Query 048196
Match_columns 115
No_of_seqs 139 out of 1112
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:29:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 8.2E-31 2.8E-35 187.4 11.8 111 1-115 234-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 1.5E-26 5E-31 166.0 12.9 115 1-115 250-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 8.7E-26 3E-30 162.1 12.8 115 1-115 252-366 (368)
4 3lst_A CALO1 methyltransferase 99.9 6E-23 2E-27 146.2 11.6 109 2-115 239-347 (348)
5 1zg3_A Isoflavanone 4'-O-methy 99.9 8.4E-23 2.9E-27 145.8 11.0 114 1-115 242-358 (358)
6 3gwz_A MMCR; methyltransferase 99.9 1.2E-22 4.3E-27 145.6 10.7 108 2-115 259-368 (369)
7 3i53_A O-methyltransferase; CO 99.9 1.1E-22 3.8E-27 143.7 10.1 105 2-115 226-331 (332)
8 1fp2_A Isoflavone O-methyltran 99.9 5.5E-22 1.9E-26 141.3 11.5 112 2-115 238-352 (352)
9 1fp1_D Isoliquiritigenin 2'-O- 99.9 3.2E-22 1.1E-26 143.5 9.6 113 2-115 259-372 (372)
10 2ip2_A Probable phenazine-spec 99.9 7.3E-22 2.5E-26 139.4 11.0 109 2-115 224-333 (334)
11 3dp7_A SAM-dependent methyltra 99.8 8.8E-21 3E-25 135.7 9.0 114 1-115 235-354 (363)
12 3mcz_A O-methyltransferase; ad 99.8 2E-20 6.7E-25 132.9 10.1 110 1-115 235-348 (352)
13 2r3s_A Uncharacterized protein 99.8 1.9E-19 6.4E-24 126.9 9.7 110 2-114 222-333 (335)
14 1tw3_A COMT, carminomycin 4-O- 99.8 6.8E-20 2.3E-24 130.5 7.4 109 2-115 240-355 (360)
15 1x19_A CRTF-related protein; m 99.8 5.4E-19 1.8E-23 126.0 11.9 107 2-115 247-358 (359)
16 1qzz_A RDMB, aclacinomycin-10- 99.8 1.5E-19 5.1E-24 129.2 7.5 109 2-115 239-355 (374)
17 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.5E-13 5.3E-18 94.5 8.8 113 2-115 130-256 (261)
18 3dtn_A Putative methyltransfer 99.4 1.1E-12 3.9E-17 87.8 9.4 112 2-115 99-225 (234)
19 3hnr_A Probable methyltransfer 99.3 9.9E-12 3.4E-16 82.3 8.1 113 2-115 96-211 (220)
20 3dh0_A SAM dependent methyltra 99.3 3E-11 1E-15 79.9 10.3 95 2-115 95-192 (219)
21 3ou2_A SAM-dependent methyltra 99.3 3.8E-11 1.3E-15 79.2 9.1 99 2-103 97-204 (218)
22 3pfg_A N-methyltransferase; N, 99.2 1.5E-11 5E-16 83.8 6.5 114 2-115 100-248 (263)
23 3bxo_A N,N-dimethyltransferase 99.2 1.5E-11 5.1E-16 82.2 6.3 114 2-115 90-238 (239)
24 1xtp_A LMAJ004091AAA; SGPP, st 99.2 6.5E-11 2.2E-15 79.9 8.5 90 2-105 147-239 (254)
25 3h2b_A SAM-dependent methyltra 99.2 6.5E-11 2.2E-15 77.6 8.3 97 2-112 91-191 (203)
26 2ex4_A Adrenal gland protein A 99.2 1E-10 3.5E-15 78.7 8.7 89 2-105 135-226 (241)
27 3dlc_A Putative S-adenosyl-L-m 99.2 4.9E-12 1.7E-16 83.3 2.1 109 2-113 100-212 (219)
28 3ujc_A Phosphoethanolamine N-m 99.2 8.7E-11 3E-15 79.6 7.5 95 2-104 109-206 (266)
29 1ve3_A Hypothetical protein PH 99.2 3.6E-11 1.2E-15 79.8 5.3 113 2-115 92-226 (227)
30 2o57_A Putative sarcosine dime 99.1 1.8E-10 6.2E-15 79.6 8.4 93 2-104 139-234 (297)
31 1kpg_A CFA synthase;, cyclopro 99.1 3.7E-10 1.3E-14 77.7 9.8 102 2-104 121-228 (287)
32 1vl5_A Unknown conserved prote 99.1 1.5E-10 5E-15 78.7 7.6 96 2-104 92-190 (260)
33 3lcc_A Putative methyl chlorid 99.1 2.3E-10 7.8E-15 76.6 8.0 85 2-105 122-208 (235)
34 3ocj_A Putative exported prote 99.1 4.5E-10 1.5E-14 78.2 9.6 114 2-115 177-303 (305)
35 3bus_A REBM, methyltransferase 99.1 2.5E-10 8.5E-15 77.9 7.8 96 2-104 118-216 (273)
36 3g2m_A PCZA361.24; SAM-depende 99.1 2.2E-10 7.5E-15 79.5 7.6 114 2-115 140-291 (299)
37 1xxl_A YCGJ protein; structura 99.1 2.6E-10 8.8E-15 76.8 7.2 96 2-104 76-174 (239)
38 3e23_A Uncharacterized protein 99.1 5.2E-10 1.8E-14 73.7 7.6 88 2-104 92-182 (211)
39 3sm3_A SAM-dependent methyltra 99.1 2.9E-10 9.8E-15 75.6 6.2 100 2-104 90-207 (235)
40 3i9f_A Putative type 11 methyl 99.0 6.3E-10 2.1E-14 70.9 7.2 83 11-114 76-158 (170)
41 3l8d_A Methyltransferase; stru 99.0 1.3E-09 4.5E-14 72.9 8.6 93 2-104 105-200 (242)
42 2fk8_A Methoxy mycolic acid sy 99.0 1.3E-09 4.4E-14 76.1 8.7 94 11-104 156-254 (318)
43 3d2l_A SAM-dependent methyltra 99.0 3.9E-09 1.3E-13 70.5 9.5 114 2-115 86-242 (243)
44 3vc1_A Geranyl diphosphate 2-C 99.0 1.6E-09 5.6E-14 75.6 7.9 93 2-104 174-269 (312)
45 3dli_A Methyltransferase; PSI- 99.0 2.6E-09 9E-14 71.7 8.6 84 11-105 102-185 (240)
46 1y8c_A S-adenosylmethionine-de 99.0 1.6E-09 5.3E-14 72.5 7.0 114 2-115 91-244 (246)
47 2zfu_A Nucleomethylin, cerebra 99.0 1.4E-09 4.8E-14 71.8 6.8 84 2-115 104-190 (215)
48 1nkv_A Hypothetical protein YJ 99.0 2.2E-09 7.6E-14 72.4 7.9 93 2-104 93-187 (256)
49 2qe6_A Uncharacterized protein 99.0 1.2E-09 3.9E-14 75.5 6.5 82 10-100 157-238 (274)
50 3mgg_A Methyltransferase; NYSG 99.0 7.5E-10 2.6E-14 75.7 5.4 98 2-104 94-198 (276)
51 2p7i_A Hypothetical protein; p 99.0 1.7E-09 5.9E-14 72.2 7.1 101 2-104 93-199 (250)
52 4fsd_A Arsenic methyltransfera 99.0 2.2E-09 7.4E-14 77.2 7.7 84 11-103 167-250 (383)
53 3hem_A Cyclopropane-fatty-acyl 98.9 5.9E-09 2E-13 72.3 8.9 95 11-105 138-244 (302)
54 1vlm_A SAM-dependent methyltra 98.9 4.3E-09 1.5E-13 69.8 7.5 95 2-104 91-188 (219)
55 3f4k_A Putative methyltransfer 98.9 3E-09 1E-13 71.8 6.5 92 2-105 103-197 (257)
56 3bkw_A MLL3908 protein, S-aden 98.9 6.7E-09 2.3E-13 69.4 7.9 101 2-104 96-214 (243)
57 2p8j_A S-adenosylmethionine-de 98.9 3.3E-09 1.1E-13 69.5 6.1 99 2-101 78-180 (209)
58 2a14_A Indolethylamine N-methy 98.9 5.6E-09 1.9E-13 71.4 7.4 80 11-104 157-238 (263)
59 3g5l_A Putative S-adenosylmeth 98.9 3.9E-09 1.3E-13 71.2 6.5 100 2-104 97-216 (253)
60 2ld4_A Anamorsin; methyltransf 98.9 3.7E-09 1.3E-13 67.8 6.1 64 11-96 64-128 (176)
61 3kkz_A Uncharacterized protein 98.8 5E-09 1.7E-13 71.4 6.1 92 2-105 103-197 (267)
62 3e8s_A Putative SAM dependent 98.8 9E-09 3.1E-13 67.9 6.9 88 11-104 117-209 (227)
63 2xvm_A Tellurite resistance pr 98.8 1.2E-08 4.2E-13 66.1 7.0 84 2-103 87-172 (199)
64 3cgg_A SAM-dependent methyltra 98.8 3.2E-08 1.1E-12 63.7 8.6 76 2-104 96-175 (195)
65 4htf_A S-adenosylmethionine-de 98.8 3.2E-09 1.1E-13 73.0 3.9 102 2-105 124-233 (285)
66 2aot_A HMT, histamine N-methyl 98.8 1.1E-08 3.9E-13 70.7 6.4 83 11-101 136-218 (292)
67 1pjz_A Thiopurine S-methyltran 98.8 9.8E-09 3.3E-13 67.7 5.8 84 2-104 89-176 (203)
68 3cc8_A Putative methyltransfer 98.8 9.9E-09 3.4E-13 67.8 5.3 88 11-104 94-185 (230)
69 1ri5_A MRNA capping enzyme; me 98.8 3.4E-08 1.2E-12 67.8 8.2 103 2-104 121-250 (298)
70 2i62_A Nicotinamide N-methyltr 98.7 4E-08 1.4E-12 66.4 8.0 81 11-105 158-240 (265)
71 3gu3_A Methyltransferase; alph 98.7 8.9E-09 3E-13 71.0 4.6 98 2-103 79-189 (284)
72 3ege_A Putative methyltransfer 98.7 3.5E-08 1.2E-12 67.1 7.5 93 2-104 83-178 (261)
73 3ccf_A Cyclopropane-fatty-acyl 98.7 1.4E-08 4.9E-13 69.6 5.3 99 2-104 107-210 (279)
74 2yqz_A Hypothetical protein TT 98.7 1.7E-08 5.8E-13 68.1 5.1 96 2-102 93-194 (263)
75 3bkx_A SAM-dependent methyltra 98.7 8.1E-08 2.8E-12 65.4 8.0 91 11-104 123-219 (275)
76 3jwh_A HEN1; methyltransferase 98.7 1.2E-07 4.1E-12 62.6 8.1 81 11-99 103-187 (217)
77 3jwg_A HEN1, methyltransferase 98.7 1.2E-07 4.2E-12 62.5 8.1 91 2-100 91-188 (219)
78 2g72_A Phenylethanolamine N-me 98.6 3.8E-08 1.3E-12 67.8 5.6 80 11-104 175-256 (289)
79 4e2x_A TCAB9; kijanose, tetron 98.6 7.7E-08 2.6E-12 69.5 7.1 83 11-105 172-254 (416)
80 3ggd_A SAM-dependent methyltra 98.6 1E-08 3.4E-13 68.9 2.2 88 11-103 125-218 (245)
81 2p35_A Trans-aconitate 2-methy 98.6 7E-08 2.4E-12 65.0 5.7 94 2-98 85-184 (259)
82 3thr_A Glycine N-methyltransfe 98.6 3E-08 1E-12 68.2 3.0 40 11-50 131-176 (293)
83 2gb4_A Thiopurine S-methyltran 98.6 2.5E-07 8.4E-12 63.1 7.4 84 2-104 140-227 (252)
84 2kw5_A SLR1183 protein; struct 98.5 8.1E-07 2.8E-11 57.8 9.3 86 2-104 83-171 (202)
85 3giw_A Protein of unknown func 98.5 2E-07 6.8E-12 64.6 5.9 80 13-100 163-243 (277)
86 3m70_A Tellurite resistance pr 98.5 6.6E-07 2.2E-11 61.4 7.8 82 2-101 174-257 (286)
87 2gs9_A Hypothetical protein TT 98.4 4.6E-07 1.6E-11 59.4 6.2 84 2-95 84-171 (211)
88 1wzn_A SAM-dependent methyltra 98.3 4.2E-06 1.4E-10 56.1 9.1 47 2-48 95-144 (252)
89 3g07_A 7SK snRNA methylphospha 98.3 5.9E-08 2E-12 67.2 -0.0 86 11-104 178-269 (292)
90 3grz_A L11 mtase, ribosomal pr 98.3 9.2E-07 3.1E-11 57.8 4.9 80 2-115 116-196 (205)
91 1af7_A Chemotaxis receptor met 98.2 9.2E-07 3.1E-11 61.2 4.4 46 2-47 201-250 (274)
92 2vdw_A Vaccinia virus capping 98.2 3.6E-06 1.2E-10 58.8 6.1 94 11-104 130-246 (302)
93 3bgv_A MRNA CAP guanine-N7 met 98.1 9.8E-06 3.4E-10 56.3 6.4 94 11-104 115-232 (313)
94 3g5t_A Trans-aconitate 3-methy 98.1 3.2E-06 1.1E-10 58.4 3.8 82 11-97 114-197 (299)
95 3q87_B N6 adenine specific DNA 98.0 5E-05 1.7E-09 48.4 8.9 81 2-112 68-158 (170)
96 1fbn_A MJ fibrillarin homologu 98.0 1.7E-05 5.9E-10 52.8 7.0 80 11-115 144-227 (230)
97 3ofk_A Nodulation protein S; N 98.0 6E-06 2.1E-10 54.1 4.5 49 2-50 104-155 (216)
98 4hg2_A Methyltransferase type 97.9 1.4E-05 4.8E-10 54.6 4.8 49 2-53 88-139 (257)
99 2b3t_A Protein methyltransfera 97.9 0.0001 3.4E-09 50.4 8.8 84 2-115 166-275 (276)
100 1dus_A MJ0882; hypothetical pr 97.9 3.9E-05 1.3E-09 48.9 6.4 83 2-115 109-193 (194)
101 3b5i_A S-adenosyl-L-methionine 97.7 0.0003 1E-08 50.6 8.7 102 1-103 138-297 (374)
102 3uwp_A Histone-lysine N-methyl 97.7 3.2E-05 1.1E-09 56.5 3.6 52 2-56 239-295 (438)
103 3htx_A HEN1; HEN1, small RNA m 97.6 0.00037 1.3E-08 55.0 9.5 102 2-105 785-898 (950)
104 2pxx_A Uncharacterized protein 97.6 3.4E-05 1.1E-09 50.1 2.9 51 2-52 96-162 (215)
105 3e05_A Precorrin-6Y C5,15-meth 97.6 0.00034 1.2E-08 45.4 7.5 61 2-96 97-160 (204)
106 3mq2_A 16S rRNA methyltransfer 97.5 7.9E-05 2.7E-09 48.9 3.7 90 2-104 88-184 (218)
107 1g8a_A Fibrillarin-like PRE-rR 97.5 0.00055 1.9E-08 45.1 7.8 80 11-115 144-226 (227)
108 4df3_A Fibrillarin-like rRNA/T 97.5 0.00015 5.1E-09 49.0 5.0 79 11-113 148-229 (233)
109 2ipx_A RRNA 2'-O-methyltransfe 97.5 0.00018 6.2E-09 47.8 5.3 80 11-114 148-230 (233)
110 2nxc_A L11 mtase, ribosomal pr 97.5 0.00012 4.1E-09 49.6 4.5 62 11-106 185-246 (254)
111 2avn_A Ubiquinone/menaquinone 97.5 5.8E-05 2E-09 51.0 2.7 49 2-51 103-154 (260)
112 3iv6_A Putative Zn-dependent a 97.5 0.00016 5.5E-09 49.6 4.8 39 11-50 111-149 (261)
113 3evz_A Methyltransferase; NYSG 97.4 0.00052 1.8E-08 45.2 7.0 84 2-113 111-217 (230)
114 1zx0_A Guanidinoacetate N-meth 97.4 2.6E-05 8.9E-10 52.0 0.3 73 11-98 129-204 (236)
115 1m6e_X S-adenosyl-L-methionnin 97.4 0.0018 6.2E-08 46.3 9.7 101 1-101 127-277 (359)
116 2efj_A 3,7-dimethylxanthine me 97.3 0.00069 2.3E-08 48.9 7.0 102 1-102 137-290 (384)
117 2pjd_A Ribosomal RNA small sub 97.3 0.00016 5.6E-09 51.0 3.5 49 2-50 252-304 (343)
118 3hp7_A Hemolysin, putative; st 97.2 0.00037 1.3E-08 48.5 4.7 81 11-104 152-232 (291)
119 3hm2_A Precorrin-6Y C5,15-meth 97.1 0.00048 1.6E-08 43.4 4.1 34 11-50 95-128 (178)
120 1l3i_A Precorrin-6Y methyltran 97.1 0.00079 2.7E-08 42.6 4.9 54 11-98 101-154 (192)
121 3orh_A Guanidinoacetate N-meth 97.1 1.7E-05 5.7E-10 53.3 -3.3 73 12-101 130-207 (236)
122 3p2e_A 16S rRNA methylase; met 97.1 0.00092 3.1E-08 44.5 5.3 85 12-105 96-186 (225)
123 1o9g_A RRNA methyltransferase; 97.0 0.0017 5.8E-08 43.5 6.3 49 2-50 152-215 (250)
124 3m33_A Uncharacterized protein 97.0 9.6E-05 3.3E-09 48.9 0.1 64 2-103 98-166 (226)
125 4dzr_A Protein-(glutamine-N5) 97.0 0.00085 2.9E-08 43.3 4.5 56 29-113 144-202 (215)
126 3bwc_A Spermidine synthase; SA 96.9 0.0021 7.3E-08 44.6 6.2 69 11-104 170-240 (304)
127 3lcv_B Sisomicin-gentamicin re 96.9 0.0012 4.1E-08 45.6 4.6 82 2-106 188-273 (281)
128 3lpm_A Putative methyltransfer 96.9 0.0043 1.5E-07 41.8 7.3 59 27-115 154-218 (259)
129 2h00_A Methyltransferase 10 do 96.9 2.9E-05 1E-09 52.2 -3.7 85 11-104 141-238 (254)
130 1ej0_A FTSJ; methyltransferase 96.8 0.0013 4.4E-08 40.9 3.9 41 11-51 89-138 (180)
131 3opn_A Putative hemolysin; str 96.8 0.001 3.4E-08 44.7 3.4 67 29-104 117-184 (232)
132 2y1w_A Histone-arginine methyl 96.7 0.00049 1.7E-08 48.7 1.6 47 2-48 106-154 (348)
133 4dcm_A Ribosomal RNA large sub 96.7 0.001 3.6E-08 47.6 3.3 48 2-49 282-334 (375)
134 3eey_A Putative rRNA methylase 96.7 0.0022 7.7E-08 41.1 4.6 41 11-51 94-141 (197)
135 3fzg_A 16S rRNA methylase; met 96.6 0.0011 3.7E-08 43.7 2.7 37 11-49 116-152 (200)
136 3id6_C Fibrillarin-like rRNA/T 96.6 0.0052 1.8E-07 41.3 6.1 80 11-114 147-229 (232)
137 3mb5_A SAM-dependent methyltra 96.6 0.0019 6.5E-08 43.1 3.7 66 2-103 152-221 (255)
138 3b3j_A Histone-arginine methyl 96.5 0.00061 2.1E-08 50.4 1.0 46 2-47 214-261 (480)
139 1nt2_A Fibrillarin-like PRE-rR 96.5 0.0071 2.4E-07 39.7 6.0 80 11-115 127-209 (210)
140 3dmg_A Probable ribosomal RNA 96.5 0.0028 9.6E-08 45.5 4.2 48 2-49 287-340 (381)
141 2xyq_A Putative 2'-O-methyl tr 96.4 0.004 1.4E-07 43.3 4.7 48 2-49 113-171 (290)
142 1rjd_A PPM1P, carboxy methyl t 96.4 0.012 4E-07 41.7 7.1 84 12-97 196-281 (334)
143 3mti_A RRNA methylase; SAM-dep 96.3 0.0047 1.6E-07 39.1 4.3 73 11-104 90-169 (185)
144 2qm3_A Predicted methyltransfe 96.2 0.0086 2.9E-07 42.7 5.5 48 2-52 228-280 (373)
145 2frn_A Hypothetical protein PH 96.2 0.029 9.8E-07 38.3 7.8 70 2-100 182-253 (278)
146 3iei_A Leucine carboxyl methyl 96.1 0.031 1.1E-06 39.6 7.7 88 12-104 193-281 (334)
147 1u2z_A Histone-lysine N-methyl 96.0 0.0073 2.5E-07 44.2 4.4 42 11-55 324-365 (433)
148 3fpf_A Mtnas, putative unchara 95.9 0.0082 2.8E-07 41.9 4.0 42 2-49 179-222 (298)
149 3sso_A Methyltransferase; macr 95.8 0.0029 9.8E-08 46.1 1.4 38 11-51 289-326 (419)
150 1o54_A SAM-dependent O-methylt 95.8 0.0055 1.9E-07 41.6 2.7 41 2-49 171-213 (277)
151 2p41_A Type II methyltransfera 95.8 0.018 6.1E-07 40.1 5.3 45 3-47 140-189 (305)
152 2plw_A Ribosomal RNA methyltra 95.7 0.013 4.4E-07 37.5 4.1 39 11-49 107-154 (201)
153 3lbf_A Protein-L-isoaspartate 95.6 0.0048 1.7E-07 39.9 1.9 41 2-50 132-175 (210)
154 2yxe_A Protein-L-isoaspartate 95.6 0.0059 2E-07 39.6 2.3 40 2-49 135-177 (215)
155 3p9n_A Possible methyltransfer 95.5 0.051 1.7E-06 34.5 6.5 42 11-53 114-157 (189)
156 3njr_A Precorrin-6Y methylase; 95.5 0.028 9.5E-07 36.5 5.2 64 2-101 111-177 (204)
157 3bzb_A Uncharacterized protein 95.4 0.019 6.5E-07 39.2 4.4 36 11-48 164-204 (281)
158 3duw_A OMT, O-methyltransferas 95.4 0.039 1.3E-06 35.9 5.7 38 11-53 134-171 (223)
159 3q7e_A Protein arginine N-meth 95.4 0.0076 2.6E-07 42.6 2.2 46 2-47 122-171 (349)
160 3kr9_A SAM-dependent methyltra 95.3 0.12 4.2E-06 34.4 7.9 78 2-114 73-156 (225)
161 1yb2_A Hypothetical protein TA 95.3 0.0086 2.9E-07 40.7 2.2 41 2-49 169-211 (275)
162 2yxd_A Probable cobalt-precorr 95.2 0.019 6.4E-07 35.8 3.6 63 2-101 90-154 (183)
163 3r0q_C Probable protein argini 95.2 0.0059 2E-07 43.6 1.3 50 2-51 119-171 (376)
164 2vz8_A Fatty acid synthase; tr 95.2 0.0066 2.2E-07 52.8 1.8 82 11-102 1312-1393(2512)
165 1vbf_A 231AA long hypothetical 95.2 0.011 3.7E-07 38.8 2.5 41 2-50 123-166 (231)
166 2zwa_A Leucine carboxyl methyl 95.1 0.19 6.4E-06 38.6 9.5 88 12-103 219-308 (695)
167 3frh_A 16S rRNA methylase; met 95.1 0.057 2E-06 36.8 5.8 47 2-49 158-206 (253)
168 1xdz_A Methyltransferase GIDB; 95.1 0.023 7.9E-07 37.7 3.8 61 11-104 142-202 (240)
169 3r3h_A O-methyltransferase, SA 94.8 0.062 2.1E-06 35.9 5.4 39 11-54 137-175 (242)
170 1yzh_A TRNA (guanine-N(7)-)-me 94.8 0.061 2.1E-06 34.8 5.2 47 2-48 98-155 (214)
171 2pwy_A TRNA (adenine-N(1)-)-me 94.7 0.0099 3.4E-07 39.5 1.3 41 2-49 155-198 (258)
172 1jg1_A PIMT;, protein-L-isoasp 94.6 0.017 5.9E-07 38.1 2.2 40 2-49 147-189 (235)
173 1r18_A Protein-L-isoaspartate( 94.6 0.018 6.1E-07 37.8 2.3 39 2-48 152-193 (227)
174 1p91_A Ribosomal RNA large sub 94.5 0.036 1.2E-06 37.1 3.8 42 2-52 137-181 (269)
175 1g6q_1 HnRNP arginine N-methyl 94.5 0.019 6.4E-07 40.2 2.4 46 2-47 94-143 (328)
176 2fyt_A Protein arginine N-meth 94.5 0.031 1.1E-06 39.3 3.4 45 2-46 120-168 (340)
177 2nyu_A Putative ribosomal RNA 94.4 0.017 5.7E-07 36.8 1.9 40 11-50 98-146 (196)
178 2hnk_A SAM-dependent O-methylt 94.4 0.049 1.7E-06 36.0 4.2 38 11-53 148-185 (239)
179 3u81_A Catechol O-methyltransf 94.4 0.021 7.2E-07 37.3 2.3 39 11-52 135-173 (221)
180 3tfw_A Putative O-methyltransf 94.3 0.06 2E-06 36.0 4.4 38 11-53 137-174 (248)
181 1dl5_A Protein-L-isoaspartate 94.1 0.023 7.9E-07 39.4 2.2 41 2-50 133-176 (317)
182 2f8l_A Hypothetical protein LM 94.0 0.044 1.5E-06 38.4 3.5 48 2-49 191-256 (344)
183 1jsx_A Glucose-inhibited divis 94.0 0.029 9.8E-07 36.0 2.3 41 2-48 122-164 (207)
184 2oxt_A Nucleoside-2'-O-methylt 93.9 0.094 3.2E-06 35.7 4.8 48 2-51 131-187 (265)
185 2yvl_A TRMI protein, hypotheti 93.8 0.089 3E-06 34.6 4.4 43 2-51 147-192 (248)
186 2ozv_A Hypothetical protein AT 93.8 0.038 1.3E-06 37.3 2.6 21 28-48 149-169 (260)
187 3tr6_A O-methyltransferase; ce 93.7 0.078 2.7E-06 34.4 4.0 38 11-53 141-178 (225)
188 2fca_A TRNA (guanine-N(7)-)-me 93.3 0.084 2.9E-06 34.4 3.6 21 29-49 133-153 (213)
189 3adn_A Spermidine synthase; am 93.2 0.074 2.5E-06 36.8 3.4 48 2-49 145-198 (294)
190 3lec_A NADB-rossmann superfami 93.1 0.57 1.9E-05 31.3 7.5 78 2-114 79-162 (230)
191 1i9g_A Hypothetical protein RV 93.1 0.031 1E-06 37.7 1.3 42 2-50 160-204 (280)
192 2gpy_A O-methyltransferase; st 93.0 0.029 1E-06 36.8 1.1 37 11-52 127-163 (233)
193 2uyo_A Hypothetical protein ML 93.0 0.2 6.8E-06 35.0 5.4 87 12-99 181-274 (310)
194 2wa2_A Non-structural protein 92.9 0.1 3.5E-06 35.7 3.7 47 2-50 139-194 (276)
195 3dou_A Ribosomal RNA large sub 92.8 0.053 1.8E-06 34.9 2.0 23 28-50 118-140 (191)
196 2yxl_A PH0851 protein, 450AA l 92.7 0.14 4.9E-06 37.3 4.5 53 2-54 317-394 (450)
197 1ws6_A Methyltransferase; stru 92.4 0.097 3.3E-06 32.2 2.9 38 11-52 111-150 (171)
198 3ntv_A MW1564 protein; rossman 92.4 0.021 7.2E-07 37.7 -0.3 38 11-53 143-180 (232)
