BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048189
(252 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 11/225 (4%)
Query: 20 EDIIDILLQIRK----DRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPR 75
DI D L++ + D V L+ + I +++++F AG DT + W++ YL+ NPR
Sbjct: 252 RDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPR 311
Query: 76 AMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID 135
+K+Q+E+ ++IG ++ D L Y++A + ET R VP +P T +
Sbjct: 312 VQRKIQEELDTVIGRSRR-PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLK 370
Query: 136 GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFV--DSCIDFKGQHFELIPFGAGRRI 193
G+ IP VFVN W I D + W NP EF PERF+ D ID K ++I FG G+R
Sbjct: 371 GFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRK 429
Query: 194 CPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITM 238
C G + V L LA LL + ++ +P G+K +D + G+TM
Sbjct: 430 CIGETIARWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGLTM 471
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 42 DHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQ 101
+ I ++ ++F AG DT + W++ YL+ P +K+Q+E+ ++IG + D
Sbjct: 281 EKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERR-PRLSDRP 339
Query: 102 ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWEN 161
+L YL+A + ET R +P +P T ++G+ IP K VFVN W + DPE WE+
Sbjct: 340 QLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWED 399
Query: 162 PEEFYPERFV--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 219
P EF PERF+ D K +++ FG G+R C G + + L LA LL + ++ +
Sbjct: 400 PSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSV 459
Query: 220 PPGMKSQDLDFDVLPGITM 238
PPG+K +D + G+TM
Sbjct: 460 PPGVK---VDLTPIYGLTM 475
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 10/229 (4%)
Query: 1 ELINEHLDPNRTKSELPQPEDIIDILLQIRKDR-----GFKVD---LTLDHIKAVLMNVF 52
+L+N+ L+ + K +++D L+Q + + G D L+ +HI + ++F
Sbjct: 223 DLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIF 282
Query: 53 VAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKE 112
AG +T+ + V W + +L+ NP+ KK+ +EI +G ++ D L L+A ++E
Sbjct: 283 GAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRT-PTISDRNRLLLLEATIRE 341
Query: 113 TMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVD 172
+RL+P P+L+P + I + + T V +N WA+ + + W P++F PERF++
Sbjct: 342 VLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLN 401
Query: 173 -SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 220
+ +PFGAG R C G + + L +A LL +FD E+P
Sbjct: 402 PAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 450
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 43 HIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIG--GNKGFVNEDDV 100
H+ ++++F+ GT+T+A+T+ WA+ +L+ +P +++Q+E+ +G + V D
Sbjct: 279 HVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDR 338
Query: 101 QELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWE 160
L L A + E +RL+P VPL +P T I GY+IP +V N D WE
Sbjct: 339 ARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWE 398
Query: 161 NPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 220
P EF P+RF++ G + + FG G R+C G ++ + + LA LL F P
Sbjct: 399 QPHEFRPDRFLEP-----GANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPP 453
Query: 221 PGMKSQDLDFDVLPGITM 238
P L D G+ +
Sbjct: 454 PVGALPSLQPDPYCGVNL 471
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 53 VAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKE 112
+AGT+T+ + WA+ ++ P +VQ+EI LI G G + DD ++ Y +AV+ E
Sbjct: 283 IAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DLIMGPNGKPSWDDKCKMPYTEAVLHE 341
Query: 113 TMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVD 172
+R VPL + T E V+ GY IP T V N +++ D + W +PE F+PERF+D
Sbjct: 342 VLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLD 401
Query: 173 SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 220
S F + L+PF GRR C G ++ + L LL +F P
Sbjct: 402 SSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 53 VAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKE 112
+AGT+T+ + WA+ ++ P +VQ+EI LI G G + DD ++ Y +AV+ E
Sbjct: 283 IAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DLIMGPNGKPSWDDKCKMPYTEAVLHE 341
Query: 113 TMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVD 172
+R VPL + T E V+ GY IP T V N +++ D + W +PE F+PERF+D
Sbjct: 342 VLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLD 401
Query: 173 SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 220
S F + L+PF GRR C G ++ + L LL +F P
Sbjct: 402 SSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 1 ELINEH---LDPNRTKSELPQPEDIIDILL-QIRKDRGFKVDL-TLDHIKAVLMNVFVAG 55
E + EH LDPN P D+ D LL ++ K++ L T+D I + ++F AG
Sbjct: 227 ERVKEHHQSLDPN-------CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAG 279
Query: 56 TDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR 115
T+T++ T+ + + LMK P +K+ +EI +IG ++ D QE+ Y+ AVV E R
Sbjct: 280 TETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR-IPAIKDRQEMPYMDAVVHEIQR 338
Query: 116 LQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCI 175
VP +P E + GY IP T+V ++ D + + +PE+F PE F++
Sbjct: 339 FITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENG 398
Query: 176 DFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFD 231
FK + PF G+R+C G + + L L +L F+ + P + +D+D
Sbjct: 399 KFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFN--LKPLVDPKDIDLS 451
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 13/248 (5%)
Query: 7 LDPNRTKSELPQPEDIIDILLQIR---KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATV 63
LDPN P D ID L IR +++ + L ++ +N+F AGT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTL 288
Query: 64 VWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 123
+ LMK+P KV +EI +IG N+ ED + + Y +AV+ E R +P+
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYTEAVIHEIQRFGDMLPMG 347
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
+ + + +P T VF ++ RDP + NP +F P+ F+D FK
Sbjct: 348 LAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD-A 406
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNA 243
+PF G+R C G + + L ++ F ++ P K D+ + T+ +
Sbjct: 407 FVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFATIPRNYT 466
Query: 244 LSLLAKYH 251
+S L ++H
Sbjct: 467 MSFLPRHH 474
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 126/243 (51%), Gaps = 13/243 (5%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAA 61
L++E + R + +P+D++ LL+ + D G + H + V + G++T A+
Sbjct: 226 LVDEIIAERRASGQ--KPDDLLTALLEAKDDNGDPIGEQEIHDQVV--AILTPGSETIAS 281
Query: 62 TVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVP 121
T++W + L +P +++ E+ ++ GG V +DV++L + V+ E MRL+P V
Sbjct: 282 TIMWLLQALADHPEHADRIRDEVEAVTGGRP--VAFEDVRKLRHTGNVIVEAMRLRPAVW 339
Query: 122 LLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQH 181
+L R + + + GY IPA + + +AI RDP+++++ EF P+R++
Sbjct: 340 VLT-RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA-ANVPK 397
Query: 182 FELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKK 241
+ + PF AG+R CP + +A + L A L K+ +E G S D V GIT+
Sbjct: 398 YAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAG--SNDA---VRVGITLRPH 452
Query: 242 NAL 244
+ L
Sbjct: 453 DLL 455
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 1 ELINEHLDPNRTKSELPQPEDIIDILL-QIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDT 58
EL+ EH T P D+ + L ++ K +G + ++++ V+ ++F AG T
Sbjct: 231 ELLTEH---RMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVT 287
Query: 59 SAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQP 118
++ T+ W + ++ +P ++VQQEI +IG + D + Y AV+ E R
Sbjct: 288 TSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR-PEMGDQAHMPYTTAVIHEVQRFGD 346
Query: 119 TVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDF- 177
VPL V T + G+ IP T + N ++ +D WE P F+PE F+D+ F
Sbjct: 347 IVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFV 406
Query: 178 KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPG 222
K + F +PF AGRR C G + + L +LL F + +P G
Sbjct: 407 KPEAF--LPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 19 PEDIID-ILLQIRK-----DRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK 72
P D++D +L K G L L+++ A + ++F A DT + + W + +
Sbjct: 249 PRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTR 308
Query: 73 NPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKC 132
P +VQ E+ ++G ++ D L Y+ A + E MR VP+ +P T
Sbjct: 309 YPDVQTRVQAELDQVVGRDR-LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANT 367
Query: 133 VIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDS-CIDFKGQHFELIPFGAGR 191
+ GY IP T+VFVN W++ DP W NPE F P RF+D + K ++ F G+
Sbjct: 368 SVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGK 427
Query: 192 RICPGLNMGIATVDLALANLLYKFDWEMPP 221
R C G + + L ++ L ++ D+ P
Sbjct: 428 RRCIGEELSKMQLFLFISILAHQCDFRANP 457
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 105/179 (58%), Gaps = 6/179 (3%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98
L+ + A + + +A +T+A +++W + L +NP+A +++ QE++S++ N+ +
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQT-PRAE 337
Query: 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDG-YEIPAKTLVFVNAWAIGRDPE 157
D++ + YLKA +KE+MRL P+VP T++K + G Y +P T++ +N +G +
Sbjct: 338 DLRNMPYLKACLKESMRLTPSVPFTT--RTLDKPTVLGEYALPKGTVLTLNTQVLGSSED 395
Query: 158 AWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 216
+E+ +F PER++ + K F +PFG G+R+C G + + LAL ++ K+D
Sbjct: 396 NFEDSHKFRPERWLQK--EKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDI-LLQIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDTS 59
I + ++ +R + P D ID+ LL++ KD+ + ++ ++++F AGT+T+
Sbjct: 225 FIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 60 AATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 119
+ T+ + ++K P ++VQ+EI +IG ++ DD ++ Y AV+ E RL
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDL 343
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
+P VP + GY IP T VF + DP +E P F P F+D+ K
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK- 402
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLD 229
++ +PF G+RIC G + + L +L F P + +D+D
Sbjct: 403 RNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 1 ELINEHLDPNRTKSELPQPEDIIDILL-QIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDT 58
EL+ EH T P D+ + L ++ K +G + ++++ V+ ++F AG T
Sbjct: 231 ELLTEH---RMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVT 287
Query: 59 SAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQP 118
++ T+ W + ++ +P ++VQQEI +IG + D + Y AV+ E R
Sbjct: 288 TSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR-PEMGDQAHMPYTTAVIHEVQRFGD 346
Query: 119 TVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDF- 177
VPL + T + G+ IP T + N ++ +D WE P F+PE F+D+ F
