Query 048189
Match_columns 252
No_of_seqs 129 out of 1161
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:12:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048189.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048189hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 5.5E-53 1.2E-57 374.0 21.4 238 2-251 250-487 (489)
2 KOG0158 Cytochrome P450 CYP3/C 100.0 3.9E-52 8.5E-57 365.0 20.8 230 18-252 265-499 (499)
3 PLN03234 cytochrome P450 83B1; 100.0 2.9E-50 6.2E-55 362.6 22.8 233 18-251 263-498 (499)
4 PLN02971 tryptophan N-hydroxyl 100.0 2.5E-50 5.4E-55 365.9 21.1 228 19-251 304-533 (543)
5 PLN02183 ferulate 5-hydroxylas 100.0 3.3E-49 7.2E-54 356.9 22.1 231 19-251 271-511 (516)
6 PLN02394 trans-cinnamate 4-mon 100.0 4.5E-49 9.7E-54 355.2 22.3 226 19-251 273-501 (503)
7 PLN02966 cytochrome P450 83A1 100.0 6.2E-49 1.3E-53 354.1 22.6 231 19-249 265-497 (502)
8 PLN00168 Cytochrome P450; Prov 100.0 3.6E-48 7.9E-53 350.3 24.1 231 19-252 282-517 (519)
9 PLN00110 flavonoid 3',5'-hydro 100.0 1.6E-48 3.5E-53 351.2 21.3 229 19-252 266-497 (504)
10 PLN03112 cytochrome P450 famil 100.0 2.5E-48 5.4E-53 351.2 22.0 232 19-252 273-508 (514)
11 PLN02687 flavonoid 3'-monooxyg 100.0 5E-48 1.1E-52 349.3 22.1 233 18-251 269-508 (517)
12 PLN02169 fatty acid (omega-1)- 100.0 4E-48 8.6E-53 348.2 21.2 220 19-251 276-499 (500)
13 KOG0157 Cytochrome P450 CYP4/C 100.0 1.4E-48 2.9E-53 350.2 18.1 240 2-252 253-496 (497)
14 PLN03018 homomethionine N-hydr 100.0 1.1E-47 2.3E-52 347.3 23.3 228 19-251 291-523 (534)
15 PTZ00404 cytochrome P450; Prov 100.0 5.3E-48 1.1E-52 346.6 20.2 220 19-251 262-482 (482)
16 PF00067 p450: Cytochrome P450 100.0 2.2E-48 4.8E-53 343.9 17.5 217 3-223 224-441 (463)
17 PLN02290 cytokinin trans-hydro 100.0 1E-47 2.2E-52 347.4 21.1 223 19-252 291-515 (516)
18 PLN02500 cytochrome P450 90B1 100.0 1.2E-47 2.7E-52 344.8 21.5 197 19-223 262-468 (490)
19 PLN03195 fatty acid omega-hydr 100.0 1.5E-47 3.2E-52 346.2 19.5 226 19-252 270-516 (516)
20 PLN02426 cytochrome P450, fami 100.0 7.7E-47 1.7E-51 339.8 21.9 222 19-252 277-500 (502)
21 PLN02655 ent-kaurene oxidase 100.0 1.3E-46 2.9E-51 336.0 22.1 220 19-251 244-463 (466)
22 PLN02738 carotene beta-ring hy 100.0 2.2E-46 4.8E-51 343.3 23.0 220 19-251 373-594 (633)
23 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-46 3.7E-51 335.1 20.9 219 18-250 242-462 (463)
24 KOG0159 Cytochrome P450 CYP11/ 100.0 8.8E-47 1.9E-51 325.9 17.2 208 38-252 311-518 (519)
25 KOG0684 Cytochrome P450 [Secon 100.0 2.2E-46 4.7E-51 316.9 18.3 226 18-251 251-484 (486)
26 PLN03141 3-epi-6-deoxocathaste 100.0 5.5E-46 1.2E-50 330.9 20.0 216 19-252 232-450 (452)
27 PLN02302 ent-kaurenoic acid ox 100.0 6.1E-45 1.3E-49 327.3 21.2 221 18-251 264-487 (490)
28 PLN02936 epsilon-ring hydroxyl 100.0 1.3E-44 2.8E-49 325.0 22.2 221 19-252 260-482 (489)
29 PLN02987 Cytochrome P450, fami 100.0 4E-44 8.6E-49 319.9 21.9 219 19-252 249-469 (472)
30 PLN02196 abscisic acid 8'-hydr 100.0 3.6E-44 7.9E-49 320.1 20.5 215 19-251 246-462 (463)
31 COG2124 CypX Cytochrome P450 [ 100.0 4.9E-40 1.1E-44 288.8 16.2 175 18-222 213-387 (411)
32 PLN02648 allene oxide synthase 100.0 3.6E-37 7.9E-42 274.5 20.9 182 38-223 266-463 (480)
33 PF08492 SRP72: SRP72 RNA-bind 53.7 5.7 0.00012 24.8 0.5 8 166-173 44-51 (59)
34 PF09201 SRX: SRX; InterPro: 44.1 22 0.00048 26.3 2.4 23 192-214 18-40 (148)
35 COG2101 SPT15 TATA-box binding 41.8 12 0.00025 28.9 0.7 50 163-213 35-84 (185)
36 cd04518 TBP_archaea archaeal T 41.6 10 0.00023 29.3 0.4 36 163-198 29-64 (174)
37 PRK00394 transcription factor; 35.1 16 0.00035 28.4 0.6 34 163-196 28-61 (179)
38 PF08285 DPM3: Dolichol-phosph 30.8 73 0.0016 21.8 3.2 28 61-88 54-81 (91)
39 PF12508 DUF3714: Protein of u 30.1 40 0.00086 26.8 2.0 42 103-147 52-94 (200)
40 PF05952 ComX: Bacillus compet 29.4 58 0.0013 20.2 2.2 19 65-83 4-22 (57)
41 PF12444 Sox_N: Sox developmen 28.5 38 0.00082 22.8 1.4 21 202-222 60-80 (84)
42 KOG3506 40S ribosomal protein 27.9 28 0.0006 21.2 0.6 10 186-195 13-22 (56)
43 PF11138 DUF2911: Protein of u 26.0 67 0.0014 24.1 2.5 41 127-168 51-98 (145)
44 PF12554 MOZART1: Mitotic-spin 25.9 1.5E+02 0.0033 17.6 4.1 42 43-84 6-47 (48)
45 cd00652 TBP_TLF TATA box bindi 25.4 29 0.00062 26.9 0.5 56 163-219 29-87 (174)
46 PF14129 DUF4296: Domain of un 25.0 2.2E+02 0.0047 19.0 6.9 51 39-89 29-79 (87)
47 COG0851 MinE Septum formation 24.9 2E+02 0.0043 19.6 4.3 18 73-90 35-52 (88)
48 PLN00062 TATA-box-binding prot 24.4 28 0.00061 27.1 0.3 35 163-197 29-63 (179)
49 PRK06789 flagellar motor switc 22.7 79 0.0017 20.7 2.1 40 109-148 21-62 (74)
50 PF14550 Peptidase_U35_2: Puta 22.6 55 0.0012 23.7 1.5 21 127-147 72-92 (122)
51 PHA03162 hypothetical protein; 22.2 57 0.0012 23.9 1.4 24 188-211 2-25 (135)
52 PF02663 FmdE: FmdE, Molybdenu 21.9 79 0.0017 23.0 2.2 22 191-212 4-25 (131)
53 cd04516 TBP_eukaryotes eukaryo 20.1 38 0.00082 26.2 0.2 55 163-218 29-86 (174)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-53 Score=374.03 Aligned_cols=238 Identities=50% Similarity=0.871 Sum_probs=209.0
Q ss_pred ccccccCcccCCCCCCCcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHH
Q 048189 2 LINEHLDPNRTKSELPQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQ 81 (252)
Q Consensus 2 ~i~e~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~ 81 (252)
+|+||++++ . . +.++|++|.||+..++++... +++++|.+.+.++++||+|||++++.|++.+|++||++|+|++
T Consensus 250 ~i~eh~~~~-~-~--~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~q 324 (489)
T KOG0156|consen 250 IIDEHREKI-G-D--EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQ 324 (489)
T ss_pred HHHHHHhhh-c-c--CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence 577888876 2 2 133899999998866543333 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCC
Q 048189 82 QEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWEN 161 (252)
Q Consensus 82 ~Ei~~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~ 161 (252)
+||+++++. +..++.+++.++|||+|+|+|++|++|+.|..++|.+++|+.++||.||+||.|+++.|++|+||++|+|
T Consensus 325 eEId~vvG~-~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~d 403 (489)
T KOG0156|consen 325 EEIDEVVGK-GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWED 403 (489)
T ss_pred HHHHHHhCC-CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCC
Confidence 999999997 4449999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceecccc
Q 048189 162 PEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKK 241 (252)
Q Consensus 162 p~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (252)
|++|+||||++.+ +.+.....++|||.|+|.|||..+|++++.++++.++++|+|+.+++ .++++.. +.+...+
T Consensus 404 P~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~ 477 (489)
T KOG0156|consen 404 PEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKK 477 (489)
T ss_pred ccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecC
Confidence 9999999999985 33345678999999999999999999999999999999999999876 3456555 3555555
Q ss_pred CceeeEeecc
Q 048189 242 NALSLLAKYH 251 (252)
Q Consensus 242 ~~~~v~~~~r 251 (252)
.++.+...+|
T Consensus 478 ~pl~~~~~~r 487 (489)
T KOG0156|consen 478 KPLKAVPVPR 487 (489)
T ss_pred CcceeeeecC
Confidence 5777776665
No 2
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-52 Score=365.04 Aligned_cols=230 Identities=33% Similarity=0.550 Sum_probs=202.7
Q ss_pred CcchHHHHHHHhhhh--cCC--CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCC
Q 048189 18 QPEDIIDILLQIRKD--RGF--KVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKG 93 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~--~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~ 93 (252)
...|++|.+++.+.+ .++ ...++.++|+++++.+++||+|||++++++++|+||.||++|+||++||++++....+
T Consensus 265 ~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ 344 (499)
T KOG0158|consen 265 ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEG 344 (499)
T ss_pred CCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCC
Confidence 468999999998753 111 1159999999999999999999999999999999999999999999999999776444
Q ss_pred CCChhhhccchhHHHHHHhhhcCCCCCCCCCccccccccccc-CeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCC
Q 048189 94 FVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID-GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVD 172 (252)
Q Consensus 94 ~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~ 172 (252)
++.+.+.+|+||++||+|+||+||+.+. +.|.+++|.++. ++.|++|+.|.++.++.||||++||||++|+||||.+
T Consensus 345 -ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~ 422 (499)
T KOG0158|consen 345 -LTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEE 422 (499)
T ss_pred -CCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCC
Confidence 9999999999999999999999999998 789999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 173 SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 173 ~~~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
++.. ...+..|+|||.|+|.|+|.+||.+|+|+.|+.||++|+|+.-+ ..... ......+++..|+.++.+++++|+
T Consensus 423 ~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 423 ENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred Cccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCccceeeecCCceEEEEEeCC
Confidence 7654 44567899999999999999999999999999999999999877 32222 211223666778888999999885
No 3
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=2.9e-50 Score=362.62 Aligned_cols=233 Identities=55% Similarity=1.041 Sum_probs=203.0
Q ss_pred CcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCCh
Q 048189 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 97 (252)
..+|+++.+++...+.+....+++++|+++++++++||+|||+.+++|++++|++||++|+++++|+++++++ .+.++.
