Query 048184
Match_columns 512
No_of_seqs 187 out of 1978
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 12:16:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 7.9E-73 2.7E-77 565.4 40.2 442 44-506 6-480 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 4.9E-73 1.7E-77 569.4 32.3 445 44-507 7-486 (507)
3 3tbg_A Cytochrome P450 2D6; mo 100.0 1.5E-72 5.1E-77 561.9 35.5 439 46-506 10-477 (479)
4 1po5_A Cytochrome P450 2B4; ox 100.0 7E-71 2.4E-75 548.3 36.7 434 46-507 10-475 (476)
5 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.2E-70 3.9E-75 548.8 38.3 428 46-504 24-482 (482)
6 3e6i_A CYPIIE1, P450-J, cytoch 100.0 8.4E-71 2.9E-75 548.7 37.1 438 44-507 8-474 (476)
7 3qz1_A Steroid 21-hydroxylase; 100.0 1.4E-71 4.8E-76 557.1 31.4 428 43-506 26-485 (496)
8 2hi4_A Cytochrome P450 1A2; CY 100.0 6.5E-71 2.2E-75 551.0 36.0 438 47-506 17-489 (495)
9 3s79_A Cytochrome P450 19A1; o 100.0 3.7E-71 1.3E-75 555.1 33.0 428 45-508 44-499 (503)
10 2fdv_A Cytochrome P450 2A6; CY 100.0 6.6E-71 2.3E-75 548.4 33.6 436 46-506 10-474 (476)
11 1r9o_A Cytochrome P450 2C9; mo 100.0 8.8E-71 3E-75 548.0 34.3 437 46-506 11-475 (477)
12 3ld6_A Lanosterol 14-alpha dem 100.0 1.6E-71 5.6E-76 550.5 28.0 423 46-506 11-455 (461)
13 3czh_A Cytochrome P450 2R1; vi 100.0 1.5E-70 5E-75 546.1 33.8 439 44-506 10-477 (481)
14 3nxu_A Cytochrome P450 3A4; al 100.0 6.3E-71 2.2E-75 550.8 30.2 433 46-506 14-476 (485)
15 2ve3_A Putative cytochrome P45 100.0 6.2E-69 2.1E-73 528.9 31.8 413 46-505 12-444 (444)
16 3n9y_A Cholesterol SIDE-chain 100.0 4.2E-68 1.4E-72 530.7 33.4 438 46-506 9-476 (487)
17 2cib_A Cytochrome P450 51; hem 100.0 5.4E-68 1.8E-72 523.9 31.4 426 46-508 4-452 (455)
18 3gw9_A Sterol 14alpha-demethyl 100.0 1.7E-67 5.7E-72 521.3 28.9 422 45-505 2-450 (450)
19 2ij2_A Cytochrome P450 BM3; mo 100.0 2.7E-66 9.2E-71 513.6 34.0 426 46-506 3-453 (470)
20 3i3k_A Lanosterol 14-alpha dem 100.0 2.8E-66 9.6E-71 513.5 27.9 422 45-503 10-453 (461)
21 3mdm_A Cholesterol 24-hydroxyl 100.0 3.5E-65 1.2E-69 505.0 35.1 410 64-506 9-443 (456)
22 3dbg_A Putative cytochrome P45 100.0 1E-66 3.5E-71 517.0 22.5 418 46-506 23-463 (467)
23 3v8d_A Cholesterol 7-alpha-mon 100.0 2.2E-64 7.7E-69 503.7 15.2 438 38-505 5-486 (491)
24 3dax_A Cytochrome P450 7A1; ch 100.0 3E-63 1E-67 496.1 19.7 435 41-506 8-487 (491)
25 3b6h_A Prostacyclin synthase; 100.0 5.3E-61 1.8E-65 480.4 25.9 434 42-506 14-491 (498)
26 2cd8_A Cytochrome P450 monooxy 100.0 4.3E-60 1.5E-64 463.0 30.0 379 46-507 26-431 (436)
27 1izo_A P450bsbeta, cytochrome 100.0 2.7E-59 9.3E-64 456.4 33.8 384 54-505 8-416 (417)
28 3b98_A Prostaglandin I2 syntha 100.0 1.9E-60 6.4E-65 473.9 22.0 422 42-506 14-472 (475)
29 3awm_A Fatty acid alpha-hydrox 100.0 4.3E-58 1.5E-62 447.6 31.6 385 48-504 4-413 (415)
30 1jfb_A Nitric-oxide reductase 100.0 5.8E-57 2E-61 438.0 35.5 354 47-475 2-382 (404)
31 1ued_A P450 OXYC, P450 monooxy 100.0 5.5E-57 1.9E-61 437.5 29.7 365 45-501 9-406 (406)
32 1n97_A CYP175A1; electron tran 100.0 3.1E-58 1.1E-62 444.1 19.5 383 50-505 3-387 (389)
33 3a4g_A Vitamin D hydroxylase; 100.0 1.6E-55 5.3E-60 427.3 34.8 362 62-508 17-405 (411)
34 2zbx_A Cytochrome P450-SU1; be 100.0 3.2E-55 1.1E-59 425.9 34.8 371 46-501 5-406 (412)
35 3aba_A Cytochrome P450; oxidor 100.0 4E-55 1.4E-59 424.0 34.6 360 62-505 16-403 (403)
36 1cpt_A Cytochrome P450-TERP; o 100.0 1.5E-55 5E-60 430.8 28.7 383 45-504 5-428 (428)
37 2zwu_A Camphor 5-monooxygenase 100.0 3.3E-55 1.1E-59 425.3 30.6 373 44-508 9-414 (415)
38 1odo_A Putative cytochrome P45 100.0 6.6E-55 2.3E-59 423.4 31.6 363 62-503 12-407 (408)
39 2jjn_A Cytochrome P450 113A1; 100.0 4.2E-55 1.4E-59 425.2 29.8 381 29-505 5-407 (411)
40 4fb2_A P450CIN; heme, monooxyg 100.0 3.1E-55 1.1E-59 424.5 28.5 356 62-506 16-395 (398)
41 3ejb_B Biotin biosynthesis cyt 100.0 1.2E-54 4E-59 421.8 31.9 361 63-505 11-397 (404)
42 3abb_A CYP105D6, cytochrome P4 100.0 2.2E-55 7.6E-60 426.7 26.4 359 61-505 20-408 (408)
43 1s1f_A Putative cytochrome P45 100.0 9.8E-55 3.3E-59 421.6 28.7 369 46-502 8-405 (406)
44 2y5n_A MYCG, P-450-like protei 100.0 6.4E-54 2.2E-58 416.5 33.1 357 62-501 34-417 (417)
45 1gwi_A CYP154C1, cytochrome P4 100.0 1.3E-54 4.4E-59 421.2 28.2 362 62-506 14-411 (411)
46 1z8o_A 6-deoxyerythronolide B 100.0 1.3E-53 4.6E-58 413.6 32.9 354 63-501 12-402 (404)
47 1q5d_A P450 epoxidase; cytochr 100.0 2.1E-54 7.3E-59 421.1 27.2 363 63-506 24-418 (419)
48 3buj_A CALO2; heme, iron, meta 100.0 5.9E-54 2E-58 415.4 30.0 357 64-505 12-397 (397)
49 3tyw_A Putative cytochrome P45 100.0 1.7E-53 5.8E-58 414.7 33.4 335 61-475 25-389 (417)
50 2dkk_A Cytochrome P450; CYP158 100.0 2.1E-54 7.3E-59 419.1 26.9 357 64-505 26-411 (411)
51 3dsk_A Cytochrome P450 74A, ch 100.0 1.8E-55 6.1E-60 440.0 19.1 406 43-475 25-472 (495)
52 2xkr_A CYP142, putative cytoch 100.0 1.6E-53 5.6E-58 412.4 32.3 357 64-506 17-396 (398)
53 3nc3_A Cytochrome P450 CYPX; c 100.0 1.3E-54 4.5E-59 424.5 24.4 367 64-503 52-440 (441)
54 3ivy_A Cytochrome P450 CYP125; 100.0 5E-54 1.7E-58 420.0 27.9 374 46-506 18-430 (433)
55 3lxh_A Cytochrome P450; heme, 100.0 1.4E-53 4.7E-58 415.9 30.7 379 46-507 12-420 (421)
56 2z3t_A Cytochrome P450; monoxy 100.0 6.4E-54 2.2E-58 417.9 28.2 360 64-504 19-416 (425)
57 3dan_A Cytochrome P450 74A2; A 100.0 7.2E-55 2.5E-59 433.4 21.3 405 44-475 7-454 (473)
58 2xbk_A PIMD protein; epoxidati 100.0 6.4E-53 2.2E-57 407.4 34.2 349 63-501 24-404 (404)
59 2uuq_A CYP130, cytochrome P450 100.0 3.7E-54 1.3E-58 418.1 24.2 357 64-505 24-414 (414)
60 2z36_A MOXA, cytochrome P450 t 100.0 3.1E-53 1.1E-57 411.5 30.3 368 47-502 8-408 (413)
61 3oft_A Cytochrome P450, CYP101 100.0 2.2E-53 7.6E-58 411.7 28.6 332 62-475 21-374 (396)
62 2wm5_A CYP124, putative cytoch 100.0 9E-53 3.1E-57 410.8 31.9 358 65-501 44-434 (435)
63 3oo3_A OXY protein; cytochrome 100.0 1.9E-52 6.6E-57 403.4 32.2 349 63-500 10-383 (384)
64 3mgx_A Putative P450 monooxyge 100.0 3.9E-53 1.3E-57 410.4 24.2 353 64-504 36-415 (415)
65 3tkt_A Cytochrome P450; aromat 100.0 4E-52 1.4E-56 408.4 30.8 364 67-503 47-449 (450)
66 3r9b_A Cytochrome P450 164A2; 100.0 1.4E-52 4.9E-57 409.0 26.6 363 62-505 26-418 (418)
67 1lfk_A OXYB, P450 monooxygenas 100.0 1.3E-52 4.5E-57 405.9 25.6 326 69-475 17-376 (398)
68 1n40_A P450 MT2, cytochrome P4 100.0 1.4E-52 4.8E-57 405.1 25.5 353 62-501 13-396 (396)
69 3rwl_A Cytochrome P450 alkane 100.0 7.6E-51 2.6E-55 396.0 31.3 358 64-503 37-426 (426)
70 2wiy_A XPLA-heme, cytochrome P 100.0 6.4E-50 2.2E-54 386.0 27.3 353 65-501 20-393 (394)
71 3p3o_A Cytochrome P450; monoox 100.0 5E-50 1.7E-54 389.6 22.5 365 53-503 23-415 (416)
72 1io7_A Cytochrome P450 CYP119; 100.0 1.6E-49 5.4E-54 380.1 25.3 336 67-505 1-368 (368)
73 3b4x_A 367AA long hypothetical 100.0 1.6E-49 5.5E-54 379.4 22.9 334 67-503 1-366 (367)
74 2rfb_A Cytochrome P450; heme, 100.0 3.8E-49 1.3E-53 373.7 24.2 300 76-475 2-324 (343)
75 4dnj_A Putative cytochrome P45 100.0 1.4E-47 4.9E-52 371.3 24.5 366 52-503 18-411 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 2.3E-43 7.9E-48 340.9 30.3 356 64-502 36-414 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 8.8E-42 3E-46 322.2 -0.9 310 48-475 36-361 (381)
78 2krb_A Eukaryotic translation 70.1 21 0.00072 24.0 7.2 50 56-105 5-65 (81)
79 1s79_A Lupus LA protein; RRM, 68.8 16 0.00054 26.3 6.5 56 54-111 13-76 (103)
80 2diu_A KIAA0430 protein; struc 65.6 6.2 0.00021 28.0 3.5 61 54-115 11-75 (96)
81 3lqv_A PRE-mRNA branch site pr 65.6 31 0.0011 25.1 7.9 56 48-105 4-65 (115)
82 2mss_A Protein (musashi1); RNA 59.7 30 0.001 22.6 6.3 54 56-111 3-65 (75)
83 1iqt_A AUF1, heterogeneous nuc 59.1 18 0.00061 23.8 5.0 51 56-108 3-62 (75)
84 3d2w_A TAR DNA-binding protein 58.2 30 0.001 23.8 6.2 53 49-103 8-64 (89)
85 3beg_B Splicing factor, argini 56.4 53 0.0018 23.9 7.7 59 54-114 18-79 (115)
86 2nlw_A Eukaryotic translation 53.0 59 0.002 23.1 7.4 59 54-112 17-87 (105)
87 1x4c_A Splicing factor, argini 47.1 75 0.0026 22.7 7.4 51 54-106 17-69 (108)
88 1sjq_A Polypyrimidine tract-bi 47.0 65 0.0022 23.2 6.5 52 52-105 16-70 (105)
89 2wbr_A GW182, gawky, LD47780P; 45.3 75 0.0026 22.1 6.6 50 54-105 9-61 (89)
90 4f25_A Polyadenylate-binding p 44.2 55 0.0019 23.8 6.0 50 55-106 8-64 (115)
91 1p27_B RNA-binding protein 8A; 43.8 83 0.0028 22.2 6.9 50 55-106 26-84 (106)
92 3s7r_A Heterogeneous nuclear r 43.2 36 0.0012 23.1 4.6 52 54-107 13-73 (87)
93 1whx_A Hypothetical protein ri 43.0 68 0.0023 23.1 6.3 59 55-115 13-75 (111)
94 1oo0_B CG8781-PA, drosophila Y 42.4 85 0.0029 22.4 6.8 49 55-105 29-86 (110)
95 1x4e_A RNA binding motif, sing 41.7 68 0.0023 21.5 5.9 50 54-105 7-65 (85)
96 4fxv_A ELAV-like protein 1; RN 41.7 64 0.0022 22.7 5.9 50 55-106 22-80 (99)
97 2cph_A RNA binding motif prote 40.3 95 0.0033 21.9 7.7 59 54-114 17-87 (107)
98 2dgu_A Heterogeneous nuclear r 39.2 78 0.0027 22.3 6.1 51 54-106 13-64 (103)
99 2hvz_A Splicing factor, argini 39.2 85 0.0029 21.9 6.3 58 56-115 4-66 (101)
100 1nu4_A U1A RNA binding domain; 38.7 94 0.0032 21.4 6.5 53 54-106 10-70 (97)
101 1whw_A Hypothetical protein ri 38.6 96 0.0033 21.5 7.0 50 54-105 10-68 (99)
102 2cqc_A Arginine/serine-rich sp 38.6 93 0.0032 21.3 6.7 56 49-106 12-76 (95)
103 3ex7_B RNA-binding protein 8A; 38.6 81 0.0028 23.2 6.3 60 54-115 24-93 (126)
104 3ns6_A Eukaryotic translation 38.3 58 0.002 22.9 5.2 52 54-105 8-72 (100)
105 2dnh_A Bruno-like 5, RNA bindi 38.2 68 0.0023 22.6 5.6 50 54-105 17-74 (105)
106 2ad9_A Polypyrimidine tract-bi 37.8 1.2E+02 0.0041 22.4 6.9 50 54-105 33-85 (119)
107 2cpf_A RNA binding motif prote 37.4 76 0.0026 22.0 5.7 51 54-106 7-69 (98)
108 2dgx_A KIAA0430 protein; RRM d 37.0 94 0.0032 21.5 6.1 50 54-105 11-70 (96)
109 1x4g_A Nucleolysin TIAR; struc 36.7 1.1E+02 0.0037 21.8 6.6 51 54-106 27-80 (109)
110 2jwn_A Embryonic polyadenylate 36.3 63 0.0022 23.8 5.4 54 56-111 40-102 (124)
111 2kxn_B Transformer-2 protein h 36.2 1.3E+02 0.0045 22.3 8.8 51 53-105 47-106 (129)
112 1sjr_A Polypyrimidine tract-bi 35.4 94 0.0032 24.6 6.3 49 55-105 49-102 (164)
113 3s8s_A Histone-lysine N-methyl 35.1 1.1E+02 0.0036 22.1 6.2 50 54-105 8-66 (110)
114 2cpi_A CCR4-NOT transcription 35.1 50 0.0017 23.8 4.5 58 54-113 17-90 (111)
115 2cqi_A Nucleolysin TIAR; RNA r 34.8 99 0.0034 21.6 6.0 50 54-105 17-73 (103)
116 3zzy_A Polypyrimidine tract-bi 34.6 77 0.0026 23.9 5.4 50 54-105 30-84 (130)
117 3md1_A Nuclear and cytoplasmic 34.5 98 0.0034 20.4 5.8 49 56-106 5-62 (83)
118 2dhg_A TRNA selenocysteine ass 34.5 1.2E+02 0.004 21.2 7.1 56 49-106 6-70 (104)
119 2cq1_A PTB-like protein L; RRM 34.4 1.2E+02 0.0042 21.4 6.9 51 53-105 16-69 (101)
120 2ywk_A Putative RNA-binding pr 34.0 84 0.0029 21.5 5.5 50 54-105 18-75 (95)
121 2dnr_A Synaptojanin-1; RRM dom 33.7 62 0.0021 22.6 4.3 46 66-111 27-73 (91)
122 2la4_A Nuclear and cytoplasmic 33.5 1.2E+02 0.004 21.1 6.2 50 54-105 29-81 (101)
123 2jvo_A Nucleolar protein 3; nu 33.4 1.1E+02 0.0039 21.8 6.2 50 55-106 34-84 (108)
124 1p1t_A Cleavage stimulation fa 33.1 1.1E+02 0.0039 21.3 6.2 49 55-105 11-68 (104)
125 1x4b_A Heterogeneous nuclear r 33.1 79 0.0027 22.8 5.4 55 55-111 30-93 (116)
126 1rk8_A CG8781-PA, CG8781-PA pr 32.9 1.1E+02 0.0038 23.9 6.5 49 55-105 75-132 (165)
127 2fy1_A RNA-binding motif prote 32.7 1E+02 0.0035 22.4 5.9 59 54-114 9-76 (116)
128 2err_A Ataxin-2-binding protei 32.2 71 0.0024 22.9 4.9 49 55-105 32-87 (109)
129 2d9p_A Polyadenylate-binding p 32.1 1.3E+02 0.0044 21.0 6.6 54 50-105 13-73 (103)
130 3bs9_A Nucleolysin TIA-1 isofo 32.1 1.1E+02 0.0038 20.4 5.7 51 54-106 8-67 (87)
131 2dnz_A Probable RNA-binding pr 32.1 1.2E+02 0.0041 20.7 8.1 59 54-114 7-75 (95)
132 2cq3_A RNA-binding protein 9; 31.7 1.3E+02 0.0045 21.0 7.6 51 54-106 17-74 (103)
133 2jvr_A Nucleolar protein 3; RN 31.5 1.3E+02 0.0043 21.8 6.1 51 54-106 30-86 (111)
134 3ucg_A Polyadenylate-binding p 31.4 87 0.003 21.1 5.1 52 56-109 10-70 (89)
135 1wex_A Hypothetical protein (r 31.0 1.4E+02 0.0049 21.2 6.9 51 53-105 16-69 (104)
136 1wf0_A TDP-43, TAR DNA-binding 30.9 66 0.0023 21.8 4.3 47 55-103 8-58 (88)
137 2rs2_A Musashi-1, RNA-binding 30.9 1.1E+02 0.0036 22.0 5.6 52 54-107 27-87 (109)
138 2a3j_A U1 small nuclear ribonu 30.8 80 0.0027 23.6 5.0 53 54-106 31-91 (127)
139 2cq4_A RNA binding motif prote 30.6 62 0.0021 23.4 4.4 51 56-108 29-88 (114)
140 1uaw_A Mouse-musashi-1; RNP-ty 30.4 92 0.0031 20.2 4.9 50 56-107 4-62 (77)
141 2dgv_A HnRNP M, heterogeneous 30.4 1.3E+02 0.0044 20.4 7.2 51 54-106 10-67 (92)
142 2e5h_A Zinc finger CCHC-type a 30.2 1.3E+02 0.0044 20.4 7.0 51 53-105 17-76 (94)
143 1x5s_A Cold-inducible RNA-bind 30.0 1.4E+02 0.0048 20.7 7.2 59 53-113 13-81 (102)
144 2cqg_A TDP-43, TAR DNA-binding 29.9 1.3E+02 0.0043 21.0 5.9 51 54-106 17-76 (103)
145 2e5i_A Heterogeneous nuclear r 29.9 1.5E+02 0.0051 22.1 6.3 48 56-105 29-80 (124)
146 2dgo_A Cytotoxic granule-assoc 29.9 1.2E+02 0.0041 21.7 5.9 51 54-106 17-76 (115)
147 2dnp_A RNA-binding protein 14; 29.8 1.3E+02 0.0044 20.3 7.3 51 53-105 10-61 (90)
148 4a8x_A RNA-binding protein wit 29.7 1.3E+02 0.0043 20.1 6.7 50 55-106 7-66 (88)
149 2dnq_A RNA-binding protein 4B; 29.7 1.3E+02 0.0045 20.3 7.0 50 54-105 10-60 (90)
150 1x4d_A Matrin 3; structural ge 29.6 1.5E+02 0.0052 21.0 6.3 56 49-105 12-70 (102)
151 1x4f_A Matrin 3; structural ge 29.5 1.4E+02 0.0048 21.7 6.0 52 53-105 26-80 (112)
152 2cpz_A CUG triplet repeat RNA- 29.4 1.1E+02 0.0039 21.9 5.7 51 54-106 27-86 (115)
153 2dis_A Unnamed protein product 29.3 1.5E+02 0.005 20.9 6.3 50 55-106 11-71 (109)
154 2d9o_A DNAJ (HSP40) homolog, s 29.2 1.5E+02 0.0052 20.9 6.4 40 67-106 30-73 (100)
155 2la6_A RNA-binding protein FUS 28.7 1.5E+02 0.005 20.5 7.7 51 53-105 14-81 (99)
156 2dnm_A SRP46 splicing factor; 28.5 1.5E+02 0.0051 20.6 6.7 57 54-112 15-81 (103)
157 2cpj_A Non-POU domain-containi 27.9 92 0.0031 21.6 4.8 50 54-105 17-69 (99)
158 2kt5_A RNA and export factor-b 27.6 1.8E+02 0.006 21.2 6.6 49 55-105 38-94 (124)
159 2dgt_A RNA-binding protein 30; 27.6 1.5E+02 0.005 20.2 7.1 50 54-105 12-62 (92)
160 1ufw_A Synaptojanin 2; RNP dom 27.4 1.1E+02 0.0036 21.7 4.6 48 65-112 35-83 (95)
161 2bz2_A Negative elongation fac 27.3 1.8E+02 0.0062 21.3 6.5 49 54-106 41-92 (121)
162 3mdf_A Peptidyl-prolyl CIS-tra 27.2 1.4E+02 0.0047 19.8 7.7 51 53-105 8-67 (85)
163 1x5p_A Negative elongation fac 27.1 1.5E+02 0.0053 20.3 7.2 49 54-106 17-68 (97)
164 2qfj_A FBP-interacting repress 27.0 2.1E+02 0.0072 23.2 7.7 49 55-105 31-88 (216)
165 2dgs_A DAZ-associated protein 27.0 1.6E+02 0.0054 20.3 8.4 59 54-114 12-79 (99)
166 2cqd_A RNA-binding region cont 26.9 1.6E+02 0.0056 21.0 6.2 52 54-107 19-79 (116)
167 2cqb_A Peptidyl-prolyl CIS-tra 26.9 1.6E+02 0.0055 20.4 6.8 53 51-105 11-72 (102)
168 2pe8_A Splicing factor 45; RRM 26.7 1.7E+02 0.0058 20.8 6.0 64 51-114 7-84 (105)
169 2do0_A HnRNP M, heterogeneous 26.7 1.3E+02 0.0045 21.4 5.6 50 54-105 17-74 (114)
170 1u6f_A Tcubp1, RNA-binding pro 26.5 1.3E+02 0.0045 22.5 5.8 50 55-106 45-103 (139)
171 3ulh_A THO complex subunit 4; 26.1 1.7E+02 0.0059 20.5 6.3 51 54-106 31-89 (107)
172 2cpd_A Apobec-1 stimulating pr 25.9 1.6E+02 0.0056 20.2 6.6 50 54-105 17-69 (99)
173 2do4_A Squamous cell carcinoma 25.8 1.7E+02 0.0057 20.2 7.3 51 54-106 19-77 (100)
174 2voo_A Lupus LA protein; RNA-b 25.8 1E+02 0.0034 25.1 5.2 50 56-107 113-170 (193)
175 3n9u_C Cleavage and polyadenyl 25.8 1.3E+02 0.0044 23.4 5.7 49 56-106 59-118 (156)
176 1wg5_A Heterogeneous nuclear r 25.7 1.7E+02 0.006 20.4 7.5 59 54-114 17-84 (104)
177 2khc_A Testis-specific RNP-typ 25.5 99 0.0034 22.4 4.7 50 55-106 43-101 (118)
178 2dh8_A DAZ-associated protein 25.3 91 0.0031 21.9 4.4 57 54-112 18-83 (105)
179 2x1f_A MRNA 3'-END-processing 25.1 1.7E+02 0.0057 20.0 7.0 49 55-105 5-62 (96)
180 2knc_A Integrin alpha-IIB; tra 25.0 1.3E+02 0.0043 18.6 4.6 6 9-14 3-8 (54)
181 2cjk_A Nuclear polyadenylated 25.0 1.6E+02 0.0054 22.7 6.2 56 55-112 90-154 (167)
182 2j76_E EIF-4B, EIF4B, eukaryot 24.9 1.5E+02 0.0051 20.6 5.5 53 56-111 23-85 (100)
183 2jrs_A RNA-binding protein 39; 24.6 1.9E+02 0.0065 20.5 7.4 50 54-105 28-86 (108)
184 3r27_A HnRNP L, heterogeneous 24.5 1.9E+02 0.0065 20.5 7.5 53 51-105 20-75 (100)
185 4f02_A Polyadenylate-binding p 24.5 1.5E+02 0.005 24.4 6.1 57 48-106 11-76 (213)
186 1wi8_A EIF-4B, eukaryotic tran 24.3 1.8E+02 0.0063 20.2 6.3 58 51-111 14-81 (104)
187 2div_A TRNA selenocysteine ass 24.0 1.8E+02 0.0061 20.0 6.5 54 50-105 7-70 (99)
188 1x5t_A Splicing factor 3B subu 23.6 1.3E+02 0.0045 20.5 4.9 50 54-105 7-66 (96)
189 1x5u_A Splicing factor 3B subu 23.3 1.9E+02 0.0066 20.1 8.4 58 54-113 17-84 (105)
190 3md3_A Nuclear and cytoplasmic 22.9 1.6E+02 0.0056 22.5 5.9 48 56-105 4-59 (166)
191 1h2v_Z 20 kDa nuclear CAP bind 22.6 1.7E+02 0.006 22.4 5.9 51 54-106 41-100 (156)
192 2kvi_A Nuclear polyadenylated 22.5 1.9E+02 0.0066 19.8 6.2 58 54-112 12-71 (96)
193 1l3k_A Heterogeneous nuclear r 22.2 1.5E+02 0.005 23.7 5.6 53 54-108 15-76 (196)
194 1why_A Hypothetical protein ri 21.9 2E+02 0.0067 19.7 7.0 50 54-105 19-71 (97)
195 2cq0_A Eukaryotic translation 21.7 1.3E+02 0.0044 21.0 4.6 50 54-105 17-75 (103)
196 1b7f_A Protein (SXL-lethal pro 21.7 2.4E+02 0.008 21.6 6.7 49 55-105 6-63 (168)
197 1x5o_A RNA binding motif, sing 21.3 1.6E+02 0.0055 21.0 5.2 50 54-105 27-84 (114)
198 3pgw_S U1-70K; protein-RNA com 21.2 2.1E+02 0.0071 26.9 7.0 52 53-106 103-163 (437)
199 2xnq_A Nuclear polyadenylated 21.1 2.1E+02 0.0072 19.7 5.8 50 55-105 25-75 (97)
200 1x4h_A RNA-binding protein 28; 20.9 2.2E+02 0.0077 20.0 8.4 51 54-106 17-76 (111)
201 3p5t_L Cleavage and polyadenyl 20.6 1.6E+02 0.0054 19.9 4.8 48 56-105 5-63 (90)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=7.9e-73 Score=565.44 Aligned_cols=442 Identities=23% Similarity=0.372 Sum_probs=358.7
Q ss_pred CCCCCCCCCCCceeeeccccC--CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh
Q 048184 44 NLLPPPGPKPWHLIVNLNLIG--QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK 121 (512)
Q Consensus 44 ~~~~ppgP~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~ 121 (512)
..+.||||+++|++||++.+. ++++..+.+|+++||+||++++|++++|+|+||+.+++++.+++..|..++......
T Consensus 6 ~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~ 85 (494)
T 3swz_A 6 GAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLD 85 (494)
T ss_dssp ------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHH
T ss_pred CCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 346799999999999999883 467899999999999999999999999999999999999998888999988765555
Q ss_pred hhccCCcccccCCCChhHHHHHHHHHhhcCCh--hHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHH
Q 048184 122 HANYNYLVMPGAPYGPHWRQTRKIYMTQLLSP--KSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFN 199 (512)
Q Consensus 122 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~ 199 (512)
....++.+++++.+|+.|+++||.+ .+.|+. ..+..+.+.+.++++.+++.+... .+..+|+..++..++
T Consensus 86 ~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~vd~~~~~~~~t 157 (494)
T 3swz_A 86 IASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATH-------NGQSIDISFPVFVAV 157 (494)
T ss_dssp HHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT-------TTEEECCHHHHHHHH
T ss_pred HhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc-------CCCcccHHHHHHHHH
Confidence 4444456777777899999999999 688864 446778999999999999998753 567899999999999
Q ss_pred HHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 200 LAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 200 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
+++++.++||.+++..+ .....+....+.+........+..++|++.+++ ....+++.+..+.+.+++..+++++
T Consensus 158 ~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (494)
T 3swz_A 158 TNVISLICFNTSYKNGD----PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENY 232 (494)
T ss_dssp HHHHHHHHHSCCCCTTC----THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcCCCCC----HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986543 122334444444444444455677889888764 3335667777888888888888887
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCc--------cccccccHHHHHHHH--------------------HHhcCHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDP--------TLEVKLERDHIKASM--------------------QLLKNPEVI 331 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~--------~~~~~l~~~~i~~~~--------------------~L~~~p~~~ 331 (512)
++.. ......|+++.++++..+. ..+..++++++..++ +|+.||++|
T Consensus 233 ~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q 307 (494)
T 3swz_A 233 KEKF-----RSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVK 307 (494)
T ss_dssp TTTC-----CTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHhh-----cccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHH
Confidence 7654 2344679999999764211 012357888876544 999999999
Q ss_pred HHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCC
Q 048184 332 QKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTL 411 (512)
Q Consensus 332 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~ 411 (512)
+|+++||+++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++
T Consensus 308 ~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~ 387 (494)
T 3swz_A 308 KKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKE 387 (494)
T ss_dssp HHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTT
T ss_pred HHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCccc
Confidence 99999999999988889999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcc
Q 048184 412 WEKPNEFCPERFVGKEIDV-VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGR 490 (512)
Q Consensus 412 ~~~p~~F~p~R~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 490 (512)
|+||++|+||||+++++.. ......|+|||.|+|.|+|++||++|++++++.||++|+|+++++.. .++.....+.+
T Consensus 388 ~~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~ 465 (494)
T 3swz_A 388 WHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ--LPSLEGIPKVV 465 (494)
T ss_dssp SSSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCC--CCCCSCEESSS
T ss_pred CCCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCC--CCCCCCcccee
Confidence 9999999999999865432 22456899999999999999999999999999999999999986532 22333344566
Q ss_pred cccCCCceeeeccCCC
Q 048184 491 TSRKNPLLVVPKPRLP 506 (512)
Q Consensus 491 ~~~~~~~~v~~~~R~~ 506 (512)
..|+ +++|++++|..
T Consensus 466 ~~p~-~~~v~~~~R~~ 480 (494)
T 3swz_A 466 FLID-SFKVKIKVRQA 480 (494)
T ss_dssp EECC-CCCEEEEECHH
T ss_pred ecCC-CcEEEEEEcCc
Confidence 6664 89999999953
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-73 Score=569.40 Aligned_cols=445 Identities=23% Similarity=0.408 Sum_probs=341.5
Q ss_pred CCCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh
Q 048184 44 NLLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA 123 (512)
Q Consensus 44 ~~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~ 123 (512)
+.+.||||+++|++||++.+..+++..+.+|+++||+||++++|+.++++|+||+.+++|+.++...|.+++........
T Consensus 7 ~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~ 86 (507)
T 3pm0_A 7 SKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVV 86 (507)
T ss_dssp ---------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHG
T ss_pred CCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhh
Confidence 34679999999999999999889999999999999999999999999999999999999998888889888765544433
Q ss_pred ccCCcccccCCCChhHHHHHHHHHhhcCChhH------HHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHH
Q 048184 124 NYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKS------LAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFM 197 (512)
Q Consensus 124 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~ 197 (512)
. ++.+++++.+|+.|+++|+.+ .+.|+... ++.+.+.+.++++++++.+..... ++..+|+.+++..
T Consensus 87 ~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~ 159 (507)
T 3pm0_A 87 S-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSA-----DGAFLDPRPLTVV 159 (507)
T ss_dssp G-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTG-----GGCCBCCHHHHHH
T ss_pred c-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcc-----cCCCcChHHHHHH
Confidence 2 345676777799999999998 57654333 234889999999999999987544 4678999999999
Q ss_pred HHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccccccc--chHHHHHHHHHHHHHHHHHH
Q 048184 198 FNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQ--GNIKRMKAVKKKIDKFYEHV 275 (512)
Q Consensus 198 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~--~~~~~~~~~~~~l~~~~~~~ 275 (512)
+++++++.++||.+++..++ ....+...+..+........+...+|++.+++.. ...+++.+..+.+.+++.+.
T Consensus 160 ~~~dvi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~ 235 (507)
T 3pm0_A 160 AVANVMSAVCFGCRYSHDDP----EFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDK 235 (507)
T ss_dssp HHHHHHHHHHTSCCCCTTCH----HHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCCCCCH----HHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876441 1223333334444433334455678888776432 13567778888999999999
Q ss_pred HHHHHHhcccccccCCCcccHHHHHhcccCCccc------cccccHHHHHHHH--------------------HHhcCHH
Q 048184 276 LHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTL------EVKLERDHIKASM--------------------QLLKNPE 329 (512)
Q Consensus 276 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~l~~~~i~~~~--------------------~L~~~p~ 329 (512)
++++++..+. +....|+++.++....+... +..++++++..++ +|++||+
T Consensus 236 i~~~~~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~ 311 (507)
T 3pm0_A 236 FLRHCESLRP----GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPD 311 (507)
T ss_dssp HHHHHHHCCT----TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHhcccc----ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHH
Confidence 9998876522 14467999999865432110 1247777766544 9999999
Q ss_pred HHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCC
Q 048184 330 VIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDP 409 (512)
Q Consensus 330 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~ 409 (512)
+|+||++||+++++.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++.+++|+||
T Consensus 312 ~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~ 391 (507)
T 3pm0_A 312 VQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDP 391 (507)
T ss_dssp HHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCT
T ss_pred HHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCc
Confidence 99999999999999888899999999999999999999999999987789999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc-CccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccC
Q 048184 410 TLWEKPNEFCPERFVGKEIDVVG-HNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFG 488 (512)
Q Consensus 410 ~~~~~p~~F~p~R~l~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~ 488 (512)
++|+||++|+||||+++++.... .+..|+|||+|+|.|||++||++|++++++.||++|||++.++. +.+.....+
T Consensus 392 ~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~ 468 (507)
T 3pm0_A 392 LKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE---PAKMNFSYG 468 (507)
T ss_dssp TTCSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTC---CSCCCEEES
T ss_pred ccCCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCC---CCCCCCCCC
Confidence 99999999999999986543211 24689999999999999999999999999999999999998763 334444456
Q ss_pred cccccCCCceeeeccCCCC
Q 048184 489 GRTSRKNPLLVVPKPRLPL 507 (512)
Q Consensus 489 ~~~~~~~~~~v~~~~R~~~ 507 (512)
+++.|+ +++|++++|...
T Consensus 469 ~~~~p~-~~~v~~~~R~~~ 486 (507)
T 3pm0_A 469 LTIKPK-SFKVNVTLRESM 486 (507)
T ss_dssp SSEEEC-SCCEEEEESSCC
T ss_pred ccccCC-CcEEEEEEcccc
Confidence 677776 689999999753
No 3
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=1.5e-72 Score=561.94 Aligned_cols=439 Identities=23% Similarity=0.350 Sum_probs=340.6
Q ss_pred CCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184 46 LPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (512)
+.||||+++|++||++++ ..+++..+.+|++||||||++++|++++|+|+||+++++|+.+++..|..|+.........
T Consensus 10 kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~ 89 (479)
T 3tbg_A 10 KLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILG 89 (479)
T ss_dssp CCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGT
T ss_pred CCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHhc
Confidence 689999999999999998 5788999999999999999999999999999999999999998888898887665555443
Q ss_pred cC--CcccccCCCChhHHHHHHHHHhhcCChhHHHH--hHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184 125 YN--YLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQ--FEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL 200 (512)
Q Consensus 125 ~~--~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~ 200 (512)
++ +.+++++.+|+.|+++|+.+ .+.|+...+.. +...+......+...+... .+..+|+.+++..+++
T Consensus 90 ~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~ 161 (479)
T 3tbg_A 90 FGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANH-------SGRPFRPNGLLDKAVS 161 (479)
T ss_dssp CBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT-------TTCCBCTHHHHHHHHH
T ss_pred cCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhc-------cCCcccHHHHHHHHHH
Confidence 22 34567777899999999998 68776655543 4566666666666666543 5678999999999999
Q ss_pred HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCC--ccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 048184 201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLD--IGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHE 278 (512)
Q Consensus 201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 278 (512)
++++.++||.+++..++ ....+............... ....+|+..++ .....+.....+...+.+.+.+.+
T Consensus 162 ~~~~~~~fg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (479)
T 3tbg_A 162 NVIASLTCGRRFEYDDP----RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTE 235 (479)
T ss_dssp HHHHHHHHSCCCCTTCH----HHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCcccccch----hhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987651 11222222222222221110 11122332222 222345555666777777777777
Q ss_pred HHHhcccccccCCCcccHHHHHhcccC--CccccccccHHHHHHHH--------------------HHhcCHHHHHHHHH
Q 048184 279 HERHGKRKLFKEHGTNDIVDVLLQLAD--DPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATD 336 (512)
Q Consensus 279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~ 336 (512)
+...... .....|+++.++.... .......++++++..++ +|++||++|+||++
T Consensus 236 ~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~ 311 (479)
T 3tbg_A 236 HRMTWDP----AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQ 311 (479)
T ss_dssp HHHHCCT----TSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHhhhc----ccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHH
Confidence 7665532 2344566655543321 11124468888887655 99999999999999
Q ss_pred HHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCC
Q 048184 337 ELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPN 416 (512)
Q Consensus 337 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~ 416 (512)
||+++++.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++|+||+
T Consensus 312 Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~ 391 (479)
T 3tbg_A 312 EIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPF 391 (479)
T ss_dssp HHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTT
T ss_pred HHHHHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCcc
Confidence 99999998888999999999999999999999999999988677889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCC
Q 048184 417 EFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNP 496 (512)
Q Consensus 417 ~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (512)
+|+||||++++++ ...+..|+|||+|+|.|+|++||++|+++++|.||++|||+++++. +.+......++++.|+ +
T Consensus 392 ~F~PeRfl~~~~~-~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~P~-~ 467 (479)
T 3tbg_A 392 RFHPEHFLDAQGH-FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ--PRPSHHGVFAFLVSPS-P 467 (479)
T ss_dssp SCCGGGGBCTTCC-BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTS--CCCCSCEEESSSEEEC-C
T ss_pred ccCccccCCCCcc-cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCC--CCccccccceeeecCC-C
Confidence 9999999987654 2356789999999999999999999999999999999999998774 2233444557777775 8
Q ss_pred ceeeeccCCC
Q 048184 497 LLVVPKPRLP 506 (512)
Q Consensus 497 ~~v~~~~R~~ 506 (512)
++|+++||++
T Consensus 468 ~~v~~~pRs~ 477 (479)
T 3tbg_A 468 YELCAVPRHH 477 (479)
T ss_dssp CCBEEEEC--
T ss_pred eEEEEEECCC
Confidence 9999999986
No 4
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=7e-71 Score=548.26 Aligned_cols=434 Identities=22% Similarity=0.341 Sum_probs=345.2
Q ss_pred CCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184 46 LPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (512)
+.||||+++|++||++.+ .++++..+.+++++|||||++++++.++++|+||+.+++|+.++...|.+++.........
T Consensus 10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~ 89 (476)
T 1po5_A 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIF 89 (476)
T ss_dssp CCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCC
T ss_pred CCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhc
Confidence 569999999999999998 6889999999999999999999999999999999999999977666787765433222221
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChh--HHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPK--SLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI 202 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~ 202 (512)
.+.+++++ +|+.|+++||.+ .+.|+.. .++.+.+.+.++++++++.+... .++++|+.+++..+++++
T Consensus 90 -~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~~d~~~~~~~~~~~v 159 (476)
T 1po5_A 90 -QGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKS-------KGALLDNTLLFHSITSNI 159 (476)
T ss_dssp -SSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT-------TTCCBCCHHHHHHHHHHH
T ss_pred -CCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc-------CCCccCHHHHHHHHHHHH
Confidence 23455555 599999999998 6888776 45778999999999999999754 346799999999999999
Q ss_pred HHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCC-----Cccccccc-cccccccchHHHHHHHHHHHHHHHHHHH
Q 048184 203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVL-----DIGDAIPW-LAFLDLQGNIKRMKAVKKKIDKFYEHVL 276 (512)
Q Consensus 203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~P~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i 276 (512)
++.++||.+++..+ ..+....+.+....... .+...+|+ +.+++ ...++..+..+.+.+++.++|
T Consensus 160 i~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~~i 230 (476)
T 1po5_A 160 ICSIVFGKRFDYKD-------PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQSV 230 (476)
T ss_dssp HHHHHHSSCCCTTC-------HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCC-------HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987543 33444433333222111 11224565 33332 223567778888999999999
Q ss_pred HHHHHhcccccccCCCcccHHHHHhcccCC--ccccccccHHHHHHHH--------------------HHhcCHHHHHHH
Q 048184 277 HEHERHGKRKLFKEHGTNDIVDVLLQLADD--PTLEVKLERDHIKASM--------------------QLLKNPEVIQKA 334 (512)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l 334 (512)
+++++..+ .....|+++.|+....+ ...+..++++++..++ +|++||++|+||
T Consensus 231 ~~r~~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l 305 (476)
T 1po5_A 231 EKHRATLD-----PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERV 305 (476)
T ss_dssp HHHHTTCC-----TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHhcC-----CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHH
Confidence 99886541 22346899998864321 1112357888887654 999999999999
Q ss_pred HHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184 335 TDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK 414 (512)
Q Consensus 335 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~ 414 (512)
++||+++++.++.++.+++++||||+|||+|+||++|+++...+|++.+|++++||.|||||.|.++.+++||||++|+|
T Consensus 306 ~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~d 385 (476)
T 1po5_A 306 QKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFET 385 (476)
T ss_dssp HHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSS
T ss_pred HHHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCC
Confidence 99999999987779999999999999999999999999997677999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCccc-ccCccccc
Q 048184 415 PNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEE-RFGGRTSR 493 (512)
Q Consensus 415 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~ 493 (512)
|++|+||||+++++... .+..|+|||+|+|.|+|++||++|++++++.||++|++++.++. +.++... ..++++.|
T Consensus 386 p~~F~PeR~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p 462 (476)
T 1po5_A 386 PNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPP--EDIDLTPRESGVGNVP 462 (476)
T ss_dssp TTSCCGGGGBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCG--GGCCCCCCSTTSSCCC
T ss_pred ccccCchhhCCCCCCcc-CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCC--CCCCccCCcCceeecC
Confidence 99999999997543322 45689999999999999999999999999999999999998763 1122223 45677777
Q ss_pred CCCceeeeccCCCC
Q 048184 494 KNPLLVVPKPRLPL 507 (512)
Q Consensus 494 ~~~~~v~~~~R~~~ 507 (512)
.+++|++++|++.
T Consensus 463 -~~~~v~~~~R~~~ 475 (476)
T 1po5_A 463 -PSYQIRFLARHHH 475 (476)
T ss_dssp -CCCCBEEEECC--
T ss_pred -cceEEEEEecCCC
Confidence 6999999999753
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=1.2e-70 Score=548.79 Aligned_cols=428 Identities=20% Similarity=0.313 Sum_probs=347.4
Q ss_pred CCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184 46 LPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW 120 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~ 120 (512)
+.+|||+++|++||++.+ .++++..+.+|+++|||||++++|+.++|+++||+.+++|+.++ ..|.+++....+
T Consensus 24 ~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~~~ 102 (482)
T 3k9v_A 24 TDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIKPW 102 (482)
T ss_dssp GGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCHHH
T ss_pred CCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCchHH
Confidence 459999999999999887 24678999999999999999999999999999999999999874 578777654322
Q ss_pred ---hhhccCCcccccCCCChhHHHHHHHHHhhc-CChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH
Q 048184 121 ---KHANYNYLVMPGAPYGPHWRQTRKIYMTQL-LSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF 196 (512)
Q Consensus 121 ---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~-f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~ 196 (512)
......+.++++. +|+.|+++||.+ .+. ++...++.+.+.+.++++.+++.+...... +++++|+.+++.
T Consensus 103 ~~~~~~~~~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~----~g~~vd~~~~~~ 176 (482)
T 3k9v_A 103 KAYRDHRNEAYGLMIL-EGQEWQRVRSAF-QKKLMKPVEIMKLDKKINEVLADFLERMDELCDE----RGRIPDLYSELN 176 (482)
T ss_dssp HHHHHHHTCCCCTTTC-CHHHHHHHHHHH-HHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCT----TSCCTTHHHHHH
T ss_pred HHHHHhcCCCCCceeC-CCchHHHHHHHh-hHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCHHHHHH
Confidence 1112224455555 599999999999 566 588889999999999999999999876432 356899999999
Q ss_pred HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccc--ccccccccchHHHHHHHHHHHHHHHHH
Q 048184 197 MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIP--WLAFLDLQGNIKRMKAVKKKIDKFYEH 274 (512)
Q Consensus 197 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~~~~~~~~~~~~~~~~~l~~~~~~ 274 (512)
.+++|+++.++||.+++..++........+...+..+...... ...+| +..++ +....++..+..+.+.+++.+
T Consensus 177 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 252 (482)
T 3k9v_A 177 KWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRL-NTKVWQAHTLAWDTIFKSVKP 252 (482)
T ss_dssp HHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHH-TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhc-CCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999765433333446677777666554322 22334 22222 223345666777888888899
Q ss_pred HHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHH
Q 048184 275 VLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKA 334 (512)
Q Consensus 275 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l 334 (512)
+++++++... .....|++..++... .++++++..++ +|++||++|+|+
T Consensus 253 ~i~~r~~~~~-----~~~~~d~l~~ll~~~-------~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl 320 (482)
T 3k9v_A 253 CIDNRLQRYS-----QQPGADFLCDIYQQD-------HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRL 320 (482)
T ss_dssp HHHHHHHHTT-----TCTTSCHHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHhc-----cCCchHHHHHHHhcc-------CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHH
Confidence 9998886542 233467888877642 46677766554 999999999999
Q ss_pred HHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184 335 TDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK 414 (512)
Q Consensus 335 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~ 414 (512)
++||+++++.++.++.+++++||||+|||+||||++|+++.. +|++.+|++++||.|||||.|.++.+++|+||++|+|
T Consensus 321 ~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~ 399 (482)
T 3k9v_A 321 LQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT-TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFED 399 (482)
T ss_dssp HHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE-EEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSS
T ss_pred HHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc-ccccCCceeeCCEEECCCCEEEEccccccCCCccCCC
Confidence 999999999888899999999999999999999999999984 6999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC
Q 048184 415 PNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK 494 (512)
Q Consensus 415 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (512)
|++|+||||++++.. ..+..|+|||.|+|.|+|++||++|++++++.|+++||+++.++. +.+. ....++.|+
T Consensus 400 p~~F~PeRfl~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~p~ 472 (482)
T 3k9v_A 400 SHKFRPERWLQKEKK--INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE---PVEM--LHLGILVPS 472 (482)
T ss_dssp TTSCCGGGGTCTTSC--CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC---CCCE--EESSSEEES
T ss_pred cCccCccccCCCCCC--CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC---Cccc--ccceeecCC
Confidence 999999999986542 456789999999999999999999999999999999999987663 3333 345678999
Q ss_pred CCceeeeccC
Q 048184 495 NPLLVVPKPR 504 (512)
Q Consensus 495 ~~~~v~~~~R 504 (512)
.+++|++++|
T Consensus 473 ~~~~~~~~~R 482 (482)
T 3k9v_A 473 RELPIAFRPR 482 (482)
T ss_dssp SSCCEEEEEC
T ss_pred CCcceEEeeC
Confidence 9999999987
No 6
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=8.4e-71 Score=548.72 Aligned_cols=438 Identities=24% Similarity=0.348 Sum_probs=347.5
Q ss_pred CCCCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh
Q 048184 44 NLLPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH 122 (512)
Q Consensus 44 ~~~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (512)
+.+.||||+++|++||++++ ..+++..+.+|+++||+||++++|++++++|+||+++++|+.++...|.+++.......