Sbjct: 347 IVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFV 406
Query: 178 KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPG 222
K + F +PF AGRR C G + + L +LL F + +P G
Sbjct: 407 KPEAF--LPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 115/218 (52%), Gaps = 4/218 (1%)
Query: 3 INEHLDPNRTKSELPQPEDIID-ILLQIRKDRGFK-VDLTLDHIKAVLMNVFVAGTDTSA 60
I E + ++ ++ P+D ID L+++ K++ + + T++ ++ +++F AGT+T++
Sbjct: 225 ILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTS 284
Query: 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 120
T+ +A+ L+K+P KVQ+EI +IG N+ +D + Y AVV E R +
Sbjct: 285 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR-SHMPYTDAVVHEVQRYIDLL 343
Query: 121 PLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQ 180
P +P Y IP T + ++ ++ D + + NPE F P F+D +FK
Sbjct: 344 PTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKS 403
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
+ +PF AG+RIC G + + L L ++L F+ +
Sbjct: 404 KY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 440
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 115/218 (52%), Gaps = 4/218 (1%)
Query: 3 INEHLDPNRTKSELPQPEDIID-ILLQIRKDRGFK-VDLTLDHIKAVLMNVFVAGTDTSA 60
I E + ++ ++ P+D ID L+++ K++ + + T++ ++ +++F AGT+T++
Sbjct: 227 ILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTS 286
Query: 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 120
T+ +A+ L+K+P KVQ+EI +IG N+ +D + Y AVV E R +
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR-SHMPYTDAVVHEVQRYIDLL 345
Query: 121 PLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQ 180
P +P Y IP T + ++ ++ D + + NPE F P F+D +FK
Sbjct: 346 PTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKS 405
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
+ +PF AG+RIC G + + L L ++L F+ +
Sbjct: 406 KY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 442
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDI-LLQIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDTS 59
I + ++ +R + P D ID+ LL++ KD+ + ++ ++++F AGT+T+
Sbjct: 225 FIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 60 AATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 119
+ T+ + ++K P ++VQ+EI +IG ++ DD ++ Y AV+ E RL
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDL 343
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
+P VP + GY IP T VF + DP +E P F P F+D+ K
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK- 402
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 220
++ +PF G+RIC G + + L +L F P
Sbjct: 403 RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDI-LLQIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDTS 59
I + ++ +R + P D ID+ LL++ KD+ + ++ ++++F AGT+T+
Sbjct: 225 FIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 60 AATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 119
+ T+ + ++K P ++VQ+EI +IG ++ DD ++ Y AV+ E RL
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDL 343
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
+P VP + GY IP T VF + DP +E P F P F+D+ K
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK- 402
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLD 229
++ +PF G+RIC G + + L +L F P + +D+D
Sbjct: 403 RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDI-LLQIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDTS 59
I + ++ +R + P D ID+ LL++ KD+ + ++ ++++F AGT+T+
Sbjct: 225 FIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETT 284
Query: 60 AATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 119
+ T+ + ++K P ++VQ+EI +IG ++ DD ++ Y AV+ E RL
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDL 343
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
+P VP + GY IP T VF + DP +E P F P F+D+ K
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK- 402
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 220
++ +PF G+RIC G + + L +L F P
Sbjct: 403 RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDI-LLQIRKDRGF-KVDLTLDHIKAVLMNVFVAGTDTS 59
I + ++ +R + P D ID+ LL++ KD+ + ++ ++++F AGT+T+
Sbjct: 225 FIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 60 AATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 119
+ T+ + ++K P ++VQ+EI +IG ++ DD ++ Y AV+ E RL
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDL 343
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
+P VP + GY IP T VF + DP +E P F P F+D+ K
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK- 402
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLD 229
++ +PF G+RIC G + + L +L F P + +D+D
Sbjct: 403 RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 7 LDPNRTKSELPQPEDIIDILLQIR---KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATV 63
LDPN P D ID L IR +++ + L ++ +N+F+ GT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTL 288
Query: 64 VWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 123
+ LMK+P KV +EI +IG N+ ED + + Y++AV+ E R +P+
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDVIPMS 347
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
+ R + + +P T V+ ++ RDP + NP++F P+ F++ FK
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNA 243
+PF G+R C G + + L ++ F + K D+ + T+ +
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
Query: 244 LSLLAKYH 251
+S L ++H
Sbjct: 467 MSFLPRHH 474
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 7 LDPNRTKSELPQPEDIIDILLQIR---KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATV 63
LDPN P D ID L IR +++ + L ++ +N+F AGT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTL 288
Query: 64 VWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 123
+ LMK+P KV +EI +IG N+ ED + + Y++AV+ E R +P+
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDVIPMG 347
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
+ R + + +P T V+ ++ RDP + NP++F P+ F++ FK
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNA 243
+PF G+R C G + + L ++ F + K D+ + T+ +
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
Query: 244 LSLLAKYH 251
+S L ++H
Sbjct: 467 MSFLPRHH 474
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 13/248 (5%)
Query: 7 LDPNRTKSELPQPEDIIDILLQIR---KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATV 63
LDPN P D ID L IR +++ + L ++ + +FV GT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTL 288
Query: 64 VWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 123
+ LMK+P KV +EI +IG N+ ED + + Y++AV+ E R +P+
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDVIPMS 347
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
+ R + + +P T V+ ++ RDP + NP++F P+ F++ FK
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNA 243
+PF G+R C G + + L ++ F + K D+ + T+ +
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
Query: 244 LSLLAKYH 251
+S L ++H
Sbjct: 467 MSFLPRHH 474
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 13/248 (5%)
Query: 7 LDPNRTKSELPQPEDIIDILLQIR---KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATV 63
LDPN P D ID L IR +++ + L ++ + +F+ GT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTL 288
Query: 64 VWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 123
+ LMK+P KV +EI +IG N+ ED + + Y++AV+ E R +P+
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDVIPMS 347
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
+ R + + +P T V+ ++ RDP + NP++F P+ F++ FK
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNA 243
+PF G+R C G + + L ++ F + K D+ + T+ +
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
Query: 244 LSLLAKYH 251
+S L ++H
Sbjct: 467 MSFLPRHH 474
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 13/248 (5%)
Query: 7 LDPNRTKSELPQPEDIIDILLQIR---KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATV 63
LDPN P D ID L IR +++ + L ++ + +F+ GT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTL 288
Query: 64 VWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 123
+ LMK+P KV +EI +IG N+ ED + + Y++AV+ E R +P+
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDVIPMS 347
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
+ R + + +P T V+ ++ RDP + NP++F P+ F++ FK
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-A 406
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNA 243
+PF G+R C G + + L ++ F + K D+ + T+ +
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
Query: 244 LSLLAKYH 251
+S L ++H
Sbjct: 467 MSFLPRHH 474
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 3 INEHLDPNRTKSELPQPEDIIDILL---QIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTS 59
I E + ++ ++ P D ID L + KD K + ++++ + ++FVAGT+T+
Sbjct: 226 IREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQ-KSEFNIENLVGTVADLFVAGTETT 284
Query: 60 AATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 119
+ T+ + + L+K+P KVQ+EI +IG ++ +D + Y AVV E R
Sbjct: 285 STTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR-SHMPYTDAVVHEIQRYSDL 343
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
VP VP Y IP T + ++ D + + NP F P F+D +FK
Sbjct: 344 VPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKK 403
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
+ +PF AG+RIC G + + L L +L F+ +
Sbjct: 404 SDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLK 441
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 3 INEHLDPNRTKSELPQPEDIIDI-LLQIRKDRG-FKVDLTLDHIKAVLMNVFVAGTDTSA 60
I ++ +R + P D+ID LL + K++ + + ++ +++F AGT+T++
Sbjct: 226 IGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTS 285
Query: 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 120
T+ + ++K P ++V +EI +IG ++ D ++ Y +AV+ E R +
Sbjct: 286 TTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP-PELHDRAKMPYTEAVIYEIQRFSDLL 344
Query: 121 PLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQ 180
P+ VP + GY IP T VF+ DP +E P+ F P+ F+D+ K
Sbjct: 345 PMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKT 404
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDL 228
IPF G+RIC G + A + L +L F P + DL
Sbjct: 405 E-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDL 451
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAM 77
P D ID L I+ ++ ++ TL+ + + ++F AGT+T++ T+ +++ L+K+P
Sbjct: 241 NPRDFIDCFL-IKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVA 299
Query: 78 KKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGY 137
+VQ+EI +IG ++ +D + Y AV+ E R +P +P Y
Sbjct: 300 ARVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNY 358
Query: 138 EIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGL 197
IP T + + ++ D +A+ NP+ F P F+D +FK + +PF AG+R+C G
Sbjct: 359 FIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGE 417
Query: 198 NMGIATVDLALANLLYKFDWE 218
+ + L L ++L F +
Sbjct: 418 GLARMELFLFLTSILQNFKLQ 438
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 3 INEHLDPNRTKSELPQPEDIID-ILLQIRKDR-GFKVDLTLDHIKAVLMNVFVAGTDTSA 60