T Consensus 263 ~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~-~~~~~~ 341 (499)
T PLN03234 263 ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD-KGYVSE 341 (499)
T ss_pred CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCH
Confidence 3579999999764332222358999999999999999999999999999999999999999999999999875 566889
Q ss_pred hhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCCCCCCCCC
Q 048189 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVDSCID 176 (252)
Q Consensus 98 ~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~Rfl~~~~~ 176 (252)
++++++||++||++|++|++|+++...+|.+.+|.+++|+.||+||.|.++.+.+|+||++| +||++|+||||+++...
T Consensus 342 ~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~ 421 (499)
T PLN03234 342 EDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKG 421 (499)
T ss_pred HHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCC
Confidence 99999999999999999999999986679999999999999999999999999999999999 89999999999975432
Q ss_pred --CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 177 --FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 177 --~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
.......++|||.|+|+|+|+++|.+|+++++|.|+++|+|+++++..++.+.+...+++...++.++.+.++.|
T Consensus 422 ~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 422 VDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred cCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 223456799999999999999999999999999999999999987654444555556677777777898888876
No 4
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=2.5e-50 Score=365.92 Aligned_cols=228 Identities=29% Similarity=0.636 Sum_probs=197.3
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++...+++ ...+++++|++++.++++||+|||+.++.|++++|+.||++|+|+++||+++++. +..++.+
T Consensus 304 ~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~-~~~~t~~ 381 (543)
T PLN02971 304 IEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK-ERFVQES 381 (543)
T ss_pred CcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHH
Confidence 4699999998643221 2248999999999999999999999999999999999999999999999999986 5678999
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCC-
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDF- 177 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~- 177 (252)
++.++||++|+++|++|++|+++...+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++...+.
T Consensus 382 d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~ 461 (543)
T PLN02971 382 DIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVT 461 (543)
T ss_pred HhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCcccc
Confidence 9999999999999999999999987789999999999999999999999999999999999999999999999754321
Q ss_pred -CCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 178 -KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 178 -~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
...++.|+|||.|+|.|+|++||+.|++++++.|+++|+|+++++. ..+++....+ ++..+.++.+.+++|
T Consensus 462 ~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~ 533 (543)
T PLN02971 462 LTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMVGELR 533 (543)
T ss_pred ccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceeeeeec
Confidence 1234579999999999999999999999999999999999987654 2345554444 443334788888776
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=3.3e-49 Score=356.87 Aligned_cols=231 Identities=45% Similarity=0.868 Sum_probs=197.6
Q ss_pred cchHHHHHHHhhhhcC---------CCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 048189 19 PEDIIDILLQIRKDRG---------FKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIG 89 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~ 89 (252)
.+|+++.+++....+. ....++++++...++.+++||+|||+.+++|++++|+.||++|+|+++|++++++
T Consensus 271 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~ 350 (516)
T PLN02183 271 ETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG 350 (516)
T ss_pred cccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence 4689999997543211 1125899999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCC
Q 048189 90 GNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPER 169 (252)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R 169 (252)
. ...++.+++.++||++||++|++|++|+++.. .|.+.+|++++|+.|||||.|.++.+++|+|+++|+||++|+|||
T Consensus 351 ~-~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeR 428 (516)
T PLN02183 351 L-NRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSR 428 (516)
T ss_pred C-CCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchh
Confidence 5 45678999999999999999999999999985 589999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEe
Q 048189 170 FVDSCI-DFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLA 248 (252)
Q Consensus 170 fl~~~~-~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (252)
|++++. ......+.|+|||.|+|.|+|++||++|+++++|.|+++|++++.++......+.....+.+.++.+++++.+
T Consensus 429 fl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (516)
T PLN02183 429 FLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVP 508 (516)
T ss_pred hCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEe
Confidence 997543 1222345799999999999999999999999999999999999877643233444334455555667888888
Q ss_pred ecc
Q 048189 249 KYH 251 (252)
Q Consensus 249 ~~r 251 (252)
++|
T Consensus 509 ~~r 511 (516)
T PLN02183 509 TYR 511 (516)
T ss_pred ecC
Confidence 887
No 6
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=4.5e-49 Score=355.20 Aligned_cols=226 Identities=35% Similarity=0.689 Sum_probs=195.1
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
.+|+++.+++...+ +.++++++..++.++++||+|||+.+++|++++|++||++|++|++|++++++. +..++.+
T Consensus 273 ~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~-~~~~~~~ 347 (503)
T PLN02394 273 LKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP-GNQVTEP 347 (503)
T ss_pred hhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-CCCCCHh
Confidence 47999999976432 248999999999999999999999999999999999999999999999999875 4567889
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCC--
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCID-- 176 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~-- 176 (252)
++.++||++||++|++|++|+++...+|.+.+|++++|+.||+||.|.++.+.+|+|+++|+||++|+||||++.+..
T Consensus 348 ~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~ 427 (503)
T PLN02394 348 DTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVE 427 (503)
T ss_pred HHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCccc
Confidence 999999999999999999999998778999999999999999999999999999999999999999999999975432
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCc-eeccccCceeeEeecc
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPG-ITMHKKNALSLLAKYH 251 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~r 251 (252)
.......++|||.|+|+|+|++||.+|+++++|.|+++|+|++.++. +.++.....+ +....+.+++|++.+|
T Consensus 428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r 501 (503)
T PLN02394 428 ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ--SKIDVSEKGGQFSLHIAKHSTVVFKPR 501 (503)
T ss_pred ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC--CcCccccccCceeeccCCCceEEeecC
Confidence 12234579999999999999999999999999999999999987764 2345544443 4442333888888887
No 7
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=6.2e-49 Score=354.06 Aligned_cols=231 Identities=50% Similarity=0.977 Sum_probs=196.8
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCC-CCCCh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNK-GFVNE 97 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~ 97 (252)
..|+++.+++...+......++++++...++++++||+|||+.+++|++++|++||++|+++++|++++++.+. ..++.