T Consensus 8 ~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~ 87 (476)
T 3e6i_A 8 KGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHA 87 (476)
T ss_dssp --CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGGG
T ss_pred CCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhhe
Confidence 34679999999999999998 67889999999999999999999999999999999999999988778887765544433
Q ss_pred hccCCcccccCCCChhHHHHHHHHHhhcCChhHH--HHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184 123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSL--AQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL 200 (512)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~ 200 (512)
.. ++ ++++.+ |+.|+++|+.. .+.|+...+ ..+++.+.++++.+++.+... .++++|+.+++..+++
T Consensus 88 ~~-~~-~l~~~~-g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~~d~~~~~~~~~~ 156 (476)
T 3e6i_A 88 HR-DR-GIIFNN-GPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKT-------QGQPFDPTFLIGCAPC 156 (476)
T ss_dssp GT-TS-SSTTCC-STTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT-------TTSCBCTHHHHTHHHH
T ss_pred ec-CC-CEEecC-CcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh-------CCCCcChHHHHHHHHH
Confidence 32 23 555554 99999999987 566654433 346789999999999998754 4568999999999999
Q ss_pred HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCC--Ccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHH
Q 048184 201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVL--DIGDAIP-WLAFLDLQGNIKRMKAVKKKIDKFYEHVLH 277 (512)
Q Consensus 201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 277 (512)
++++.++||.+++..++ ....+...+...+...... .+...+| ++.+++ ...++..+..+.+.+++.+.++
T Consensus 157 dvi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~ 230 (476)
T 3e6i_A 157 NVIADILFRKHFDYNDE----KFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVK 230 (476)
T ss_dssp HHHHHHHHSCCCCTTCH----HHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCH----HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999976541 1223333343333322211 1223455 444443 2346677788899999999999
Q ss_pred HHHHhcccccccCCCcccHHHHHhcccCCcc--ccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184 278 EHERHGKRKLFKEHGTNDIVDVLLQLADDPT--LEVKLERDHIKASM--------------------QLLKNPEVIQKAT 335 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~ 335 (512)
++++..+ .....|+++.++....++. .+..++++++..++ +|++||++|+|++
T Consensus 231 ~~~~~~~-----~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~ 305 (476)
T 3e6i_A 231 EHHQSLD-----PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLH 305 (476)
T ss_dssp HHHHTCC-----TTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHhhcCC-----CCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9887652 2335689998887543321 13358888887654 9999999999999
Q ss_pred HHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCC
Q 048184 336 DELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKP 415 (512)
Q Consensus 336 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p 415 (512)
+||+++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++|+||
T Consensus 306 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p 385 (476)
T 3e6i_A 306 EEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDP 385 (476)
T ss_dssp HHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSST
T ss_pred HHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCc
Confidence 99999999888899999999999999999999999999987779999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccc-cCcccccC
Q 048184 416 NEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEER-FGGRTSRK 494 (512)
Q Consensus 416 ~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~ 494 (512)
++|+||||+++++.. ..+..|+|||+|+|.|+|++||++|++++++.|+++|||++..+. ...+.... .|.+..|+
T Consensus 386 ~~F~PeR~l~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p~ 462 (476)
T 3e6i_A 386 EKFKPEHFLNENGKF-KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP--KDIDLSPIHIGFGCIPP 462 (476)
T ss_dssp TSCCGGGGBCTTSSB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCT--TTCCCSCSEESSSEECC
T ss_pred cccCchhhcCCCCCc-cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCC--CCCCCCcccCccccCCC
Confidence 999999999865432 345689999999999999999999999999999999999986432 23333332 46666665
Q ss_pred CCceeeeccCCCC
Q 048184 495 NPLLVVPKPRLPL 507 (512)
Q Consensus 495 ~~~~v~~~~R~~~ 507 (512)
+++|+++||++.
T Consensus 463 -~~~~~~~~R~~~ 474 (476)
T 3e6i_A 463 -RYKLCVIPRSHH 474 (476)
T ss_dssp -CCCEEEEECC--
T ss_pred -CeEEEEEecccc
Confidence 899999999864
No 7
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=1.4e-71 Score=557.09 Aligned_cols=428 Identities=27% Similarity=0.403 Sum_probs=339.5
Q ss_pred CCCCCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh
Q 048184 43 INLLPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK 121 (512)
Q Consensus 43 ~~~~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~ 121 (512)
.+.+.||||++ ++++ .++++..+.+|+++|||||++++|+.++++|+||+.+++|+.++...|.+++......
T Consensus 26 ~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~ 99 (496)
T 3qz1_A 26 RNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYK 99 (496)
T ss_dssp ---CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTT
T ss_pred cCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHH
Confidence 34478999986 4455 6789999999999999999999999999999999999999998878888887655443
Q ss_pred hhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHH
Q 048184 122 HANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLA 201 (512)
Q Consensus 122 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~ 201 (512)
....+..+++++++|+.|+++||.+ .+.|+.+.++.+.+.+.++++++++.+... .++++|+.+++..+++|
T Consensus 100 ~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~vd~~~~~~~~~~d 171 (496)
T 3qz1_A 100 LVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQ-------AGAPVTIQKEFSLLTCS 171 (496)
T ss_dssp TSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTT-------CSCCCHHHHHHTHHHHH
T ss_pred HhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhc-------CCCccCHHHHHHHHHHH
Confidence 3333333676676699999999999 799987777789999999999999999762 46789999999999999
Q ss_pred HHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCC--CCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 202 IMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGV--LDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 202 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
+++.++||. ..+ .....+...+..+...... ..+...+|++.+++. +..+++.+..+.+.+++.++++++
T Consensus 172 vi~~~~fG~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~ 243 (496)
T 3qz1_A 172 IICYLTFGN---KED----TLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRH 243 (496)
T ss_dssp HTTTTSTTC---CCH----HHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC---CCC----hHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 111 0113333333333322222 223456787777643 335678888899999999999999
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCcc---ccccccHHHHHHHH--------------------HHhcCHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDPT---LEVKLERDHIKASM--------------------QLLKNPEVIQKATD 336 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~ 336 (512)
++.. +.....|+++.+++...+.. ....++++++..++ +|++||++|+|+++
T Consensus 244 ~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~ 318 (496)
T 3qz1_A 244 KESM-----VAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQE 318 (496)
T ss_dssp HHSC-----CSSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred Hhhc-----cCCCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 8775 23456789999998765431 11267888876654 99999999999999
Q ss_pred HHHHHhcC----CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCC
Q 048184 337 ELDRVIGR----NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLW 412 (512)
Q Consensus 337 Ei~~~~~~----~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~ 412 (512)
||+++++. ++.+ .+++++||||+|||+|+||++|+++...+|++.+|++++||.|||||.|.++.+++|+||++|
T Consensus 319 Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~ 397 (496)
T 3qz1_A 319 ELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW 397 (496)
T ss_dssp HHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTS
T ss_pred HHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhc
Confidence 99999986 5556 899999999999999999999999987789999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccc--cCcc
Q 048184 413 EKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEER--FGGR 490 (512)
Q Consensus 413 ~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~--~~~~ 490 (512)
+||++|+||||++++ ....++|||+|+|.|+|++||++|++++++.|+++|+|++.++.. .++.... .+++
T Consensus 398 ~dp~~F~PeR~l~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~ 470 (496)
T 3qz1_A 398 EQPHEFRPDRFLEPG-----ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGA--LPSLQPDPYCGVN 470 (496)
T ss_dssp SSTTSCCCCCCC--------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCC--CCCSCCSCCCSSC
T ss_pred CCcccCCcccccCCC-----CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCC--CCCCCcccCcceE
Confidence 999999999999754 123899999999999999999999999999999999999986532 2222222 4677
Q ss_pred cccCCCceeeeccCCC
Q 048184 491 TSRKNPLLVVPKPRLP 506 (512)
Q Consensus 491 ~~~~~~~~v~~~~R~~ 506 (512)
..|+ +++|++++|+.
T Consensus 471 ~~~~-~~~v~~~~R~~ 485 (496)
T 3qz1_A 471 LKVQ-PFQVRLQPRGV 485 (496)
T ss_dssp CCCC-CCCCCCCCC--
T ss_pred ecCC-ceEEEEEEecc
Confidence 7776 99999999975
No 8
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.5e-71 Score=550.98 Aligned_cols=438 Identities=25% Similarity=0.411 Sum_probs=349.4
Q ss_pred CCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccC
Q 048184 47 PPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYN 126 (512)
Q Consensus 47 ~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (512)
.+|||+++|++||++.+.++++..+.+|+++|||||++++|+.++++++||+.+++|+.++...|.+++........ .+
T Consensus 17 ~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~-~~ 95 (495)
T 2hi4_A 17 SPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI-TD 95 (495)
T ss_dssp CCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS-TT
T ss_pred CCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh-cC
Confidence 35999999999999888778999999999999999999999999999999999999998776778877654332222 23
Q ss_pred CcccccC-CCChhHHHHHHHHHhhcCC---hhHH---H---HhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH
Q 048184 127 YLVMPGA-PYGPHWRQTRKIYMTQLLS---PKSL---A---QFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF 196 (512)
Q Consensus 127 ~~~~~~~-~~g~~w~~~R~~~~~~~f~---~~~~---~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~ 196 (512)
+.+++++ ++|+.|+++|+.+ .+.|+ ...+ + .+++.+.++++++++.+..... +++++|+.+++.
T Consensus 96 ~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~-----~~~~~d~~~~~~ 169 (495)
T 2hi4_A 96 GQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMA-----GPGHFDPYNQVV 169 (495)
T ss_dssp SCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHH-----TTSCBCHHHHHH
T ss_pred CCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhcc-----CCCccchHHHHH
Confidence 4566666 4699999999999 67754 3322 2 6899999999999999986433 456899999999
Q ss_pred HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 048184 197 MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVL 276 (512)
Q Consensus 197 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 276 (512)
.+++|+++.++||.+++..+ .....+...++.+............+|++.+++ ....++..+..+.+.+++.++|
T Consensus 170 ~~~~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i 244 (495)
T 2hi4_A 170 VSVANVIGAMCFGQHFPESS----DEMLSLVKNTHEFVETASSGNPLDFFPILRYLP-NPALQRFKAFNQRFLWFLQKTV 244 (495)
T ss_dssp HHHHHHHHHHHHGGGSCTTC----HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcC-chHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986433 112233333445544333333455678876653 2334667788889999999999
Q ss_pred HHHHHhcccccccCCCcccHHHHHhcccCC--ccccccccHHHHHHHH--------------------HHhcCHHHHHHH
Q 048184 277 HEHERHGKRKLFKEHGTNDIVDVLLQLADD--PTLEVKLERDHIKASM--------------------QLLKNPEVIQKA 334 (512)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l 334 (512)
+++++..+ .....|+++.+++...+ ...+..++++++..++ +|++||++|+|+
T Consensus 245 ~~r~~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl 319 (495)
T 2hi4_A 245 QEHYQDFD-----KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKI 319 (495)
T ss_dssp HHHHHTCC-----TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHhhc-----ccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHH
Confidence 99887641 23357999999864321 1112357888876544 999999999999
Q ss_pred HHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184 335 TDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK 414 (512)
Q Consensus 335 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~ 414 (512)
++||+++++.++.++.+++++||||+|||+|+||++|+++...+|++.+|++++||.|||||.|.++.+++||||++|+|
T Consensus 320 ~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~d 399 (495)
T 2hi4_A 320 QKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWED 399 (495)
T ss_dssp HHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSS
T ss_pred HHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCC
Confidence 99999999987789999999999999999999999999998777999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCc--ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccc
Q 048184 415 PNEFCPERFVGKEIDV--VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTS 492 (512)
Q Consensus 415 p~~F~p~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 492 (512)
|++|+||||+++++.. ...+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++. .++.....+++..
T Consensus 400 P~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~ 476 (495)
T 2hi4_A 400 PSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV---KVDLTPIYGLTMK 476 (495)
T ss_dssp TTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTC---CCCCCCBCSSSCB
T ss_pred cCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCC---CCCccccCCceec
Confidence 9999999999754321 1245689999999999999999999999999999999999998663 2333344577777
Q ss_pred cCCCc-eeeeccCCC
Q 048184 493 RKNPL-LVVPKPRLP 506 (512)
Q Consensus 493 ~~~~~-~v~~~~R~~ 506 (512)
|. ++ +|+++ |..
T Consensus 477 p~-~~~~v~~~-R~~ 489 (495)
T 2hi4_A 477 HA-RCEHVQAR-RFS 489 (495)
T ss_dssp CC-CCCCBEEE-CCC
T ss_pred CC-CcceEEEE-Ecc
Confidence 77 55 89999 854
No 9
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=3.7e-71 Score=555.06 Aligned_cols=428 Identities=21% Similarity=0.228 Sum_probs=341.0
Q ss_pred CCCCCCCCCCceeeeccccC----CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184 45 LLPPPGPKPWHLIVNLNLIG----QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW 120 (512)
Q Consensus 45 ~~~ppgP~~~p~lG~~~~~~----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~ 120 (512)
.+.||||+++|++||++++. ...+..+.+|+++|||||++++|+.++|+|+||+.++++++++ .|..++.....
T Consensus 44 ~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~ 121 (503)
T 3s79_A 44 TSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLG 121 (503)
T ss_dssp -CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHH
T ss_pred cCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhh
Confidence 36799999999999998873 2455688999999999999999999999999999999999643 57766543222
Q ss_pred -hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHH
Q 048184 121 -KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFN 199 (512)
Q Consensus 121 -~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~ 199 (512)
......+.++++..+|+.|+++||.+ .+.|+...++.+.+.+.++++++++.+....+ .++.+|+.+++..++
T Consensus 122 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~-----~~~~vdl~~~~~~~~ 195 (503)
T 3s79_A 122 LQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTN-----ESGYVDVLTLLRRVM 195 (503)
T ss_dssp HHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBC-----TTSCBCHHHHHHHHH
T ss_pred hhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEcHHHHHHHHH
Confidence 22334456777777799999999999 69999999999999999999999988866433 456899999999999
Q ss_pred HHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 200 LAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 200 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
+++++.++||.+++..+ ....+...++.+...... ...++.+ .+..++..+..+.+.+++.++++++
T Consensus 196 ~~vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~ 262 (503)
T 3s79_A 196 LDTSNTLFLRIPLDESA-----IVVKIQGYFDAWQALLIK---PDIFFKI-----SWLYKKYEKSVKDLKDAIEVLIAEK 262 (503)
T ss_dssp HHHHHHHHTCCCCCHHH-----HHHHHHHHHHHHHHHTTC---CHHHHHS-----GGGTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcccCchh-----HHHHHHHHHHHHHHHhcC---cHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999885321 123333333333322111 1111111 1223567778889999999999998
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELD 339 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~ 339 (512)
++..+.. .......|+++.++++..++ .++++++...+ +|+.||++|+|+++||+
T Consensus 263 ~~~~~~~-~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~ 337 (503)
T 3s79_A 263 RRRISTE-EKLEECMDFATELILAEKRG----DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQ 337 (503)
T ss_dssp HHHHHTC-TTTTTTCCHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHhhcc-cccchHHHHHHHHHHhcccC----CCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 8765321 01123459999999875432 57888876654 99999999999999999
Q ss_pred HHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCC
Q 048184 340 RVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFC 419 (512)
Q Consensus 340 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~ 419 (512)
++++ ++.++.+++++||||+|||+|+||++|+++... |.+.+|++++||.|||||.|.++.+++|+| ++|+||++|+
T Consensus 338 ~v~~-~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~ 414 (503)
T 3s79_A 338 TVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFT 414 (503)
T ss_dssp HHTT-TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEE-EECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCC
T ss_pred HHhC-CCCCCHHHHhcCHHHHHHHHhhhccCCCccccc-ccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCC
Confidence 9999 567999999999999999999999999999876 999999999999999999999999999999 9999999999
Q ss_pred CCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCC---
Q 048184 420 PERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNP--- 496 (512)
Q Consensus 420 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 496 (512)
||||+++. ....|+|||+|+|.|||++||.+|++++++.|+++|||+++++...+ +.....+.+.+|...
T Consensus 415 PeRf~~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~ 487 (503)
T 3s79_A 415 LENFAKNV-----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVE--SIQKIHDLSLHPDETKNM 487 (503)
T ss_dssp GGGGSSCC-----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTT--TSCEEESSSEEECTTSCC
T ss_pred hhhcCCCC-----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCcc--ccccccceeecCCCccce
Confidence 99998642 44589999999999999999999999999999999999998775222 333455777888765
Q ss_pred ceeeeccCCCCC
Q 048184 497 LLVVPKPRLPLD 508 (512)
Q Consensus 497 ~~v~~~~R~~~~ 508 (512)
++|+++||++.+
T Consensus 488 ~~v~~~~R~~~~ 499 (503)
T 3s79_A 488 LEMIFTPRNSDR 499 (503)
T ss_dssp CCEEEEECC---
T ss_pred eeEEeccCCchh
Confidence 999999998765
No 10
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=6.6e-71 Score=548.42 Aligned_cols=436 Identities=20% Similarity=0.319 Sum_probs=348.0
Q ss_pred CCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184 46 LPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (512)
+.||||+++|++||++.+ .++++..+.+++++|||||++++++.++++|+||+.+++|+.++...|.+++.........
T Consensus 10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~ 89 (476)
T 2fdv_A 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89 (476)
T ss_dssp BCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHH
T ss_pred CCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhc
Confidence 469999999999999998 6788999999999999999999999999999999999999976666787765433222222
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChhHH--HHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSL--AQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI 202 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~ 202 (512)
.+.+++++ +|+.|+++|+.+ .+.|+...+ +.+.+.+.++++++++.+... .++++|+.+++..+++++
T Consensus 90 -~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~vd~~~~~~~~~~~v 159 (476)
T 2fdv_A 90 -KGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGT-------GGANIDPTFFLSRTVSNV 159 (476)
T ss_dssp -TTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT-------TTCCBCCHHHHHHHHHHH
T ss_pred -CCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc-------CCCccChHHHHHHHHHHH
Confidence 24566666 599999999998 799987766 779999999999999999753 346799999999999999
Q ss_pred HHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCC--Cccccccc-cccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVL--DIGDAIPW-LAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
++.++||.+++..++ ....+...+..++...... .+...+|+ +.+++ ...++..++.+.+.+++.++|+++
T Consensus 160 i~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r 233 (476)
T 2fdv_A 160 ISSIVFGDRFDYKDK----EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHN 233 (476)
T ss_dssp HHHHHHSSCCCTTCH----HHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcCCCCCH----HHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999875431 1233444444443322111 11234665 44432 334667778889999999999998
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCc--cccccccHHHHHHHH--------------------HHhcCHHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDP--TLEVKLERDHIKASM--------------------QLLKNPEVIQKATDE 337 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~E 337 (512)
++.. +.....|+++.++++..+. ..+..++++++..++ +|++||++|++|++|
T Consensus 234 ~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E 308 (476)
T 2fdv_A 234 QRTL-----DPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308 (476)
T ss_dssp HTTC-----CTTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHhc-----CCCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 8654 1233579999998764221 113368888887655 899999999999999
Q ss_pred HHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCC
Q 048184 338 LDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNE 417 (512)
Q Consensus 338 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~ 417 (512)
|+++++.++.++.+++++||||+|||+|+||++|+++...+|++.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus 309 i~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~ 388 (476)
T 2fdv_A 309 IDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQD 388 (476)
T ss_dssp HHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTS
T ss_pred HHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccc
Confidence 99999987779999999999999999999999999997677999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCccc-ccCcccccCCC
Q 048184 418 FCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEE-RFGGRTSRKNP 496 (512)
Q Consensus 418 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 496 (512)
|+||||+++++.. ..+..|+|||+|+|.|+|++||++|++++++.|+++|+++++++. +.++... ..+.+..| .+
T Consensus 389 F~PeR~l~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p-~~ 464 (476)
T 2fdv_A 389 FNPQHFLNEKGQF-KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSP--KDIDVSPKHVGFATIP-RN 464 (476)
T ss_dssp CCGGGGBCTTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCG--GGCCCSCSEESSSEEC-CC
T ss_pred cCchhhCCCCCCC-CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCC--CCCCccccccceeecC-Cc
Confidence 9999999754332 245689999999999999999999999999999999999998763 1222333 45677777 58
Q ss_pred ceeeeccCCC
Q 048184 497 LLVVPKPRLP 506 (512)
Q Consensus 497 ~~v~~~~R~~ 506 (512)
++|++++|++
T Consensus 465 ~~v~~~~R~~ 474 (476)
T 2fdv_A 465 YTMSFLPRHH 474 (476)
T ss_dssp CCEEEEEC--
T ss_pred eEEEEEeccc
Confidence 9999999975
No 11
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=8.8e-71 Score=547.95 Aligned_cols=437 Identities=23% Similarity=0.317 Sum_probs=336.7
Q ss_pred CCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184 46 LPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (512)
+.||||+++|++||++.+ .++++..+.+++++||+||++++++.++++|+||+.+++|+.++...|.+++.........
T Consensus 11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 90 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN 90 (477)
T ss_dssp BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTT
T ss_pred CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhcc
Confidence 469999999999999988 5678899999999999999999998899999999999999976666777665432222211
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChh--HHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPK--SLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI 202 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~ 202 (512)
.+.+++++ +|+.|+++||.+ .+.|+.. .++.+.+.+.++++.+++.+... .++++|+.+++..+++++
T Consensus 91 -~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~vd~~~~~~~~~~~v 160 (477)
T 1r9o_A 91 -RGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKT-------KASPCDPTFILGCAPCNV 160 (477)
T ss_dssp -CTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT-------TTSCBCTHHHHHHHHHHH
T ss_pred -CCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc-------CCCccChHHHHHHHHHHH
Confidence 23456555 599999999998 6888876 44678999999999999999753 346799999999999999
Q ss_pred HHHHHhccccCcccccCCCChhHHHHHHHHHHhccC-C-CCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 048184 203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPG-V-LDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHE 280 (512)
Q Consensus 203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 280 (512)
++.++||.+++..++ ....+...+........ . ..+...+|++.+..+. ..++..+..+.+.+++.++|++++
T Consensus 161 i~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~ 235 (477)
T 1r9o_A 161 ICSIIFHKRFDYKDQ----QFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPG-THNKLLKNVAFMKSYILEKVKEHQ 235 (477)
T ss_dssp HHHHHHSCCCCTTCH----HHHHHHHHHHHHHHHHTCCBC-------CCCSCCTT-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCcCCCCCH----HHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999875431 12333333333332211 1 1223356763222222 235677778889999999999988
Q ss_pred HhcccccccCCCcccHHHHHhcccCC--ccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHH
Q 048184 281 RHGKRKLFKEHGTNDIVDVLLQLADD--PTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDEL 338 (512)
Q Consensus 281 ~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei 338 (512)
+..+ .....|+++.++....+ ...+..++++++..++ +|++||++|+||++||
T Consensus 236 ~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei 310 (477)
T 1r9o_A 236 ESMD-----MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEI 310 (477)
T ss_dssp HTCC-----TTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hccC-----CCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 7541 23357999998864321 1112368888887665 8999999999999999
Q ss_pred HHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCC
Q 048184 339 DRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEF 418 (512)
Q Consensus 339 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F 418 (512)
+++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|
T Consensus 311 ~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F 390 (477)
T 1r9o_A 311 ERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMF 390 (477)
T ss_dssp HHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSC
T ss_pred HHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCcccc
Confidence 99999877799999999999999999999999999976779999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCccc-ccCcccccCCCc
Q 048184 419 CPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEE-RFGGRTSRKNPL 497 (512)
Q Consensus 419 ~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 497 (512)
+||||+++++... .+..|+|||+|+|.|+|++||++|++++++.||++|++++.++. +.++... ..++++.| .++
T Consensus 391 ~PeR~l~~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p-~~~ 466 (477)
T 1r9o_A 391 DPHHFLDEGGNFK-KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDP--KNLDTTPVVNGFASVP-PFY 466 (477)
T ss_dssp CGGGGBCTTSCBC-CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCG--GGCCCCCBCCSSSCBC-CCC
T ss_pred CccceECCCCCcC-ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCC--CCCCccCCcCceeecC-CCe
Confidence 9999997643322 45689999999999999999999999999999999999998663 1122223 45667777 589
Q ss_pred eeeeccCCC
Q 048184 498 LVVPKPRLP 506 (512)
Q Consensus 498 ~v~~~~R~~ 506 (512)
+|++++|+.
T Consensus 467 ~~~~~~R~~ 475 (477)
T 1r9o_A 467 QLCFIPIHH 475 (477)
T ss_dssp CEEEEECCC
T ss_pred EEEEEEecc
Confidence 999999965
No 12
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=1.6e-71 Score=550.50 Aligned_cols=423 Identities=18% Similarity=0.232 Sum_probs=345.8
Q ss_pred CCCCCCCC-CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184 46 LPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (512)
+.||||++ +|++||++++..+++.++.++++||||||+++++|.++|+|+||+.+++++.++...|..++.........
T Consensus 11 ~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~ 90 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPV 90 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhcc
Confidence 56788875 99999999998899999999999999999999999999999999999999998877777776544443322
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMS 204 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~ 204 (512)
+ +.++++..+|+.|+++|+.+ .+.|+...++.+.+.+.++++++++.+. ....+|+.+.+..+++++++
T Consensus 91 ~-g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~ 159 (461)
T 3ld6_A 91 F-GKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWG---------ESGEKNVFEALSELIILTAS 159 (461)
T ss_dssp H-CTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGC---------SEEEEEHHHHHHHHHHHHHH
T ss_pred C-CCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHh---------hcCCccHHHHHHHHHHHHHH
Confidence 2 45677766799999999999 7999999999999999999999988774 44578999999999999999
Q ss_pred HHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048184 205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGK 284 (512)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 284 (512)
.++||.+++.... +.+......+...... ....+|.+ + +.....+..++.+.+.+++.+.|++++.+.
T Consensus 160 ~~~fG~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~- 227 (461)
T 3ld6_A 160 HCLHGKEIRSQLN------EKVAQLYADLDGGFSH--AAWLLPGW--L-PLPSFRRRDRAHREIKDIFYKAIQKRRQSQ- 227 (461)
T ss_dssp HHHTCHHHHHTCC------HHHHHHHHHHHTTSSH--HHHHSCTT--S-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHcCcchhhhhh------hhhhhhhhhhhhhhhh--HHHhhhhh--c-cCcHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 9999998865331 4455555544433221 11122321 1 223345677788889999999998887554
Q ss_pred cccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcC
Q 048184 285 RKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGR 344 (512)
Q Consensus 285 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~ 344 (512)
+...|+++.|+++..++ +..++++++..++ +|+.||++|+++++|++++++.
T Consensus 228 ------~~~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~ 299 (461)
T 3ld6_A 228 ------EKIDDILQTLLDATYKD--GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE 299 (461)
T ss_dssp ------CCCCSHHHHHHTCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCT
T ss_pred ------CCCcchhhhhHHhhhcc--cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcc
Confidence 44679999999887665 3468888887665 9999999999999999999987
Q ss_pred C-ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCC
Q 048184 345 N-KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERF 423 (512)
Q Consensus 345 ~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 423 (512)
. ..++.+++++||||+|||+||||++|+++... |.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||
T Consensus 300 ~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRf 378 (461)
T 3ld6_A 300 NLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRY 378 (461)
T ss_dssp TCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGG
T ss_pred cccchhHHHHHHHhhhhheeeeccccCCchhccc-cccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCcccc
Confidence 4 45688889999999999999999999999865 999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 424 VGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 424 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
+++++. ...+..|+|||+|+|.|+|++||++|++++++.||++|||+++++. .+ .....+.+..| .++.|++++
T Consensus 379 l~~~~~-~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~---~~-~~~~~~~~~~p-~~~~v~~~~ 452 (461)
T 3ld6_A 379 LQDNPA-SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY---FP-TVNYTTMIHTP-ENPVIRYKR 452 (461)
T ss_dssp GSCCHH-HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC---CC-CBCCSSSSCCB-SSCEEEEEE
T ss_pred CCCCcc-cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCC---CC-cccccceEEcC-CceEEEEEE
Confidence 987543 2345689999999999999999999999999999999999998774 22 22233444444 488999999
Q ss_pred CCC
Q 048184 504 RLP 506 (512)
Q Consensus 504 R~~ 506 (512)
|+-
T Consensus 453 Rss 455 (461)
T 3ld6_A 453 RST 455 (461)
T ss_dssp CC-
T ss_pred CCC
Confidence 964
No 13
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1.5e-70 Score=546.10 Aligned_cols=439 Identities=24% Similarity=0.377 Sum_probs=349.6
Q ss_pred CCCCCCCCCCCceeeeccccC-CC--ccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184 44 NLLPPPGPKPWHLIVNLNLIG-QN--LHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW 120 (512)
Q Consensus 44 ~~~~ppgP~~~p~lG~~~~~~-~~--~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~ 120 (512)
+.+.||||+++|++||++.+. .. ++..+.+++++|||||++++++.++++|+||+.+++|+.+++..|.+++.....
T Consensus 10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~ 89 (481)
T 3czh_A 10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF 89 (481)
T ss_dssp --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHH
T ss_pred CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHH
Confidence 346799999999999998873 22 889999999999999999999999999999999999998776778877654333
Q ss_pred hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHH--HHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHH
Q 048184 121 KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSL--AQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMF 198 (512)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~ 198 (512)
.... ++.++++..+|+.|+++|+.+ .+.|+...+ ..+++.+.++++.+++.+... .++++|+.+++..+
T Consensus 90 ~~~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~~~d~~~~~~~~ 160 (481)
T 3czh_A 90 MKMT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETY-------KGRPFDFKQLITNA 160 (481)
T ss_dssp HHHH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT-------TTCCBCCHHHHHHH
T ss_pred Hhhc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-------CCCCcCHHHHHHHH
Confidence 2222 223556666799999999999 788876543 568999999999999999753 34579999999999
Q ss_pred HHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCC--ccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 048184 199 NLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLD--IGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVL 276 (512)
Q Consensus 199 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 276 (512)
++++++.++||.+++..+ .....+...+..+........ +...+|++.+++ ....++..+..+.+.+++.++|
T Consensus 161 ~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i 235 (481)
T 3czh_A 161 VSNITNLIIFGERFTYED----TDFQHMIELFSENVELAASASVFLYNAFPWIGILP-FGKHQQLFRNAAVVYDFLSRLI 235 (481)
T ss_dssp HHHHHHHHHHSSCCCTTC----HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCS-SSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCC-chHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986433 112334444444443322211 334578775553 2345677788889999999999
Q ss_pred HHHHHhcccccccCCCcccHHHHHhcccCCc--cccccccHHHHHHHH--------------------HHhcCHHHHHHH
Q 048184 277 HEHERHGKRKLFKEHGTNDIVDVLLQLADDP--TLEVKLERDHIKASM--------------------QLLKNPEVIQKA 334 (512)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l 334 (512)
+++++.. +.....|+++.|+++..+. ..+..++++++..++ +|++||++|+||
T Consensus 236 ~~r~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl 310 (481)
T 3czh_A 236 EKASVNR-----KPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV 310 (481)
T ss_dssp HHHHTTC-----CTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHhc-----CCCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHH
Confidence 9988654 1233579999998764321 112368888887665 999999999999
Q ss_pred HHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184 335 TDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK 414 (512)
Q Consensus 335 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~ 414 (512)
++||+++++.++.++++++++||||+|||+|+||++|+++...+|++.+|++++||.|||||.|.++.+++|+||++|+|
T Consensus 311 ~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~d 390 (481)
T 3czh_A 311 QKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRD 390 (481)
T ss_dssp HHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSS
T ss_pred HHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCC
Confidence 99999999987789999999999999999999999999997777999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC
Q 048184 415 PNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK 494 (512)
Q Consensus 415 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (512)
|++|+||||+++++. ...+..|+|||+|+|.|+|++||++|++++++.||++|++++.++. ..+.....+.+..|.
T Consensus 391 P~~F~PeR~l~~~~~-~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~ 466 (481)
T 3czh_A 391 PEVFHPERFLDSSGY-FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL---VPDLKPRLGMTLQPQ 466 (481)
T ss_dssp TTSCCGGGGBCTTSC-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGC---CCCCCCCSSSSCCCC
T ss_pred ccccCCCceeCCCCC-CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCC---CCCcccCCCceecCC
Confidence 999999999975432 2356789999999999999999999999999999999999987653 222333446666665
Q ss_pred CCceeeeccCCC
Q 048184 495 NPLLVVPKPRLP 506 (512)
Q Consensus 495 ~~~~v~~~~R~~ 506 (512)
++.++++||.+
T Consensus 467 -~~~~~~~~~~~ 477 (481)
T 3czh_A 467 -PYLICAERRHH 477 (481)
T ss_dssp -CCCBEEEECC-
T ss_pred -ceEEEEEeccc
Confidence 88999999965
No 14
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=6.3e-71 Score=550.78 Aligned_cols=433 Identities=20% Similarity=0.335 Sum_probs=335.1
Q ss_pred CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhc-ccccCCCCchhhhhhhc
Q 048184 46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTY-DVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~-~~~~~~~~~~~~~~~~~ 124 (512)
+.||||+++|++||++.+..+++.++.+|+++|||||++++|++++|+|+||+.+++|+.++ ...|..++......
T Consensus 14 ~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~--- 90 (485)
T 3nxu_A 14 LGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG--- 90 (485)
T ss_dssp HTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG---
T ss_pred CCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc---
Confidence 45999999999999999977899999999999999999999999999999999999999876 56677665433221
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMS 204 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~ 204 (512)
..+.++++ .+|+.|+++|+.+ .+.|+...++.+.+.+.++++++++.+..... .++++|+.+++..+++|+++
T Consensus 91 ~~~~~l~~-~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~-----~g~~~d~~~~~~~~~~dvi~ 163 (485)
T 3nxu_A 91 FMKSAISI-AEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAE-----TGKPVTLKDVFGAYSMDVIT 163 (485)
T ss_dssp GGGGSTTT-CCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTCCEEHHHHHHHHHHHHHH
T ss_pred ccccCccc-cCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCcCcHHHHHHHHHHHHHH
Confidence 11234444 4599999999999 79999999999999999999999999976544 46789999999999999999
Q ss_pred HHHhccccCcccccCCCChhHHHHHHHHHHhccCCC---Cccccccccccc----cccchHHHHHHHHHHHHHHHHHHHH
Q 048184 205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVL---DIGDAIPWLAFL----DLQGNIKRMKAVKKKIDKFYEHVLH 277 (512)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~l~~~----~~~~~~~~~~~~~~~l~~~~~~~i~ 277 (512)
.++||.+++..++. ...+...+.......... .....+|++..+ ..... .....+.+.+++.+.++
T Consensus 164 ~~~fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 236 (485)
T 3nxu_A 164 STSFGVNIDSLNNP----QDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF---PREVTNFLRKSVKRMKE 236 (485)
T ss_dssp HHHHSCCCCGGGCT----TCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSS---CHHHHHHHHHHHHHHHH
T ss_pred HHHcCCccccccCC----CcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhc---hHHHHHHHHHHHHHHHH
Confidence 99999999775421 122333322222111000 011233433221 11110 11233445555555555
Q ss_pred HHHHhcccccccCCCcccHHHHHhcccCCcc--ccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184 278 EHERHGKRKLFKEHGTNDIVDVLLQLADDPT--LEVKLERDHIKASM--------------------QLLKNPEVIQKAT 335 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~ 335 (512)
++.+.. .....|+++.++++..+.. .+..++++++..++ +|++||++|+|++
T Consensus 237 ~~~~~~------~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~ 310 (485)
T 3nxu_A 237 SRLEDT------QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 310 (485)
T ss_dssp HHHHCC---------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHhcc------CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 554332 2446799999998654321 13368888887654 9999999999999
Q ss_pred HHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCC
Q 048184 336 DELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKP 415 (512)
Q Consensus 336 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p 415 (512)
+||+++++.++.++++++++||||+|||+|+||++|+++. .+|++.+|++++||.|||||.|.++.+++|+||++|+||
T Consensus 311 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp 389 (485)
T 3nxu_A 311 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 389 (485)
T ss_dssp HHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSST
T ss_pred HHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCc
Confidence 9999999988889999999999999999999999999987 569999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCC
Q 048184 416 NEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKN 495 (512)
Q Consensus 416 ~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (512)
++|+||||++++.. ...+..|+|||.|+|.|+|++||++|++++++.|+++|||+++++. ..+.....+.++.|+.
T Consensus 390 ~~F~PeR~l~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~~ 465 (485)
T 3nxu_A 390 EKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET---QIPLKLSLGGLLQPEK 465 (485)
T ss_dssp TSCCGGGGSHHHHT-TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTC---CSSCCBCSSSSCCBSS
T ss_pred cCcCccccCCCccc-cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCC---CCCcccCCCeeccCCC
Confidence 99999999975422 2245689999999999999999999999999999999999998663 2233344567788988
Q ss_pred CceeeeccCCC
Q 048184 496 PLLVVPKPRLP 506 (512)
Q Consensus 496 ~~~v~~~~R~~ 506 (512)
+++|++++|..
T Consensus 466 ~~~~~~~~r~~ 476 (485)
T 3nxu_A 466 PVVLKVESRDG 476 (485)
T ss_dssp CCEEEEEEC--
T ss_pred CeEEEEEEccC
Confidence 99999999965
No 15
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=6.2e-69 Score=528.89 Aligned_cols=413 Identities=18% Similarity=0.264 Sum_probs=330.2
Q ss_pred CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhcc
Q 048184 46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANY 125 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 125 (512)
+.||||+++|++||++.+..+++ ++.+++++||+||+++++|.++++|+||+.+++|+.++...|..+... ..... .
T Consensus 12 ~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~~~-~ 88 (444)
T 2ve3_A 12 PIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL-STRIL-L 88 (444)
T ss_dssp CCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH-HHHHH-H
T ss_pred CCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH-HHHHH-h
Confidence 56999999999999988855566 888999999999999988889999999999999998765556532211 11111 1
Q ss_pred CCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHH
Q 048184 126 NYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSR 205 (512)
Q Consensus 126 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~ 205 (512)
+..++++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|. .++++|+.+++..+++++++.
T Consensus 89 g~~~l~~~-~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~---------~~~~vd~~~~~~~~~~~vi~~ 157 (444)
T 2ve3_A 89 GPNALATQ-MGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWG---------KANEVIWYPQLRRMTFDVAAT 157 (444)
T ss_dssp CTTSGGGC-CHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHH---------HSSEEEHHHHHHHHHHHHHHH
T ss_pred CccccccC-CchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhc---------CCCcEeHHHHHHHHHHHHHHH
Confidence 22355554 599999999999 7999999999999999999999999985 245799999999999999999
Q ss_pred HHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 048184 206 MLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKR 285 (512)
Q Consensus 206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 285 (512)
++|| +....+ ..+...+..+......+ ...+|+. ..++..++.+.+.+++.++|+++++..
T Consensus 158 ~~fG-~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~r~~~~-- 218 (444)
T 2ve3_A 158 LFMG-EKVSQN-------PQLFPWFETYIQGLFSL--PIPLPNT-------LFGKSQRARALLLAELEKIIKARQQQP-- 218 (444)
T ss_dssp HHTC-HHHHSC-------TTHHHHHHHHHHHHSSC--CCCSTTS-------HHHHHHHHHHHHHHHHHHHHHHHHTSC--
T ss_pred HHcC-CCcccH-------HHHHHHHHHHHHHHhcC--CccCCCc-------HHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999 432211 23333333333221111 1122321 134566778889999999999887652
Q ss_pred ccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCC
Q 048184 286 KLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRN 345 (512)
Q Consensus 286 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~ 345 (512)
....|+++.|+++..++ +..++++++..++ +|++||++|++|++|++.+++.+
T Consensus 219 -----~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~ 291 (444)
T 2ve3_A 219 -----PSEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ 291 (444)
T ss_dssp -----CCCSSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS
T ss_pred -----CCccCHHHHHHhccccC--CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC
Confidence 34579999999876443 3368888887655 99999999999999999998765
Q ss_pred ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCC
Q 048184 346 KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVG 425 (512)
Q Consensus 346 ~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~ 425 (512)
.++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++
T Consensus 292 -~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~ 369 (444)
T 2ve3_A 292 -ELTAETLKKMPYLDQVLQEVLRLIPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTP 369 (444)
T ss_dssp -CCCHHHHTTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSST
T ss_pred -CCChhhhhcChHHHHHHHHHHhcCCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCC
Confidence 689999999999999999999999999985 599999999999999999999999999999999999999999999997
Q ss_pred CCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 426 KEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 426 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
++......+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++. +.+. ..+.++.|+.+++|++++|+
T Consensus 370 ~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~~~~~l~v~~~~r~ 444 (444)
T 2ve3_A 370 DGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ---NLEL--VVTPSPRPKDNLRVKLHSLM 444 (444)
T ss_dssp TSTTTTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC---CCCE--EESSSEEETTCCEEEEEEC-
T ss_pred CCcccCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC---Ccce--eccccccCCCCceEEEEeCC
Confidence 543222345679999999999999999999999999999999999997653 2222 33467788899999999984
No 16
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=4.2e-68 Score=530.66 Aligned_cols=438 Identities=21% Similarity=0.232 Sum_probs=337.0
Q ss_pred CCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184 46 LPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW 120 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~ 120 (512)
+.+|||++.|+. +++.+ .++++..+.+|++||||||++++|+.++|+|+||+.+++|+.++ ..|.+++....+
T Consensus 9 ~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~~ 86 (487)
T 3n9y_A 9 NEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPPW 86 (487)
T ss_dssp GGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHHH
T ss_pred hhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcHH
Confidence 569999988876 66655 23678899999999999999999999999999999999999865 468777654332
Q ss_pred h---hhccCCcccccCCCChhHHHHHHHHHhh-cCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH
Q 048184 121 K---HANYNYLVMPGAPYGPHWRQTRKIYMTQ-LLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF 196 (512)
Q Consensus 121 ~---~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~ 196 (512)
. .....+.+++. .+|+.|+++|+.+ .+ +|+.+.++.+.+.+.++++++++.|.......+ .++.++|+.+++.
T Consensus 87 ~~~~~~~~~~~~l~~-~~g~~w~~~Rr~l-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~-~~~~~vd~~~~~~ 163 (487)
T 3n9y_A 87 VAYHQYYQRPIGVLL-KKSAAWKKDRVAL-NQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAG-SGNYSGDISDDLF 163 (487)
T ss_dssp HHHHHHTTCCCCGGG-CCHHHHHHHHHHH-HHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHT-SSSEEECCHHHHH
T ss_pred HHHHHHccccCCCcc-CCcHHHHHHHHhc-CcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccc-cCCCCccHHHHHH
Confidence 1 11122344544 4599999999999 57 699999999999999999999999976432100 0356799999999
Q ss_pred HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccc-cccccccchHHHHHHHHHHHHHHHHHH
Q 048184 197 MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPW-LAFLDLQGNIKRMKAVKKKIDKFYEHV 275 (512)
Q Consensus 197 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~~~~~~~~~~~~~~~~~l~~~~~~~ 275 (512)
.+++|+++.++||.+++..++........+...+..+...... ...+|. +..+.+....++..+..+.+.+++.+.
T Consensus 164 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (487)
T 3n9y_A 164 RFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIY 240 (487)
T ss_dssp HHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865432222234455555444433221 223442 222112223345555556667777777
Q ss_pred HHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184 276 LHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKAT 335 (512)
Q Consensus 276 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~ 335 (512)
++++.+.............|+++.+++.. .++++++..++ +|+.||++|+|++
T Consensus 241 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~-------~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~ 313 (487)
T 3n9y_A 241 TQNFYWELRQKGSVHHDYRGILYRLLGDS-------KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLR 313 (487)
T ss_dssp HHHHHHHHHHHCCCCSSCCCHHHHHHHSC-------SSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccchHHHHHHHHhcC-------CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHH
Confidence 76655443211111234578999998741 46777776554 8999999999999
Q ss_pred HHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCC
Q 048184 336 DELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKP 415 (512)
Q Consensus 336 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p 415 (512)
+||+++++.++.++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|+++.+++|+||++|+||
T Consensus 314 ~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp 392 (487)
T 3n9y_A 314 AEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 392 (487)
T ss_dssp HHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSST
T ss_pred HHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCc
Confidence 9999999876667799999999999999999999999986 569999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCC
Q 048184 416 NEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKN 495 (512)
Q Consensus 416 ~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (512)
++|+||||++++. ...+..|+|||.|+|.|+|++||++|++++++.||++|+|++.++. +. ....+.++.|+.
T Consensus 393 ~~F~PeR~l~~~~--~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~p~~ 465 (487)
T 3n9y_A 393 ENFDPTRWLSKDK--NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS---DV--GTTFNLILMPEK 465 (487)
T ss_dssp TSCCGGGGTCSCT--TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC---CC--CEEESSSEEESS
T ss_pred ccCChhhcCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc---cc--ccceeeeecCCC
Confidence 9999999997543 2246789999999999999999999999999999999999998652 22 234567889999
Q ss_pred CceeeeccCCC
Q 048184 496 PLLVVPKPRLP 506 (512)
Q Consensus 496 ~~~v~~~~R~~ 506 (512)
+++|++++|+.
T Consensus 466 ~~~~~~~~r~~ 476 (487)
T 3n9y_A 466 PISFTFWPFNQ 476 (487)
T ss_dssp CCCEEEEEC--
T ss_pred CceeEEEECCc
Confidence 99999999965
No 17
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=5.4e-68 Score=523.88 Aligned_cols=426 Identities=16% Similarity=0.275 Sum_probs=321.5
Q ss_pred CCCCC-CCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc
Q 048184 46 LPPPG-PKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppg-P~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (512)
+.||| |+++|++||++.+..+++.++.+++++|||||++++++.++++|+|++.+++++.++...|.+++........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~- 82 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI- 82 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHH-
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhh-
Confidence 46898 8889999999998888999999999999999999999999999999999999998766667776544222211
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMS 204 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~ 204 (512)
+ +.++ .. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+. .++.+|+.+++..+++++++
T Consensus 83 ~-g~~~-~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~---------~~~~vd~~~~~~~~~~~vi~ 149 (455)
T 2cib_A 83 F-GEGV-VF-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWG---------EAGEIDLLDFFAELTIYTSS 149 (455)
T ss_dssp H-C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCC---------SEEEEEHHHHHHHHHHHHHH
T ss_pred c-CCcc-cc-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhC---------CCCcEeHHHHHHHHHHHHHH
Confidence 1 2333 34 489999999999 7999999999999999999999998753 23479999999999999999
Q ss_pred HHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048184 205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGK 284 (512)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 284 (512)
.++||.+++...+ ..+...+..+..... .+...+||+. ....++..++.+.+.+++.++|+++++...
T Consensus 150 ~~~fG~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 217 (455)
T 2cib_A 150 ACLIGKKFRDQLD------GRFAKLYHELERGTD--PLAYVDPYLP----IESFRRRDEARNGLVALVADIMNGRIANPP 217 (455)
T ss_dssp HHHTCHHHHTTCC------HHHHHHHHHHHTTCC--GGGGTCTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHcCCCcchhhh------HHHHHHHHHHHhhhh--HHHHhcccCC----ChhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999864321 455566555543221 1222345431 122345667788899999999999886641
Q ss_pred cccccCCCcccHHHHHhcccCCcccccc-ccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhc
Q 048184 285 RKLFKEHGTNDIVDVLLQLADDPTLEVK-LERDHIKASM--------------------QLLKNPEVIQKATDELDRVIG 343 (512)
Q Consensus 285 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~-l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~ 343 (512)
. .....|+++.|+++..++ +.. ++++++..++ +|+.||++|+||++||+++++
T Consensus 218 ~----~~~~~dll~~ll~~~~~~--~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~ 291 (455)
T 2cib_A 218 T----DKSDRDMLDVLIAVKAET--GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG 291 (455)
T ss_dssp --------CCCHHHHHHHCBCTT--SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG
T ss_pred C----CCCcccHHHHHHHhhhhc--CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 1 112349999999876443 224 8888887655 899999999999999999998
Q ss_pred CCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCC
Q 048184 344 RNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERF 423 (512)
Q Consensus 344 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 423 (512)
.++.++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||
T Consensus 292 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~ 370 (455)
T 2cib_A 292 DGRSVSFHALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370 (455)
T ss_dssp GCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGG
T ss_pred CCCCCCHHHHhcCHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccC
Confidence 76778999999999999999999999999986 46999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcc-cccCcccccCCCceeeec
Q 048184 424 VGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDME-ERFGGRTSRKNPLLVVPK 502 (512)
Q Consensus 424 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~ 502 (512)
++++......+..|+|||+|+|.|+|++||++|++++++.||++|+|+++.+ ..++. ...+.+..|+.+++|+++
T Consensus 371 l~~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~----~~~~~~~~~~~~~~p~~~~~v~~~ 446 (455)
T 2cib_A 371 EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP----PESYRNDHSKMVVQLAQPAAVRYR 446 (455)
T ss_dssp STTTCHHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC----GGGCCEECSSSSCEECSCCEEEEE
T ss_pred CCCCcccccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC----ccccccccccccccCCCCceEEEE
Confidence 9754321113567999999999999999999999999999999999998732 22221 123556677779999999
Q ss_pred cCCCCC
Q 048184 503 PRLPLD 508 (512)
Q Consensus 503 ~R~~~~ 508 (512)
+|+...