I E + ++ ++ P D ID L+++ K++ + + T++++ ++ AGT+T++
Sbjct: 227 ILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTS 286
Query: 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 120
T+ +A+ L+K+P KVQ+EI ++G N+ +D + Y AVV E R +
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDR-GHMPYTDAVVHEVQRYIDLI 345
Query: 121 PLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQ 180
P +P Y IP T + + ++ D + + NPE F P F+D +FK
Sbjct: 346 PTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKS 405
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
++ +PF AG+RIC G + + L L +L F+ +
Sbjct: 406 NY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 54 AGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKET 113
AG +T+++ + + M L +P +K+Q+EI +++ NK D V ++ YL VV ET
Sbjct: 283 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMVVNET 341
Query: 114 MRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDS 173
+RL P + + + R + I+G IP +V + ++A+ RDP+ W PE+F PERF
Sbjct: 342 LRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 400
Query: 174 CIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
D + PFG+G R C G+ + + LAL +L F ++
Sbjct: 401 NKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 54 AGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKET 113
AG +T+++ + + M L +P +K+Q+EI +++ NK D V ++ YL VV ET
Sbjct: 284 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMVVNET 342
Query: 114 MRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDS 173
+RL P + + + R + I+G IP +V + ++A+ RDP+ W PE+F PERF
Sbjct: 343 LRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 401
Query: 174 CIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
D + PFG+G R C G+ + + LAL +L F ++
Sbjct: 402 NKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 54 AGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKET 113
AG +T+++ + + M L +P +K+Q+EI +++ NK D V ++ YL VV ET
Sbjct: 285 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMVVNET 343
Query: 114 MRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDS 173
+RL P + + + R + I+G IP +V + ++A+ RDP+ W PE+F PERF
Sbjct: 344 LRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 402
Query: 174 CIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
D + PFG+G R C G+ + + LAL +L F ++
Sbjct: 403 NKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 18/221 (8%)
Query: 10 NRTKSELPQPEDI-IDILLQIRK-DRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAM 67
R + L + E++ DIL QI K + G + D + + + F+AG +TSA + + +
Sbjct: 211 QRRREALKRGEEVPADILTQILKAEEGAQDD---EGLLDNFVTFFIAGHETSANHLAFTV 267
Query: 68 TYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQP----TVPLL 123
L + P + ++Q E+ +IG +K +++ +D+ L YL V+KE++RL P T LL
Sbjct: 268 MELSRQPEIVARLQAEVDEVIG-SKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLL 326
Query: 124 VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE 183
E+ +IDG +P T + + + +GR +E+P F P+RF F
Sbjct: 327 E-----EETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA---PKPRFT 378
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMK 224
PF G R C G V + +A LL + ++ + PG +
Sbjct: 379 YFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR 419
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 18 QPEDIIDILLQIRKDRGFK--VDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPR 75
Q ++ ID +LQ D +K LT D + +L+ + +AG TS+ T W +L ++
Sbjct: 225 QSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKT 284
Query: 76 AMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID 135
KK E +++ G N + D +++L+ L +KET+RL+P + +++ R +
Sbjct: 285 LQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MIMMRMARTPQTVA 343
Query: 136 GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICP 195
GY IP V V+ R ++W +F P+R++ G+ F +PFGAGR C
Sbjct: 344 GYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHRCI 402
Query: 196 GLNMGIATVDLALANL--LYKFD 216
G N + + + LY+FD
Sbjct: 403 GENFAYVQIKTIWSTMLRLYEFD 425
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 35 FKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGF 94
K +L+L+ IKA M + DT+A ++ + L +NP VQQ +R
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNP----DVQQILRQESLAAAAS 324
Query: 95 VNED---DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWA 151
++E EL L+A +KET+RL P V L + R V+ Y IPA TLV V ++
Sbjct: 325 ISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYS 383
Query: 152 IGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPG 196
+GR+ + PE + P+R++D I G++F +PFG G R C G
Sbjct: 384 LGRNAALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKV 80
D++D+L+ ++ + G + D I + +++ AG TS+ T W + LM++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 81 QQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIP 140
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 141 AKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMG 200
LV + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 201 IATVDLALANLLYKFDWEM--PP 221
I + + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKV 80
D++D+L+ ++ + G + D I + +++ AG TS+ T W + LM++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 81 QQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIP 140
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 141 AKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMG 200
LV + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 201 IATVDLALANLLYKFDWEM--PP 221
I + + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKV 80
D++D+L+ ++ + G + D I + +++ AG TS+ T W + LM++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 81 QQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIP 140
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 141 AKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMG 200
LV + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 201 IATVDLALANLLYKFDWEM--PP 221
I + + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKV 80
D++D+L+ ++ + G + D I + +++ AG TS+ T W + LM++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 81 QQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIP 140
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 141 AKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMG 200
LV + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 201 IATVDLALANLLYKFDWEM--PP 221
I + + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Query: 13 KSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK 72
+ + P ED + ILL R D L+L +K ++ + AG +T + + L +
Sbjct: 215 QQQPPSEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQ 272
Query: 73 NPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKC 132
+ ++V+QE L + + + ++++ YL V++E +RL P V RE I+ C
Sbjct: 273 HSDIRERVRQEQNKLQLSQE--LTAETLKKMPYLDQVLQEVLRLIPPVGGGF-RELIQDC 329
Query: 133 VIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRR 192
G+ P LV DP+ + +PE+F PERF F +PFG G R
Sbjct: 330 QFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLR 389
Query: 193 ICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPG 235
C G + L L+ +FDW + PG Q+L+ V P
Sbjct: 390 ECLGKEFARLEMKLFATRLIQQFDWTLLPG---QNLELVVTPS 429
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 11/209 (5%)
Query: 11 RTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYL 70
R K+E I+ LL+ K + L+ +KA + + G +T++ T+ W + +
Sbjct: 251 RRKTEFRNYPGILYCLLKSEK-------MLLEDVKANITEMLAGGVNTTSMTLQWHLYEM 303
Query: 71 MKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIE 130
++ + +++E+ + +G +++ +Q + LKA +KET+RL P + + + R
Sbjct: 304 ARSLNVQEMLREEVLNARRQAEGDISKM-LQMVPLLKASIKETLRLHP-ISVTLQRYPES 361
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
V+ Y IPAKTLV V +A+GRDP + +P++F P R++ D HF + FG G
Sbjct: 362 DLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWG 419
Query: 191 RRICPGLNMGIATVDLALANLLYKFDWEM 219
R C G + + L L ++L F EM
Sbjct: 420 VRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98
++ + IKA + + G DT++ T+ W + + +N + ++ E+ + +G +
Sbjct: 268 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDM-AT 326
Query: 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEA 158
+Q + LKA +KET+RL P + + + R + V+ Y IPAKTLV V +A+GR+P
Sbjct: 327 MLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 385
Query: 159 WENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
+ +PE F P R++ D +F + FG G R C G + + + L N+L F E
Sbjct: 386 FFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE 443
Query: 219 M 219
+
Sbjct: 444 I 444
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98
++ + IKA + + G DT++ T+ W + + +N KVQ +R+ + + D
Sbjct: 271 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGD 326
Query: 99 DVQELHY---LKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
L LKA +KET+RL P + + + R + V+ Y IPAKTLV V +A+GR+
Sbjct: 327 MATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGRE 385
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
P + +PE F P R++ D +F + FG G R C G + + + L N+L F
Sbjct: 386 PTFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
Query: 216 DWEM 219
E+
Sbjct: 444 RVEI 447
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 38 DLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97
DLT +++ ++ + +A DT + ++ + + + K+P + + +EI+++IG +
Sbjct: 290 DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD--IKI 347
Query: 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPE 157
DD+Q+L ++ + E+MR QP V LV R+ +E VIDGY + T + +N + R E
Sbjct: 348 DDIQKLKVMENFIYESMRYQPVVD-LVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LE 405
Query: 158 AWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
+ P EF E F + ++F+ PFG G R C G + + + L LL +F
Sbjct: 406 FFPKPNEFTLENFAK---NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R CPG + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PTVP
Sbjct: 277 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTVPA 333
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 334 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 390
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 391 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 333
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 334 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 390
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 391 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 24 DILLQIRKDRGFKVDLTLD--HIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQ 81
D+L Q+ + + LD +I ++ +AG +T++ + +A+ +L+KNP ++KV
Sbjct: 232 DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVA 291
Query: 82 QE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIP 140
+E R L+ + V++L Y+ V+ E +RL PT P + + Y +