T Consensus 265 ~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~ 344 (502)
T PLN02966 265 TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTE 344 (502)
T ss_pred cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCH
Confidence 46899999976543221235899999999999999999999999999999999999999999999999987532 34788
Q ss_pred hhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCCCCCCCCC
Q 048189 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVDSCID 176 (252)
Q Consensus 98 ~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~Rfl~~~~~ 176 (252)
+++.++||++|+++|++|++|+++...+|.+.+|++++|+.||+||.|.++.+.+|+||++| |||++|+||||++...+
T Consensus 345 ~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~ 424 (502)
T PLN02966 345 DDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD 424 (502)
T ss_pred hhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC
Confidence 99999999999999999999999987789999999999999999999999999999999999 99999999999975433
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEee
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAK 249 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (252)
.......|+|||.|+|+|+|++||.+|+++++|.|+++|+|++.++...+.+++....++...+...+.+..+
T Consensus 425 ~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (502)
T PLN02966 425 FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPE 497 (502)
T ss_pred cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEE
Confidence 2233457999999999999999999999999999999999999877544445555555666544445655443
No 8
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=3.6e-48 Score=350.33 Aligned_cols=231 Identities=33% Similarity=0.581 Sum_probs=196.8
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.|++....++.+..+++++++.+++.+++||+|||+.+++|++++|+.||++|+++++||+++++...+.++.+
T Consensus 282 ~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~ 361 (519)
T PLN00168 282 EHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEE 361 (519)
T ss_pred cccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHH
Confidence 46899999976532222235999999999999999999999999999999999999999999999999997544668899
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCC---
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCI--- 175 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~--- 175 (252)
++.++||+++|++|++|++|+.+..++|.+.+|++++|+.||+|+.|.++.+++|+||++|+||++|+||||++...
T Consensus 362 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~ 441 (519)
T PLN00168 362 DVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEG 441 (519)
T ss_pred HhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCcc
Confidence 99999999999999999999998877899999999999999999999999999999999999999999999997421
Q ss_pred -CC-CCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 176 -DF-KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 176 -~~-~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
+. ....+.++|||.|+|+|+|++||.+|++++++.|+++|+|++.++. .+++....+++..++.++.|.+++|.
T Consensus 442 ~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~R~ 517 (519)
T PLN00168 442 VDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREFTTVMAKPLRARLVPRR 517 (519)
T ss_pred ccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhceeEEeecCCcEEEEEecc
Confidence 11 1224579999999999999999999999999999999999987653 22332223344445557888888874
No 9
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=1.6e-48 Score=351.17 Aligned_cols=229 Identities=42% Similarity=0.809 Sum_probs=198.7
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++..... .+..++++++..+++++++||++||+.+++|++++|++||++|+++++|++++++. ...++.+
T Consensus 266 ~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~ 343 (504)
T PLN00110 266 NPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR-NRRLVES 343 (504)
T ss_pred CCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHH
Confidence 468999999754322 12359999999999999999999999999999999999999999999999999875 4568899
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCCC
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFK 178 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~~ 178 (252)
+++++||+++|++|++|++|+++..++|.+.+|++++|+.||+|+.|.++.+++|+|+++|+||++|+||||++......
T Consensus 344 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~ 423 (504)
T PLN00110 344 DLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKI 423 (504)
T ss_pred HhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCccc
Confidence 99999999999999999999999877899999999999999999999999999999999999999999999996532111
Q ss_pred ---CCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 179 ---GQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 179 ---~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
.....++|||.|+|.|+|++||..|++++++.|+++|+|++.++. ++++....+++..++.++++++++|+
T Consensus 424 ~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~ 497 (504)
T PLN00110 424 DPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVTPRL 497 (504)
T ss_pred ccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEeeccCC
Confidence 123479999999999999999999999999999999999987653 23333344566777779999998884
No 10
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=2.5e-48 Score=351.19 Aligned_cols=232 Identities=40% Similarity=0.729 Sum_probs=199.5
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++...++ .+..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++++++. .+.++.+
T Consensus 273 ~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~-~~~~t~~ 350 (514)
T PLN03112 273 DMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR-NRMVQES 350 (514)
T ss_pred cchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC-CCcCChh
Confidence 469999999854322 22358999999999999999999999999999999999999999999999999876 4568999
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCC--
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCID-- 176 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~-- 176 (252)
++.++||++|+++|++|++|+++..++|.+.+|++++|+.||+|+.|.++.+.+|+||++|+||++|+|+||....+.
T Consensus 351 ~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~ 430 (514)
T PLN03112 351 DLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRV 430 (514)
T ss_pred hhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCcc
Confidence 999999999999999999999998678999999999999999999999999999999999999999999998764221
Q ss_pred -C-CCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 177 -F-KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 177 -~-~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
. ....+.++|||.|+|.|+|++||.+|++++++.|+++|+|++.++...+++++....++.++++.++.+.+++|.
T Consensus 431 ~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 508 (514)
T PLN03112 431 EISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL 508 (514)
T ss_pred ccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence 1 112457999999999999999999999999999999999998765433344444445666666779999999883
No 11
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=5e-48 Score=349.29 Aligned_cols=233 Identities=42% Similarity=0.819 Sum_probs=199.3
Q ss_pred CcchHHHHHHHhhhhc---CCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCC
Q 048189 18 QPEDIIDILLQIRKDR---GFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGF 94 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~ 94 (252)
...|+++.+++...+. +.+..++++++++++..+++||++||+.+++|++++|++||++|+++++|++++++. ...
T Consensus 269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~ 347 (517)
T PLN02687 269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR-DRL 347 (517)
T ss_pred ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCC
Confidence 3579999999865431 123359999999999999999999999999999999999999999999999999875 466
Q ss_pred CChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCC
Q 048189 95 VNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSC 174 (252)
Q Consensus 95 ~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~ 174 (252)
++.+++.++||++|+++|++|++|+++..++|.+.+|++++|+.||+|+.|.++.+.+|+||++|+||++|+||||++..
T Consensus 348 ~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~ 427 (517)
T PLN02687 348 VSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGG 427 (517)
T ss_pred CCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCC
Confidence 88999999999999999999999999987789999999999999999999999999999999999999999999999753
Q ss_pred CC----CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeec
Q 048189 175 ID----FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKY 250 (252)
Q Consensus 175 ~~----~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (252)
.. .......++|||.|+|.|+|++||.+|++++++.|+++|+|++.++..++++++....++...+..++.+.+++
T Consensus 428 ~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (517)
T PLN02687 428 EHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRP 507 (517)
T ss_pred CccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeecc
Confidence 21 11234579999999999999999999999999999999999998764333333333334555555688888888
Q ss_pred c
Q 048189 251 H 251 (252)
Q Consensus 251 r 251 (252)
|
T Consensus 508 R 508 (517)
T PLN02687 508 R 508 (517)
T ss_pred C
Confidence 7
No 12
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=4e-48 Score=348.22 Aligned_cols=220 Identities=22% Similarity=0.520 Sum_probs=186.5
Q ss_pred cchHHHHHHHhhhhc-CCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCCh
Q 048189 19 PEDIIDILLQIRKDR-GFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 97 (252)
.+|+++.+++..... .....++++++.++++++++||+|||+++++|++++|+.||++|+++++|+++++ +.
T Consensus 276 ~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~-------~~ 348 (500)
T PLN02169 276 SKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF-------DN 348 (500)
T ss_pred CcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC-------CH
Confidence 479999999764221 1112478899999999999999999999999999999999999999999998864 46
Q ss_pred hhhccchhHHHHHHhhhcCCCCCCCCCccccccccc-ccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCCCCCCCC
Q 048189 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCV-IDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVDSCI 175 (252)
Q Consensus 98 ~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~-i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~Rfl~~~~ 175 (252)
+++.++||+++|++|++|++|+++... |.+.+|.+ ++|+.||+|+.|.++.+++||||++| +||++|+||||++.++
T Consensus 349 ~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~ 427 (500)
T PLN02169 349 EDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNG 427 (500)
T ss_pred HHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCC
Confidence 889999999999999999999999854 66666645 58999999999999999999999999 8999999999997644
Q ss_pred CCC-CCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 176 DFK-GQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 176 ~~~-~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
... ..++.|+|||+|+|.|+|+.||.+|++++++.|+++|+|++.++. . +....+++..++.++.|++++|
T Consensus 428 ~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~--~~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 428 GLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---K--IEAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred CccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---C--cccccceEEecCCCEEEEEEeC
Confidence 322 235689999999999999999999999999999999999987542 2 2223456677778999999887
No 13
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-48 Score=350.20 Aligned_cols=240 Identities=32% Similarity=0.587 Sum_probs=199.8
Q ss_pred ccccccCcccCCCCC--CCcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHH
Q 048189 2 LINEHLDPNRTKSEL--PQPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKK 79 (252)
Q Consensus 2 ~i~e~~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~ 79 (252)
+|+++++.....+.. ....|+++.+. ...+ ..+++++|++.+.++++||+|||+.+++|++++|+.||++|++
T Consensus 253 iI~~rr~~~~~~~~~~~~~~~d~L~~~~-~~~~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k 327 (497)
T KOG0157|consen 253 IIRERREELEKEGSGEEKKRLDFLDTLL-LEED----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEK 327 (497)
T ss_pred HHHHHHHHHHhcCCcccchhhhHHHHHH-Hhcc----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHH
Confidence 566666554332221 23567777622 2222 3699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCChhhhccchhHHHHHHhhhcCCCCCCCCCccccccccccc-CeeeCCCCEEEecchhhccCCCC
Q 048189 80 VQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVID-GYEIPAKTLVFVNAWAIGRDPEA 158 (252)
Q Consensus 80 l~~Ei~~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~-g~~ip~g~~v~~~~~~~~~d~~~ 158 (252)
+++|+.++++.+...++....++|+|+++|++|++|++|++|. ..|.+.+|++++ |+.||+|+.|.++.+.+|||+.+
T Consensus 328 ~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~ 406 (497)
T KOG0157|consen 328 LREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRV 406 (497)
T ss_pred HHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccc
Confidence 9999999997534433444444699999999999999999998 669999999995 89999999999999999999999
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCcee
Q 048189 159 WE-NPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGIT 237 (252)
Q Consensus 159 ~~-~p~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 237 (252)
|+ ||++|||+||++........+++|+|||+|+|.|+|+.||++||+++++.|+++|+|++..+.. ..+...++
T Consensus 407 ~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~ 481 (497)
T KOG0157|consen 407 WGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELT 481 (497)
T ss_pred cCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEE
Confidence 97 9999999999975433244568999999999999999999999999999999999999887631 33455688
Q ss_pred ccccCceeeEeeccC
Q 048189 238 MHKKNALSLLAKYHE 252 (252)
Q Consensus 238 ~~~~~~~~v~~~~r~ 252 (252)
.++..++.|++++|.