T Consensus 447 ~R~~~~ 452 (455)
T 2cib_A 447 RRTGVH 452 (455)
T ss_dssp EC----
T ss_pred ECcccc
Confidence 996543
No 18
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1.7e-67 Score=521.27 Aligned_cols=422 Identities=15% Similarity=0.197 Sum_probs=346.2
Q ss_pred CCCCCCCCC-CceeeeccccCCCccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh
Q 048184 45 LLPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH 122 (512)
Q Consensus 45 ~~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (512)
.+.||||++ +|++||++.+..+++.++.+|+++|| +||+++++++++++|+||+.+++++.++...|..++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 357999665 99999999997789999999999999 9999999999999999999999999887777887765443333
Q ss_pred hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHH-HHHhhccCCCCCCCCceeHHHHHHHHHHH
Q 048184 123 ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLF-KLYKSSTSSSSSSSTPVHLKERLFMFNLA 201 (512)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~~~vdl~~~~~~~~~~ 201 (512)
.. +.++++..+++.|+++|+.+ .+.|+...++.+.+.+.++++++++ .+.. .++.+|+.+++..++++
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~--------~~~~vd~~~~~~~~~~~ 150 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK--------DEGEINLLEDCSTMIIN 150 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS--------SEEEEEHHHHHHHHHHH
T ss_pred Hh--cCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc--------CCCcccHHHHHHHHHHH
Confidence 22 34666655699999999998 7999999999999999999999998 5431 24579999999999999
Q ss_pred HHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048184 202 IMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHER 281 (512)
Q Consensus 202 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 281 (512)
+++.++||.+++... ....+...+..+.... ..+..++|++.+++. +..++..+..+.+.+++.++++++++
T Consensus 151 ~i~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~ 222 (450)
T 3gw9_A 151 TACQCLFGEDLRKRL-----DARRFAQLLAKMESSL--IPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKE 222 (450)
T ss_dssp HHHHHHSCHHHHHHS-----CHHHHHHHHHHHHHTC--CGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcchhhhh-----hhHHHHHHHHHHHhcc--ccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999886532 1255666666554432 223456788876643 33566778889999999999998876
Q ss_pred hcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHh--cCHHHHHHHHHHHH
Q 048184 282 HGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLL--KNPEVIQKATDELD 339 (512)
Q Consensus 282 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~--~~p~~~~~l~~Ei~ 339 (512)
.... ++....|+++.++++..++ +..++++++..++ +|+ .||++|+++++|++
T Consensus 223 ~~~~---~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~ 297 (450)
T 3gw9_A 223 EEVN---KDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 297 (450)
T ss_dssp HHHH---TSCCCCSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHT
T ss_pred hhcc---cCCccchHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHH
Confidence 5311 2345689999999876544 3368888877654 888 99999999999999
Q ss_pred HHhcCCccccccCC-CCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCC
Q 048184 340 RVIGRNKWVEEKDI-VNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEF 418 (512)
Q Consensus 340 ~~~~~~~~~~~~~l-~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F 418 (512)
++ ++.++.+++ ++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|+++.+++|+||++|+||++|
T Consensus 298 ~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F 373 (450)
T 3gw9_A 298 EF---PAQLNYNNVMDEMPFAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 373 (450)
T ss_dssp TC---CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred hc---cCCCChHHHHHhcHHHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCcccc
Confidence 88 445788888 99999999999999999999875 59999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccC-CCc
Q 048184 419 CPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRK-NPL 497 (512)
Q Consensus 419 ~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 497 (512)
+|||+. ..+..|+|||+|+|.|+|++||++|++++++.||++|||+++++. .++. ...+.++.|+ .++
T Consensus 374 ~PeR~~-------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~-~~~~~~~~p~~~~~ 442 (450)
T 3gw9_A 374 DPERDE-------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE---VPDP-DYHTMVVGPTASQC 442 (450)
T ss_dssp CTTCCC-------SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSS---CCCE-ETTSSSCEECGGGC
T ss_pred CCCcCc-------CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCC---CCCC-ccccceecCCCCce
Confidence 999932 135689999999999999999999999999999999999998653 2222 2235667777 899
Q ss_pred eeeeccCC
Q 048184 498 LVVPKPRL 505 (512)
Q Consensus 498 ~v~~~~R~ 505 (512)
.|++++|.
T Consensus 443 ~v~~~~R~ 450 (450)
T 3gw9_A 443 RVKYIRRK 450 (450)
T ss_dssp EEEEEECC
T ss_pred EeEeeecC
Confidence 99999984
No 19
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=2.7e-66 Score=513.60 Aligned_cols=426 Identities=19% Similarity=0.291 Sum_probs=331.7
Q ss_pred CCCCCCCCCceeeecccc-CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh-h
Q 048184 46 LPPPGPKPWHLIVNLNLI-GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH-A 123 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~ 123 (512)
+.||||+++|++||++++ .++++..+.+|+++|||||++++++.++++|+||+.+++|+.+. .|.+... ..... .
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 358999999999999988 45788899999999999999999999999999999999999642 3533222 11111 1
Q ss_pred ccCCcccccC-CCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHH
Q 048184 124 NYNYLVMPGA-PYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAI 202 (512)
Q Consensus 124 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~ 202 (512)
...+.++++. .+|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+... . .++.+|+.+++..+++++
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~-----~~~~vd~~~~~~~~~~~v 152 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERL-N-----ADEHIEVPEDMTRLTLDT 152 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-C-----TTCCEEHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhh-C-----CCCeEEHHHHHHHHHHHH
Confidence 1113455555 4699999999999 799999999999999999999999998743 1 346799999999999999
Q ss_pred HHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048184 203 MSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERH 282 (512)
Q Consensus 203 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 282 (512)
++.++||.+++..+.. ....+...+...+....... ...|++.+++ ....++..+..+.+.+++.++|+++++.
T Consensus 153 i~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 226 (470)
T 2ij2_A 153 IGLCGFNYRFNSFYRD---QPHPFITSMVRALDEAMNKL--QRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKAS 226 (470)
T ss_dssp HHHHHHSCCCCGGGCS---SCCHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcccccccC---CCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999998754211 11334333333322111000 0113333332 2234566677788999999999988765
Q ss_pred cccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHh
Q 048184 283 GKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVI 342 (512)
Q Consensus 283 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~ 342 (512)
. ....|+++.|+++..+.. +..++++++..++ +|++||++|+|+++|+++++
T Consensus 227 ~-------~~~~dll~~ll~~~~~~~-~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~ 298 (470)
T 2ij2_A 227 G-------EQSDDLLTHMLNGKDPET-GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298 (470)
T ss_dssp C-------CCCSSHHHHHHHCCCTTT-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred c-------cCchhHHHHHHhccCccc-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence 3 335699999998754321 3368888887655 89999999999999999999
Q ss_pred cCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecC-cccCCCCEEEEehhhhccCCCCC-CCCCCCCC
Q 048184 343 GRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAG-SNILKNSRVIVNVWAIGRDPTLW-EKPNEFCP 420 (512)
Q Consensus 343 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p 420 (512)
+.+ .++++++++||||+|||+|+||++|+++.. +|.+.+|++++| |.|||||.|.++.+++||||++| +||++|+|
T Consensus 299 ~~~-~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~P 376 (470)
T 2ij2_A 299 VDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376 (470)
T ss_dssp CSS-SCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCG
T ss_pred CCC-CCCHHHHhCCHHHHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCc
Confidence 864 489999999999999999999999999985 599999999999 99999999999999999999999 99999999
Q ss_pred CCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceee
Q 048184 421 ERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVV 500 (512)
Q Consensus 421 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 500 (512)
||| ++ .....+..|+|||+|+|.|+|++||++|++++++.||++|+|+ ..+ ..+.....+++..|. +++|+
T Consensus 377 eR~-~~--~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~----~~~~~~~~~~~~~p~-~~~v~ 447 (470)
T 2ij2_A 377 ERF-EN--PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHT----NYELDIKETLTLKPE-GFVVK 447 (470)
T ss_dssp GGG-SS--GGGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTT----CCCCCEEESSSEEET-TCEEE
T ss_pred ccc-CC--CCcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCC----CCccccccceEecCC-CeEEE
Confidence 999 32 1112346899999999999999999999999999999999999 322 122223346677888 99999
Q ss_pred eccCCC
Q 048184 501 PKPRLP 506 (512)
Q Consensus 501 ~~~R~~ 506 (512)
+++|+.
T Consensus 448 ~~~R~~ 453 (470)
T 2ij2_A 448 AKSKKI 453 (470)
T ss_dssp EEECCC
T ss_pred EEEccC
Confidence 999953
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=2.8e-66 Score=513.45 Aligned_cols=422 Identities=18% Similarity=0.254 Sum_probs=338.1
Q ss_pred CCCCCC-CCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh
Q 048184 45 LLPPPG-PKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA 123 (512)
Q Consensus 45 ~~~ppg-P~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~ 123 (512)
.+.||| |+++|++||++.+..+++.++.+|+++|||||+++++|+++++|++++.+++++.++...+..+.........
T Consensus 10 ~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~ 89 (461)
T 3i3k_A 10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP 89 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhhh
Confidence 367999 8899999999999788999999999999999999999999999999999999998776556554332222111
Q ss_pred ccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHH
Q 048184 124 NYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIM 203 (512)
Q Consensus 124 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~ 203 (512)
.+ +.++.+..+|+.|+++||.+ .+.|+...++.+.+.+.++++++++.|. .+..+|+.+++..++++++
T Consensus 90 ~~-g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~---------~~~~~dl~~~~~~~~~~~~ 158 (461)
T 3i3k_A 90 VF-GKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWG---------ESGEKNVFEALSELIILTA 158 (461)
T ss_dssp HH-CTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGC---------SEEEEEHHHHHHHHHHHHH
T ss_pred hc-CCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhh---------hcCCcCHHHHHHHHHHHHH
Confidence 12 45666666699999999999 7999999999999999999999998774 2345899999999999999
Q ss_pred HHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 048184 204 SRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHG 283 (512)
Q Consensus 204 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 283 (512)
+.++||.++..... ..+...+..+...... ....+|. |+ +....++..+..+.+.+++.+.++++++..
T Consensus 159 ~~~~~G~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~P~--~l-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 227 (461)
T 3i3k_A 159 SHCLHGKEIRSQLN------EKVAQLYADLDGGFSH--AAWLLPG--WL-PLPSFRRRDRAHREIKDIFYKAIQKRRQSQ 227 (461)
T ss_dssp HHHHTCHHHHHTCC------HHHHHHHHHHHTTSSH--HHHHSCT--TS-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHccHhhhhHHH------HHHHHHHHHHHhcccc--chhhccc--cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999988754321 4444544444332211 1112331 22 122346677788889999999999887554
Q ss_pred ccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhc
Q 048184 284 KRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIG 343 (512)
Q Consensus 284 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~ 343 (512)
+...|+++.+++...++ +..++++++..++ +|+.||++|+++++||+++++
T Consensus 228 -------~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~ 298 (461)
T 3i3k_A 228 -------EKIDDILQTLLDATYKD--GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCG 298 (461)
T ss_dssp -------CCCCSHHHHHHTCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred -------cccccHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence 34679999999877544 3368888877654 899999999999999999998
Q ss_pred CC-ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 048184 344 RN-KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPER 422 (512)
Q Consensus 344 ~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R 422 (512)
.+ ..++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|||
T Consensus 299 ~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R 377 (461)
T 3i3k_A 299 ENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDR 377 (461)
T ss_dssp TTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGG
T ss_pred CCCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCC
Confidence 75 346889999999999999999999999976 4699999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeec
Q 048184 423 FVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPK 502 (512)
Q Consensus 423 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 502 (512)
|++++.. ...+..|+|||+|+|.|||++||.+|++++++.||++|||+++++. .+.. .....+..|++++.+.-.
T Consensus 378 fl~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~-~~~~~~~~p~~~~~~~~~ 452 (461)
T 3i3k_A 378 YLQDNPA-SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY---FPTV-NYTTMIHTPENPVIRYKR 452 (461)
T ss_dssp GGSCCHH-HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC---CCCB-CCSSSSCCBSSCEEEEEE
T ss_pred CCCCCCC-CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCC---CCCc-ccceeecCCCCceEEeec
Confidence 9976432 2245689999999999999999999999999999999999998773 2222 234566788887766544
Q ss_pred c
Q 048184 503 P 503 (512)
Q Consensus 503 ~ 503 (512)
+
T Consensus 453 ~ 453 (461)
T 3i3k_A 453 R 453 (461)
T ss_dssp C
T ss_pred c
Confidence 3
No 21
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=3.5e-65 Score=505.03 Aligned_cols=410 Identities=20% Similarity=0.324 Sum_probs=324.9
Q ss_pred CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh----ccCCcccccCCCChhH
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA----NYNYLVMPGAPYGPHW 139 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~w 139 (512)
+..+|..+.+|+++|||||+++++++++|+|+||+.+++|+.++ .|.+++........ ...+.++++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 46788999999999999999999999999999999999999743 45544332211111 1123566666679999
Q ss_pred HHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhccccCcccccC
Q 048184 140 RQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFGKRYTEEDENN 219 (512)
Q Consensus 140 ~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~ 219 (512)
+++||.+ .+.|+.+.++.+.+.+.++++.+++.+..... ++.++|+.+++..+++|+++.++||.+++.....
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~- 159 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKAD-----GQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGA- 159 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCS-----SSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTC-
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCeeeHHHHHHHHHHHHHHHHHcCCChhhhccc-
Confidence 9999999 79999999999999999999999999987644 5678999999999999999999999999764321
Q ss_pred CCChhHHHHHHHHHHhccCCCCccccccccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHH
Q 048184 220 IVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDL-QGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVD 298 (512)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~ 298 (512)
...+...+..+...... ...|++.+++. ....+...+..+.+.+++.++++++++..+.. .....|+++
T Consensus 160 ---~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---~~~~~d~l~ 229 (456)
T 3mdm_A 160 ---QKPLSQAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG---EEVPADILT 229 (456)
T ss_dssp ---CHHHHHHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCCCCHHH
T ss_pred ---ccHHHHHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchhhHHH
Confidence 13333333333321110 01222333221 12234556677788888889998887664221 234579999
Q ss_pred HHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChh
Q 048184 299 VLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPY 358 (512)
Q Consensus 299 ~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~ 358 (512)
.++++..+ .++++++..++ +|+.||++|+|+++|++++++.++.++.+++++|||
T Consensus 230 ~ll~~~~~-----~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpy 304 (456)
T 3mdm_A 230 QILKAEEG-----AQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQY 304 (456)
T ss_dssp HHHHHTSS-----CSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHH
T ss_pred HHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHH
Confidence 99986521 35566665443 999999999999999999999888899999999999
Q ss_pred HHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcccee
Q 048184 359 IQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELL 438 (512)
Q Consensus 359 l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~ 438 (512)
|+|||+||||++|+++... |.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||+++. ......|+
T Consensus 305 l~a~i~E~lRl~p~~~~~~-r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~---~~~~~~~~ 380 (456)
T 3mdm_A 305 LSQVLKESLRLYPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA---PKPRFTYF 380 (456)
T ss_dssp HHHHHHHHHHHCCSSCCEE-EEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTS---CCCSSSCC
T ss_pred HHHHHHHHHHhCCCccccc-cccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCC---CCCCCccc
Confidence 9999999999999999765 9999999999999999999999999999999999999999999999764 22456899
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeeccCCC
Q 048184 439 PFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 439 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 506 (512)
|||+|+|.|+|++||++|++++++.|+++|+|+++++. ..+. ....++.|+.++.|++++|..
T Consensus 381 pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~p~~~~~~~~~~r~~ 443 (456)
T 3mdm_A 381 PFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ---RFGL--QEQATLKPLDPVLCTLRPRGW 443 (456)
T ss_dssp TTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC---CCCE--EESSSEEESSCCEEEEEECCC
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC---ccee--ecceEEecCCCeEEEEEEcCC
Confidence 99999999999999999999999999999999998763 3333 335678899999999999953
No 22
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=1e-66 Score=517.04 Aligned_cols=418 Identities=20% Similarity=0.298 Sum_probs=312.7
Q ss_pred CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhccccc-CCCCchhhhhhhc
Q 048184 46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTF-ASRPPLLAWKHAN 124 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~-~~~~~~~~~~~~~ 124 (512)
.+||||+++|++||++.+..+++.++.++++ |||||++++++.++++|+||+.+++|+.++ .| .+++........
T Consensus 23 eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~- 98 (467)
T 3dbg_A 23 EPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL- 98 (467)
T ss_dssp BCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC--------------
T ss_pred CCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh-
Confidence 5689999999999999997789999999988 999999999999999999999999999865 55 333222211111
Q ss_pred cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHH
Q 048184 125 YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMS 204 (512)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~ 204 (512)
.+..+++ ..+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+. .++++|+.+++..+++++++
T Consensus 99 ~g~~~l~-~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~---------~~~~~d~~~~~~~~~~~vi~ 167 (467)
T 3dbg_A 99 LGKEGVA-TANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQ---------PGKTVDATSESFRVAVRVAA 167 (467)
T ss_dssp ------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSC---------TTSCEEHHHHHHHHHHHHHH
T ss_pred cCCCCcc-cCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhc---------cCCcCcHHHHHHHHHHHHHH
Confidence 1113444 45599999999999 7999999999999999999999999874 35689999999999999999
Q ss_pred HHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048184 205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPW--LAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERH 282 (512)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 282 (512)
.++||.+++... ...+...+..+...... ...+|+ +.+++ ....++..+..+.+.+++.+++++++++
T Consensus 168 ~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 237 (467)
T 3dbg_A 168 RCLLRGQYMDER------AERLCVALATVFRGMYR---RMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEIIAERRAS 237 (467)
T ss_dssp HHHSCSSCCHHH------HHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTC
T ss_pred HHHhCCcccchh------HHHHHHHHHHHHHHHHH---HhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999986522 25555555555543221 223442 22222 2223566677788999999999888765
Q ss_pred cccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHh
Q 048184 283 GKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVI 342 (512)
Q Consensus 283 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~ 342 (512)
. ....|+++.|+++..++ +..++++++..++ +|+.||++|++|++|+++++
T Consensus 238 ~-------~~~~dll~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~ 308 (467)
T 3dbg_A 238 G-------QKPDDLLTALLEAKDDN--GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT 308 (467)
T ss_dssp C-------SSCCSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred C-------CCchHHHHHHHhhccCC--CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence 3 34579999999876543 2358888887655 99999999999999999999
Q ss_pred cCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 048184 343 GRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPER 422 (512)
Q Consensus 343 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R 422 (512)
++ +.++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|||||
T Consensus 309 ~~-~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR 386 (467)
T 3dbg_A 309 GG-RPVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDR 386 (467)
T ss_dssp TT-SCCCHHHHTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGG
T ss_pred CC-CCCCHHHHhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCcc
Confidence 86 668999999999999999999999999987 4699999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeec
Q 048184 423 FVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPK 502 (512)
Q Consensus 423 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 502 (512)
|++++.. ...+..|+|||+|+|.|+|++||++|++++++.|+++||+++.++. . .....+++++|+ ++.++-.
T Consensus 387 fl~~~~~-~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~~~~~~~~~~p~-~l~~~~~ 459 (467)
T 3dbg_A 387 WLPERAA-NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS---N--DAVRVGITLRPH-DLLVRPV 459 (467)
T ss_dssp GSHHHHT-TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC---E--EEEEESSSEEEE-ECEEEEE
T ss_pred CCCCccc-cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC---C--CccceeeEecCC-CCccchh
Confidence 9965322 2245689999999999999999999999999999999999998763 2 223457788887 8888887
Q ss_pred cCCC
Q 048184 503 PRLP 506 (512)
Q Consensus 503 ~R~~ 506 (512)
.|.+
T Consensus 460 ~~~~ 463 (467)
T 3dbg_A 460 ARHH 463 (467)
T ss_dssp ECC-
T ss_pred hhhc
Confidence 7754
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=2.2e-64 Score=503.69 Aligned_cols=438 Identities=16% Similarity=0.199 Sum_probs=328.1
Q ss_pred HHhhcCCCCCCCCCCC-CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc
Q 048184 38 IFRNKINLLPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP 116 (512)
Q Consensus 38 ~~~~~~~~~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~ 116 (512)
++.++.+.+.||||++ +|++||++.+..+++.++.+++++|||||++++++.++++|++|+++++++.+.. .+.....
T Consensus 5 ~~~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~-~~~~~~~ 83 (491)
T 3v8d_A 5 TSSRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKF 83 (491)
T ss_dssp --CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCT-TEESSHH
T ss_pred hhhhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCC-ccchHHH
Confidence 3444555678999998 7999999999999999999999999999999999999999999999999997653 2322222
Q ss_pred hhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH
Q 048184 117 LLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF 196 (512)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~ 196 (512)
........+ +.+.....+|+.|+++|+.+ .+.|++..++.+.+.+.+++.++++.+.....+ ...+..+++.+++.
T Consensus 84 ~~~~~~~~~-g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~--~~~~~~~~l~~~~~ 159 (491)
T 3v8d_A 84 HFALSAKAF-GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSK--TAAWVTEGMYSFCY 159 (491)
T ss_dssp HHHHHHHHH-TCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGG--GCSCEEEEHHHHHH
T ss_pred HHHHHHHhc-CCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccC--CCCCcccCHHHHHH
Confidence 111111112 22333334599999999988 799999999999999999999998754322111 01356789999999
Q ss_pred HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 048184 197 MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVL 276 (512)
Q Consensus 197 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 276 (512)
.+++++++..+||.++...++ ....+...++.+.. +...+|++.+..+....++..++.+++.+++.+.+
T Consensus 160 ~~~~~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~~~------~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~ 229 (491)
T 3v8d_A 160 RVMFEAGYLTIFGRDLTRRDT----QKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESLRHEN 229 (491)
T ss_dssp HHHHHHHHHHHHCBCCSCGGG----HHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHH
T ss_pred HHHHHHHHHHHcCccccccch----hhhhhHHHHHHHHH------HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999764321 11333444443332 12234443332233444677777777777766655
Q ss_pred HHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHH
Q 048184 277 HEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATD 336 (512)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~ 336 (512)
++++ ....|+++.++....+.+ .++++++..++ +|+.||++|+++++
T Consensus 230 ~~~~----------~~~~d~l~~l~~~~~~~~---~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~ 296 (491)
T 3v8d_A 230 LQKR----------ESISELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATE 296 (491)
T ss_dssp HTTC----------BSCCHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred Hhcc----------ccccHHHHHHHHHhhccC---CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4332 234789998887654332 57777776554 99999999999999
Q ss_pred HHHHHhcCC----------ccccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee----cCcccCCCCEEEEeh
Q 048184 337 ELDRVIGRN----------KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV----AGSNILKNSRVIVNV 402 (512)
Q Consensus 337 Ei~~~~~~~----------~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~ 402 (512)
||+++++.+ ..++.++++++|||+|||+|+||++|+ +. .+|.+.+|+++ +||.||||+.|.++.
T Consensus 297 Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~ 374 (491)
T 3v8d_A 297 EVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374 (491)
T ss_dssp HHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECT
T ss_pred HHHHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecc
Confidence 999998753 346788888999999999999999974 44 45999999999 999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCCCCCCc--------ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCC
Q 048184 403 WAIGRDPTLWEKPNEFCPERFVGKEIDV--------VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPG 474 (512)
Q Consensus 403 ~~~~~d~~~~~~p~~F~p~R~l~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~ 474 (512)
+++|+|+++|+||++|+|+||++.+... ...+..|+|||+|+|.|||++||.+|++++++.|+++|||++++
T Consensus 375 ~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~ 454 (491)
T 3v8d_A 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIE 454 (491)
T ss_dssp HHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC-
T ss_pred hhhcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCC
Confidence 9999999999999999999999765331 12356899999999999999999999999999999999999987
Q ss_pred CCCCC-CCCcccccCcccccCCCceeeeccCC
Q 048184 475 DMKKE-DLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 475 ~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
+.... ..+.......+..|+.+++|++|=..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~p~~~i~v~~~~~~ 486 (491)
T 3v8d_A 455 GQAKCPPLDQSRAGLGILPPLNDIEFKYKFKH 486 (491)
T ss_dssp --CCCCCBCGGGTBEEECCBSSCCEEEEEECS
T ss_pred CCCCCCCCCcccCcCcccCCCCCeEEEEEecc
Confidence 63222 22232233456788999999888543
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=3e-63 Score=496.13 Aligned_cols=435 Identities=17% Similarity=0.212 Sum_probs=309.5
Q ss_pred hcCCCCCCCCCCC-CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhh
Q 048184 41 NKINLLPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLA 119 (512)
Q Consensus 41 ~~~~~~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~ 119 (512)
+....+.||||++ +|++||++++..+++.++.+|+++||+||++++++.++++|+||+.+++++.++.. +..++....
T Consensus 8 ~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~ 86 (491)
T 3dax_A 8 RRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFA 86 (491)
T ss_dssp CCCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHH
T ss_pred hccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHH
Confidence 3344467999988 89999999997889999999999999999999999999999999999999976531 222222111
Q ss_pred hhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHH
Q 048184 120 WKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFN 199 (512)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~ 199 (512)
.....+ +.+.+...+|+.|+++|+.+ .+.|+...+..+.+.+.+.+.+++........ ....+..+++..++..++
T Consensus 87 ~~~~~~-g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~l~~~~~~~i 162 (491)
T 3dax_A 87 TSAKAF-GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNS--KTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHH-TCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC------------CCEEEEHHHHHHHHH
T ss_pred HHHHHc-CCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCc--CCCCceeccHHHHHHHHH
Confidence 111111 23333133488899999998 58999999988888888888777765432210 001345689999999999
Q ss_pred HHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 200 LAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 200 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
+++++.++||.++...++ ....+....+.+.. +...+|++.+..+.+..++..+..+.+.+.+ ++++
T Consensus 163 ~~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~ 229 (491)
T 3dax_A 163 FEAGYLTIFGRDLTRRDT----QKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHEN 229 (491)
T ss_dssp HHHHHHHHHCBCSTTGGG----HHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHH
T ss_pred HHHhHHHHcCcccccccc----hhhhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHH
Confidence 999999999988754321 11122222222211 1234554433222222234444444443332 2222
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELD 339 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~ 339 (512)
.+.. ....|+++.+++...+.+ .++++++...+ +|++||++|+|+++||+
T Consensus 230 ~~~~-------~~~~d~l~~ll~~~~~~~---~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~ 299 (491)
T 3dax_A 230 LQKR-------ESISELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVK 299 (491)
T ss_dssp HTTC-------BSCCHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred hhcc-------cchhHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 2221 235789998876543221 35666654322 99999999999999999
Q ss_pred HHhcCCc----------cccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee----cCcccCCCCEEEEehhhh
Q 048184 340 RVIGRNK----------WVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV----AGSNILKNSRVIVNVWAI 405 (512)
Q Consensus 340 ~~~~~~~----------~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~ 405 (512)
++++.++ .++.+++++||||+|||+||||++|+ +. .+|.+.+|+++ +||.|||||.|+++.+++
T Consensus 300 ~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~ 377 (491)
T 3dax_A 300 RTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLM 377 (491)
T ss_dssp HHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHH
T ss_pred HHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhh
Confidence 9998643 35889999999999999999999974 54 46999999999 789999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCcc--------cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCC
Q 048184 406 GRDPTLWEKPNEFCPERFVGKEIDVV--------GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMK 477 (512)
Q Consensus 406 ~~d~~~~~~p~~F~p~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~ 477 (512)
|+||++|+||++|+||||+++++... ..+..|+|||+|+|.|||++||++|++++++.||++|||++.++..
T Consensus 378 ~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~ 457 (491)
T 3dax_A 378 HLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA 457 (491)
T ss_dssp HTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTC
T ss_pred cCCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCC
Confidence 99999999999999999997543211 1356899999999999999999999999999999999999976631
Q ss_pred CCCCCccc-ccC-cccccCCCceeeeccCCC
Q 048184 478 KEDLDMEE-RFG-GRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 478 ~~~~~~~~-~~~-~~~~~~~~~~v~~~~R~~ 506 (512)
..++... ..+ .+.+|+.+++|+++.+.+
T Consensus 458 -~~~~~~~~~~~~~~~~p~~~~~~~~r~~~~ 487 (491)
T 3dax_A 458 -KCPPLDQSRAGLGILPPLNDIEFKYKFKHH 487 (491)
T ss_dssp -CCCCBCGGGTBEEECCBSSCCEEEEEECCC
T ss_pred -CCCCCCcccccccccCCCCCceEEEEeccc
Confidence 1222222 124 356888899999988754
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=5.3e-61 Score=480.40 Aligned_cols=434 Identities=15% Similarity=0.147 Sum_probs=304.2
Q ss_pred cCCCCCCCCCCC-CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184 42 KINLLPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW 120 (512)
Q Consensus 42 ~~~~~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~ 120 (512)
....+.||||++ +|++||++.+..+++.++.+|+++|||||++++++.+++||+||+.+++++.++...+..++.....
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 334467999998 8999999988667899999999999999999999999999999999999998664324433322111
Q ss_pred hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184 121 KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL 200 (512)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~ 200 (512)
....+ +.+.+.. +++.| |+.+ .+.|+...++.+.+.+.+.+.+.+......... .+..+++..++..+++
T Consensus 94 ~~~~~-g~~~~~~-~~~~~---rr~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~l~~~~~~vi~ 163 (498)
T 3b6h_A 94 MERIF-DVQLPHY-SPSDE---KARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGS----GWHEMGLLDFSYSFLL 163 (498)
T ss_dssp HHHTS-CCCCTTC-CHHHH---HHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCS----SCEEEEHHHHHHHHHH
T ss_pred HHHHc-CCCcccc-CHHHH---HHHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCC----CcceecHHHHHHHHHH
Confidence 11112 2344433 36665 4555 578888888888887777777777665432111 4556899999999999
Q ss_pred HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccc-ccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAF-LDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
++++.++||.+++..+.. ........+..+..... .+...+|++.+ +.+....++..+..+.+.+.+ ++++
T Consensus 164 ~~~~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 235 (498)
T 3b6h_A 164 RAGYLTLYGIEALPRTHE---SQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPAR 235 (498)
T ss_dssp HHHHHHHHCBSCSSCCHH---HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHH
T ss_pred HHHHHhhcCccccccccc---chhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHH
Confidence 999999999987543210 00012222222221110 11234564332 111111223333333333322 2222
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-------------------HHhcCHHHHHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-------------------QLLKNPEVIQKATDELDR 340 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-------------------~L~~~p~~~~~l~~Ei~~ 340 (512)
.+.. ....|+++.+++...+.+ .++++++..++ +|+.||++|+|+++||++
T Consensus 236 ~~~~-------~~~~d~l~~ll~~~~~~~---~~~~~~~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~ 305 (498)
T 3b6h_A 236 LARR-------AHRSKWLESYLLHLEEMG---VSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELES 305 (498)
T ss_dssp HTTC-------BSCCHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred Hhcc-------ccHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 2221 335689999887654321 34555554221 999999999999999999
Q ss_pred HhcCCcc-------ccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee-----cCcccCCCCEEEEehhh-hcc
Q 048184 341 VIGRNKW-------VEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV-----AGSNILKNSRVIVNVWA-IGR 407 (512)
Q Consensus 341 ~~~~~~~-------~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-----~g~~ip~G~~v~~~~~~-~~~ 407 (512)
+++.++. ++.+++++||||+|||+||||++|+ +. .+|.+.+|+++ +||.|||||.|+++.++ +|+
T Consensus 306 v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~ 383 (498)
T 3b6h_A 306 ILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQR 383 (498)
T ss_dssp HHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCT
T ss_pred HhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcC
Confidence 9987542 5899999999999999999999985 54 46999999998 68999999999999999 999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcc--------cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCC
Q 048184 408 DPTLWEKPNEFCPERFVGKEIDVV--------GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKE 479 (512)
Q Consensus 408 d~~~~~~p~~F~p~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~ 479 (512)
||++|+||++|+||||+++++... ..+..|+|||+|+|.|||++||++|++++++.||++|||+++++...
T Consensus 384 d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~- 462 (498)
T 3b6h_A 384 DPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVE- 462 (498)
T ss_dssp CTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCC-
T ss_pred CccccCChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCC-
Confidence 999999999999999997543211 13568999999999999999999999999999999999999765311
Q ss_pred CCCccc--ccCcccccCCCceeeeccCCC
Q 048184 480 DLDMEE--RFGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 480 ~~~~~~--~~~~~~~~~~~~~v~~~~R~~ 506 (512)
.++.+. ....+..|+.+++|++++|.+
T Consensus 463 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 491 (498)
T 3b6h_A 463 IPEFDLSRYGFGLMQPEHDVPVRYRIRPH 491 (498)
T ss_dssp CCCBCGGGTBSSBCCBSSCCEEEEEECCC
T ss_pred CCCCCccccccccCCCCCCccEEEEeccc
Confidence 122221 223456888899999999854
No 26
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=4.3e-60 Score=463.01 Aligned_cols=379 Identities=15% Similarity=0.181 Sum_probs=292.1
Q ss_pred CCCCCCCCCceeeecc-ccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh
Q 048184 46 LPPPGPKPWHLIVNLN-LIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA 123 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~-~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~ 123 (512)
+.||||+++|++|++. .+..+++.++.++ ++|||||++++ ++.++++|+|++++++|+.++ .|.+++........
T Consensus 26 ~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 102 (436)
T 2cd8_A 26 QGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLT 102 (436)
T ss_dssp --------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCC
T ss_pred cCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccccc
Confidence 5699999999999976 4567899999999 99999999997 778899999999999999865 57666532111100
Q ss_pred ---ccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHH
Q 048184 124 ---NYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFN 199 (512)
Q Consensus 124 ---~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~ 199 (512)
...+.++++ .+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|... .++++|+.+++ ..++
T Consensus 103 ~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-------~~~~vd~~~~~~~~~~ 173 (436)
T 2cd8_A 103 EAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAA-------PDGRADLMESLAWPLP 173 (436)
T ss_dssp TTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTC-------TTSCEEHHHHTTTHHH
T ss_pred cccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCCcchHHHHHHHHH
Confidence 112344554 4599999999999 799999999999999999999999999742 34579999977 5799
Q ss_pred HHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 200 LAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 200 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
+++++. +||.+.+.. ..+......+.... + + ++..++.+.+.+++.++|+++
T Consensus 174 ~~vi~~-~~G~~~~~~--------~~~~~~~~~~~~~~---------~------~----~~~~~~~~~~~~~~~~~i~~r 225 (436)
T 2cd8_A 174 ITVISE-LLGVPEPDR--------AAFRVWTDAFVFPD---------D------P----AQAQTAMAEMSGYLSRLIDSK 225 (436)
T ss_dssp HHHHHH-HHTCCGGGH--------HHHHHHHHHHHSCS---------S------T----THHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhCCCHHHH--------HHHHHHHHHHhccC---------C------H----HHHHHHHHHHHHHHHHHHHHH
Confidence 999998 799876321 45555555544310 0 1 345667788899999999887
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELD 339 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~ 339 (512)
+++. ..|+++.|+++..++ +..++++++..++ +|++||++|+|+++|++
T Consensus 226 ~~~~---------~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~ 294 (436)
T 2cd8_A 226 RGQD---------GEDLLSALVRTSDED--GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT 294 (436)
T ss_dssp TTSC---------CCSHHHHHHHHHHHC--TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred hcCC---------CCCHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh
Confidence 7532 368999999765431 2368888887665 89999999999999852
Q ss_pred HHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCC
Q 048184 340 RVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFC 419 (512)
Q Consensus 340 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~ 419 (512)
||+|||+|+||++|+++...+|++.+|++++||.||||+.|+++.+++|+||++|+||++|+
T Consensus 295 ------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~ 356 (436)
T 2cd8_A 295 ------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD 356 (436)
T ss_dssp ------------------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCC
T ss_pred ------------------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccC
Confidence 79999999999999999667799999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCce
Q 048184 420 PERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLL 498 (512)
Q Consensus 420 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (512)
||||- ..++|||.|+|.|+|++||++|++++++.|+++| +++++.+. .++.+ ..+.++++..+++
T Consensus 357 PeR~~----------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~l~ 422 (436)
T 2cd8_A 357 IRRDT----------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSP--GELVW--YPNPMIRGLKALP 422 (436)
T ss_dssp TTSCC----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCG--GGCCB--CCCTTBCCBSCCE
T ss_pred CCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCC--cccee--ccCcccCCcceeE
Confidence 99961 3689999999999999999999999999999999 69996431 22333 2344557777999
Q ss_pred eeeccCCCC
Q 048184 499 VVPKPRLPL 507 (512)
Q Consensus 499 v~~~~R~~~ 507 (512)
|++++|.++
T Consensus 423 v~~~~r~~~ 431 (436)
T 2cd8_A 423 IRWRRGREA 431 (436)
T ss_dssp EC-------
T ss_pred EEEecCccc
Confidence 999999764
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=2.7e-59 Score=456.37 Aligned_cols=384 Identities=16% Similarity=0.240 Sum_probs=301.2
Q ss_pred CceeeeccccCCCccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchh-hhhhhccCCcccc
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLL-AWKHANYNYLVMP 131 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 131 (512)
.|++||++.+..+++.++.+++++|| |||+++++|.+++++++++.++.++. . ..|.+..... ......++..+++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l~ 85 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAIQ 85 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhcccccee
Confidence 38999999987789999999999998 89999988899999999999986543 2 3455443211 1111112223444
Q ss_pred cCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhccc
Q 048184 132 GAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFGKR 211 (512)
Q Consensus 132 ~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~ 211 (512)
..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.|. .++++|+.+++..+++++++.+ ||.+
T Consensus 86 -~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~---------~~~~~dl~~~~~~~~~~vi~~~-~G~~ 153 (417)
T 1izo_A 86 -GMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWE---------KADEVVLFEEAKEILCRVACYW-AGVP 153 (417)
T ss_dssp -GCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHT---------TSSEEEHHHHHHHHHHHHHHHH-HTCC
T ss_pred -ecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHh---------cCCCeeHHHHHHHHHHHHHHHH-cCCC
Confidence 44599999999998 7999999999999999999999999885 3457999999999999999998 6988
Q ss_pred cCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 048184 212 YTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEH 291 (512)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 291 (512)
++..+ ...+...+..+...... ..| ...+..++.+.+.+++.++|+++++... ..
T Consensus 154 ~~~~~------~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~-----~~ 208 (417)
T 1izo_A 154 LKETE------VKERADDFIDMVDAFGA-----VGP---------RHWKGRRARPRAEEWIEVMIEDARAGLL-----KT 208 (417)
T ss_dssp CCTTT------HHHHHHHHHHHHHHTTC-----CSH---------HHHHHHHHHHHHHHHHHHHHHHHHTTSS-----CC
T ss_pred CCchH------HHHHHHHHHHHHhhccc-----CCc---------cchhHHHHHHHHHHHHHHHHHHHHhhcc-----CC
Confidence 75421 23444433333332111 111 1234567788899999999999886541 22
Q ss_pred CcccHHHHHhcccCCccccccccHHHHHHHH-------------------HHhcCHHHHHHHHHHHHHHhcCCccccccC
Q 048184 292 GTNDIVDVLLQLADDPTLEVKLERDHIKASM-------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKD 352 (512)
Q Consensus 292 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 352 (512)
...|+++.|++...++ +..++++++...+ +|++||++|+++++|
T Consensus 209 ~~~d~l~~ll~~~~~~--g~~l~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--------------- 271 (417)
T 1izo_A 209 TSGTALHEMAFHTQED--GSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG--------------- 271 (417)
T ss_dssp CTTSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC---------------
T ss_pred CcCCHHHHHHHhcccc--CCCCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc---------------
Confidence 3568999999875433 2246665443321 899999999999997
Q ss_pred CCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCccc
Q 048184 353 IVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVG 432 (512)
Q Consensus 353 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~ 432 (512)
++||++|||+|+||++|+++. .+|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||++++ .
T Consensus 272 --~~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~ 344 (417)
T 1izo_A 272 --NSREREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE----E 344 (417)
T ss_dssp --CHHHHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC----C
T ss_pred --CCHHHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC----C
Confidence 479999999999999999998 459999999999999999999999999999999999999999999999753 2
Q ss_pred CccceeccCCC----CCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 433 HNFELLPFGSG----RRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 433 ~~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
.+..|+|||+| +|.|+|++||++|++++++.|+++|+|++.++. .... ...+++.|++++.|++++|+
T Consensus 345 ~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~r~ 416 (417)
T 1izo_A 345 NLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS----LHYS-LARMPSLPESGFVMSGIRRK 416 (417)
T ss_dssp CSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC----CCCC-SSSSSCCCTTCCEEEEEEEC
T ss_pred CCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC----cCcc-cccCCCCCCCCceEeeeeCC
Confidence 45689999999 599999999999999999999999999987542 2221 23466789999999999985
No 28
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=1.9e-60 Score=473.86 Aligned_cols=422 Identities=15% Similarity=0.173 Sum_probs=290.6
Q ss_pred cCCCCCCCCCCC-CceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh
Q 048184 42 KINLLPPPGPKP-WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW 120 (512)
Q Consensus 42 ~~~~~~ppgP~~-~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~ 120 (512)
+...+.||||++ +|++||++.+..+++.++.+++++|||||++++++.++++++|++++++++.++. .+..++.....
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~~~~ 92 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYAQVL 92 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHHHHH
Confidence 334467999998 9999999988778999999999999999999999999999999999999998653 23332221111
Q ss_pred hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184 121 KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL 200 (512)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~ 200 (512)
....+ +.+++.. +++.| |+.+ .+.|++..++.+.+.+.+++.++++.+..... ...+..+++..++..+++
T Consensus 93 ~~~~~-g~~~~~~-~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 163 (475)
T 3b98_A 93 MKRIF-NMILPSH-NPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLK---TSEWKKDGLFNLCYSLLF 163 (475)
T ss_dssp HHHTT-CCCCTTC-CHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCS---SCSCEEEEHHHHHHHHHH
T ss_pred HHHHh-CCCCCCC-ChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccC---CCCceeehHHHHHHHHHH
Confidence 11112 2344433 35554 5666 68999999999999999999888876543210 113446889999999999
Q ss_pred HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccc-ccccchHHHHHHHHHHHHHHHHHHHHHH
Q 048184 201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAF-LDLQGNIKRMKAVKKKIDKFYEHVLHEH 279 (512)
Q Consensus 201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 279 (512)
++++...||.+... ...+....+.+... ...+|++.+ +.+....++..+..+.+.+.+. +++
T Consensus 164 ~~~~~~~~g~~~~~--------~~~~~~~~~~~~~~------~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 226 (475)
T 3b98_A 164 KTGYLTVFGAENNN--------SAALTQIYEEFRRF------DKLLPKLARTTVNKEEKQIASAAREKLWKWLT---PSG 226 (475)
T ss_dssp HHHHHHHHCCTTSC--------HHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHS---CTT
T ss_pred HHhhhheeCCcccc--------chhcHHHHHHHHHH------HhhhHHHHHHhcChhhhHHHHHHHHHHHHHHH---HHH
Confidence 99998889854211 13333333333221 123454322 1111112233333332222211 111
Q ss_pred HHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-------------------HHhcCHHHHHHHHHHHHH
Q 048184 280 ERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-------------------QLLKNPEVIQKATDELDR 340 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-------------------~L~~~p~~~~~l~~Ei~~ 340 (512)
.+ ......|+++.+++...+.+ .++++++..++ +|+.||++|+++++|++
T Consensus 227 ~~-------~~~~~~d~l~~ll~~~~~~~---~~~~~~i~~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~- 295 (475)
T 3b98_A 227 LD-------RKPREQSWLGSYVKQLQDEG---IDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ- 295 (475)
T ss_dssp SC-------CCCCTTSHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-
T ss_pred hh-------ccccccHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh-
Confidence 11 12345789999987643321 45666664211 99999999999999999
Q ss_pred HhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee-----cCcccCCCCEEEEehhh-hccCCCCCCC
Q 048184 341 VIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV-----AGSNILKNSRVIVNVWA-IGRDPTLWEK 414 (512)
Q Consensus 341 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~ 414 (512)
.+ +..++.+++++||||+|||+|+||++|+ +. .+|.+.+|+++ +||.||||+.|+++.++ +||||++|+|
T Consensus 296 -~~-~~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~d 371 (475)
T 3b98_A 296 -GG-KHLRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQ 371 (475)
T ss_dssp --------------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSS
T ss_pred -cC-CCCCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCC
Confidence 23 3346999999999999999999999986 55 56999999999 88999999999999999 9999999999
Q ss_pred CCCCCCCCCCCCCCCc--------ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCccc-
Q 048184 415 PNEFCPERFVGKEIDV--------VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEE- 485 (512)
Q Consensus 415 p~~F~p~R~l~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~- 485 (512)
|++||||||+++++.. ...+..|+|||+|+|.|||++||++|++++++.||++|||+++++... .++.+.
T Consensus 372 P~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~ 450 (475)
T 3b98_A 372 PEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNAT-VPLVDPS 450 (475)
T ss_dssp TTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCC-CCCBCGG
T ss_pred cccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCC-CCCCCcc
Confidence 9999999999754321 113468999999999999999999999999999999999999866311 122221
Q ss_pred -ccCcccccCCCceeeeccCCC
Q 048184 486 -RFGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 486 -~~~~~~~~~~~~~v~~~~R~~ 506 (512)
....+.+|+.++.|++++|++
T Consensus 451 ~~~~~~~~p~~~~~~~~~~R~~ 472 (475)
T 3b98_A 451 RYGFGILQPAGDLEIRYRIRFH 472 (475)
T ss_dssp GTBEEECCBSSCCEEEEEEC--
T ss_pred cccccccCCCCCceEEEEeccc
Confidence 223466788899999999965
No 29
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=4.3e-58 Score=447.59 Aligned_cols=385 Identities=14% Similarity=0.211 Sum_probs=298.9
Q ss_pred CCCCCCCceeeeccccCCCccHHHHHHHhhc-CCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhh-hhhhcc
Q 048184 48 PPGPKPWHLIVNLNLIGQNLHVSLQSLSQKY-GPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLA-WKHANY 125 (512)
Q Consensus 48 ppgP~~~p~lG~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~ 125 (512)
|||| |++||++.+..+++.++.+++++| ||||++.+++.+++++++++.++ ++.+. ..|.+++.... .....+
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence 6776 899999988778999999999999 79999998888999999999987 66543 45665432211 111112
Q ss_pred CCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHH
Q 048184 126 NYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSR 205 (512)
Q Consensus 126 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~ 205 (512)
+..+++ ..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.|.. ++++|+.+++..+++++++.
T Consensus 79 g~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~---------~~~vdl~~~~~~~~~~vi~~ 147 (415)
T 3awm_A 79 GQGGVQ-GLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTR---------KGEIVFYDELHEPLTRAVCA 147 (415)
T ss_dssp CSSSGG-GCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHH---------HSEEEHHHHHHHHHHHHHHH
T ss_pred CCccee-ecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhcc---------CCcEeHHHHHHHHHHHHHHH
Confidence 223444 44599999999998 79999999999999999999999999964 34799999999999999999
Q ss_pred HHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 048184 206 MLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKR 285 (512)
Q Consensus 206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 285 (512)
+ ||.+++..+ ...+...+..+...... ..| ...+..++.+.+.+++.++|+++++...
T Consensus 148 ~-~G~~~~~~~------~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~- 205 (415)
T 3awm_A 148 W-AGVPLPDDE------AGNRAGELRALFDAAGS-----ASP---------RHLWSRLARRRVDAWAKRIIEGIRAGSI- 205 (415)
T ss_dssp H-HTCCCCGGG------HHHHHHHHHHHHHSTTC-----SSH---------HHHHHHHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred H-cCCCCCcch------HHHHHHHHHHHHHHhcc-----cCc---------hHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 8 898875421 23333333333332110 011 1245667788899999999999887641
Q ss_pred ccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-------------------HHhcCHHHHHHHHHHHHHHhcCCc
Q 048184 286 KLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-------------------QLLKNPEVIQKATDELDRVIGRNK 346 (512)
Q Consensus 286 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-------------------~L~~~p~~~~~l~~Ei~~~~~~~~ 346 (512)
.....|+++.|++...++ +..++++++...+ +|++||++|+++++|
T Consensus 206 ----~~~~~d~l~~ll~~~~~~--g~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e--------- 270 (415)
T 3awm_A 206 ----GSGSGTAAYAIAWHRDRH--DDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQ--------- 270 (415)
T ss_dssp ----CCCTTSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------
T ss_pred ----cCCCCCHHHHHHhhhhcc--CCCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------
Confidence 223568999999875433 2246666443322 899999999999996
Q ss_pred cccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCC
Q 048184 347 WVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGK 426 (512)
Q Consensus 347 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~ 426 (512)
+||++|||+|+||++|+++. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||+++
T Consensus 271 ---------~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~ 340 (415)
T 3awm_A 271 ---------PDYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340 (415)
T ss_dssp ---------TTHHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGC
T ss_pred ---------HHHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCC
Confidence 58999999999999999998 45999999999999999999999999999999999999999999999875
Q ss_pred CCCcccCccceeccCCC----CCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeec
Q 048184 427 EIDVVGHNFELLPFGSG----RRMCVGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPK 502 (512)
Q Consensus 427 ~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 502 (512)
+ ..+..|+|||+| +|.|+|++||++|++++++.|+++|++++.++. ..+. ...+++.|++++.|+++
T Consensus 341 ~----~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~ 411 (415)
T 3awm_A 341 D----EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD----LSID-FARLPALPKSGFVMRNV 411 (415)
T ss_dssp C----CCSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC----CCBC-TTSSSCCBTTCCEEEEE
T ss_pred C----CCCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC----CCcC-cCCCccccCCCceEEEE
Confidence 3 245689999999 599999999999999999999999999987552 2222 23567789999999998
Q ss_pred cC
Q 048184 503 PR 504 (512)
Q Consensus 503 ~R 504 (512)
+.