199 2bm8_A Cephalosporin hydroxyla 92.3 0.12 4E-06 34.4 3.3 35 11-50 153-188 (236)
200 2vdv_E TRNA (guanine-N(7)-)-me 91.9 0.022 7.6E-07 37.9 -0.6 20 29-48 153-172 (246)
201 3c3p_A Methyltransferase; NP_9 91.5 0.066 2.3E-06 34.5 1.4 38 11-53 127-164 (210)
202 3ckk_A TRNA (guanine-N(7)-)-me 91.5 0.14 4.9E-06 34.0 3.0 21 29-49 148-168 (235)
203 2i7c_A Spermidine synthase; tr 91.4 0.087 3E-06 36.0 2.0 38 11-48 152-191 (283)
204 1i1n_A Protein-L-isoaspartate 91.3 0.1 3.6E-06 33.9 2.1 31 11-49 152-182 (226)
205 1nv8_A HEMK protein; class I a 91.0 0.34 1.2E-05 33.1 4.6 45 2-47 180-247 (284)
206 2avd_A Catechol-O-methyltransf 90.8 0.088 3E-06 34.2 1.4 38 11-53 146-183 (229)
207 2fhp_A Methylase, putative; al 90.8 0.27 9.3E-06 30.6 3.7 39 11-52 117-157 (187)
208 2ift_A Putative methylase HI07 90.6 0.13 4.3E-06 33.2 2.0 39 11-52 126-166 (201)
209 1mjf_A Spermidine synthase; sp 90.6 0.12 4.2E-06 35.2 2.1 39 11-49 153-193 (281)
210 1sqg_A SUN protein, FMU protei 90.6 0.21 7.3E-06 36.1 3.4 43 11-53 316-378 (429)
211 1sui_A Caffeoyl-COA O-methyltr 90.4 0.2 6.9E-06 33.5 3.0 38 11-53 157-194 (247)
212 1ixk_A Methyltransferase; open 90.2 0.22 7.4E-06 34.6 3.1 25 29-53 226-250 (315)
213 2esr_A Methyltransferase; stru 90.1 0.13 4.5E-06 32.0 1.7 40 11-53 101-142 (177)
214 3tma_A Methyltransferase; thum 90.0 0.43 1.5E-05 33.4 4.5 48 2-49 261-317 (354)
215 3dxy_A TRNA (guanine-N(7)-)-me 89.9 0.12 4.1E-06 34.0 1.5 38 12-49 107-150 (218)
216 2pbf_A Protein-L-isoaspartate 89.7 0.18 6.2E-06 32.7 2.2 32 11-50 163-194 (227)
217 3cbg_A O-methyltransferase; cy 89.6 0.14 4.9E-06 33.7 1.7 38 11-53 149-186 (232)
218 2b2c_A Spermidine synthase; be 89.4 0.17 5.8E-06 35.3 2.0 38 11-49 182-222 (314)
219 1uir_A Polyamine aminopropyltr 89.1 0.18 6.2E-06 35.0 2.0 39 11-49 152-195 (314)
220 3gjy_A Spermidine synthase; AP 89.0 0.2 6.9E-06 35.2 2.1 40 11-50 160-201 (317)
221 3c3y_A Pfomt, O-methyltransfer 88.8 0.19 6.5E-06 33.3 1.8 37 11-52 148-184 (237)
222 2frx_A Hypothetical protein YE 88.6 0.49 1.7E-05 34.9 4.1 25 29-53 226-250 (479)
223 2b25_A Hypothetical protein; s 88.3 0.28 9.6E-06 34.1 2.5 42 2-50 174-220 (336)
224 1zq9_A Probable dimethyladenos 88.1 0.18 6.2E-06 34.5 1.4 44 2-46 84-144 (285)
225 3dr5_A Putative O-methyltransf 88.1 0.23 8E-06 32.6 1.9 37 11-52 130-166 (221)
226 3gdh_A Trimethylguanosine synt 87.8 0.0047 1.6E-07 40.8 -6.6 77 11-106 145-221 (241)
227 3k6r_A Putative transferase PH 87.7 0.78 2.7E-05 31.5 4.4 69 2-99 182-252 (278)
228 3m6w_A RRNA methylase; rRNA me 87.1 0.41 1.4E-05 35.3 2.9 24 29-52 209-232 (464)
229 2o07_A Spermidine synthase; st 87.0 0.26 8.7E-06 34.2 1.7 39 11-49 169-209 (304)
230 3ajd_A Putative methyltransfer 86.9 0.62 2.1E-05 31.4 3.5 26 28-53 190-215 (274)
231 3a27_A TYW2, uncharacterized p 86.9 0.24 8.2E-06 33.6 1.4 47 2-54 176-224 (272)
232 2qy6_A UPF0209 protein YFCK; s 86.5 0.39 1.4E-05 32.5 2.4 20 86-105 217-236 (257)
233 2ih2_A Modification methylase 86.4 0.8 2.7E-05 32.5 4.0 20 30-49 145-164 (421)
234 1xj5_A Spermidine synthase 1; 86.3 0.28 9.5E-06 34.5 1.5 38 11-48 195-234 (334)
235 2fpo_A Methylase YHHF; structu 86.1 0.47 1.6E-05 30.5 2.5 39 11-52 123-163 (202)
236 2pt6_A Spermidine synthase; tr 86.1 0.34 1.2E-05 33.8 1.9 37 11-48 190-229 (321)
237 1ne2_A Hypothetical protein TA 85.9 0.68 2.3E-05 29.3 3.2 37 2-39 102-139 (200)
238 1iy9_A Spermidine synthase; ro 85.3 0.21 7.1E-06 34.0 0.5 38 11-48 149-188 (275)
239 1inl_A Spermidine synthase; be 85.3 0.28 9.4E-06 33.8 1.1 38 11-48 164-204 (296)
240 2okc_A Type I restriction enzy 85.0 0.39 1.3E-05 34.9 1.9 49 2-50 243-308 (445)
241 3g89_A Ribosomal RNA small sub 84.6 0.38 1.3E-05 32.2 1.5 61 11-104 152-212 (249)
242 4hc4_A Protein arginine N-meth 83.5 0.65 2.2E-05 33.3 2.4 46 2-47 139-187 (376)
243 2km1_A Protein DRE2; yeast, an 82.8 0.78 2.7E-05 28.3 2.3 19 29-47 78-96 (136)
244 2cmg_A Spermidine synthase; tr 82.0 0.6 2E-05 31.6 1.7 31 11-48 140-170 (262)
245 2igt_A SAM dependent methyltra 81.1 2.7 9.2E-05 29.3 4.9 25 27-51 250-274 (332)
246 2cz4_A Hypothetical protein TT 79.6 3.8 0.00013 24.4 4.5 28 23-50 81-110 (119)
247 4azs_A Methyltransferase WBDD; 78.5 0.38 1.3E-05 36.1 -0.2 44 11-54 135-178 (569)
248 2as0_A Hypothetical protein PH 77.4 2 6.9E-05 30.5 3.3 41 11-51 290-337 (396)
249 1wg8_A Predicted S-adenosylmet 77.1 1.1 3.9E-05 30.9 1.9 30 26-55 210-239 (285)
250 3tka_A Ribosomal RNA small sub 76.8 1.1 3.7E-05 31.9 1.7 30 26-55 251-280 (347)
251 4gqb_A Protein arginine N-meth 76.6 1.2 4.2E-05 34.1 2.1 44 2-45 418-463 (637)
252 1ssz_A Pulmonary surfactant-as 75.6 1.5 5E-05 19.6 1.4 18 28-45 4-21 (34)
253 3tm4_A TRNA (guanine N2-)-meth 75.6 6.2 0.00021 27.8 5.4 69 2-104 275-352 (373)
254 2yx1_A Hypothetical protein MJ 75.2 1.7 5.9E-05 30.3 2.4 46 2-53 250-295 (336)
255 1wxx_A TT1595, hypothetical pr 75.1 2.6 8.9E-05 29.8 3.4 40 11-50 280-326 (382)
256 3evf_A RNA-directed RNA polyme 74.0 4.6 0.00016 27.8 4.2 41 11-52 141-186 (277)
257 3gnl_A Uncharacterized protein 67.8 7.9 0.00027 26.0 4.3 78 2-114 79-162 (244)
258 1m6y_A S-adenosyl-methyltransf 67.4 1.9 6.7E-05 29.8 1.2 30 26-55 222-251 (301)
259 4dmg_A Putative uncharacterize 66.5 4.3 0.00015 29.1 2.9 41 11-51 281-328 (393)
260 1wy7_A Hypothetical protein PH 63.4 9.8 0.00033 23.8 4.0 37 2-39 104-141 (207)
261 2hiy_A Hypothetical protein; C 61.4 16 0.00053 23.4 4.6 36 77-113 16-52 (183)
262 3m4x_A NOL1/NOP2/SUN family pr 61.4 3.9 0.00013 30.0 1.9 24 29-52 214-237 (456)
263 1whz_A Hypothetical protein; a 60.8 9.4 0.00032 20.1 3.0 19 82-100 5-23 (70)
264 4fzv_A Putative methyltransfer 60.5 4.2 0.00015 28.9 1.9 27 29-55 264-290 (359)
265 3c0k_A UPF0064 protein YCCW; P 59.1 7.1 0.00024 27.7 2.9 38 11-49 294-339 (396)
266 1yub_A Ermam, rRNA methyltrans 58.8 2.8 9.7E-05 27.6 0.8 48 2-49 82-145 (245)
267 2zig_A TTHA0409, putative modi 58.7 4.4 0.00015 27.6 1.7 20 29-48 77-96 (297)
268 3ua3_A Protein arginine N-meth 55.9 5.8 0.0002 31.1 2.1 37 10-46 495-531 (745)
269 2rbg_A Putative uncharacterize 55.9 7.2 0.00025 23.3 2.0 32 17-49 64-95 (126)
270 1lfp_A Hypothetical protein AQ 55.8 20 0.0007 24.2 4.5 34 22-55 60-106 (249)
271 3ldg_A Putative uncharacterize 53.0 33 0.0011 24.4 5.6 48 2-49 290-343 (384)
272 3o4f_A Spermidine synthase; am 52.2 4.8 0.00016 27.9 1.0 21 29-49 178-198 (294)
273 2dwf_A Pulmonary surfactant-as 51.7 7.7 0.00026 17.6 1.3 18 28-45 4-21 (34)
274 3fpn_B Geobacillus stearotherm 50.8 6.7 0.00023 22.8 1.4 31 78-108 19-49 (106)
275 3eld_A Methyltransferase; flav 50.7 29 0.001 24.1 4.8 37 11-48 148-190 (300)
276 3k0b_A Predicted N6-adenine-sp 49.8 14 0.00048 26.4 3.2 49 2-50 297-351 (393)
277 3fpn_A Geobacillus stearotherm 49.2 39 0.0013 20.0 6.0 47 29-101 7-53 (119)
278 1cee_B Wiskott-aldrich syndrom 49.2 8.5 0.00029 19.9 1.5 19 83-101 34-52 (59)
279 2lnh_A N-WAsp, neural wiskott- 48.6 3.4 0.00012 22.0 -0.1 17 84-100 24-40 (65)
280 2h1r_A Dimethyladenosine trans 48.3 26 0.00088 23.8 4.3 31 2-33 97-128 (299)
281 1boo_A Protein (N-4 cytosine-s 47.7 8.4 0.00029 26.6 1.7 22 27-48 62-83 (323)
282 2ar0_A M.ecoki, type I restric 47.5 15 0.00051 27.4 3.2 48 2-49 249-312 (541)
283 1vfj_A Nitrogen regulatory pro 47.2 21 0.00072 20.7 3.2 28 23-50 65-96 (116)
284 3t9z_A GLNK3, nitrogen regulat 47.1 21 0.00071 21.1 3.2 28 23-50 65-96 (118)
285 3ncq_A Nitrogen regulatory pro 47.0 21 0.00072 21.1 3.2 28 23-50 65-96 (119)
286 3lap_A Arginine repressor; arg 46.4 10 0.00034 24.1 1.8 23 78-100 31-53 (170)
287 3l7p_A Putative nitrogen regul 45.5 24 0.00081 20.7 3.2 28 23-50 68-99 (115)
288 2ns1_B Nitrogen regulatory pro 44.9 19 0.00064 21.0 2.7 27 24-50 70-100 (116)
289 3mhy_A PII-like protein PZ; PI 44.6 20 0.00067 20.9 2.8 28 23-50 65-96 (112)
290 4aff_A Nitrogen regulatory pro 44.2 21 0.00073 20.9 2.9 28 23-50 65-96 (116)
291 3dfe_A Putative PII-like signa 44.1 31 0.0011 20.1 3.6 27 24-50 69-97 (111)
292 2yjg_A Lactate racemase apopro 49.9 4.8 0.00016 29.4 0.0 46 11-56 277-324 (436)
293 1hwu_A PII protein; herbaspiri 43.6 26 0.0009 20.1 3.2 28 23-50 65-96 (112)
294 2b78_A Hypothetical protein SM 43.0 11 0.00039 26.6 1.8 39 11-49 286-331 (385)
295 2px2_A Genome polyprotein [con 42.2 56 0.0019 22.3 5.0 45 2-47 129-181 (269)
296 4e5v_A Putative THUA-like prot 41.8 80 0.0027 21.4 6.1 42 8-53 56-97 (281)
297 2jso_A Polymyxin resistance pr 41.2 19 0.00064 20.1 2.1 18 78-95 68-85 (88)
298 2eg2_A Nitrogen regulatory pro 41.1 29 0.001 19.9 3.2 28 23-50 65-96 (112)
299 3gcz_A Polyprotein; flavivirus 41.0 11 0.00037 26.0 1.4 38 11-48 157-200 (282)
300 3v4g_A Arginine repressor; vib 40.6 17 0.00059 23.3 2.2 20 79-98 45-64 (180)
301 4dcm_A Ribosomal RNA large sub 40.4 74 0.0025 22.4 5.7 41 8-51 97-138 (375)
302 3c6k_A Spermine synthase; sper 39.7 10 0.00036 27.2 1.2 21 28-48 310-330 (381)
303 1kon_A Protein YEBC, YEBC; alp 39.5 17 0.00058 24.6 2.1 16 40-55 94-109 (249)
304 3ce8_A Putative PII-like nitro 38.6 35 0.0012 20.3 3.2 27 23-49 85-112 (120)
305 3ouv_A Serine/threonine protei 38.1 33 0.0011 17.8 2.9 24 78-101 12-35 (71)
306 2lmc_A Bacterial RNA polymeras 38.1 43 0.0015 18.4 3.2 23 82-104 54-80 (84)
307 3q7r_A Transcriptional regulat 38.0 51 0.0017 19.3 3.7 29 3-34 64-94 (121)
308 1g60_A Adenine-specific methyl 37.8 15 0.00052 24.3 1.7 21 28-48 53-73 (260)
309 1mw7_A Hypothetical protein HP 37.2 17 0.00058 24.4 1.9 18 78-95 100-117 (240)
310 2gw8_A PII signal transduction 36.4 29 0.001 20.0 2.7 27 24-50 68-98 (114)
311 3v97_A Ribosomal RNA large sub 36.2 15 0.00053 28.3 1.7 24 26-49 634-657 (703)
312 1x4c_A Splicing factor, argini 35.8 58 0.002 18.1 4.8 32 81-113 26-57 (108)
313 1f3m_A Serine/threonine-protei 35.5 23 0.00078 19.5 1.9 18 83-100 30-47 (80)
314 3bzq_A Nitrogen regulatory pro 35.2 26 0.0009 20.2 2.3 27 24-50 68-98 (114)
315 1ej5_A WAsp, wiskott-aldrich s 33.8 24 0.00083 20.6 1.9 16 84-99 23-38 (107)
316 3beg_B Splicing factor, argini 33.6 62 0.0021 18.2 3.8 31 82-113 28-58 (115)
317 1jdq_A TM006 protein, hypothet 33.3 68 0.0023 18.1 4.7 21 84-104 66-86 (98)
318 2o66_A PII protein; regulation 33.0 39 0.0013 20.4 2.9 28 23-50 78-109 (135)
319 2j9c_A GLNK1, hypothetical nit 32.3 36 0.0012 19.9 2.6 27 24-50 68-98 (119)
320 1ny8_A Protein YRBA; structure 32.1 35 0.0012 19.5 2.4 18 80-97 73-90 (97)
321 2fi0_A Conserved domain protei 31.9 34 0.0012 18.6 2.3 18 82-99 61-78 (81)
322 4f3q_A Transcriptional regulat 31.7 10 0.00035 25.6 0.1 34 22-55 63-109 (247)
323 1b4a_A Arginine repressor; hel 31.7 33 0.0011 21.2 2.4 21 79-99 17-37 (149)
324 2h80_A STAR-related lipid tran 31.7 28 0.00097 19.1 1.8 16 83-98 20-35 (81)
325 1eg2_A Modification methylase 31.3 22 0.00075 24.6 1.7 22 27-48 84-105 (319)
326 2wbr_A GW182, gawky, LD47780P; 30.3 76 0.0026 17.7 3.8 31 82-113 19-50 (89)
327 4hjf_A Ggdef family protein; s 30.1 1.4E+02 0.0047 20.7 6.1 62 28-96 73-135 (340)
328 3ldu_A Putative methylase; str 29.9 66 0.0023 22.7 4.1 48 2-49 291-344 (385)
329 2jjq_A Uncharacterized RNA met 29.4 1.1E+02 0.0039 21.9 5.3 42 2-48 344-386 (425)
330 2qfm_A Spermine synthase; sper 29.2 21 0.00073 25.4 1.4 21 29-49 290-314 (364)
331 1wwu_A Hypothetical protein FL 29.0 31 0.0011 19.9 1.8 20 82-101 24-43 (99)
332 1x8d_A Hypothetical protein YI 28.7 87 0.003 17.9 3.8 30 84-113 26-58 (104)
333 3t7v_A Methylornithine synthas 28.4 27 0.00093 24.1 1.8 20 81-100 321-340 (350)
334 1j26_A Immature colon carcinom 28.1 63 0.0022 18.9 3.1 26 22-47 55-80 (112)
335 1qam_A ERMC' methyltransferase 27.7 31 0.0011 22.6 1.9 31 2-32 83-115 (244)
336 3a1y_A 50S ribosomal protein P 27.4 60 0.0021 16.5 2.6 21 78-98 13-33 (58)
337 1mhm_B Adometdc, samdc, S-aden 27.4 64 0.0022 17.4 2.8 26 79-104 37-62 (72)
338 1yg0_A COP associated protein; 27.1 37 0.0013 16.1 1.8 16 83-98 50-65 (66)
339 2c71_A Glycoside hydrolase, fa 26.9 48 0.0016 21.3 2.7 29 21-49 127-156 (216)
340 4i8i_A Hypothetical protein; 5 26.5 1.5E+02 0.0051 20.0 5.3 44 12-55 95-143 (271)
341 4a2a_A Cell division protein F 26.2 1.4E+02 0.0049 21.3 5.3 81 21-103 104-189 (419)
342 3aaf_A Werner syndrome ATP-dep 25.5 36 0.0012 20.4 1.8 70 21-98 12-84 (134)
343 3vyw_A MNMC2; tRNA wobble urid 25.4 80 0.0027 21.9 3.7 23 84-106 228-250 (308)
344 3rht_A (gatase1)-like protein; 25.3 1E+02 0.0036 20.6 4.2 34 11-48 51-85 (259)
345 4e8u_A Putative uncharacterize 24.9 46 0.0016 21.2 2.2 31 83-113 34-69 (172)
346 3ijw_A Aminoglycoside N3-acety 23.9 83 0.0028 21.4 3.5 42 9-50 30-73 (268)
347 1pqw_A Polyketide synthase; ro 23.6 21 0.00071 22.2 0.4 21 30-50 118-138 (198)
348 3lvj_C Sulfurtransferase TUSA; 23.5 95 0.0033 16.6 3.3 24 84-107 50-73 (82)
349 4dvj_A Putative zinc-dependent 23.4 55 0.0019 22.7 2.7 19 30-48 251-269 (363)
350 3twe_A Alpha4H; unknown functi 22.9 42 0.0014 14.0 1.2 16 27-42 12-27 (27)
351 2jvr_A Nucleolar protein 3; RN 22.5 1.2E+02 0.004 17.3 3.8 32 82-113 40-74 (111)
352 2e8m_A Epidermal growth factor 22.5 28 0.00095 20.1 0.8 19 82-100 34-52 (99)
353 1cc8_A Protein (metallochapero 22.4 84 0.0029 15.6 3.4 19 82-100 51-69 (73)
354 3af5_A Putative uncharacterize 22.2 1.3E+02 0.0044 22.9 4.6 40 11-50 386-431 (651)
355 3lkd_A Type I restriction-modi 22.1 70 0.0024 23.9 3.1 19 30-48 338-357 (542)
356 3qwb_A Probable quinone oxidor 21.5 71 0.0024 21.6 2.9 20 31-50 229-248 (334)
357 3fxd_A Protein ICMQ; helix bun 21.1 38 0.0013 17.4 1.0 21 22-42 4-24 (57)
358 1pl8_A Human sorbitol dehydrog 21.0 67 0.0023 22.1 2.7 21 30-50 254-274 (356)
359 3iwl_A Copper transport protei 21.0 89 0.0031 15.4 3.0 18 82-99 46-63 (68)
360 2dky_A RHO-GTPase-activating p 20.9 47 0.0016 18.6 1.5 15 84-98 23-37 (91)
361 2kng_A Protein LSR2; DNA-bindi 20.9 76 0.0026 16.2 2.1 18 83-100 14-31 (55)
362 2dnp_A RNA-binding protein 14; 20.8 1.1E+02 0.0036 16.1 4.3 30 82-113 21-50 (90)
363 3jva_A Dipeptide epimerase; en 20.7 2.2E+02 0.0074 19.7 5.4 79 15-102 186-264 (354)
364 3m6i_A L-arabinitol 4-dehydrog 20.5 69 0.0024 22.0 2.7 21 30-50 264-284 (363)
365 3khk_A Type I restriction-modi 20.0 32 0.0011 25.8 0.9 19 30-48 376-394 (544)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.97 E-value=8.2e-31 Score=187.41 Aligned_cols=111 Identities=26% Similarity=0.441 Sum_probs=100.3
Q ss_pred CCCCCC-CCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 1 MDDMFQ-NVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 1 ~gd~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+||||+ +.|.+|+|++++|||+|+|+++.+||++++++|+|||+++|+|.+.++++..+. ....+|+.|++.+ +|
T Consensus 234 ~gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~---~~~~~dl~ml~~~-~g 309 (353)
T 4a6d_A 234 EGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPL---LTQLYSLNMLVQT-EG 309 (353)
T ss_dssp ESCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH---HHHHHHHHHHHSS-SC
T ss_pred cCccccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH---HHHHHHHHHHHhC-CC
Confidence 489998 566789999999999999999999999999999999999999999987755442 3456899999864 99
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
++||.+||++||++|||+.++++++++.+++|+|+|
T Consensus 310 ~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 310 QERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred cCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 999999999999999999999999999999999998
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.94 E-value=1.5e-26 Score=165.97 Aligned_cols=115 Identities=46% Similarity=0.913 Sum_probs=100.8
Q ss_pred CCCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 1 MDDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 1 ~gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
.|||++++|++|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++........+....+|+.|+..+.+|+
T Consensus 250 ~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~ 329 (364)
T 3p9c_A 250 GGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGR 329 (364)
T ss_dssp ECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCC
T ss_pred eCCcCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCc
Confidence 38999988878999999999999999999999999999999999999999988765433222334567888885446899
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
+||.+||+++|++|||+.+++.++.+..++||++|
T Consensus 330 ~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 330 ERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp CCBHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred cCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 99999999999999999999999999999999997
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.93 E-value=8.7e-26 Score=162.09 Aligned_cols=115 Identities=51% Similarity=0.895 Sum_probs=100.8
Q ss_pred CCCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 1 MDDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 1 ~gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
.|||++++|.+|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++....+...+....+|+.|+..+.+|+
T Consensus 252 ~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 331 (368)
T 3reo_A 252 GGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGK 331 (368)
T ss_dssp ECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCC
T ss_pred ecCCCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCc
Confidence 38999988878999999999999999999999999999999999999999988765443223344568888886545899
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
+||.+||+++|++|||+.+++.+..+..++||++|