T Consensus 482 l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 482 LRPKNGLKVKLRPRG 496 (497)
T ss_pred EEecCCeEEEEEeCC
Confidence 888889999999984
No 14
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.1e-47 Score=347.33 Aligned_cols=228 Identities=27% Similarity=0.523 Sum_probs=194.7
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++...+.+ ...+++++++.+++.+++||++||+.+++|++++|+.||++|+++++||+++++. ...++.+
T Consensus 291 ~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~-~~~~~~~ 368 (534)
T PLN03018 291 VEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGK-DRLVQES 368 (534)
T ss_pred cccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-CCCCCHH
Confidence 4699999997643321 1148999999999999999999999999999999999999999999999999875 5668889
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCC-
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDF- 177 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~- 177 (252)
++.++||++++++|++|++|+++...+|.+.+|++++|+.||+|+.|+++.+++|+||++|+||++|+|+||++.++..
T Consensus 369 ~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~ 448 (534)
T PLN03018 369 DIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITK 448 (534)
T ss_pred HhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccc
Confidence 9999999999999999999999986679999999999999999999999999999999999999999999999754321
Q ss_pred ----CCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 178 ----KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 178 ----~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
......++|||+|+|.|+|++||.+|++++++.|+++|+|++.++. ..+++....++... +.++.|.+++|
T Consensus 449 ~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~-p~~~~v~~~~R 523 (534)
T PLN03018 449 EVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM-AKPLLLSVEPR 523 (534)
T ss_pred cccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceec-CCCeEEEEEec
Confidence 1234579999999999999999999999999999999999987653 22333323344444 35888888887
No 15
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=5.3e-48 Score=346.55 Aligned_cols=220 Identities=31% Similarity=0.554 Sum_probs=188.7
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
++|+++.+++..... ......++++++..+++||+|||+.+++|++++|++||++|++|++|++++++. ...++.+
T Consensus 262 ~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~-~~~~~~~ 337 (482)
T PTZ00404 262 PRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG-RNKVLLS 337 (482)
T ss_pred cccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC-CCCCCcc
Confidence 579999999763211 122344689999999999999999999999999999999999999999999876 4567889
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccc-cCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCC
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI-DGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDF 177 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~ 177 (252)
++.++||+++|++|++|++|+++...+|.+.+|+++ +|+.||+|+.|.++.+++|+||++||||++|+||||++..
T Consensus 338 ~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~--- 414 (482)
T PTZ00404 338 DRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD--- 414 (482)
T ss_pred ccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC---
Confidence 999999999999999999999997678999999999 9999999999999999999999999999999999999742
Q ss_pred CCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 178 KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 178 ~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
.+..|+|||.|+|.|+|++||.+|++++++.++++|+|+..++.+ .......+++++ +.++.|.+++|
T Consensus 415 --~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 415 --SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred --CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccccceeec-CCCceeeeecC
Confidence 345799999999999999999999999999999999999876532 222223345555 44788888876
No 16
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=2.2e-48 Score=343.93 Aligned_cols=217 Identities=39% Similarity=0.690 Sum_probs=188.2
Q ss_pred cccccCcccCCCCCCCcchHHHHHHHhh-hhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHH
Q 048189 3 INEHLDPNRTKSELPQPEDIIDILLQIR-KDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQ 81 (252)
Q Consensus 3 i~e~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~ 81 (252)
|+++.+..... .....|+++.++... ...+ +..++.++++..++.+++||++||+.+++|++++|++||++|++|+
T Consensus 224 i~~~~~~~~~~--~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~ 300 (463)
T PF00067_consen 224 IEERREELDDG--DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLR 300 (463)
T ss_dssp HHHHHHSHHSS--SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ccccccccccc--cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 44444444442 124689999999987 2221 1469999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCC
Q 048189 82 QEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWEN 161 (252)
Q Consensus 82 ~Ei~~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~ 161 (252)
+|++++++. ...++.+++.++|||+||++|++|++|+.+..++|.+.+|++++|+.||+|+.|+++.+.+|+|+++|+|
T Consensus 301 ~Ei~~~~~~-~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~d 379 (463)
T PF00067_consen 301 EEIDSVLGD-GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPD 379 (463)
T ss_dssp HHHHHHTTT-SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSS
T ss_pred ccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999954 5678899999999999999999999999996688999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCC
Q 048189 162 PEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGM 223 (252)
Q Consensus 162 p~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~ 223 (252)
|++|+|+||++.+.........|+|||.|+|.|+|++||++|++++++.|+++|+|++.++.
T Consensus 380 p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~ 441 (463)
T PF00067_consen 380 PDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGS 441 (463)
T ss_dssp TTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTS
T ss_pred ccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCC
Confidence 99999999999866223456689999999999999999999999999999999999997653
No 17
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1e-47 Score=347.38 Aligned_cols=223 Identities=26% Similarity=0.480 Sum_probs=193.5
Q ss_pred cchHHHHHHHhhhhc-CCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCCh
Q 048189 19 PEDIIDILLQIRKDR-GFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 97 (252)
.+|+++.+++..... ..+..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++++. ..++.
T Consensus 291 ~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~--~~~~~ 368 (516)
T PLN02290 291 GDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG--ETPSV 368 (516)
T ss_pred CCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC--CCCCH
Confidence 579999999754322 112348899999999999999999999999999999999999999999999999985 37889
Q ss_pred hhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCCCCCCCCC
Q 048189 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVDSCID 176 (252)
Q Consensus 98 ~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~Rfl~~~~~ 176 (252)
++++++||++|||+|++|++|+++. .+|.+.+|++++|+.||+||.|.++.+++|+||++| +||++|+||||++...
T Consensus 369 ~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~- 446 (516)
T PLN02290 369 DHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF- 446 (516)
T ss_pred HHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC-
Confidence 9999999999999999999999986 789999999999999999999999999999999999 8999999999995421
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
.....|+|||.|+|.|+|+.||++|++++++.|+++|++++.++.. .....+++..|+.++.|++++|.
T Consensus 447 --~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 447 --APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred --CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCccceeeecCCCCCeEEEEeCC
Confidence 1234699999999999999999999999999999999999876531 11122466677788999998874
No 18
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=1.2e-47 Score=344.76 Aligned_cols=197 Identities=22% Similarity=0.480 Sum_probs=176.9
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC----CCCC
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGG----NKGF 94 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~----~~~~ 94 (252)
..|+++.+++. ..++++++++++.++++||+|||+.+++|++++|+.||++|+++++|++++++. ....
T Consensus 262 ~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~ 334 (490)
T PLN02500 262 EDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESE 334 (490)
T ss_pred cchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCC
Confidence 46999999863 148999999999999999999999999999999999999999999999998742 1345
Q ss_pred CChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCC
Q 048189 95 VNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSC 174 (252)
Q Consensus 95 ~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~ 174 (252)
++.+++.++||++||++|++|++|+++. .+|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++.+
T Consensus 335 ~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~ 413 (490)
T PLN02500 335 LNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNN 413 (490)
T ss_pred CCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCC
Confidence 7899999999999999999999999998 579999999999999999999999999999999999999999999999753
Q ss_pred CCCC------CCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCC
Q 048189 175 IDFK------GQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGM 223 (252)
Q Consensus 175 ~~~~------~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~ 223 (252)
.... ..++.|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++.
