BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048196
(115 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS 62
DMF ++PK DA+FMKWI H+WSD+HCLK LK Y+++P++GKVIV E ILP P++S +
Sbjct: 251 DMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLAT 310
Query: 63 KRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115
K +DV+M+ NP GK+RT+ EF LA GAGF G + N ++ +F K
Sbjct: 311 KGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 127 bits (318), Expect = 2e-30, Method: Composition-based stats.
Identities = 59/113 (52%), Positives = 74/113 (65%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS 62
DMF VPKGDAIF+KWI H+WSD+HCLKLLK Y ++P+ GKVIV E ILP P+ S +
Sbjct: 254 DMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIAT 313
Query: 63 KRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115
K D LM+ NP GK+RT+ EF LA +GF G + N +V +F K
Sbjct: 314 KVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 123 bits (308), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 73/113 (64%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS 62
DMF+ VP GD I MKWILH+WSD HC LLK Y ++P GKV++V+ ILP PE + S
Sbjct: 252 DMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSS 311
Query: 63 KRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115
+ +D++M+ NP G++R + EF LA GAGF+G + + N W +F K
Sbjct: 312 QGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS 62
DMF +VP+GDA+ +K + HNWSD+ C++ L +K++ +GKVI+VE ILPE P TS S
Sbjct: 260 DMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEES 319
Query: 63 KRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCN-LWVRDFYK 115
K S LD LM G++RT+ ++ L+ +GFS + N L V +FYK
Sbjct: 320 KLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 86.3 bits (212), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS 62
D F +VP+GDA +K + HNWSD+ C++ L +K++ +GKVI+VE ILPE P TS S
Sbjct: 260 DXFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEES 319
Query: 63 KRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCN-LWVRDFYK 115
K S LD L G++RT+ ++ L+ +GFS + N L V +FYK
Sbjct: 320 KLVSTLDNLXFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVXEFYK 372
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIP---EDGKVIVVESILPELPETS 59
DMF+++P DA+ +KW+LH+W+D+ LK+LK ++I +DGKVI+++ + E +
Sbjct: 240 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDR 299
Query: 60 TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRF 101
+++ D++M+T GK+RTK E+ L AGFS +
Sbjct: 300 GLTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKI 340
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIP---EDGKVIVVESILPELPETS 59
DMF+++P DA+ +KW+LH+W+D+ LK+LK ++I +DGKVI+++ + E +
Sbjct: 243 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDR 302
Query: 60 TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRF 101
+++ D++M+T GK+RTK E+ L AGFS +
Sbjct: 303 GLTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKI 343
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIP---EDGKVIVVESILPELPETS 59
DMF+++P DA+ +KW+LH+W+D+ LK+LK ++I +DGKVI+++ + E +
Sbjct: 244 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDR 303
Query: 60 TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRF 101
+++ D++M+T GK+RTK E+ L AGFS +
Sbjct: 304 GLTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKI 344
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPED---GKVIVVESILPELPETS 59
DMF ++P DA+ +K+ILHNW+D CL++LK +++ D GKV +++ ++ + + +
Sbjct: 239 DMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDEN 298
Query: 60 TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFY 114
V++ +DV M N GK+R + E+ L AGF + T L + + Y
Sbjct: 299 QVTQIKLLMDVNMACLN--GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPED---GKVIVVESILPELPETS 59
DMF +VPK DA+ +K +LH+W+D C+K+LK +++ D GKVIV++ ++ E + +
Sbjct: 244 DMFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDEN 303
Query: 60 TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFY 114
+++ ++V + N GK+R + E+ L AGF + FT + + + Y
Sbjct: 304 QLTQIKLLMNVTISCVN--GKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIY 356
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPED---GKVIVVESILPELPETS 59
D F ++P DA+ +K+ILHNW+D CL++LK +++ D GKV +++ ++ + + +
Sbjct: 239 DXFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDEN 298
Query: 60 TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFY 114
V++ DV N GK+R + E+ L AGF + T L + + Y
Sbjct: 299 QVTQIKLLXDVNXACLN--GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 3 DMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS 62
D + VP D +K ILHNW D+ +++L + P G+V+V+++++PE +
Sbjct: 240 DFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVXPAHGRVLVIDAVVPE----GNDA 295
Query: 63 KRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGF 96
++ + D + +G++RT E L T AG
Sbjct: 296 HQSKEXDFXXLAAR-TGQERTAAELEPLFTAAGL 328
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 3 DMFQN-VPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV 61
D F++ +P+ D + +LH+W+D C LL+ Y + G ++V+ES+L E +
Sbjct: 236 DFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL 295
Query: 62 SKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFE 102