T Consensus 332 ~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 332 ERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred cCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 99999999999999999999999999999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.89 E-value=6e-23 Score=146.15 Aligned_cols=109 Identities=27% Similarity=0.517 Sum_probs=96.0
Q ss_pred CCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCcee
Q 048196 2 DDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKK 81 (115)
Q Consensus 2 gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~ 81 (115)
||+++++|..|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++..... ....+++.|+.. .+++.
T Consensus 239 ~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~-~~~~~ 313 (348)
T 3lst_A 239 GDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH----QSKEMDFMMLAA-RTGQE 313 (348)
T ss_dssp CCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC----HHHHHHHHHHHT-TSCCC
T ss_pred cCCCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc----hhhhcChhhhhc-CCCcC
Confidence 7999888866999999999999999999999999999999999999999888763322 234577888765 58999
Q ss_pred CCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 82 RTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
||.+||.++|++|||+.+++.+..+..++||++|
T Consensus 314 ~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 314 RTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 9999999999999999999999778899999986
No 5
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.89 E-value=8.4e-23 Score=145.78 Aligned_cols=114 Identities=33% Similarity=0.605 Sum_probs=97.9
Q ss_pred CCCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCC---CCEEEEEeeecCCCCCCchhhhhchhccchhcccCC
Q 048196 1 MDDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPE---DGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNP 77 (115)
Q Consensus 1 ~gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p---gg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (115)
.||+++++|.+|+|++++++|+|+|+++.++|++++++|+| ||+++|.|.+.++....+........+++.|+.. .
T Consensus 242 ~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~ 320 (358)
T 1zg3_A 242 GGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTM-F 320 (358)
T ss_dssp ECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHH-H
T ss_pred eCccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhcc-C
Confidence 37999988878999999999999999999999999999999 9999999999876644321112345678877764 4
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
+|+.||.+||.++|+++||+.+++.+..+..++||++|
T Consensus 321 ~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 321 LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp SCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 89999999999999999999999999888899999987
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.88 E-value=1.2e-22 Score=145.60 Aligned_cols=108 Identities=23% Similarity=0.507 Sum_probs=95.8
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
||+++++|. +|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++..... ...+|+.|+.. .+|+
T Consensus 259 ~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-----~~~~d~~~~~~-~~g~ 332 (369)
T 3gwz_A 259 GDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-----TLFVDLLLLVL-VGGA 332 (369)
T ss_dssp CCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-----HHHHHHHHHHH-HSCC
T ss_pred cCCCCCCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-----hhHhhHHHHhh-cCCc
Confidence 799988884 6999999999999999999999999999999999999999988764321 34678888775 5899
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEE-cCCceEEEEEEC
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEW-FTCNLWVRDFYK 115 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~lie~~~ 115 (115)
+||.+||.++|++|||+.+++.+ ..+..++||++|
T Consensus 333 ~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 333 ERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 99999999999999999999999 578899999986
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.88 E-value=1.1e-22 Score=143.69 Aligned_cols=105 Identities=21% Similarity=0.370 Sum_probs=92.1
Q ss_pred CCCCCCCC-cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 2 DDMFQNVP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 2 gd~~~~~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
||+++++| ..|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++. .+ ...+|+.|+.. .+++
T Consensus 226 ~d~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~-----~~~~d~~~~~~-~~~~ 297 (332)
T 3i53_A 226 GSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HA-----GTGMDLRMLTY-FGGK 297 (332)
T ss_dssp CCTTSCCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----C-----CHHHHHHHHHH-HSCC
T ss_pred CCCCCCCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Cc-----cHHHHHHHHhh-CCCC
Confidence 79998888 5699999999999999999999999999999999999999988765 21 24577787765 5899
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
.||.+||.++|++|||+.+++.+.++ .++||++|
T Consensus 298 ~~t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 298 ERSLAELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 99999999999999999999999988 99999975
No 8
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.87 E-value=5.5e-22 Score=141.28 Aligned_cols=112 Identities=31% Similarity=0.604 Sum_probs=95.8
Q ss_pred CCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCC---CCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPE---DGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p---gg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+++++|.+|+|++++++|+|+|+++.++|++++++|+| ||+++|.|...++....+........+++.|+. . +
T Consensus 238 ~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~ 315 (352)
T 1fp2_A 238 GDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-N 315 (352)
T ss_dssp CCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-T
T ss_pred ccccCCCCCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-c
Confidence 7999888888999999999999999999999999999999 999999999887654331111234457777776 3 5
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
|+.||.+||.++|++|||+.+++.+..+..+|||++|
T Consensus 316 g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 316 GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp CCCEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 8999999999999999999999998888899999987
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.87 E-value=3.2e-22 Score=143.50 Aligned_cols=113 Identities=43% Similarity=0.692 Sum_probs=94.6
Q ss_pred CCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCcee
Q 048196 2 DDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKK 81 (115)
Q Consensus 2 gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~ 81 (115)
||+++++|.+|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++....+...+....+++.|+.. .+++.
T Consensus 259 ~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~ 337 (372)
T 1fp1_D 259 GDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFIT-VGGRE 337 (372)
T ss_dssp CCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHH-HSCCC
T ss_pred CCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhc-cCCcc
Confidence 79998888789999999999999999999999999999999999999998876643321122345677777753 47899
Q ss_pred CCHHHHHHHHHhCCCCeeEEEEc-CCceEEEEEEC
Q 048196 82 RTKHEFLTLATGAGFSGTRFEWF-TCNLWVRDFYK 115 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~~~~-~~~~~lie~~~ 115 (115)
||.+||.++|+++||+.+++.+. .+..+|||++|
T Consensus 338 ~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 338 RTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 99999999999999999999885 44269999987
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.87 E-value=7.3e-22 Score=139.44 Aligned_cols=109 Identities=24% Similarity=0.378 Sum_probs=94.8
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
||+++++|. .|+|++++++|+|+++++.++|++++++|+|||+++|.|.+.++.... .....+++.|+.. .+|+
T Consensus 224 ~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~-~~~~ 298 (334)
T 2ip2_A 224 GDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS----PMSVLWDVHLFMA-CAGR 298 (334)
T ss_dssp SCTTTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC----HHHHHHHHHHHHH-HSCC
T ss_pred CCCCCCCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc----chhHHhhhHhHhh-CCCc
Confidence 789888776 599999999999999999999999999999999999999988765332 1235577777764 3799
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
+||.+||.++++++||+.+++.+.++..++||++|
T Consensus 299 ~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 299 HRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 99999999999999999999999888899999986
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.84 E-value=8.8e-21 Score=135.74 Aligned_cols=114 Identities=17% Similarity=0.203 Sum_probs=90.2
Q ss_pred CCCCCCC---CCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-hhhhchhccchhccc
Q 048196 1 MDDMFQN---VPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETST-VSKRNSQLDVLMMTQ 75 (115)
Q Consensus 1 ~gd~~~~---~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~-~~~~~~~~~l~~~~~ 75 (115)
.||++++ +|. .|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++...... ........++.|+.
T Consensus 235 ~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~- 313 (363)
T 3dp7_A 235 GANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMA- 313 (363)
T ss_dssp ECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSS-
T ss_pred EccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhh-
Confidence 3799984 674 59999999999999999999999999999999999999998876543211 00111223444444
Q ss_pred CCCceeCCHHHHHHHHHhCCCCeeEEEEcC-CceEEEEEEC
Q 048196 76 NPSGKKRTKHEFLTLATGAGFSGTRFEWFT-CNLWVRDFYK 115 (115)
Q Consensus 76 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~lie~~~ 115 (115)
..+++.||.+||.++|++|||+.+++.+.. ...++||++|
T Consensus 314 ~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 314 NGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp CSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred CCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 247889999999999999999999988664 5699999875
No 12
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.83 E-value=2e-20 Score=132.94 Aligned_cols=110 Identities=9% Similarity=0.111 Sum_probs=92.1
Q ss_pred CCCCCCC---CCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccC
Q 048196 1 MDDMFQN---VPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQN 76 (115)
Q Consensus 1 ~gd~~~~---~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~ 76 (115)
.||+++. .|. .|+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++....+. ....+++.|+..+
T Consensus 235 ~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~~ 311 (352)
T 3mcz_A 235 EKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA---LSADFSLHMMVNT 311 (352)
T ss_dssp ECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH---HHHHHHHHHHHHS
T ss_pred eCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc---hHHHhhHHHHhhC
Confidence 3799984 565 59999999999999999999999999999999999999999887644332 2356788887655
Q ss_pred CCceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 77 PSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 77 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
.+++.||.+||.++|++|||++++.. .+..+++.++|
T Consensus 312 ~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 312 NHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp TTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred CCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 68999999999999999999998843 36688888876
No 13
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.80 E-value=1.9e-19 Score=126.87 Aligned_cols=110 Identities=21% Similarity=0.324 Sum_probs=93.1
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
||+++ ++|. .|+|++++++|+|+++++.++|++++++|+|||+++|.|...++....+. ....+++.|+....++
T Consensus 222 ~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 298 (335)
T 2r3s_A 222 GSAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPP---DAAAFSLVMLATTPNG 298 (335)
T ss_dssp SCTTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSH---HHHHHHHHHHHHSSSC
T ss_pred cccccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCch---HHHHHHHHHHeeCCCC
Confidence 78888 6776 59999999999999999999999999999999999999998876533321 2345677777655588
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEE
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFY 114 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~ 114 (115)
+.||.++|.++++++||+.+++.+..+..++++++
T Consensus 299 ~~~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 299 DAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp CCCCHHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred CcCCHHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 99999999999999999999999888778888775
No 14
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.80 E-value=6.8e-20 Score=130.49 Aligned_cols=109 Identities=24% Similarity=0.426 Sum_probs=92.0
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee-cCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESI-LPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
||+++++|. .|+|++++++|+|+++++.++|++++++|+|||+++|.|.. .++..... ....+++.|+.. .++
T Consensus 240 ~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~-~~~ 314 (360)
T 1tw3_A 240 GDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNE----QFTELDLRMLVF-LGG 314 (360)
T ss_dssp CCTTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSH----HHHHHHHHHHHH-HSC
T ss_pred CCCCCCCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcc----hhhhccHHHhhh-cCC
Confidence 788887886 59999999999999999999999999999999999999988 65443221 234567777654 378
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEEcCCc-----eEEEEEEC
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEWFTCN-----LWVRDFYK 115 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~~~~~-----~~lie~~~ 115 (115)
+.||.++|.++|+++||+.+++.+.++. .++||++|
T Consensus 315 ~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 315 ALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp CCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 9999999999999999999999888665 89999975
No 15
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.80 E-value=5.4e-19 Score=126.05 Aligned_cols=107 Identities=10% Similarity=0.220 Sum_probs=88.4
Q ss_pred CCCCC-CCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 2 DDMFQ-NVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 2 gd~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
||+++ ++|.+|+|++++++|+|+|+++.++|++++++|+|||+++|.|...++. ..+.. ...+ .|+....+++
T Consensus 247 ~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~---~~~~--~~~~~~~~g~ 320 (359)
T 1x19_A 247 VDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPNF---DYLS--HYILGAGMPF 320 (359)
T ss_dssp CCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCCH---HHHH--HHGGGGGSSC
T ss_pred CccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCchH---HHHH--HHHHhcCCCC
Confidence 78888 6666799999999999999999999999999999999999999988765 22211 1222 4443334577
Q ss_pred e----CCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 81 K----RTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 81 ~----rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
+ ||.+||.++|+++||+.+++.+.+ ..++|+++|
T Consensus 321 ~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 321 SVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp CCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred cccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 7 999999999999999999999887 889999987
No 16
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=1.5e-19 Score=129.20 Aligned_cols=109 Identities=24% Similarity=0.445 Sum_probs=88.8
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee--ecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES--ILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+++++|. .|+|++++++|+|+++++.++|++++++|+|||+++|.|. +.++.... .....+++.|+.. .+
T Consensus 239 ~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~-~~ 313 (374)
T 1qzz_A 239 GDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADR----FFSTLLDLRMLTF-MG 313 (374)
T ss_dssp CCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------H----HHHHHHHHHHHHH-HS
T ss_pred CCCCCcCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCc----chhhhcchHHHHh-CC
Confidence 788887886 5999999999999999999999999999999999999998 76654221 1234567777654 47
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcCCce-----EEEEEEC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFTCNL-----WVRDFYK 115 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~-----~lie~~~ 115 (115)
++.||.++|.++|+++||+.+++...++.. ++||++|
T Consensus 314 ~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 314 GRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp CCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 899999999999999999999999888777 9999875
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.48 E-value=1.5e-13 Score=94.50 Aligned_cols=113 Identities=13% Similarity=0.116 Sum_probs=76.0
Q ss_pred CCCCC-CCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhc-------
Q 048196 2 DDMFQ-NVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMM------- 73 (115)
Q Consensus 2 gd~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~------- 73 (115)
||+.+ +.++.|++++..++|++++++..++|++++++|+|||++++.|....+++...... .....++...