T Consensus 414 ~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~ 468 (490)
T PLN02500 414 NRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD 468 (490)
T ss_pred cccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC
Confidence 2211 134579999999999999999999999999999999999987653
No 19
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=1.5e-47 Score=346.21 Aligned_cols=226 Identities=28% Similarity=0.515 Sum_probs=189.0
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC-------
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGN------- 91 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~------- 91 (252)
.+|+++.+++...+. +..+++++++++++++++||+|||+.+++|++++|+.||++|++|++|+++++...
T Consensus 270 ~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~ 347 (516)
T PLN03195 270 KHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPE 347 (516)
T ss_pred cccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccccc
Confidence 568999999754321 23589999999999999999999999999999999999999999999999886431
Q ss_pred ------------CCCCChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccc-cCeeeCCCCEEEecchhhccCCCC
Q 048189 92 ------------KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI-DGYEIPAKTLVFVNAWAIGRDPEA 158 (252)
Q Consensus 92 ------------~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~ 158 (252)
...++.+++.++||++|||+|++|++|+++.. .|.+.+|..+ +|+.||+|+.|.++.+++|+||++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~ 426 (516)
T PLN03195 348 DSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYN 426 (516)
T ss_pred ccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhh
Confidence 23478899999999999999999999999985 4666666555 899999999999999999999999
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCcee
Q 048189 159 W-ENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGIT 237 (252)
Q Consensus 159 ~-~~p~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 237 (252)
| +||++|+||||++........++.|+|||+|+|.|+|++||++|++++++.|+++|+|++.++. +. ......+
T Consensus 427 ~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~ 501 (516)
T PLN03195 427 WGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---PV--KYRMMTI 501 (516)
T ss_pred hccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---cc--eeeeeeE
Confidence 9 9999999999996432112234579999999999999999999999999999999999986543 22 2222344
Q ss_pred ccccCceeeEeeccC
Q 048189 238 MHKKNALSLLAKYHE 252 (252)
Q Consensus 238 ~~~~~~~~v~~~~r~ 252 (252)
..++.++.|.+++|+
T Consensus 502 ~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 502 LSMANGLKVTVSRRS 516 (516)
T ss_pred EecCCCEEEEEEeCC
Confidence 556678999999885
No 20
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=7.7e-47 Score=339.77 Aligned_cols=222 Identities=24% Similarity=0.405 Sum_probs=190.1
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++.. .+++++.++++++++||+|||+.+++|++++|++||++|++|++|++++++.+...++.+
T Consensus 277 ~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~ 348 (502)
T PLN02426 277 SKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFE 348 (502)
T ss_pred cchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHH
Confidence 479999999642 267899999999999999999999999999999999999999999999887544468899
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccc-cCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCCCCCCCCC
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVI-DGYEIPAKTLVFVNAWAIGRDPEAW-ENPEEFYPERFVDSCID 176 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~Rfl~~~~~ 176 (252)
++.++||++||++|++|++|+++.. .|.+.+|.++ +|+.||+||.|.++.+++|+|+++| +||++|+||||++....
T Consensus 349 ~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~ 427 (502)
T PLN02426 349 EMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF 427 (502)
T ss_pred HHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc
Confidence 9999999999999999999999985 4888888777 8999999999999999999999999 99999999999974211
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
....++.++|||.|+|.|+|++||.+|++++++.|+++|++++.++.. + ......+++..++.++.|++++|.
T Consensus 428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 428 VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-R--APRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-C--CCcccceeEEecCCCEEEEEEEcc
Confidence 122345789999999999999999999999999999999999864321 1 122233566777778999998873
No 21
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=1.3e-46 Score=336.03 Aligned_cols=220 Identities=33% Similarity=0.570 Sum_probs=193.2
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++.. ..++++++.++++++++||++||+.+++|++++|+.||++|+++++|++.+++. .. ++.+
T Consensus 244 ~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~-~~~~ 315 (466)
T PLN02655 244 RDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD-ER-VTEE 315 (466)
T ss_pred cccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-CC-CCHH
Confidence 468999999753 248999999999999999999999999999999999999999999999999885 33 8999
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCCC
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFK 178 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~~ 178 (252)
++.++||++++++|++|++|+.+...+|.+.+|++++|+.||+|+.|+++.+++|+|+++|+||++|+|+||++.....
T Consensus 316 ~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~- 394 (466)
T PLN02655 316 DLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES- 394 (466)
T ss_pred HHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc-
Confidence 9999999999999999999999987789999999999999999999999999999999999999999999999754321
Q ss_pred CCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 179 GQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 179 ~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
...+.++|||+|+|.|+|++||..|++++++.|+++|++++.++.. . .....+++..++.++.|++++|
T Consensus 395 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~r 463 (466)
T PLN02655 395 ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHLKPR 463 (466)
T ss_pred CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEEeec
Confidence 1235799999999999999999999999999999999999876642 1 1223455565666888888777
No 22
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=2.2e-46 Score=343.31 Aligned_cols=220 Identities=30% Similarity=0.605 Sum_probs=190.4
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.+++.. ..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++++++ +..++.+
T Consensus 373 ~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~--~~~~t~e 444 (633)
T PLN02738 373 DPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG--DRFPTIE 444 (633)
T ss_pred cchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC--CCCCCHH
Confidence 468999998642 24899999999999999999999999999999999999999999999999987 3567899
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCC--C
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCI--D 176 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~--~ 176 (252)
+++++|||+|||+|+||++|+.+. ..|.+.+|.+++||.||+||.|.++.+.+|+||++||||++|+||||+.... .
T Consensus 445 dL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~ 523 (633)
T PLN02738 445 DMKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPN 523 (633)
T ss_pred HHccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCcc
Confidence 999999999999999999999988 5588899999999999999999999999999999999999999999985321 1
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
.....+.|+|||.|+|.|+|++||.+|++++++.|+++|+|++.++. ++ +....+++..++.++.|.+++|
T Consensus 524 ~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~--~~--~~~~~~~~~~p~~~l~v~l~~R 594 (633)
T PLN02738 524 ETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA--PP--VKMTTGATIHTTEGLKMTVTRR 594 (633)
T ss_pred ccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC--CC--cccccceEEeeCCCcEEEEEEC
Confidence 12234579999999999999999999999999999999999987654 22 2222345555666888888877
No 23
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=1.7e-46 Score=335.12 Aligned_cols=219 Identities=25% Similarity=0.472 Sum_probs=186.8
Q ss_pred CcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC--CCCCC
Q 048189 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGG--NKGFV 95 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~--~~~~~ 95 (252)
.++|+++.+++...+ +..+++++|.+++.++++||++||+++++|++++|+.||++|+++++|++++++. ....+
T Consensus 242 ~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~ 318 (463)
T PLN02774 242 THTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPI 318 (463)
T ss_pred CcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCC
Confidence 357999999973211 2248999999999999999999999999999999999999999999999999863 13457
Q ss_pred ChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCC
Q 048189 96 NEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCI 175 (252)
Q Consensus 96 ~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~ 175 (252)
+.+++.++||++++++|++|++|+++. ..|.+.+|++++|+.||||+.|+++.+.+|+||++|+||++|+||||++.+.
T Consensus 319 ~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~ 397 (463)
T PLN02774 319 DWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL 397 (463)
T ss_pred CHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc
Confidence 889999999999999999999999986 5699999999999999999999999999999999999999999999996532
Q ss_pred CCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeec
Q 048189 176 DFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKY 250 (252)
Q Consensus 176 ~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (252)
. ....++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.. ... . ....|+.++.|++++
T Consensus 398 ~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~--~~~---~--~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 398 E---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK--LMK---F--PRVEAPNGLHIRVSP 462 (463)
T ss_pred C---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc--ccc---C--CCCCCCCCceEEeee
Confidence 1 123589999999999999999999999999999999999976542 111 1 122245678887764
No 24
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.8e-47 Score=325.91 Aligned_cols=208 Identities=30% Similarity=0.543 Sum_probs=189.4
Q ss_pred CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChhhhccchhHHHHHHhhhcCC
Q 048189 38 DLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ 117 (252)
Q Consensus 38 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~ 117 (252)
.++.+++..++++++.||+|||+.++.|++|+|++||+.|++|++|+.+++..++..++.+.+.++|||+|||+|++|++
T Consensus 311 ~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRly 390 (519)
T KOG0159|consen 311 ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLY 390 (519)
T ss_pred cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhcee
Confidence 37889999999999999999999999999999999999999999999999988677889999999999999999999999
Q ss_pred CCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcch
Q 048189 118 PTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGL 197 (252)
Q Consensus 118 p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~ 197 (252)
|.++. ..|...+|..++||.||+||.|.+..+.+.+||.+|++|++|.||||+.++. ....++.++|||.|+|+|+||
T Consensus 391 Pv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GR 468 (519)
T KOG0159|consen 391 PVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGR 468 (519)
T ss_pred ccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchH
Confidence 99988 6799999999999999999999999999999999999999999999999753 344678899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 198 NMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 198 ~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
.||++||-+++|.++++|+++..++. + +.....++..|..++.+++++|.