T Consensus 412 ~~ 413 (415)
T 3awm_A 412 HI 413 (415)
T ss_dssp ES
T ss_pred eC
Confidence 64
No 30
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=5.8e-57 Score=438.01 Aligned_cols=354 Identities=14% Similarity=0.194 Sum_probs=279.0
Q ss_pred CCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC-CEeEEEcCCHHHHHHHHHhcc-cccCCCCchhhhhh--
Q 048184 47 PPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-LETVVVGSSAEVAELLLKTYD-VTFASRPPLLAWKH-- 122 (512)
Q Consensus 47 ~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~vvi~d~~~~~~i~~~~~-~~~~~~~~~~~~~~-- 122 (512)
.||||+++|++|++.. +++..+.+|+ +||||+++.++ |.+.++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999765 7899999996 69999999874 566778999999999998652 22333332211110
Q ss_pred --hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHH
Q 048184 123 --ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNL 200 (512)
Q Consensus 123 --~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~ 200 (512)
...++.++++. +|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+..... +++++|+...+...+.
T Consensus 78 ~~~~~~~~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~-----~~~~~d~~~~~~~~~~ 150 (404)
T 1jfb_A 78 KQAAKAKPTFVDM-DPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGC-----ANGPVDLVKEFALPVP 150 (404)
T ss_dssp HHHTTSCCCGGGC-CTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCS-----TTSCEEHHHHTTTHHH
T ss_pred cchhcccCccccc-CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCccHHHHHHHHHH
Confidence 11222344444 599999999998 79999999999999999999999999986533 3567999999999999
Q ss_pred HHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 048184 201 AIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHE 280 (512)
Q Consensus 201 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 280 (512)
++++..+||.+++.. +.+......+.. ..| ..++..++.+.+.+++.++|++++
T Consensus 151 ~~i~~~~~G~~~~~~--------~~~~~~~~~~~~---------~~~---------~~~~~~~~~~~~~~~~~~~i~~r~ 204 (404)
T 1jfb_A 151 SYIIYTLLGVPFNDL--------EYLTQQNAIRTN---------GSS---------TAREASAANQELLDYLAILVEQRL 204 (404)
T ss_dssp HHHHHHHHTCCGGGH--------HHHHHHHHHHHC---------TTS---------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHH--------HHHHHHHHHHhc---------cCc---------chHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999876421 222222221111 001 124566778889999999999887
Q ss_pred HhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHH
Q 048184 281 RHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDR 340 (512)
Q Consensus 281 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~ 340 (512)
++. ..|+++.|+++..++ ..++++++..++ +|++||++|+|++++
T Consensus 205 ~~~---------~~d~l~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~--- 269 (404)
T 1jfb_A 205 VEP---------KDDIISKLCTEQVKP---GNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN--- 269 (404)
T ss_dssp HSC---------CSSHHHHHHHHTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC---
T ss_pred hCC---------CCcHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC---
Confidence 543 468999999654332 268888887655 899999999999982
Q ss_pred HhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 048184 341 VIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCP 420 (512)
Q Consensus 341 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p 420 (512)
.+|++|||+|+||++|+++...+|++.+|++++||.||||+.|.++.+++||||++|+||++|+|
T Consensus 270 ---------------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P 334 (404)
T 1jfb_A 270 ---------------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNM 334 (404)
T ss_dssp ---------------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCT
T ss_pred ---------------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCC
Confidence 37999999999999999996677999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCC
Q 048184 421 ERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGD 475 (512)
Q Consensus 421 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 475 (512)
|||+++ ..++|||.|+|.|+|++||++|++++++.|+++| +++++.+
T Consensus 335 eRf~~~--------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 335 NRKWPP--------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp TCCCCS--------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCCCC--------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 998753 2589999999999999999999999999999999 7999653
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=5.5e-57 Score=437.45 Aligned_cols=365 Identities=18% Similarity=0.223 Sum_probs=289.0
Q ss_pred CCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEe----c-CC-EeEEEcCCHHHHHHHH-HhcccccCCCCch
Q 048184 45 LLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLK----F-GL-ETVVVGSSAEVAELLL-KTYDVTFASRPPL 117 (512)
Q Consensus 45 ~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~----~-~~-~~~vvi~d~~~~~~i~-~~~~~~~~~~~~~ 117 (512)
.+.||||+++|+. +..+++..+.+| ++|||||+++ + ++ +++++|+|++.+++|+ .+. .|.+++..
T Consensus 9 ~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~ 80 (406)
T 1ued_A 9 APLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQF 80 (406)
T ss_dssp CCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC
T ss_pred CCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccc
Confidence 3568999999987 567899999999 9999999999 6 78 8999999999999999 543 35554431
Q ss_pred hhhh-hhc---cCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHH
Q 048184 118 LAWK-HAN---YNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKE 193 (512)
Q Consensus 118 ~~~~-~~~---~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~ 193 (512)
.... ... ..+.++++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.. .++++|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~-~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~g~~~d~~~ 150 (406)
T 1ued_A 81 TQSKSGAHVEAQFVGQISTY-DPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA--------EGPSADLQG 150 (406)
T ss_dssp ---------CGGGTTCGGGC-CTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH--------HCTTEEHHH
T ss_pred cccccccccccccccccccC-CCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCeeHHH
Confidence 1110 010 012345444 699999999999 79999999999999999999999999974 245799999
Q ss_pred HHHH-HHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHH
Q 048184 194 RLFM-FNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFY 272 (512)
Q Consensus 194 ~~~~-~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~ 272 (512)
++.. +++++++ .+||.+.+.. +.+...+..+... . . ..++..++.+.+.+++
T Consensus 151 ~~~~~~~~~vi~-~~~G~~~~~~--------~~~~~~~~~~~~~----~----~----------~~~~~~~~~~~~~~~~ 203 (406)
T 1ued_A 151 LFADPVGAHALC-ELLGIPRDDQ--------REFVRRIRRNADL----S----R----------GLKARAADSAAFNRYL 203 (406)
T ss_dssp HTHHHHHHHHHH-HHHTCCHHHH--------HHHHHHHHHCC-----------C----------CHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHH-HHcCCCHHHH--------HHHHHHHHHHHhc----c----C----------CHHHHHHHHHHHHHHH
Confidence 8875 9999999 5799875311 3344443332210 0 0 0245677788899999
Q ss_pred HHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHH
Q 048184 273 EHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQ 332 (512)
Q Consensus 273 ~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~ 332 (512)
.++|++++++. ..|+++.|+++. +..++++++..++ +|++||++|+
T Consensus 204 ~~~i~~r~~~~---------~~d~l~~ll~~~-----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~ 269 (406)
T 1ued_A 204 DNLLARQRADP---------DDGLLGMIVRDH-----GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIE 269 (406)
T ss_dssp HHHHHHHHHSC---------CSSHHHHHHHHH-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHhCC---------CCCHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHH
Confidence 99999887543 368999999765 1257888877655 9999999999
Q ss_pred HHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCC
Q 048184 333 KATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLW 412 (512)
Q Consensus 333 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~ 412 (512)
|+++|++ |++|||+|+||++|+++...+|++.+|++++||.||||+.|.++.+++||||++|
T Consensus 270 ~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~ 331 (406)
T 1ued_A 270 LLFESPE------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT 331 (406)
T ss_dssp HHHHCHH------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS
T ss_pred HHHhCHH------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhC
Confidence 9999864 6999999999999999976679999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCccc
Q 048184 413 EKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRT 491 (512)
Q Consensus 413 ~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~ 491 (512)
+||++|+|||| +..++|||.|+|.|+|++||++|++++++.|+++| +++++.+. +++.+ ..+.++
T Consensus 332 ~dp~~F~PeR~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~--~~~~~~ 397 (406)
T 1ued_A 332 PDPDVLDANRA----------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPI--EEVKY--RSAFVD 397 (406)
T ss_dssp SSTTSCCTTSC----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CCSSSC
T ss_pred CChhhcCCCCC----------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCc--ccccc--cccccc
Confidence 99999999998 13689999999999999999999999999999999 79997432 22232 335566
Q ss_pred ccCCCceeee
Q 048184 492 SRKNPLLVVP 501 (512)
Q Consensus 492 ~~~~~~~v~~ 501 (512)
++ .+++|++
T Consensus 398 ~~-~~lpv~~ 406 (406)
T 1ued_A 398 CP-DQVPVTW 406 (406)
T ss_dssp CB-SCCEEEC
T ss_pred cC-CeeeeeC
Confidence 77 7888764
No 32
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=3.1e-58 Score=444.13 Aligned_cols=383 Identities=16% Similarity=0.177 Sum_probs=284.1
Q ss_pred CCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCC-chhhhhhhccCCc
Q 048184 50 GPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRP-PLLAWKHANYNYL 128 (512)
Q Consensus 50 gP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 128 (512)
++..+|++||++++..+++.++.+++++|||||+ ++++.++++++||+++++++.++ .|.+++ ......... +.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 4556899999998867789999999999999999 88998999999999999999865 787775 222222221 34
Q ss_pred ccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHh
Q 048184 129 VMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLF 208 (512)
Q Consensus 129 ~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f 208 (512)
++++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+. ++++|+.+++..+++++++.++|
T Consensus 78 ~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----------~~~~dl~~~~~~~~~~vi~~~~f 145 (389)
T 1n97_A 78 GLLTD-WGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR----------GEERDLDHEMLALSLRLLGRALF 145 (389)
T ss_dssp STTTC-CHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC----------SCCEEHHHHHHHHHHHHHHHHHH
T ss_pred ccccC-CcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc----------CCcCcHHHHHHHHHHHHHHHHHc
Confidence 55555 599999999999 7999999999999999999999998774 24799999999999999999999
Q ss_pred ccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 048184 209 GKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLF 288 (512)
Q Consensus 209 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 288 (512)
|.+++. .+...+..+...... ..++++.+++ ....++..++.+.+.+++.++++++.-.
T Consensus 146 G~~~~~----------~~~~~~~~~~~~~~~----~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~rll~------ 204 (389)
T 1n97_A 146 GKPLSP----------SLAEHALKALDRIMA----QTRSPLALLD-LAAEARFRKDRGALYREAEALIVHPPLS------ 204 (389)
T ss_dssp SSCCCH----------HHHHHHHHHHHHHHH----HHHCGGGGGC-HHHHHHHHHHHHHHHHHHGGGTTSTTGG------
T ss_pred CCcchH----------HHHHHHHHHHHHHHH----HHhhHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 998861 233333332221110 0111112222 1223455555666666666555443000
Q ss_pred cCCCcccHHHHHhcccCCccccccccHHHHHHHH-HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhh
Q 048184 289 KEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVM 367 (512)
Q Consensus 289 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Etl 367 (512)
.-...++.+.++..... +.+.+...+...+ +|+.||++|+++++|++.+. |||+|+|
T Consensus 205 -~l~~~~l~~~~~~~~~a---G~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~i~E~l 262 (389)
T 1n97_A 205 -HLPRERALSEAVTLLVA---GHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQEAL 262 (389)
T ss_dssp -GSCHHHHHHHHHHHHHH---HSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHc---CchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HHHHHHH
Confidence 00111111111111000 0011222222222 99999999999999999763 9999999
Q ss_pred hcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCC
Q 048184 368 RLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMC 447 (512)
Q Consensus 368 Rl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C 447 (512)
|++|+++.. +|.+.+|++++||.||||+.|.++.+++|+| +|+||++|+||||+++. ...+..++|||+|+|.|
T Consensus 263 Rl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~FG~G~r~C 336 (389)
T 1n97_A 263 RLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPFGLGQRLC 336 (389)
T ss_dssp HHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTTCCSTTCC
T ss_pred hcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCCCCCCCCC
Confidence 999999986 6999999999999999999999999999999 99999999999998641 22456899999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 448 VGYALGLKIVQSTLANLLHGFEWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 448 ~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
+|++||++|++++++.|+++|++++.++. .+ ..+.++.|+.+++|++++|.
T Consensus 337 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~----~~~~~~~p~~~~~v~~~~~~ 387 (389)
T 1n97_A 337 LGRDFALLEGPIVLRAFFRRFRLDPLPFP---RV----LAQVTLRPEGGLPARPREEV 387 (389)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCBCCCCCCC---CE----EESSSEEETTCCEECCBC--
T ss_pred chHHHHHHHHHHHHHHHHHhceEEeCCCC---cc----cceEEeeeCCCceEEEeecc
Confidence 99999999999999999999999998663 21 34677889889999999974
No 33
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=1.6e-55 Score=427.34 Aligned_cols=362 Identities=18% Similarity=0.213 Sum_probs=289.5
Q ss_pred ccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh-----hhhccCCcccccCCCC
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW-----KHANYNYLVMPGAPYG 136 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g 136 (512)
.+..+++.++.++ ++|||||++++++.++++|++++.+++++.++ .|++++..... ......+.++++. +|
T Consensus 17 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g 92 (411)
T 3a4g_A 17 TFWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTPMMILM-DP 92 (411)
T ss_dssp GGTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSCCGGGC-CT
T ss_pred hhhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC--CcccccccccccccccccCcccccccccC-Cc
Confidence 3567899999999 99999999999999999999999999999865 27776543210 1111123455444 59
Q ss_pred hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHH-HHHHHHHHHHHHHHhccccCcc
Q 048184 137 PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKE-RLFMFNLAIMSRMLFGKRYTEE 215 (512)
Q Consensus 137 ~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fG~~~~~~ 215 (512)
+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.. ++++|+.. +...+++++++.+ ||.+++..
T Consensus 93 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~ 161 (411)
T 3a4g_A 93 PDHTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT---------DGPVDLMREYAFQIPVQVICEL-LGVPAEDR 161 (411)
T ss_dssp THHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS---------SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGH
T ss_pred hHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh---------cCCccHHHHHHHHhHHHHHHHH-hCCCHHHH
Confidence 9999999999 79999999999999999999999998852 25799975 4578999999975 99876421
Q ss_pred cccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 048184 216 DENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTND 295 (512)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d 295 (512)
..+......+... .| + ++..++.+.+.+++.++|+++++.. ..|
T Consensus 162 --------~~~~~~~~~~~~~---------~p------~----~~~~~~~~~~~~~~~~~i~~r~~~~---------~~d 205 (411)
T 3a4g_A 162 --------DDFSAWSSVLVDD---------SP------A----DDKNAAMGKLHGYLSDLLERKRTEP---------DDA 205 (411)
T ss_dssp --------HHHHHHHHHHTTS---------SC------T----TTHHHHHHHHHHHHHHHHHHHHHSC---------CSS
T ss_pred --------HHHHHHHHHHhcc---------CC------H----HHHHHHHHHHHHHHHHHHHHHHhCC---------CCC
Confidence 4455544443321 12 1 2345677888999999999887643 358
Q ss_pred HHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCC
Q 048184 296 IVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVN 355 (512)
Q Consensus 296 ~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~ 355 (512)
+++.|+++..++ +..++++++..++ +|++||++|+|+++|++
T Consensus 206 ~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------- 267 (411)
T 3a4g_A 206 LLSSLLAVSDED--GDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS---------------- 267 (411)
T ss_dssp HHHHHHHCCCTT--CCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------------
T ss_pred HHHHHHHhhccC--CCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH----------------
Confidence 999999875422 3368888887665 89999999999999853
Q ss_pred ChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 356 LPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 356 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||. .
T Consensus 268 --~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~ 335 (411)
T 3a4g_A 268 --LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------S 335 (411)
T ss_dssp --GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------T
T ss_pred --HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------C
Confidence 8999999999999999966679999999999999999999999999999999999999999999983 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCCCCC
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRLPLD 508 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~ 508 (512)
.++|||+|+|.|+|++||+.|++++++.|+++| +++++++. ..+.+ ..+.+.++..+++|++++|..+.
T Consensus 336 ~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~~~r~~~~ 405 (411)
T 3a4g_A 336 GGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGL--DELVY--RESTLVRGLSRMPVTMGPRSALE 405 (411)
T ss_dssp TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CCCTTBCCBSCCEEECCCCCC--
T ss_pred CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCc--ccccc--ccCccccCcceeEEEecCcchhh
Confidence 589999999999999999999999999999999 79997542 22233 23455677789999999998764
No 34
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=3.2e-55 Score=425.85 Aligned_cols=371 Identities=18% Similarity=0.215 Sum_probs=290.1
Q ss_pred CCCCCCCCCceeeeccccCCCccHHHHHHHhhc-CCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh
Q 048184 46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKY-GPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA 123 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~ky-G~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~ 123 (512)
..||+|+++|.+.....+..+++..+.+| ++| ||||++++ ++.++++|+|++++++|+.++ .+.+++....+...
T Consensus 5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~ 81 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPAT 81 (412)
T ss_dssp ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCCC
T ss_pred CCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccccccc
Confidence 45788888887744455678899999999 788 99999997 888999999999999999864 24444321111110
Q ss_pred -----cc--CCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH
Q 048184 124 -----NY--NYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF 196 (512)
Q Consensus 124 -----~~--~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~ 196 (512)
.. .+.++++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.. .++++|+.+++.
T Consensus 82 ~~~~~~~~~~~~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~g~~~d~~~~~~ 151 (412)
T 2zbx_A 82 SPRFEAVRESPQAFIGL-DPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA--------AGPTADLVSQFA 151 (412)
T ss_dssp SGGGC----CCCCGGGC-CTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH--------HCSCEEHHHHTT
T ss_pred ccccccccccccccccC-CcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCccHHHHHH
Confidence 00 12344444 699999999999 79999999999999999999999999974 245799999886
Q ss_pred -HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHH
Q 048184 197 -MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHV 275 (512)
Q Consensus 197 -~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 275 (512)
.+++++++. +||.+.+.. +.+...+..++... .. ++..++.+.+.+++.++
T Consensus 152 ~~~~~~vi~~-~~G~~~~~~--------~~~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~~~~ 203 (412)
T 2zbx_A 152 LPVPSMVICR-LLGVPYADH--------EFFQDASKRLVQST------------------DA-QSALTARNDLAGYLDGL 203 (412)
T ss_dssp THHHHHHHHH-HHTCCGGGH--------HHHHHHHHHHHHCS------------------SH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCCHHHH--------HHHHHHHHHHhccC------------------cH-HHHHHHHHHHHHHHHHH
Confidence 489999996 799876421 44555555444310 01 45667788899999999
Q ss_pred HHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHH
Q 048184 276 LHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKAT 335 (512)
Q Consensus 276 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~ 335 (512)
|+++++.. ..|+++.|+++..+ +..++++++..++ +|++||++|+|++
T Consensus 204 i~~r~~~~---------~~d~l~~ll~~~~~---~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~ 271 (412)
T 2zbx_A 204 ITQFQTEP---------GAGLVGALVADQLA---NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR 271 (412)
T ss_dssp HHHHHHSC---------CSSHHHHHHHTTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHhCC---------CCCHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 99887653 36899999987643 2368888887655 9999999999999
Q ss_pred HHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCC
Q 048184 336 DELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKP 415 (512)
Q Consensus 336 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p 415 (512)
+|++ |++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+||
T Consensus 272 ~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP 333 (412)
T 2zbx_A 272 ADRS------------------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDP 333 (412)
T ss_dssp HCGG------------------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSST
T ss_pred hChH------------------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCc
Confidence 9753 7999999999999999966679999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccC
Q 048184 416 NEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRK 494 (512)
Q Consensus 416 ~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (512)
++|+|||| +..++|||.|+|.|+|++||++|++++++.|+++| +++++.+. ++..+ ..+.+.+..
T Consensus 334 ~~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~~~~~~g~ 399 (412)
T 2zbx_A 334 DALDIHRS----------ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPV--EQLVL--RPGTTIQGV 399 (412)
T ss_dssp TSCCTTSC----------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGSCB--CCTTSCCCB
T ss_pred cccCCCCC----------CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCc--cccee--ccccccCCc
Confidence 99999997 13689999999999999999999999999999999 89997542 22233 223334444
Q ss_pred CCceeee
Q 048184 495 NPLLVVP 501 (512)
Q Consensus 495 ~~~~v~~ 501 (512)
..++|+.
T Consensus 400 ~~lpv~~ 406 (412)
T 2zbx_A 400 NELPVTW 406 (412)
T ss_dssp SCCEEEC
T ss_pred ceeeeec
Confidence 4666654
No 35
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=4e-55 Score=423.96 Aligned_cols=360 Identities=17% Similarity=0.215 Sum_probs=288.7
Q ss_pred ccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCc--h-hhhhhh-c-cCCcccccCCC
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPP--L-LAWKHA-N-YNYLVMPGAPY 135 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~--~-~~~~~~-~-~~~~~~~~~~~ 135 (512)
.+..+++.++.++ ++|||||++++ +++++++++|++++++++.++ .|.+++. . ...... . ..+.++++ .+
T Consensus 16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 91 (403)
T 3aba_A 16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLW-QD 91 (403)
T ss_dssp SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTT-CC
T ss_pred ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccc-CC
Confidence 4567899999999 89999999997 889999999999999999864 4666642 1 111001 1 12344544 46
Q ss_pred ChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCc
Q 048184 136 GPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTE 214 (512)
Q Consensus 136 g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~ 214 (512)
|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.|... ++++|+..++ ..+++++++. +||.+.+.
T Consensus 92 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 161 (403)
T 3aba_A 92 EPEHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEAR--------GGPVDLVKTFANAVPSMVISD-LFGVPVER 161 (403)
T ss_dssp TTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHHH--------CSCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred chhHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCccHHHHHHHHHHHHHHHH-HcCCCHHH
Confidence 99999999999 799999999999999999999999999741 3469998766 5799999997 79987642
Q ss_pred ccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcc
Q 048184 215 EDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTN 294 (512)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 294 (512)
. +.+....+.+.... .| + ++..++.+.+.+++.++|++++++. ..
T Consensus 162 ~--------~~~~~~~~~~~~~~--------~~------p----~~~~~~~~~~~~~~~~~i~~r~~~~---------~~ 206 (403)
T 3aba_A 162 R--------AEFQDIAEAMMRVD--------QD------A----AATEAAGMRLGGLLYQLVQERRANP---------GD 206 (403)
T ss_dssp H--------HHHHHHHHHHSBSS--------SC------H----HHHHHHHHHHHHHHHHHHHHHHHSC---------CS
T ss_pred H--------HHHHHHHHHHHhcc--------Cc------H----HHHHHHHHHHHHHHHHHHHHHHhCC---------CC
Confidence 1 44544444433211 01 1 4566778889999999999887653 35
Q ss_pred cHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCC
Q 048184 295 DIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIV 354 (512)
Q Consensus 295 d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~ 354 (512)
|+++.|+++..+ +..++++++..++ +|++||++|+|+++|++
T Consensus 207 dll~~ll~~~~~---~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 268 (403)
T 3aba_A 207 DLISALITTEDP---DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS--------------- 268 (403)
T ss_dssp SHHHHHHTSCCT---TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------
T ss_pred CHHHHHHhhccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------
Confidence 899999987542 3368888887665 89999999999999853
Q ss_pred CChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCc
Q 048184 355 NLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHN 434 (512)
Q Consensus 355 ~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~ 434 (512)
|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.
T Consensus 269 ---~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------- 335 (403)
T 3aba_A 269 ---LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP---------- 335 (403)
T ss_dssp ---GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------
T ss_pred ---HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------
Confidence 7999999999999999965679999999999999999999999999999999999999999999982
Q ss_pred cceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 435 FELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 435 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
..++|||+|+|.|+|++||++|++++++.|+++| +++++.+. .++.+ ..+.+.++..+++|++++|.
T Consensus 336 ~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 336 APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPV--EELRF--RHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCB--CTTBSSCCBSCCEEECCCCC
T ss_pred CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCc--ccccc--ccCcccCCcceeEEEecCCC
Confidence 3689999999999999999999999999999999 69987542 12222 23456677889999999984
No 36
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=1.5e-55 Score=430.75 Aligned_cols=383 Identities=16% Similarity=0.206 Sum_probs=290.5
Q ss_pred CCCCCCCCCCceeeeccccC-----CCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCc-h
Q 048184 45 LLPPPGPKPWHLIVNLNLIG-----QNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPP-L 117 (512)
Q Consensus 45 ~~~ppgP~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~-~ 117 (512)
.+.||| ++|++.... .+++..+.++++ ||||+++++ |+.++++|++++++++++++. ..|+.++. .
T Consensus 5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~ 77 (428)
T 1cpt_A 5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSE 77 (428)
T ss_dssp CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCS
T ss_pred cccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccc
Confidence 356888 888765542 457889998876 799999997 678999999999999999754 56877764 2
Q ss_pred hhh---h-h-h-c-cC-----CcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 048184 118 LAW---K-H-A-N-YN-----YLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSS 185 (512)
Q Consensus 118 ~~~---~-~-~-~-~~-----~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 185 (512)
... . . . . .+ +.++++. +|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+...
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~~~l~~~-~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-------- 147 (428)
T 1cpt_A 78 ILYDQNNEAFMRSISGGCPHVIDSLTSM-DPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDF-------- 147 (428)
T ss_dssp SCCCHHHHHHHHHHTTTSSCSSCCGGGC-CTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTS--------
T ss_pred cCCcccccchhccccccccccccccccC-ChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 211 1 1 1 0 11 1345444 599999999999 799999999999999999999999999742
Q ss_pred CCceeHHHH-HHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHH
Q 048184 186 STPVHLKER-LFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAV 264 (512)
Q Consensus 186 ~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~ 264 (512)
++.+|+... ...+++++++.+ ||.+++.. ..+....+.+..... .....+|++.++.+ ...++..++
T Consensus 148 ~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~-~~~~~~~~~ 215 (428)
T 1cpt_A 148 DGECDFMTDCALYYPLHVVMTA-LGVPEDDE--------PLMLKLTQDFFGVHE--PDEQAVAAPRQSAD-EAARRFHET 215 (428)
T ss_dssp SSEEEHHHHTTTTHHHHHHHHH-HTCCGGGH--------HHHHHHHHTTTCC-------------------CHHHHHHHH
T ss_pred CCCeehHHHHHhhhHHHHHHHH-cCCCHhHH--------HHHHHHHHHHHhccc--ccccccccccccch-hhHHHHHHH
Confidence 257999855 567999999999 99876432 334444433332111 11123455543311 223566778
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HH
Q 048184 265 KKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QL 324 (512)
Q Consensus 265 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L 324 (512)
.+.+.+++.++|++++++. ..|+++.|+++..+ +..++++++..++ +|
T Consensus 216 ~~~~~~~~~~~i~~r~~~~---------~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L 283 (428)
T 1cpt_A 216 IATFYDYFNGFTVDRRSCP---------KDDVMSLLANSKLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGL 283 (428)
T ss_dssp HHHHHHHHHHHHHHHTTSC---------CSSHHHHHHHCBSS---SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC---------CCcHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999998887532 36899999987543 2368888887665 89
Q ss_pred hcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhh
Q 048184 325 LKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWA 404 (512)
Q Consensus 325 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~ 404 (512)
++||++|+|+++|++ |++|||+|+||++|+++. .+|++.+|++++||.||||+.|+++.++
T Consensus 284 ~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~ 344 (428)
T 1cpt_A 284 SRNPEQLALAKSDPA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPS 344 (428)
T ss_dssp HHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHH
T ss_pred HhCHHHHHHHHHhHH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHH
Confidence 999999999999974 899999999999999996 5699999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCc
Q 048184 405 IGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDM 483 (512)
Q Consensus 405 ~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~ 483 (512)
+||||++|+||++|+||||.+ .++|||+|+|.|+|++||++|++++++.|+++|+ +++.+.. .+
T Consensus 345 ~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-----~~ 409 (428)
T 1cpt_A 345 ANRDEEVFSNPDEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP-----RL 409 (428)
T ss_dssp HTTCTTTCSSTTSCCTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCC-----EE
T ss_pred hCCChhhCCChhhcCCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCc-----cc
Confidence 999999999999999999941 3899999999999999999999999999999997 8886321 12
Q ss_pred ccccCcccccCCCceeeeccC
Q 048184 484 EERFGGRTSRKNPLLVVPKPR 504 (512)
Q Consensus 484 ~~~~~~~~~~~~~~~v~~~~R 504 (512)
....+.+...+++|+++||
T Consensus 410 --~~~~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 410 --VATNFVGGPKNVPIRFTKA 428 (428)
T ss_dssp --CCCSSBCSEEECEEEEEEC
T ss_pred --ccCccccCcceeeEEeeCC
Confidence 1223344445889998876
No 37
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=3.3e-55 Score=425.30 Aligned_cols=373 Identities=15% Similarity=0.155 Sum_probs=296.1
Q ss_pred CCCCCCCCCCCcee--eeccc-----cCCCccHHHHHHHhhcC--CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCC
Q 048184 44 NLLPPPGPKPWHLI--VNLNL-----IGQNLHVSLQSLSQKYG--PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASR 114 (512)
Q Consensus 44 ~~~~ppgP~~~p~l--G~~~~-----~~~~~~~~~~~~~~kyG--~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~ 114 (512)
+.+.||||.+.|.. +.+-. +..+++.++.+|+ +|| |||++++.| ++++|+|++++++++.+ ...|.++
T Consensus 9 ~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~~~ 85 (415)
T 2zwu_A 9 NANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFSSE 85 (415)
T ss_dssp --CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEETT
T ss_pred ccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccCCC
Confidence 44789999999864 43221 2457889999995 799 999999433 68999999999999974 4568877
Q ss_pred C-chhhhhhhccCCcc-cccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHH
Q 048184 115 P-PLLAWKHANYNYLV-MPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLK 192 (512)
Q Consensus 115 ~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~ 192 (512)
+ ...... ... +.+ +++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|... +++|+.
T Consensus 86 ~~~~~~~~-~~~-~~~~l~~~-~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---------~~~d~~ 152 (415)
T 2zwu_A 86 CPFIPREA-GEA-YDFIPTSM-DPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQ---------GQCNFT 152 (415)
T ss_dssp SCSSSHHH-HHH-CCCTTTTC-CTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGG---------TEEEHH
T ss_pred cccCCCCc-ccc-ccccCccC-CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc---------CCccHH
Confidence 6 222111 111 234 5544 599999999999 799999999999999999999999998642 279999
Q ss_pred HHH-HHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHH
Q 048184 193 ERL-FMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKF 271 (512)
Q Consensus 193 ~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~ 271 (512)
.++ ..+++++++.+ ||.+++.. +.+......+.... .|. +..++.+.+.++
T Consensus 153 ~~~~~~~~~~vi~~~-~G~~~~~~--------~~~~~~~~~~~~~~--------~P~-----------~~~~~~~~~~~~ 204 (415)
T 2zwu_A 153 EDYAEPFPIRIFMLL-AGLPEEDI--------PHLKYLTDQMTRPD--------GSM-----------TFAEAKEALYDY 204 (415)
T ss_dssp HHTTTHHHHHHHHHH-HTCCGGGH--------HHHHHHHHHHHSCC--------SSS-----------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHH--------HHHHHHHHHHHhcc--------CHH-----------HHHHHHHHHHHH
Confidence 865 78999999999 99987432 45555555554321 122 345567788899
Q ss_pred HHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHH
Q 048184 272 YEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVI 331 (512)
Q Consensus 272 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~ 331 (512)
+.++|++++++. ..|+++.|++...+ +..++++++..++ +|++||++|
T Consensus 205 ~~~~i~~r~~~~---------~~dll~~ll~~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~ 272 (415)
T 2zwu_A 205 LIPIIEQRRQKP---------GTDAISIVANGQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHR 272 (415)
T ss_dssp HHHHHHHHHHSC---------CSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhCC---------CCCHHHHHHHhhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHH
Confidence 999999887642 46899999987542 2368888887655 899999999
Q ss_pred HHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCC
Q 048184 332 QKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTL 411 (512)
Q Consensus 332 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~ 411 (512)
+++++|++ |++|||+|+||++|+++. . |.+.+|++++||.||||+.|+++.+++|+||++
T Consensus 273 ~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~ 332 (415)
T 2zwu_A 273 QELIERPE------------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERE 332 (415)
T ss_dssp HHHHHCGG------------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTT
T ss_pred HHHHhCHH------------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchh
Confidence 99999963 899999999999999995 6 999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccccCcc
Q 048184 412 WEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEERFGGR 490 (512)
Q Consensus 412 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~ 490 (512)
|+||++|+||||- ..++|||+|+|.|+|++||++|++++++.|+++|+ ++++++. .+. ..+.+
T Consensus 333 ~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~-~~~~~ 396 (415)
T 2zwu_A 333 NACPMHVDFSRQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA-----QIQ-HKSGI 396 (415)
T ss_dssp SSSTTSCCTTCSS----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC-----CCC-EECSS
T ss_pred CCCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc-----ccc-cCCcc
Confidence 9999999999961 36899999999999999999999999999999998 9997631 121 23445
Q ss_pred cccCCCceeeeccCCCCC
Q 048184 491 TSRKNPLLVVPKPRLPLD 508 (512)
Q Consensus 491 ~~~~~~~~v~~~~R~~~~ 508 (512)
.++..+++|++++|..-.
T Consensus 397 ~~~~~~lpv~~~~r~~~~ 414 (415)
T 2zwu_A 397 VSGVQALPLVWDPATTKA 414 (415)
T ss_dssp BCEESCCEEECCGGGCCC
T ss_pred ccCcceeEEEEecCCCCC
Confidence 666779999999997643
No 38
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=6.6e-55 Score=423.41 Aligned_cols=363 Identities=19% Similarity=0.282 Sum_probs=285.6
Q ss_pred ccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc--hhhhhhhc--------cCCcccc
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP--LLAWKHAN--------YNYLVMP 131 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~--~~~~~~~~--------~~~~~~~ 131 (512)
.+..+++..+.+| ++|||||++++++.++++|+|++.+++++.++. +.+++. ........ ..+.+++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 4567899999999 999999999988899999999999999998652 433321 01000000 0123444
Q ss_pred cCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH-HHHHHHHHHHHhcc
Q 048184 132 GAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF-MFNLAIMSRMLFGK 210 (512)
Q Consensus 132 ~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~ 210 (512)
..+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.+. . +++++|+.+++. .+++++++. +||.
T Consensus 89 -~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~ 159 (408)
T 1odo_A 89 -TAYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAEL-P-----AGEPVDLRQELAYPLPIAVIGH-LMGV 159 (408)
T ss_dssp -GCCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHS-C-----TTSCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred -ccCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhh-c-----CCCCcchHHHHhhhhHHHHHHH-HhCC
Confidence 44599999999999 799999999999999999999999999753 1 256899998887 599999996 7998
Q ss_pred ccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 048184 211 RYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKE 290 (512)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~ 290 (512)
+.+.. ..+...+..++... .+ .++..++.+.+.+++.++|++++++.
T Consensus 160 ~~~~~--------~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~i~~r~~~~------- 206 (408)
T 1odo_A 160 PQDRR--------DGFRALVDGVFDTT--------LD----------QAEAQANTARLYEVLDQLIAAKRATP------- 206 (408)
T ss_dssp CHHHH--------HHHHHHHHHHHCTT--------CC----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------
T ss_pred CHHHH--------HHHHHHHHHHhccc--------CC----------HHHHHHHHHHHHHHHHHHHHHHhhCC-------
Confidence 76321 44555555444310 00 14566778889999999999887543
Q ss_pred CCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccc
Q 048184 291 HGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEE 350 (512)
Q Consensus 291 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~ 350 (512)
..|+++.|+++..++..+..++++++..++ +|++||++|+|+++|+
T Consensus 207 --~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------ 272 (408)
T 1odo_A 207 --GDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------ 272 (408)
T ss_dssp --CSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------
T ss_pred --CCCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------
Confidence 368999999876432112368888887665 9999999999999973
Q ss_pred cCCCCChhHHHHHHhhhhcCCCccccCCccccccceec-CcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCC
Q 048184 351 KDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVA-GSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEID 429 (512)
Q Consensus 351 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~ 429 (512)
+|++|||+|+||++|+++...+|++.+|++++ ||.||||+.|.++.+++||||++|+||++|+||||
T Consensus 273 ------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------ 340 (408)
T 1odo_A 273 ------VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT------ 340 (408)
T ss_dssp ------SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS------
T ss_pred ------HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC------
Confidence 36999999999999999976679999999999 99999999999999999999999999999999994
Q ss_pred cccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 430 VVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 430 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
+..++|||+|+|.|+|++||++|++++++.|+++| ++++..+. .++.+ ..+.++++..+++|+++|
T Consensus 341 ----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 341 ----VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPA--EELPP--VPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp ----CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTT--SCCCB--CSCSSBCCBSCCEEECC-
T ss_pred ----CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCc--ccccc--ccCccccCcccceEEecC
Confidence 24689999999999999999999999999999999 79997432 12222 345667788899999875
No 39
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=4.2e-55 Score=425.21 Aligned_cols=381 Identities=20% Similarity=0.242 Sum_probs=284.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcc
Q 048184 29 VLLLLYYRHIFRNKINLLPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYD 108 (512)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~ 108 (512)
++++++|+.++++. ..+|||+. ..+++.++.++++ |||| +.++.++++|+|++++++++.+.
T Consensus 5 ~~~~~iyr~~~~pl---~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~- 66 (411)
T 2jjn_A 5 VETTCCARRTLTTI---DEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT- 66 (411)
T ss_dssp ------------CC---CSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-
T ss_pred hHhHHhhhcccCCC---CCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-
Confidence 34556667666544 45788872 2568889999976 9998 44656789999999999999864
Q ss_pred cccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCc
Q 048184 109 VTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTP 188 (512)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 188 (512)
..|++++... .......+.++++. +|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++. . + ++
T Consensus 67 ~~f~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~-----~-----~-~~ 132 (411)
T 2jjn_A 67 ATFSSDPTRV-IEGASPTPGMIHEI-DPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD-----A-----G-ES 132 (411)
T ss_dssp TTEESCGGGG-STTCCCCTTCGGGC-CTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT-----S-----C-SE
T ss_pred ccccCccccc-CCcccccccccccC-CchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc-----C-----C-Cc
Confidence 4687775422 11111223445444 599999999999 79999999999999999999999886 1 2 37
Q ss_pred eeHHHH-HHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHH
Q 048184 189 VHLKER-LFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKK 267 (512)
Q Consensus 189 vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~ 267 (512)
+|+... ...+++++++.+ ||.+.+..+ .+......+..... |. ++. ....++..++.+.
T Consensus 133 ~d~~~~~~~~~~~~vi~~~-fG~~~~~~~--------~~~~~~~~~~~~~~--------~~--~~~-p~~~~~~~~~~~~ 192 (411)
T 2jjn_A 133 FDLVDVLAFPLPVTIVAEL-LGLPPMDHE--------QFGDWSGALVDIQM--------DD--PTD-PALAERIADVLNP 192 (411)
T ss_dssp EEHHHHTTTHHHHHHHHHH-HTCCSCCCS--------TTCCHHHHHHHSCC--------SC--TTC-HHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHH-cCCCHHHHH--------HHHHHHHHHHhccC--------cc--ccc-hHHHHHHHHHHHH
Confidence 999854 568999999998 999875421 22223333333211 11 010 1223566778888
Q ss_pred HHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcC
Q 048184 268 IDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKN 327 (512)
Q Consensus 268 l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~ 327 (512)
+.+++.++|++++++. ..|+++.|+++..+ +..++++++..++ +|++|
T Consensus 193 ~~~~~~~~i~~r~~~~---------~~d~l~~ll~~~~~---~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~ 260 (411)
T 2jjn_A 193 LTAYLKARCAERRADP---------GDDLISRLVLAEVD---GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEH 260 (411)
T ss_dssp HHHHHHHHHHHHHHSC---------CSSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCC---------CCCHHHHHHhcccC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 9999999999887642 46899999987542 2368888887655 89999
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhcc
Q 048184 328 PEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGR 407 (512)
Q Consensus 328 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~ 407 (512)
|++|+|+++|++ |++|||+|+||++|+++. .+|++.+|++++||.||||+.|.++.+++|+
T Consensus 261 P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r 321 (411)
T 2jjn_A 261 PAHWDAAAEDPG------------------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANR 321 (411)
T ss_dssp THHHHHHHHCGG------------------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHT
T ss_pred HHHHHHHHhCHH------------------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCC
Confidence 999999999974 899999999999999996 5699999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccc
Q 048184 408 DPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEER 486 (512)
Q Consensus 408 d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~ 486 (512)
||++|+||++|+||||.+ ...++|||.|+|.|+|++||++|++++++.|+++|+ ++++++. . +...
T Consensus 322 dp~~~~dP~~F~PeR~~~--------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~--~~~~ 388 (411)
T 2jjn_A 322 DSDAHDDPDRFDPSRKSG--------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD---E--RLRH 388 (411)
T ss_dssp CTTTSSSTTSCCTTCCCS--------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS---C--CCCB
T ss_pred ChhhcCCccccCCCCCCC--------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC---c--eecc
Confidence 999999999999999842 136899999999999999999999999999999995 9997431 1 2112
Q ss_pred cCcccccCCCceeeeccCC
Q 048184 487 FGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 487 ~~~~~~~~~~~~v~~~~R~ 505 (512)
.+.+.+...+++|++++|.
T Consensus 389 ~~~~~~~~~~lpv~~~~~~ 407 (411)
T 2jjn_A 389 FEQIVLGTRHLPVLAGSSP 407 (411)
T ss_dssp CCSSSSSBSCCEEECSCCT
T ss_pred ccccccCcceeEEEecCCC
Confidence 3445566678999998874
No 40
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=3.1e-55 Score=424.52 Aligned_cols=356 Identities=13% Similarity=0.135 Sum_probs=286.9
Q ss_pred ccCCCccHHHHHHHhhc--CCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhH
Q 048184 62 LIGQNLHVSLQSLSQKY--GPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHW 139 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~ky--G~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 139 (512)
.+..+++.++.+|+++| ||||++++++ ++++|+|++.++++++ +...|.+++......... .+...++..+|+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETG-EFELMMAGQDDPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCc-ccccCcccCCchHH
Confidence 45678999999999999 9999999876 5899999999999995 456777766543322211 12234455569999
Q ss_pred HHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCccccc
Q 048184 140 RQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEEDEN 218 (512)
Q Consensus 140 ~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~ 218 (512)
+++|+.+ .+.|++..++.+.+.+.++++++++.+.. ...+|+...+ ..+++++++. +||.+.+..
T Consensus 93 ~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--- 158 (398)
T 4fb2_A 93 KKYRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIE---------LGEGDAATWLANEIPARLTAI-LLGLPPEDG--- 158 (398)
T ss_dssp HHHHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTT---------TTEEEHCCCCCTTHHHHHHHH-HTTSCGGGH---
T ss_pred HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh---------cCCccHHHHHHHHHHHHHHHH-HcCCCHHHH---
Confidence 9999999 79999999999999999999999988752 3458875544 6899999999 699775322
Q ss_pred CCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHH
Q 048184 219 NIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVD 298 (512)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~ 298 (512)
..+......+.... ..++..+..+.+.+++.++|++++++. ..|+++
T Consensus 159 -----~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~d~l~ 205 (398)
T 4fb2_A 159 -----DTYRRWVWAITHVE-------------------NPEEGAEIFAELVAHARTLIAERRTNP---------GNDIMS 205 (398)
T ss_dssp -----HHHHHHHHHHHHCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHSC---------CSSHHH
T ss_pred -----HHHHHHHHHHhcCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCHHH
Confidence 45555555544310 013667788889999999999988643 468999
Q ss_pred HHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChh
Q 048184 299 VLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPY 358 (512)
Q Consensus 299 ~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~ 358 (512)
.|++...++ ..++++++..++ +|+.||++|+|+++|++ |
T Consensus 206 ~ll~~~~~~---~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~ 264 (398)
T 4fb2_A 206 RVIMSKIDG---ESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------L 264 (398)
T ss_dssp HHHHCCBTT---BCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------G
T ss_pred HHHHcccCC---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------H
Confidence 999876533 258899888766 99999999999999975 6
Q ss_pred HHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcccee
Q 048184 359 IQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELL 438 (512)
Q Consensus 359 l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~ 438 (512)
++|||+|+||++|+++ .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||. ..++
T Consensus 265 l~a~i~E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~ 332 (398)
T 4fb2_A 265 IPNAVDELLRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP----------NRHL 332 (398)
T ss_dssp HHHHHHHHHHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS----------CCCC
T ss_pred HHHHHHHHHHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC----------CCCC
Confidence 8999999999999999 459999999999999999999999999999999999999999999982 4689
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCCC
Q 048184 439 PFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 439 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 506 (512)
|||+|+|.|+|++||++|++++++.|+++| +++++++. ++.+.. +.+ +....++|++++|..
T Consensus 333 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~--~~~-~~~~~lpv~~~~~~~ 395 (398)
T 4fb2_A 333 SLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK---ECEWLM--GQV-AGMLHVPIIFPKGKR 395 (398)
T ss_dssp TTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS---CCEEEC--SSB-CEEEECEEECCCCCC
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC---Cceecc--ccc-cccceeEEEEcCCCC
Confidence 999999999999999999999999999999 99998763 223222 333 333479999998854
No 41
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=1.2e-54 Score=421.79 Aligned_cols=361 Identities=18% Similarity=0.244 Sum_probs=283.5
Q ss_pred cCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhh----hhhccCCcccccCCCChh
Q 048184 63 IGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAW----KHANYNYLVMPGAPYGPH 138 (512)
Q Consensus 63 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~ 138 (512)
+..+++.++.++ ++|||||++++++.+++++++++++++++.++ ..|..++..... ......+.++++. +|+.
T Consensus 11 ~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~ 87 (404)
T 3ejb_B 11 FLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQ-NQPD 87 (404)
T ss_dssp HHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGC-CTTH
T ss_pred cccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhc-CCch
Confidence 346889999988 68999999999999999999999999999866 567776532111 0011112345444 5999
Q ss_pred HHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHH-HHHHHHHHHHHHHhccccCcccc
Q 048184 139 WRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKER-LFMFNLAIMSRMLFGKRYTEEDE 217 (512)
Q Consensus 139 w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~ 217 (512)
|+++||.+ .+.|++..++.+.+.+.++++++++.+. .+..+|+... ...++.++++. +||.+.+..
T Consensus 88 h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~---------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-- 154 (404)
T 3ejb_B 88 HRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQ---------GKKKMEVISDFAFPLASFVIAN-IIGVPEEDR-- 154 (404)
T ss_dssp HHHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTT---------TTSEEEHHHHTHHHHHHHHHHH-HHTCCGGGH--
T ss_pred HHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhh---------hcCCcchHHHHHHHHHHHHHHH-HcCCCHHHH--
Confidence 99999999 7999999999999999999999999875 3456898655 45689999998 489876432
Q ss_pred cCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHH
Q 048184 218 NNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIV 297 (512)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l 297 (512)
..+......+...... |+. ....++..+..+.+.+++.++++++++.. ..|++
T Consensus 155 ------~~~~~~~~~~~~~~~~-------p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~d~l 207 (404)
T 3ejb_B 155 ------EQLKEWAASLIQTIDF-------TRS-----RKALTEGNIMAVQAMAYFKELIQKRKRHP---------QQDMI 207 (404)
T ss_dssp ------HHHHHHHHHHHGGGST-------TCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC---------CSSHH
T ss_pred ------HHHHHHHHHHHHhccC-------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------cchHH
Confidence 4455555554433221 321 11245677788889999999999887543 46899
Q ss_pred HHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCCh
Q 048184 298 DVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLP 357 (512)
Q Consensus 298 ~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp 357 (512)
+.|+ ...+ +..++++++..++ +|++||++|+|+++|++
T Consensus 208 ~~ll-~~~~---~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------ 265 (404)
T 3ejb_B 208 SMLL-KGRE---KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------ 265 (404)
T ss_dssp HHHH-HC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------
T ss_pred HHHH-hccc---CCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------
Confidence 9999 4332 2368888887655 89999999999999864
Q ss_pred hHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccce
Q 048184 358 YIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFEL 437 (512)
Q Consensus 358 ~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~ 437 (512)
|++|||+|+||++|+++. .+|++.+|++++||.||||+.|.++.+++|+||++|+||++|+||||. ..+
T Consensus 266 ~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----------~~~ 334 (404)
T 3ejb_B 266 LIGTAVEECLRYESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----------NPH 334 (404)
T ss_dssp GHHHHHHHHHHHSCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS----------CCC
T ss_pred HHHHHHHHHHHhCCcccc-cceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC----------CCC
Confidence 799999999999999994 569999999999999999999999999999999999999999999982 357
Q ss_pred eccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 438 LPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 438 ~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
+|||+|+|.|+|++||++|++++++.|+++| +++++++ ++.+ ..+.+++....++|+++||.
T Consensus 335 ~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~----~~~~--~~~~~~~~~~~lpv~~~~~~ 397 (404)
T 3ejb_B 335 LSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF----EWRY--RPLFGFRALEELPVTFEASW 397 (404)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC------CCCB--CSCSSBCCBSCCEEECC---
T ss_pred CCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCC----Ccee--ccCcccCCcceeEEEEeccc
Confidence 9999999999999999999999999999999 9999854 2333 23455677789999999884
No 42
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=2.2e-55 Score=426.71 Aligned_cols=359 Identities=16% Similarity=0.194 Sum_probs=282.2
Q ss_pred cccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhh---hcc----CCccccc
Q 048184 61 NLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKH---ANY----NYLVMPG 132 (512)
Q Consensus 61 ~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 132 (512)
..+..+++..+.+| ++|||||++++ ++.++++|+|++.+++++.++ .|.+++....+.. ... .+.+++
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 95 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLI- 95 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTT-
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccc-
Confidence 45668899999999 99999999997 888999999999999999864 2444432111110 000 112444
Q ss_pred CCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH-HHHHHHHHHHHhccc
Q 048184 133 APYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF-MFNLAIMSRMLFGKR 211 (512)
Q Consensus 133 ~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~ 211 (512)
..+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.. .+.++|+..++. .+++++++. +||.+
T Consensus 96 ~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~g~~~d~~~~~~~~~~~~vi~~-~~G~~ 165 (408)
T 3abb_A 96 GVDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA--------KGPGADLVSAFALPVPSVAICE-LLGVP 165 (408)
T ss_dssp TCCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH--------TCSCEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred cCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCeehHHHHHHHHHHHHHHH-HhCCC
Confidence 45699999999999 79999999999999999999999999973 345799998876 589999997 79987
Q ss_pred cCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 048184 212 YTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEH 291 (512)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 291 (512)
++.. +.+...+..++... .| ++..++.+.+.+++.++|++++++.