T Consensus 130 ~D~~~~~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~e 208 (261)
T 4gek_A 130 GDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELL-FNMHHDFKRANGYSELE 208 (261)
T ss_dssp SCTTTCCCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHH-HHHHHHHHHHTTGGGST
T ss_pred cccccccccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHH-HHHHHHHHHHcCCCHHH
Confidence 67777 66667999999999999999999999999999999999999998876653211000 0000000000
Q ss_pred ------ccCCCceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 74 ------TQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 74 ------~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
.....-...|.+++.++|++|||+.+++..-.-.+.-+.|+|
T Consensus 209 i~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 209 ISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp THHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 000001346889999999999999998754333344444554
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.42 E-value=1.1e-12 Score=87.78 Aligned_cols=112 Identities=16% Similarity=0.129 Sum_probs=78.7
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhc-------cch-
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQL-------DVL- 71 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~-------~l~- 71 (115)
||+.+ +.+. .|+|++..++|++++++..++|+++++.|+|||++++.+...++....... ....+ .+.
T Consensus 99 ~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 176 (234)
T 3dtn_A 99 ADYSKYDFEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENL--NKTIWRQYVENSGLTE 176 (234)
T ss_dssp SCTTTCCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHH--HHHHHHHHHHTSSCCH
T ss_pred CchhccCCCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhH--HHHHHHHHHHhcCCCH
Confidence 57766 4443 499999999999999988899999999999999999999887654211100 00000 000
Q ss_pred -----hcccCCCceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 72 -----MMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 72 -----~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
........+.+|.++|.++|++|||+.+++......++++-.+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 177 EEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp HHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 00001234567899999999999999999887776777765543
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.30 E-value=9.9e-12 Score=82.35 Aligned_cols=113 Identities=18% Similarity=0.262 Sum_probs=74.5
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhccc-CCC
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQ-NPS 78 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 78 (115)
||+.+ +.+. .|+|++..++|++++.+...+|+++++.|+|||++++.+...+...................... ...
T Consensus 96 ~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (220)
T 3hnr_A 96 GDFLSFEVPTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQT 175 (220)
T ss_dssp CCSSSCCCCSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CChhhcCCCCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcch
Confidence 67776 5543 59999999999999998888999999999999999999876654311100000000000000000 001
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
....|.++|.++|+++||+++.+ ...+..+++++.|
T Consensus 176 ~~~~~~~~~~~~l~~aGf~v~~~-~~~~~~w~~~~~~ 211 (220)
T 3hnr_A 176 EYYTRIPVMQTIFENNGFHVTFT-RLNHFVWVMEATK 211 (220)
T ss_dssp SCCCBHHHHHHHHHHTTEEEEEE-ECSSSEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHCCCEEEEe-eccceEEEEeehh
Confidence 12348899999999999976654 4457888887764
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.30 E-value=3e-11 Score=79.94 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=73.9
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++..++|++++. ..+|+++++.|+|||++++.+.........+ ..
T Consensus 95 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------~~ 155 (219)
T 3dh0_A 95 SEENKIPLPDNTVDFIFMAFTFHELSEP--LKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----------------PP 155 (219)
T ss_dssp CBTTBCSSCSSCEEEEEEESCGGGCSSH--HHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----------------CG
T ss_pred cccccCCCCCCCeeEEEeehhhhhcCCH--HHHHHHHHHHhCCCeEEEEEEecccccccCC-----------------ch
Confidence 56666 5554 4999999999999874 7999999999999999999987665542211 01
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
...++.++|.++++++||+.+++....+....+.++|
T Consensus 156 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 156 EEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp GGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred hcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 2235789999999999999999988877777666654
No 21
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=3.8e-11 Score=79.17 Aligned_cols=99 Identities=21% Similarity=0.191 Sum_probs=64.9
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
||+.+..+. .|+|++..++|++++++..++|+++++.|+|||++++.+...+............. ..+.-. ...+
T Consensus 97 ~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~ 173 (218)
T 3ou2_A 97 QDLFDWTPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPE-VAVRRT--LQDG 173 (218)
T ss_dssp CCTTSCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEE--CTTS
T ss_pred cccccCCCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccc-cceeee--cCCc
Confidence 566664443 49999999999999998899999999999999999999976643211100000000 000000 1122
Q ss_pred -------eeCCHHHHHHHHHhCCCCeeEEEE
Q 048196 80 -------KKRTKHEFLTLATGAGFSGTRFEW 103 (115)
Q Consensus 80 -------~~rt~~e~~~ll~~aGf~~~~~~~ 103 (115)
...|.++|.++|+++||++.....
T Consensus 174 ~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 174 RSFRIVKVFRSPAELTERLTALGWSCSVDEV 204 (218)
T ss_dssp CEEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred chhhHhhcCCCHHHHHHHHHHCCCEEEeeec
Confidence 235999999999999999544433
No 22
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.24 E-value=1.5e-11 Score=83.80 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=74.0
Q ss_pred CCCCC-CCCc-ccEEEecc-ccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch------------hhh--
Q 048196 2 DDMFQ-NVPK-GDAIFMKW-ILHNWSD-DHCLKLLKIYYKSIPEDGKVIVVESILPELPETST------------VSK-- 63 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~-vlh~~~d-~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~------------~~~-- 63 (115)
||+.+ +.+. .|+|++.. ++|++++ ++..++|+++++.|+|||+++|.+...++.-.... ...
T Consensus 100 ~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (263)
T 3pfg_A 100 GDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVS 179 (263)
T ss_dssp CCTTTCCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEE
T ss_pred CChHHCCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEE
Confidence 67777 4444 49999998 9999976 56789999999999999999996543333211000 000
Q ss_pred ------hchhccchhcccCCC-----------ceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 64 ------RNSQLDVLMMTQNPS-----------GKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 64 ------~~~~~~l~~~~~~~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
....+++.+.....+ .+.+|.+||.++|++|||+++++........++.++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 180 HSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 000111222111111 3446899999999999999988766556666666654
No 23
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=1.5e-11 Score=82.25 Aligned_cols=114 Identities=14% Similarity=0.079 Sum_probs=72.8
Q ss_pred CCCCC-CCCc-ccEEEe-ccccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchh------------hh--
Q 048196 2 DDMFQ-NVPK-GDAIFM-KWILHNWSD-DHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTV------------SK-- 63 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~-~~vlh~~~d-~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~------------~~-- 63 (115)
+|+.+ +.+. .|+|++ ..++|++++ ++..++|+++++.|+|||++++.+...++....... ..
T Consensus 90 ~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (239)
T 3bxo_A 90 GDMRDFRLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVS 169 (239)
T ss_dssp CCTTTCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEE
T ss_pred CCHHHcccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEE
Confidence 56666 4443 499995 559999865 678999999999999999999977655443211000 00
Q ss_pred ------hchhccchhcccCCCc-----------eeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 64 ------RNSQLDVLMMTQNPSG-----------KKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 64 ------~~~~~~l~~~~~~~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
......+.++....++ +.+|.++|.++|++|||++..+....+...++.++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 170 HSVREGNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEecCCCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 0000111222111111 346999999999999997666554456678888775
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.21 E-value=6.5e-11 Score=79.86 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=68.8
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++.+++|++++++..++|+++++.|+|||++++.+........ ..+. ...
T Consensus 147 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------~~~~-----~~~ 212 (254)
T 1xtp_A 147 ASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---------LVDK-----EDS 212 (254)
T ss_dssp SCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---------EEET-----TTT
T ss_pred ccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---------eecc-----cCC
Confidence 46655 4553 49999999999999988999999999999999999999875443210 0110 123
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
...++.++|.++|+++||+++++....
T Consensus 213 ~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 213 SLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred cccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 456899999999999999999887654
No 25
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=6.5e-11 Score=77.57 Aligned_cols=97 Identities=11% Similarity=0.053 Sum_probs=72.4
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.+ +.+. .|+|++..++|++++++..++|+++++.|+|||++++.+...+... . +.- . ...
T Consensus 91 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~--------~~~--~--~~~ 156 (203)
T 3h2b_A 91 GTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLE--P--------MYH--P--VAT 156 (203)
T ss_dssp CCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE--E--------ECC--S--SSC
T ss_pred CcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchh--h--------hhc--h--hhh
Confidence 56666 5553 4999999999999987889999999999999999999876544311 0 000 0 124
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcC-CceEEEE
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFT-CNLWVRD 112 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~lie 112 (115)
...++.++|.++|+++||+++++...+ .++..+.
T Consensus 157 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~ 191 (203)
T 3h2b_A 157 AYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLT 191 (203)
T ss_dssp EEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEE
T ss_pred hccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhh
Confidence 456799999999999999999987765 3444443
No 26
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.19 E-value=1e-10 Score=78.73 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=69.7
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +.+. .|+|++.+++|++++++..++|+++++.|+|||++++.+...+. .. .++- ..+
T Consensus 135 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~-------~~~~-----~~~ 199 (241)
T 2ex4_A 135 CGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE---GV-------ILDD-----VDS 199 (241)
T ss_dssp CCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS---SE-------EEET-----TTT
T ss_pred cChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC---cc-------eecc-----cCC
Confidence 45555 3443 49999999999999988889999999999999999999987664 11 0110 124
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
...++.++|.++|+++||+++++....
T Consensus 200 ~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 200 SVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp EEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred cccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 455799999999999999999887664
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.19 E-value=4.9e-12 Score=83.32 Aligned_cols=109 Identities=13% Similarity=0.151 Sum_probs=71.3
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchh-ccchhcccCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQ-LDVLMMTQNP 77 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 77 (115)
+|+.+ +++. .|+|++..++|++++. .++|+++++.|+|||++++.+...+.............. ........ .
T Consensus 100 ~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 176 (219)
T 3dlc_A 100 GDVHNIPIEDNYADLIVSRGSVFFWEDV--ATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNR-K 176 (219)
T ss_dssp CBTTBCSSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHH-H
T ss_pred cCHHHCCCCcccccEEEECchHhhccCH--HHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhh-h
Confidence 56666 5653 4999999999999764 689999999999999999987544331100000000000 00000000 1
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEE
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDF 113 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~ 113 (115)
+...+|.++|.++|+++||+.+++.......+++-.
T Consensus 177 ~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~ 212 (219)
T 3dlc_A 177 NISQENVERFQNVLDEIGISSYEIILGDEGFWIIIS 212 (219)
T ss_dssp HSSHHHHHHHHHHHHHHTCSSEEEEEETTEEEEEEB
T ss_pred ccccCCHHHHHHHHHHcCCCeEEEEecCCceEEEEe
Confidence 233457899999999999999999887776666543
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.17 E-value=8.7e-11 Score=79.56 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=71.0
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +.+. .|+|++..++|++++++..++|+++++.|+|||++++.+...+...... ..+.-... ..+
T Consensus 109 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------~~~~~~~~--~~~ 180 (266)
T 3ujc_A 109 NDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWD------DEFKEYVK--QRK 180 (266)
T ss_dssp CCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCC------HHHHHHHH--HHT
T ss_pred CccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccch------HHHHHHHh--cCC
Confidence 57766 5653 4999999999999988899999999999999999999998766521111 00110101 113
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...++.++|.++++++||+.+++...
T Consensus 181 ~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 181 YTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 34578999999999999999887765
No 29
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.16 E-value=3.6e-11 Score=79.81 Aligned_cols=113 Identities=12% Similarity=-0.019 Sum_probs=74.0
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhh-hhc-hhccchhccc-
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVS-KRN-SQLDVLMMTQ- 75 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~-~~~-~~~~l~~~~~- 75 (115)
+|+.+ +++. .|+|++..++|.+..++..++|+++++.|+|||++++.+...+......... ... ..+...+...
T Consensus 92 ~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (227)
T 1ve3_A 92 GDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQ 171 (227)
T ss_dssp CCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEET
T ss_pred CchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCc
Confidence 67777 5553 4999999998888888889999999999999999999887533210000000 000 0000000000
Q ss_pred --------C-C-------CceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 76 --------N-P-------SGKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 76 --------~-~-------~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
. . .....+ .+|.++|+++||+.+++..+.....+++++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 172 EERTVVIEFKSEQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp TTTEEEEEC-----CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred cccEEEEEeccchhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 0 0 011122 4899999999999999999887888999876
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.14 E-value=1.8e-10 Score=79.61 Aligned_cols=93 Identities=14% Similarity=0.140 Sum_probs=68.8
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.+ +++. .|+|++..++|++++ ..++|+++++.|+|||++++.+............ ...+... ..
T Consensus 139 ~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~~~-----~~ 208 (297)
T 2o57_A 139 GSFLEIPCEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSI---QPILDRI-----KL 208 (297)
T ss_dssp CCTTSCSSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGG---HHHHHHH-----TC
T ss_pred cCcccCCCCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHH---HHHHHHh-----cC
Confidence 67777 6654 399999999999998 5899999999999999999999877654322111 1111111 11
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
....+.++|.++++++||+++++...
T Consensus 209 ~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 209 HDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp SSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 23468999999999999999888764
No 31
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.14 E-value=3.7e-10 Score=77.68 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=70.4
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCC-----Cchhhhhchhccchhccc
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPE-----TSTVSKRNSQLDVLMMTQ 75 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~-----~~~~~~~~~~~~l~~~~~ 75 (115)
+|+.+ +|. .|+|++..++|++++++..++|+++++.|+|||++++.+...+.... .+.........+......
T Consensus 121 ~d~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (287)
T 1kpg_A 121 AGWEQ-FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEI 199 (287)
T ss_dssp SCGGG-CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHT
T ss_pred CChhh-CCCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHhee
Confidence 34433 343 59999999999998777899999999999999999999987654211 000000000001000111
Q ss_pred CCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 76 NPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 76 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.+++..+|.++|.++++++||+++++...
T Consensus 200 ~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 200 FPGGRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp STTCCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 35677789999999999999999988765
No 32
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.14 E-value=1.5e-10 Score=78.69 Aligned_cols=96 Identities=15% Similarity=0.239 Sum_probs=67.7
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.+ +++. .|+|++..++|+++|. .++|++++++|+|||++++.+...++.+. ........ ..+.....
T Consensus 92 ~d~~~l~~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~ 164 (260)
T 1vl5_A 92 GDAEQMPFTDERFHIVTCRIAAHHFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPENDA---FDVFYNYV--EKERDYSH 164 (260)
T ss_dssp CCC-CCCSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCSSHH---HHHHHHHH--HHHHCTTC
T ss_pred ecHHhCCCCCCCEEEEEEhhhhHhcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCCCHH---HHHHHHHH--HHhcCccc
Confidence 56666 6663 4999999999999986 69999999999999999999987664311 11110101 11111123
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.+.++.++|.++|+++||+.+++...
T Consensus 165 ~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 165 HRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp CCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 45678999999999999998776544
No 33
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.12 E-value=2.3e-10 Score=76.64 Aligned_cols=85 Identities=19% Similarity=0.180 Sum_probs=67.4
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.+..+. .|+|++..++|++++++..++|+++++.|+|||++++.+.........+ .
T Consensus 122 ~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-------------------~ 182 (235)
T 3lcc_A 122 EDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP-------------------P 182 (235)
T ss_dssp CCTTTCCCSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS-------------------S
T ss_pred CchhcCCCCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC-------------------C
Confidence 677773343 4999999999999988889999999999999999999886554332111 1
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
...+.++|.++|+++||+++++....
T Consensus 183 ~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 183 YKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp CCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred ccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 12678999999999999999887764
No 34
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.12 E-value=4.5e-10 Score=78.19 Aligned_cols=114 Identities=17% Similarity=0.114 Sum_probs=72.5
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHH-HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-hh--hhch------hcc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDH-CLKLLKIYYKSIPEDGKVIVVESILPELPETST-VS--KRNS------QLD 69 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~-~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~-~~--~~~~------~~~ 69 (115)
||+.+ +.+. .|+|++..++|++++.+ ..++++++++.|+|||++++.+...+....... +. .... ...
T Consensus 177 ~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 256 (305)
T 3ocj_A 177 QDAWKLDTREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLV 256 (305)
T ss_dssp CCGGGCCCCSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHH
T ss_pred CchhcCCccCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhH
Confidence 56666 4454 49999999999997654 567999999999999999998866544322110 00 0000 000
Q ss_pred chhcccCCCceeCCHHHHHHHHHhCCCCeeEEEEcC-CceEEEEEEC
Q 048196 70 VLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFT-CNLWVRDFYK 115 (115)
Q Consensus 70 l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~lie~~~ 115 (115)
+.......-...++.++|.++|+++||+++++.... .....+.++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 257 FTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 000100001134799999999999999999888654 3444555554
No 35
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.11 E-value=2.5e-10 Score=77.89 Aligned_cols=96 Identities=16% Similarity=0.091 Sum_probs=70.1
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++..++|++++. .++|+++++.|+|||++++.+.......... .. ..++..... .+.
T Consensus 118 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~---~~~~~~~~~-~~~ 190 (273)
T 3bus_A 118 ADAMDLPFEDASFDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGA-KK---EAVDAFRAG-GGV 190 (273)
T ss_dssp CCTTSCCSCTTCEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHH-HH---HHHHHHHHH-HTC
T ss_pred CccccCCCCCCCccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChh-HH---HHHHHHHhh-cCc
Confidence 57766 5654 3999999999999875 7999999999999999999998776432211 00 011111011 135
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
+..++.++|.++++++||+++++...
T Consensus 191 ~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 191 LSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 56789999999999999999887765
No 36
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.11 E-value=2.2e-10 Score=79.46 Aligned_cols=114 Identities=8% Similarity=0.081 Sum_probs=73.6
Q ss_pred CCCCC-CCCc-ccEEEec-cccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc-----hh----hh---h--
Q 048196 2 DDMFQ-NVPK-GDAIFMK-WILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETS-----TV----SK---R-- 64 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~-----~~----~~---~-- 64 (115)
||+.+ +.+. .|+|++. .++|++++++..++|+++++.|+|||++++.....+...... .. .. .
T Consensus 140 ~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 219 (299)
T 3g2m_A 140 GDMSAFALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHV 219 (299)
T ss_dssp CBTTBCCCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCE
T ss_pred CchhcCCcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEE
Confidence 57776 4444 4988865 788888888899999999999999999999776543210000 00 00 0
Q ss_pred -----chhccchhcc----------cCCCceeCCHHHHHHHHHhCCCCeeEEEEcC------CceEEEEEEC
Q 048196 65 -----NSQLDVLMMT----------QNPSGKKRTKHEFLTLATGAGFSGTRFEWFT------CNLWVRDFYK 115 (115)
Q Consensus 65 -----~~~~~l~~~~----------~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~------~~~~lie~~~ 115 (115)
.....+.+.. .....+.+|.+||.++|++|||+++++.++. ....++|+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 220 RHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp EEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred EEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 0000011000 0012235799999999999999999998875 2357888753
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.09 E-value=2.6e-10 Score=76.78 Aligned_cols=96 Identities=15% Similarity=0.246 Sum_probs=67.7
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++..++|+++|. .++|+++++.|+|||++++.+...++... ....... +..+....+
T Consensus 76 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~ 148 (239)
T 1xxl_A 76 GTAESLPFPDDSFDIITCRYAAHHFSDV--RKAVREVARVLKQDGRFLLVDHYAPEDPV---LDEFVNH--LNRLRDPSH 148 (239)
T ss_dssp CBTTBCCSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECBCSSHH---HHHHHHH--HHHHHCTTC
T ss_pred cccccCCCCCCcEEEEEECCchhhccCH--HHHHHHHHHHcCCCcEEEEEEcCCCCChh---HHHHHHH--HHHhccccc
Confidence 45655 4553 4999999999999875 68999999999999999999987664311 1111111 111111123
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.+.++.++|.++|+++||+.+++...