T Consensus 469 RiAElEl~llLarllr~f~V~~~~~~---p--v~~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 469 RIAELELHLLLARLLRNFKVEFLHEE---P--VEYVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred HHHHHHHHHHHHHHHHhcceeecCCC---C--ccceeEEEEcCCCCcceeeeeCC
Confidence 99999999999999999999987752 2 33344577777789999998874
No 25
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-46 Score=316.93 Aligned_cols=226 Identities=29% Similarity=0.568 Sum_probs=198.7
Q ss_pred CcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCCh
Q 048189 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 97 (252)
...|+++.+++ ...++ ...+++++.+.++.++|||..|++.+.+|++++|++|||++..+++|++.+++++....+.
T Consensus 251 ~~~dmlq~l~~-~y~dg--~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~ 327 (486)
T KOG0684|consen 251 WDNDMLQSLME-KYKDG--RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY 327 (486)
T ss_pred ccHHHHHHHHH-HhhcC--CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence 35699999998 33322 3589999999999999999999999999999999999999999999999999987777999
Q ss_pred hhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccC----eeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCC
Q 048189 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDG----YEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDS 173 (252)
Q Consensus 98 ~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~ 173 (252)
++++++|.|++||+|+|||+||.+. +.|.+.+|.++.+ |.||+|..|.++.+.+|+||++|++|+.|+|+||++.
T Consensus 328 d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~ 406 (486)
T KOG0684|consen 328 DQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD 406 (486)
T ss_pred HHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence 9999999999999999999998877 5599999999876 9999999999999999999999999999999999987
Q ss_pred CCCCC----CCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEee
Q 048189 174 CIDFK----GQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAK 249 (252)
Q Consensus 174 ~~~~~----~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (252)
+++-+ .-.+.+||||+|.|.|||+.||.+|+++++..+|+.|++++.++ +.+.+|++. .++-|..+++++.+
T Consensus 407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~---~v~~P~g~v~irYK 482 (486)
T KOG0684|consen 407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSR---MVMQPEGDVRIRYK 482 (486)
T ss_pred CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHH---hhcCCCCCceEEEe
Confidence 65431 12345699999999999999999999999999999999999997 334445442 36677889999988
Q ss_pred cc
Q 048189 250 YH 251 (252)
Q Consensus 250 ~r 251 (252)
.|
T Consensus 483 ~R 484 (486)
T KOG0684|consen 483 RR 484 (486)
T ss_pred ec
Confidence 87
No 26
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=5.5e-46 Score=330.95 Aligned_cols=216 Identities=25% Similarity=0.434 Sum_probs=188.7
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhc---CCCCCC
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIG---GNKGFV 95 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~ 95 (252)
++|+++.+++.. ...+++++++.+++++++||+|||+.+++|++++|+.||++|+++++|+.++.+ .....+
T Consensus 232 ~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~ 306 (452)
T PLN03141 232 PKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPL 306 (452)
T ss_pred hhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCC
Confidence 469999998653 124899999999999999999999999999999999999999999999998763 123457
Q ss_pred ChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCC
Q 048189 96 NEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCI 175 (252)
Q Consensus 96 ~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~ 175 (252)
+.+++.++||++|||+|++|++|+++. .+|.+.+|++++||.||+|+.|+++.+++|+|+++|+||++|+||||++.+.
T Consensus 307 ~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~ 385 (452)
T PLN03141 307 YWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM 385 (452)
T ss_pred CHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC
Confidence 888999999999999999999999875 6799999999999999999999999999999999999999999999997532
Q ss_pred CCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 176 DFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 176 ~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
.+..|+|||.|+|.|+|++||.+|++++++.|+++|+|+..++. . .. ..+..+..++.|.+++|+
T Consensus 386 ----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~---~~--~~~~~~~~~~~~~~~~~~ 450 (452)
T PLN03141 386 ----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---I---VN--FPTVRMKRKLPIWVTRID 450 (452)
T ss_pred ----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---e---ee--cccccCCCCceEEEEeCC
Confidence 34579999999999999999999999999999999999986542 1 11 135566678999999885
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=6.1e-45 Score=327.30 Aligned_cols=221 Identities=24% Similarity=0.394 Sum_probs=189.0
Q ss_pred CcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC---CCC
Q 048189 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGN---KGF 94 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~---~~~ 94 (252)
...|+++.+++...++ +..+++++++.+++.+++||++||+.+++|++++|++||++|+++++|++++++.. ...
T Consensus 264 ~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~ 341 (490)
T PLN02302 264 RKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKG 341 (490)
T ss_pred CcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 4579999999864332 23489999999999999999999999999999999999999999999999998642 123
Q ss_pred CChhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCC
Q 048189 95 VNEDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSC 174 (252)
Q Consensus 95 ~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~ 174 (252)
++.++++++||++++++|++|++|+.+. ..|.+.+|++++|+.||+|+.|.++.+++|+|+++|+||++|+|+||++..
T Consensus 342 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~ 420 (490)
T PLN02302 342 LTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT 420 (490)
T ss_pred CCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC
Confidence 6889999999999999999999999887 469999999999999999999999999999999999999999999999743
Q ss_pred CCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 175 IDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 175 ~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
.....++|||.|+|.|+|++||..|++++++.++++|+|++.+.. . ++. ......|..++.+++++|
T Consensus 421 ----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~--~~~--~~~~~~p~~~~~~~~~~~ 487 (490)
T PLN02302 421 ----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG--C--KVM--YLPHPRPKDNCLARITKV 487 (490)
T ss_pred ----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC--C--cce--eCCCCCCCCCceEEEEec
Confidence 234579999999999999999999999999999999999987532 1 222 122255566777877766
No 28
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=1.3e-44 Score=324.97 Aligned_cols=221 Identities=32% Similarity=0.588 Sum_probs=189.5
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCChh
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNED 98 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 98 (252)
..|+++.|++.. ..++.++|..+++.+++||++||+.+++|++++|++||++|+++++|++++++. ..++.+
T Consensus 260 ~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~--~~~~~~ 331 (489)
T PLN02936 260 DPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG--RPPTYE 331 (489)
T ss_pred chHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC--CCCCHH
Confidence 468999998642 137899999999999999999999999999999999999999999999999874 347889
Q ss_pred hhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCC--
Q 048189 99 DVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCID-- 176 (252)
Q Consensus 99 ~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~-- 176 (252)
+++++||++||++|++|++|+.+...+|.+..|+.++|+.||+|+.|+++.+.+|+||++|+||++|+|+||+..+..
T Consensus 332 ~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~ 411 (489)
T PLN02936 332 DIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPN 411 (489)
T ss_pred HHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCcc
Confidence 999999999999999999999888777777777878999999999999999999999999999999999999965321
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
.......++|||.|+|.|+|++||++|++++++.|+++|+|++.++. .+.. ..++...++.++.|++++|+
T Consensus 412 ~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~~~~~~~v~~~~R~ 482 (489)
T PLN02936 412 ETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIVM--TTGATIHTTNGLYMTVSRRR 482 (489)
T ss_pred ccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccce--ecceEEeeCCCeEEEEEeee
Confidence 12223579999999999999999999999999999999999987653 2222 22355556668888888874
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=4e-44 Score=319.95 Aligned_cols=219 Identities=22% Similarity=0.388 Sum_probs=189.7
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC--CCCCCC
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGG--NKGFVN 96 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~--~~~~~~ 96 (252)
.+|+++.+++.. .+++++++++.++.+++||++||+.+++|++++|+.||++|+++++|++++.+. +...++
T Consensus 249 ~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~ 322 (472)
T PLN02987 249 KKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLE 322 (472)
T ss_pred cccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCC
Confidence 579999999652 148999999999999999999999999999999999999999999999998752 134578
Q ss_pred hhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCC
Q 048189 97 EDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCID 176 (252)
Q Consensus 97 ~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~ 176 (252)
.+++.++||++|+++|++|++|+++. ..|.+.+|++++|+.||+|+.|+++.+.+|+|+++|++|++|+|+||++....
T Consensus 323 ~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~ 401 (472)
T PLN02987 323 WSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT 401 (472)
T ss_pred HHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC
Confidence 88999999999999999999999875 66999999999999999999999999999999999999999999999975332
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeeccC
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYHE 252 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 252 (252)
......++|||.|+|.|+|++||..|++++++.|+++|+|++.++. ++.+ ..+..|..++.+++++|+
T Consensus 402 -~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~----~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 402 -TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---KLVF----FPTTRTQKRYPINVKRRD 469 (472)
T ss_pred -CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---ceee----cccccCCCCceEEEEecc
Confidence 1233579999999999999999999999999999999999987653 2122 235556667888888874
No 30
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=3.6e-44 Score=320.07 Aligned_cols=215 Identities=23% Similarity=0.422 Sum_probs=185.9
Q ss_pred cchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC--CCCCC
Q 048189 19 PEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGN--KGFVN 96 (252)
Q Consensus 19 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~ 96 (252)
..|+++.+++. +.+++++++.++++++++||++||+.+++|++++|++||++|+++++|++++.+.. ...++
T Consensus 246 ~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~ 319 (463)
T PLN02196 246 HNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLT 319 (463)
T ss_pred cccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCC
Confidence 46899988852 12589999999999999999999999999999999999999999999999987632 34578
Q ss_pred hhhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCC
Q 048189 97 EDDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCID 176 (252)
Q Consensus 97 ~~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~ 176 (252)
.+++.++||++|+++|++|++|+.+.. .|.+.+|+.++||.||+|+.|+++.+.+|+|+++|+||++|+||||++..