Sbjct: 292 EEATRVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 141 AKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQHFELIPFGAGRRICPGLN 198
V V + RD W ++ EEF PERF + S I QH PFG G+R C G
Sbjct: 349 KGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQ 404
Query: 199 MGIATVDLALANLLYKFDWE 218
+ L L +L FD+E
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTSPA 333
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 334 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 390
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 391 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +R+ PT P
Sbjct: 275 TFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRIWPTAPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPP 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 220 DLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLL 279
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+ + +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 280 SFTLYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 336
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 337 FSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 393
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 394 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG ++++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG ++++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG ++++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H P+G G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ + G +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG + ++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG + ++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ + G +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG + ++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ + G +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG + ++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ + G +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ + G +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ + G +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H P+G G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H P G G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ AG + ++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHELQKAAEEAARVLV---DPVPSHKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ AG + ++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHELQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ +AG +T++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQ 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H P G G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ AG + ++ +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 273
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTGPA 330
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 387
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 388 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 21 DIIDILLQIRKDRGFKVDLTLDH-----------------IKAVLMNVFVAGTDTSAATV 63
D++D ++ RK G + D L H I+ ++ AG + ++ +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 274
Query: 64 VWAMTYLMKNPRAMKKVQQEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+A+ +L+KNP ++K +E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTGPA 331
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVD-SCIDFKGQ 180
+ + Y + + V + RD W ++ EEF PERF + S I Q
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP---Q 388
Query: 181 HFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
H PFG G+R C G + L L +L FD+E
Sbjct: 389 H-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLM--KNPRAMKKVQQEIRSLIGGNKGFVN 96
++ + +++ AG TS T W++ +LM +N R + K+ QEI +N
Sbjct: 248 MSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEF----PAQLN 303
Query: 97 EDDV-QELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
D+V +E+ + + +E++R P + +L+ R+ ++ + Y +P ++ + +D
Sbjct: 304 YDNVMEEMPFAEQCARESIRRDPPLVMLM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQD 362
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ NP E+ PER + K FGAG C G G+ V LA +L +
Sbjct: 363 EEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDY 416
Query: 216 DWEM 219
D+E+
Sbjct: 417 DFEL 420
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 1 ELINEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSA 60
E ++++L P + + D+I IL + + L+ I A+++NV +A T+ +
Sbjct: 219 EQLSQYLMPVIKERRVNPGSDLISILCTSEYE---GMALSDKDILALILNVLLAATEPAD 275
Query: 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 120
T+ + +L+ NP M V + RSL+ + ET+R +P V
Sbjct: 276 KTLALMIYHLLNNPEQMNDVLAD-RSLV------------------PRAIAETLRYKPPV 316
Query: 121 PLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPER---FVDSCIDF 177
L +PR+ + V+ G EI T+VF A RDPEA+E P+ F R + S
Sbjct: 317 QL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSG 375
Query: 178 KGQHFELIPFGAGRRICPG 196
+H + FG+G C G
Sbjct: 376 AARH---LAFGSGIHNCVG 391
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 22/202 (10%)
Query: 41 LDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEI-RSL--------IGGN 91
L+ K L+ ++ + +T AT W++ +++NP AMK +E+ R+L + GN
Sbjct: 256 LEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGN 314
Query: 92 KGFVNEDDVQELHYLKAVVKETMRLQP-TVPLLVPRETIEKCVIDG-YEIPAKTLVFVNA 149
+++ ++ +L L +++KE++RL ++ + +E + DG Y I ++ +
Sbjct: 315 PICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 150 WAIGRDPEAWENPEEFYPERFVDS---------CIDFKGQHFELIPFGAGRRICPGLNMG 200
+ DPE + +P F +R++D C K +++ +PFG+G ICPG
Sbjct: 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYY-YMPFGSGATICPGRLFA 433
Query: 201 IATVDLALANLLYKFDWEMPPG 222
I + L +L F+ E+ G
Sbjct: 434 IHEIKQFLILMLSYFELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 22/202 (10%)
Query: 41 LDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEI-RSL--------IGGN 91
L+ K L+ ++ + +T AT W++ +++NP AMK +E+ R+L + GN
Sbjct: 256 LEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGN 314
Query: 92 KGFVNEDDVQELHYLKAVVKETMRLQP-TVPLLVPRETIEKCVIDG-YEIPAKTLVFVNA 149
+++ ++ +L L +++KE++RL ++ + +E + DG Y I ++ +
Sbjct: 315 PICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 150 WAIGRDPEAWENPEEFYPERFVDS---------CIDFKGQHFELIPFGAGRRICPGLNMG 200
+ DPE + +P F +R++D C K +++ +PFG+G ICPG
Sbjct: 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYY-YMPFGSGATICPGRLFA 433
Query: 201 IATVDLALANLLYKFDWEMPPG 222
I + L +L F+ E+ G
Sbjct: 434 IHEIKQFLILMLSYFELELIEG 455
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLM--KNPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS T W+M +LM KN + + K+ +EI +N
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ----LN 317
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
D+V E+ + + V+E++R P + L+V R + + Y +P ++ + D
Sbjct: 318 YDNVMDEMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ NP + PER D +D I FGAG C G + V LA ++
Sbjct: 377 EEAFPNPRLWDPER--DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
Query: 216 DWEM 219
D+++
Sbjct: 430 DFQL 433
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLM--KNPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS T W+M +LM KN + + K+ +EI +N
Sbjct: 253 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ----LN 308
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
D+V E+ + + V+E++R P + L+V R + + Y +P ++ + D
Sbjct: 309 YDNVMDEMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 367
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ NP + PER D +D I FGAG C G + V LA ++
Sbjct: 368 EEAFPNPRLWDPER--DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
Query: 216 DWEM 219
D+++
Sbjct: 421 DFQL 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLM--KNPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS T W+M +LM KN + + K+ +EI +N
Sbjct: 247 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ----LN 302
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
D+V E+ + + V+E++R P + L+V R + + Y +P ++ + D
Sbjct: 303 YDNVMDEMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 361
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ NP + PER D +D I FGAG C G + V LA ++
Sbjct: 362 EEAFPNPRLWDPER--DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
Query: 216 DWEM 219
D+++
Sbjct: 415 DFQL 418
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK--NPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS+ T W+M +LM N + ++ +++EI +N
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ----LN 317
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
++V E+ + + +E++R P + L++ R+ + + Y +P ++ + D
Sbjct: 318 YNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ P + PER D ++ I FGAG C G G+ V LA +
Sbjct: 377 EEAFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
Query: 216 DWEM 219
D+++
Sbjct: 430 DFQL 433
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK--NPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS+ T W+M +LM N + ++ +++EI +N
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ----LN 304
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
++V E+ + + +E++R P + L++ R+ + + Y +P ++ + D
Sbjct: 305 YNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 363
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ P + PER D ++ I FGAG C G G+ V LA +
Sbjct: 364 EEAFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
Query: 216 DWEM 219
D+++
Sbjct: 417 DFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK--NPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS+ T W+M +LM N + ++ +++EI +N
Sbjct: 250 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ----LN 305
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
++V E+ + + +E++R P + L++ R+ + + Y +P ++ + D
Sbjct: 306 YNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 364
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ P + PER D ++ I FGAG C G G+ V LA +
Sbjct: 365 EEAFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 417
Query: 216 DWEM 219
D+++
Sbjct: 418 DFQL 421
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK--NPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS+ T W+M +LM N + ++ +++EI +N
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ----LN 317
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
++V E+ + + +E++R P + L++ R+ + + Y +P ++ + D
Sbjct: 318 YNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ P + PER D ++ I FGAG C G G+ V LA +
Sbjct: 377 EEAFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
Query: 216 DWEM 219
D+++
Sbjct: 430 DFQL 433
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK--NPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS+ T W+M +LM N + ++ +++EI +N
Sbjct: 248 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ----LN 303
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
++V E+ + + +E++R P + L++ R+ + + Y +P ++ + D