++ S L++L+ T+ G++RT + L + AGF +F+
Sbjct: 296 TQLYS-LNMLVQTE---GQERTPTHYHMLLSSAGFRDFQFK 332
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 3 DMFQNVPKG-DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV 61
D F+ +P G D +K +LH+W DD +++L+ + D +++V+++++ E P ST+
Sbjct: 260 DFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRLLVIDNLIDERPAASTL 319
Query: 62 SKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTR 100
G +R++ EF L +G R
Sbjct: 320 FVDLLL------LVLVGGAERSESEFAALLEKSGLRVER 352
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 3 DMFQNVP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV 61
D F+ +P D + + ++L NWSD+ L +L+ +++ G+++V++ ++
Sbjct: 240 DFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR--ADVEGDGAD 297
Query: 62 SKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFS 97
++ LD+ M+T G+ RT+ E + LA AG +
Sbjct: 298 RFFSTLLDLRMLTFM-GGRVRTRDEVVDLAGSAGLA 332
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 3 DMFQNVP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV 61
D F+ +P K DAI + ++L NW D +++L +++ G++++ E +L E S
Sbjct: 241 DFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER--DDLHENS-F 297
Query: 62 SKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGF 96
+++ ++LD+ M+ G RT+ ++ LA AG
Sbjct: 298 NEQFTELDLRMLV-FLGGALRTREKWDGLAASAGL 331
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 3 DMFQNVP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV 61
D F+ +P D + + ++L NWSD+ L +L+ +++ G+++V++ ++
Sbjct: 240 DFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR--ADVEGDGAD 297
Query: 62 SKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFS 97
++ LD+ +T G+ RT+ E + LA AG +
Sbjct: 298 RFFSTLLDLRXLTFX-GGRVRTRDEVVDLAGSAGLA 332
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 3 DMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV 61
DM Q VP GD + I+ + + L+LL +++ DG+V+V+E + S
Sbjct: 225 DMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTI----SASEP 280
Query: 62 SKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRF 101
S + DV + +G+ RT E + L GF+ R
Sbjct: 281 SPMSVLWDVHLFMAC-AGRHRTTEEVVDLLGRGGFAVERI 319
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 5 FQNVPKGDAIF-MKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSK 63
F +P G + + +LH+W D + +L+ ++ G V+V+E++ +
Sbjct: 229 FDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD-------EH 281
Query: 64 RNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFS 97
+ +D+ M+T GK+R+ E LA AG +
Sbjct: 282 AGTGMDLRMLTYF-GGKERSLAELGELAAQAGLA 314
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 12 DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRN-SQLDV 70
D + + LH++ C +LL+ ++ +GKVIV + I P + ++ + + +
Sbjct: 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFI----PNSDRITPPDAAAFSL 289
Query: 71 LMMTQNPSGKKRTKHEFLTLATGAGFSGTRF 101
+ + P+G T E+ + + AGFS ++
Sbjct: 290 VXLATTPNGDAYTFAEYESXFSNAGFSHSQL 320
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 PKG-DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESI 51
P G DA++M L +S++ + +L +SI +D KV ++E++
Sbjct: 246 PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|B Chain B, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|C Chain C, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|D Chain D, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
Length = 356
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 14/60 (23%)
Query: 58 TSTVSKRNSQLDVLM--------------MTQNPSGKKRTKHEFLTLATGAGFSGTRFEW 103
T TV +RN + L+ M NP+ +K + +A GF G +W
Sbjct: 57 TQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDW 116
>pdb|2EX4|A Chain A, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
pdb|2EX4|B Chain B, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
Length = 241
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/43 (20%), Positives = 26/43 (60%)
Query: 12 DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPE 54
D I+++W++ + +D H + L+ S+ +G +++ +++ E
Sbjct: 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE 190
>pdb|3OG4|B Chain B, The Crystal Structure Of Human Interferon Lambda 1
Complexed With Its High Affinity Receptor In Space Group
P21212
pdb|3OG6|B Chain B, The Crystal Structure Of Human Interferon Lambda 1
Complexed With Its High Affinity Receptor In Space Group
P212121
Length = 226
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 4 MFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETST 60
+F P G + + + S+ HCL IY S+P+ K L E+PE +
Sbjct: 154 LFPVTPHGQPVQIT-LQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANA 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,875,054
Number of Sequences: 62578
Number of extensions: 140058
Number of successful extensions: 463
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 28
length of query: 115
length of database: 14,973,337
effective HSP length: 78
effective length of query: 37
effective length of database: 10,092,253
effective search space: 373413361
effective search space used: 373413361
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)