T Consensus 166 ~~~~--------~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~~~~i~~r~~~~-------- 210 (408)
T 3abb_A 166 YGDH--------DFFEECSRNFVGAA--------TS-----------AEADAAFGELYTYLHGLVGRKQAEP-------- 210 (408)
T ss_dssp GGGH--------HHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC--------
T ss_pred HHHH--------HHHHHHHHHHhccc--------ch-----------HHHHHHHHHHHHHHHHHHHHHHhCC--------
Confidence 6321 44544444433210 00 2233456778888889998887643
Q ss_pred CcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCcccccc
Q 048184 292 GTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEK 351 (512)
Q Consensus 292 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 351 (512)
..|+++.|+++..+ +..++++++..++ +|+.||++|+++++|++
T Consensus 211 -~~d~l~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------ 274 (408)
T 3abb_A 211 -EDGLLDELIARQLE---EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------ 274 (408)
T ss_dssp -CSSHHHHHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------
T ss_pred -CCCHHHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------
Confidence 36899999986542 2268888887655 89999999999998763
Q ss_pred CCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcc
Q 048184 352 DIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVV 431 (512)
Q Consensus 352 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~ 431 (512)
|++|||+|+||++|+++ ..+|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||
T Consensus 275 ------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-------- 339 (408)
T 3abb_A 275 ------AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN-------- 339 (408)
T ss_dssp ------HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC--------
T ss_pred ------hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC--------
Confidence 79999999999999999 567999999999999999999999999999999999999999999996
Q ss_pred cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 432 GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 432 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
+..++|||+|+|.|+|++||++|++++++.|+++| +++++.+. ....+ ..+.+.+...+++|++++|.
T Consensus 340 --~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 340 --ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPL--DEVPI--KAGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp --CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGSCB--CCTTSCCSBSCCEEECSCCC
T ss_pred --CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCc--ccccc--ccCcccCCcceeEEEeCCCC
Confidence 13689999999999999999999999999999999 89997432 12222 23455677789999999884
No 43
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=9.8e-55 Score=421.65 Aligned_cols=369 Identities=16% Similarity=0.208 Sum_probs=287.4
Q ss_pred CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEe-EEEcCCHHHHHHHHHhcccccCCCCchhhhh--
Q 048184 46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLET-VVVGSSAEVAELLLKTYDVTFASRPPLLAWK-- 121 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~-~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~-- 121 (512)
..+|||+.+|+.++ +..+++.++.+++ +|||||++++ +|.+ +++|+|++++++|+.+ ..|.+++....+.
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 55788888888876 4578999999985 7999999996 6766 9999999999999985 3677765432111
Q ss_pred --h-hccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HH
Q 048184 122 --H-ANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FM 197 (512)
Q Consensus 122 --~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~ 197 (512)
. ....+.++++. +|+.|+++||.+ .+.|++..++.+.+.+.++++++++.|... ++++|+...+ ..
T Consensus 82 ~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~~~d~~~~~~~~ 151 (406)
T 1s1f_A 82 LAPHFIPARGAVGFL-DPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLRA--------GPPADLTEAVLSP 151 (406)
T ss_dssp SSSSCSSCTTSGGGC-CTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHH--------CSSEEHHHHTTTH
T ss_pred ccccccccccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCccHHHHHhhH
Confidence 1 11113455555 599999999999 799999999999999999999999999742 3479998766 57
Q ss_pred HHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 048184 198 FNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLH 277 (512)
Q Consensus 198 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 277 (512)
+++++++. +||.+++.. ..+......+..... | + ++..+..+.+.+++.++|+
T Consensus 152 ~~~~vi~~-~~G~~~~~~--------~~~~~~~~~~~~~~~--------~------~----~~~~~~~~~~~~~~~~~i~ 204 (406)
T 1s1f_A 152 FPIAVICE-LMGVPATDR--------HSMHTWTQLILSSSH--------G------A----EVSERAKNEMNAYFSDLIG 204 (406)
T ss_dssp HHHHHHHH-HHTCCGGGH--------HHHHHHHHHHHHHHT--------T------C----CCCHHHHTHHHHHHHHHHH
T ss_pred hHHHHHHH-HhCCCHHHH--------HHHHHHHHHHHhccC--------C------H----HHHHHHHHHHHHHHHHHHH
Confidence 99999998 699876432 344444444433211 1 0 1234556677888888887
Q ss_pred HHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-------------------HHhcCHHHHHHHHHHH
Q 048184 278 EHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-------------------QLLKNPEVIQKATDEL 338 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-------------------~L~~~p~~~~~l~~Ei 338 (512)
++++. ...|+++.|++...+ ..++++++..++ +|+.||++|+|+++|+
T Consensus 205 ~r~~~---------~~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AGeTt~~~l~~~l~~L~~~P~~~~~l~~E~ 271 (406)
T 1s1f_A 205 LRSDS---------AGEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEP 271 (406)
T ss_dssp TSCCS---------CCCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSHHHHHHHHHCG
T ss_pred HHHhC---------CCCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCH
Confidence 76533 245899999986432 257777766543 8999999999999986
Q ss_pred HHHhcCCccccccCCCCChhHHHHHHhhhhcCCCcc-ccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCC
Q 048184 339 DRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLT-LLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNE 417 (512)
Q Consensus 339 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~ 417 (512)
+ |++|||+|+||++|+++ ...+|++.+|++++||.||||+.|+++.+++||||++|+||++
T Consensus 272 ~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 333 (406)
T 1s1f_A 272 E------------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR 333 (406)
T ss_dssp G------------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred H------------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcce
Confidence 4 79999999999999999 4567999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCC
Q 048184 418 FCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNP 496 (512)
Q Consensus 418 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (512)
|+||||. ..++|||+|+|.|+|++||++|++++++.|+++| +++++++. ..+.+ ..+.+.+....
T Consensus 334 F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~ 399 (406)
T 1s1f_A 334 IDFERSP----------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP--EDVPF--KKGALIRGPEA 399 (406)
T ss_dssp CCTTC------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCB--CSSCSBCCBSC
T ss_pred eCCCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--cccee--ccCcccCCcce
Confidence 9999994 2579999999999999999999999999999999 79998652 12222 23445667778
Q ss_pred ceeeec
Q 048184 497 LLVVPK 502 (512)
Q Consensus 497 ~~v~~~ 502 (512)
++|++.
T Consensus 400 lpv~~~ 405 (406)
T 1s1f_A 400 LPVTWH 405 (406)
T ss_dssp CEEECC
T ss_pred eEEeeC
Confidence 888763
No 44
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=6.4e-54 Score=416.54 Aligned_cols=357 Identities=18% Similarity=0.216 Sum_probs=281.1
Q ss_pred ccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCch-hhhhhh-c-cCCcccccCCCCh
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPL-LAWKHA-N-YNYLVMPGAPYGP 137 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~g~ 137 (512)
.+..+++.++.++ ++|||||++++ +++++++|+|++.+++|+.++ .|.+++.. ..+... . ..+.++++. +|+
T Consensus 34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~-dg~ 109 (417)
T 2y5n_A 34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSM-DPP 109 (417)
T ss_dssp SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGC-CTT
T ss_pred hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccC-Cch
Confidence 3567899999999 89999999997 888999999999999999864 46655432 111111 1 123455544 599
Q ss_pred hHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCccc
Q 048184 138 HWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEED 216 (512)
Q Consensus 138 ~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~ 216 (512)
.|+++|+.+ .+.|++..++.+.+.+.++++++++.+... +.++|+..++ ..+++++++. +||.+++..
T Consensus 110 ~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~- 178 (417)
T 2y5n_A 110 EHSRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAAT--------GQPADLVAMFARQLPVRVICE-LLGVPSADH- 178 (417)
T ss_dssp HHHHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHHH--------CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-
T ss_pred HHHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH-
Confidence 999999999 799999999999999999999999999731 2379998776 4699999998 699876421
Q ss_pred ccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccH
Q 048184 217 ENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDI 296 (512)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 296 (512)
+.+......+... .. .| .++..++.+.+.+++.++|+++++.. ..|+
T Consensus 179 -------~~~~~~~~~~~~~---~~----~~----------~~~~~~~~~~l~~~~~~~i~~r~~~~---------~~dl 225 (417)
T 2y5n_A 179 -------DRFTRWSGAFLST---AE----VT----------AEEMQEAAEQAYAYMGDLIDRRRKEP---------TDDL 225 (417)
T ss_dssp -------HHHHHHHHTTSTT---CC----CC----------HHHHHHHHHHHHHHHHHHHHHHHHSC---------CSSH
T ss_pred -------HHHHHHHHHHhcc---cC----CC----------HHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCH
Confidence 3343333322211 00 01 24667778889999999999887643 3589
Q ss_pred HHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCC
Q 048184 297 VDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNL 356 (512)
Q Consensus 297 l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l 356 (512)
++.|+++..+ +..++++++..++ +|++||++|+|+++|++
T Consensus 226 l~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------- 285 (417)
T 2y5n_A 226 VSALVQARDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE----------------- 285 (417)
T ss_dssp HHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------
T ss_pred HHHHHhhhcc---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------
Confidence 9999987542 2368888887665 89999999999999853
Q ss_pred hhHHHHHHhhhhcCCCcc-ccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 357 PYIQAIVKEVMRLHPPLT-LLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 357 p~l~a~i~EtlRl~~~~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
|++|||+|+||++|+++ ...+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||. .
T Consensus 286 -~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~ 354 (417)
T 2y5n_A 286 -LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------N 354 (417)
T ss_dssp -GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------C
T ss_pred -HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------C
Confidence 79999999999999999 45679999999999999999999999999999999999999999999982 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP 501 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 501 (512)
.++|||.|+|.|+|++||++|++++++.|+++| +++++++. .++.+ ..+.+.+....++|++
T Consensus 355 ~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~ 417 (417)
T 2y5n_A 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPE--TQLRW--SEGMLLRGPLELPVVW 417 (417)
T ss_dssp CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CCCSSBCCBSCCEEEC
T ss_pred CcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--cccee--ccCcccCCcceeEEeC
Confidence 689999999999999999999999999999999 69997542 12223 2344456666777753
No 45
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=1.3e-54 Score=421.24 Aligned_cols=362 Identities=20% Similarity=0.217 Sum_probs=287.0
Q ss_pred ccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCc-hhhhh--hhc--------cC-Cc
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPP-LLAWK--HAN--------YN-YL 128 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~-~~~~~--~~~--------~~-~~ 128 (512)
.+..+++..+.++ ++|||||++++ ++.++++|+|++++++++.++. +.+++. ..... ... .. +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 4567899999999 99999999997 8999999999999999998653 444331 11000 000 01 23
Q ss_pred ccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH-HHHHHHHHHHH
Q 048184 129 VMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF-MFNLAIMSRML 207 (512)
Q Consensus 129 ~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~ 207 (512)
++++ .+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.. .++++|+..++. .+++++++. +
T Consensus 91 ~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~~~~~d~~~~~~~~~~~~vi~~-~ 159 (411)
T 1gwi_A 91 SMLT-VDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA--------DGGVVDLKAAFAYPLPMYVVAD-L 159 (411)
T ss_dssp SGGG-CCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC--------SCCCEEHHHHTTTHHHHHHHHH-H
T ss_pred cccc-CCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCcchHHHHhhHHHHHHHHH-H
Confidence 4444 4599999999999 79999999999999999999999988752 245799998876 599999996 7
Q ss_pred hccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 048184 208 FGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKL 287 (512)
Q Consensus 208 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 287 (512)
||.+.+.. +.+......++... .+ .++..++.+.+.+++.++|++++++.
T Consensus 160 ~G~~~~~~--------~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~i~~r~~~~---- 209 (411)
T 1gwi_A 160 MGIEEARL--------PRLKVLFEKFFSTQ--------TP----------PEEVVATLTELASIMTDTVAAKRAAP---- 209 (411)
T ss_dssp HTCCGGGH--------HHHHHHHHHHHCTT--------SC----------HHHHHHHHHHHHHHHHHHHHHHHHSC----
T ss_pred hCCCHHHH--------HHHHHHHHHHhccC--------CC----------hHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 99876321 45555555544310 00 14566778889999999999887543
Q ss_pred ccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCcc
Q 048184 288 FKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKW 347 (512)
Q Consensus 288 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~ 347 (512)
..|+++.|+++..+ +..++++++..++ +|++||++|+|+++|+
T Consensus 210 -----~~d~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------- 272 (411)
T 1gwi_A 210 -----GDDLTSALIQASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE--------- 272 (411)
T ss_dssp -----CSSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS---------
T ss_pred -----CCCHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh---------
Confidence 36899999987543 2368888887665 8999999999999863
Q ss_pred ccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCC
Q 048184 348 VEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLW-EKPNEFCPERFVGK 426 (512)
Q Consensus 348 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~ 426 (512)
+|++|||+|+||++|+++...+|++.+|++++||.||||+.|+++.+++|+||++| +||++|+||||.+
T Consensus 273 ---------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~- 342 (411)
T 1gwi_A 273 ---------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG- 342 (411)
T ss_dssp ---------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS-
T ss_pred ---------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC-
Confidence 37999999999999999976679999999999999999999999999999999999 9999999999942
Q ss_pred CCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 427 EIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 427 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
..++|||+|+|.|+|++||++|++++++.|+++| ++++..+. .++.+ ..+.+.++..+++|++++|.
T Consensus 343 --------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~lpv~~~~r~ 410 (411)
T 1gwi_A 343 --------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPA--AELRN--KPVVTQNDLFELPVRLAHHH 410 (411)
T ss_dssp --------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CSCTTBCCBSCCEEESSCC-
T ss_pred --------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCc--ccccc--cccccccCcceeEEEecCCC
Confidence 4689999999999999999999999999999999 89997432 12222 23455677889999999995
Q ss_pred C
Q 048184 506 P 506 (512)
Q Consensus 506 ~ 506 (512)
+
T Consensus 411 ~ 411 (411)
T 1gwi_A 411 H 411 (411)
T ss_dssp -
T ss_pred C
Confidence 3
No 46
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=1.3e-53 Score=413.65 Aligned_cols=354 Identities=19% Similarity=0.265 Sum_probs=284.1
Q ss_pred cCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCch--h----hh-------hhh-ccCCc
Q 048184 63 IGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPL--L----AW-------KHA-NYNYL 128 (512)
Q Consensus 63 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~--~----~~-------~~~-~~~~~ 128 (512)
+..+++.++.++ ++|||||++++++++++++++++++++++.++ .|.+++.. . .+ ... ...+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 457899999999 99999999999999999999999999999865 57766542 1 11 110 00134
Q ss_pred ccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHH
Q 048184 129 VMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRML 207 (512)
Q Consensus 129 ~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~ 207 (512)
++++. +|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+. .++++|+...+ ..+++++++. +
T Consensus 89 ~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~---------~~~~~d~~~~~~~~~~~~vi~~-~ 156 (404)
T 1z8o_A 89 NMGTS-DPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVG---------DSGVVDIVDRFAHPLPIKVICE-L 156 (404)
T ss_dssp SGGGC-CTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSC---------SSSEEEHHHHTTTHHHHHHHHH-H
T ss_pred ccccC-CCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhh---------hcCCcchHHHHhHHHHHHHHHH-H
Confidence 55554 599999999999 7999999999999999999999998874 24579998755 6899999998 4
Q ss_pred hccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 048184 208 FGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKL 287 (512)
Q Consensus 208 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 287 (512)
||.+.+.. ..+....+.+.. . . .| . .++..++.+.+.+++.++|++++++.
T Consensus 157 ~G~~~~~~--------~~~~~~~~~~~~-~---~----~p-------~--~~~~~~~~~~~~~~~~~~i~~r~~~~---- 207 (404)
T 1z8o_A 157 LGVDEKYR--------GEFGRWSSEILV-M---D----PE-------R--AEQRGQAAREVVNFILDLVERRRTEP---- 207 (404)
T ss_dssp TTCCGGGT--------TTHHHHHHHHHC-C---C----GG-------G--HHHHHHHHHHHHHHHHHHHHHHHHSC----
T ss_pred hCCCHHHH--------HHHHHHHHHHhc-c---C----Ch-------h--HHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 99876432 345555554443 1 0 11 1 35667788889999999999887643
Q ss_pred ccCCCcccHHHHHhcc-cCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCc
Q 048184 288 FKEHGTNDIVDVLLQL-ADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNK 346 (512)
Q Consensus 288 ~~~~~~~d~l~~ll~~-~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~ 346 (512)
..|+++.|++. ..+ +..++++++..++ +|++||++|+|+++|++
T Consensus 208 -----~~dll~~ll~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------- 272 (404)
T 1z8o_A 208 -----GDDLLSALIRVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------- 272 (404)
T ss_dssp -----CSSHHHHHHHCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------
T ss_pred -----CCCHHHHHHhhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------
Confidence 35899999986 432 2368888887655 99999999999999853
Q ss_pred cccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCC
Q 048184 347 WVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGK 426 (512)
Q Consensus 347 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~ 426 (512)
|++|||+|+||++|+++ ..+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.
T Consensus 273 -----------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~-- 338 (404)
T 1z8o_A 273 -----------ALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-- 338 (404)
T ss_dssp -----------GHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred -----------hHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC--
Confidence 79999999999999999 5679999999999999999999999999999999999999999999983
Q ss_pred CCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184 427 EIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP 501 (512)
Q Consensus 427 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 501 (512)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++. .++.+ ..+.+++...+++|++
T Consensus 339 --------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 339 --------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDA--DDVVW--RRSLLLRGIDHLPVRL 402 (404)
T ss_dssp --------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCC--CCCSSSCCCSCCEEET
T ss_pred --------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCC--Cccee--ccccccCCcceeEEEe
Confidence 3689999999999999999999999999999999 59997542 12233 2345567777888876
No 47
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=2.1e-54 Score=421.08 Aligned_cols=363 Identities=17% Similarity=0.195 Sum_probs=287.6
Q ss_pred cCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc-----hhhh-hhhccC---CcccccC
Q 048184 63 IGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP-----LLAW-KHANYN---YLVMPGA 133 (512)
Q Consensus 63 ~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~-----~~~~-~~~~~~---~~~~~~~ 133 (512)
+..+++.++.++ ++|||||+ + ++.++++|+|++++++++.++. |.+++. .... .....+ +.++++
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 97 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG- 97 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT-
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc-
Confidence 467899999999 78999999 6 6678999999999999998663 887762 1101 000111 234444
Q ss_pred CCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHH-HHHHHHHHHHHHHHhcccc
Q 048184 134 PYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKE-RLFMFNLAIMSRMLFGKRY 212 (512)
Q Consensus 134 ~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fG~~~ 212 (512)
.+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.. .+++|+.. ++..+++++++.+ ||.++
T Consensus 98 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~~~d~~~~~~~~~~~~vi~~~-fG~~~ 166 (419)
T 1q5d_A 98 LPPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG---------QEEFDVVRDYAEGIPMRAISAL-LKVPA 166 (419)
T ss_dssp SCHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT---------SSCEETTTTTGGGSHHHHHHHH-TTCCG
T ss_pred CCchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHH-hCCCH
Confidence 4599999999999 79999999999999999999999999863 23799886 4589999999998 99887
Q ss_pred CcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 048184 213 TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHG 292 (512)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 292 (512)
+.. ..+....+.+..... ...+|+.. ...++..+..+.+.+++.++|++++++.
T Consensus 167 ~~~--------~~~~~~~~~~~~~~~----~~~~P~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------- 220 (419)
T 1q5d_A 167 ECD--------EKFRRFGSATARALG----VGLVPRVD-----EETKTLVASVTEGLALLHGVLDERRRNP--------- 220 (419)
T ss_dssp GGH--------HHHHHHHHHHHHHTT----TTTSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHHHSC---------
T ss_pred HHH--------HHHHHHHHHHHHhcc----cccccCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 432 445555555544321 12344321 1235677788899999999999887642
Q ss_pred cc-cHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCcccccc
Q 048184 293 TN-DIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEK 351 (512)
Q Consensus 293 ~~-d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 351 (512)
.. |+++.|++...+ +..++++++..++ +|++||++|+|+++|+
T Consensus 221 ~~~dll~~ll~~~~~---~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------- 284 (419)
T 1q5d_A 221 LENDVLTMLLQAEAD---GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------- 284 (419)
T ss_dssp CSSCHHHHHHHHHHS---STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------
T ss_pred CCCCHHHHHHhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------
Confidence 34 899999987432 2368888887665 9999999999999984
Q ss_pred CCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcc
Q 048184 352 DIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVV 431 (512)
Q Consensus 352 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~ 431 (512)
.|++|||+|+||++|+++...+|++.+|++++||.||||+.|.++.+++||||++|+||++|+|||| +
T Consensus 285 -----~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~----- 352 (419)
T 1q5d_A 285 -----GLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T----- 352 (419)
T ss_dssp -----GGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C-----
T ss_pred -----HHHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C-----
Confidence 3899999999999999995567999999999999999999999999999999999999999999994 1
Q ss_pred cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCCC
Q 048184 432 GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 432 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 506 (512)
..++|||+|+|.|+|++||++|++++++.|+++| +++++++. .+ ..+.+.++..+++|++++|+.
T Consensus 353 ---~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~--~~~~~~~~~~~l~v~~~~r~~ 418 (419)
T 1q5d_A 353 ---SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP-----VF--GYHPAFRNIESLNVILKPSKA 418 (419)
T ss_dssp ---TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC-----EE--CCCSSBCCEEECEEESSCC--
T ss_pred ---CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc-----cc--ccccccCCCceeEEEEecCCC
Confidence 3689999999999999999999999999999999 89997641 22 224556777899999999963
No 48
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=5.9e-54 Score=415.43 Aligned_cols=357 Identities=17% Similarity=0.237 Sum_probs=282.6
Q ss_pred CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh------hh-ccCCcccccCCCC
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK------HA-NYNYLVMPGAPYG 136 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~g 136 (512)
..+++.++..+ ++||||++ + |.++++|+|++++++++.+ ..|.+++....+. .. ...+.++++. +|
T Consensus 12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g 84 (397)
T 3buj_A 12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DE 84 (397)
T ss_dssp HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CT
T ss_pred ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cc
Confidence 35788888877 69999999 6 5689999999999999985 3566543221110 11 1102445555 59
Q ss_pred hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHH-HHHHHHHHHHHHHhccccCcc
Q 048184 137 PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKER-LFMFNLAIMSRMLFGKRYTEE 215 (512)
Q Consensus 137 ~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~ 215 (512)
+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+.. ++++|+... ...+++++++.+ ||.+++..
T Consensus 85 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~ 153 (397)
T 3buj_A 85 PDHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALA---------RGAMDVVDELAYPLALRAVLGL-LGLPAADW 153 (397)
T ss_dssp THHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHT---------TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH
T ss_pred hhHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhh---------cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH
Confidence 9999999999 79999999999999999999999999972 347998754 578999999998 99887432
Q ss_pred cccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 048184 216 DENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTND 295 (512)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d 295 (512)
+.+......+...... .++ ....++..++.+.+.+++.++|++++++. ..|
T Consensus 154 --------~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~d 204 (397)
T 3buj_A 154 --------GAVGRWSRDVGRTLDR-----GAS-------AEDMRRGHAAIAEFADYVERALARRRREG---------GED 204 (397)
T ss_dssp --------HHHHHHHHHHHGGGCS-----SCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CCS
T ss_pred --------HHHHHHHHHHHhhcCC-----CCC-------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------CCC
Confidence 4455555555443211 011 11235667778889999999999887653 358
Q ss_pred HHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCC
Q 048184 296 IVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVN 355 (512)
Q Consensus 296 ~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~ 355 (512)
+++.|+++..+ + .++++++..++ +|++||++|+|+++|++
T Consensus 205 ll~~ll~~~~~---~-~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------- 264 (397)
T 3buj_A 205 LLALMLDAHDR---G-LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD---------------- 264 (397)
T ss_dssp HHHHHHHHHHT---T-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG----------------
T ss_pred HHHHHHHhhhc---C-CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH----------------
Confidence 99999987532 2 28888887665 99999999999999853
Q ss_pred ChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 356 LPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 356 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
|++|||+|+||++|+++ ..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||. .
T Consensus 265 --~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~ 331 (397)
T 3buj_A 265 --LLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------V 331 (397)
T ss_dssp --GHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------C
T ss_pred --HHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------C
Confidence 89999999999999999 5669999999999999999999999999999999999999999999994 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
.++|||+|+|.|+|++||++|++++++.| ++| +++++++. +++.+ ..+.++++..+++|+++||.
T Consensus 332 ~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~--~~~~~--~~~~~~~~~~~l~v~~~~rg 397 (397)
T 3buj_A 332 PSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCAS--DALAY--QPRTMFRGLASLPIAFTPGG 397 (397)
T ss_dssp CCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCS--TTCCB--CSCSSCCCBSCCEEECCTTC
T ss_pred CCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCC--ccccc--ccccccCCCcceeEEecCCC
Confidence 57999999999999999999999999999 999 89997652 12233 23456678889999999983
No 49
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=1.7e-53 Score=414.70 Aligned_cols=335 Identities=14% Similarity=0.200 Sum_probs=276.5
Q ss_pred cccCCCccHHHHHHHhhcCCceEEecC-CEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc-------cCCccccc
Q 048184 61 NLIGQNLHVSLQSLSQKYGPLMQLKFG-LETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN-------YNYLVMPG 132 (512)
Q Consensus 61 ~~~~~~~~~~~~~~~~kyG~v~~~~~~-~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 132 (512)
..+..+++.++.+|+++ ||||+++++ |.++++|++++++++++.++ .|++++....+.... ..+.++++
T Consensus 25 ~~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (417)
T 3tyw_A 25 RGCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIR 101 (417)
T ss_dssp CSSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGG
T ss_pred cccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhh
Confidence 34468999999999998 999999986 58999999999999999865 676653221111110 12334544
Q ss_pred CCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccc
Q 048184 133 APYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKR 211 (512)
Q Consensus 133 ~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~ 211 (512)
. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+... ++++|+..++ ..++.++++.+ ||.+
T Consensus 102 ~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~~~d~~~~~~~~~~~~vi~~~-~G~~ 170 (417)
T 3tyw_A 102 T-DAPEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLAA--------GGPVDLVSAYANAVSTSVICEL-LGIP 170 (417)
T ss_dssp C-CHHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHHH--------CSSEEHHHHTHHHHHHHHHHHH-HTCC
T ss_pred c-CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhh--------CCCcchHHHHHHHHHHHHHHHH-hCCC
Confidence 4 599999999999 799999999999999999999999999752 4579999987 58899999987 9988
Q ss_pred cCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 048184 212 YTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEH 291 (512)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 291 (512)
++.. ..+......+.... + ..++..+..+.+.+++.++|++++++.
T Consensus 171 ~~~~--------~~~~~~~~~~~~~~---------~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~-------- 216 (417)
T 3tyw_A 171 RHDL--------EFFRDVTRISGSRN---------S---------TAEQVSEALGGLFGLLGGLVAERREEP-------- 216 (417)
T ss_dssp TTTT--------THHHHHHHHHHSSS---------S---------CTTHHHHHHHHHHHHHHHHHHHHHSSC--------
T ss_pred HHHH--------HHHHHHHHHHhccc---------C---------CHHHHHHHHHHHHHHHHHHHHHHhhCC--------
Confidence 7532 44555555443321 0 013566778889999999999887543
Q ss_pred CcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCcccccc
Q 048184 292 GTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEK 351 (512)
Q Consensus 292 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 351 (512)
..|+++.+++...+++ .++++++..++ +|++||++|+|+++|++
T Consensus 217 -~~d~l~~ll~~~~~~~---~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------ 280 (417)
T 3tyw_A 217 -RDDLISKLVTDHLVPG---NVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------ 280 (417)
T ss_dssp -CSSHHHHHHHHTTTTT---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------
T ss_pred -CCCHHHHHHHhcccCC---CCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------
Confidence 4799999998866542 58888887655 99999999999999864
Q ss_pred CCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcc
Q 048184 352 DIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVV 431 (512)
Q Consensus 352 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~ 431 (512)
||+|||+|+||++|+++...+|++.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.
T Consensus 281 ------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------- 347 (417)
T 3tyw_A 281 ------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD------- 347 (417)
T ss_dssp ------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC-------
T ss_pred ------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC-------
Confidence 7999999999999999987679999999999999999999999999999999999999999999993
Q ss_pred cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCC
Q 048184 432 GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGD 475 (512)
Q Consensus 432 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 475 (512)
..++|||.|+|.|+|++||++|++++++.|+++| +++++.+
T Consensus 348 ---~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~ 389 (417)
T 3tyw_A 348 ---NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE 389 (417)
T ss_dssp ---CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred ---CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence 3689999999999999999999999999999999 9999854
No 50
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=2.1e-54 Score=419.06 Aligned_cols=357 Identities=15% Similarity=0.193 Sum_probs=279.6
Q ss_pred CCCccHHHHHHHhhcCCceEEecCC--EeEEEcCCHHHHHHHHHhcccccCCCCchhhhh-hh--ccC--CcccccCCCC
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFGL--ETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK-HA--NYN--YLVMPGAPYG 136 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~~--~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~-~~--~~~--~~~~~~~~~g 136 (512)
++++|.++.+++ +||||+++++++ .+.++|++++++++|+.+. .|.+++...... .. ..+ +.+++ ..+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLA-FADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCST-TCCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccc-cCCc
Confidence 677889999997 899999999754 6799999999999999753 566654332110 01 111 33444 4469
Q ss_pred hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHH-HHHHHHHHHHHhccccCcc
Q 048184 137 PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLF-MFNLAIMSRMLFGKRYTEE 215 (512)
Q Consensus 137 ~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~ 215 (512)
+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.|... +.++|+..++. .+++++++. +||.+++..
T Consensus 102 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~ 171 (411)
T 2dkk_A 102 PDHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAE--------GPPADLVERVLEPFPIAVVSE-VMGVPAADR 171 (411)
T ss_dssp THHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH--------CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH
T ss_pred hHHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCeehHHHHHHHHHHHHHHH-HhCCCHHHH
Confidence 9999999999 799999999999999999999999999752 34799997775 699999998 599876431
Q ss_pred cccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 048184 216 DENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTND 295 (512)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d 295 (512)
+.+......+.. ..+ ..++..++.+.+.+++.++|++++++. ..|
T Consensus 172 --------~~~~~~~~~~~~---------~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~---------~~d 216 (411)
T 2dkk_A 172 --------ERVHSWTRQIIS---------TSG---------GAEAAERAKRGLYGWITETVRARAGSE---------GGD 216 (411)
T ss_dssp --------HHHHHHHGGGCS---------SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTCC---------SSC
T ss_pred --------HHHHHHHHHHHh---------ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCC
Confidence 333333222111 011 124566778888999999988876432 358
Q ss_pred HHHHHhcccCCccccccccHHHHHHHH-------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCC
Q 048184 296 IVDVLLQLADDPTLEVKLERDHIKASM-------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNL 356 (512)
Q Consensus 296 ~l~~ll~~~~~~~~~~~l~~~~i~~~~-------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l 356 (512)
+++.|+++ .+ +..++++++..++ +|++||++|+++++|++
T Consensus 217 ll~~ll~~-~~---~~~ls~~el~~~~~~l~~AGeTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------- 275 (411)
T 2dkk_A 217 VYSMLGAA-VG---RGEVGETEAVGLAGPLQIGGEAVTHNVGQMLYLLLTRRELMARMRERPG----------------- 275 (411)
T ss_dssp HHHHHHHH-HH---TTSSCTTSHHHHHHHHHHTHHHHHHHHHHHHHHHHHSHHHHHHHHHCTT-----------------
T ss_pred HHHHHHHh-cC---CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------
Confidence 99999986 21 2245555544332 89999999999999864
Q ss_pred hhHHHHHHhhhhcCCCcccc-CCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 357 PYIQAIVKEVMRLHPPLTLL-APHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 357 p~l~a~i~EtlRl~~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
|++|||+|+||++|+++.. .+|++.+|++|+|+.||||+.|.++.+++|+||++|+||++|+||||. .
T Consensus 276 -~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~ 344 (411)
T 2dkk_A 276 -ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------N 344 (411)
T ss_dssp -CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------C
T ss_pred -HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------C
Confidence 7899999999999999955 669999999999999999999999999999999999999999999994 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
.++|||+|+|.|+|++||++|++++++.|+++| +++++++. .++.+ ..+.+++...+++|++++|.
T Consensus 345 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 345 PHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPA--EQVAW--RRKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGCCB--CCSSSBCCBSCCEEECCCCC
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCc--ccccc--ccCcccCCcceeEEEeccCC
Confidence 689999999999999999999999999999999 99997652 12223 22455677789999999983
No 51
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=1.8e-55 Score=440.03 Aligned_cols=406 Identities=13% Similarity=0.121 Sum_probs=277.3
Q ss_pred CCCCCCCCCCCCceeeecccc-----CCCccHHHHHHHhhcCC-ceEEecCCEeE-------EEcCCHHHHHHHHHhcc-
Q 048184 43 INLLPPPGPKPWHLIVNLNLI-----GQNLHVSLQSLSQKYGP-LMQLKFGLETV-------VVGSSAEVAELLLKTYD- 108 (512)
Q Consensus 43 ~~~~~ppgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvi~d~~~~~~i~~~~~- 108 (512)
.+.+.||||+++|++|+++++ ..+++.++.++++|||+ ||++++++.++ +++.+++..+.++....
T Consensus 25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v 104 (495)
T 3dsk_A 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV 104 (495)
T ss_dssp CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence 344689999999999999876 57899999999999999 99999988887 66677776665554321
Q ss_pred ---cccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 048184 109 ---VTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSS 185 (512)
Q Consensus 109 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 185 (512)
..+....... ...........++..+|+.|+++|+.+ .+.|+... +.+.+.+++.++++++.|..... +
T Consensus 105 ~k~~~~~~~~~~~-~~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~-----~ 176 (495)
T 3dsk_A 105 EKKDLLTGTYMPS-TELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELS-----L 176 (495)
T ss_dssp ECSSCTTSSSCCC-GGGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHH-----H
T ss_pred cccccccccCCCC-ccccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-----c
Confidence 1111111111 111111112334445699999999999 68898755 88999999999999999976433 3
Q ss_pred CCceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccc-cccc-----c-c-cch
Q 048184 186 STPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPW-LAFL-----D-L-QGN 257 (512)
Q Consensus 186 ~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~~-----~-~-~~~ 257 (512)
++++|+.+++..+++++++.++||.+++..+ ....+...++.+............+|. +..+ . + ...
T Consensus 177 ~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~ 251 (495)
T 3dsk_A 177 KGKADFGGSSDGTAFNFLARAFYGTNPADTK-----LKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALV 251 (495)
T ss_dssp HSSEESHHHHHHHHHHHHHHHHHSCCGGGST-----TTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGG
T ss_pred CCCccHHHHHHHHHHHHHHHHHcCCCcchhh-----hhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhh
Confidence 5689999999999999999999999886542 223344444433321100000012231 1100 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhccc-CCccccccccHHHHHHHH-HHhc-CHHHHHHH
Q 048184 258 IKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLA-DDPTLEVKLERDHIKASM-QLLK-NPEVIQKA 334 (512)
Q Consensus 258 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~-~L~~-~p~~~~~l 334 (512)
.....+..+.+.+.+..+++..... +-...++++.++... .. +..-+...+...+ +|+. ||++|++|
T Consensus 252 ~~~~~~~~~~~~~~~~~ll~~~~~~-------~l~~~ei~~~~~~~l~~a---g~~tt~~~l~~~l~~L~~~~P~~~~~l 321 (495)
T 3dsk_A 252 KSDYQRLYEFFLESAGEILVEADKL-------GISREEATHNLLFATCFN---TWGGMKILFPNMVKRIGRAGHQVHNRL 321 (495)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHT-------TCCHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHhcCHHHHHHH
Confidence 1111222222222223333333211 122333443222111 10 0012222333333 8885 99999999
Q ss_pred HHHHHHHhcCC-ccccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee----cCcccCCCCEEEEehhhhccCC
Q 048184 335 TDELDRVIGRN-KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV----AGSNILKNSRVIVNVWAIGRDP 409 (512)
Q Consensus 335 ~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~ 409 (512)
++|++++++.+ +.++++++++||||+|||+|+||++|+++... |.+.+|+++ +||.||||+.|+++.+++|+||
T Consensus 322 r~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp 400 (495)
T 3dsk_A 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDP 400 (495)
T ss_dssp HHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCT
T ss_pred HHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEeccHHhhCCc
Confidence 99999998763 67899999999999999999999999999987 889999999 4999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccceec---------cCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCC
Q 048184 410 TLWEKPNEFCPERFVGKEIDVVGHNFELLP---------FGSGRRMCVGYALGLKIVQSTLANLLHGFEWKLPGD 475 (512)
Q Consensus 410 ~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~ 475 (512)
++|+||++|+|+||+++++. ....+++ ||+|+|.|||++||.+|++++++.|+++|++...++
T Consensus 401 ~~~~dp~~F~P~Rfl~~~~~---~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 472 (495)
T 3dsk_A 401 KIFDRADEFVPERFVGEEGE---KLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472 (495)
T ss_dssp TTSTTTTSCCTTTTCHHHHH---HGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCccccCCcccCCCCcc---chhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence 99999999999999975321 2233444 555559999999999999999999999999987643
No 52
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-53 Score=412.45 Aligned_cols=357 Identities=15% Similarity=0.192 Sum_probs=284.3
Q ss_pred CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHHH
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTR 143 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 143 (512)
..+++.++.++++ |||||++. . ++++|+|++++++++.+. ..|.+++... ... ..+.++++. +|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~--~~~~~l~~~-~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQ--PALPMMIDM-DDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCT-TTEESTTCSS-TTS--CCCSSGGGC-CTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCc-ccccCccccC-Ccc--ccccccccc-CchHHHHHH
Confidence 4678999999987 99999775 3 689999999999999764 3677775432 111 123455555 599999999
Q ss_pred HHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHH-HHHHHHHHHHHHHHHhccccCcccccCCCC
Q 048184 144 KIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLK-ERLFMFNLAIMSRMLFGKRYTEEDENNIVT 222 (512)
Q Consensus 144 ~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~ 222 (512)
+.+ .+.|++..++.+.+.+.+.++++++.|.. .+.+|+. +++..+++++++.+ ||.+++..
T Consensus 88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~------- 149 (398)
T 2xkr_A 88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE---------RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR------- 149 (398)
T ss_dssp HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT---------TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-------
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh---------cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-------
Confidence 999 79999999999999999999999998852 2379999 55578999999998 99986432
Q ss_pred hhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhc
Q 048184 223 PKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQ 302 (512)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 302 (512)
+.+......+...... ..+| ...++..++.+.+.+++.++|++++++. ..|+++.|++
T Consensus 150 -~~~~~~~~~~~~~~~~----~~~p--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~dll~~ll~ 207 (398)
T 2xkr_A 150 -DMFLRWSDDLVTFLSS----HVSQ--------EDFQITMDAFAAYNDFTRATIAARRADP---------TDDLVSVLVS 207 (398)
T ss_dssp -HHHHHHHHHHHHHHTS----CCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHSC---------CSSHHHHHHH
T ss_pred -HHHHHHHHHHHhccCc----ccch--------hhHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCHHHHHHH
Confidence 4455555554432110 1111 2235667778889999999999887642 4689999998
Q ss_pred ccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHH
Q 048184 303 LADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAI 362 (512)
Q Consensus 303 ~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~ 362 (512)
+..+ +..++++++..++ +|++||++|+++++|++ |++||
T Consensus 208 ~~~~---~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~ 266 (398)
T 2xkr_A 208 SEVD---GERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGA 266 (398)
T ss_dssp CCBT---TBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHH
T ss_pred hhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHH
Confidence 7643 2368888887665 89999999999999975 89999
Q ss_pred HHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCC
Q 048184 363 VKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGS 442 (512)
Q Consensus 363 i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~ 442 (512)
|+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.. .++|||.
T Consensus 267 i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~ 335 (398)
T 2xkr_A 267 IEEMLRWTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------SHLAFGF 335 (398)
T ss_dssp HHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------CCCTTCC
T ss_pred HHHHHhhcccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------CCCcCCC
Confidence 9999999999998 6799999999999999999999999999999999999999999999841 4899999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcc-cccCcccccCCCceeeeccCCC
Q 048184 443 GRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDME-ERFGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 443 G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~R~~ 506 (512)
|+|.|+|++||++|++++++.|+++| +++++++. ++. ...+...+...+++|+++||..
T Consensus 336 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~lpv~~~p~~r 396 (398)
T 2xkr_A 336 GTHFCLGNQLARLELSLMTERVLRRLPDLRLVADD-----SVLPLRPANFVSGLESMPVVFTPSPP 396 (398)
T ss_dssp STTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTT-----CCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred CCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCc-----ceecccCcccccCccceeEEecCCCC
Confidence 99999999999999999999999999 69997431 221 0123445566689999998854
No 53
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=1.3e-54 Score=424.52 Aligned_cols=367 Identities=18% Similarity=0.205 Sum_probs=276.1
Q ss_pred CCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHHH
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTR 143 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 143 (512)
..+++.++.++ ++|||||++..++ +++|++++++++|+.+.. .|.+++....... .. +.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~-~~-~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEP-VM-RGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCC-SC-C-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccc-cc-CCCccccCCcHHHHHHH
Confidence 46788888877 6899999998766 799999999999998664 4777654333221 11 23334455699999999
Q ss_pred HHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHH-HHHHHHHHHHHHHHHhccccCcccccCCCC
Q 048184 144 KIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLK-ERLFMFNLAIMSRMLFGKRYTEEDENNIVT 222 (512)
Q Consensus 144 ~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~ 222 (512)
+.+ .+.|++..++.+.+.+.+.++++++.|. .++.+|+. ++...+++++++. +||.+....
T Consensus 126 r~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~---------~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~------- 187 (441)
T 3nc3_A 126 RIV-VRSFIGDALDHLSPLIKQNAENLLAPYL---------ERGKSDLVNDFGKTFAVCVTMD-MLGLDKRDH------- 187 (441)
T ss_dssp HHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTT---------TTTEEECCCCCHHHHHHHHHHH-HTTCCGGGH-------
T ss_pred HHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHH---------hcCCCcHHHHHHHHHHHHHHHH-HcCCCHHHH-------
Confidence 999 7999999999999999999999998875 34568874 4555699999998 589876332
Q ss_pred hhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhc
Q 048184 223 PKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQ 302 (512)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 302 (512)
..+......+......+. .+ ....+...+..+++.+++.++|++++++. ..|+++.|++
T Consensus 188 -~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~---------~~Dll~~Ll~ 246 (441)
T 3nc3_A 188 -EKISEWHSGVADFITSIS----QS-------PEARAHSLWCSEQLSQYLMPVIKERRVNP---------GSDLISILCT 246 (441)
T ss_dssp -HHHHHHHHHHHHHHHCSC----CC-------HHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------CSSHHHHHCC
T ss_pred -HHHHHHHHHHHHhccccc----CC-------hHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCHHHHHHH
Confidence 445555555444322111 01 11135666778889999999999887432 4689999998
Q ss_pred ccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHH
Q 048184 303 LADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAI 362 (512)
Q Consensus 303 ~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~ 362 (512)
+..+ +..++++++..++ +|++||++|+++++|+ +|+++|
T Consensus 247 ~~~~---~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~ 305 (441)
T 3nc3_A 247 SEYE---GMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRA 305 (441)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHH
T ss_pred hhcc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHH
Confidence 7653 2368888887765 9999999999999975 599999
Q ss_pred HHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCC
Q 048184 363 VKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGS 442 (512)
Q Consensus 363 i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~ 442 (512)
|+|+||++|+++. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||++||||||+.+.......+..++|||+
T Consensus 306 i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~ 384 (441)
T 3nc3_A 306 IAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGS 384 (441)
T ss_dssp HHHHHHHSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCC
T ss_pred HHHhhhcCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCC
Confidence 9999999999998 569999999999999999999999999999999999999999999997654332223678999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 443 GRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 443 G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
|+|.|+|++||++|++++++.|+++| +++++++. +.+ ..+.+++....++|+++|
T Consensus 385 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~----~~~--~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 385 GIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF----CYA--ESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp GGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC----CCC--EECSSBCEESCCEEECC-
T ss_pred CCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC----ccc--ccCccccCcceeEEEEec
Confidence 99999999999999999999999999 99998652 222 234456666789998864
No 54
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=5e-54 Score=420.04 Aligned_cols=374 Identities=16% Similarity=0.170 Sum_probs=283.9
Q ss_pred CCCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEe--------cCCEeEEEcCCHHHHHHHHHhcccccCCCCch
Q 048184 46 LPPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLK--------FGLETVVVGSSAEVAELLLKTYDVTFASRPPL 117 (512)
Q Consensus 46 ~~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~--------~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~ 117 (512)
..||+|..+++++.......+++.++.++ ++||||+++. +|+.++++|++++++++++++. ..|+.++..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~ 95 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENG 95 (433)
T ss_dssp --CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTC
T ss_pred CCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCccc
Confidence 45777777777776554456799999999 8899999998 4447899999999999999754 567776543
Q ss_pred hhhh--------hhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCce
Q 048184 118 LAWK--------HANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPV 189 (512)
Q Consensus 118 ~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 189 (512)
.... .....+.+++ ..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. ++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~~~ 164 (433)
T 3ivy_A 96 VIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA---------AGSG 164 (433)
T ss_dssp SCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH---------HCEE
T ss_pred ccccccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh---------CCCe
Confidence 3221 1112234454 44599999999999 79999999999999999999999999973 2469
Q ss_pred eHHHHH-HHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHH
Q 048184 190 HLKERL-FMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKI 268 (512)
Q Consensus 190 dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l 268 (512)
|+..++ ..+++++++.+ ||.+. +....+.+....... ...|.+.. .+..++.+.+
T Consensus 165 d~~~~~~~~~~~~vi~~l-~G~~~-----------~~~~~~~~~~~~~~~-----~~~p~~~~-------~~~~~~~~~~ 220 (433)
T 3ivy_A 165 DFVEQVSCELPLQAIAGL-LGVPQ-----------EDRGKLFHWSNEMTG-----NEDPEYAH-------IDPKASSAEL 220 (433)
T ss_dssp EHHHHTTSHHHHHHHHHH-HTCCH-----------HHHHHHHHHHTTCSC-----CCCGGGTT-------CCHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHH-cCCCH-----------HHHHHHHHHHHHHhc-----cCCchhhh-------HHHHHHHHHH
Confidence 998887 99999999996 89653 112222222212111 12232211 1455677888
Q ss_pred HHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCH
Q 048184 269 DKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNP 328 (512)
Q Consensus 269 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p 328 (512)
.+++.+++++++++. ..|+++.|+++..++ ..++++++..++ +|++||
T Consensus 221 ~~~~~~~i~~r~~~~---------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P 288 (433)
T 3ivy_A 221 IGYAMKMAEEKAKNP---------ADDIVTQLIQADIDG---EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP 288 (433)
T ss_dssp HHHHHHHHHHC----------------CHHHHHSCC--C---CCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhcCC---------CCcHHHHHHhhhcCC---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCH
Confidence 999999998887543 468999999876533 368888887765 999999
Q ss_pred HHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccC
Q 048184 329 EVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRD 408 (512)
Q Consensus 329 ~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d 408 (512)
++|+++++|++ +|||+|+||++|+++.. +|++.+|++++||.||||+.|+++.+++|||
T Consensus 289 ~~~~~l~~E~~--------------------~a~i~E~LRl~p~~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rd 347 (433)
T 3ivy_A 289 DQWELYKKVRP--------------------ETAADEIVRWATPVTAF-QRTALRDYELSGVQIKKGQRVVMFYRSANFD 347 (433)
T ss_dssp HHHHHHHHHCC--------------------TTHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTC
T ss_pred HHHHHHHhCcc--------------------cchhHHHhhhCcchhce-eeEECCCEEECCEEECCCCEEEEChhhhcCC
Confidence 99999999974 79999999999999985 6999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCccceeccC-CCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccc
Q 048184 409 PTLWEKPNEFCPERFVGKEIDVVGHNFELLPFG-SGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEER 486 (512)
Q Consensus 409 ~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~ 486 (512)
|++|+||++|+||||. ..++||| +|+|.|+|++||++|++++++.|+++|+ ++++++. .. .
T Consensus 348 p~~f~dp~~F~p~R~~----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~--~ 410 (433)
T 3ivy_A 348 EEVFQDPFTFNILRNP----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP-----ER--L 410 (433)
T ss_dssp TTTSSSTTSCCTTCCS----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC-----EE--C
T ss_pred chhCCCcCccCCCCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC-----ce--e
Confidence 9999999999999993 2689999 9999999999999999999999999999 9997542 11 1
Q ss_pred cCcccccCCCceeeeccCCC
Q 048184 487 FGGRTSRKNPLLVVPKPRLP 506 (512)
Q Consensus 487 ~~~~~~~~~~~~v~~~~R~~ 506 (512)
.+...+....++|++++|.+
T Consensus 411 ~~~~~~g~~~lpv~~~~R~~ 430 (433)
T 3ivy_A 411 RSGWLNGIKHWQVDYTGRCP 430 (433)
T ss_dssp CCSSBCCEEECEEESCC---
T ss_pred ccCcccCcceeEEEEecccc
Confidence 12223334489999999976
No 55
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=1.4e-53 Score=415.89 Aligned_cols=379 Identities=14% Similarity=0.133 Sum_probs=291.8
Q ss_pred CCCCCCCCCc---eeeec---c-ccCCCccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCch
Q 048184 46 LPPPGPKPWH---LIVNL---N-LIGQNLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPL 117 (512)
Q Consensus 46 ~~ppgP~~~p---~lG~~---~-~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~ 117 (512)
..+|.|+.+| ..+.- . .+..+++.++.++++++| ||+++..++ ++++|+|++.+++|++ +...|.+++..