T Consensus 149 ~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 149 VRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 45678999999999999998876554
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.06 E-value=5.2e-10 Score=73.70 Aligned_cols=88 Identities=14% Similarity=0.069 Sum_probs=64.8
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.+ +.+. .|+|++..++|++++++..++|+++++.|+|||++++........... ... ...
T Consensus 92 ~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~-------~~~ 156 (211)
T 3e23_A 92 MLFHQLDAIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD--------KLA-------RYY 156 (211)
T ss_dssp CCGGGCCCCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC--------TTS-------CEE
T ss_pred eeeccCCCCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc--------ccc-------hhc
Confidence 45555 3223 499999999999998889999999999999999999975433221000 000 112
Q ss_pred eeCCHHHHHHHHHhCC-CCeeEEEEc
Q 048196 80 KKRTKHEFLTLATGAG-FSGTRFEWF 104 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aG-f~~~~~~~~ 104 (115)
..++.++|.++|+++| |+++++...
T Consensus 157 ~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 157 NYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp CCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred cCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 3468999999999999 999987654
No 39
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.06 E-value=2.9e-10 Score=75.59 Aligned_cols=100 Identities=15% Similarity=0.082 Sum_probs=67.2
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChH-HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhccc--
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDD-HCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQ-- 75 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~-- 75 (115)
+|+.+ +.+. .|+|++..++|++++. +..++|+++++.|+|||++++.+........ .... .....+.....
T Consensus 90 ~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~ 166 (235)
T 3sm3_A 90 ENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK--LYRK-RYLHDFPITKEEG 166 (235)
T ss_dssp CCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH--HHHH-HHHHHHHHHCSTT
T ss_pred ecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH--HHHH-Hhhhhccchhhhc
Confidence 45655 4543 4999999999999864 4779999999999999999999876543211 0000 00000000000
Q ss_pred ------------CCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 76 ------------NPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 76 ------------~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
....+.+|.++|.++|+++||+++++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 167 SFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred ceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 00124679999999999999999887543
No 40
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.05 E-value=6.3e-10 Score=70.94 Aligned_cols=83 Identities=12% Similarity=0.105 Sum_probs=65.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++..++|++++. .++++++++.|+|||++++.+.........+. ....++.++|.++
T Consensus 76 ~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 136 (170)
T 3i9f_A 76 VDFILFANSFHDMDDK--QHVISEVKRILKDDGRVIIIDWRKENTGIGPP-----------------LSIRMDEKDYMGW 136 (170)
T ss_dssp EEEEEEESCSTTCSCH--HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC-----------------GGGCCCHHHHHHH
T ss_pred eEEEEEccchhcccCH--HHHHHHHHHhcCCCCEEEEEEcCccccccCch-----------------HhhhcCHHHHHHH
Confidence 4999999999999864 69999999999999999999877654322210 1222689999999
Q ss_pred HHhCCCCeeEEEEcCCceEEEEEE
Q 048196 91 ATGAGFSGTRFEWFTCNLWVRDFY 114 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~~~~lie~~ 114 (115)
|+ ||+.+++.........+.+.
T Consensus 137 l~--Gf~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 137 FS--NFVVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp TT--TEEEEEEECSSTTEEEEEEE
T ss_pred Hh--CcEEEEccCCCCceEEEEEe
Confidence 99 99999998887666666554
No 41
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.03 E-value=1.3e-09 Score=72.93 Aligned_cols=93 Identities=15% Similarity=0.062 Sum_probs=66.4
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +.+. .|+|++..++|++++. .++|+++++.|+|||++++.+.......... .....+. . ...
T Consensus 105 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---~~~~~~~----~-~~~ 174 (242)
T 3l8d_A 105 GDLSSLPFENEQFEAIMAINSLEWTEEP--LRALNEIKRVLKSDGYACIAILGPTAKPREN---SYPRLYG----K-DVV 174 (242)
T ss_dssp CBTTBCSSCTTCEEEEEEESCTTSSSCH--HHHHHHHHHHEEEEEEEEEEEECTTCGGGGG---GGGGGGT----C-CCS
T ss_pred cchhcCCCCCCCccEEEEcChHhhccCH--HHHHHHHHHHhCCCeEEEEEEcCCcchhhhh---hhhhhcc----c-ccc
Confidence 56666 5553 4999999999999875 6899999999999999999886444321111 1111111 1 123
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...++.+++.++++++||++++...+
T Consensus 175 ~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 175 CNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp SCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 45578999999999999999987654
No 42
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.03 E-value=1.3e-09 Score=76.10 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=67.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc----hhh-hhchhccchhcccCCCceeCCHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETS----TVS-KRNSQLDVLMMTQNPSGKKRTKH 85 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~----~~~-~~~~~~~l~~~~~~~~g~~rt~~ 85 (115)
.|+|++..++|++++++..++|+++++.|+|||++++.+...+...... ... ......+.......+++..+|.+
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 235 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTE 235 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHH
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHH
Confidence 5999999999999987789999999999999999999998766431100 000 00000011100112467778999
Q ss_pred HHHHHHHhCCCCeeEEEEc
Q 048196 86 EFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 86 e~~~ll~~aGf~~~~~~~~ 104 (115)
+|.++++++||+++++...
T Consensus 236 ~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 236 MMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHHHHHTTCBCCCCEEC
T ss_pred HHHHHHHhCCCEEEEEEec
Confidence 9999999999999887654
No 43
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.99 E-value=3.9e-09 Score=70.54 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=68.2
Q ss_pred CCCCC-CCCc-ccEEEecc-ccccC-ChHHHHHHHHHHHhhCCCCCEEEEEeeecC-------CC-----CCC-c-hhh-
Q 048196 2 DDMFQ-NVPK-GDAIFMKW-ILHNW-SDDHCLKLLKIYYKSIPEDGKVIVVESILP-------EL-----PET-S-TVS- 62 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~-vlh~~-~d~~~~~iL~~~~~aL~pgg~lii~d~~~~-------~~-----~~~-~-~~~- 62 (115)
+|+.+ +.+. .|+|++.. ++|++ +.++..++|+++++.|+|||++++.-.... +. ... . .+.
T Consensus 86 ~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (243)
T 3d2l_A 86 QDMRELELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFA 165 (243)
T ss_dssp CCGGGCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEE
T ss_pred cChhhcCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEe
Confidence 45555 4444 49999986 99998 556789999999999999999987321110 00 000 0 000
Q ss_pred -----hhchhccchhcccCCC-----------ceeCCHHHHHHHHHhCCCCeeEEEEcC--------CceEEEEEEC
Q 048196 63 -----KRNSQLDVLMMTQNPS-----------GKKRTKHEFLTLATGAGFSGTRFEWFT--------CNLWVRDFYK 115 (115)
Q Consensus 63 -----~~~~~~~l~~~~~~~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~--------~~~~lie~~~ 115 (115)
......++.+.....+ .+.+|.+++.++|++|||+++++.... ....++.++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 166 DPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp EECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred ecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence 0000011111111111 145799999999999999999887541 2345666664
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.98 E-value=1.6e-09 Score=75.56 Aligned_cols=93 Identities=10% Similarity=0.047 Sum_probs=67.9
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.+ +++. .|+|++..++|+++ ..++|+++++.|+|||++++.+....+...... . ....++-.. .
T Consensus 174 ~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~-~~~~~~~~~-----~ 243 (312)
T 3vc1_A 174 CNMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPS-K-WVSQINAHF-----E 243 (312)
T ss_dssp CCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCC-H-HHHHHHHHH-----T
T ss_pred CChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchh-H-HHHHHHhhh-----c
Confidence 67777 5553 49999999999994 689999999999999999999987776432110 0 001111111 1
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...++.++|.++|+++||+++++..+
T Consensus 244 ~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 244 CNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp CCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 13578999999999999999888765
No 45
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.98 E-value=2.6e-09 Score=71.70 Aligned_cols=84 Identities=13% Similarity=0.279 Sum_probs=63.3
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++..++|++++++..++|+++++.|+|||++++........ .. . .+.. . ...+....+.++|.++
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~-~---~~~~-~-~~~~~~~~~~~~l~~~ 170 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL-----YS-L---INFY-I-DPTHKKPVHPETLKFI 170 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH-----HH-H---HHHT-T-STTCCSCCCHHHHHHH
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh-----HH-H---HHHh-c-CccccccCCHHHHHHH
Confidence 499999999999998888999999999999999999976542211 11 0 1111 1 1123456789999999
Q ss_pred HHhCCCCeeEEEEcC
Q 048196 91 ATGAGFSGTRFEWFT 105 (115)
Q Consensus 91 l~~aGf~~~~~~~~~ 105 (115)
++++||+++++....
T Consensus 171 l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 171 LEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHCCCeEEEEEEec
Confidence 999999998887654
No 46
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.97 E-value=1.6e-09 Score=72.47 Aligned_cols=114 Identities=11% Similarity=-0.013 Sum_probs=69.0
Q ss_pred CCCCC-CCCc-ccEEEecc-ccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeeecCCC----CCCc----------hhhh
Q 048196 2 DDMFQ-NVPK-GDAIFMKW-ILHNWSD-DHCLKLLKIYYKSIPEDGKVIVVESILPEL----PETS----------TVSK 63 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~-vlh~~~d-~~~~~iL~~~~~aL~pgg~lii~d~~~~~~----~~~~----------~~~~ 63 (115)
+|+.+ +.+. .|+|++.. ++|++++ ++..++|+++++.|+|||++++.-...... +... ....
T Consensus 91 ~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (246)
T 1y8c_A 91 QDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWEN 170 (246)
T ss_dssp CCGGGCCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEE
T ss_pred cccccCCccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEec
Confidence 56655 4443 49999998 9999954 678999999999999999998733211000 0000 0000
Q ss_pred ----hchhccchhcccC----------CCceeCCHHHHHHHHHhCCCCeeEEEEc--------CCceEEEEEEC
Q 048196 64 ----RNSQLDVLMMTQN----------PSGKKRTKHEFLTLATGAGFSGTRFEWF--------TCNLWVRDFYK 115 (115)
Q Consensus 64 ----~~~~~~l~~~~~~----------~~g~~rt~~e~~~ll~~aGf~~~~~~~~--------~~~~~lie~~~ 115 (115)
......+.++... ...+.+|.++|.++|+++||+++++... .....++.++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 171 QFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred ccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 0000111111100 0124569999999999999999988654 12445666654
No 47
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.97 E-value=1.4e-09 Score=71.79 Aligned_cols=84 Identities=20% Similarity=0.177 Sum_probs=65.0
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +.+. .|+|++..++| +++ ..++|+++++.|+|||++++.+....
T Consensus 104 ~d~~~~~~~~~~fD~v~~~~~l~-~~~--~~~~l~~~~~~L~~gG~l~i~~~~~~------------------------- 155 (215)
T 2zfu_A 104 CDMAQVPLEDESVDVAVFCLSLM-GTN--IRDFLEEANRVLKPGGLLKVAEVSSR------------------------- 155 (215)
T ss_dssp SCTTSCSCCTTCEEEEEEESCCC-SSC--HHHHHHHHHHHEEEEEEEEEEECGGG-------------------------
T ss_pred eccccCCCCCCCEeEEEEehhcc-ccC--HHHHHHHHHHhCCCCeEEEEEEcCCC-------------------------
Confidence 56666 5553 49999999998 444 57999999999999999999863210
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
..+.++|.++++++||++++.....+...++.++|
T Consensus 156 --~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 156 --FEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp --CSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEE
T ss_pred --CCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEe
Confidence 02789999999999999988766566677777664
No 48
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.97 E-value=2.2e-09 Score=72.42 Aligned_cols=93 Identities=11% Similarity=0.020 Sum_probs=67.0
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
||+.+ +.+. .|+|++..++|++++ ..++|+++++.|+|||++++.+......+.... ....+ .. ....
T Consensus 93 ~d~~~~~~~~~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~---~~~~~----~~-~~~~ 162 (256)
T 1nkv_A 93 NDAAGYVANEKCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEE---IAQAC----GV-SSTS 162 (256)
T ss_dssp SCCTTCCCSSCEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHH---HHHTT----TC-SCGG
T ss_pred CChHhCCcCCCCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHH---HHHHH----hc-cccc
Confidence 56666 3333 499999999999986 479999999999999999999987665433211 11101 00 1123
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
..++.++|.++|+++||+.+++...
T Consensus 163 ~~~~~~~~~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 163 DFLTLPGLVGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp GSCCHHHHHHHHHTTTBCCCEEEEC
T ss_pred ccCCHHHHHHHHHHCCCeeEEEEeC
Confidence 5578999999999999999887543
No 49
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.97 E-value=1.2e-09 Score=75.53 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=60.5
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHH
Q 048196 10 KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLT 89 (115)
Q Consensus 10 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ 89 (115)
..|+|++..++|+++|++..++|++++++|+|||++++.+...+. ..... ...+...... ...+.||.+||.+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~---~~~~~---~~~~~~~~~~-~~~~~~s~~ei~~ 229 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG---LPAQQ---KLARITRENL-GEGWARTPEEIER 229 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS---CHHHH---HHHHHHHHHH-SCCCCBCHHHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc---hHHHH---HHHHHHHhcC-CCCccCCHHHHHH
Confidence 359999999999999988899999999999999999999977542 11111 1112111111 1456799999999
Q ss_pred HHHhCCCCeeE
Q 048196 90 LATGAGFSGTR 100 (115)
Q Consensus 90 ll~~aGf~~~~ 100 (115)
+| +||++++
T Consensus 230 ~l--~G~~l~~ 238 (274)
T 2qe6_A 230 QF--GDFELVE 238 (274)
T ss_dssp TT--TTCEECT
T ss_pred Hh--CCCeEcc
Confidence 99 5998765
No 50
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.96 E-value=7.5e-10 Score=75.68 Aligned_cols=98 Identities=20% Similarity=0.273 Sum_probs=66.3
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC---CCCchhhh-hchhccchhcc
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPEL---PETSTVSK-RNSQLDVLMMT 74 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~---~~~~~~~~-~~~~~~l~~~~ 74 (115)
+|+.+ +.+. .|+|++++++|+++|. ..+|+++++.|+|||.+++.+...... +..+.... ...... ...
T Consensus 94 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 169 (276)
T 3mgg_A 94 ANIFSLPFEDSSFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR--VQA 169 (276)
T ss_dssp CCGGGCCSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH--HHH
T ss_pred cccccCCCCCCCeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH--HHH
Confidence 46665 4443 4999999999999986 489999999999999999998644221 11111110 011111 111
Q ss_pred cCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 75 QNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 75 ~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
. .++..++..+|.++|++|||+.+++...
T Consensus 170 ~-~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 170 Y-MKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp H-TTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred h-cCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 1 2455677889999999999999887654
No 51
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.96 E-value=1.7e-09 Score=72.22 Aligned_cols=101 Identities=15% Similarity=0.075 Sum_probs=64.4
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHH-hhCCCCCEEEEEeeecCCCCCCch--hhhhchhccch-hccc
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYY-KSIPEDGKVIVVESILPELPETST--VSKRNSQLDVL-MMTQ 75 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~-~aL~pgg~lii~d~~~~~~~~~~~--~~~~~~~~~l~-~~~~ 75 (115)
+|+.+..+. .|+|++.+++|+++|. .++|++++ +.|+|||++++.++.......... .........+. ....
T Consensus 93 ~d~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (250)
T 2p7i_A 93 SRFEDAQLPRRYDNIVLTHVLEHIDDP--VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFA 170 (250)
T ss_dssp SCGGGCCCSSCEEEEEEESCGGGCSSH--HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHH
T ss_pred ccHHHcCcCCcccEEEEhhHHHhhcCH--HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhccccccc
Confidence 455443333 4999999999999886 69999999 999999999998754331100000 00000000000 0001
Q ss_pred CCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 76 NPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 76 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
....+.+|.++|.++|+++||+++++...
T Consensus 171 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 171 HGHRCTYALDTLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp TTCCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccccCCHHHHHHHHHHCCCeEEEEeee
Confidence 12345689999999999999999887643
No 52
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.95 E-value=2.2e-09 Score=77.17 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=62.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++..++|+++|. .++|+++++.|+|||++++.+...+...... .. ....... ...+...+.++|.++
T Consensus 167 fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~-----~~~~~~~-~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 167 VDIVISNCVCNLSTNK--LALFKEIHRVLRDGGELYFSDVYADRRLSEA-AQ-----QDPILYG-ECLGGALYLEDFRRL 237 (383)
T ss_dssp EEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEESSCCCHH-HH-----HCHHHHH-TTCTTCCBHHHHHHH
T ss_pred EEEEEEccchhcCCCH--HHHHHHHHHHcCCCCEEEEEEeccccccCHh-Hh-----hhHHHhh-cccccCCCHHHHHHH
Confidence 4999999999999884 7999999999999999999998766432211 10 0111111 123456788999999
Q ss_pred HHhCCCCeeEEEE
Q 048196 91 ATGAGFSGTRFEW 103 (115)
Q Consensus 91 l~~aGf~~~~~~~ 103 (115)
|+++||+.+++..
T Consensus 238 l~~aGF~~v~~~~ 250 (383)
T 4fsd_A 238 VAEAGFRDVRLVS 250 (383)
T ss_dssp HHHTTCCCEEEEE
T ss_pred HHHCCCceEEEEe
Confidence 9999999886644
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.93 E-value=5.9e-09 Score=72.30 Aligned_cols=95 Identities=16% Similarity=0.315 Sum_probs=67.3
Q ss_pred ccEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhh-----hchhccchhcccCCC
Q 048196 11 GDAIFMKWILHNWSD-------DHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSK-----RNSQLDVLMMTQNPS 78 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~ 78 (115)
.|+|++..++|+++| +...++++++++.|+|||++++.+...++......... .....+.......++
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 217 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPG 217 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTT
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCC
Confidence 599999999999955 56789999999999999999999987664321000000 000001111112357
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
+..++.+++.++++++||+++++...+
T Consensus 218 ~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 218 GRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 788999999999999999999887654
No 54
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.91 E-value=4.3e-09 Score=69.82 Aligned_cols=95 Identities=15% Similarity=0.085 Sum_probs=65.0
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +.+. .|+|++..++|++++. .++|+++++.|+|||++++.+...... ............. ....
T Consensus 91 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~-----~~~~~~~~~~~~~-~~~~ 162 (219)
T 1vlm_A 91 GTAENLPLKDESFDFALMVTTICFVDDP--ERALKEAYRILKKGGYLIVGIVDRESF-----LGREYEKNKEKSV-FYKN 162 (219)
T ss_dssp CBTTBCCSCTTCEEEEEEESCGGGSSCH--HHHHHHHHHHEEEEEEEEEEEECSSSH-----HHHHHHHTTTC-C-CSTT
T ss_pred cccccCCCCCCCeeEEEEcchHhhccCH--HHHHHHHHHHcCCCcEEEEEEeCCccH-----HHHHHHHHhcCcc-hhcc
Confidence 45555 4543 4999999999999875 689999999999999999987643211 1111000000000 1123
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...++.++|.++|+++||+++++...
T Consensus 163 ~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 163 ARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccCCHHHHHHHHHHCCCeEEEEecc
Confidence 45679999999999999999887665
No 55
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.90 E-value=3e-09 Score=71.84 Aligned_cols=92 Identities=12% Similarity=0.025 Sum_probs=66.3
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +.+. .|+|++..++|+++ ..++|+++++.|+|||++++.+........... ....+. .. .
T Consensus 103 ~d~~~~~~~~~~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~---~~~~~~---~~---~ 170 (257)
T 3f4k_A 103 GSMDNLPFQNEELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAE---IEDFWM---DA---Y 170 (257)
T ss_dssp CCTTSCSSCTTCEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHH---HHHHHH---HH---C
T ss_pred CChhhCCCCCCCEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHH---HHHHHH---Hh---C
Confidence 56765 5553 49999999999994 468999999999999999999986554332211 111111 00 1
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
...+|.++|.++|+++||+++++...+
T Consensus 171 ~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 171 PEISVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp TTCCBHHHHHHHHHHTTEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEEECC
Confidence 225689999999999999999887664
No 56
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.89 E-value=6.7e-09 Score=69.39 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=63.5
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC--CCCCchh----h----hhchhc
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPE--LPETSTV----S----KRNSQL 68 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~--~~~~~~~----~----~~~~~~ 68 (115)
+|+.+ +.+. .|+|++..++|++++ ..++|+++++.|+|||++++....... ....... . .....+
T Consensus 96 ~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (243)
T 3bkw_A 96 ADLDKLHLPQDSFDLAYSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYL 173 (243)
T ss_dssp CCGGGCCCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTT
T ss_pred cChhhccCCCCCceEEEEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccc
Confidence 46655 4543 499999999999986 479999999999999999997753210 0000000 0 000000
Q ss_pred -----cchhcccCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 69 -----DVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 69 -----~l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
....+........+|.++|.++|++|||+++++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 174 VEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred cccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 000000001233479999999999999999988764
No 57
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.89 E-value=3.3e-09 Score=69.47 Aligned_cols=99 Identities=5% Similarity=-0.102 Sum_probs=66.7
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhch-hccchhcccCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNS-QLDVLMMTQNP 77 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 77 (115)
+|+.+ +.+. .|+|++..++|+++.++..++++++++.|+|||++++.+...++.+..... .... .+.........