Sbjct: 304 YNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 362
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ P + PER D ++ I FGAG C G G+ V LA +
Sbjct: 363 EEAFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 415
Query: 216 DWEM 219
D+++
Sbjct: 416 DFQL 419
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMK--NPRAMKKVQQEIRSLIGGNKGFVN 96
++L + +++ AG TS+ T W+M +LM N + ++ +++EI +N
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ----LN 304
Query: 97 EDDVQ-ELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRD 155
++V E+ + + +E++R P + L++ R+ + + Y +P ++ + D
Sbjct: 305 YNNVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 363
Query: 156 PEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
EA+ P + PER D ++ I FGAG C G G+ V LA +
Sbjct: 364 EEAFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
Query: 216 DWEM 219
D+++
Sbjct: 417 DFQL 420
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 17 PQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRA 76
P+ + + ++ +D G ++ +A+L+ ++V + A W M YL+ +P A
Sbjct: 231 PREQSWLGSYVKQLQDEGIDAEM---QRRAMLLQLWVTQGNAGPA-AFWVMGYLLTHPEA 286
Query: 77 MKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEK---CV 133
++ V++EI+ G K E+ + +V+ ET+RL T L+ R+ + C+
Sbjct: 287 LRAVREEIQ----GGKHLRLEERQKNTPVFDSVLWETLRL--TAAALITRDVTQDKKICL 340
Query: 134 IDGYEIPAK---TLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFE------- 183
+G E + L + DP+ + PE F +RF+++ K F+
Sbjct: 341 SNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKY 400
Query: 184 -LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 219
+P+G +CPG + + + + +L +FD E+
Sbjct: 401 PSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVEL 437
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 160 ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 215
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 216 DWEMPPGMKSQDL--DFDVLPGI 236
+++P QDL DF LP +
Sbjct: 375 RYDVP----DQDLSIDFARLPAL 393
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 160 ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 215
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 216 DWEMPPGMKSQDL--DFDVLPGI 236
+++P QDL DF LP +
Sbjct: 375 RYDVP----DQDLSIDFARLPAL 393
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 160 ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 215
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 216 DWEMPPGMKSQDL--DFDVLPGI 236
+++P QDL DF LP +
Sbjct: 383 RYDVP----DQDLSIDFARLPAL 401
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 160 ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 215
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 216 DWEMPPGMKSQDL--DFDVLPGI 236
+++P QDL DF LP +
Sbjct: 375 RYDVP----DQDLSIDFARLPAL 393
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 160 ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 215
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 216 DWEMPPGMKSQDL--DFDVLPGI 236
+++P QDL DF LP +
Sbjct: 383 RYDVP----DQDLSIDFARLPAL 401
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 110 VKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPER 169
V+E R P P L + V + E T V ++ + DP W++P+EF PER
Sbjct: 280 VQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 170 FVDSCIDFKGQHFELIPFGAGR----RICPGLNMGIATVDLALANLLYKFDWEMP 220
F + + F++IP G G CPG + I + +L L+++ ++++P
Sbjct: 339 FAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 160 ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 215
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 216 DWEMPPGMKSQDL--DFDVLPGI 236
+++P QDL DF LP +
Sbjct: 383 RYDVP----DQDLSIDFARLPAL 401
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 39/208 (18%)
Query: 18 QPED-IIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRA 76
+PED ++D L+ + + G DL D + + + + VAG +T+ + L+++P
Sbjct: 209 EPEDGLLDELIARQLEEG---DLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQ 265
Query: 77 MKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDG 136
+ + ++ ++ G V+EL +V +R+ +E IE + G
Sbjct: 266 IDVLLRDPGAVSG---------VVEELLRFTSVSDHIVRMA--------KEDIE---VGG 305
Query: 137 YEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPG 196
I A V V+ + RD +A+ENP+ F R +H + FG G C G
Sbjct: 306 ATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--------NARHH--VGFGHGIHQCLG 355
Query: 197 LNMGIATVDLALANLLYKFDWEMPPGMK 224
N+ A +++AL L + PG++
Sbjct: 356 QNLARAELEIALGGLFARI-----PGLR 378
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAA 61
L++ LD R P D++ +LLQ D L+ + A++ + AGTDT+
Sbjct: 208 LLHGVLDERRRN---PLENDVLTMLLQAEAD---GSRLSTKELVALVGAIIAAGTDTTIY 261
Query: 62 TVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVP 121
+ +A+ L+++P A++ V+ E G + + L + + T+R
Sbjct: 262 LIAFAVLNLLRSPEALELVKAE--------PGLMRNALDEVLRFENILRIGTVRFA---- 309
Query: 122 LLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQH 181
R+ +E C G I +VF+ + RD + P+ F D +
Sbjct: 310 ----RQDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDT 352
Query: 182 FELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
+ +G G +CPG+++ ++A+ + +F
Sbjct: 353 SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 31/183 (16%)
Query: 44 IKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQEL 103
++ ++ V VAG +T+ + AM ++P K+++ EL
Sbjct: 243 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKEN-----------------PEL 285
Query: 104 HYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPE 163
V+E +R PT+P+ R E ++G IP T VF+ A RDP + + +
Sbjct: 286 --APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 164 EFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGM 223
F D + + I FG G C G + + A+A L + D PP +
Sbjct: 344 RF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLD---PPQI 391
Query: 224 KSQ 226
+
Sbjct: 392 AGE 394
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 31/183 (16%)
Query: 44 IKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQEL 103
++ ++ V VAG +T+ + AM ++P K+++ N +
Sbjct: 233 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKE--------NPELAPQ------ 278
Query: 104 HYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPE 163
V+E +R PT+P+ R E ++G IP T VF+ A RDP + + +
Sbjct: 279 -----AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 333
Query: 164 EFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGM 223
F D + + I FG G C G + + A+A L + D PP +
Sbjct: 334 RF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLD---PPQI 381
Query: 224 KSQ 226
+
Sbjct: 382 AGE 384
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 2 LINEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAA 61
L++ LD R P D++ +LLQ D L+ + A++ + AGTDT+
Sbjct: 208 LLHGVLDERRRN---PLENDVLTMLLQAEAD---GSRLSTKELVALVGAIIAAGTDTTIY 261
Query: 62 TVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVP 121
+ +A+ L+++P A++ V+ E G + + L + + T+R
Sbjct: 262 LIAFAVLNLLRSPEALELVKAE--------PGLMRNALDEVLRFDNILRIGTVRFA---- 309
Query: 122 LLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQH 181
R+ +E C G I +VF+ + RD + P+ F D +
Sbjct: 310 ----RQDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDT 352
Query: 182 FELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
+ +G G +CPG+++ ++A+ + +F
Sbjct: 353 SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
+D+ +L+ R D G L+ + ++ L+ + AG +T+ + A+ L+ P +
Sbjct: 208 DDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLAL 267
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI-DGYE 138
V+ KG V DV V+ET+R +P V L R + + DG
Sbjct: 268 VR----------KGEVTWADV---------VEETLRHEPAVKHLPLRYAVTDIALPDGRT 308
Query: 139 IPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLN 198
I + + A R P+ E+ + F R V E + FG G C G
Sbjct: 309 IARGEPILASYAAANRHPDWHEDADTFDATRTVK----------EHLAFGHGVHFCLGAP 358
Query: 199 MGIATVDLALANLLYKF 215
+ V LAL +L +F
Sbjct: 359 LARMEVTLALESLFGRF 375
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 79 KVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID--- 135
++ +EIRS+I N G + ++++ K+VV E +R +P V R + VI+
Sbjct: 320 RLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAK-KDLVIESHD 378
Query: 136 -GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFV 171
+++ A +++ RDP+ ++ +EF PERFV
Sbjct: 379 AAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 79 KVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID--- 135
++ +EIRS+I N G + ++++ K+VV E +R +P V R + VI+
Sbjct: 320 RLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAK-KDLVIESHD 378
Query: 136 -GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFV 171
+++ A +++ RDP+ ++ +EF PERFV
Sbjct: 379 AAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 35/216 (16%)
Query: 1 ELINEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSA 60
E++N LD + P +D++ L++++ D + L+ D + ++ + + +AG +TS
Sbjct: 191 EVVNFILDLVERRRTEPG-DDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFETSV 247
Query: 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPT 119
+ + L+ +P + V+++ + L V+E +R + P
Sbjct: 248 SLIGIGTYLLLTHPDQLALVRRDPSA-------------------LPNAVEEILRYIAP- 287
Query: 120 VPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKG 179
P R E+ I G IP + V V A RDP+ + +P F D D +G
Sbjct: 288 -PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF------DVTRDTRG 340
Query: 180 QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
+ FG G C G + ++AL L +F
Sbjct: 341 H----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 106 LKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIG--RDPEAWENPE 163
+ A+V+E +R +P P + R T + + G IPA V VN W + RD +A ++P+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 330
Query: 164 EFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
F P R K + FG G C G + +AL ++ +F
Sbjct: 331 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 106 LKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIG--RDPEAWENPE 163
+ A+V+E +R +P P + R T + + G IPA V VN W + RD +A ++P+
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 350
Query: 164 EFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
F P R K + FG G C G + +AL ++ +F
Sbjct: 351 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 28 QIRKDRG--------FKVDLTLDHIK-----AVLMNVFVAGTDTSAATVVWAMTYLMKNP 74
+ RKDRG V L H+ + + + VAG +T A+ + W+ L P
Sbjct: 182 RFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRP 241
Query: 75 RAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI 134
K+V + A +E +RL P +L R +E+ ++
Sbjct: 242 DWQKRVAESE-------------------EAALAAFQEALRLYPPAWILTRR--LERPLL 280
Query: 135 DGYE-IPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRI 193
G + +P T + ++ + R + + E F PERF++ G++F PFG G+R+
Sbjct: 281 LGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFLEERGTPSGRYF---PFGLGQRL 335