T Consensus 12 ~~~~~p~~~p~~~~~~~~~~~~~~~~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~ 89 (421)
T 3lxh_A 12 HRVAPPPHVPGHLIREIDAYDLDGLEQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIW 89 (421)
T ss_dssp CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCS
T ss_pred cCCCCCCCCChhhccCCCCCCchhhhcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCccc
Confidence 3456666555 32211 1 334689999999988766 899998876 5899999999999995 44678777633
Q ss_pred hhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-H
Q 048184 118 LAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-F 196 (512)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~ 196 (512)
.........+.++ +..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.|. .++.+|+...+ .
T Consensus 90 ~~~~~~~~~~~~~-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~---------~~~~~d~~~~~~~ 158 (421)
T 3lxh_A 90 VPREAGEAYDMVP-TKLDPPEHTPYRKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFA---------DRGHCEFGSEFST 158 (421)
T ss_dssp SSHHHHHHCCCTT-TTCCTTTHHHHHHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTT---------TTSEEEHHHHTTT
T ss_pred CCcccccccccCC-ccCCcHHHHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHh---------hcCCeehHHHHHH
Confidence 2222122122333 444599999999999 7999999999999999999999999875 23468976655 5
Q ss_pred HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 048184 197 MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVL 276 (512)
Q Consensus 197 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 276 (512)
.++.++++. +||.+.+.. ..+......++.... .+|. ...++..+..+.+.+++.+++
T Consensus 159 ~~~~~v~~~-~~G~~~~~~--------~~~~~~~~~~~~~~~------~~p~-------~~~~~~~~~~~~~~~~~~~~i 216 (421)
T 3lxh_A 159 VFPVRVFLA-LAGLPVEDA--------TKLGLLANEMTRPSG------NTPE-------EQGRSLEAANKGFFEYVAPII 216 (421)
T ss_dssp THHHHHHHH-HHTCCGGGH--------HHHHHHHHHHHSCCC------SSHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCHHHH--------HHHHHHHHHHhcccc------CCCc-------hhHHHHHHHHHHHHHHHHHHH
Confidence 577777765 589775332 556666666554321 1221 224677788889999999999
Q ss_pred HHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHH
Q 048184 277 HEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATD 336 (512)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~ 336 (512)
+++++.. ..|+++.|+++..++ ..++++++..++ +|++||++|+|+++
T Consensus 217 ~~r~~~~---------~~dll~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~ 284 (421)
T 3lxh_A 217 AARRGGS---------GTDLITRILNVEIDG---KPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRR 284 (421)
T ss_dssp HHHTTCC---------CCSHHHHHHTSCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhCC---------CCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence 9887552 568999999876533 368888887665 99999999999999
Q ss_pred HHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCC
Q 048184 337 ELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPN 416 (512)
Q Consensus 337 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~ 416 (512)
|++ |++|||+|+||++|++ . .+|.+.+|++++||.||||+.|+++.+++||||++|+||+
T Consensus 285 E~~------------------~l~a~i~E~lRl~p~~-~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~ 344 (421)
T 3lxh_A 285 EPL------------------KLQRGVEELFRRFAVV-S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPM 344 (421)
T ss_dssp CHH------------------HHHHHHHHHHHHCCCB-E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTT
T ss_pred CHH------------------HHHHHHHHHHHhcCcc-C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcC
Confidence 986 8999999999999999 5 4599999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCC
Q 048184 417 EFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKN 495 (512)
Q Consensus 417 ~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (512)
+|+|||| +..++|||+|+|.|+|++||++|++++++.|+++| +++++++. +..+. .+.+ +...
T Consensus 345 ~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~---~~~~~--~~~~-~~~~ 408 (421)
T 3lxh_A 345 TVDLSRR----------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRA---VPIYH--SGIV-AAVE 408 (421)
T ss_dssp SCCTTCS----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTC---CCEEE--CSSB-CEEE
T ss_pred eeCCCCC----------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCC---Cceec--cccc-cCce
Confidence 9999995 34799999999999999999999999999999999 99998663 33322 2333 3344
Q ss_pred CceeeeccCCCC
Q 048184 496 PLLVVPKPRLPL 507 (512)
Q Consensus 496 ~~~v~~~~R~~~ 507 (512)
.++|+++||..+
T Consensus 409 ~lpv~~~p~~~~ 420 (421)
T 3lxh_A 409 NIPLEWEPQRVS 420 (421)
T ss_dssp CCEEECCCC---
T ss_pred eeeEEEeccccC
Confidence 799999998654
No 56
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=6.4e-54 Score=417.90 Aligned_cols=360 Identities=17% Similarity=0.182 Sum_probs=279.1
Q ss_pred CCCccHHHHHHHhhcCCceEEecC--CEeEEEcCCHHHHHHHHHhcccccCCCCch--------h-hhh-----hhccCC
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFG--LETVVVGSSAEVAELLLKTYDVTFASRPPL--------L-AWK-----HANYNY 127 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~--~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~--------~-~~~-----~~~~~~ 127 (512)
..+++.++.+++ +|||||++++| +.++++|+|++.+++++.++ .|.+++.. . ... ....++
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 467889999986 59999999987 67899999999999999864 67776531 1 100 011112
Q ss_pred cccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHH-HHHHHHHHHHHH
Q 048184 128 LVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKER-LFMFNLAIMSRM 206 (512)
Q Consensus 128 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~-~~~~~~~~~~~~ 206 (512)
.++++. +|+.|+++||.+ .+.|++..++.+.+.+.+.++++++.+.. . +++|+..+ +..+++++++.+
T Consensus 96 ~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--------~-g~~dl~~~~~~~~~~~vi~~~ 164 (425)
T 2z3t_A 96 NWLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRA--------Q-RRPDLVEGFAAPLPILVISAL 164 (425)
T ss_dssp TCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTT--------S-SSCBHHHHTTTHHHHHHHHHH
T ss_pred cccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh--------c-CCccHHHHHHHHHHHHHHHHH
Confidence 455555 499999999999 79999999999999999999999999853 2 37999875 478999999998
Q ss_pred HhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 048184 207 LFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRK 286 (512)
Q Consensus 207 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 286 (512)
||.+++.. ..+......+..... .+|. +....++..++.+.+.+++.++|++++++.
T Consensus 165 -~G~~~~~~--------~~~~~~~~~~~~~~~------~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--- 221 (425)
T 2z3t_A 165 -LGIPEEDH--------TWLRANAVALQEAST------TRAR-----DGRGYARAEAASQEFTRYFRREVDRRGGDD--- 221 (425)
T ss_dssp -HTCCGGGH--------HHHHHHHHHHHTTCT------TCCC--------HHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred -hCCCHHHH--------HHHHHHHHHHHhhcc------ccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 99886421 445555555543221 1121 111235667778888899998888776532
Q ss_pred cccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCc
Q 048184 287 LFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNK 346 (512)
Q Consensus 287 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~ 346 (512)
..|+++.|++...+ +..++++++..++ +|++||++|+|+++|++
T Consensus 222 ------~~dll~~ll~~~~~---~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------- 285 (425)
T 2z3t_A 222 ------RDDLLTLLVRARDT---GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------- 285 (425)
T ss_dssp --------CHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG-------
T ss_pred ------CCCHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH-------
Confidence 46899999987543 2368888887665 99999999999999863
Q ss_pred cccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCC
Q 048184 347 WVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGK 426 (512)
Q Consensus 347 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~ 426 (512)
|++|||+|+||++|+++ ..+|++.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.
T Consensus 286 -----------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-- 351 (425)
T 2z3t_A 286 -----------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA-- 351 (425)
T ss_dssp -----------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS--
T ss_pred -----------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC--
Confidence 89999999999999999 5679999999999999999999999999999999999999999999994
Q ss_pred CCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccC
Q 048184 427 EIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPR 504 (512)
Q Consensus 427 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 504 (512)
..++|||.|+|.|+|++||++|++++++.|+++| +++ +++. ...+ ..+.+.++..+++|++++.
T Consensus 352 --------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~---~~~~--~~~~~~~~~~~lpv~~~~~ 416 (425)
T 2z3t_A 352 --------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAH---EVEY--ADDMVFHGPTRLLLDLPDA 416 (425)
T ss_dssp --------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCE---EEEE--CSCSSBCCEEEEEECCC--
T ss_pred --------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCC---cccc--ccccccCCcceeeEEecch
Confidence 3689999999999999999999999999999999 999 6542 1122 2345567777899998776
No 57
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=7.2e-55 Score=433.41 Aligned_cols=405 Identities=15% Similarity=0.156 Sum_probs=276.5
Q ss_pred CCCCCCCCCCCceeeecccc-----CC-CccHHHHHHHhhcCC-ceEEecCCE-------eEEEcCCHHHHHHHHHhc--
Q 048184 44 NLLPPPGPKPWHLIVNLNLI-----GQ-NLHVSLQSLSQKYGP-LMQLKFGLE-------TVVVGSSAEVAELLLKTY-- 107 (512)
Q Consensus 44 ~~~~ppgP~~~p~lG~~~~~-----~~-~~~~~~~~~~~kyG~-v~~~~~~~~-------~~vvi~d~~~~~~i~~~~-- 107 (512)
+.+.||||+++|++|+++.+ .. +++.++.++++|||+ ||++++++. ..+++.+....+.++...
T Consensus 7 Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~ 86 (473)
T 3dan_A 7 PLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSKV 86 (473)
T ss_dssp CBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcce
Confidence 34679999999999998875 45 889999999999999 999998633 445556655554444311
Q ss_pred --ccccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 048184 108 --DVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSS 185 (512)
Q Consensus 108 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 185 (512)
...+...... ............++..+|+.|+++|+.+ .+.|+++ ++.+.+.+.+.++++++.|..... +
T Consensus 87 ~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~-----~ 158 (473)
T 3dan_A 87 EKKDLFTGTYMP-STKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAELA-----K 158 (473)
T ss_dssp ECSSCTTSSSCC-CGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-----H
T ss_pred eccccccccccC-CccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-----c
Confidence 1111111111 1111111112334455699999999999 7999984 899999999999999999976433 3
Q ss_pred CCceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccc-ccccccc-------ch
Q 048184 186 STPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPW-LAFLDLQ-------GN 257 (512)
Q Consensus 186 ~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~~~~~-------~~ 257 (512)
++++|+.+++..+++++++.++||.+++..+ ....+......+........+...+|. +..+... ..
T Consensus 159 ~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~ 233 (473)
T 3dan_A 159 NGKAAFNDVGEQAAFRFLGRAYFNSNPEETK-----LGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLI 233 (473)
T ss_dssp HSCEECHHHHHHHHHHHHHHHHHSCCGGGST-----TTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGT
T ss_pred CCcccHHHHHHHHHHHHHHHHHcCCCCCchh-----hhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhh
Confidence 5689999999999999999999999987621 223333433333211000000112221 1111000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-HHhc-CHHHHHHHH
Q 048184 258 IKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-QLLK-NPEVIQKAT 335 (512)
Q Consensus 258 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-~L~~-~p~~~~~l~ 335 (512)
.+...+..+.+.+++..++++.... +-...++++.++-...-+ +..-+...+...+ +|+. ||++|++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~ll~~~~~~-------~l~~~ei~~~~l~~~g~~--~~~tta~~l~~~l~~L~~~~P~~~~~lr 304 (473)
T 3dan_A 234 KSTYNKLYDYFQSVATPVMEQAEKL-------GVPKDEAVHNILFAVCFN--TFGGVKILFPNTLKWIGLAGENLHTQLA 304 (473)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHH-------TCCHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hhchhhhHHHHHHHHHHHHHhHhhc-------CCCHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 1222233333344444455443322 123344544332211000 0011223333333 9999 799999999
Q ss_pred HHHHHHhcC-C-ccccccCCCCChhHHHHHHhhhhcCCCccccCCcccccccee----cCcccCCCCEEEEehhhhccCC
Q 048184 336 DELDRVIGR-N-KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKV----AGSNILKNSRVIVNVWAIGRDP 409 (512)
Q Consensus 336 ~Ei~~~~~~-~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~ 409 (512)
+|++++++. . +.++++++++||||+|||+|+||++|+++... |.+.+|+++ +||.||||+.|.++.+++|+||
T Consensus 305 ~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp 383 (473)
T 3dan_A 305 EEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDP 383 (473)
T ss_dssp HHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCT
T ss_pred HHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCEEEechHHhhCCc
Confidence 999999775 3 67899999999999999999999999999987 779999999 9999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccceeccCCCC---------CCCcchHHHHHHHHHHHHHHHhhceeecCCC
Q 048184 410 TLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGR---------RMCVGYALGLKIVQSTLANLLHGFEWKLPGD 475 (512)
Q Consensus 410 ~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~---------r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~ 475 (512)
++|+||++|||+||++++ .....++|||.|+ |.|||++||.+|++++++.|+++|++....+
T Consensus 384 ~~~~dp~~F~p~R~~~~~----~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 454 (473)
T 3dan_A 384 KVFDRPEEYVPDRFVGDG----EALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL 454 (473)
T ss_dssp TTSSSTTSCCTTTTSGGG----GGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred hhcCCcccCCccccCCCc----ccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence 999999999999999762 1234455555555 9999999999999999999999999776543
No 58
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=6.4e-53 Score=407.43 Aligned_cols=349 Identities=19% Similarity=0.219 Sum_probs=277.6
Q ss_pred cCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCchhh-hhhhccCCccc-ccCCCC---
Q 048184 63 IGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPLLA-WKHANYNYLVM-PGAPYG--- 136 (512)
Q Consensus 63 ~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g--- 136 (512)
+..+++.++.++ ++|||||++++ +++++++|+|++++++++.++ .|.+++.... ..... .+.+. ++..+|
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~ 99 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAE 99 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCC
Confidence 457899999999 89999999996 889999999999999999864 4666544321 11111 23341 344469
Q ss_pred ---hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhcccc
Q 048184 137 ---PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRY 212 (512)
Q Consensus 137 ---~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~ 212 (512)
+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+.. .++++|+..++ ..+++++++. +||.++
T Consensus 100 ~~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--------~g~~~d~~~~~~~~~~~~vi~~-~~G~~~ 169 (404)
T 2xbk_A 100 SGRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA--------QGPPGDLHGELTVPFALTVLCE-VIGVPP 169 (404)
T ss_dssp HHHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH--------TCSSEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred CCCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCeeHHHHHHHHHHHHHHHH-HhCCCH
Confidence 9999999999 79999999999999999999999999973 34579998766 5799999997 799876
Q ss_pred CcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 048184 213 TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHG 292 (512)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 292 (512)
+.. +.+......+.... .| + +..++.+.+.+++.++|+++++..
T Consensus 170 ~~~--------~~~~~~~~~~~~~~--------~~------p-----~~~~~~~~~~~~~~~~i~~r~~~~--------- 213 (404)
T 2xbk_A 170 QRR--------AELTTLLAGIAKLD--------DR------E-----GAVRAQDDLFGYVAGLVEHKRAEP--------- 213 (404)
T ss_dssp GGH--------HHHHHHHHHHTBSS--------CH------H-----HHHHHHHHHHHHHHHHHHHHHHSC---------
T ss_pred HHH--------HHHHHHHHHHHhcc--------Cc------H-----HHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 321 44555544443211 00 1 456677888999999999887653
Q ss_pred cccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccC
Q 048184 293 TNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKD 352 (512)
Q Consensus 293 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 352 (512)
..|+++.| + + + .++++++..++ +|++||++|+|+++|++
T Consensus 214 ~~dll~~l-~----~--~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------- 272 (404)
T 2xbk_A 214 GPDIISRL-N----D--G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------- 272 (404)
T ss_dssp CSSHHHHH-H----S--S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-------------
T ss_pred CCCHHHHh-h----c--C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------
Confidence 35899988 2 1 2 67888877655 99999999999999974
Q ss_pred CCCChhHHHHHHhhhhcCCCcc-ccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcc
Q 048184 353 IVNLPYIQAIVKEVMRLHPPLT-LLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVV 431 (512)
Q Consensus 353 l~~lp~l~a~i~EtlRl~~~~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~ 431 (512)
|++|||+|+||++|+++ ...+|++.+|++++||.||||+.|+++.+++|+||++|+||++|+||||.
T Consensus 273 -----~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------- 340 (404)
T 2xbk_A 273 -----VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------- 340 (404)
T ss_dssp -----HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS-------
T ss_pred -----HHHHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC-------
Confidence 79999999999999999 45679999999999999999999999999999999999999999999983
Q ss_pred cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184 432 GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP 501 (512)
Q Consensus 432 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 501 (512)
..++|||+|+|.|+|++||++|++++++.|+++| +++++++. ..+.+ ..+.+++....++|++
T Consensus 341 ---~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~ 404 (404)
T 2xbk_A 341 ---NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPV--EQLRL--KEGQLSGGFAELRVVW 404 (404)
T ss_dssp ---CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CSSBTTCCBSCCEEEC
T ss_pred ---CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCC--Cccee--ccCcccCCcceeeeeC
Confidence 3689999999999999999999999999999999 79997542 12223 2345556666777763
No 59
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=3.7e-54 Score=418.06 Aligned_cols=357 Identities=15% Similarity=0.130 Sum_probs=281.0
Q ss_pred CCCccHHHHHHHhhcCCce-----EEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchh-hhh--hh-c-cCCcccccC
Q 048184 64 GQNLHVSLQSLSQKYGPLM-----QLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLL-AWK--HA-N-YNYLVMPGA 133 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~-----~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 133 (512)
..+++.++.++ ++||||| ++++ .++++|+|++.+++++.++ ..|++++... ... .. . ..+.++++.
T Consensus 24 ~~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 46889999998 4799999 8876 4789999999999999875 5688775432 111 11 1 224556655
Q ss_pred CCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHH-HHHHHHHHHHHHHHHhcccc
Q 048184 134 PYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLK-ERLFMFNLAIMSRMLFGKRY 212 (512)
Q Consensus 134 ~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~ 212 (512)
+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|... +.+|+. +++..+++++++. +||.++
T Consensus 100 -~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~---------~~vdl~~~~~~~~~~~vi~~-~~G~~~ 167 (414)
T 2uuq_A 100 -DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRAN---------GGGDIVTELFKPLPSMVVAH-YLGVPE 167 (414)
T ss_dssp -CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHT---------TEEEHHHHTTTHHHHHHHHH-HTTCCG
T ss_pred -CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc---------CCccHHHHHHHHhHHHHHHH-HhCCCH
Confidence 599999999999 799999999999999999999999999742 359997 5678999999999 699887
Q ss_pred CcccccCCCChhHHHHHHHHHHhccCCCCccccc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 048184 213 TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAI-PWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEH 291 (512)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 291 (512)
+.. +.+....+.+... ..+ |.. .+..++.+++.+++.++|++++++.
T Consensus 168 ~~~--------~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~~-------- 215 (414)
T 2uuq_A 168 EDW--------TQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTEP-------- 215 (414)
T ss_dssp GGH--------HHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTTSC--------
T ss_pred HHH--------HHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhCC--------
Confidence 522 3444444444331 011 211 1234566778888899888876432
Q ss_pred CcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCcccccc
Q 048184 292 GTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEK 351 (512)
Q Consensus 292 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 351 (512)
..|+++.|++...++ .+..++++++..++ +|++||++|+|+++|+
T Consensus 216 -~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------- 280 (414)
T 2uuq_A 216 -ADDAISHLVAAGVGA-DGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------- 280 (414)
T ss_dssp -CSSHHHHHHHTTTTC-TTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------
T ss_pred -CCCHHHHHHhccccc-CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------
Confidence 468999999875411 13368888887765 8999999999999986
Q ss_pred CCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCCCc
Q 048184 352 DIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLW-EKPNEFCPERFVGKEIDV 430 (512)
Q Consensus 352 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~ 430 (512)
+|++|||+|+||++|+++ ..+|.+.+|++++||.||||+.|.++.+++|+||++| +||++|+||||.
T Consensus 281 -----~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~------ 348 (414)
T 2uuq_A 281 -----EGIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP------ 348 (414)
T ss_dssp -----GGHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC------
T ss_pred -----HHHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC------
Confidence 389999999999999999 5679999999999999999999999999999999999 999999999984
Q ss_pred ccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 431 VGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 431 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++ ++.+ ..+.++++..+++|+++||.
T Consensus 349 ----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~~~~--~~~~~~~~~~~lpv~~~~r~ 414 (414)
T 2uuq_A 349 ----RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES----RIVW--SGGSYVRRPLSVPFRVTSSR 414 (414)
T ss_dssp ----CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----GCEE--CCCSSBCCEEECEEEEC---
T ss_pred ----CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----Cccc--cccccccCcceeEEEecCCC
Confidence 2589999999999999999999999999999999 6999732 2333 23456677789999999873
No 60
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=3.1e-53 Score=411.48 Aligned_cols=368 Identities=17% Similarity=0.205 Sum_probs=282.9
Q ss_pred CCCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhh----
Q 048184 47 PPPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWK---- 121 (512)
Q Consensus 47 ~ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~---- 121 (512)
..+||. .|+- ..+..+++.++.+|+ +|||||++++ +++++++|+|++++++++.++ .|.+++......
T Consensus 8 ~~~g~~-~~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~ 80 (413)
T 2z36_A 8 ELAGLE-LPVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTL 80 (413)
T ss_dssp --CCCE-ECCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSC
T ss_pred Hhcccc-CCCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccc
Confidence 356765 2432 345678999999997 7899999997 889999999999999999863 577665321111
Q ss_pred h-hcc----CCcc-cccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH
Q 048184 122 H-ANY----NYLV-MPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL 195 (512)
Q Consensus 122 ~-~~~----~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~ 195 (512)
. ... ++.+ +++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+... .++++|+...+
T Consensus 81 ~~~~~~~~~~~~~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-------~~~~~d~~~~~ 151 (413)
T 2z36_A 81 DAATLQQLRSQPPLMLGM-DGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLAT-------DQRPVDLVQAL 151 (413)
T ss_dssp CHHHHHHHTTSCCCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTC-------SCSSEEHHHHT
T ss_pred cccccccccccccccccc-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCccHHHHH
Confidence 0 111 2445 5554 599999999999 799999999999999999999999998631 25679998665
Q ss_pred H-HHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHH
Q 048184 196 F-MFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEH 274 (512)
Q Consensus 196 ~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~ 274 (512)
. .+++++++.+ ||.+++.. +.+......+... ..| ++..++.+.+.+++.+
T Consensus 152 ~~~~~~~vi~~~-~G~~~~~~--------~~~~~~~~~~~~~--------~~~-----------~~~~~~~~~~~~~~~~ 203 (413)
T 2z36_A 152 SLPVPSLVICEL-LGVPYTDH--------DFFQSRTTMMVSR--------TSM-----------EDRRRAFAELRAYIDD 203 (413)
T ss_dssp TTHHHHHHHHHH-HTCCGGGH--------HHHHHHHHHTTCS--------SCH-----------HHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHH-hCCCHHHH--------HHHHHHHHHHhcc--------cCc-----------HHHHHHHHHHHHHHHH
Confidence 4 6999999984 99876421 3343333322110 001 4566777888999999
Q ss_pred HHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHH
Q 048184 275 VLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKA 334 (512)
Q Consensus 275 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l 334 (512)
++++++++. ..|+++.|+++..+ +..++++++..++ +|+.||++|+|+
T Consensus 204 ~i~~r~~~~---------~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l 271 (413)
T 2z36_A 204 LITRKESEP---------GDDLFSRQIARQRQ---EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVV 271 (413)
T ss_dssp HHHHHHSSC---------CSSHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHhCC---------CCCHHHHHHHhhcC---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 999887542 35899999976421 2368888887665 999999999999
Q ss_pred HHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCC
Q 048184 335 TDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEK 414 (512)
Q Consensus 335 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~ 414 (512)
++|++ |++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+||++|+|
T Consensus 272 ~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~d 333 (413)
T 2z36_A 272 KANPG------------------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKD 333 (413)
T ss_dssp HHCGG------------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSS
T ss_pred HhChH------------------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCC
Confidence 99863 799999999999999996667999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCccccc
Q 048184 415 PNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSR 493 (512)
Q Consensus 415 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (512)
|++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| +++++++. +++.+.. +...+-
T Consensus 334 P~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~--~~~~~g 399 (413)
T 2z36_A 334 PAVLDVERGA----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPM--EDVPFKG--DSVIYG 399 (413)
T ss_dssp TTSCCTTCCC----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGSCBCT--TSSSCC
T ss_pred ccccCCCCCC----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCc--ccceecc--cccccC
Confidence 9999999983 2579999999999999999999999999999999 68997652 2223322 233344
Q ss_pred CCCceeeec
Q 048184 494 KNPLLVVPK 502 (512)
Q Consensus 494 ~~~~~v~~~ 502 (512)
...++|++.
T Consensus 400 ~~~lpv~~~ 408 (413)
T 2z36_A 400 VHELPVTWH 408 (413)
T ss_dssp BSCCEEECC
T ss_pred cceeeEEee
Confidence 446666654
No 61
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=2.2e-53 Score=411.70 Aligned_cols=332 Identities=17% Similarity=0.180 Sum_probs=269.1
Q ss_pred ccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHH
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQ 141 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 141 (512)
.+..+++.++.+|+++ |||+++..++ +.++|+|++++++++.+. ..|.+++...........+ ..++..+|+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~~g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQ-FIPLQQDGAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHC-CTTTTCCHHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccc-cCccccCCcHHHH
Confidence 3457899999999999 9999999875 588999999999999754 5787776322221111111 2344556999999
Q ss_pred HHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCcccccCC
Q 048184 142 TRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEEDENNI 220 (512)
Q Consensus 142 ~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~ 220 (512)
+||.+ .+.|++..++.+.+.+.+.++++++.|.. ++.+|+...+ ..++.++++. +||.+....
T Consensus 97 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~----- 160 (396)
T 3oft_A 97 FRTPV-MKGLASRFVVALEPKVQAVARKLMESLRP---------RGSCDFVSDFAEILPLNIFLT-LIDVPLEDR----- 160 (396)
T ss_dssp HHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGG---------GSEEEHHHHTTTTHHHHHHHH-HTTCCGGGH-----
T ss_pred HHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh---------cCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-----
Confidence 99999 79999999999999999999999999863 2368887666 5566666665 688765322
Q ss_pred CChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHH
Q 048184 221 VTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVL 300 (512)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~l 300 (512)
..+......+..... .++..+..+.+.+++.++|+++++.. ..|+++.|
T Consensus 161 ---~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~d~l~~l 209 (396)
T 3oft_A 161 ---PRLRQLGVQLTRPDG-------------------SMTVEQLKQAADDYLWPFIEKRMAQP---------GDDLFSRI 209 (396)
T ss_dssp ---HHHHHHHHHHHSCCS-------------------SCCHHHHHHHHHHHHHHHHHHHHHSC---------CSSHHHHH
T ss_pred ---HHHHHHHHHHhCCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCHHHHH
Confidence 445555555442211 12456677889999999999888653 46899999
Q ss_pred hcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHH
Q 048184 301 LQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQ 360 (512)
Q Consensus 301 l~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~ 360 (512)
+++..++ ..++++++..++ +|++||++|+|+++|++ |++
T Consensus 210 l~~~~~~---~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~ 268 (396)
T 3oft_A 210 LSEPVGG---RPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIP 268 (396)
T ss_dssp HTSCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHH
T ss_pred HHhhccC---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHH
Confidence 9876533 368888887655 99999999999999975 899
Q ss_pred HHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceecc
Q 048184 361 AIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPF 440 (512)
Q Consensus 361 a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~F 440 (512)
|||+|+||++|++ . .+|++.+|++++||.||||+.|+++.+++||||++|+||++|+||||+. +..++||
T Consensus 269 a~i~E~lRl~p~~-~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~F 338 (396)
T 3oft_A 269 AAADELMRRYPTV-A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTM 338 (396)
T ss_dssp HHHHHHHHHCCCB-E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTT
T ss_pred HHHHHHHHhcCcc-c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccC
Confidence 9999999999999 4 5699999999999999999999999999999999999999999999963 3589999
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCC
Q 048184 441 GSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGD 475 (512)
Q Consensus 441 g~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 475 (512)
|+|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 339 G~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~ 374 (396)
T 3oft_A 339 GVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPD 374 (396)
T ss_dssp CCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSS
T ss_pred CCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence 9999999999999999999999999999 9999866
No 62
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=9e-53 Score=410.77 Aligned_cols=358 Identities=15% Similarity=0.182 Sum_probs=284.6
Q ss_pred CCccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHHhcccccCCCCch--h-hhhhhccCCcccccCC
Q 048184 65 QNLHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLKTYDVTFASRPPL--L-AWKHANYNYLVMPGAP 134 (512)
Q Consensus 65 ~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 134 (512)
.+++.++.+|+ +|||||+++++ ++++++|+|++.+++++.++ ..|.+++.. . ........+.++++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~- 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL- 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-
Confidence 56888999995 69999999986 66899999999999999865 468777531 1 111111113455555
Q ss_pred CChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccC
Q 048184 135 YGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYT 213 (512)
Q Consensus 135 ~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~ 213 (512)
+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.|.... ++.++|+..++ ..+++++++.+ ||.+++
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~------~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~ 192 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANN------PDRQADLVSELAGPLPLQIICDM-MGIPKA 192 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHC------TTSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCcEehHHHHHHHHHHHHHHHH-cCCCHH
Confidence 599999999999 7999999999999999999999999997641 34579999766 78999999999 999874
Q ss_pred cccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 048184 214 EEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGT 293 (512)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 293 (512)
.. +.+......+.... .|++. ...++..++.+.+.+++.++|++++++. .
T Consensus 193 ~~--------~~~~~~~~~~~~~~--------~p~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~ 242 (435)
T 2wm5_A 193 DH--------QRIFHWTNVILGFG--------DPDLA-----TDFDEFMQVSADIGAYATALAEDRRVNH---------H 242 (435)
T ss_dssp GH--------HHHHHHHHHHHHTT--------CTTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHSC---------C
T ss_pred HH--------HHHHHHHHHHhccC--------Ccchh-----hhHHHHHHHHHHHHHHHHHHHHHHhcCC---------C
Confidence 32 45555555555421 13211 1125677788899999999999887642 4
Q ss_pred ccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCC
Q 048184 294 NDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDI 353 (512)
Q Consensus 294 ~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 353 (512)
.|+++.|+++..+ +..++++++..++ +|++||++|+++++|++
T Consensus 243 ~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------- 305 (435)
T 2wm5_A 243 DDLTSSLVEAEVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-------------- 305 (435)
T ss_dssp SSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH--------------
T ss_pred CCHHHHHHhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH--------------
Confidence 6899999987543 2368888887665 89999999999999986
Q ss_pred CCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccC
Q 048184 354 VNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGH 433 (512)
Q Consensus 354 ~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~ 433 (512)
+|++|||+|+||++|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|||| +
T Consensus 306 ---~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~------- 372 (435)
T 2wm5_A 306 ---GLAPTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P------- 372 (435)
T ss_dssp ---HHHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S-------
T ss_pred ---hHHHHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C-------
Confidence 389999999999999999 466999999999999999999999999999999999999999999994 1
Q ss_pred ccceeccCC-CCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184 434 NFELLPFGS-GRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP 501 (512)
Q Consensus 434 ~~~~~~Fg~-G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 501 (512)
..++|||+ |+|.|+|++||++|++++++.|+++|+ ++++++. .+ ..+...+....++|++
T Consensus 373 -~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~-----~~--~~~~~~~~~~~lpv~~ 434 (435)
T 2wm5_A 373 -NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEP-----AR--LLSQFIHGIKTLPVTW 434 (435)
T ss_dssp -CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC-----EE--CCCSSBCCEEECEEEC
T ss_pred -CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCCc-----cc--cccccccCccceeEEe
Confidence 36899999 999999999999999999999999997 9997531 22 2233344445677765
No 63
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=1.9e-52 Score=403.42 Aligned_cols=349 Identities=15% Similarity=0.177 Sum_probs=279.9
Q ss_pred cCCCccHHHHHHHhhcCCceEEecCC----EeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChh
Q 048184 63 IGQNLHVSLQSLSQKYGPLMQLKFGL----ETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPH 138 (512)
Q Consensus 63 ~~~~~~~~~~~~~~kyG~v~~~~~~~----~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 138 (512)
+..+++.++.++ ++||||+++++++ +++++|+||++++++++ +...|.+++.......... +.+.++..+|+.
T Consensus 10 ~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~ 86 (384)
T 3oo3_A 10 LRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRAL-LPGILQAYDPPD 86 (384)
T ss_dssp ETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CC-CTTCGGGCCTTH
T ss_pred cccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccccc-cccccccCCChh
Confidence 367899999999 5999999999876 89999999999999995 5567888775443322222 233445556999
Q ss_pred HHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhccccCccccc
Q 048184 139 WRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFGKRYTEEDEN 218 (512)
Q Consensus 139 w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~ 218 (512)
|+++|+.+ .+.|++..++.+.+.+.+.++++++.|.. .++++|+.+++...+.+.+...+||.+.+..
T Consensus 87 ~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~--- 154 (384)
T 3oo3_A 87 HTRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFES--------VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ--- 154 (384)
T ss_dssp HHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH--------SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH---
T ss_pred HHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH---
Confidence 99999999 79999999999999999999999999964 3567999999999888888888999886432
Q ss_pred CCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHH
Q 048184 219 NIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVD 298 (512)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~ 298 (512)
..+...+..+... ...++..+..+.+.+++.+++++++++. ..|+++
T Consensus 155 -----~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~d~l~ 201 (384)
T 3oo3_A 155 -----AELSRMIRESRES-------------------RLPRQRTLSGLGIVNYTKRLTSGKRRDP---------GDGMIG 201 (384)
T ss_dssp -----HHHHHHHHHHHHC-------------------SCHHHHHHHHHHHHHHHHHHHHHHHHSC---------CSSHHH
T ss_pred -----HHHHHHHHHHhcc-------------------CChHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCHHH
Confidence 4555555555440 1125667788889999999998887543 468999
Q ss_pred HHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChh
Q 048184 299 VLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPY 358 (512)
Q Consensus 299 ~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~ 358 (512)
.+++.. +..++++++..++ +|++||++|+++++|++.
T Consensus 202 ~ll~~~-----~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------ 258 (384)
T 3oo3_A 202 VIVREH-----GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------ 258 (384)
T ss_dssp HHHHHH-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------
T ss_pred HHHHhc-----CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------
Confidence 999861 2368888887655 999999999999999874
Q ss_pred HHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcccee
Q 048184 359 IQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELL 438 (512)
Q Consensus 359 l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~ 438 (512)
++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++|+ +||++|+|||| +..++
T Consensus 259 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~----------~~~~~ 323 (384)
T 3oo3_A 259 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE----------KATHM 323 (384)
T ss_dssp HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS----------CCCCC
T ss_pred HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC----------CCCcC
Confidence 8999999999999999777799999999999999999999999999999 89999999996 24789
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceee
Q 048184 439 PFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVV 500 (512)
Q Consensus 439 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 500 (512)
|||+|+|.|+|++||++|++++++.|+++| |++++++. .++.+.. .+.+.+....++|+
T Consensus 324 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~-~~~~~~~~~~lpv~ 383 (384)
T 3oo3_A 324 AFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPE--EDLRFKP-GRPAPFAVEELPLE 383 (384)
T ss_dssp TTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCEEC-SSSSCCEESCCEEE
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCC--ccceeec-ccccccCcceeeee
Confidence 999999999999999999999999999999 99998652 2223321 03444555566665
No 64
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=3.9e-53 Score=410.45 Aligned_cols=353 Identities=16% Similarity=0.164 Sum_probs=276.6
Q ss_pred CCCccHHHHHHHhhcCCceEEecCC--EeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc-c-CC-cccccCCCChh
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKFGL--ETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN-Y-NY-LVMPGAPYGPH 138 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~~~--~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~g~~ 138 (512)
..+++.++.++++ ||||+++...| .++++|++++++++++++. ..|++++......... . .. ...++..+|+.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 113 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ 113 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence 4689999999987 99999997444 6899999999999999643 5677765432221110 0 01 22334455999
Q ss_pred HHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCcccc
Q 048184 139 WRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEEDE 217 (512)
Q Consensus 139 w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~ 217 (512)
|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .+.+|+..++ ..+++++++. +||.+.+.
T Consensus 114 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--- 179 (415)
T 3mgx_A 114 HRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLD---------GEVCDAATAIGPRIPAAVVCE-ILGVPAED--- 179 (415)
T ss_dssp HHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSS---------SSCEESTTTTTTHHHHHHHHH-HHTCCGGG---
T ss_pred HHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh---------cCCcchHHHHHHHHHHHHHHH-HcCCCHHH---
Confidence 99999998 79999999999999999999999987742 3369998877 6799999998 58865422
Q ss_pred cCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHH
Q 048184 218 NNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIV 297 (512)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l 297 (512)
...+....+.+..... ....| . ...++.+++.+++.++|++++++. ..|++
T Consensus 180 -----~~~~~~~~~~~~~~~~----~~~~~-------~----~~~~~~~~l~~~~~~~i~~rr~~~---------~~dll 230 (415)
T 3mgx_A 180 -----EDMLIDLTNHAFGGED----ELFDG-------M----TPRQAHTEILVYFDELITARRKEP---------GDDLV 230 (415)
T ss_dssp -----HHHHHHHHHHHTSCCC--------C-------C----CHHHHHHHHHHHHHHHHHHHHHSC---------CSSHH
T ss_pred -----HHHHHHHHHHHHcccC----cccch-------H----HHHHHHHHHHHHHHHHHHHHHhCC---------CCCHH
Confidence 1555555555543211 11111 1 112567888999999999887653 46899
Q ss_pred HHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCCh
Q 048184 298 DVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLP 357 (512)
Q Consensus 298 ~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp 357 (512)
+.|+++. .++++++..++ +|+.||++|+++++|+ |
T Consensus 231 ~~ll~~~-------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~ 285 (415)
T 3mgx_A 231 STLVTDD-------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------A 285 (415)
T ss_dssp HHHHHCT-------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------S
T ss_pred HHHHhCC-------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------H
Confidence 9999764 46777776654 9999999999999985 6
Q ss_pred hHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccce
Q 048184 358 YIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFEL 437 (512)
Q Consensus 358 ~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~ 437 (512)
|++|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+||. ..+
T Consensus 286 ~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~ 354 (415)
T 3mgx_A 286 DVDTVVEEVLRWTSPAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRH 354 (415)
T ss_dssp CHHHHHHHHHHHHCCBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCC
T ss_pred hHHHHHHHHHHhcCcccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCC
Confidence 999999999999999996 469999999999999999999999999999999999999999999972 368
Q ss_pred eccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccC
Q 048184 438 LPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPR 504 (512)
Q Consensus 438 ~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 504 (512)
+|||+|+|.|+|++||++|++++++.|+++| +++++.+. .+ ..+...+....++|++++|
T Consensus 355 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~--~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 355 ITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREP-----AW--LRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp CTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC-----EE--CSCSSBCCEEECEEEEEEC
T ss_pred CCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCc-----cc--ccCCcccCceeeeEEEecC
Confidence 9999999999999999999999999999999 99997431 11 2233345556889999887
No 65
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4e-52 Score=408.37 Aligned_cols=364 Identities=16% Similarity=0.200 Sum_probs=279.2
Q ss_pred ccHHHHHHHhhcCCce--EEe-cCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc-------------cCCccc
Q 048184 67 LHVSLQSLSQKYGPLM--QLK-FGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN-------------YNYLVM 130 (512)
Q Consensus 67 ~~~~~~~~~~kyG~v~--~~~-~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 130 (512)
++..+.++ ++||||+ ++. +++.++++|++++++++++++. ..|++++......... ..+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 88889888 6789999 888 6788999999999999999765 6787776432211100 011234
Q ss_pred ccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhc
Q 048184 131 PGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFG 209 (512)
Q Consensus 131 ~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG 209 (512)
+..+|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+.. .++++|+..++ ..+++++++.+ ||
T Consensus 125 -~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--------~~~~~dl~~~~~~~~~~~vi~~l-~G 193 (450)
T 3tkt_A 125 -VQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLG--------AGEEGDFMALVAAPYPLHVVMQI-LG 193 (450)
T ss_dssp -GGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHH--------TCSEEEHHHHTTTHHHHHHHHHH-TT
T ss_pred -ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCEeeHHHHHHHHHHHHHHHH-cC
Confidence 444599999999999 79999999999999999999999999975 25689998887 69999999985 99
Q ss_pred cccCcccccCCCChhHHHHHHHHHHhccCCCCcccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 048184 210 KRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLD-LQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLF 288 (512)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 288 (512)
.+.+.. ..+....+.+..... ...+++..++. +....++..+..+.+.+++.+++++++++.
T Consensus 194 ~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----- 256 (450)
T 3tkt_A 194 VPPEDE--------PKMLFLTQQMFGGQD----EDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP----- 256 (450)
T ss_dssp CCGGGH--------HHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-----
T ss_pred CChhHH--------HHHHHHHHHHhcccc----chhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 765321 444444444332211 12223322221 123346777888899999999999988653
Q ss_pred cCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccc
Q 048184 289 KEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWV 348 (512)
Q Consensus 289 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~ 348 (512)
..|+++.|+++..++ ..++++++..++ +|++||++|+|+++|+
T Consensus 257 ----~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~---------- 319 (450)
T 3tkt_A 257 ----TDDVATVIANAVVDG---EPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR---------- 319 (450)
T ss_dssp ----CSSHHHHHHTCEETT---EECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------
T ss_pred ----CCCHHHHHHhccccC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH----------
Confidence 468999999876532 368888887665 9999999999999986
Q ss_pred cccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCC
Q 048184 349 EEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEI 428 (512)
Q Consensus 349 ~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~ 428 (512)
+|++|||+|+||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.
T Consensus 320 --------~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~---- 386 (450)
T 3tkt_A 320 --------NLLPGIVEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA---- 386 (450)
T ss_dssp --------GGHHHHHHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----
T ss_pred --------HHHHHHHHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----
Confidence 3899999999999999995 569999999999999999999999999999999999999999999952
Q ss_pred CcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 429 DVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 429 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
..++|||+|+|.|+|++||++|++++++.|+++|+ ++++++. .+. .+...+....++|++++
T Consensus 387 ------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~~--~~~~~~g~~~lpv~~~~ 449 (450)
T 3tkt_A 387 ------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEP-----KRV--NSTFVGGFKSLPMRWKA 449 (450)
T ss_dssp ------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSCC-----EEC--CCSSBCCEEECEEEEEE
T ss_pred ------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCCc-----ccc--cCcccCCcccceEEEec
Confidence 36899999999999999999999999999999998 7776331 121 22233434477787764
No 66
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=1.4e-52 Score=409.03 Aligned_cols=363 Identities=18% Similarity=0.252 Sum_probs=281.6
Q ss_pred ccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhc--------cCCcccccC
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHAN--------YNYLVMPGA 133 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 133 (512)
.+..+++.++.++ ++||||+++++| +++|++++++++++++. ..+..++......... ..+.++++.
T Consensus 26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (418)
T 3r9b_A 26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL 100 (418)
T ss_dssp GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence 3468899999988 678999998775 89999999999999754 3444444322221111 123345555
Q ss_pred CCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhcccc
Q 048184 134 PYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRY 212 (512)
Q Consensus 134 ~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~ 212 (512)
+ |+.|+++||.+ .+.|+++.++.+.+.+.++++++++ +. .++.+|+...+ ..+++++++. +||.+.
T Consensus 101 d-g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~---------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 167 (418)
T 3r9b_A 101 D-PPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AV---------DGPEFNLIDNLAYPLPVAVICR-LLGVPI 167 (418)
T ss_dssp C-TTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TC---------CSSEEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred C-CchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hh---------ccCCeehHHHHhCcCCHHHHHH-HcCCCH
Confidence 4 99999999999 7999999999999999999999998 63 23479986554 6899999999 899887
Q ss_pred CcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 048184 213 TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHG 292 (512)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 292 (512)
+.. ..+......+...... ++.+.++ +....++..+..+.+.+++.+++++++++.
T Consensus 168 ~~~--------~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------- 223 (418)
T 3r9b_A 168 EDE--------PKFSRASALLAAALDP------FLALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRTP--------- 223 (418)
T ss_dssp GGH--------HHHHHHHHHHHHTTSC------HHHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTSC---------
T ss_pred HHH--------HHHHHHHHHHHhhcCc------ccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 432 4455555544432211 1111111 123346778888899999999998877542
Q ss_pred cccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccC
Q 048184 293 TNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKD 352 (512)
Q Consensus 293 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 352 (512)
..|+++.|++...+ +..++++++..++ +|++||++|+++++|++
T Consensus 224 ~~d~l~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------- 287 (418)
T 3r9b_A 224 GEDLMSGLVAVEES---GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------- 287 (418)
T ss_dssp CSSHHHHHHHHHHH---SSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-------------
T ss_pred CccHHHHHHHhhhc---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-------------
Confidence 56899999977432 2258888887665 99999999999999865
Q ss_pred CCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCccc
Q 048184 353 IVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVG 432 (512)
Q Consensus 353 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~ 432 (512)
|++|||+|+||++|+++... |++.+|++++|+.||||+.|.++.+++|+||++|+||++|+|||+
T Consensus 288 -----~l~a~i~E~lRl~p~~~~~~-R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~--------- 352 (418)
T 3r9b_A 288 -----RASAVIEETMRYDPPVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA--------- 352 (418)
T ss_dssp -----GHHHHHHHHHHHSCSBCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS---------
T ss_pred -----hHHHHHHHHHHhCCccccce-eEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC---------
Confidence 79999999999999999865 999999999999999999999999999999999999999999992
Q ss_pred CccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 433 HNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 433 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
...++|||+|+|.|+|++||++|++++++.|+++| +++++++ +.+ ..+.++++...++|++++|+
T Consensus 353 -~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~--~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 353 -QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE-----PEY--KRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp -CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-----CEE--CSCSSBCCEEECEEEC----
T ss_pred -CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC-----Ccc--ccCCcccCcceeEEEecCCC
Confidence 24689999999999999999999999999999999 8999754 122 33556777789999999884
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=1.3e-52 Score=405.88 Aligned_cols=326 Identities=17% Similarity=0.214 Sum_probs=258.6
Q ss_pred HHHHHHHhhcCCceEEecC-CE---eEEEcCCHHHHHHHHHhcccccCCCCc------hhhhhh--hccCCcccccCCCC
Q 048184 69 VSLQSLSQKYGPLMQLKFG-LE---TVVVGSSAEVAELLLKTYDVTFASRPP------LLAWKH--ANYNYLVMPGAPYG 136 (512)
Q Consensus 69 ~~~~~~~~kyG~v~~~~~~-~~---~~vvi~d~~~~~~i~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~g 136 (512)
..+.+|+++ ||||+++++ |. ++++|+|++.+++++..+ ..|..++. ...... ....+.++++. +|
T Consensus 17 ~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g 93 (398)
T 1lfk_A 17 DPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDY-DP 93 (398)
T ss_dssp EECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGC-CT
T ss_pred ChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCcccc-CC
Confidence 344557777 999999875 55 799999999999999333 35666653 111111 11123455554 59
Q ss_pred hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHH-HHHHHHHHHHhccccCcc
Q 048184 137 PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFM-FNLAIMSRMLFGKRYTEE 215 (512)
Q Consensus 137 ~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fG~~~~~~ 215 (512)
+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+.. .++++|+.+++.. ++.++++. +||.+++..
T Consensus 94 ~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~ 163 (398)
T 1lfk_A 94 PEHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER--------AGSPADLIAFVADKVPGAVLCE-LVGVPRDDR 163 (398)
T ss_dssp THHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH--------HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH
T ss_pred HHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh--------cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH
Confidence 9999999999 79999999999999999999999999974 2457999999887 88999987 699886421
Q ss_pred cccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 048184 216 DENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTND 295 (512)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d 295 (512)
..+......++.. + ...++..++.+.+.+++.++|+++++.. ..|
T Consensus 164 --------~~~~~~~~~~~~~----------~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~d 208 (398)
T 1lfk_A 164 --------DMFMKLCHGHLDA----------S--------LSQKRRAALGDKFSRYLLAMIARERKEP---------GEG 208 (398)
T ss_dssp --------HHHHHHHHHTTCT----------T--------SCHHHHHHHHHHHHHHHHHHHHHHHHSC---------CSS
T ss_pred --------HHHHHHHHHHHhc----------c--------cchHHHHHHHHHHHHHHHHHHHHHHhCC---------CCC
Confidence 3444444332210 0 1125667788889999999999887643 358
Q ss_pred HHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCC
Q 048184 296 IVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVN 355 (512)
Q Consensus 296 ~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~ 355 (512)
+++.|+++. + ..++++++..++ +|++||++|+|+++|++
T Consensus 209 ll~~ll~~~-~----~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------- 267 (398)
T 1lfk_A 209 MIGAVVAEY-G----DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------------- 267 (398)
T ss_dssp HHHHHHHHH-G----GGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH----------------
T ss_pred HHHHHHHhc-C----CCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence 999999765 1 167888877655 89999999999999975
Q ss_pred ChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 356 LPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 356 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
|++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||. .
