~~  105 (512)
                      +||++.-  -....+.++..+||++-.+.+..        .-+|...+.+.++.++.
T Consensus         3 v~nlp~~--~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~   57 (70)
T PF00076_consen    3 VGNLPPD--VTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALE   57 (70)
T ss_dssp             EESETTT--SSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHH
T ss_pred             EcCCCCc--CCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHH
Confidence            4555442  23467888899999986655422        34577789999999887


No 72 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=21.16  E-value=2.1e+02  Score=22.38  Aligned_cols=41  Identities=20%  Similarity=0.272  Sum_probs=31.4

Q ss_pred             CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhc
Q 048184           65 QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTY  107 (512)
Q Consensus        65 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~  107 (512)
                      .+....+++|.++||.+--.  .+...+...|++.++++....
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            44567999999999976432  245678899999999997653


No 73 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=21.00  E-value=2.4e+02  Score=21.38  Aligned_cols=10  Identities=30%  Similarity=-0.031  Sum_probs=6.9

Q ss_pred             Cceeeecccc
Q 048184           54 WHLIVNLNLI   63 (512)
Q Consensus        54 ~p~lG~~~~~   63 (512)
                      -|+.||+...
T Consensus        46 ~p~YgNL~~~   55 (107)
T PF15330_consen   46 DPCYGNLELQ   55 (107)
T ss_pred             Cccccccccc
Confidence            6778886554


No 74 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=20.30  E-value=79  Score=20.68  Aligned_cols=16  Identities=38%  Similarity=0.619  Sum_probs=14.0

Q ss_pred             HHhcCHHHHHHHHHHH
Q 048184          323 QLLKNPEVIQKATDEL  338 (512)
Q Consensus       323 ~L~~~p~~~~~l~~Ei  338 (512)
                      +|.+||++.+++.+.=
T Consensus         8 YLv~nPevl~kl~~g~   23 (57)
T PF05952_consen    8 YLVQNPEVLEKLKEGE   23 (57)
T ss_pred             HHHHChHHHHHHHcCC
Confidence            8999999999998843


No 75 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=20.25  E-value=70  Score=25.78  Aligned_cols=21  Identities=5%  Similarity=0.324  Sum_probs=18.0

Q ss_pred             cccceecCcccCCCCEEEEeh
Q 048184          382 RENCKVAGSNILKNSRVIVNV  402 (512)
Q Consensus       382 ~~d~~i~g~~ip~G~~v~~~~  402 (512)
                      .+|+.|+|..||+|++-+...
T Consensus        53 ~~dv~igGk~l~AG~Ysl~ti   73 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTI   73 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEe
Confidence            579999999999999876654


Done!