Query: 194 CPGLNMGIATVDLALANLLYKF 215
C G + + + L +F
Sbjct: 336 CLGRDFALLEGPIVLRAFFRRF 357
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 28 QIRKDRG--------FKVDLTLDHIK-----AVLMNVFVAGTDTSAATVVWAMTYLMKNP 74
+ RKDRG V L H+ + + + VAG +T A+ + W+ L P
Sbjct: 182 RFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRP 241
Query: 75 RAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI 134
K+V + A +E +RL P +L R +E+ ++
Sbjct: 242 DWQKRVAESE-------------------EAALAAFQEALRLYPPAWILTRR--LERPLL 280
Query: 135 DGYE-IPAKTLVFVNAWAIGR--DPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGR 191
G + +P T + ++ + R PE E F PERF+ G++F PFG G+
Sbjct: 281 LGEDRLPQGTTLVLSPYVTQRLYFPEG----EAFQPERFLAERGTPSGRYF---PFGLGQ 333
Query: 192 RICPGLNMGIATVDLALANLLYKF 215
R+C G + + + L +F
Sbjct: 334 RLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPE 157
D V+E LKAV +E +R P V + R T EK I I LV V + RD E
Sbjct: 233 DYVREKGALKAV-EEALRFSPPV-MRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEE 290
Query: 158 AWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 217
+++P+ F P+R + + FG+G +C G + +AL KF
Sbjct: 291 VFKDPDSFIPDRTPNPH----------LSFGSGIHLCLGAPLARLEARIALEEFAKKF-- 338
Query: 218 EMPPGMKSQDLDFDVLPG 235
+ +K + +D +VL G
Sbjct: 339 RVKEIVKKEKIDNEVLNG 356
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 39/190 (20%)
Query: 38 DLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97
DLT+D + NV + G +T+ + A+ L P + ++ G +
Sbjct: 238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRD----------GSADV 287
Query: 98 DDVQELHYLKAVVKETMRLQPTVPLL-VPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDP 156
D VV+E +R T P + V R T I+G ++P+ T V A RDP
Sbjct: 288 D---------TVVEEVLRW--TSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDP 336
Query: 157 EAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLA-----LANL 211
+++P+ F P R +H I FG G C L +A ++L+ LA
Sbjct: 337 AEFDDPDTFLPGR-------KPNRH---ITFGHGMHHC--LGSALARIELSVVLRVLAER 384
Query: 212 LYKFDWEMPP 221
+ + D E P
Sbjct: 385 VSRVDLEREP 394
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 36/213 (16%)
Query: 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98
LT D I A + +AG +T+ + A +++ P + + G++
Sbjct: 241 LTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD------GSRA----- 289
Query: 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEA 158
AV++ETMR P V LV R + I + +P + + A RDP
Sbjct: 290 --------SAVIEETMRYDPPV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTI 340
Query: 159 WENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 218
P+ F P+R + FG G C G + +AL L +F
Sbjct: 341 VGAPDRFDPDR----------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF--- 387
Query: 219 MPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251
P S + ++ +T+ + LS+ +H
Sbjct: 388 -PEARLSGEPEYKR--NLTLRGMSTLSIAVHHH 417
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 41/216 (18%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
ED++ L++ + G + LT + + + + VAG +T+ + M L+ +P +
Sbjct: 231 EDLLSALVRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAA 288
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEI 139
++ ++ L G V+E +R + V R +E +DG I
Sbjct: 289 LRADMTLLDG-------------------AVEEMLRYEGPVESATYRFPVEPVDLDGTVI 329
Query: 140 PAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNM 199
PA V V R PE + +P F D + + FG G C G +
Sbjct: 330 PAGDTVLVVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPL 379
Query: 200 GIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPG 235
+A+ LL + DL DV PG
Sbjct: 380 ARLEARIAVRALLE----------RCPDLALDVSPG 405
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 41/216 (18%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
ED++ L++ + G + LT + + + + VAG +T+ + M L+ +P +
Sbjct: 231 EDLLSALVRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAA 288
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEI 139
++ ++ L G V+E +R + V R +E +DG I
Sbjct: 289 LRADMTLLDG-------------------AVEEMLRYEGPVESATYRFPVEPVDLDGTVI 329
Query: 140 PAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNM 199
PA V V R PE + +P F D D G + FG G C G +
Sbjct: 330 PAGDTVLVVLADAHRTPERFPDPHRF------DIRRDTAGH----LAFGHGIHFCIGAPL 379
Query: 200 GIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPG 235
+A+ LL + DL DV PG
Sbjct: 380 ARLEARIAVRALLE----------RCPDLALDVSPG 405
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 41/216 (18%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
ED++ L++ + G + LT + + + + VAG +T+ + M L+ +P +
Sbjct: 231 EDLLSALVRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAA 288
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEI 139
++ ++ L G V+E +R + V R +E +DG I
Sbjct: 289 LRADMTLLDG-------------------AVEEMLRYEGPVESATYRFPVEPVDLDGTVI 329
Query: 140 PAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNM 199
PA V V R PE + +P F D D G + FG G C G +
Sbjct: 330 PAGDTVLVVLADAHRTPERFPDPHRF------DIRRDTAGH----LAFGHGIHFCIGAPL 379
Query: 200 GIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPG 235
+A+ LL + DL DV PG
Sbjct: 380 ARLEARIAVRALLE----------RCPDLALDVSPG 405
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 45 KAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDD----- 99
+A+++ ++ + A W + +L+KNP A+ V+ E+ S++ + V++
Sbjct: 253 RALVLQLWATQGNMGPA-AFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 311
Query: 100 -VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI---DGYEIPAK---TLVFVNAWAI 152
+ L +V+ E++RL T + RE + + DG E + L+ +
Sbjct: 312 VLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 369
Query: 153 GRDPEAWENPEEFYPERFV--------DSCIDFKGQHFELIPFGAGRRICPGLNMGIATV 204
RDPE + +PE F RF+ D D K +P+GAG C G + + ++
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 429
Query: 205 DLALANLLYKFDWEM 219
+ +L D E+
Sbjct: 430 KQFVFLVLVHLDLEL 444
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 32/197 (16%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
+D+ L+Q ++ LT I + L + AG +T+ + +V A+ L +P
Sbjct: 211 DDLTSALIQASENGDH---LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP----- 262
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ-PTVPLLVPRETIEKCVIDGYE 138
E R+L+ + AVV+ET+R PT +L+ R E +
Sbjct: 263 ---EQRALVLSGEA-----------EWSAVVEETLRFSTPTSHVLI-RFAAEDVPVGDRV 307
Query: 139 IPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLN 198
IPA + V+ A+GRD E +RF D +H I FG G +CPG
Sbjct: 308 IPAGDALIVSYGALGRD----ERAHGPTADRF-DLTRTSGNRH---ISFGHGPHVCPGAA 359
Query: 199 MGIATVDLALANLLYKF 215
+ +AL L +F
Sbjct: 360 LSRMEAGVALPALYARF 376
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 45 KAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDD----- 99
+A+++ ++ + A W + +L+KNP A+ V+ E+ S++ + V++
Sbjct: 265 RALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323
Query: 100 -VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI---DGYEIPAK---TLVFVNAWAI 152
+ L +V+ E++RL T + RE + + DG E + L+ +
Sbjct: 324 VLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 381
Query: 153 GRDPEAWENPEEFYPERFV--------DSCIDFKGQHFELIPFGAGRRICPGLNMGIATV 204
RDPE + +PE F RF+ D D K +P+GAG C G + + ++
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 441
Query: 205 DLALANLLYKFDWEM 219
+ +L D E+
Sbjct: 442 KQFVFLVLVHLDLEL 456
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 79 KVQQEIRSLIGG-NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRE----TIEKCV 133
++ +EIR I G V + ++++ K+VV E++R++P VP + TIE
Sbjct: 302 QLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHD 361
Query: 134 IDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFV 171
+E+ ++F +DP+ ++ PEE+ P+RFV
Sbjct: 362 AT-FEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV 398
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 17 PQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRA 76
PQ +D+I +LL+ R+ K LT + + + + +AG +T+ + ++ L+++P
Sbjct: 202 PQ-QDMISMLLKGRE----KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQ 256
Query: 77 MKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL--VPRETIEKCVI 134
+ K++ E LIG V+E +R + + V E I+ C
Sbjct: 257 LLKLR-ENPDLIG------------------TAVEECLRYESPTQMTARVASEDIDIC-- 295
Query: 135 DGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRIC 194
G I V++ A RDP + NP+ F D + FG G +C
Sbjct: 296 -GVTIRQGEQVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFGHGHHVC 344
Query: 195 PGLNMGIATVDLALANLLYK--------FDWEMPP 221
G ++ +A+ LL + F+W P
Sbjct: 345 LGSSLARLEAQIAINTLLQRMPSLNLADFEWRYRP 379
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 37/200 (18%)
Query: 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAM 77
+P D D++ ++ D ++T + + + L AG +T+ + + + L+ P
Sbjct: 215 EPRD--DLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRP--- 269
Query: 78 KKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRL---QPTVPLLVPRETIEKCVI 134
++ E+R ++ + A V E +R+ ++PL V E IE +
Sbjct: 270 -ELPAELR---------------KDPDLMPAAVDELLRVLSVADSIPLRVAAEDIE---L 310
Query: 135 DGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRIC 194
G +PA V DPE +++PE +DF + FG G C
Sbjct: 311 SGRTVPADDGVIALLAGANHDPEQFDDPER----------VDFHRTDNHHVAFGYGVHQC 360
Query: 195 PGLNMGIATVDLALANLLYK 214
G ++ +++AL LL +
Sbjct: 361 VGQHLARLELEVALETLLRR 380
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 39/222 (17%)
Query: 3 INEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAAT 62
N +LD N + P+D +L I +D G V T + +K + + + G +T A
Sbjct: 199 FNRYLD-NLLARQRADPDD--GLLGMIVRDHGDNV--TDEELKGLCTALILGGVETVAGM 253
Query: 63 VVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPL 122
+ + + L+ NP ++ + F + + + VV E +R V
Sbjct: 254 IGFGVLALLDNPGQIELL-------------FESPEKAER------VVNELVRYLSPVQA 294
Query: 123 LVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHF 182
PR I+ VIDG I A V + RD +P+ +D
Sbjct: 295 PNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD----------VLDANRAAV 344
Query: 183 ELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMK 224
+ FG G C G A + ++ + Y+ W PG++
Sbjct: 345 SDVGFGHGIHYCVG-----AALARSMLRMAYQTLWRRFPGLR 381
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPG 196
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPG 196
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPG 196
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 20/119 (16%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNAL 244
FG G CPG + +L + +L + PG+K V P KK AL
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK-----LAVAPEDVPFKKGAL 393
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPG 196
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPG 196
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 186 PFGAGRRICPG 196
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 21/130 (16%)