T Consensus 320 ~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-- 396 (463)
T PLN02196 320 WEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-- 396 (463)
T ss_pred HHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC--
Confidence 899999999999999999999999885 49999999999999999999999999999999999999999999999632
Q ss_pred CCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccCCceeccccCceeeEeecc
Q 048189 177 FKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPGMKSQDLDFDVLPGITMHKKNALSLLAKYH 251 (252)
Q Consensus 177 ~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 251 (252)
....++|||.|+|.|+|+.+|++|++++++.|+++|+|++.+.. . ++. ...+..|+..+.|+++.+
T Consensus 397 ---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--~--~~~--~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 397 ---KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS--N--GIQ--YGPFALPQNGLPIALSRK 462 (463)
T ss_pred ---CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC--C--ceE--EcccccCCCCceEEEecC
Confidence 34579999999999999999999999999999999999987642 1 222 222334667877777654
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.9e-40 Score=288.80 Aligned_cols=175 Identities=37% Similarity=0.650 Sum_probs=162.6
Q ss_pred CcchHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCCh
Q 048189 18 QPEDIIDILLQIRKDRGFKVDLTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIGGNKGFVNE 97 (252)
Q Consensus 18 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 97 (252)
+..|+++.++....+++. .+++++|+++++.+++||+|||+.+++|+++.|++||+.++++++|.+.
T Consensus 213 ~~~dlls~l~~a~~~~~~--~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------- 279 (411)
T COG2124 213 PRDDLLSLLLSAEDDGGG--RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------- 279 (411)
T ss_pred CcccHHHHHHHHhhCCCC--cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------
Confidence 568899999988766532 5999999999999999999999999999999999999999999988542
Q ss_pred hhhccchhHHHHHHhhhcCCCCCCCCCcccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCC
Q 048189 98 DDVQELHYLKAVVKETMRLQPTVPLLVPRETIEKCVIDGYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDF 177 (252)
Q Consensus 98 ~~~~~~~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~ 177 (252)
||+.++++|++|++|+++. ..|.+++|++++|+.||+|+.|+++.+++|+||++|++|++|+|+||.
T Consensus 280 ------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------ 346 (411)
T COG2124 280 ------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------ 346 (411)
T ss_pred ------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------
Confidence 7899999999999999998 889999999999999999999999999999999999999999999997
Q ss_pred CCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceeecCCC
Q 048189 178 KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPPG 222 (252)
Q Consensus 178 ~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~ 222 (252)
..++|||+|.|.|+|..||++|++++++.++++|++....+
T Consensus 347 ----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~ 387 (411)
T COG2124 347 ----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE 387 (411)
T ss_pred ----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence 35899999999999999999999999999999999887665
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=3.6e-37 Score=274.49 Aligned_cols=182 Identities=21% Similarity=0.387 Sum_probs=157.5
Q ss_pred CCCHHHHHHHHHH-HHHhcchhhHHHHHHHHHHHhhChH-HHHHHHHHHHHHhcCCCCCCChhhhccchhHHHHHHhhhc
Q 048189 38 DLTLDHIKAVLMN-VFVAGTDTSAATVVWAMTYLMKNPR-AMKKVQQEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR 115 (252)
Q Consensus 38 ~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~l~~~p~-~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~l~a~i~E~lR 115 (252)
++++++++++++. +.++++++++.+++|++++|+.||+ ++++|++|++.+++...+.++.+++.++||++++++|++|
T Consensus 266 ~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLR 345 (480)
T PLN02648 266 GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALR 345 (480)
T ss_pred CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHh
Confidence 4999999999875 4466788888899999999999995 9999999999998643456899999999999999999999
Q ss_pred CCCCCCCCCccccccccccc----CeeeCCCCEEEecchhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccc----
Q 048189 116 LQPTVPLLVPRETIEKCVID----GYEIPAKTLVFVNAWAIGRDPEAWENPEEFYPERFVDSCIDFKGQHFELIPF---- 187 (252)
Q Consensus 116 l~p~~~~~~~r~~~~d~~i~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~Rfl~~~~~~~~~~~~~~~f---- 187 (252)
++|+++.. .|.+.+|+++. ||.||+|+.|+++.+.+|+||++|+||++|+|+||++.+.. ....+++|
T Consensus 346 l~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~ 421 (480)
T PLN02648 346 IEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGR 421 (480)
T ss_pred hcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCc
Confidence 99999884 47788999996 79999999999999999999999999999999999875322 11234444
Q ss_pred -----CCCCCCCcchHHHHHHHHHHHHHHHhhce-eecCCCC
Q 048189 188 -----GAGRRICPGLNMGIATVDLALANLLYKFD-WEMPPGM 223 (252)
Q Consensus 188 -----g~G~~~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~ 223 (252)
|.|+|.|+|++||++|++++++.|+++|+ |++.++.
T Consensus 422 ~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 422 ETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred ccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence 66779999999999999999999999998 9987654
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=53.72 E-value=5.7 Score=24.78 Aligned_cols=8 Identities=38% Similarity=0.746 Sum_probs=6.3
Q ss_pred CCCCCCCC
Q 048189 166 YPERFVDS 173 (252)
Q Consensus 166 ~p~Rfl~~ 173 (252)
||||||.-
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78899864
No 34
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=44.05 E-value=22 Score=26.27 Aligned_cols=23 Identities=13% Similarity=0.316 Sum_probs=17.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh
Q 048189 192 RICPGLNMGIATVDLALANLLYK 214 (252)
Q Consensus 192 ~~C~G~~~A~~e~~~~l~~ll~~ 214 (252)
..|.|+.||+.++-.+|..++..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 47999999999999999999874
No 35
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=41.84 E-value=12 Score=28.90 Aligned_cols=50 Identities=22% Similarity=0.451 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHh
Q 048189 163 EEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLY 213 (252)
Q Consensus 163 ~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~~~A~~e~~~~l~~ll~ 213 (252)
.+|||++|-+--......+...+-|..|+=.|-|.. ..-.++.++..++.
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK-s~ed~~~av~~~~~ 84 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK-SVEDVHRAVKKLAK 84 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC-cHHHHHHHHHHHHH
Confidence 467888885422222334557899999999999976 34444444444443
No 36
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=41.62 E-value=10 Score=29.35 Aligned_cols=36 Identities=19% Similarity=0.562 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCCCcchH
Q 048189 163 EEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGLN 198 (252)
Q Consensus 163 ~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~~ 198 (252)
-+|+|+||-.---.....+...+-|+.|+=.|.|-.
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGak 64 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGAK 64 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEccC
Confidence 478898886432222234456889999999999863
No 37
>PRK00394 transcription factor; Reviewed
Probab=35.14 E-value=16 Score=28.45 Aligned_cols=34 Identities=24% Similarity=0.604 Sum_probs=23.9
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCCCcc
Q 048189 163 EEFYPERFVDSCIDFKGQHFELIPFGAGRRICPG 196 (252)
Q Consensus 163 ~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G 196 (252)
-+|+|+||-+---......-..+-|..|+=.|.|
T Consensus 28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence 4788888865322223344568899999999998
No 38
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=30.84 E-value=73 Score=21.79 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 048189 61 ATVVWAMTYLMKNPRAMKKVQQEIRSLI 88 (252)
Q Consensus 61 ~~l~~~l~~l~~~p~~~~~l~~Ei~~~~ 88 (252)
.++.|.++..-.+|+-.+.|.+||+++-
T Consensus 54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 54 FTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 3678889999999999999999999874
No 39
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=30.06 E-value=40 Score=26.80 Aligned_cols=42 Identities=29% Similarity=0.328 Sum_probs=29.7
Q ss_pred chhHHHHHHhhhcCCCCCCCCCccc-ccccccccCeeeCCCCEEEe
Q 048189 103 LHYLKAVVKETMRLQPTVPLLVPRE-TIEKCVIDGYEIPAKTLVFV 147 (252)
Q Consensus 103 ~~~l~a~i~E~lRl~p~~~~~~~r~-~~~d~~i~g~~ip~g~~v~~ 147 (252)
-....|||.|..-+..... + |. ..+|+.++|..||+||.++.