T Consensus 268 --~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~ 335 (398)
T 1lfk_A 268 --SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------I 335 (398)
T ss_dssp --HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------C
T ss_pred --HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------C
Confidence 7999999999999999966679999999999999999999999999999999999999999999983 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCC
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGD 475 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 475 (512)
.++|||+|+|.|+|++||++|++++++.|+++| +++++.+
T Consensus 336 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 376 (398)
T 1lfk_A 336 PHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADP 376 (398)
T ss_dssp CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESST
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCC
Confidence 589999999999999999999999999999999 8999743
No 68
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=1.4e-52 Score=405.13 Aligned_cols=353 Identities=17% Similarity=0.200 Sum_probs=273.2
Q ss_pred ccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccC-C-CCch--hhhh--h-hccCCcccccC
Q 048184 62 LIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFA-S-RPPL--LAWK--H-ANYNYLVMPGA 133 (512)
Q Consensus 62 ~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~-~-~~~~--~~~~--~-~~~~~~~~~~~ 133 (512)
.+..+++..+.+| ++|||||++++ +++++++++|++++++++.++ .|. + ++.. .... . ....+.++++.
T Consensus 13 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (396)
T 1n40_A 13 ARGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI 89 (396)
T ss_dssp CCSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH
T ss_pred ccccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH
Confidence 3557899999999 99999999997 788999999999999999864 355 4 3321 1110 0 00012333333
Q ss_pred CCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhcccc
Q 048184 134 PYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRY 212 (512)
Q Consensus 134 ~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~ 212 (512)
.|+++|+.+ .+.|++. ++.+.+.+.++++++++.+... ++++|+..++ ..+++++++. +||.++
T Consensus 90 ----~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~--------~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 154 (396)
T 1n40_A 90 ----ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITE--------GAPADLRNDFADPLATALHCK-VLGIPQ 154 (396)
T ss_dssp ----HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHH--------CSCEETTTTTHHHHHHHHHHH-HHTCCG
T ss_pred ----HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhc--------CCCccHHHHHHHHhHHHHHHH-HhCCCh
Confidence 999999999 7999999 9999999999999999999742 3579998655 5899999998 899886
Q ss_pred CcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 048184 213 TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHG 292 (512)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 292 (512)
+.. ..+....+.+..... ..| .++..++.+.+ +++.++++ +. ..
T Consensus 155 ~~~--------~~~~~~~~~~~~~~~------~~p----------~~~~~~~~~~~-~~~~~~i~----~~-------~~ 198 (396)
T 1n40_A 155 EDG--------PKLFRSLSIAFMSSA------DPI----------PAAKINWDRDI-EYMAGILE----NP-------NI 198 (396)
T ss_dssp GGH--------HHHHHTHHHHTBCCS------SCC----------HHHHHHHHHHH-HHHHHHHH----CT-------TC
T ss_pred hhH--------HHHHHHHHHHhcccc------CCC----------HHHHHHHHHHH-HHHHHHHh----CC-------CC
Confidence 421 445555555443211 011 13555666777 77777776 11 12
Q ss_pred cccHHHHHhcccCC-ccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCcccccc
Q 048184 293 TNDIVDVLLQLADD-PTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEK 351 (512)
Q Consensus 293 ~~d~l~~ll~~~~~-~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 351 (512)
..|+++.|+++..+ + +..++++++..++ +|++||++|+|+++|++
T Consensus 199 ~~dll~~ll~~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------ 264 (396)
T 1n40_A 199 TTGLMGELSRLRKDPA--YSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------ 264 (396)
T ss_dssp CSHHHHHHHHHHTSGG--GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------
T ss_pred CCCHHHHHHHhhcccc--cCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------
Confidence 46899999987522 2 3368888887655 89999999999999853
Q ss_pred CCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcc
Q 048184 352 DIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVV 431 (512)
Q Consensus 352 ~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~ 431 (512)
|++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.+
T Consensus 265 ------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------ 332 (396)
T 1n40_A 265 ------LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP------ 332 (396)
T ss_dssp ------GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST------
T ss_pred ------HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC------
Confidence 79999999999999999666799999999999999999999999999999999999999999999963
Q ss_pred cCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184 432 GHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP 501 (512)
Q Consensus 432 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 501 (512)
..++|||+|+|.|+|++||++|++++++.|+++| +++++++. .++.+ ..+.+.+...+++|++
T Consensus 333 ---~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~--~~~~~~~~~~~lpv~~ 396 (396)
T 1n40_A 333 ---TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPI--DQLVW--RTRFQRRIPERLPVLW 396 (396)
T ss_dssp ---TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGCCB--CCSBSBCCBSCCEEEC
T ss_pred ---CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCc--ccccc--ccccccCCcceeeeeC
Confidence 3689999999999999999999999999999999 59997542 12222 3345556666777763
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=7.6e-51 Score=396.04 Aligned_cols=358 Identities=17% Similarity=0.227 Sum_probs=276.8
Q ss_pred CCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccCCCCch--hhh-h------hhccCCcccccC
Q 048184 64 GQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFASRPPL--LAW-K------HANYNYLVMPGA 133 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~--~~~-~------~~~~~~~~~~~~ 133 (512)
..+++.++.+++++ |||+++.. ++.++++|++++++++++++. ..|+.++.. ... . .....+.++ +.
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 113 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNF-IA 113 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCG-GG
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcc-cc
Confidence 46789999999876 99999986 566799999999999999865 456655421 000 0 011122334 44
Q ss_pred CCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhcccc
Q 048184 134 PYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRY 212 (512)
Q Consensus 134 ~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~ 212 (512)
.+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+. .++++|+...+ ..++.++++. +||.+.
T Consensus 114 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~---------~~~~~dl~~~~~~~~~~~vi~~-l~G~~~ 182 (426)
T 3rwl_A 114 MDRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLP---------VGEEFDWVDRVSIEITTQMLAT-LFDFPF 182 (426)
T ss_dssp CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSC---------SSSCEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred cCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhh---------cCCCcchHHHHHHHHHHHHHHH-HcCCCH
Confidence 4599999999999 7999999999999999999999998873 45689987776 6788888776 899764
Q ss_pred CcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 048184 213 TEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHG 292 (512)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 292 (512)
... ..+....+.+..... +. .....+...+..+++.+++.+++++++.. ..
T Consensus 183 ~~~--------~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~ 233 (426)
T 3rwl_A 183 EER--------RKLTRWSDVTTAAPG--------GG-----VVESWDQRKTELLECAAYFQVLWNERVNK--------DP 233 (426)
T ss_dssp GGT--------HHHHHHHHHHTCCTT--------SS-----SCSSHHHHHHHHHHHHHHHHHHHHHHHTS--------CC
T ss_pred HHH--------HHHHHHHHHHHhccC--------cc-----ccccHHHHHHHHHHHHHHHHHHHHHHhhc--------CC
Confidence 322 334444333222111 00 01123456667788999999999888422 33
Q ss_pred cccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccC
Q 048184 293 TNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKD 352 (512)
Q Consensus 293 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 352 (512)
..|+++.|+++..++ .++++++..++ +|+.||++|+++++|+
T Consensus 234 ~~dll~~ll~~~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~-------------- 295 (426)
T 3rwl_A 234 GNDLISMLAHSPATR----NMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP-------------- 295 (426)
T ss_dssp CSSHHHHHHHCGGGG----GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------------
T ss_pred CCCHHHHHHhcccCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh--------------
Confidence 579999999875433 57888887665 9999999999999984
Q ss_pred CCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCccc
Q 048184 353 IVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVG 432 (512)
Q Consensus 353 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~ 432 (512)
+|+++||+|+||++|+++. .+|++.+|++++|+.||||+.|+++.+++||||++|+||++|||+||..
T Consensus 296 ----~~l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~------- 363 (426)
T 3rwl_A 296 ----ALVETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP------- 363 (426)
T ss_dssp ----GGHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT-------
T ss_pred ----HhHHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC-------
Confidence 3899999999999999998 4599999999999999999999999999999999999999999999943
Q ss_pred CccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 433 HNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 433 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
..++|||+|+|.|+|++||++|++++++.|+++| +++++++. .+ ..+...+....++|+++|
T Consensus 364 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~--~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 364 --RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP-----ER--VRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp --TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC-----EE--CCCSSBCCEEECEEEEEC
T ss_pred --CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC-----cc--cccccccCcceeeEEEeC
Confidence 4789999999999999999999999999999999 99997542 11 123334555578888765
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=6.4e-50 Score=385.99 Aligned_cols=353 Identities=18% Similarity=0.208 Sum_probs=269.5
Q ss_pred CCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHHHH
Q 048184 65 QNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRK 144 (512)
Q Consensus 65 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 144 (512)
.+++.++.+++++ |||+++..| .+++++++++++++++. .|+.++...........+.++ +..+|+.|+++|+
T Consensus 20 ~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTA-LGSDPPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSG-GGCCTTHHHHHHH
T ss_pred cCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchhccccc-ccCCchHHHHHHH
Confidence 5788899888664 899987654 58999999999999743 454432111111111112334 4456999999999
Q ss_pred HHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHHHHHHHHHHHHhccccCcccccCCCChh
Q 048184 145 IYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFMFNLAIMSRMLFGKRYTEEDENNIVTPK 224 (512)
Q Consensus 145 ~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~ 224 (512)
.+ .+.|++..++.+.+.+.+.++++++.+. .++++|+...+..+++++++..+||.+.+.. .
T Consensus 93 ~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~---------~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~--------~ 154 (394)
T 2wiy_A 93 QT-NKWFTPKLVDGWVRTTRELVGDLLDGVE---------AGQVIEARRDLAVVPTHVTMARVLQLPEDDA--------D 154 (394)
T ss_dssp HH-HTTCSHHHHHHHTHHHHHHHHHHHHTCC---------TTCCEEHHHHHTHHHHHHHHHHHHTCCCCCH--------H
T ss_pred HH-HhccCHHHHHHHHHHHHHHHHHHHHHHh---------ccCCeeHHHHHHhhhHHHHHHHHcCCCHhHH--------H
Confidence 98 7999999999999999999999988764 3457999999999999999999999875321 4
Q ss_pred HHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhccc
Q 048184 225 QFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLA 304 (512)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~ 304 (512)
.+...+....... ...|.. ...++..++.+.+.+++.++|++++.+. ..|+++.|++..
T Consensus 155 ~~~~~~~~~~~~~------~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~~---------~~dll~~Ll~~~ 213 (394)
T 2wiy_A 155 AVMEAMFEAMLMQ------SAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVNP---------GDGLADSLLDAA 213 (394)
T ss_dssp HHHHHHHHHHGGG------SSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHSC---------CSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhc------cCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcCC---------CCcHHHHHHHhh
Confidence 4444332222110 011211 1224555677888899999999887543 358999999765
Q ss_pred CCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHH
Q 048184 305 DDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVK 364 (512)
Q Consensus 305 ~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~ 364 (512)
.++ .++++++..++ +|++||++|+++++|+ +|+++||+
T Consensus 214 ~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~ 271 (394)
T 2wiy_A 214 RAG----EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE------------------SARAAIIN 271 (394)
T ss_dssp HTT----SSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHH
T ss_pred hcC----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHH
Confidence 432 58888887655 8999999999999976 37899999
Q ss_pred hhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCC
Q 048184 365 EVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGR 444 (512)
Q Consensus 365 EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~ 444 (512)
|+||++|+++.. +|++.+|++++|+.||||+.|+++.+++||||++|+||++|||+||++. ..++|||+|+
T Consensus 272 E~LRl~pp~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~ 342 (394)
T 2wiy_A 272 EMVRMDPPQLSF-LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGP 342 (394)
T ss_dssp HHHHHSCSBCEE-EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGG
T ss_pred HHHhhCCCccCe-eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCC
Confidence 999999999864 5999999999999999999999999999999999999999999999742 3689999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccccCcccccCCCceeee
Q 048184 445 RMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEERFGGRTSRKNPLLVVP 501 (512)
Q Consensus 445 r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 501 (512)
|.|+|++||++|++++++.|+++|+ ++++++. .+. .+...+....++|++
T Consensus 343 r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~-----~~~--~~~~~~g~~~lpv~~ 393 (394)
T 2wiy_A 343 HSCAGQIISRAEATTVFAVLAERYERIELAEEP-----TVA--HNDFARRYRKLPIVL 393 (394)
T ss_dssp GSCTTHHHHHHHHHHHHHHHHHHCSCEEESSCC-----EEC--CCSSBCCEEECEEEE
T ss_pred CcCCcHHHHHHHHHHHHHHHHHhCCCceECCCC-----ccc--ccccccCcceeeEEe
Confidence 9999999999999999999999998 9997531 221 223344445666664
No 71
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=5e-50 Score=389.63 Aligned_cols=365 Identities=14% Similarity=0.145 Sum_probs=274.8
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhh-ccC-----
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHA-NYN----- 126 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~----- 126 (512)
.+|.+++.. ..+++.+ ++.++||||+++.+++.. ++|+++++++++++++. +............ ..+
T Consensus 23 ~lp~~~~~~--~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~ 95 (416)
T 3p3o_A 23 DLPFLDFTD--PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDF 95 (416)
T ss_dssp TCCBCCTTS--TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHH
T ss_pred CCCCCCccc--ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhh
Confidence 355555332 4678877 455789999999876555 89999999999998653 3322111000000 000
Q ss_pred CcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHH-HHHHHHHHHHH
Q 048184 127 YLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKER-LFMFNLAIMSR 205 (512)
Q Consensus 127 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~-~~~~~~~~~~~ 205 (512)
..+.++..+|+.|+++||.+ .+.|++..++.+.+.+.+.++++++.+ . .+ .+|+... ...+++++++.
T Consensus 96 ~~~~l~~~dg~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~--------~g-~~d~~~~~~~~~~~~vi~~ 164 (416)
T 3p3o_A 96 MVDFLQSLDGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-P--------QG-DFDFVQHFPHPLPALVMCQ 164 (416)
T ss_dssp HHHSGGGCCHHHHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C--------SS-SEEHHHHTTTHHHHHHHHH
T ss_pred hcCccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c--------cC-CccHHHHHHHHHHHHHHHH
Confidence 01234455699999999999 799999999999999999999999988 2 22 3896554 45699999998
Q ss_pred HHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 048184 206 MLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKR 285 (512)
Q Consensus 206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 285 (512)
+||.+.+.. +.+......+..... .. .+....++..++.+.+.+++.++|++++++.
T Consensus 165 -l~G~~~~~~--------~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-- 221 (416)
T 3p3o_A 165 -LLGFPLEDY--------DTVGRLSIETNLGLA---------LS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP-- 221 (416)
T ss_dssp -HHTCCGGGH--------HHHHHHHHTTCGGGT---------TC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--
T ss_pred -HhCCCHHHH--------HHHHHHHHHHHhhcc---------cc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 589765321 333333332222111 00 1122346777888999999999999988653
Q ss_pred ccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCC
Q 048184 286 KLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRN 345 (512)
Q Consensus 286 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~ 345 (512)
..|+++.|+++..++ .++++++..++ +|++||++|+++++|++
T Consensus 222 -------~~dll~~ll~~~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------ 284 (416)
T 3p3o_A 222 -------GDDLTSDIVRAFHDG----VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------ 284 (416)
T ss_dssp -------CSSHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------
T ss_pred -------CccHHHHHHHhhccC----CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------
Confidence 468999999876543 68888887665 99999999999999864
Q ss_pred ccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCC
Q 048184 346 KWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVG 425 (512)
Q Consensus 346 ~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~ 425 (512)
|+++||+|+||++|+++...+|++.+|++++|+.||||+.|+++.+++||||++|+||++|||+||..
T Consensus 285 ------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~ 352 (416)
T 3p3o_A 285 ------------LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE 352 (416)
T ss_dssp ------------GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS
T ss_pred ------------HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC
Confidence 89999999999999997777799999999999999999999999999999999999999999999732
Q ss_pred CCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 426 KEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 426 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
..++|||+|+|.|+|++||++|++++++.|+++| +++++.+. .+. .+...+....++|+++|
T Consensus 353 ---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-----~~~--~~~~~~g~~~lpv~~~p 415 (416)
T 3p3o_A 353 ---------APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI-----TWR--HELGVAGPDALPLRFGA 415 (416)
T ss_dssp ---------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC-----EEC--CCTTCCCEEECEEEESC
T ss_pred ---------CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC-----cee--cCCCccCcceeeEEEec
Confidence 3689999999999999999999999999999999 58887542 222 22333444577787754
No 72
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=1.6e-49 Score=380.13 Aligned_cols=336 Identities=17% Similarity=0.258 Sum_probs=257.6
Q ss_pred ccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc--hhhhh-h--hc--cC---CcccccCCCC
Q 048184 67 LHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP--LLAWK-H--AN--YN---YLVMPGAPYG 136 (512)
Q Consensus 67 ~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~--~~~~~-~--~~--~~---~~~~~~~~~g 136 (512)
++..+.++ ++||||+++ + +.+++++++++++++.+. ..|++++. ..... . .. .+ +.++++. +|
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTS-DP 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccC-CC
Confidence 45677777 589999987 4 479999999999999864 46887764 10011 0 01 11 1345444 59
Q ss_pred hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCcc
Q 048184 137 PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEE 215 (512)
Q Consensus 137 ~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~ 215 (512)
+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+ . .+ ++|+..++ ..+++++++.+ ||.+++..
T Consensus 74 ~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~--------~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~ 141 (368)
T 1io7_A 74 PLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-D--------PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK 141 (368)
T ss_dssp THHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-C--------TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH
T ss_pred hHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-h--------cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH
Confidence 9999999999 799999999999999999999999988 3 22 69999876 78999999999 99876421
Q ss_pred cccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 048184 216 DENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTND 295 (512)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d 295 (512)
+.+......+.. .. ..|. . .++..+..+.+.+++.+++ +. ..|
T Consensus 142 --------~~~~~~~~~~~~---~~----~~p~-------~-~~~~~~~~~~~~~~~~~~i-----~~---------~~d 184 (368)
T 1io7_A 142 --------EKFKEWSDLVAF---RL----GKPG-------E-IFELGKKYLELIGYVKDHL-----NS---------GTE 184 (368)
T ss_dssp --------HHHHHHGGGCTT---SC----CCTT-------C-HHHHHHHHHHHHHHHHHHT-----TS---------SCH
T ss_pred --------HHHHHHHHHHHh---cc----CChH-------H-HHHHHHHHHHHHHHHHHHh-----CC---------CCC
Confidence 333332221111 00 0121 1 2455566677777777776 11 358
Q ss_pred HHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCC
Q 048184 296 IVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVN 355 (512)
Q Consensus 296 ~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~ 355 (512)
+++.|++. .++++++..++ +|++|| +|+|+++| +
T Consensus 185 ~l~~ll~~--------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~---------------- 238 (368)
T 1io7_A 185 VVSRVVNS--------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N---------------- 238 (368)
T ss_dssp HHHHHHTS--------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T----------------
T ss_pred HHHHHHhc--------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c----------------
Confidence 99999875 35666665544 899999 99999998 2
Q ss_pred ChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 356 LPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 356 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
|++|||+|+||++|+++ ..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||+ + .
T Consensus 239 --~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------~ 305 (368)
T 1io7_A 239 --LYLKAIEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN--P--------N 305 (368)
T ss_dssp --CHHHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC--S--------C
T ss_pred --hHHHHHHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC--C--------C
Confidence 79999999999999999 456999999999999999999999999999999999999999999994 1 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCCCCCCCCcccccCcccccCCCceeeeccCC
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGFE-WKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKPRL 505 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 505 (512)
.++|||+|+|.|+|++||++|++++++.|+++|+ +++++ . .+ ..+.+.+....++|++++|.
T Consensus 306 ~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~-----~~--~~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 306 PHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD-T-----EK--VPNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE-E-----EE--CCCSSBCCEEEEEEEEEC--
T ss_pred CCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC-c-----ee--ccCCcccCCceeEEEeccCC
Confidence 5899999999999999999999999999999996 99864 1 12 12344566668999999983
No 73
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=1.6e-49 Score=379.43 Aligned_cols=334 Identities=16% Similarity=0.181 Sum_probs=259.6
Q ss_pred ccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCc-hh-hh-----hhhccC---CcccccCCCC
Q 048184 67 LHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPP-LL-AW-----KHANYN---YLVMPGAPYG 136 (512)
Q Consensus 67 ~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~-~~-~~-----~~~~~~---~~~~~~~~~g 136 (512)
++..+.++ ++|||||++. | .+++++++++++++.+. ..|.+++. .. .. .....+ ..++++. +|
T Consensus 1 p~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg 73 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DP 73 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cc
Confidence 35667777 5799999987 3 79999999999999865 46777642 11 11 101112 1455555 59
Q ss_pred hhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCcc
Q 048184 137 PHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEE 215 (512)
Q Consensus 137 ~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~ 215 (512)
+.|+++|+.+ .+.|++..++. +.+.+.++++++.+. +.+|+...+ ..+++++++. +||.+ + +
T Consensus 74 ~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~-----------g~~d~~~~~~~~~~~~vi~~-~~G~~-~-~ 136 (367)
T 3b4x_A 74 PLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD-----------EEFDVIESFAIPLPILVISK-MLGIN-P-D 136 (367)
T ss_dssp THHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC-----------SEEEHHHHTTTHHHHHHHHH-HHTCC-C-C
T ss_pred hhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc-----------CCcchHHHHHHhhHHHHHHH-HcCCC-C-c
Confidence 9999999999 79999999988 999999999988763 249999765 8999999999 79988 3 2
Q ss_pred cccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 048184 216 DENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTND 295 (512)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d 295 (512)
. ..+....+.+...... .|... +.. ++.+.+.+++.+++++++++. ..|
T Consensus 137 ~-------~~~~~~~~~~~~~~~~------~p~~~--------~~~-~~~~~~~~~~~~~i~~r~~~~---------~~d 185 (367)
T 3b4x_A 137 V-------KKVKDWSDLVALRLGR------ADEIF--------SIG-RKYLELISFSKKELDSRKGKE---------IVD 185 (367)
T ss_dssp H-------HHHHHHHHHHHTTTTS------TTGGG--------CCC-HHHHHHHHHHHHHHHHHTTTC---------CSS
T ss_pred H-------HHHHHHHHHHHhccCC------ChhhH--------HHH-HHHHHHHHHHHHHHHHHhcCC---------CCC
Confidence 2 5566666655543211 23210 112 566778888999988876432 468
Q ss_pred HHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCC
Q 048184 296 IVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVN 355 (512)
Q Consensus 296 ~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~ 355 (512)
+++.|+++ .++++++..++ +|+. |++|+++++|++
T Consensus 186 ll~~ll~~--------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~---------------- 240 (367)
T 3b4x_A 186 LTGKIANS--------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA---------------- 240 (367)
T ss_dssp HHHHHHTS--------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS----------------
T ss_pred HHHHHHhc--------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc----------------
Confidence 99999976 35666666544 8899 999999999953
Q ss_pred ChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 048184 356 LPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNF 435 (512)
Q Consensus 356 lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~ 435 (512)
+|||+|+||++|+++ ..+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||. .
T Consensus 241 ----~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~ 305 (367)
T 3b4x_A 241 ----LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------N 305 (367)
T ss_dssp ----HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------C
T ss_pred ----hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------C
Confidence 899999999999999 5669999999999999999999999999999999999999999999983 3
Q ss_pred ceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 436 ELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 436 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
.++|||+|+|.|+|++||++|++++++.|+++| +++++++ ++. .+.+.+....++|++++
T Consensus 306 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~------~~~--~~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 306 PHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK------EKI--DNEVLNGYRKLVVRVER 366 (367)
T ss_dssp CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE------EEC--CCSSBCSEEEEEEEEEE
T ss_pred CCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc------ccc--ccccccCcceEEEEecC
Confidence 689999999999999999999999999999999 7999642 221 13444555688888754
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.8e-49 Score=373.75 Aligned_cols=300 Identities=19% Similarity=0.207 Sum_probs=238.0
Q ss_pred hhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHHHHHHHhhcCChhH
Q 048184 76 QKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKS 155 (512)
Q Consensus 76 ~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~ 155 (512)
++||||+++ | +++|+|++.+++++.++ ..|.+++...... . ++.++++. +|+.|+++|+.+ .+.|++..
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~--~-~~~~l~~~-~g~~~~~~R~~~-~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN--A-GGISFITM-DNPEHKEFRDIS-APYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGC-CHHHHHHHHHHH-HHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC--c-cccccccC-CchHHHHHHHHh-hhhcCHHH
Confidence 689999986 3 89999999999999865 4687775211111 1 23455554 599999999999 79999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHH-HHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHH
Q 048184 156 LAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERL-FMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELF 234 (512)
Q Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (512)
++.+.+.+.++++++++.+. ++|+.+++ ..+++++++.+ ||.+.+.. +.+......+.
T Consensus 71 l~~~~~~i~~~~~~l~~~l~------------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--------~~~~~~~~~~~ 129 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID------------NKDIISEYAVRLPVNIISKI-LGIPDSDM--------PLFKLWSDYII 129 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT------------TSCHHHHTTTHHHHHHHHHH-HTCCGGGH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc------------ccCHHHHHhhhhhHHHHHHH-cCCCHHHH--------HHHHHHHHHHh
Confidence 99999999999999987652 68998865 89999999998 99876421 45555555544
Q ss_pred hccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHhcccCCcccccccc
Q 048184 235 LLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLE 314 (512)
Q Consensus 235 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~ 314 (512)
... .|++. ..++. +..+.+.+++.+++ ..| ++.|+++..+ +..++
T Consensus 130 ~~~--------~p~~~------~~~~~-~~~~~~~~~~~~~i----------------~~d-l~~ll~~~~~---~~~l~ 174 (343)
T 2rfb_A 130 GNK--------RDENF------NYVNN-RMVSRLLEIFKSDS----------------HGI-INVLAGSSLK---NRKLT 174 (343)
T ss_dssp TSC--------CSSHH------HHHHH-HHHHHHHHHHHSCC----------------SSH-HHHHHTCBCS---SSBCC
T ss_pred hcc--------Ccchh------hHHHH-HHHHHHHHHHHHHH----------------hcc-HHHHHhhhcC---CCCCC
Confidence 321 13221 11233 45555555555443 246 8888876433 23688
Q ss_pred HHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHHHHHhhhhcCCCc-
Q 048184 315 RDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQAIVKEVMRLHPPL- 373 (512)
Q Consensus 315 ~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~- 373 (512)
++++..++ +|++||++|+|+++|+ +|||+|+||++|++
T Consensus 175 ~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~ 233 (343)
T 2rfb_A 175 MDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQ 233 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCcccc
Confidence 88887655 8999999999999985 89999999999999
Q ss_pred cccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccCCCCCCCcchHHH
Q 048184 374 TLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFGSGRRMCVGYALG 453 (512)
Q Consensus 374 ~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A 453 (512)
+ ..+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||| ..++|||.|+|.|+|++||
T Consensus 234 ~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA 301 (343)
T 2rfb_A 234 F-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLA 301 (343)
T ss_dssp C-BCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHH
T ss_pred c-ccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHH
Confidence 8 567999999999999999999999999999999999999999999995 2589999999999999999
Q ss_pred HHHHHHHHHHHHhhce-eecCCC
Q 048184 454 LKIVQSTLANLLHGFE-WKLPGD 475 (512)
Q Consensus 454 ~~e~~~~l~~ll~~f~-~~~~~~ 475 (512)
+.|++++++.|+++|+ ++++++
T Consensus 302 ~~e~~~~la~ll~~f~~~~~~~~ 324 (343)
T 2rfb_A 302 RLEASIALNDILNHFKRIKIDYK 324 (343)
T ss_dssp HHHHHHHHHHHHHHCSCCCBCTT
T ss_pred HHHHHHHHHHHHHhCCCceeCCC
Confidence 9999999999999996 999864
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=1.4e-47 Score=371.32 Aligned_cols=366 Identities=15% Similarity=0.174 Sum_probs=258.3
Q ss_pred CCCceeee---ccccCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhh---hhhhcc
Q 048184 52 KPWHLIVN---LNLIGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLA---WKHANY 125 (512)
Q Consensus 52 ~~~p~lG~---~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~ 125 (512)
.++|.+|- ...+..||+.++.++++ +|||+++ .+..+++|++++++++++++. ..|+....... ......
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccc
Confidence 45888872 22345789999988854 6999876 444678999999999999754 34543322111 111112
Q ss_pred CCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeH-HHHHHHHHHHHHH
Q 048184 126 NYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHL-KERLFMFNLAIMS 204 (512)
Q Consensus 126 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl-~~~~~~~~~~~~~ 204 (512)
...+.++..+|+.|+++|+.+ ++.|+++.++.+++.+.+.++++++.+... ++.+|+ .++...+..++++
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~--------~~~~D~v~~~~~~~~~~~i~ 164 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLAR--------GGNIDAIADLAEAYPLSVFP 164 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHT--------TSEEETCCCCCCHHHHHHHH
T ss_pred cCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhcc--------CCCceeHHHHHhhhhHhHHH
Confidence 223445555699999999999 799999999999999999999999998753 446665 4556667777777
Q ss_pred HHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048184 205 RMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGK 284 (512)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 284 (512)
.+ +|.+.... ..+......+....... ....+........+. ..+.++.+..
T Consensus 165 ~l-~g~~~~~~--------~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~~- 216 (412)
T 4dnj_A 165 DA-MGLKQEGR--------ENLLPYAGLVFNAFGPP--------------NELRQSAIERSAPHQ----AYVAEQCQRP- 216 (412)
T ss_dssp HH-HTCCSTTG--------GGHHHHHHHHHHHTSCS--------------SHHHHHHHHTCHHHH----HHHHHHTSGG-
T ss_pred HH-cCCchhhh--------hhhhhhhhccccccccc--------------HHHHHHHHHHHHHHH----HHHHHHHHhh-
Confidence 65 45443222 33333333333322110 000111111122222 2222222222
Q ss_pred cccccCCCcccHHHHHhcccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcC
Q 048184 285 RKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGR 344 (512)
Q Consensus 285 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~ 344 (512)
.... +.+..++....+. ..++++++..++ +|++||++|+||++|.
T Consensus 217 -----~~~~-~~~~~l~~~~~~~---~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~------ 281 (412)
T 4dnj_A 217 -----NLAP-GGFGACIHAFSDT---GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP------ 281 (412)
T ss_dssp -----GSCT-TSHHHHHHHTTTT---TSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------
T ss_pred -----cccc-ccchhhhHhhhhc---cchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc------
Confidence 1222 3344444443332 267777777655 9999999999999863
Q ss_pred CccccccCCCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCC
Q 048184 345 NKWVEEKDIVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFV 424 (512)
Q Consensus 345 ~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l 424 (512)
.++.++++|++|++|+++... |.+.+|++|+|+.||||+.|+++.+++||||++|+||++|+||||.
T Consensus 282 ------------~~~~~~~eE~lR~~pp~~~~~-R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~ 348 (412)
T 4dnj_A 282 ------------SLARNAFEEAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT 348 (412)
T ss_dssp ------------GGHHHHHHHHHHHHCSBCEEE-EEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC
T ss_pred ------------cccccccceeeeecCCccccc-ccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC
Confidence 478999999999999999865 9999999999999999999999999999999999999999999973
Q ss_pred CCCCCcccCccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeecc
Q 048184 425 GKEIDVVGHNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPKP 503 (512)
Q Consensus 425 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 503 (512)
..|+|||+|+|.|+|++||++|++++++.|+++| +++++++ +.+ ..+.+++....++|+++|
T Consensus 349 ----------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~-----~~~--~~~~~~rg~~~LpV~~tP 411 (412)
T 4dnj_A 349 ----------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP-----LKR--RFNNTLRGLESLPIQLTP 411 (412)
T ss_dssp ----------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-----CEE--EECSSBEEEEECEEEEEE
T ss_pred ----------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC-----Cee--ecCCCccCCcceeEEEEe
Confidence 3589999999999999999999999999999999 9999743 122 334556666789999876
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=2.3e-43 Score=340.89 Aligned_cols=356 Identities=13% Similarity=0.156 Sum_probs=256.9
Q ss_pred CCCccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchhhhhhhccCCcccccCCCChhHHHH
Q 048184 64 GQNLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLLAWKHANYNYLVMPGAPYGPHWRQT 142 (512)
Q Consensus 64 ~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 142 (512)
..+++..+.++++..+ +++....+| ...+|++++++++++++. ..|+............ ....++...++++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~-~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGE-KAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSC-SSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCccccccccc-ccccCcccCCcHHHHHH
Confidence 4578888888877654 355443343 567899999999999754 4566543322211111 12333445569999999
Q ss_pred HHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHHHHH-HHHHHHHHHHhccccCcccccCCC
Q 048184 143 RKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKERLFM-FNLAIMSRMLFGKRYTEEDENNIV 221 (512)
Q Consensus 143 R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fG~~~~~~~~~~~~ 221 (512)
||.+ ++.|+++.++.+++.+.+.++++++.+. ..+++|+...+.. +...+++ .++|......
T Consensus 113 Rrll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~---------~~g~~D~v~~~a~~l~~~vi~-~llg~~~~d~------ 175 (417)
T 4dxy_A 113 RKAL-DKGLNLAKIRKVEDKVREVASSLIDSFA---------ARGECDFAAEYAELFPVHVFM-ALADLPLEDI------ 175 (417)
T ss_dssp HHHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHH---------TTSEEEHHHHTTTTHHHHHHH-HHTTCCGGGH------
T ss_pred HHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhh---------hcCCeeeHHHHHhhhHHHHHH-HHcCCCHHHH------
Confidence 9999 7999999999999999999999999987 3456887665544 4454444 4577664321
Q ss_pred ChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCcccHHHHHh
Q 048184 222 TPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYEHVLHEHERHGKRKLFKEHGTNDIVDVLL 301 (512)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll 301 (512)
..+......+...... .+........++.+.+..++.++++++++.. ..|+++.|+
T Consensus 176 --~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~---------~ddl~s~L~ 231 (417)
T 4dxy_A 176 --PVLSEYARQMTRPEGN-------------TPEEMATDLEAGNNGFYAYVDPIIRARVGGD---------GDDLITLMV 231 (417)
T ss_dssp --HHHHHHHHHHHSCCCS-------------SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---------CCSHHHHHH
T ss_pred --HHHHhhhhhhcccccc-------------ChHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------ccchhhhhc
Confidence 4455554444332111 0122235666777888899999988876443 568999999
Q ss_pred cccCCccccccccHHHHHHHH--------------------HHhcCHHHHHHHHHHHHHHhcCCccccccCCCCChhHHH
Q 048184 302 QLADDPTLEVKLERDHIKASM--------------------QLLKNPEVIQKATDELDRVIGRNKWVEEKDIVNLPYIQA 361 (512)
Q Consensus 302 ~~~~~~~~~~~l~~~~i~~~~--------------------~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a 361 (512)
.+..++ ..++++++..++ +|++||++++++++|...+ ..
T Consensus 232 ~~~~~~---~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~ 290 (417)
T 4dxy_A 232 NSEING---ERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MR 290 (417)
T ss_dssp TCEETT---EECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HH
T ss_pred cccccC---CccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------cc
Confidence 876543 368888887655 9999999999999986542 22
Q ss_pred HHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCcccCccceeccC
Q 048184 362 IVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVGHNFELLPFG 441 (512)
Q Consensus 362 ~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg 441 (512)
++.|.+| +++.... +|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+|+ +..|+|||
T Consensus 291 avee~~~-~~~~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG 358 (417)
T 4dxy_A 291 GAEEMFR-RFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SISHSTFG 358 (417)
T ss_dssp THHHHHH-HSCCBEE-EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTC
T ss_pred ceeeeec-ccccccc-ccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCCCCCcC
Confidence 3334444 4444443 4999999999999999999999999999999999999999999993 24689999
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCCCCCCCCCcccccCcccccCCCceeeec
Q 048184 442 SGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGDMKKEDLDMEERFGGRTSRKNPLLVVPK 502 (512)
Q Consensus 442 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 502 (512)
+|+|.|+|++||++|++++++.||++| +++++++. .++. .+.+++....++|++.
T Consensus 359 ~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~----~~~~--~~~~~~g~~~LPv~~~ 414 (417)
T 4dxy_A 359 GGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGE----TPIY--HSGIVAAVENVPLVWP 414 (417)
T ss_dssp CGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTC----CCEE--ECSSBCEEECCEEECC
T ss_pred CCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCC----Ceee--cCCcccCceeeeEEee
Confidence 999999999999999999999999999 99998663 2222 2233344447777763
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.8e-42 Score=322.19 Aligned_cols=310 Identities=15% Similarity=0.117 Sum_probs=202.6
Q ss_pred CCC-CCCCceeeeccc-----cCCCccHHHHHHHhhcCCceEEecCCEeEEEcCCHHHHHHHHHhcccccCCCCchh--h
Q 048184 48 PPG-PKPWHLIVNLNL-----IGQNLHVSLQSLSQKYGPLMQLKFGLETVVVGSSAEVAELLLKTYDVTFASRPPLL--A 119 (512)
Q Consensus 48 ppg-P~~~p~lG~~~~-----~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~d~~~~~~i~~~~~~~~~~~~~~~--~ 119 (512)
||| ++++|++|+... +..+++.++.+++++ ||+++. .+.+++++++++++++.+. .|.+++... .
T Consensus 36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~~ 108 (381)
T 2yjn_B 36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPEW 108 (381)
T ss_dssp HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCHH
T ss_pred CCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccccc
Confidence 677 446799997644 456899999999876 999865 2479999999999999863 576653211 0
Q ss_pred h-----hhhccCCcccccCCCChhHHHHHHHHHhhcCChhHHHHhHHHHHHHHHHHHHHHHhhccCCCCCCCCceeHHHH
Q 048184 120 W-----KHANYNYLVMPGAPYGPHWRQTRKIYMTQLLSPKSLAQFEYIRIEERKALLFKLYKSSTSSSSSSSTPVHLKER 194 (512)
Q Consensus 120 ~-----~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~ 194 (512)
. ..... +.++++. +|+.| .+.|+ . ++.+++.++++++.+. +.+|+...
T Consensus 109 ~~~~~~~~~~~-~~~l~~~-dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~-----------g~~Dl~~~ 161 (381)
T 2yjn_B 109 MRAAGAPPAEW-AQPFRDV-HAASW--------EGEVP-----D-VGELAESFAGLLPGAG-----------ARLDLVGD 161 (381)
T ss_dssp HHHHTCCHHHH-THHHHHH-HHCCC--------CSCCC-----C-CSCHHHHTSTTSCC-----------------CCCC
T ss_pred ccccccccchh-hhhhhhC-Cchhh--------hhccC-----C-hHHHHHHHHHHHHhcc-----------CcchHHHH
Confidence 0 00011 2344444 48888 46777 3 6788888888887764 25888755
Q ss_pred H-HHHHHHHHHHHHhccccCcccccCCCChhHHHHHHHHHHhccCCCCccccccccccccccchHHHHHHHHHHHHHHHH
Q 048184 195 L-FMFNLAIMSRMLFGKRYTEEDENNIVTPKQFTEIVDELFLLPGVLDIGDAIPWLAFLDLQGNIKRMKAVKKKIDKFYE 273 (512)
Q Consensus 195 ~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~ 273 (512)
+ ..+++++++.+ ||.+.+.. ...+.+..... .+ +.+.. .++.. +.+.
T Consensus 162 ~a~~l~~~vi~~l-~G~~~~~~------------~~~~~~~~~~~-------~~----~~~~~-~~~~~-------~~~~ 209 (381)
T 2yjn_B 162 FAWQVPVQGMTAV-LGAAGVLR------------GAAWDARVSLD-------AQ----LSPQQ-LAVTE-------AAVA 209 (381)
T ss_dssp CCTHHHHHHHHTC------CCH------------HHHHHHTTHHH-------HT----TSCCC-HHHHH-------HHHH
T ss_pred HHHHHHHHHHHHH-cCCCHHHH------------HHHHHHHHhcc-------CC----CCHHH-HHHHH-------HHHH
Confidence 4 69999999995 99876321 12222211100 00 00111 11111 1111
Q ss_pred HHHHHHHHhcccccccCCCcccHHHHHhcccCCccccccccHHHHHHHH-HHhcCHHHHHHHHHHHHHHhcCCccccccC
Q 048184 274 HVLHEHERHGKRKLFKEHGTNDIVDVLLQLADDPTLEVKLERDHIKASM-QLLKNPEVIQKATDELDRVIGRNKWVEEKD 352 (512)
Q Consensus 274 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~-~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 352 (512)
.. . ...++..++... +.+...+...+ +|+.||++++++++|++
T Consensus 210 --------~l-------~-~~~~~~ll~aG~-------eTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------- 253 (381)
T 2yjn_B 210 --------AL-------P-ADPALRALFAGA-------EMTANTVVDAVLAVSAEPGLAERIADDPA------------- 253 (381)
T ss_dssp --------HC-------C---CHHHHHHHHH-------HHHHHHHHHHHHHHHHCHHHHHHHHHCCC-------------
T ss_pred --------HH-------H-HHHHHHHHHHhh-------hHHHHHHHHHHHHHHHCHHHHHHHhhCHH-------------
Confidence 11 0 022333333321 22333333333 99999999999999853
Q ss_pred CCCChhHHHHHHhhhhcCCCccccCCccccccceecCcccCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCccc
Q 048184 353 IVNLPYIQAIVKEVMRLHPPLTLLAPHKARENCKVAGSNILKNSRVIVNVWAIGRDPTLWEKPNEFCPERFVGKEIDVVG 432 (512)
Q Consensus 353 l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~ 432 (512)
|+++||+|+||++|+++.. +|.+.+|++++|+.||||+.|+++.+++|+||++|+||++|||+||++
T Consensus 254 -----~l~~~i~E~LR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~------- 320 (381)
T 2yjn_B 254 -----AAQRTVAEVLRLHPALHLE-RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA------- 320 (381)
T ss_dssp -------HHHHHHHHHHSCSCSEE-EEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC-------
T ss_pred -----HHHHHhCeeeeecCCCcce-eEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC-------
Confidence 8999999999999999974 599999999999999999999999999999999999999999999964
Q ss_pred CccceeccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeecCCC
Q 048184 433 HNFELLPFGSGRRMCVGYALGLKIVQSTLANLLHGF-EWKLPGD 475 (512)
Q Consensus 433 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 475 (512)
..++|||+| |.|+|++||++|++++++.|+++| +++++.+
T Consensus 321 --~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~ 361 (381)
T 2yjn_B 321 --DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP 361 (381)
T ss_dssp --CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred --CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence 468999999 999999999999999999999999 9999765
No 78
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=70.13 E-value=21 Score=23.97 Aligned_cols=50 Identities=16% Similarity=0.176 Sum_probs=36.8
Q ss_pred eeeeccccCCC----ccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHH
Q 048184 56 LIVNLNLIGQN----LHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 56 ~lG~~~~~~~~----~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~ 105 (512)
++||++.-..+ ....+.+...+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 56776543222 347788889999999888764 456778899999888876
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=68.78 E-value=16 Score=26.32 Aligned_cols=56 Identities=14% Similarity=0.103 Sum_probs=40.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHHhccccc
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
--++|++..- -....+.++..+||+|..+.+. |--+|...+++.+..++..++..+
T Consensus 13 ~lfV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~ 76 (103)
T 1s79_A 13 SVYIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKY 76 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCC
T ss_pred EEEEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEE
Confidence 3467777542 3456788899999999887753 456788899999999887444333
No 80
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.65 E-value=6.2 Score=27.99 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=42.7
Q ss_pred CceeeeccccC--CCccHHHHHHHhhcC-CceEEecCCEeEEEcCCHHHHHHHHHh-cccccCCCC
Q 048184 54 WHLIVNLNLIG--QNLHVSLQSLSQKYG-PLMQLKFGLETVVVGSSAEVAELLLKT-YDVTFASRP 115 (512)
Q Consensus 54 ~p~lG~~~~~~--~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~d~~~~~~i~~~-~~~~~~~~~ 115 (512)
+-+++|+..-. ......+.++..+|| +|..+ .+|.-+|...+.+.++..+.. ++..+-.|+
T Consensus 11 ~lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 11 LLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 34588886642 222345778999995 99888 578999999999999888753 344444444
No 81
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=65.59 E-value=31 Score=25.11 Aligned_cols=56 Identities=23% Similarity=0.215 Sum_probs=41.3
Q ss_pred CCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEec------CCEeEEEcCCHHHHHHHHH
Q 048184 48 PPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF------GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 48 ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~------~~~~~vvi~d~~~~~~i~~ 105 (512)
||.|..--++||+..- -....+.++..+||+|..+.+ -|.-+|-..+++.+...+.
T Consensus 4 ~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 4 PPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 5555556788887653 234678889999999988875 2356788889988888876
No 82
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=59.67 E-value=30 Score=22.62 Aligned_cols=54 Identities=9% Similarity=0.048 Sum_probs=36.5
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhccccc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
++||+.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++.++..+...+
T Consensus 3 ~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~ 65 (75)
T 2mss_A 3 FVGGLSV--NTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEI 65 (75)
T ss_dssp EEECCCS--SCCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCS
T ss_pred EEecCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEE
Confidence 3555543 22346788889999999888753 345677889999988876443333
No 83
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=59.12 E-value=18 Score=23.79 Aligned_cols=51 Identities=6% Similarity=0.069 Sum_probs=35.4
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhcc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYD 108 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~ 108 (512)
++||+.. .-....+.++..+||+|..+.+. |.-+|-..+++.++.++..+.
T Consensus 3 ~v~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 3 FVGGLSP--DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp EESCCCS--SCCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 3455443 22346788888999999888762 345677889999988887543
No 84
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=58.18 E-value=30 Score=23.84 Aligned_cols=53 Identities=15% Similarity=0.038 Sum_probs=37.7
Q ss_pred CCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC----CEeEEEcCCHHHHHHH
Q 048184 49 PGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG----LETVVVGSSAEVAELL 103 (512)
Q Consensus 49 pgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----~~~~vvi~d~~~~~~i 103 (512)
+-|...-++|++..- -..+.+++...+||+|..+.+. |--+|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~~--~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTED--MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 333445677887653 3446788999999999998864 5677888999998854
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=56.43 E-value=53 Score=23.94 Aligned_cols=59 Identities=14% Similarity=0.019 Sum_probs=41.5
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--CEeEEEcCCHHHHHHHHH-hcccccCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--LETVVVGSSAEVAELLLK-TYDVTFASR 114 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--~~~~vvi~d~~~~~~i~~-~~~~~~~~~ 114 (512)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+. -+...+..+
T Consensus 18 ~l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr 79 (115)
T 3beg_B 18 RVVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 79 (115)
T ss_dssp CEEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCT
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 3467887643 2345788889999999888763 667788899999988876 333444433
No 86
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=53.04 E-value=59 Score=23.13 Aligned_cols=59 Identities=14% Similarity=0.114 Sum_probs=41.8
Q ss_pred CceeeeccccCCC----ccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHHh-cccccC
Q 048184 54 WHLIVNLNLIGQN----LHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLKT-YDVTFA 112 (512)
Q Consensus 54 ~p~lG~~~~~~~~----~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~~-~~~~~~ 112 (512)
--++||+..-..+ ....+.++..+||+|..+.+. |.-+|-..+++.+...+.. ++..+.
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~ 87 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLD 87 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECS
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccC
Confidence 4578888754222 457788999999999988864 4567778888888888764 333333
No 87
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=47.05 E-value=75 Score=22.65 Aligned_cols=51 Identities=12% Similarity=-0.012 Sum_probs=38.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+.. .-..+.+.++..+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 17 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 347787764 33457888899999999887753 6778888999999888863
No 88
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.99 E-value=65 Score=23.22 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=39.3
Q ss_pred CCCceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 52 KPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 52 ~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
..--++||+..- -....++++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 16 ~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 16 SRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 335677887652 3446788999999999888753 567888899998888876
No 89
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=45.34 E-value=75 Score=22.11 Aligned_cols=50 Identities=22% Similarity=0.215 Sum_probs=35.5
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec---CCEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---~~~~~vvi~d~~~~~~i~~ 105 (512)
+-++||+..- --...++++..+||+|..+++ -|--+|-..+++.+....+
T Consensus 9 wL~VgNL~~~--~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 9 WLLLKNLTAQ--IDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp EEEEECCCTT--CCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred eEEEeCCCcc--CCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 5567887653 234789999999999988774 3556677778866666654
No 90
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=44.21 E-value=55 Score=23.81 Aligned_cols=50 Identities=20% Similarity=0.106 Sum_probs=37.0
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+..- -..+.+.++..+||+|..+.+. |--+|-..+++.++..+..
T Consensus 8 lfV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 467777653 2356888899999999877652 2357888999999888753
No 91
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=43.82 E-value=83 Score=22.20 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=36.3
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 26 l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 467777652 2446788899999999887752 3456777899998888763
No 92
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=43.15 E-value=36 Score=23.11 Aligned_cols=52 Identities=13% Similarity=0.093 Sum_probs=37.3
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhc
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTY 107 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~ 107 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++...
T Consensus 13 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 13 KMFVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 4577887653 2456788899999999877652 23567778889888888654
No 93
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=42.98 E-value=68 Score=23.12 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=40.9
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEec---CCEeEEEcCCHHHHHHHHHh-cccccCCCC
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---GLETVVVGSSAEVAELLLKT-YDVTFASRP 115 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---~~~~~vvi~d~~~~~~i~~~-~~~~~~~~~ 115 (512)
-++||+.. .-....+.++..+||+|..+.+ .+.-+|-..+.+.++..+.. ++..+..++
T Consensus 13 l~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 13 ILAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 45676654 3345678899999999988886 34567888899988888753 444454444
No 94
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=42.43 E-value=85 Score=22.36 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=37.2
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
-++|++.. .-....+.++..+||+|..+.+. |.-+|-..+.+.+...+.