Query: 40 TLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDD 99
T+D + + N+ G DT AA + +L ++P + +++
Sbjct: 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERP--------------- 264
Query: 100 VQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW 159
+ A E MR PTV V R + DG I LV++ + DP ++
Sbjct: 265 ----DLIPAAADELMRRYPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF 318
Query: 160 ENPEEFYPER 169
E PEE +R
Sbjct: 319 EAPEEVRFDR 328
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 77/196 (39%), Gaps = 32/196 (16%)
Query: 18 QPED-IIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRA 76
+P+D ++ LL + + G + L+ + + A+ M + +AG +T+ + + L+ +P
Sbjct: 201 EPDDALLSSLLAVSDEDGDR--LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD- 257
Query: 77 MKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDG 136
+K+ E SLI + V+E +R V R T E G
Sbjct: 258 QRKLLAEDPSLI------------------SSAVEEFLRFDSPVSQAPIRFTAEDVTYSG 299
Query: 137 YEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPG 196
IPA +V + A RD + P+ +D D G F FG G C G
Sbjct: 300 VTIPAGEMVMLGLAAANRDADWMPEPDR------LDITRDASGGVF----FGHGIHFCLG 349
Query: 197 LNMGIATVDLALANLL 212
+ +A+ L
Sbjct: 350 AQLARLEGRVAIGRLF 365
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 33/196 (16%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
+D++ +L + D + D +I A + + AG DT++++ A+ L +NP +
Sbjct: 236 DDVMSLLANSKLDGNYIDD---KYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLAL 292
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEI 139
+ + + +V E +R V + R + + G I
Sbjct: 293 AKSDPA-------------------LIPRLVDEAVRWTAPVKSFM-RTALADTEVRGQNI 332
Query: 140 PAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNM 199
+ ++ + RD E + NP+EF RF + +H + FG G +C G ++
Sbjct: 333 KRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN-------RH---LGFGWGAHMCLGQHL 382
Query: 200 GIATVDLALANLLYKF 215
+ + LL K
Sbjct: 383 AKLEMKIFFEELLPKL 398
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R V L + R E
Sbjct: 237 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKE 296
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 297 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 348
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R V L + R E
Sbjct: 236 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKE 295
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 296 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 347
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 101 QELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWE 160
+E YLKA+ +E +R P V V R+T E+ + I V V + RD E +
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTV-RKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 161 NPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
+ E+F P+R + + FG+G +C G + +A+ +F
Sbjct: 294 DGEKFIPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 101 QELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWE 160
+E YLKA+ +E +R P V V R+T E+ + I V V + RD E +
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTV-RKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 161 NPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
+ E+F P+R + + FG+G +C G + +A+ +F
Sbjct: 294 DGEKFIPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 32/196 (16%)
Query: 18 QPED-IIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRA 76
+P+D ++ LL + G + L+ + + A+ M + +AG +T+ + + L+ +P
Sbjct: 201 EPDDALLSSLLAVSDMDGDR--LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD- 257
Query: 77 MKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDG 136
+K+ E SLI + V+E +R V R T E G
Sbjct: 258 QRKLLAEDPSLI------------------SSAVEEFLRFDSPVSQAPIRFTAEDVTYSG 299
Query: 137 YEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPG 196
IPA +V + A RD + P+ +D D G F FG G C G
Sbjct: 300 VTIPAGEMVMLGLAAANRDADWMPEPDR------LDITRDASGGVF----FGHGIHFCLG 349
Query: 197 LNMGIATVDLALANLL 212
+ +A+ L
Sbjct: 350 AQLARLEGRVAIGRLF 365
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 236 LVAGNAAMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 295
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 296 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 347
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 104 HYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPE 163
+ L +V+E +R V + R + G +I A + +N A DP + P
Sbjct: 320 NLLPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPR 378
Query: 164 EFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 216
+F P R + +H + FGAG C GL++ + + L LL + D
Sbjct: 379 KFDPTRPAN-------RH---LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 237 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTATALAIKRTAKE 296
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 297 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 348
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 236 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTATALAIKRTAKE 295
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 296 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 347
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 236 LVAGNANMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 295
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 296 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 347
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 237 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 296
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 297 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 348
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 238 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 297
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 298 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 349
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 350 DHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 236 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 295
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 296 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 347
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 237 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 296
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 297 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 348
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 349 DHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 175 IDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF-DWEMPPGMKSQ 226
+DF Q FG G +CPG ++ + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCPGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 87 LIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLLVPRETIE 130
L+ GN VN +L LKA V+E R L + R E
Sbjct: 236 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKE 295
Query: 131 KCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAG 190
+I + A + + + RD E +ENP+EF R K + + FG G
Sbjct: 296 DVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQDPLGFGFG 347
Query: 191 RRICPGLNMGIATVDLALANLLYKF 215
C ++ A + + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 110 VKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPER 169
V+E R L + R E +I + A + + + RD E +ENP+EF R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 170 FVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 215
K + + FG G C ++ A + + L KF
Sbjct: 335 --------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 42/181 (23%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
ED++ ++L DRG ++ + I + ++ G +T A+ V A+ L+ +P +
Sbjct: 203 EDLLALMLDA-HDRGL---MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDL 258
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID---- 135
+++ L V+E +R P+V + + +D
Sbjct: 259 LRRRP-------------------DLLAQAVEECLRYDPSV-----QSNTRQLDVDVELR 294
Query: 136 GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICP 195
G + +V V A A RDP ++ P++F ER + FGAG R C
Sbjct: 295 GRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER----------DPVPSMSFGAGMRYCL 344
Query: 196 G 196
G
Sbjct: 345 G 345
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 29/190 (15%)
Query: 26 LLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIR 85
L ++RKD + ++ + + + F AG ++ + + A+ L++ P ++R
Sbjct: 206 LSRLRKDPAYS-HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLR 256
Query: 86 SLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLV 145
+L+ ++ + A V+E +R+ + +PR + + LV
Sbjct: 257 NLLH-----------EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELV 305
Query: 146 FVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVD 205
V DPE + NP +R + H FG G+ CPG +G
Sbjct: 306 LVLLEGANFDPEHFPNPGSIELDRPNPTS------HLA---FGRGQHFCPGSALGRRHAQ 356
Query: 206 LALANLLYKF 215
+ + LL K
Sbjct: 357 IGIEALLKKM 366
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 29/190 (15%)
Query: 26 LLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIR 85
L ++RKD + ++ + + + F AG ++ + + A+ L++ P ++R
Sbjct: 206 LSRLRKDPAYS-HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLR 256
Query: 86 SLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLV 145
+L+ ++ + A V+E +R+ + +PR + + LV
Sbjct: 257 NLLH-----------EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELV 305
Query: 146 FVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVD 205
V DPE + NP +R + H FG G+ CPG +G
Sbjct: 306 LVLLEGANFDPEHFPNPGSIELDRPNPT------SHLA---FGRGQHFCPGSALGRRHAQ 356
Query: 206 LALANLLYKF 215
+ + LL K
Sbjct: 357 IGIEALLKKM 366
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 29/190 (15%)
Query: 26 LLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIR 85
L ++RKD + ++ + + + F AG ++ + + A+ L++ P ++R
Sbjct: 205 LSRLRKDPAYS-HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLR 255
Query: 86 SLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLV 145
+L+ ++ + A V+E +R+ + +PR + + LV
Sbjct: 256 NLLH-----------EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELV 304
Query: 146 FVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVD 205
V DPE + NP +R + H FG G+ CPG +G
Sbjct: 305 LVLLEGANFDPEHFPNPGSIELDRPNPTS------HLA---FGRGQHFCPGSALGRRHAQ 355
Query: 206 LALANLLYKF 215
+ + LL K
Sbjct: 356 IGIEALLKKM 365
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E + G I A V+V+ A RDP+ + +P+ ID +
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR----------IDLDRDPNPHL 347
Query: 186 PFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMK 224
+G G C G + +L + LL + PG++
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERL-----PGLR 381
>pdb|1JLL|B Chain B, Crystal Structure Analysis Of The E197betaa Mutant Of E.
Coli Scs
pdb|1JLL|E Chain E, Crystal Structure Analysis Of The E197betaa Mutant Of E.