T Consensus 78 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 156 (209)
T 2p8j_A 78 GDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGE-KIGEGEFLQLERGEKV 156 (209)
T ss_dssp CCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSE-EEETTEEEECC-CCCE
T ss_pred CchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchh-hhccccceeccCCCce
Confidence 56666 5553 499999999999998889999999999999999999998876554321100 0000 01000000001
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEE
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~ 101 (115)
.+..++.+|+.++|+++||...+.
T Consensus 157 ~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 157 IHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp EEEEECHHHHHHTTTTSEEEEEEE
T ss_pred eEEecCHHHHHHHHhhcCceeeee
Confidence 235679999999999999876654
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.89 E-value=5.6e-09 Score=71.36 Aligned_cols=80 Identities=13% Similarity=0.001 Sum_probs=57.7
Q ss_pred ccEEEeccccccC-C-hHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHH
Q 048196 11 GDAIFMKWILHNW-S-DDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFL 88 (115)
Q Consensus 11 ~D~v~~~~vlh~~-~-d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~ 88 (115)
.|+|+++.+||+. + .++..++|+++++.|+|||++++.+...... + . .. . .. ......|.++|.
T Consensus 157 fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-----~---~--~g-~-~~--~~~~~~~~~~l~ 222 (263)
T 2a14_A 157 ADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-----Y---M--VG-K-RE--FSCVALEKGEVE 222 (263)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-----E---E--ET-T-EE--EECCCCCHHHHH
T ss_pred CCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-----c---e--eC-C-eE--eeccccCHHHHH
Confidence 5999999999985 3 3567899999999999999999987542210 0 0 00 0 00 011235899999
Q ss_pred HHHHhCCCCeeEEEEc
Q 048196 89 TLATGAGFSGTRFEWF 104 (115)
Q Consensus 89 ~ll~~aGf~~~~~~~~ 104 (115)
++|+++||+++++...
T Consensus 223 ~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 223 QAVLDAGFDIEQLLHS 238 (263)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCEEEEEeec
Confidence 9999999999887654
No 59
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.88 E-value=3.9e-09 Score=71.23 Aligned_cols=100 Identities=11% Similarity=0.086 Sum_probs=62.8
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC------------CCCCCchhhhhch
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP------------ELPETSTVSKRNS 66 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~------------~~~~~~~~~~~~~ 66 (115)
+|+.+ +.+. .|+|++..++|++++ ..++|+++++.|+|||++++...... ......... ...
T Consensus 97 ~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 173 (253)
T 3g5l_A 97 KAIEDIAIEPDAYNVVLSSLALHYIAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWP-VDR 173 (253)
T ss_dssp CCGGGCCCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEE-ECC
T ss_pred cchhhCCCCCCCeEEEEEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEE-ecc
Confidence 56655 5553 499999999999976 47999999999999999999754211 000000000 000
Q ss_pred hcc-----chhcccCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 67 QLD-----VLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 67 ~~~-----l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.++ ............+|.++|.++|++|||+++++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 174 YFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp TTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred ccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 000 00000000122359999999999999999988754
No 60
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.88 E-value=3.7e-09 Score=67.85 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=50.7
Q ss_pred ccEEEeccccccC-ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHH
Q 048196 11 GDAIFMKWILHNW-SDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLT 89 (115)
Q Consensus 11 ~D~v~~~~vlh~~-~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ 89 (115)
.|+|++.+++|++ +|. .++|+++++.|+|||++++.+........ ....++.++|.+
T Consensus 64 fD~V~~~~~l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 121 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVDN--------------------NSKVKTASKLCS 121 (176)
T ss_dssp EEEEEECCSTTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSCS--------------------SSSSCCHHHHHH
T ss_pred EeEEEECChhhhcccCH--HHHHHHHHHHCCCCEEEEEEccccccccc--------------------ccccCCHHHHHH
Confidence 4999999999999 664 78999999999999999996654332100 112367899999
Q ss_pred HHHhCCC
Q 048196 90 LATGAGF 96 (115)
Q Consensus 90 ll~~aGf 96 (115)
+|+++||
T Consensus 122 ~l~~aGf 128 (176)
T 2ld4_A 122 ALTLSGL 128 (176)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 9999999
No 61
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.85 E-value=5e-09 Score=71.38 Aligned_cols=92 Identities=14% Similarity=-0.001 Sum_probs=66.6
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++..++|+++ ..++|+++++.|+|||++++.+........... ....+. - ..
T Consensus 103 ~d~~~~~~~~~~fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---~~~~~~---~---~~ 170 (267)
T 3kkz_A 103 GSMDDLPFRNEELDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAE---INDFWM---D---AY 170 (267)
T ss_dssp CCTTSCCCCTTCEEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH---HHHHHH---H---HC
T ss_pred cChhhCCCCCCCEEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH---HHHHHH---H---hC
Confidence 56666 5553 49999999999993 368999999999999999999987654432211 111110 0 01
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
...++.+++.++++++||+++++..++
T Consensus 171 ~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 171 PEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp TTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 234688999999999999999887764
No 62
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.84 E-value=9e-09 Score=67.87 Aligned_cols=88 Identities=14% Similarity=0.035 Sum_probs=59.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhccc-----CCCceeCCHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQ-----NPSGKKRTKH 85 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~g~~rt~~ 85 (115)
.|+|++..++| +++ ..++|+++++.|+|||++++.+............. .......... ......+|.+
T Consensus 117 fD~v~~~~~l~-~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (227)
T 3e8s_A 117 YDLICANFALL-HQD--IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQD---GWREESFAGFAGDWQPMPWYFRTLA 190 (227)
T ss_dssp EEEEEEESCCC-SSC--CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSC---EEEEECCTTSSSCCCCEEEEECCHH
T ss_pred ccEEEECchhh-hhh--HHHHHHHHHHHhCCCeEEEEEecCccccCcccccc---ccchhhhhccccCcccceEEEecHH
Confidence 49999999999 555 46999999999999999999887654432211000 0000000000 0122457999
Q ss_pred HHHHHHHhCCCCeeEEEEc
Q 048196 86 EFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 86 e~~~ll~~aGf~~~~~~~~ 104 (115)
+|.++|+++||+++++...
T Consensus 191 ~~~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 191 SWLNALDMAGLRLVSLQEP 209 (227)
T ss_dssp HHHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHcCCeEEEEecC
Confidence 9999999999999987653
No 63
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.82 E-value=1.2e-08 Score=66.10 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=62.7
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.+ +.+. .|+|++..++|++++++..++++++++.|+|||++++.+....+....+ ....
T Consensus 87 ~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~----------------~~~~ 150 (199)
T 2xvm_A 87 VDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT----------------VGFP 150 (199)
T ss_dssp CCGGGCCCCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC----------------SCCS
T ss_pred cchhhCCCCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC----------------CCCC
Confidence 45555 3333 4999999999999988889999999999999999999887765432110 0122
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEE
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEW 103 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~ 103 (115)
..++.+++.++|++ |++++...
T Consensus 151 ~~~~~~~l~~~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 151 FAFKEGELRRYYEG--WERVKYNE 172 (199)
T ss_dssp CCBCTTHHHHHTTT--SEEEEEEC
T ss_pred CccCHHHHHHHhcC--CeEEEecc
Confidence 34678899999986 98877643
No 64
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.80 E-value=3.2e-08 Score=63.66 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=61.2
Q ss_pred CCCCC-CCCc--ccEEEec-cccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCC
Q 048196 2 DDMFQ-NVPK--GDAIFMK-WILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNP 77 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (115)
+|+.+ +++. .|+|++. .++|++++++..++|+++++.|+|||++++....
T Consensus 96 ~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~-------------------------- 149 (195)
T 3cgg_A 96 GDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA-------------------------- 149 (195)
T ss_dssp CCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET--------------------------
T ss_pred cccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC--------------------------
Confidence 56666 5553 4999998 8999999888999999999999999999985321
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...++.++|.++++++||+++++...
T Consensus 150 -~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 150 -GRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp -TSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred -CCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 11157889999999999999877544
No 65
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.80 E-value=3.2e-09 Score=72.99 Aligned_cols=102 Identities=10% Similarity=-0.010 Sum_probs=65.3
Q ss_pred CCCCC-C-CCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch----hhhhchhccchhc
Q 048196 2 DDMFQ-N-VPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETST----VSKRNSQLDVLMM 73 (115)
Q Consensus 2 gd~~~-~-~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~----~~~~~~~~~l~~~ 73 (115)
||+.+ + .+. .|+|++..++|++++. .++|+++++.|+|||++++.+........... .............
T Consensus 124 ~d~~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (285)
T 4htf_A 124 CAAQDVASHLETPVDLILFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKK 201 (285)
T ss_dssp SCGGGTGGGCSSCEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC--
T ss_pred cCHHHhhhhcCCCceEEEECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcccccc
Confidence 45555 2 333 4999999999999876 68999999999999999998865432100000 0000000000000
Q ss_pred ccCCCceeCCHHHHHHHHHhCCCCeeEEEEcC
Q 048196 74 TQNPSGKKRTKHEFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 74 ~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 105 (115)
........++.++|.++|+++||+++++..+.
T Consensus 202 ~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 202 RTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp --CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred ccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence 00012355789999999999999999887764
No 66
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.79 E-value=1.1e-08 Score=70.66 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=56.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++++++|+++|. .+.|+++++.|+|||++++.+...+ .. .......+. ..+........++.++|.++
T Consensus 136 fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~----~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 207 (292)
T 2aot_A 136 WDFIHMIQMLYYVKDI--PATLKFFHSLLGTNAKMLIIVVSGS----SG-WDKLWKKYG-SRFPQDDLCQYITSDDLTQM 207 (292)
T ss_dssp EEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEECTT----SH-HHHHHHHHG-GGSCCCTTCCCCCHHHHHHH
T ss_pred eeEEEEeeeeeecCCH--HHHHHHHHHHcCCCcEEEEEEecCC----cc-HHHHHHHHH-HhccCCCcccCCCHHHHHHH
Confidence 4999999999999985 6899999999999999999864321 11 111100000 00000012345789999999
Q ss_pred HHhCCCCeeEE
Q 048196 91 ATGAGFSGTRF 101 (115)
Q Consensus 91 l~~aGf~~~~~ 101 (115)
|+++||+.+..
T Consensus 208 l~~aGf~~~~~ 218 (292)
T 2aot_A 208 LDNLGLKYECY 218 (292)
T ss_dssp HHHHTCCEEEE
T ss_pred HHHCCCceEEE
Confidence 99999998763
No 67
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.79 E-value=9.8e-09 Score=67.68 Aligned_cols=84 Identities=8% Similarity=0.048 Sum_probs=60.7
Q ss_pred CCCCC-CCC--c-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCC
Q 048196 2 DDMFQ-NVP--K-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNP 77 (115)
Q Consensus 2 gd~~~-~~p--~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (115)
||+++ +.+ . .|+|+.+.++|++++++..++++++++.|+|||+++++....+.... ..
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~------------------~~ 150 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALL------------------EG 150 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS------------------SS
T ss_pred CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcccc------------------CC
Confidence 57776 433 2 49999999999999988889999999999999996555433321100 00
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.....+.+|+.+++++ ||++..+...
T Consensus 151 ~~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 151 PPFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp CCCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred CCCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 1112578999999998 9998776654
No 68
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.77 E-value=9.9e-09 Score=67.78 Aligned_cols=88 Identities=13% Similarity=0.157 Sum_probs=60.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhh-hchhccc---hhcccCCCceeCCHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSK-RNSQLDV---LMMTQNPSGKKRTKHE 86 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~-~~~~~~l---~~~~~~~~g~~rt~~e 86 (115)
.|+|++..++|++++. .++|+++++.|+|||.+++......... .... ....+.. .... ....+.+|.++
T Consensus 94 fD~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 167 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHIS---VLAPLLAGNWTYTEYGLLD-KTHIRFFTFNE 167 (230)
T ss_dssp EEEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSHH---HHHHHHTTCCCCBSSSTTB-TTCCCCCCHHH
T ss_pred cCEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchHH---HHHHHhcCCceeccCCCCC-cceEEEecHHH
Confidence 3999999999999886 5999999999999999999765432210 0000 0000000 0000 11235579999
Q ss_pred HHHHHHhCCCCeeEEEEc
Q 048196 87 FLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 87 ~~~ll~~aGf~~~~~~~~ 104 (115)
|.++|+++||+++++...
T Consensus 168 ~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 168 MLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHcCCeEEEEEec
Confidence 999999999999887765
No 69
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.76 E-value=3.4e-08 Score=67.78 Aligned_cols=103 Identities=10% Similarity=-0.007 Sum_probs=66.3
Q ss_pred CCCCC-CC-Cc--ccEEEecccccc--CChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC-------CCc-hh------
Q 048196 2 DDMFQ-NV-PK--GDAIFMKWILHN--WSDDHCLKLLKIYYKSIPEDGKVIVVESILPELP-------ETS-TV------ 61 (115)
Q Consensus 2 gd~~~-~~-p~--~D~v~~~~vlh~--~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~-------~~~-~~------ 61 (115)
+|+.+ +. +. .|+|++..++|+ .+.++..++|+++++.|+|||++++..+...... -.. ..
T Consensus 121 ~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (298)
T 1ri5_A 121 QDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEK 200 (298)
T ss_dssp SCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCC
T ss_pred CCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCc
Confidence 56666 55 33 499999999998 6777889999999999999999999875432100 000 00
Q ss_pred ----hh-hchhccchh--cccCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 62 ----SK-RNSQLDVLM--MTQNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 62 ----~~-~~~~~~l~~--~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.. ....+.+.. .......+.++.++|.++++++||+++++...
T Consensus 201 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 201 MEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp CSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred cccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00 000011000 00001134568999999999999999888765
No 70
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.75 E-value=4e-08 Score=66.38 Aligned_cols=81 Identities=12% Similarity=0.082 Sum_probs=58.1
Q ss_pred ccEEEeccccccCCh--HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHH
Q 048196 11 GDAIFMKWILHNWSD--DHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFL 88 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d--~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~ 88 (115)
.|+|++..++|+.++ ++..++|+++++.|+|||++++.+..... . +...-.. ......+.++|.
T Consensus 158 fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-----~-------~~~~~~~--~~~~~~~~~~~~ 223 (265)
T 2i62_A 158 ADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-----Y-------YMIGEQK--FSSLPLGWETVR 223 (265)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-----E-------EEETTEE--EECCCCCHHHHH
T ss_pred ccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-----e-------EEcCCcc--ccccccCHHHHH
Confidence 499999999995543 36789999999999999999998843221 0 0000000 012235789999
Q ss_pred HHHHhCCCCeeEEEEcC
Q 048196 89 TLATGAGFSGTRFEWFT 105 (115)
Q Consensus 89 ~ll~~aGf~~~~~~~~~ 105 (115)
++|+++||+++++....
T Consensus 224 ~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 224 DAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp HHHHHTTCEEEEEEEEC
T ss_pred HHHHHCCCEEEEEEEec
Confidence 99999999999887653
No 71
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.74 E-value=8.9e-09 Score=70.95 Aligned_cols=98 Identities=11% Similarity=0.094 Sum_probs=63.6
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec-----C---CCCCCchh---hhhchhc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL-----P---ELPETSTV---SKRNSQL 68 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~-----~---~~~~~~~~---~~~~~~~ 68 (115)
+|+.+ +.+. .|+|++..++|+++|. .++|+++++.|+|||.+++.++.. . ++...+.. ......+
T Consensus 79 ~d~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (284)
T 3gu3_A 79 GDATEIELNDKYDIAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLF 156 (284)
T ss_dssp SCTTTCCCSSCEEEEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHH
T ss_pred cchhhcCcCCCeeEEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHH
Confidence 56666 4444 4999999999999986 699999999999999999998651 1 11111100 0011111
Q ss_pred cchhcccCCCceeCCHHHHHHHHHhCCCCeeEEEE
Q 048196 69 DVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEW 103 (115)
Q Consensus 69 ~l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 103 (115)
.-... . .+....+..++.++|++|||+.+++..
T Consensus 157 ~~~~~-~-~~~~~~~~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 157 ESDTQ-R-NGKDGNIGMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHH-H-TCCCTTGGGTHHHHHHHTTCEEEEEEE
T ss_pred HHHhh-h-hcccccHHHHHHHHHHHcCCCeEEEEE
Confidence 10011 1 133345667999999999999887643
No 72
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.74 E-value=3.5e-08 Score=67.12 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=63.5
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++.+++|+++|. .++|+++++.|+ ||++++.+...+..... .. ...+.. +.. ...
T Consensus 83 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~-~~---~~~~~~-~~~-~~~ 153 (261)
T 3ege_A 83 GYAENLALPDKSVDGVISILAIHHFSHL--EKSFQEMQRIIR-DGTIVLLTFDIRLAQRI-WL---YDYFPF-LWE-DAL 153 (261)
T ss_dssp CCTTSCCSCTTCBSEEEEESCGGGCSSH--HHHHHHHHHHBC-SSCEEEEEECGGGCCCC-GG---GGTCHH-HHH-HHH
T ss_pred CchhhCCCCCCCEeEEEEcchHhhccCH--HHHHHHHHHHhC-CcEEEEEEcCCchhHHH-HH---HHHHHH-Hhh-hhh
Confidence 57766 5553 4999999999999774 799999999999 99999999754432211 00 000000 010 012
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...++.+++. +|++|||+.+++...
T Consensus 154 ~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 154 RFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp TSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred hhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 3345677889 999999999888765
No 73
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=1.4e-08 Score=69.58 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=63.2
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhc---cchhcccC
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQL---DVLMMTQN 76 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~---~l~~~~~~ 76 (115)
+|+.+ +.+. .|+|++..++|+++|. .++|+++++.|+|||++++........ ..........+ ........
T Consensus 107 ~d~~~~~~~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 182 (279)
T 3ccf_A 107 ADARNFRVDKPLDAVFSNAMLHWVKEP--EAAIASIHQALKSGGRFVAEFGGKGNI--KYILEALYNALETLGIHNPQAL 182 (279)
T ss_dssp CCTTTCCCSSCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECTTTT--HHHHHHHHHHHHHHTCCCGGGG
T ss_pred CChhhCCcCCCcCEEEEcchhhhCcCH--HHHHHHHHHhcCCCcEEEEEecCCcch--HHHHHHHHHHHHhcCCccccCc
Confidence 56655 4443 4999999999999875 689999999999999999876543221 11000000000 00000000
Q ss_pred CCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 77 PSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 77 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.....++.++|.++|+++||+.+++...
T Consensus 183 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 183 NPWYFPSIGEYVNILEKQGFDVTYAALF 210 (279)
T ss_dssp CCCCCCCHHHHHHHHHHHTEEEEEEEEE
T ss_pred CceeCCCHHHHHHHHHHcCCEEEEEEEe
Confidence 1123568999999999999999876544
No 74
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.70 E-value=1.7e-08 Score=68.14 Aligned_cols=96 Identities=11% Similarity=0.029 Sum_probs=60.7
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc---hhhhhchhccchhccc
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETS---TVSKRNSQLDVLMMTQ 75 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~---~~~~~~~~~~l~~~~~ 75 (115)
+|+.+ +++. .|+|++..++|+++|. .++|+++++.|+|||++++. ...++ ..+ ............-...
T Consensus 93 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 2yqz_A 93 ADARAIPLPDESVHGVIVVHLWHLVPDW--PKVLAEAIRVLKPGGALLEG-WDQAE--ASPEWTLQERWRAFAAEEGFPV 167 (263)
T ss_dssp SCTTSCCSCTTCEEEEEEESCGGGCTTH--HHHHHHHHHHEEEEEEEEEE-EEEEC--CCHHHHHHHHHHHHHHHHTCCC
T ss_pred cccccCCCCCCCeeEEEECCchhhcCCH--HHHHHHHHHHCCCCcEEEEE-ecCCC--ccHHHHHHHHHHHHHHHhCCCc
Confidence 56655 5554 4999999999999874 68999999999999999987 22221 111 0000001010000000
Q ss_pred CCCceeCCHHHHHHHHHhCCCCeeEEE
Q 048196 76 NPSGKKRTKHEFLTLATGAGFSGTRFE 102 (115)
Q Consensus 76 ~~~g~~rt~~e~~~ll~~aGf~~~~~~ 102 (115)
......++.++|.++|+++||+.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 168 ERGLHAKRLKEVEEALRRLGLKPRTRE 194 (263)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred ccccccCCHHHHHHHHHHcCCCcceEE
Confidence 002235678899999999999987653
No 75
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.68 E-value=8.1e-08 Score=65.40 Aligned_cols=91 Identities=11% Similarity=0.074 Sum_probs=60.1
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhh-chhccchh--cc--cCCC-ceeCCH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKR-NSQLDVLM--MT--QNPS-GKKRTK 84 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~-~~~~~l~~--~~--~~~~-g~~rt~ 84 (115)
.|+|++..++|++++.+ .+++.++..++|||++++.+...+...... .... ........ .. ...+ ...+|.