T Consensus 29 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 29 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 46777765 23446788899999999888763 456788899999988876
No 95
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.69 E-value=68 Score=21.45 Aligned_cols=50 Identities=22% Similarity=0.059 Sum_probs=35.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -..+.+.++..+||+|..+.+. |--+|-..+++.+..++.
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 4567776542 2346788888999999887642 345677889998888875
No 96
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=41.69 E-value=64 Score=22.69 Aligned_cols=50 Identities=22% Similarity=0.050 Sum_probs=35.7
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC-----C----EeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-----L----ETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-----~----~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+..- -..+.+.++..+||+|..+.+. | --+|-..+++.+...+..
T Consensus 22 lfV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 467777653 2346788899999999877652 1 246777899998888753
No 97
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.28 E-value=95 Score=21.88 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=41.2
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC----------CEeEEEcCCHHHHHHHHHh--cccccCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG----------LETVVVGSSAEVAELLLKT--YDVTFASR 114 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----------~~~~vvi~d~~~~~~i~~~--~~~~~~~~ 114 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++.. +...+..+
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g~ 87 (107)
T 2cph_A 17 KILVRNIPFQ--ANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGR 87 (107)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSC
T ss_pred EEEEeCCCCc--CCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECCC
Confidence 4577877653 2446788899999999888863 3456778899999888764 34444433
No 98
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=39.21 E-value=78 Score=22.28 Aligned_cols=51 Identities=14% Similarity=0.034 Sum_probs=38.3
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -....+.++..+||+|..+.+ -+.-+|-..+++.+...+..
T Consensus 13 ~l~V~nl~~~--~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANT--VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 4577877652 244678889999999988875 45567788999999888863
No 99
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=39.20 E-value=85 Score=21.88 Aligned_cols=58 Identities=17% Similarity=0.048 Sum_probs=39.2
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEec----CCEeEEEcCCHHHHHHHHHh-cccccCCCC
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF----GLETVVVGSSAEVAELLLKT-YDVTFASRP 115 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~----~~~~~vvi~d~~~~~~i~~~-~~~~~~~~~ 115 (512)
++||+.. .-..+.+.++..+||+|..+.+ -|.-+|-..+++.+..++.. +...+..+.
T Consensus 4 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 66 (101)
T 2hvz_A 4 YVGNLGT--GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSR 66 (101)
T ss_dssp EEECCCS--SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSCC
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCcE
Confidence 4566544 2245678889999999877765 35667888999999888763 333444433
No 100
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=38.70 E-value=94 Score=21.38 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=36.4
Q ss_pred CceeeeccccC--CCccHHHHHHHhhcCCceEEecC------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIG--QNLHVSLQSLSQKYGPLMQLKFG------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..-. .+....+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 45778776431 11222344889999999888764 5577888999998888763
No 101
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.64 E-value=96 Score=21.46 Aligned_cols=50 Identities=24% Similarity=0.214 Sum_probs=37.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 10 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 68 (99)
T 1whw_A 10 RLFVRNLSYT--SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA 68 (99)
T ss_dssp EEEEECCCTT--CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 3467776542 2446788899999999888763 346788899999988884
No 102
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.64 E-value=93 Score=21.28 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=38.8
Q ss_pred CCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 49 PGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 49 pgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
|.|...-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++..
T Consensus 12 ~~~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 12 PDPNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CCGGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 333345577877653 2346788899999999877752 2346777899999888763
No 103
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=38.59 E-value=81 Score=23.21 Aligned_cols=60 Identities=10% Similarity=0.134 Sum_probs=41.9
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec---------CCEeEEEcCCHHHHHHHHHh-cccccCCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---------GLETVVVGSSAEVAELLLKT-YDVTFASRP 115 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---------~~~~~vvi~d~~~~~~i~~~-~~~~~~~~~ 115 (512)
.-++||+..- -....+.++..+||+|..+.+ -|.-+|-..+++.+..++.. +...+..+.
T Consensus 24 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 93 (126)
T 3ex7_B 24 ILFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQP 93 (126)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeE
Confidence 3467777642 345678889999999988876 23567888999999988853 444444443
No 104
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=38.29 E-value=58 Score=22.90 Aligned_cols=52 Identities=23% Similarity=0.239 Sum_probs=37.0
Q ss_pred CceeeeccccC----CCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIG----QNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~----~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
.-++||++... .-....+.++..+||+|..+.+. |--+|-..+++.+...+.
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 34667776531 22345778888999999988763 445788889999888875
No 105
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=38.15 E-value=68 Score=22.64 Aligned_cols=50 Identities=18% Similarity=0.010 Sum_probs=36.7
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++.
T Consensus 17 ~l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 17 KLFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 4577877642 2346788899999999887753 345677789999988875
No 106
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.82 E-value=1.2e+02 Score=22.36 Aligned_cols=50 Identities=16% Similarity=0.129 Sum_probs=38.4
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
.-++||+..- -....++++..+||.|..+.+. |.-+|-..+.+.+..++.
T Consensus 33 ~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4678887653 3446788999999999887753 567888889998888875
No 107
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=37.40 E-value=76 Score=21.97 Aligned_cols=51 Identities=24% Similarity=0.158 Sum_probs=36.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC------------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG------------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 7 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3467777542 3456788899999998777653 2456777899999988874
No 108
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.03 E-value=94 Score=21.49 Aligned_cols=50 Identities=16% Similarity=0.082 Sum_probs=35.1
Q ss_pred CceeeeccccCCCccHHHH----HHHhhcCCceEEecC------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQ----SLSQKYGPLMQLKFG------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~----~~~~kyG~v~~~~~~------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....++ ++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 11 ~l~V~nL~~~--~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 11 DVQVSNIDYR--LSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEEEESCCTT--SCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 3467877643 1223444 889999999888763 345677889998888876
No 109
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.73 E-value=1.1e+02 Score=21.75 Aligned_cols=51 Identities=12% Similarity=0.037 Sum_probs=37.9
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec---CCEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---GLETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---~~~~~vvi~d~~~~~~i~~~ 106 (512)
--++|++.. .-....+.++..+||+|..+.+ -|.-+|-..+.+.+..++..
T Consensus 27 ~l~V~nl~~--~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 27 TVYCGGIAS--GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEEECCSS--CCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 346777765 2344678888999999988776 35677888999998888753
No 110
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=36.33 E-value=63 Score=23.75 Aligned_cols=54 Identities=7% Similarity=0.055 Sum_probs=37.3
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhccccc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
++|++..- -....+.++..+||+|..+.+. |.-+|-..+.+.+...+.-++..+
T Consensus 40 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~ 102 (124)
T 2jwn_A 40 YVGNVDYG--STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVF 102 (124)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeE
Confidence 66776542 2356788899999999877652 245677899999988884343333
No 111
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=36.19 E-value=1.3e+02 Score=22.33 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=37.5
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
..-++|++..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++.++.
T Consensus 47 ~~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~ 106 (129)
T 2kxn_B 47 CCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 106 (129)
T ss_dssp SCBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 35577777653 2346788899999999887752 345677899999988886
No 112
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=35.42 E-value=94 Score=24.58 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=36.0
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC-----CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-----LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-----~~~~vvi~d~~~~~~i~~ 105 (512)
-++||+.. .-..+.++++..+||.|-++.+. +.-+|-..|.+.+.....
T Consensus 49 l~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~ 102 (164)
T 1sjr_A 49 IIVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 102 (164)
T ss_dssp EEECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHH
T ss_pred EEEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHH
Confidence 35787753 23446788999999999887762 356788889988887775
No 113
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=35.08 E-value=1.1e+02 Score=22.08 Aligned_cols=50 Identities=20% Similarity=0.118 Sum_probs=37.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+.. .-..+.+.++..+||+|..+.+. |--+|...+.+.++..+.
T Consensus 8 ~lfV~nL~~--~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~ 66 (110)
T 3s8s_A 8 EVTFARLND--NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVK 66 (110)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHH
Confidence 456787764 23456788899999999887652 234788899999988875
No 114
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.08 E-value=50 Score=23.82 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=39.4
Q ss_pred CceeeeccccCCCccHHHH---HHHhhcCCceEEecC------------CEeEEEcCCHHHHHHHHHh-cccccCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQ---SLSQKYGPLMQLKFG------------LETVVVGSSAEVAELLLKT-YDVTFAS 113 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~---~~~~kyG~v~~~~~~------------~~~~vvi~d~~~~~~i~~~-~~~~~~~ 113 (512)
--++||+..- -..+.+. ++..+||+|..+.+. |.-+|-..+++.+...+.. +...+..
T Consensus 17 ~l~V~nLp~~--~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~g 90 (111)
T 2cpi_A 17 LVFVVGLSQR--LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDG 90 (111)
T ss_dssp CEEEEEECTT--TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEECC
Confidence 4577887653 2234566 788999999877653 3556778899999888875 4444443
No 115
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.76 E-value=99 Score=21.64 Aligned_cols=50 Identities=20% Similarity=-0.006 Sum_probs=37.1
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~ 105 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 17 TLYVGNLSRD--VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc--CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 4577877652 2456788899999999877652 355778889999988876
No 116
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=34.62 E-value=77 Score=23.92 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=36.1
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecCC-----EeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGL-----ETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~-----~~~vvi~d~~~~~~i~~ 105 (512)
.-++||+.. .-..+.+.++..+||.|.++.+.. +-+|-..+++.++....
T Consensus 30 ~I~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 30 RIIVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEEEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EEEECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 446888853 234467889999999998877532 36788888888877764
No 117
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=34.51 E-value=98 Score=20.41 Aligned_cols=49 Identities=12% Similarity=0.042 Sum_probs=34.0
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
++||+..- -....+.+...+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 5 ~V~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 5 FVGDLNVN--VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EEECCCTT--CCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 45555432 2346788888999998877642 2356778999999888763
No 118
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.46 E-value=1.2e+02 Score=21.24 Aligned_cols=56 Identities=16% Similarity=-0.068 Sum_probs=39.3
Q ss_pred CCCCCCceeeeccccCCCccHHHHHHHhh-cCCceEEecC--------CEeEEEcCCHHHHHHHHHh
Q 048184 49 PGPKPWHLIVNLNLIGQNLHVSLQSLSQK-YGPLMQLKFG--------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 49 pgP~~~p~lG~~~~~~~~~~~~~~~~~~k-yG~v~~~~~~--------~~~~vvi~d~~~~~~i~~~ 106 (512)
+.|..--++||+..- -....+.++..+ ||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 6 ~~~~~~l~V~nLp~~--~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPD--VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCTT--CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC--CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 344445678887653 234678888888 9999887752 3356777899999888863
No 119
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.38 E-value=1.2e+02 Score=21.40 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=38.7
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
..-++||+.. .-....+..+..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 16 RVLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp SEEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3567888875 33456788999999999887753 567888899998888875
No 120
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=34.04 E-value=84 Score=21.54 Aligned_cols=50 Identities=18% Similarity=0.073 Sum_probs=36.2
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+++.++.++.
T Consensus 18 ~l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 18 TVFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 4567777653 2346788899999999887752 245677788888888876
No 121
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.71 E-value=62 Score=22.62 Aligned_cols=46 Identities=15% Similarity=0.094 Sum_probs=33.6
Q ss_pred CccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhccccc
Q 048184 66 NLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 66 ~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
+....+.+...+||.|..+++ .++-+|...|.+.+..+..-++..+
T Consensus 27 ~l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG~~v 73 (91)
T 2dnr_A 27 ALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKEL 73 (91)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTTCEE
T ss_pred HHHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCCeEe
Confidence 344566777788999988885 5667888889998887776554433
No 122
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=33.54 E-value=1.2e+02 Score=21.13 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=36.6
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec---CCEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---~~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+.. .-....+.++..+||.|..+.+ -|.-+|-..+.+.+...+.
T Consensus 29 ~l~V~nlp~--~~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~ 81 (101)
T 2la4_A 29 TAYIGNIPH--FATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIV 81 (101)
T ss_dssp EEEEESCCT--TCCHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred EEEEcCCCc--ccCHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 346777754 2345678889999999888775 3556777889888888775
No 123
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=33.35 E-value=1.1e+02 Score=21.77 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=37.3
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+..- -....+.++..+||+|..+.+ -|.-+|-..+.+.+...+..
T Consensus 34 l~V~nLp~~--~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 34 LFVRPFPLD--VQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EEECSSCTT--CCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 366766542 234678889999999887775 56678888999999888763
No 124
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.11 E-value=1.1e+02 Score=21.30 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=35.1
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
-++||+.. .-....+.++..+||+|..+.+. |.-+|-..+.+.+..++.
T Consensus 11 l~V~nlp~--~~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 68 (104)
T 1p1t_A 11 VFVGNIPY--EATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68 (104)
T ss_dssp EEEESCCT--TSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHH
T ss_pred EEEeCCCC--cCCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 45676653 22446788889999998777652 345677789999998886
No 125
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.10 E-value=79 Score=22.84 Aligned_cols=55 Identities=16% Similarity=0.080 Sum_probs=38.7
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhccccc
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
-++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..+...+
T Consensus 30 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~~~~ 93 (116)
T 1x4b_A 30 LFIGGLSFE--TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSI 93 (116)
T ss_dssp EEEECCTTC--CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCCcEE
Confidence 367777542 3446788899999998777642 356788899999999887543333
No 126
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=32.86 E-value=1.1e+02 Score=23.93 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=36.6
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
-++||+.. .-....+..+..+||+|..+.+. |.-+|-..+.+.+..++.
T Consensus 75 l~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 132 (165)
T 1rk8_A 75 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 132 (165)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHH
Confidence 57777765 33457788999999999877653 345677789998888876
No 127
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=32.71 E-value=1e+02 Score=22.40 Aligned_cols=59 Identities=15% Similarity=0.050 Sum_probs=40.9
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHHh-cccccCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLKT-YDVTFASR 114 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~~-~~~~~~~~ 114 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+..+
T Consensus 9 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 76 (116)
T 2fy1_A 9 KLFIGGLNRE--TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGK 76 (116)
T ss_dssp EEEEECCTTT--CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 3467777542 3456788899999998777652 4567888999999988863 33444444
No 128
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.23 E-value=71 Score=22.89 Aligned_cols=49 Identities=10% Similarity=0.094 Sum_probs=35.6
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~ 105 (512)
-++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 32 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 32 LHVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp EEEESCCT--TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred EEEECCCC--cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 46677654 23456788899999998777652 456777888888888776
No 129
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.14 E-value=1.3e+02 Score=20.99 Aligned_cols=54 Identities=19% Similarity=-0.050 Sum_probs=38.7
Q ss_pred CCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHH
Q 048184 50 GPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 50 gP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~ 105 (512)
-+..--++||+..- -....+.++..+||+|..+.+. +.-+|-..+.+.+..++.
T Consensus 13 ~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2d9p_A 13 YQVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 73 (103)
T ss_dssp SSCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHH
Confidence 33445678887653 2346788899999999887753 345677799999988876
No 130
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=32.11 E-value=1.1e+02 Score=20.39 Aligned_cols=51 Identities=10% Similarity=-0.037 Sum_probs=36.2
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++|++..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 8 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 8 HVFVGDLSPE--ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3466776542 3456788899999998877652 2346777899999888763
No 131
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.07 E-value=1.2e+02 Score=20.67 Aligned_cols=59 Identities=15% Similarity=0.104 Sum_probs=40.3
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH-hcccccCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK-TYDVTFASR 114 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~-~~~~~~~~~ 114 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++. -+...+..+
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 75 (95)
T 2dnz_A 7 GLYVGSLHFN--ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGR 75 (95)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCc
Confidence 4567777542 3456788899999999887652 245677899999988886 343444433
No 132
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.69 E-value=1.3e+02 Score=20.95 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=37.7
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec-------CCEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-------GLETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-------~~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -....+.++..+||+|..+.+ -+.-+|-..+.+.+..++..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 17 RLHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 4577877642 244678889999999988775 24567788999999888763
No 133
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=31.52 E-value=1.3e+02 Score=21.85 Aligned_cols=51 Identities=14% Similarity=-0.025 Sum_probs=38.3
Q ss_pred CceeeeccccCCCccHHHHHHHhhcC-CceEEecC-----CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYG-PLMQLKFG-----LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~-----~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+.. .-..+.++++..+|| .|..+.+. |.-+|-..+.+.++..+..
T Consensus 30 ~l~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 457788765 334578889999999 78777663 5677888999999888753
No 134
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=31.39 E-value=87 Score=21.08 Aligned_cols=52 Identities=12% Similarity=-0.012 Sum_probs=34.5
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhccc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDV 109 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~ 109 (512)
++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.++.++.-+..
T Consensus 10 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~ 70 (89)
T 3ucg_A 10 YVGNVDYG--ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDES 70 (89)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTC
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCC
Confidence 45655442 2346788889999998877642 2356777888888877744433
No 135
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.03 E-value=1.4e+02 Score=21.16 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=38.4
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
..-++||+.. .-....+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 16 PVVHVRGLCE--SVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp SEEEEESCCS--SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3567888764 23456788999999999888753 567788899998888875
No 136
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.87 E-value=66 Score=21.78 Aligned_cols=47 Identities=15% Similarity=0.117 Sum_probs=34.5
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC----CEeEEEcCCHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG----LETVVVGSSAEVAELL 103 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----~~~~vvi~d~~~~~~i 103 (512)
-++||+..- -....+.++..+||+|..+.+. |--+|-..+.+.++.+
T Consensus 8 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 8 VFVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 456776542 3446788899999999888863 4567888899988754
No 137
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=30.86 E-value=1.1e+02 Score=21.96 Aligned_cols=52 Identities=13% Similarity=0.018 Sum_probs=38.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhc
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTY 107 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~ 107 (512)
--++||+.. .-....+.++..+||+|..+.+. |.-+|-..+.+.+..++...
T Consensus 27 ~lfV~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 27 KMFIGGLSW--QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp CEEEESCCT--TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 447777754 23446788899999999887752 24578889999999988754
No 138
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=30.79 E-value=80 Score=23.62 Aligned_cols=53 Identities=21% Similarity=0.283 Sum_probs=36.4
Q ss_pred Cceeeecccc-C-CCccHHHHHHHhhcCCceEEecC------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLI-G-QNLHVSLQSLSQKYGPLMQLKFG------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~-~-~~~~~~~~~~~~kyG~v~~~~~~------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- . .+....+.++..+||+|..+.+. |.-+|...+.+.+...+..
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 3577887643 1 12223466788999999887752 4567888999988888753
No 139
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.60 E-value=62 Score=23.35 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=35.1
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhcc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYD 108 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~ 108 (512)
++||+..- -....+.++..+||.|..+.+. |.-+|-..+.+.+..++.-+.
T Consensus 29 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 29 FCMQLAAR--IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp EEESCCTT--CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 66776542 2346788899999999888763 235667788888777774343
No 140
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.45 E-value=92 Score=20.17 Aligned_cols=50 Identities=12% Similarity=0.020 Sum_probs=32.8
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTY 107 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~ 107 (512)
++||+..- -..+.+.+...+||+|..+.+. |.-+|-..+++.+...+...
T Consensus 4 ~v~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 4 FIGGLSWQ--TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp EEESCCSS--CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 45665532 2346788889999998766541 24456667888888877643
No 141
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=30.37 E-value=1.3e+02 Score=20.38 Aligned_cols=51 Identities=22% Similarity=0.094 Sum_probs=36.4
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC-------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG-------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~-------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+.. .-....+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 10 ~l~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 10 QIFVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEEECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 346777764 33456788899999998877653 3456777899998888763
No 142
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.24 E-value=1.3e+02 Score=20.44 Aligned_cols=51 Identities=14% Similarity=0.131 Sum_probs=37.6
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
.--++|++.. .-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 17 ~~l~V~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 17 STVYVSNLPF--SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp TSEEEESCCT--TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 3557788764 23456788899999999887762 245788899999888875
No 143
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.01 E-value=1.4e+02 Score=20.73 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=40.1
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecCC---------EeEEEcCCHHHHHHHHHh-cccccCC
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGL---------ETVVVGSSAEVAELLLKT-YDVTFAS 113 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~vvi~d~~~~~~i~~~-~~~~~~~ 113 (512)
.--++|++..- -....+.++..+||+|..+.+.. .-+|-..+++.+..++.. +...+..
T Consensus 13 ~~l~v~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 81 (102)
T 1x5s_A 13 GKLFVGGLSFD--TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 81 (102)
T ss_dssp SEEEEESCCTT--CCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTS
T ss_pred CEEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 34577877642 34467888899999998877532 456778999999888743 3333433
No 144
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.91 E-value=1.3e+02 Score=21.04 Aligned_cols=51 Identities=10% Similarity=0.072 Sum_probs=36.9
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 17 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (103)
T 2cqg_A 17 DLIVLGLPWK--TTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 76 (103)
T ss_dssp CEEEESCCSS--CCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS
T ss_pred EEEEEcCCCc--CCHHHHHHHHHhcCCeEEEEEEecCCCCCccceEEEEECCHHHHHHHHHc
Confidence 4477876542 3456788899999998877652 2356777899999999873
No 145
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.88 E-value=1.5e+02 Score=22.05 Aligned_cols=48 Identities=15% Similarity=-0.050 Sum_probs=34.3
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC---C-EeEEEcCCHHHHHHHHH
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---L-ETVVVGSSAEVAELLLK 105 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~-~~~vvi~d~~~~~~i~~ 105 (512)
++||+.. .-....+.++..+||.|..+.+. | +-+|-..|.+.+.....
T Consensus 29 ~V~NL~~--~vt~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~~~A~~A~~ 80 (124)
T 2e5i_A 29 SIQNPLY--PITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKA 80 (124)
T ss_dssp EEESCCS--CCCHHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSHHHHHHHHH
T ss_pred EEcCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4677653 23346889999999998777642 4 47788889887776664
No 146
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=29.87 E-value=1.2e+02 Score=21.72 Aligned_cols=51 Identities=10% Similarity=-0.043 Sum_probs=37.1
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 17 HVFVGDLSPE--ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4577777542 2446788899999999877652 2456778999999988863
No 147
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.77 E-value=1.3e+02 Score=20.30 Aligned_cols=51 Identities=14% Similarity=0.036 Sum_probs=38.1
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~ 105 (512)
.--++||+..- -....+.++..+||+|..+.+ -+.-+|-..+.+.+...+.
T Consensus 10 ~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~ 61 (90)
T 2dnp_A 10 WKIFVGNVSAA--CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIA 61 (90)
T ss_dssp CCEEEESCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 34577887652 345678888999999988875 3456778899998888876
No 148
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=29.70 E-value=1.3e+02 Score=20.11 Aligned_cols=50 Identities=18% Similarity=0.078 Sum_probs=35.7
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEec----------CCEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF----------GLETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~----------~~~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+..- -....+.++..+||+|..+.+ -|.-+|-..+++.+..++..
T Consensus 7 l~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 7 VHIGRLTRN--VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp EEEECCCTT--CCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 356666542 234678888899999987765 23456788999999988863
No 149
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.68 E-value=1.3e+02 Score=20.29 Aligned_cols=50 Identities=20% Similarity=0.159 Sum_probs=37.7
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~ 105 (512)
--++|++..- -....+.++..+||+|..+.+ -+.-+|-..+++.+...+.
T Consensus 10 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 10 KLFIGNLPRE--ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp EEEEESCCSS--CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 4567777652 344678889999999988775 4667788899999988874
No 150
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.59 E-value=1.5e+02 Score=21.01 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=40.5
Q ss_pred CCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 49 PGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 49 pgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
+.|..--++||+..- .-....+..+..+||.|..+.+. +.-+|-..+.+.+..++.
T Consensus 12 ~~p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 12 VETRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334445678888651 22346788899999999888864 456888899998888875
No 151
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.50 E-value=1.4e+02 Score=21.71 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=38.8
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
..-++||+..- +-....+..+..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 26 ~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 26 RVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 35678887652 12446788999999999888763 567888899998888875
No 152
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=29.38 E-value=1.1e+02 Score=21.92 Aligned_cols=51 Identities=14% Similarity=0.015 Sum_probs=36.6
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+.+.+..++..
T Consensus 27 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 27 NLFIYHLPQE--FGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp CEEEESCCSS--CCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 4577877653 2346788899999998777642 2356778999999888853
No 153
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.33 E-value=1.5e+02 Score=20.94 Aligned_cols=50 Identities=10% Similarity=-0.047 Sum_probs=37.1
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCC-ceEEecC----------CEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGP-LMQLKFG----------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~-v~~~~~~----------~~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+.. .-....+.++..+||+ |..+.+. |.-+|-..+++.+...+..
T Consensus 11 l~V~nLp~--~~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 11 LFIGGIPK--MKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEECCCT--TSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCC--cCCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 46777754 2345678889999998 8887764 3567778999999988864
No 154
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.21 E-value=1.5e+02 Score=20.91 Aligned_cols=40 Identities=30% Similarity=0.342 Sum_probs=32.5
Q ss_pred ccHHHHHHHhhcCCceEEecC----CEeEEEcCCHHHHHHHHHh
Q 048184 67 LHVSLQSLSQKYGPLMQLKFG----LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 67 ~~~~~~~~~~kyG~v~~~~~~----~~~~vvi~d~~~~~~i~~~ 106 (512)
....++++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 357889999999999888763 4567888999999888875
No 155
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=28.68 E-value=1.5e+02 Score=20.52 Aligned_cols=51 Identities=12% Similarity=0.007 Sum_probs=35.7
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceE--------EecC---------CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQ--------LKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~--------~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
..-++||+..- -..+.+.++..+||.|.. +.+. |.-+|-..+.+.++..+.
T Consensus 14 ~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 14 NTIFVQGLGEN--VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp SEEEEECCCSS--CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 34577887653 345678889999999866 4431 245677789999888875
No 156
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.48 E-value=1.5e+02 Score=20.62 Aligned_cols=57 Identities=16% Similarity=-0.013 Sum_probs=39.6
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh-cccccC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT-YDVTFA 112 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~-~~~~~~ 112 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++.. +...+.
T Consensus 15 ~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 81 (103)
T 2dnm_A 15 TLKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELD 81 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBT
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 4567877653 3456788899999999888763 3456778888888888763 433333
No 157
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.86 E-value=92 Score=21.64 Aligned_cols=50 Identities=16% Similarity=0.050 Sum_probs=36.6
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
--++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+.+.+..++.
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~ 69 (99)
T 2cpj_A 17 RLFVGNLPPD--ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKV 69 (99)
T ss_dssp EEEEESCCTT--CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 4577877653 2446788899999998877753 556777788888888774
No 158
>2kt5_A RNA and export factor-binding protein 2; chaperone, mRNA processing, mRNA splicing, transport, nucleus, RNA-binding, spliceosome, transport; NMR {Mus musculus}
Probab=27.62 E-value=1.8e+02 Score=21.23 Aligned_cols=49 Identities=20% Similarity=0.131 Sum_probs=35.7
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~ 105 (512)
-++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 38 l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 94 (124)
T 2kt5_A 38 LLVSNLDFG--VSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMK 94 (124)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTTSCCSEEEEECCSSSSCCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCEeeEEEEEECCHHHHHHHHH
Confidence 466776542 2346788889999998877652 456778899999988876
No 159
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.57 E-value=1.5e+02 Score=20.15 Aligned_cols=50 Identities=18% Similarity=0.151 Sum_probs=37.5
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+||+|..+.+ -+.-+|-..+++.+...+.
T Consensus 12 ~l~V~nLp~~--~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~ 62 (92)
T 2dgt_A 12 KLHVGNISPT--CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIR 62 (92)
T ss_dssp EEEEESCCSS--CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHH
Confidence 4567877642 345678889999999988875 4456777889999888875
No 160
>1ufw_A Synaptojanin 2; RNP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.42 E-value=1.1e+02 Score=21.65 Aligned_cols=48 Identities=15% Similarity=0.215 Sum_probs=34.3
Q ss_pred CCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHhcccccC
Q 048184 65 QNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKTYDVTFA 112 (512)
Q Consensus 65 ~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~~~~~~~ 112 (512)
.+....+.+....||.|..+++ .++-+|...|.+.+..++.-++..+.
T Consensus 35 ~~l~~~L~~~F~~~G~Vilvr~v~d~~fVtF~d~~sAl~AI~ldG~~v~ 83 (95)
T 1ufw_A 35 EDLRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVK 83 (95)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEETTEEEEECSCSHHHHHHHHGGGSEET
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCcEEEEEcChHHHHHHHhcCCeeeC
Confidence 3344556667778999888875 67788888898888877765544443
No 161
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=27.35 E-value=1.8e+02 Score=21.25 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=36.4
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+ . -....+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 41 ~lfVgnl-~---~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 41 TLYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEEECS-S---CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEEcCC-C---CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3477873 2 3457888999999998777653 5677888999998888753
No 162
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=27.20 E-value=1.4e+02 Score=19.75 Aligned_cols=51 Identities=14% Similarity=-0.028 Sum_probs=37.3
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
.--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 8 ~~l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 8 RVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp SEEEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 34577777643 2346788899999999888762 235778889999888874
No 163
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.09 E-value=1.5e+02 Score=20.30 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=37.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+ .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 17 ~l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 4577873 33457788999999999888763 5667788899999888753
No 164
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=27.00 E-value=2.1e+02 Score=23.16 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=36.8
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEec---------CCEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---------GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---------~~~~~vvi~d~~~~~~i~~ 105 (512)
-++||+..- -..+.+.++..+||+|..+.+ .|.-+|-+.+.+.+...+.
T Consensus 31 l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 88 (216)
T 2qfj_A 31 VYVGSIYYE--LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 88 (216)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHH
Confidence 366766542 245678889999999988776 2456788899999999886
No 165
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.96 E-value=1.6e+02 Score=20.32 Aligned_cols=59 Identities=5% Similarity=-0.040 Sum_probs=41.5
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhcccccCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDVTFASR 114 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~~~~~~ 114 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..+...+..+
T Consensus 12 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 79 (99)
T 2dgs_A 12 KIFVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 79 (99)
T ss_dssp EEEEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSC
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCe
Confidence 4567777643 2446788899999999887752 346778899999999887554444443
No 166
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.87 E-value=1.6e+02 Score=21.02 Aligned_cols=52 Identities=15% Similarity=0.042 Sum_probs=38.1
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecCC---------EeEEEcCCHHHHHHHHHhc
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGL---------ETVVVGSSAEVAELLLKTY 107 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~vvi~d~~~~~~i~~~~ 107 (512)
--++||+..- -..+.+.++..+||+|..+.+.. .-+|-..+.+.++.++...
T Consensus 19 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 19 KIFVGGLPYH--TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp EEEEECCCSS--CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 4567777652 24467888999999998877632 4577789999999888643
No 167
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.86 E-value=1.6e+02 Score=20.39 Aligned_cols=53 Identities=15% Similarity=-0.006 Sum_probs=38.5
Q ss_pred CCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 51 PKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 51 P~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
+..--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 11 ~~~~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 72 (102)
T 2cqb_A 11 TKRVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 72 (102)
T ss_dssp CCSCEEEESCCSS--CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 3345678887653 2356788899999999887762 345677789999988875
No 168
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=26.71 E-value=1.7e+02 Score=20.78 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=39.4
Q ss_pred CCCCceeeeccc---cCCCccHHHHHHHhhcCCceEEecC----------CEeEEEcCCHHHHHHHHH-hcccccCCC
Q 048184 51 PKPWHLIVNLNL---IGQNLHVSLQSLSQKYGPLMQLKFG----------LETVVVGSSAEVAELLLK-TYDVTFASR 114 (512)
Q Consensus 51 P~~~p~lG~~~~---~~~~~~~~~~~~~~kyG~v~~~~~~----------~~~~vvi~d~~~~~~i~~-~~~~~~~~~ 114 (512)
|...-++.|+.. +..+....+.+...+||.|..+.+. |.-+|-..+++.+..... -++..|..|
T Consensus 7 ~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp CCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 344567777753 2345567888888999998887642 234566688887777664 344444433
No 169
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.70 E-value=1.3e+02 Score=21.43 Aligned_cols=50 Identities=12% Similarity=-0.044 Sum_probs=36.2
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+||+|..+.+. +.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nlp~~--~~~~~l~~~f~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 74 (114)
T 2do0_A 17 TVFVANLDYK--VGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIS 74 (114)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHH
Confidence 4567777642 3456788899999998877652 245677789999888876
No 170
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=26.54 E-value=1.3e+02 Score=22.51 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=35.8
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
-++|++..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 45 l~V~nLp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 45 LMVNYIPTT--VDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp EEEESCSTT--CCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 467776542 2346788899999999877652 2346777999999988863
No 171
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=26.08 E-value=1.7e+02 Score=20.47 Aligned_cols=51 Identities=20% Similarity=0.095 Sum_probs=36.1
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 31 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4467776542 2346788889999999777653 2356777899999888763
No 172
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.91 E-value=1.6e+02 Score=20.23 Aligned_cols=50 Identities=20% Similarity=0.038 Sum_probs=37.9
Q ss_pred CceeeeccccCCCccHHHHHHHhhc--CCceEEec-CCEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKY--GPLMQLKF-GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~ky--G~v~~~~~-~~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+| |.|..+.+ -+.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~~--~t~~~l~~~F~~~g~g~v~~~~~~~g~afV~f~~~~~A~~A~~ 69 (99)
T 2cpd_A 17 ILYVRNLMLS--TSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMK 69 (99)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCcceEEEEEeCCeEEEEeCCHHHHHHHHH
Confidence 4577877652 3456788899999 88888875 4567788899999988876
No 173
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.83 E-value=1.7e+02 Score=20.23 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=37.2
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++..
T Consensus 19 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 4577777652 2346788899999999887753 3456778999999888753
No 174
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=25.81 E-value=1e+02 Score=25.10 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=36.9
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHHhc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLKTY 107 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~~~ 107 (512)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+.+.+..++...
T Consensus 113 ~V~nLp~--~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 113 YIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp EEECCCT--TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred EecCCCC--cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 5676654 33557889999999998877643 45667779999999888643
No 175
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=25.75 E-value=1.3e+02 Score=23.38 Aligned_cols=49 Identities=20% Similarity=0.219 Sum_probs=35.0
Q ss_pred eeeeccccCCCccHHHHHHHhhcC--CceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYG--PLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG--~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
++||+.. .-....+.++..+|| +|..+.+. |--+|-..+.+.+..++..
T Consensus 59 fVgnLp~--~~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 59 YVGSFSW--WTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp EEECCCT--TCCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 5555543 223567888999999 88877752 2357788999999988875
No 176
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.70 E-value=1.7e+02 Score=20.44 Aligned_cols=59 Identities=17% Similarity=0.087 Sum_probs=41.6
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceE-Eec--------CCEeEEEcCCHHHHHHHHHhcccccCCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQ-LKF--------GLETVVVGSSAEVAELLLKTYDVTFASR 114 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~-~~~--------~~~~~vvi~d~~~~~~i~~~~~~~~~~~ 114 (512)
.-++|++..- -..+.+.++..+||.|.. +.+ -|.-+|-..+++.++..+..+...+..+
T Consensus 17 ~l~V~nLp~~--~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr 84 (104)
T 1wg5_A 17 FVRLRGLPFG--CSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 84 (104)
T ss_dssp EEEEESCCTT--CCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCc
Confidence 4477777653 345678889999998765 543 2456788899999999987655555444
No 177
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=25.46 E-value=99 Score=22.35 Aligned_cols=50 Identities=18% Similarity=0.115 Sum_probs=35.6
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
-++||+..- -..+.++++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 43 l~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 43 LFIYHLPQE--FTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp EEEECSCTT--CCHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 366776542 2456788899999999887753 2456777888888888763
No 178
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.32 E-value=91 Score=21.93 Aligned_cols=57 Identities=14% Similarity=0.079 Sum_probs=39.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhcccccC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDVTFA 112 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~~~~ 112 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+..++..+...+.
T Consensus 18 ~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~ 83 (105)
T 2dh8_A 18 KLFVGGLDWS--TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLD 83 (105)
T ss_dssp EECCBSCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEET
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeEC
Confidence 4567776542 3456788899999998877652 2346777899999888876544343
No 179
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=25.09 E-value=1.7e+02 Score=20.03 Aligned_cols=49 Identities=12% Similarity=0.159 Sum_probs=35.9
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
-++|++.. .-....+.++..+||+|..+.+. |.-+|-..+.+.+..++.
T Consensus 5 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 5 VYLGSIPY--DQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 35666654 22346788899999999888763 346777899999988875
No 180
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=25.04 E-value=1.3e+02 Score=18.62 Aligned_cols=6 Identities=0% Similarity=0.036 Sum_probs=2.2
Q ss_pred ccCCCC
Q 048184 9 TADNPS 14 (512)
Q Consensus 9 ~~~~~~ 14 (512)
|.+...
T Consensus 3 ~~~~~~ 8 (54)
T 2knc_A 3 MGSEER 8 (54)
T ss_dssp TTCTTT
T ss_pred ccccCC
Confidence 333333
No 181
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=25.00 E-value=1.6e+02 Score=22.67 Aligned_cols=56 Identities=9% Similarity=0.118 Sum_probs=38.6
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhcccccC
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYDVTFA 112 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~~~~~ 112 (512)
-++|++.. .-....+.+...+||+|..+.+. |.-+|-..+++.+..++..+...+.
T Consensus 90 l~V~nlp~--~~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~~ 154 (167)
T 2cjk_A 90 IFVGGIGP--DVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFK 154 (167)
T ss_dssp EEEEEECT--TCCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCSEECSS
T ss_pred EEECCCCC--CCCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCCCEEeC
Confidence 35666654 22346788888999999887753 2456778999999988874443333
No 182
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=24.89 E-value=1.5e+02 Score=20.58 Aligned_cols=53 Identities=8% Similarity=-0.032 Sum_probs=35.9
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC----------CEeEEEcCCHHHHHHHHHhccccc
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG----------LETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----------~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
++||+..- -....+.++..+|| |..+.+. |--+|-..+.+.+...+.-++..+
T Consensus 23 ~V~nLp~~--~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~Ai~l~g~~~ 85 (100)
T 2j76_E 23 FLGNLPYD--VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 85 (100)
T ss_dssp EESCCSSC--CSSSHHHHHSCSSC-EEEEECSCCTTTTCCCCSCEEEEECCHHHHHHHHHTTTCCB
T ss_pred EEeCCCCC--CCHHHHHHHHHhcC-CeEEEEEecCCcCCccCeEEEEEECCHHHHHHHHhcCCCEE
Confidence 66776542 23356788889999 9888763 245677889999888884443333
No 183
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=24.61 E-value=1.9e+02 Score=20.49 Aligned_cols=50 Identities=14% Similarity=0.145 Sum_probs=36.4
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
--++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 28 ~l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 28 RLYVGSLHF--NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEEECCCS--SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 346777754 23456788899999999777652 245677899999998875
No 184
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=24.50 E-value=1.9e+02 Score=20.47 Aligned_cols=53 Identities=17% Similarity=0.061 Sum_probs=40.1
Q ss_pred CCCCceeeeccccCCCccHHHHHHHhhcCCceEEec---CCEeEEEcCCHHHHHHHHH
Q 048184 51 PKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF---GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 51 P~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~---~~~~~vvi~d~~~~~~i~~ 105 (512)
|...-++||+..- -....+..+..+||.|..+.+ -|.-+|-..+.+.++..+.
T Consensus 20 ps~~l~V~NLp~~--~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~ 75 (100)
T 3r27_A 20 ASPVVHIRGLIDG--VVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVN 75 (100)
T ss_dssp CCSEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4446788888752 244678899999999987765 4677888899998888875
No 185
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=24.45 E-value=1.5e+02 Score=24.40 Aligned_cols=57 Identities=19% Similarity=0.098 Sum_probs=38.5
Q ss_pred CCCCCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 48 PPGPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 48 ppgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
|..|..--++||+..- -..+.+.++.++||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 11 p~~p~~tlfVgnLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 11 PSYPMASLYVGDLHPD--VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp ----CCEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCCC--CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3344444578887652 2356888899999999887642 2357888999999888754
No 186
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.27 E-value=1.8e+02 Score=20.21 Aligned_cols=58 Identities=9% Similarity=-0.031 Sum_probs=39.0
Q ss_pred CCCCceeeeccccCCCccHHHHHHHhhcCCceEEecC----------CEeEEEcCCHHHHHHHHHhccccc
Q 048184 51 PKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG----------LETVVVGSSAEVAELLLKTYDVTF 111 (512)
Q Consensus 51 P~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~----------~~~~vvi~d~~~~~~i~~~~~~~~ 111 (512)
|..--++||+..- -..+.+.++..+|| |..+.+. |.-+|-..+.+.+..++.-+...+
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 81 (104)
T 1wi8_A 14 PPYTAFLGNLPYD--VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 81 (104)
T ss_dssp SCEEEEEESCCSS--CCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEE
T ss_pred CCCEEEEeCCCCc--CCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCCCEe
Confidence 3334577877543 24467888999999 8888763 235677899999988884443333
No 187
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.97 E-value=1.8e+02 Score=19.97 Aligned_cols=54 Identities=15% Similarity=-0.038 Sum_probs=38.2
Q ss_pred CCCCCceeeeccccCCCccHHHHHHHhhcCCce-EEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 50 GPKPWHLIVNLNLIGQNLHVSLQSLSQKYGPLM-QLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 50 gP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~-~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
.+..--++||+..- -....+.++..+||+|. .+.+. |.-+|-..+++.+...+.
T Consensus 7 ~~~~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 70 (99)
T 2div_A 7 GMAASLWMGDLEPY--MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 70 (99)
T ss_dssp SSSSEEEECSCCTT--CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHH
T ss_pred CCccEEEEeCCCCC--CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHH
Confidence 33334577887653 34467888999999988 77652 235677899999998886
No 188
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.63 E-value=1.3e+02 Score=20.50 Aligned_cols=50 Identities=16% Similarity=0.058 Sum_probs=35.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEE-ec---------CCEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQL-KF---------GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-~~---------~~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+||+|..+ .+ -|.-+|-..+++.+..++.
T Consensus 7 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 66 (96)
T 1x5t_A 7 GIFIGNLDPE--IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 66 (96)
T ss_dssp EEEEECCCTT--CCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 3466776542 2356788899999998655 43 1356788899999999887
No 189
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.34 E-value=1.9e+02 Score=20.09 Aligned_cols=58 Identities=17% Similarity=0.028 Sum_probs=40.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecCC---------EeEEEcCCHHHHHHHHHh-cccccCC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFGL---------ETVVVGSSAEVAELLLKT-YDVTFAS 113 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~---------~~~vvi~d~~~~~~i~~~-~~~~~~~ 113 (512)
--++|++..- -....+.++..+||+|..+.+.. .-+|-..+.+.++.++.. +...+..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 84 (105)
T 1x5u_A 17 TVYVGGLDEK--VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYG 84 (105)
T ss_dssp EEEEECCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHHhCCCeECC
Confidence 4577877653 34567888999999998887632 356788999999998874 3333433
No 190
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=22.87 E-value=1.6e+02 Score=22.46 Aligned_cols=48 Identities=21% Similarity=0.144 Sum_probs=34.8
Q ss_pred eeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHH
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~ 105 (512)
++||+..- -..+.+.++.++||+|..+.+. |.-+|-..+.+.+...+.
T Consensus 4 ~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 4 YVGNLDKA--ITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp EEEEEETT--CCHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred EECCCCCc--CCHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 45666532 2346788899999999887762 346778889999988883
No 191
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=22.58 E-value=1.7e+02 Score=22.38 Aligned_cols=51 Identities=20% Similarity=0.094 Sum_probs=37.7
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
.-++|++.. .-....+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 41 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 100 (156)
T 1h2v_Z 41 TLYVGNLSF--YTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 (156)
T ss_dssp EEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 457787764 23456788999999999888762 2346778999999998874
No 192
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=22.46 E-value=1.9e+02 Score=19.76 Aligned_cols=58 Identities=16% Similarity=0.089 Sum_probs=40.7
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHHh-cccccC
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLKT-YDVTFA 112 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~~-~~~~~~ 112 (512)
--++|++..- .-....+.++..+||+|..+.+ -|.-+|-..+.+.+...+.. +...+.
T Consensus 12 ~l~V~nlp~~-~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~ 71 (96)
T 2kvi_A 12 RLFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNF 71 (96)
T ss_dssp EEEEESSTTS-CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCB
T ss_pred EEEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeC
Confidence 3467877641 1234678889999999988775 46677888999999988864 333333
No 193
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=22.21 E-value=1.5e+02 Score=23.71 Aligned_cols=53 Identities=17% Similarity=0.085 Sum_probs=38.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHhcc
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKTYD 108 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~~~ 108 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..+.
T Consensus 15 ~l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~ 76 (196)
T 1l3k_A 15 KLFIGGLSFE--TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP 76 (196)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCC
Confidence 4577887653 2456788899999998777642 245688899999999987543
No 194
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.95 E-value=2e+02 Score=19.70 Aligned_cols=50 Identities=10% Similarity=0.020 Sum_probs=37.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+.+.+..++.
T Consensus 19 ~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~ 71 (97)
T 1why_A 19 RLWVGGLGPN--TSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACA 71 (97)
T ss_dssp CEEEECCCSS--CCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4577877653 2346788899999999888753 345677789998888876
No 195
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.70 E-value=1.3e+02 Score=21.03 Aligned_cols=50 Identities=16% Similarity=0.096 Sum_probs=36.3
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++.
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 75 (103)
T 2cq0_A 17 TIRVTNLSED--TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 75 (103)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 4577877653 2446788888999999887752 134677899999988886
No 196
>1b7f_A Protein (SXL-lethal protein), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3; splicing regulation, RNP domain, RNA complex; 2.60A {Drosophila melanogaster} SCOP: d.58.7.1 d.58.7.1 PDB: 3sxl_A* 1sxl_A 2sxl_A
Probab=21.69 E-value=2.4e+02 Score=21.60 Aligned_cols=49 Identities=16% Similarity=0.035 Sum_probs=36.4
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
-++|++..- -..+.+.++.++||+|..+.+. |.-+|-..+++.++..+.
T Consensus 6 l~v~nlp~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~a~~ 63 (168)
T 1b7f_A 6 LIVNYLPQD--MTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIK 63 (168)
T ss_dssp EEEECCCTT--CCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEeCCCCccceEEEEEECCHHHHHHHHH
Confidence 356766542 2346788899999999888753 346788899999998885
No 197
>1x5o_A RNA binding motif, single-stranded interacting protein 1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.32 E-value=1.6e+02 Score=20.97 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=35.8
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC--------CEeEEEcCCHHHHHHHHH
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG--------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~--------~~~~vvi~d~~~~~~i~~ 105 (512)
--++|++..- -....+.++..+||+|..+.+. |.-+|-..+.+.+...+.
T Consensus 27 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 84 (114)
T 1x5o_A 27 NLYISNLPLS--MDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 84 (114)
T ss_dssp EEEEESCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcceEEEEEECCHHHHHHHHH
Confidence 3467777642 2346788899999999887752 235677789998888876
No 198
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=21.22 E-value=2.1e+02 Score=26.94 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=38.1
Q ss_pred CCceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 53 PWHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 53 ~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
..-|+||+..- -....|..+..+||+|..+.+. |.-+|.+.+++.+..++..
T Consensus 103 ~~lfV~nL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 103 KTLFVARVNYD--TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 35578887543 2346788889999999887762 3467888899999888754
No 199
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=21.07 E-value=2.1e+02 Score=19.70 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=37.1
Q ss_pred ceeeeccccCCCccHHHHHHHhhcCCceEEec-CCEeEEEcCCHHHHHHHHH
Q 048184 55 HLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKF-GLETVVVGSSAEVAELLLK 105 (512)
Q Consensus 55 p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~-~~~~~vvi~d~~~~~~i~~ 105 (512)
-++||+..- .-....+.++..+||+|..+.+ -|.-+|-..+.+.+..++.
T Consensus 25 l~V~nLp~~-~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~ 75 (97)
T 2xnq_A 25 LFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIE 75 (97)
T ss_dssp EEEESCCSS-CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHH
Confidence 367777630 1234678889999999988876 4667788899999988876
No 200
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.94 E-value=2.2e+02 Score=19.96 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=38.0
Q ss_pred CceeeeccccCCCccHHHHHHHhhcCCceEEecC---------CEeEEEcCCHHHHHHHHHh
Q 048184 54 WHLIVNLNLIGQNLHVSLQSLSQKYGPLMQLKFG---------LETVVVGSSAEVAELLLKT 106 (512)
Q Consensus 54 ~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvi~d~~~~~~i~~~ 106 (512)
--++||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.+..++..
T Consensus 17 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 17 TVFIRNLSFD--SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 4577887653 3446788889999999888764 3456778899999888864
No 201
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=20.60 E-value=1.6e+02 Score=19.89 Aligned_cols=48 Identities=21% Similarity=0.197 Sum_probs=31.6
Q ss_pred eeeeccccCCCccHHHHHHHhhcC--CceEEecC---------CEeEEEcCCHHHHHHHHH
Q 048184 56 LIVNLNLIGQNLHVSLQSLSQKYG--PLMQLKFG---------LETVVVGSSAEVAELLLK 105 (512)
Q Consensus 56 ~lG~~~~~~~~~~~~~~~~~~kyG--~v~~~~~~---------~~~~vvi~d~~~~~~i~~ 105 (512)
++||+.. .-..+.+.++..+|| +|..+.+. |--+|-..+.+.++..+.
T Consensus 5 ~V~nL~~--~~t~~~l~~~F~~~G~~~v~~v~i~~~~~~g~~kG~afV~f~~~~~a~~Ai~ 63 (90)
T 3p5t_L 5 YIGNLTW--WTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 63 (90)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTTCCCCCCEEEEECTTTCCEEEEEEECC-CHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHHhCCCceEEEEEEecCCCCccCcEEEEEECCHHHHHHHHH
Confidence 4566644 223467888899999 87666531 134677788988888874
Done!