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~--v-rlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSR--V-RLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCCE--E-EEEEcCceEECCEEeCCCCEEEE
Confidence 4456678888876654332 2 33 35678899999999998865
No 40
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=29.44 E-value=58 Score=20.15 Aligned_cols=19 Identities=26% Similarity=0.618 Sum_probs=16.1
Q ss_pred HHHHHHhhChHHHHHHHHH
Q 048189 65 WAMTYLMKNPRAMKKVQQE 83 (252)
Q Consensus 65 ~~l~~l~~~p~~~~~l~~E 83 (252)
-++.+|..||++.++|.+.
T Consensus 4 ~iV~YLv~nPevl~kl~~g 22 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEG 22 (57)
T ss_pred HHHHHHHHChHHHHHHHcC
Confidence 4678999999999999864
No 41
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=28.53 E-value=38 Score=22.81 Aligned_cols=21 Identities=24% Similarity=0.572 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhhceeecCCC
Q 048189 202 ATVDLALANLLYKFDWEMPPG 222 (252)
Q Consensus 202 ~e~~~~l~~ll~~f~~~~~~~ 222 (252)
..|+-++.++|+-|+|.+++-
T Consensus 60 ~~IrdAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVPM 80 (84)
T ss_pred HHHHHHHHHHhccCCceeeec
Confidence 457888999999999999864
No 42
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=27.89 E-value=28 Score=21.21 Aligned_cols=10 Identities=50% Similarity=1.089 Sum_probs=8.5
Q ss_pred ccCCCCCCCc
Q 048189 186 PFGAGRRICP 195 (252)
Q Consensus 186 ~fg~G~~~C~ 195 (252)
+||-|.|.|-
T Consensus 13 kfg~GsrsC~ 22 (56)
T KOG3506|consen 13 KFGQGSRSCR 22 (56)
T ss_pred ccCCCCccee
Confidence 6999999884
No 43
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=26.01 E-value=67 Score=24.11 Aligned_cols=41 Identities=17% Similarity=0.347 Sum_probs=26.3
Q ss_pred cccccccccCeeeCCCCEEEecchh-------hccCCCCCCCCCCCCCC
Q 048189 127 ETIEKCVIDGYEIPAKTLVFVNAWA-------IGRDPEAWENPEEFYPE 168 (252)
Q Consensus 127 ~~~~d~~i~g~~ip~g~~v~~~~~~-------~~~d~~~~~~p~~F~p~ 168 (252)
...+|+.++|..||+|++-++.... .+.+...|.. ..++|+
T Consensus 51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~ 98 (145)
T PF11138_consen 51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS 98 (145)
T ss_pred EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence 4567899999999999877654322 2455566654 334433
No 44
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=25.87 E-value=1.5e+02 Score=17.57 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHH
Q 048189 43 HIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEI 84 (252)
Q Consensus 43 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei 84 (252)
+++..+..++-.|.+-.+..+.--+...--||+....+-.|+
T Consensus 6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el 47 (48)
T PF12554_consen 6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL 47 (48)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 445555556666666666665555666666776665555443
No 45
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=25.43 E-value=29 Score=26.89 Aligned_cols=56 Identities=18% Similarity=0.370 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCCCcch---HHHHHHHHHHHHHHHhhceeec
Q 048189 163 EEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGL---NMGIATVDLALANLLYKFDWEM 219 (252)
Q Consensus 163 ~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~---~~A~~e~~~~l~~ll~~f~~~~ 219 (252)
-+|+|+||-.---.....+-..+-|+.|+=.|.|- .=|..-+.. ++.+|+++.+..
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitGaks~~~~~~a~~~-~~~~L~~~g~~~ 87 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITGAKSEEDAKLAARK-YARILQKLGFPV 87 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEecCCHHHHHHHHHH-HHHHHHHcCCCc
Confidence 47888888543222222345688999999999983 233333333 334455555443
No 46
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=24.95 E-value=2.2e+02 Score=18.99 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 048189 39 LTLDHIKAVLMNVFVAGTDTSAATVVWAMTYLMKNPRAMKKVQQEIRSLIG 89 (252)
Q Consensus 39 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~ 89 (252)
...+.........++--+..++..+.-.+.+.++||+...++.+.+.+.+.
T Consensus 29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~ 79 (87)
T PF14129_consen 29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE 79 (87)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 355666667778888999999999999999999999999999988876553
No 47
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=24.86 E-value=2e+02 Score=19.56 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=15.2
Q ss_pred ChHHHHHHHHHHHHHhcC
Q 048189 73 NPRAMKKVQQEIRSLIGG 90 (252)
Q Consensus 73 ~p~~~~~l~~Ei~~~~~~ 90 (252)
.|++...+++||-++++.
T Consensus 35 ~pd~l~~Lr~eIl~VI~K 52 (88)
T COG0851 35 QPDYLEQLRKEILEVISK 52 (88)
T ss_pred CcchHHHHHHHHHHHHHH
Confidence 488999999999998764
No 48
>PLN00062 TATA-box-binding protein; Provisional
Probab=24.44 E-value=28 Score=27.10 Aligned_cols=35 Identities=23% Similarity=0.610 Sum_probs=23.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCCCcch
Q 048189 163 EEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGL 197 (252)
Q Consensus 163 ~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~ 197 (252)
-+|+|++|-+---.....+...+-|+.|+=.|-|-
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGa 63 (179)
T PLN00062 29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 63 (179)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEec
Confidence 57888888543222222344688999999999984
No 49
>PRK06789 flagellar motor switch protein; Validated
Probab=22.72 E-value=79 Score=20.72 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=31.2
Q ss_pred HHHhhhcCCCCCCCCCccccccc--ccccCeeeCCCCEEEec
Q 048189 109 VVKETMRLQPTVPLLVPRETIEK--CVIDGYEIPAKTLVFVN 148 (252)
Q Consensus 109 ~i~E~lRl~p~~~~~~~r~~~~d--~~i~g~~ip~g~~v~~~ 148 (252)
-++|.+.+.+..-..+-+.+.++ +.++|..|.+|..|..+
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 47888999887766666777665 45689999999998876
No 50
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=22.61 E-value=55 Score=23.75 Aligned_cols=21 Identities=33% Similarity=0.265 Sum_probs=17.2
Q ss_pred cccccccccCeeeCCCCEEEe
Q 048189 127 ETIEKCVIDGYEIPAKTLVFV 147 (252)
Q Consensus 127 ~~~~d~~i~g~~ip~g~~v~~ 147 (252)
+...|.++.|..||+|++|+.
T Consensus 72 I~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 72 IAPEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred ecCCCcccCCeeecceEEEEE
Confidence 445688899999999999964
No 51
>PHA03162 hypothetical protein; Provisional
Probab=22.20 E-value=57 Score=23.87 Aligned_cols=24 Identities=21% Similarity=0.484 Sum_probs=18.7
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHH
Q 048189 188 GAGRRICPGLNMGIATVDLALANL 211 (252)
Q Consensus 188 g~G~~~C~G~~~A~~e~~~~l~~l 211 (252)
+.|.+.|||+...+-++..=|+.|
T Consensus 2 ~~~~k~~pk~~~tmEeLaaeL~kL 25 (135)
T PHA03162 2 AGGSKKCPKAQPTMEDLAAEIAKL 25 (135)
T ss_pred CCCcCCCCccCCCHHHHHHHHHHH
Confidence 458999999998888886655554
No 52
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=21.88 E-value=79 Score=22.97 Aligned_cols=22 Identities=36% Similarity=0.709 Sum_probs=16.5
Q ss_pred CCCCcchHHHHHHHHHHHHHHH
Q 048189 191 RRICPGLNMGIATVDLALANLL 212 (252)
Q Consensus 191 ~~~C~G~~~A~~e~~~~l~~ll 212 (252)
.|.|||-.++......++..+-
T Consensus 4 GH~Cpgl~~G~r~~~~a~~~l~ 25 (131)
T PF02663_consen 4 GHLCPGLALGYRMAKYALEELG 25 (131)
T ss_dssp SS--HHHHHHHHHHHHHHHHHT
T ss_pred CCcCccHHHHHHHHHHHHHHcC
Confidence 3899999999999888777763
No 53
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=20.07 E-value=38 Score=26.23 Aligned_cols=55 Identities=18% Similarity=0.439 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCCCcch-H--HHHHHHHHHHHHHHhhceee
Q 048189 163 EEFYPERFVDSCIDFKGQHFELIPFGAGRRICPGL-N--MGIATVDLALANLLYKFDWE 218 (252)
Q Consensus 163 ~~F~p~Rfl~~~~~~~~~~~~~~~fg~G~~~C~G~-~--~A~~e~~~~l~~ll~~f~~~ 218 (252)
.+|+|++|-+---.....+...+-|+.|+=.|-|- . =|..-++- ++.+|++..+.
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~-i~~~L~~~g~~ 86 (174)
T cd04516 29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTGAKSEDDSKLAARK-YARIIQKLGFP 86 (174)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHH-HHHHHHHcCCC
Confidence 57888888542212222344578899999999983 2 22222333 33445555543
Done!