T Consensus 123 fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 199 (275)
T 3bkx_A 123 FDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIAPSDVANIRTLITP 199 (275)
T ss_dssp CSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHSCCTTCSCCCCCCH
T ss_pred EEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhccccccccccccCCH
Confidence 49999999999999875 477777777888999999998776543211 0000 00000000 00 0011 245799
Q ss_pred HHHHHHHHhCCCCeeEEEEc
Q 048196 85 HEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 85 ~e~~~ll~~aGf~~~~~~~~ 104 (115)
++|.++++++||+++++..+
T Consensus 200 ~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 200 DTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHCCCeeEEEEEe
Confidence 99999999999999877654
No 76
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.66 E-value=1.2e-07 Score=62.56 Aligned_cols=81 Identities=7% Similarity=0.033 Sum_probs=53.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHH--
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFL-- 88 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~-- 88 (115)
.|+|++..++|++++++..++|+++++.|+|||.+++........ .+....... ..........|.+++.
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 174 (217)
T 3jwh_A 103 YDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNV-------KFANLPAGK-LRHKDHRFEWTRSQFQNW 174 (217)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHH-------HTC------------CCSCBCHHHHHHH
T ss_pred cCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccch-------hhccccccc-ccccccccccCHHHHHHH
Confidence 499999999999999988999999999999999777655421100 000000000 0001133446889998
Q ss_pred --HHHHhCCCCee
Q 048196 89 --TLATGAGFSGT 99 (115)
Q Consensus 89 --~ll~~aGf~~~ 99 (115)
++++++||++.
T Consensus 175 ~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 175 ANKITERFAYNVQ 187 (217)
T ss_dssp HHHHHHHSSEEEE
T ss_pred HHHHHHHcCceEE
Confidence 88889999774
No 77
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.66 E-value=1.2e-07 Score=62.53 Aligned_cols=91 Identities=10% Similarity=0.089 Sum_probs=57.5
Q ss_pred CCCCC-CCC--cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVP--KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.. +.+ ..|+|++..++|++++++..++|+++++.|+|||.+++.........-. ........ ....
T Consensus 91 ~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~-------~~~~~~~~-~~~~ 162 (219)
T 3jwg_A 91 SSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYG-------NLFEGNLR-HRDH 162 (219)
T ss_dssp CCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCC-------CT-----G-GGCC
T ss_pred CcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhc-------ccCccccc-ccCc
Confidence 45544 333 2499999999999999988999999999999999665544321111000 00000000 0112
Q ss_pred ceeCCHHHHH----HHHHhCCCCeeE
Q 048196 79 GKKRTKHEFL----TLATGAGFSGTR 100 (115)
Q Consensus 79 g~~rt~~e~~----~ll~~aGf~~~~ 100 (115)
....|.+++. ++++++||++..
T Consensus 163 ~~~~~~~~l~~~~~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 163 RFEWTRKEFQTWAVKVAEKYGYSVRF 188 (219)
T ss_dssp TTSBCHHHHHHHHHHHHHHHTEEEEE
T ss_pred eeeecHHHHHHHHHHHHHHCCcEEEE
Confidence 3446888998 788899996643
No 78
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.65 E-value=3.8e-08 Score=67.82 Aligned_cols=80 Identities=11% Similarity=0.119 Sum_probs=57.8
Q ss_pred ccEEEeccccccCChH--HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHH
Q 048196 11 GDAIFMKWILHNWSDD--HCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFL 88 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~--~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~ 88 (115)
.|+|++..++|+.+++ +..++|+++++.|+|||++++.+...... +...-. ......++.++|.
T Consensus 175 fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~------------~~~~~~--~~~~~~~~~~~l~ 240 (289)
T 2g72_A 175 ADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW------------YLAGEA--RLTVVPVSEEEVR 240 (289)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE------------EEETTE--EEECCCCCHHHHH
T ss_pred CCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce------------EEcCCe--eeeeccCCHHHHH
Confidence 4999999999996543 67899999999999999999986432110 000000 0012246899999
Q ss_pred HHHHhCCCCeeEEEEc
Q 048196 89 TLATGAGFSGTRFEWF 104 (115)
Q Consensus 89 ~ll~~aGf~~~~~~~~ 104 (115)
++|+++||+++++...
T Consensus 241 ~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 241 EALVRSGYKVRDLRTY 256 (289)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHcCCeEEEeeEe
Confidence 9999999999877544
No 79
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.64 E-value=7.7e-08 Score=69.48 Aligned_cols=83 Identities=14% Similarity=0.170 Sum_probs=61.4
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++.+++||++| ..++|+++++.|+|||++++........ ... ..++- .. ..+...+|.++|.++
T Consensus 172 fD~I~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~-----~~~--~~~~~--~~-~~~~~~~s~~~l~~l 239 (416)
T 4e2x_A 172 ANVIYAANTLCHIPY--VQSVLEGVDALLAPDGVFVFEDPYLGDI-----VAK--TSFDQ--IF-DEHFFLFSATSVQGM 239 (416)
T ss_dssp EEEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEEEECHHHH-----HHH--TCGGG--CS-TTCCEECCHHHHHHH
T ss_pred EEEEEECChHHhcCC--HHHHHHHHHHHcCCCeEEEEEeCChHHh-----hhh--cchhh--hh-hhhhhcCCHHHHHHH
Confidence 499999999999986 4799999999999999999865443211 000 00111 10 124556899999999
Q ss_pred HHhCCCCeeEEEEcC
Q 048196 91 ATGAGFSGTRFEWFT 105 (115)
Q Consensus 91 l~~aGf~~~~~~~~~ 105 (115)
++++||+++++...+
T Consensus 240 l~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 240 AQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHcCCEEEEEEEcc
Confidence 999999999887764
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.63 E-value=1e-08 Score=68.93 Aligned_cols=88 Identities=11% Similarity=0.014 Sum_probs=59.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchh-----ccch-hcccCCCceeCCH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQ-----LDVL-MMTQNPSGKKRTK 84 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~-----~~l~-~~~~~~~g~~rt~ 84 (115)
.|+|++..++|++++++..++|++++++|+|||+++|.+...++... ....... ..+. ..........++.
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDF---FNSLLEKYGQLPYELLLVMEHGIRPGIFTA 201 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHH---HHHHHHHHSSCCHHHHHHHTTTCCCCCCCH
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHH---HHHHHhCCCCCchhhhhccccCCCCCccCH
Confidence 48999999999999888899999999999999999999986543210 0000000 0000 0000011123689
Q ss_pred HHHHHHHHhCCCCeeEEEE
Q 048196 85 HEFLTLATGAGFSGTRFEW 103 (115)
Q Consensus 85 ~e~~~ll~~aGf~~~~~~~ 103 (115)
+++.++| +||++++...
T Consensus 202 ~~~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 202 EDIELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHHHC--TTEEEEEEEC
T ss_pred HHHHHHh--CCCEEEeccc
Confidence 9999999 9999987544
No 81
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.60 E-value=7e-08 Score=65.02 Aligned_cols=94 Identities=10% Similarity=0.092 Sum_probs=58.3
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchh--ccchhc-cc
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQ--LDVLMM-TQ 75 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~--~~l~~~-~~ 75 (115)
+|+.+ + +. .|+|++..++|+++| ..++|+++++.|+|||++++.................... +.-... ..
T Consensus 85 ~d~~~~~-~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
T 2p35_A 85 ADLATWK-PAQKADLLYANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGG 161 (259)
T ss_dssp CCTTTCC-CSSCEEEEEEESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC----
T ss_pred CChhhcC-ccCCcCEEEEeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhcccc
Confidence 56665 4 43 499999999999987 4689999999999999999987532211000000000000 000000 00
Q ss_pred CCCceeCCHHHHHHHHHhCCCCe
Q 048196 76 NPSGKKRTKHEFLTLATGAGFSG 98 (115)
Q Consensus 76 ~~~g~~rt~~e~~~ll~~aGf~~ 98 (115)
......++.++|.++|+++||++
T Consensus 162 ~~~~~~~~~~~~~~~l~~aGf~v 184 (259)
T 2p35_A 162 LRRKPLPPPSDYFNALSPKSSRV 184 (259)
T ss_dssp ---CCCCCHHHHHHHHGGGEEEE
T ss_pred ccccCCCCHHHHHHHHHhcCCce
Confidence 01234578999999999999974
No 82
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.56 E-value=3e-08 Score=68.18 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=36.9
Q ss_pred ccEEEec-cccccCCh-----HHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMK-WILHNWSD-----DHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~-~vlh~~~d-----~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++. +++|++++ ++..++|+++++.|+|||++++...
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 4999998 89999998 7889999999999999999998765
No 83
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.55 E-value=2.5e-07 Score=63.15 Aligned_cols=84 Identities=12% Similarity=-0.032 Sum_probs=61.9
Q ss_pred CCCCC-CCC--c-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCC
Q 048196 2 DDMFQ-NVP--K-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNP 77 (115)
Q Consensus 2 gd~~~-~~p--~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (115)
||+++ +.+ . .|+|+.+.++|++++++..++++++++.|+|||+++++....+..... .
T Consensus 140 ~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~------------------g 201 (252)
T 2gb4_A 140 CSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA------------------G 201 (252)
T ss_dssp SCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCC------------------C
T ss_pred CccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCC------------------C
Confidence 68887 443 2 499999999999998888899999999999999998766553321100 0
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.....+.+|+.++|+. +|+++.....
T Consensus 202 ~~~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 202 PPFYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp SSCCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred CCCCCCHHHHHHHhhC-CeEEEEEecc
Confidence 0112578999999987 5988776543
No 84
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.54 E-value=8.1e-07 Score=57.77 Aligned_cols=86 Identities=8% Similarity=0.004 Sum_probs=60.4
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
+|+.+ +++. .|+|++. +++++.++..++|+++++.|+|||++++.+........ . ... - ...
T Consensus 83 ~d~~~~~~~~~~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-------~--~~~--~--~~~ 147 (202)
T 2kw5_A 83 SNLADFDIVADAWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY-------N--TGG--P--KDL 147 (202)
T ss_dssp CBTTTBSCCTTTCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG-------T--SCC--S--SSG
T ss_pred cChhhcCCCcCCccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC-------C--CCC--C--Ccc
Confidence 56666 5553 4999984 34567778899999999999999999998875443210 0 000 0 012
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
...+|.+++.++|+ ||+++++...
T Consensus 148 ~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 148 DLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp GGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred eeecCHHHHHHHhc--CceEEEEEEE
Confidence 34579999999998 9999876543
No 85
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.50 E-value=2e-07 Score=64.60 Aligned_cols=80 Identities=14% Similarity=0.142 Sum_probs=56.9
Q ss_pred EEEeccccccCChHH-HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHHH
Q 048196 13 AIFMKWILHNWSDDH-CLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLA 91 (115)
Q Consensus 13 ~v~~~~vlh~~~d~~-~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll 91 (115)
++++..+||+++|++ ...++++++++|+|||.|++.+...+..+.. .... ....-..- .....||.+|+.++|
T Consensus 163 av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~--~~~~---~~~~~~~g-~p~~~rs~~ei~~~f 236 (277)
T 3giw_A 163 ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQE--VGRV---AREYAARN-MPMRLRTHAEAEEFF 236 (277)
T ss_dssp EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHH--HHHH---HHHHHHTT-CCCCCCCHHHHHHTT
T ss_pred hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHH--HHHH---HHHHHhcC-CCCccCCHHHHHHHh
Confidence 688899999999976 5899999999999999999999776532211 1111 11111111 134568999999999
Q ss_pred HhCCCCeeE
Q 048196 92 TGAGFSGTR 100 (115)
Q Consensus 92 ~~aGf~~~~ 100 (115)
. ||+.++
T Consensus 237 ~--Glelve 243 (277)
T 3giw_A 237 E--GLELVE 243 (277)
T ss_dssp T--TSEECT
T ss_pred C--CCcccC
Confidence 4 998654
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.46 E-value=6.6e-07 Score=61.36 Aligned_cols=82 Identities=11% Similarity=0.097 Sum_probs=60.2
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.+ +.+. .|+|++..++|+++++...++++++++.|+|||.+++......+....+ ....
T Consensus 174 ~d~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------------~~~~ 237 (286)
T 3m70_A 174 YDINAANIQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP----------------LPFS 237 (286)
T ss_dssp CCGGGCCCCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS----------------SCCS
T ss_pred eccccccccCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC----------------CCcc
Confidence 56665 3333 4999999999999999899999999999999999888776655432111 0122
Q ss_pred eeCCHHHHHHHHHhCCCCeeEE
Q 048196 80 KKRTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~ 101 (115)
...+.+++.++++. |+++..
T Consensus 238 ~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 238 FTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp CCBCTTHHHHHTTT--SEEEEE
T ss_pred ccCCHHHHHHHhcC--CEEEEE
Confidence 33567899999954 877665
No 87
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.44 E-value=4.6e-07 Score=59.35 Aligned_cols=84 Identities=11% Similarity=-0.018 Sum_probs=56.2
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhc-cchhcccCC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQL-DVLMMTQNP 77 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~-~l~~~~~~~ 77 (115)
+|+.+ +.+. .|+|++..++|++++. .++|+++++.|+|||++++.+...... ........ ...... ..
T Consensus 84 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~-~~ 155 (211)
T 2gs9_A 84 AWGEALPFPGESFDVVLLFTTLEFVEDV--ERVLLEARRVLRPGGALVVGVLEALSP-----WAALYRRLGEKGVLP-WA 155 (211)
T ss_dssp CCTTSCCSCSSCEEEEEEESCTTTCSCH--HHHHHHHHHHEEEEEEEEEEEECTTSH-----HHHHHHHHHHTTCTT-GG
T ss_pred cccccCCCCCCcEEEEEEcChhhhcCCH--HHHHHHHHHHcCCCCEEEEEecCCcCc-----HHHHHHHHhhccCcc-cc
Confidence 56666 5554 4999999999999864 699999999999999999987643321 11000000 000000 11
Q ss_pred CceeCCHHHHHHHHHhCC
Q 048196 78 SGKKRTKHEFLTLATGAG 95 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aG 95 (115)
..+.+|.+++.++|+ |
T Consensus 156 ~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 156 QARFLAREDLKALLG--P 171 (211)
T ss_dssp GCCCCCHHHHHHHHC--S
T ss_pred ccccCCHHHHHHHhc--C
Confidence 345689999999998 7
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.34 E-value=4.2e-06 Score=56.14 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=37.8
Q ss_pred CCCCC-CCCc-ccEEEec-cccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 2 DDMFQ-NVPK-GDAIFMK-WILHNWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
+|+.+ +.+. .|+|++. ..+|++++++..++|+++++.|+|||.+++.
T Consensus 95 ~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 95 GDVLEIAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCGGGCCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhhcccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 56666 4444 4999986 5677888888999999999999999998764
No 89
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.33 E-value=5.9e-08 Score=67.24 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=55.0
Q ss_pred ccEEEeccccccC----ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHH
Q 048196 11 GDAIFMKWILHNW----SDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHE 86 (115)
Q Consensus 11 ~D~v~~~~vlh~~----~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e 86 (115)
.|+|++..++|++ +++...++++++++.|+|||++++.......- .+... ..-..... ........++
T Consensus 178 fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y------~~~~~-~~~~~~~~-~~~~~~~p~~ 249 (292)
T 3g07_A 178 YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY------GKRKT-LTETIYKN-YYRIQLKPEQ 249 (292)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHH------HTTTT-SCHHHHHH-HHHCCCCGGG
T ss_pred cCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhh------hhhhc-ccHHHHhh-hhcEEEcHHH
Confidence 4999999999655 78889999999999999999998843221100 00000 00000000 1122334789
Q ss_pred HHHHHHh--CCCCeeEEEEc
Q 048196 87 FLTLATG--AGFSGTRFEWF 104 (115)
Q Consensus 87 ~~~ll~~--aGf~~~~~~~~ 104 (115)
+.++|.+ +||+.+++...
T Consensus 250 ~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 250 FSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHhcCCCceEEEEecc
Confidence 9999999 99998877544
No 90
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.29 E-value=9.2e-07 Score=57.78 Aligned_cols=80 Identities=15% Similarity=0.012 Sum_probs=61.4
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCce
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGK 80 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 80 (115)
+|+.+..+. .|+|++...+|+ ..++++++++.|+|||++++.+....
T Consensus 116 ~d~~~~~~~~fD~i~~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------- 163 (205)
T 3grz_A 116 TSLLADVDGKFDLIVANILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDYL--------------------------- 163 (205)
T ss_dssp SSTTTTCCSCEEEEEEESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEGG---------------------------
T ss_pred ccccccCCCCceEEEECCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCcc---------------------------
Confidence 566664444 599999887765 46889999999999999999543321
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
+.+++.++++++||+.+++.......+++.-+|
T Consensus 164 --~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 164 --QLPKIEQALAENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp --GHHHHHHHHHHTTEEEEEEEEETTEEEEEEEEC
T ss_pred --cHHHHHHHHHHcCCceEEeeccCCEEEEEEecc
Confidence 357899999999999999887777777776554
No 91
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.25 E-value=9.2e-07 Score=61.16 Aligned_cols=46 Identities=15% Similarity=0.281 Sum_probs=41.1
Q ss_pred CCCCC-CCC--c-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEE
Q 048196 2 DDMFQ-NVP--K-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 2 gd~~~-~~p--~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii 47 (115)
+|+++ ++| . .|+|++++++++++++...+++++++++|+|||.+++
T Consensus 201 ~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 201 VNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 57777 455 2 4999999999999999999999999999999999988
No 92
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.17 E-value=3.6e-06 Score=58.76 Aligned_cols=94 Identities=16% Similarity=0.110 Sum_probs=57.2
Q ss_pred ccEEEeccccccC-ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCC------------Cchhhhhchhc--cc-hhcc
Q 048196 11 GDAIFMKWILHNW-SDDHCLKLLKIYYKSIPEDGKVIVVESILPELPE------------TSTVSKRNSQL--DV-LMMT 74 (115)
Q Consensus 11 ~D~v~~~~vlh~~-~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~------------~~~~~~~~~~~--~l-~~~~ 74 (115)
.|+|++..++|+. ++++..++|++++++|+|||.+++.....+.-.. ....+...... +. ..+.
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVV 209 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEE
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccccce
Confidence 3999999999974 5455689999999999999999887653211000 00000000000 00 0000
Q ss_pred cCCCc-------eeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 75 QNPSG-------KKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 75 ~~~~g-------~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
..+.+ ...+.+++.++++++||+++.....
T Consensus 210 ~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 210 YNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp BCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred eeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 00111 2467899999999999999887654
No 93
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.05 E-value=9.8e-06 Score=56.29 Aligned_cols=94 Identities=12% Similarity=-0.052 Sum_probs=58.6
Q ss_pred ccEEEeccccccC--ChHHHHHHHHHHHhhCCCCCEEEEEeeecCC-------CCCCchhhh-----h---------chh
Q 048196 11 GDAIFMKWILHNW--SDDHCLKLLKIYYKSIPEDGKVIVVESILPE-------LPETSTVSK-----R---------NSQ 67 (115)
Q Consensus 11 ~D~v~~~~vlh~~--~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~-------~~~~~~~~~-----~---------~~~ 67 (115)
.|+|++..++|+. +.++..++|+++++.|+|||.+++..+..+. ......... + ...
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 194 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCK 194 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCE
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccce
Confidence 4999999999987 4466789999999999999999997663211 000000000 0 000
Q ss_pred ccchh-cccCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 68 LDVLM-MTQNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 68 ~~l~~-~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
..+.+ ..........+.+++.++++++||+.+.....
T Consensus 195 ~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 195 YDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp EEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred EEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 00000 00000122357899999999999999887654
No 94
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.05 E-value=3.2e-06 Score=58.36 Aligned_cols=82 Identities=13% Similarity=0.134 Sum_probs=50.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhh-chhc-cchhcccCCCceeCCHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKR-NSQL-DVLMMTQNPSGKKRTKHEFL 88 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~-~~~~-~l~~~~~~~~g~~rt~~e~~ 88 (115)
.|+|++..++|++ + ..++++++++.|+|||.+++.+...+.....+..... .... +-..+. +.-.....+.+.
T Consensus 114 fD~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~p~~~~~~ 188 (299)
T 3g5t_A 114 IDMITAVECAHWF-D--FEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLG--PYWEQPGRSRLR 188 (299)
T ss_dssp EEEEEEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTG--GGSCTTHHHHHH
T ss_pred eeEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCccccc--chhhchhhHHHH
Confidence 4999999999999 4 5799999999999999999966543221111111100 0000 000010 001113456789
Q ss_pred HHHHhCCCC
Q 048196 89 TLATGAGFS 97 (115)
Q Consensus 89 ~ll~~aGf~ 97 (115)
++++++||.