Coli Scs
Length = 388
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 18 QPEDIIDILLQIRKDR---GFKVDLTLDHIKAVLMNVF 52
+P + +D+ K+R FK+ L+ D +KAVL+N+F
Sbjct: 282 EPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIF 319
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Query: 126 RETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELI 185
R +E + G I A V+V+ A RDP+ + +P+ ID +
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR----------IDLDRDPNPHL 347
Query: 186 PFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMK 224
+G G C G + +L + LL + PG++
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERL-----PGLR 381
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 38/206 (18%)
Query: 20 EDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79
+D++ L+Q R + L+ + + + + VAG +++ + + LM P ++
Sbjct: 223 DDLVSALVQARDQQD---SLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQ 279
Query: 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQP-TVPLLVPRETIEKCVIDGYE 138
+ D EL + + V+E R P V VPR +E + G
Sbjct: 280 LL-----------------DRPEL--IPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVT 320
Query: 139 IPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLN 198
I A V + A RD + + + +R + QH + FG G C G
Sbjct: 321 IRAGEPVLASTGAANRDQAQFPDADRIDVDRTPN-------QH---LGFGHGVHHCLGAP 370
Query: 199 MGIATVDLALANLLYKFDWEMPPGMK 224
+ + +AL LL + PG++
Sbjct: 371 LARVELQVALEVLLQRL-----PGIR 391
>pdb|1SCU|B Chain B, The Crystal Structure Of Succinyl-Coa Synthetase From
Escherichia Coli At 2.5 Angstroms Resolution
pdb|1SCU|E Chain E, The Crystal Structure Of Succinyl-Coa Synthetase From
Escherichia Coli At 2.5 Angstroms Resolution
pdb|2SCU|B Chain B, A Detailed Description Of The Structure Of Succinyl-Coa
Synthetase From Escherichia Coli
pdb|2SCU|E Chain E, A Detailed Description Of The Structure Of Succinyl-Coa
Synthetase From Escherichia Coli
pdb|1JKJ|B Chain B, E. Coli Scs
pdb|1JKJ|E Chain E, E. Coli Scs
pdb|2NU6|B Chain B, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NU6|E Chain E, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NU7|B Chain B, C123as Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NU7|E Chain E, C123as Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NU8|B Chain B, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NU8|E Chain E, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NU9|B Chain B, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
Orthorhombic Crystal Form
pdb|2NU9|E Chain E, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
Orthorhombic Crystal Form
pdb|2NU9|G Chain G, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
Orthorhombic Crystal Form
pdb|2NU9|I Chain I, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
Orthorhombic Crystal Form
pdb|2NUA|B Chain B, C123av Mutant Of E. Coli Succinyl-Coa Synthetase
pdb|2NUA|E Chain E, C123av Mutant Of E. Coli Succinyl-Coa Synthetase
Length = 388
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 18 QPEDIIDILLQIRKDR---GFKVDLTLDHIKAVLMNVF 52
+P + +D+ K+R FK+ L+ D +KAVL+N+F
Sbjct: 282 EPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIF 319
>pdb|1CQI|B Chain B, Crystal Structure Of The Complex Of Adp And Mg2+ With
Dephosphorylated E. Coli Succinyl-Coa Synthetase
pdb|1CQI|E Chain E, Crystal Structure Of The Complex Of Adp And Mg2+ With
Dephosphorylated E. Coli Succinyl-Coa Synthetase
pdb|1CQJ|B Chain B, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa
Synthetase
pdb|1CQJ|E Chain E, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa
Synthetase
Length = 385
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 18 QPEDIIDILLQIRKDR---GFKVDLTLDHIKAVLMNVF 52
+P + +D+ K+R FK+ L+ D +KAVL+N+F
Sbjct: 282 EPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIF 319
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 29/190 (15%)
Query: 26 LLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIR 85
L ++RKD + ++ + + + F AG ++ + + A+ L++ P ++R
Sbjct: 206 LSRLRKDPAYS-HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLR 256
Query: 86 SLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLV 145
+L+ ++ + A V+E +R+ +PR + + LV
Sbjct: 257 NLLH-----------EKPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELV 305
Query: 146 FVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVD 205
V DPE + NP +R + H FG G+ CPG +G
Sbjct: 306 LVLLEGANFDPEHFPNPGSIELDRPNPTS------HLA---FGRGQHFCPGSALGRRHAQ 356
Query: 206 LALANLLYKF 215
+ + LL K
Sbjct: 357 IGIEALLKKM 366
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 29/190 (15%)
Query: 26 LLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIR 85
L ++RKD + ++ + + + F AG + + + A+ L++ P ++R
Sbjct: 206 LSRLRKDPAYS-HVSDELFATIGVTFFGAGVIATGSFLTTALISLIQRP--------QLR 256
Query: 86 SLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLV 145
+L+ ++ + A V+E +R+ + +PR + + LV
Sbjct: 257 NLLH-----------EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELV 305
Query: 146 FVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVD 205
V DPE + NP +R + H FG G+ CPG +G
Sbjct: 306 LVLLEGANFDPEHFPNPGSIELDRPNPTS------HLA---FGRGQHFCPGSALGRRHAQ 356
Query: 206 LALANLLYKF 215
+ + LL K
Sbjct: 357 IGIEALLKKM 366
>pdb|2DG2|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
pdb|2DG2|B Chain B, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
pdb|2DG2|C Chain C, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
pdb|2DG2|D Chain D, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
pdb|2DG2|E Chain E, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
pdb|2DG2|F Chain F, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
Length = 265
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 152 IGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL 211
+G P +E Y E VD+ F + PF + + GL + IA++D+
Sbjct: 137 LGEXPPEPXXVDELY-ELVVDAIFGFSFKGDVREPFHSILSVLSGLTVPIASIDIPSG-- 193
Query: 212 LYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251
W++ G S + D+L +T KK+A +YH
Sbjct: 194 -----WDVEKGNPS-GIQPDLLISLTAPKKSATHFTGRYH 227
>pdb|2O8N|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein
pdb|3RNO|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Nadp.
pdb|3RO7|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymine.
pdb|3ROE|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine
pdb|3ROE|B Chain B, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine
pdb|3ROE|C Chain C, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine
pdb|3ROE|D Chain D, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine
pdb|3ROE|E Chain E, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine
pdb|3ROE|F Chain F, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine
pdb|3ROG|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Thymidine 3'-Monophosphate
pdb|3ROX|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Theophylline
pdb|3ROZ|A Chain A, Crystal Structure Of Mouse Apolipoprotein A-I Binding
Protein In Complex With Nicotinamide
Length = 265
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 152 IGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL 211
+G P +E Y E VD+ F + PF + + GL + IA++D+
Sbjct: 137 LGEXPPEPXXVDELY-ELVVDAIFGFSFKGDVREPFHSILSVLSGLTVPIASIDIPSG-- 193
Query: 212 LYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251
W++ G S + D+L +T KK+A +YH
Sbjct: 194 -----WDVEKGNPS-GIQPDLLISLTAPKKSATHFTGRYH 227
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 108 AVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYP 167
A++ E +R+ P L R E I G I A + + A RDPE +++P+ F
Sbjct: 268 AIINEMVRMDPP-QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 168 ERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 216
R + + FG G C G + A A L +++
Sbjct: 327 TRPPAASRNLS--------FGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 108 AVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYP 167
A++ E +R+ P L R E I G I A + + A RDPE +++P+ F
Sbjct: 266 AIINEMVRMDPP-QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 168 ERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 216
R + + FG G C G + A A L +++
Sbjct: 325 TRPPAASRNLS--------FGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|1WTJ|A Chain A, Crystal Structure Of Delta1-Piperideine-2-Carboxylate
Reductase From Pseudomonas Syringae Pvar.Tomato
pdb|1WTJ|B Chain B, Crystal Structure Of Delta1-Piperideine-2-Carboxylate
Reductase From Pseudomonas Syringae Pvar.Tomato
pdb|2CWF|A Chain A, Crystal Structure Of Delta1-Piperideine-2-Carboxylate
Reductase From Pseudomonas Syringae Complexed With Nadph
pdb|2CWF|B Chain B, Crystal Structure Of Delta1-Piperideine-2-Carboxylate
Reductase From Pseudomonas Syringae Complexed With Nadph
pdb|2CWH|A Chain A, Crystal Structure Of Delta1-Piperideine-2-Carboxylate
Reductase From Pseudomonas Syringae Complexed With Nadph
And Pyrrole-2-Carboxylate
pdb|2CWH|B Chain B, Crystal Structure Of Delta1-Piperideine-2-Carboxylate
Reductase From Pseudomonas Syringae Complexed With Nadph
And Pyrrole-2-Carboxylate
Length = 343
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 184 LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKS 225
L+PFG + + + + L N ++FDW PG ++
Sbjct: 230 LLPFGGHKGSALSMMVELLAAGLTGGNFSFEFDWSKHPGAQT 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,044,026
Number of Sequences: 62578
Number of extensions: 343403
Number of successful extensions: 1215
Number of sequences better than 100.0: 176
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 873
Number of HSP's gapped (non-prelim): 179
length of query: 252
length of database: 14,973,337
effective HSP length: 97
effective length of query: 155
effective length of database: 8,903,271
effective search space: 1380007005
effective search space used: 1380007005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)