T Consensus 189 ~~l~~~gfp 197 (299)
T 3g5t_A 189 NMLKDSHLD 197 (299)
T ss_dssp TTTTTCCCC
T ss_pred HhhhccCCC
Confidence 999999994
No 95
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.03 E-value=5e-05 Score=48.37 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=59.4
Q ss_pred CCCCCCCCc--ccEEEeccccccCChH-------HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchh
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDD-------HCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLM 72 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~-------~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~ 72 (115)
||++++++. .|+|++...+|..++. +...+++++.+.| |||++++.+...
T Consensus 68 ~d~~~~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-------------------- 126 (170)
T 3q87_B 68 ADLLCSINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-------------------- 126 (170)
T ss_dssp CSTTTTBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------------------
T ss_pred CChhhhcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------------------
Confidence 677776663 4999999999866554 4577889999999 999999866211
Q ss_pred cccCCCceeCCHHHHHHHHHhCCCCeeEEEEcC-CceEEEE
Q 048196 73 MTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFT-CNLWVRD 112 (115)
Q Consensus 73 ~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~lie 112 (115)
.+.+++.++++++||+..++.... +...++.
T Consensus 127 ---------~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~ 158 (170)
T 3q87_B 127 ---------NRPKEVLARLEERGYGTRILKVRKILGETVYI 158 (170)
T ss_dssp ---------GCHHHHHHHHHHTTCEEEEEEEEECSSSEEEE
T ss_pred ---------CCHHHHHHHHHHCCCcEEEEEeeccCCceEEE
Confidence 134789999999999988776553 4444443
No 96
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.03 E-value=1.7e-05 Score=52.77 Aligned_cols=80 Identities=13% Similarity=-0.052 Sum_probs=52.8
Q ss_pred ccEEEeccccccCChH-HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHH
Q 048196 11 GDAIFMKWILHNWSDD-HCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLT 89 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ 89 (115)
.|+|+ |++++. +...+++++.+.|+|||++++. .........+. ......+++.
T Consensus 144 ~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~------------------~~~~~~~~l~- 198 (230)
T 1fbn_A 144 VDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKD------------------PKEIFKEQKE- 198 (230)
T ss_dssp EEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSC------------------HHHHHHHHHH-
T ss_pred EEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCC------------------HHHhhHHHHH-
Confidence 49887 666653 4567799999999999999997 32211111100 0001236788
Q ss_pred HHHhCCCCeeEEEEcCCc---eEEEEEEC
Q 048196 90 LATGAGFSGTRFEWFTCN---LWVRDFYK 115 (115)
Q Consensus 90 ll~~aGf~~~~~~~~~~~---~~lie~~~ 115 (115)
+|+++||+.+++..+.+. +.++.++|
T Consensus 199 ~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 199 ILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp HHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred HHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 999999999988887654 66666653
No 97
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.02 E-value=6e-06 Score=54.13 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=40.5
Q ss_pred CCCCCCCCc--ccEEEeccccccCCh-HHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSD-DHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
+|+.+..+. .|+|++..++|++++ ++..++|+++++.|+|||.+++...
T Consensus 104 ~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 104 TDILQFSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp CCTTTCCCSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cchhhCCCCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 566662243 499999999999997 5567999999999999999998665
No 98
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.90 E-value=1.4e-05 Score=54.58 Aligned_cols=49 Identities=10% Similarity=0.008 Sum_probs=39.8
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
||+.+ ++|. .|+|++..++|+++. .+.++++++.|+|||+++++....+
T Consensus 88 ~~~e~~~~~~~sfD~v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 88 APAEDTGLPPASVDVAIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCTTCCCCCSSCEEEEEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hhhhhhcccCCcccEEEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 55555 6665 399999999998865 4789999999999999999887544
No 99
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.88 E-value=0.0001 Score=50.37 Aligned_cols=84 Identities=10% Similarity=-0.039 Sum_probs=59.9
Q ss_pred CCCCCCCCc--ccEEEecc-------------ccccCCh----------HHHHHHHHHHHhhCCCCCEEEEEeeecCCCC
Q 048196 2 DDMFQNVPK--GDAIFMKW-------------ILHNWSD----------DHCLKLLKIYYKSIPEDGKVIVVESILPELP 56 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~-------------vlh~~~d----------~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~ 56 (115)
||++++++. .|+|++.. ++++.|. +...++++++.+.|+|||.+++..
T Consensus 166 ~d~~~~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~------- 238 (276)
T 2b3t_A 166 SDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH------- 238 (276)
T ss_dssp CSTTGGGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-------
T ss_pred cchhhhcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-------
Confidence 677775543 49999873 4444432 346889999999999999998841
Q ss_pred CCchhhhhchhccchhcccCCCceeCCHHHHHHHHHhCCCCeeEEEE-cCCceEEEEEEC
Q 048196 57 ETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEW-FTCNLWVRDFYK 115 (115)
Q Consensus 57 ~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~lie~~~ 115 (115)
. . .+.+++.++++++||+.+++.. ..+...++.+++
T Consensus 239 -~-----------------~-----~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 239 -G-----------------W-----QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp -C-----------------S-----SCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred -C-----------------c-----hHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 0 0 1357899999999999887765 456667776654
No 100
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.87 E-value=3.9e-05 Score=48.89 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.+..+. .|+|++...+|+ +.+...++++++.+.|+|||++++.......
T Consensus 109 ~d~~~~~~~~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~------------------------- 162 (194)
T 1dus_A 109 SDLYENVKDRKYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG------------------------- 162 (194)
T ss_dssp CSTTTTCTTSCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH-------------------------
T ss_pred CchhcccccCCceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCCC-------------------------
Confidence 566665443 499999888874 4566789999999999999999997542210
Q ss_pred eeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEEEC
Q 048196 80 KKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDFYK 115 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~~~ 115 (115)
..++.+++++. |..+++........++.++|
T Consensus 163 ----~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 163 ----AKSLAKYMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp ----HHHHHHHHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred ----hHHHHHHHHHH-hcceEEEecCCcEEEEEEee
Confidence 13566677766 66666666666777777765
No 101
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.66 E-value=0.0003 Score=50.61 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=62.8
Q ss_pred CCCCCC-CCCcc--cEEEeccccccCChH------------------------------------HHHHHHHHHHhhCCC
Q 048196 1 MDDMFQ-NVPKG--DAIFMKWILHNWSDD------------------------------------HCLKLLKIYYKSIPE 41 (115)
Q Consensus 1 ~gd~~~-~~p~~--D~v~~~~vlh~~~d~------------------------------------~~~~iL~~~~~aL~p 41 (115)
+|.|+. .+|.. |+++.+.+||-.++. +-..+|+..++.|+|
T Consensus 138 pgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~p 217 (374)
T 3b5i_A 138 PGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKR 217 (374)
T ss_dssp ESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 377888 67753 999999999977621 334578999999999
Q ss_pred CCEEEEEeeecCCCCCCchhhhhchhc-cc-----hhccc------------CCCceeCCHHHHHHHHH-hCCCCeeEEE
Q 048196 42 DGKVIVVESILPELPETSTVSKRNSQL-DV-----LMMTQ------------NPSGKKRTKHEFLTLAT-GAGFSGTRFE 102 (115)
Q Consensus 42 gg~lii~d~~~~~~~~~~~~~~~~~~~-~l-----~~~~~------------~~~g~~rt~~e~~~ll~-~aGf~~~~~~ 102 (115)
||++++.=...++........ ....+ ++ .-++. +.--..+|.+|++++++ ++||++.++.
T Consensus 218 GG~mvl~~~gr~~~~~~~~~~-~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le 296 (374)
T 3b5i_A 218 GGAMFLVCLGRTSVDPTDQGG-AGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLV 296 (374)
T ss_dssp EEEEEEEEEECCCSSTTCCHH-HHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred CCEEEEEEecCCCCccccccc-hhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEE
Confidence 999998665443321100000 00001 10 00110 00123479999999998 5999987764
Q ss_pred E
Q 048196 103 W 103 (115)
Q Consensus 103 ~ 103 (115)
.
T Consensus 297 ~ 297 (374)
T 3b5i_A 297 V 297 (374)
T ss_dssp E
T ss_pred E
Confidence 3
No 102
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.65 E-value=3.2e-05 Score=56.52 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=41.6
Q ss_pred CCCCC-CCC----cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC
Q 048196 2 DDMFQ-NVP----KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELP 56 (115)
Q Consensus 2 gd~~~-~~p----~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~ 56 (115)
||+++ +++ .+|+|++.++++ + ++..+.|+++++.|+|||+|++.|.+.+++.
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred CcccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 78888 553 469999887774 3 3457778899999999999999999888654
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.64 E-value=0.00037 Score=55.01 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=60.8
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC---CC-ch-hhhhchhccchhc
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELP---ET-ST-VSKRNSQLDVLMM 73 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~---~~-~~-~~~~~~~~~l~~~ 73 (115)
||+.+ +.+. .|+|++..++||+++++...+++++++.|+|| .++|..+..+-.. .. +. ............+
T Consensus 785 GDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~f 863 (950)
T 3htx_A 785 GSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKF 863 (950)
T ss_dssp SCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSC
T ss_pred CchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccc
Confidence 67766 4442 49999999999999998889999999999999 7777654332100 00 00 0000000000011
Q ss_pred ccCCCceeCCHHHHHH----HHHhCCCCeeEEEEcC
Q 048196 74 TQNPSGKKRTKHEFLT----LATGAGFSGTRFEWFT 105 (115)
Q Consensus 74 ~~~~~g~~rt~~e~~~----ll~~aGf~~~~~~~~~ 105 (115)
.......+.+.++++. +.+..||.+ ++..++
T Consensus 864 Rh~DHrFEWTReEFr~Wae~LAer~GYsV-efvGVG 898 (950)
T 3htx_A 864 RNHDHKFEWTREQFNQWASKLGKRHNYSV-EFSGVG 898 (950)
T ss_dssp SCSSCSCCBCHHHHHHHHHHHHHHTTEEE-EEEEES
T ss_pred cccCcceeecHHHHHHHHHHHHHhcCcEE-EEEccC
Confidence 1112345678888888 555678865 555654
No 104
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.61 E-value=3.4e-05 Score=50.14 Aligned_cols=51 Identities=18% Similarity=0.169 Sum_probs=40.9
Q ss_pred CCCCC-CCCc--ccEEEeccccccCC-------------hHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWS-------------DDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~-------------d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
+|+.+ +++. .|+|++..++|++. .++..++|+++++.|+|||++++.++..
T Consensus 96 ~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 96 MDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 56666 5553 49999999988765 4567899999999999999999987543
No 105
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.59 E-value=0.00034 Score=45.40 Aligned_cols=61 Identities=10% Similarity=0.145 Sum_probs=45.3
Q ss_pred CCCCCCCC---cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNVP---KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~p---~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.+.++ ..|++++...++ ...++++++.+.|+|||++++......
T Consensus 97 ~d~~~~~~~~~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------- 146 (204)
T 3e05_A 97 AFAPEGLDDLPDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTLD------------------------- 146 (204)
T ss_dssp CCTTTTCTTSCCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBHH-------------------------
T ss_pred CChhhhhhcCCCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEecccc-------------------------
Confidence 56655333 359999988876 346899999999999999998542211
Q ss_pred ceeCCHHHHHHHHHhCCC
Q 048196 79 GKKRTKHEFLTLATGAGF 96 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf 96 (115)
+.+++.++++++||
T Consensus 147 ----~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 147 ----TLTKAVEFLEDHGY 160 (204)
T ss_dssp ----HHHHHHHHHHHTTC
T ss_pred ----cHHHHHHHHHHCCC
Confidence 24678888999998
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.51 E-value=7.9e-05 Score=48.87 Aligned_cols=90 Identities=9% Similarity=0.034 Sum_probs=50.1
Q ss_pred CCCCC-CCCcc-cEEEecc---cc--ccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcc
Q 048196 2 DDMFQ-NVPKG-DAIFMKW---IL--HNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMT 74 (115)
Q Consensus 2 gd~~~-~~p~~-D~v~~~~---vl--h~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~ 74 (115)
||+.+ +.+.. |.+.+.. .+ |+.+|. .++|+++++.|+|||++++.-....-....+ .+.-.
T Consensus 88 ~d~~~l~~~~~~d~v~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---------~~~~~- 155 (218)
T 3mq2_A 88 ATAERLPPLSGVGELHVLMPWGSLLRGVLGSS--PEMLRGMAAVCRPGASFLVALNLHAWRPSVP---------EVGEH- 155 (218)
T ss_dssp CCSTTCCSCCCEEEEEEESCCHHHHHHHHTSS--SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG---------GGTTC-
T ss_pred cchhhCCCCCCCCEEEEEccchhhhhhhhccH--HHHHHHHHHHcCCCcEEEEEecccccccccc---------ccccC-
Confidence 56666 44422 6665222 11 233333 6899999999999999998432211111100 00000
Q ss_pred cCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 75 QNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 75 ~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
......+..+++.++++++||++.++..+
T Consensus 156 -~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 156 -PEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp -CCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred -CccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 00112223456889999999999887654
No 107
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.51 E-value=0.00055 Score=45.12 Aligned_cols=80 Identities=11% Similarity=-0.060 Sum_probs=50.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++... ..+....+++++++.|+|||++++. .........+ .....+.+++.++
T Consensus 144 ~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~------------------~~~~~~~~~l~~l 200 (227)
T 1g8a_A 144 VDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTK------------------EPEQVFREVEREL 200 (227)
T ss_dssp EEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTS------------------CHHHHHHHHHHHH
T ss_pred ceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCC------------------ChhhhhHHHHHHH
Confidence 499986433 2333456699999999999999998 3222111110 0011235678887
Q ss_pred HHhCCCCeeEEEEcCCc---eEEEEEEC
Q 048196 91 ATGAGFSGTRFEWFTCN---LWVRDFYK 115 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~~---~~lie~~~ 115 (115)
+++ |+.++...+.+. +.++.++|
T Consensus 201 -~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 201 -SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp -HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred -Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 777 999988887544 66666654
No 108
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.50 E-value=0.00015 Score=49.00 Aligned_cols=79 Identities=5% Similarity=-0.048 Sum_probs=48.4
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|++++. +++.. +...+++++++.|||||+++|.......+...+ .. ...++-.+.
T Consensus 148 vDvVf~d--~~~~~--~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p-------------------~~-~~~~~ev~~ 203 (233)
T 4df3_A 148 VDGLYAD--VAQPE--QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTE-------------------PS-EVYKREIKT 203 (233)
T ss_dssp EEEEEEC--CCCTT--HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTC-------------------CC-HHHHHHHHH
T ss_pred EEEEEEe--ccCCh--hHHHHHHHHHHhccCCCEEEEEEecccCCCCCC-------------------hH-HHHHHHHHH
Confidence 4887753 22222 357899999999999999998653221111000 00 011334567
Q ss_pred HHhCCCCeeEEEEcCC---ceEEEEE
Q 048196 91 ATGAGFSGTRFEWFTC---NLWVRDF 113 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~---~~~lie~ 113 (115)
|+++||+..+...+.+ .+.++-+
T Consensus 204 L~~~GF~l~e~i~L~pf~~~H~lv~~ 229 (233)
T 4df3_A 204 LMDGGLEIKDVVHLDPFDRDHAMIYA 229 (233)
T ss_dssp HHHTTCCEEEEEECTTTSTTEEEEEE
T ss_pred HHHCCCEEEEEEccCCCCCceEEEEE
Confidence 8899999999887754 4555544
No 109
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.49 E-value=0.00018 Score=47.76 Aligned_cols=80 Identities=11% Similarity=-0.047 Sum_probs=49.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++... ..+....+++++++.|+|||++++ ........... ....+...+ .++
T Consensus 148 ~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i-~~~~~~~~~~~------------------~~~~~~~~~-~~~ 203 (233)
T 2ipx_A 148 VDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVI-SIKANCIDSTA------------------SAEAVFASE-VKK 203 (233)
T ss_dssp EEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEE-EEEHHHHCSSS------------------CHHHHHHHH-HHT
T ss_pred EEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEE-EEcccccccCC------------------CHHHHHHHH-HHH
Confidence 499997433 334456789999999999999999 33221100000 000001123 588
Q ss_pred HHhCCCCeeEEEEcCCc---eEEEEEE
Q 048196 91 ATGAGFSGTRFEWFTCN---LWVRDFY 114 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~~---~~lie~~ 114 (115)
|+++||+.+++..+.+. +.++.++
T Consensus 204 l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 204 MQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp TGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred HHHCCCceEEEEecCCccCCcEEEEEE
Confidence 99999999987776543 5555554
No 110
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.49 E-value=0.00012 Score=49.62 Aligned_cols=62 Identities=13% Similarity=0.060 Sum_probs=47.9
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++....| ....+++++.+.|+|||++++.+.... +.+++.++
T Consensus 185 fD~Vv~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------~~~~v~~~ 230 (254)
T 2nxc_A 185 FDLLVANLYAE-----LHAALAPRYREALVPGGRALLTGILKD-----------------------------RAPLVREA 230 (254)
T ss_dssp EEEEEEECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------GHHHHHHH
T ss_pred CCEEEECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------CHHHHHHH
Confidence 49998754443 357899999999999999999654221 25789999
Q ss_pred HHhCCCCeeEEEEcCC
Q 048196 91 ATGAGFSGTRFEWFTC 106 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~ 106 (115)
++++||+.+++.....
T Consensus 231 l~~~Gf~~~~~~~~~~ 246 (254)
T 2nxc_A 231 MAGAGFRPLEEAAEGE 246 (254)
T ss_dssp HHHTTCEEEEEEEETT
T ss_pred HHHCCCEEEEEeccCC
Confidence 9999999988776644
No 111
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.47 E-value=5.8e-05 Score=50.97 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=38.2
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
+|+.+ +++. .|+|++..+++++.++ ..++|+++++.|+|||++++....
T Consensus 103 ~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 103 AKAEDLPFPSGAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CCTTSCCSCTTCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CcHHHCCCCCCCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 56666 5553 4999998876666433 689999999999999999997654
No 112
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.46 E-value=0.00016 Score=49.57 Aligned_cols=39 Identities=8% Similarity=0.101 Sum_probs=35.9
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++..++|+++.++...+++++.+.| |||++++.-.
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 49999999999999999999999999999 9999998643
No 113
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.44 E-value=0.00052 Score=45.19 Aligned_cols=84 Identities=15% Similarity=0.078 Sum_probs=52.5
Q ss_pred CCC--CCCCCc--ccEEEeccccccCChHH-----------------HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch
Q 048196 2 DDM--FQNVPK--GDAIFMKWILHNWSDDH-----------------CLKLLKIYYKSIPEDGKVIVVESILPELPETST 60 (115)
Q Consensus 2 gd~--~~~~p~--~D~v~~~~vlh~~~d~~-----------------~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~ 60 (115)
||. +.+++. .|+|++.-.+|..++.. ..++++++.+.|+|||++++.-.. .
T Consensus 111 ~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~----- 182 (230)
T 3evz_A 111 SNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD---K----- 182 (230)
T ss_dssp CSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES---C-----
T ss_pred CCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc---c-----
Confidence 453 334553 49999887776655422 378999999999999999985211 0
Q ss_pred hhhhchhccchhcccCCCceeCCHHHHHHHHHhCCCCeeEEEEcCC--ceEEEEE
Q 048196 61 VSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFTC--NLWVRDF 113 (115)
Q Consensus 61 ~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~--~~~lie~ 113 (115)
..+.+++.++++++||....+....+ ...++.+
T Consensus 183 --------------------~~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f 217 (230)
T 3evz_A 183 --------------------EKLLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIF 217 (230)
T ss_dssp --------------------HHHHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEE
T ss_pred --------------------HhHHHHHHHHHHHcCCceEEEEecCCCeEEEEEEE
Confidence 01246889999999997766544433 3344444
No 114
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.40 E-value=2.6e-05 Score=51.99 Aligned_cols=73 Identities=11% Similarity=0.063 Sum_probs=46.8
Q ss_pred ccEEEe-ccc--cccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHH
Q 048196 11 GDAIFM-KWI--LHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEF 87 (115)
Q Consensus 11 ~D~v~~-~~v--lh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~ 87 (115)
.|+|++ .+. .+++..+....+++++++.|+|||++++.+....... ....+ ........+++
T Consensus 129 fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-------~~~~~--------~~~~~~~~~~~ 193 (236)
T 1zx0_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGEL-------MKSKY--------SDITIMFEETQ 193 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHH-------TTTTC--------SCHHHHHHHHT
T ss_pred eEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHh-------hchhh--------hhhhhhccHHH
Confidence 499998 554 5566556677899999999999999998765421100 00000 01111224566
Q ss_pred HHHHHhCCCCe
Q 048196 88 LTLATGAGFSG 98 (115)
Q Consensus 88 ~~ll~~aGf~~ 98 (115)
...+.++||+.
T Consensus 194 ~~~l~~aGF~~ 204 (236)
T 1zx0_A 194 VPALLEAGFRR 204 (236)
T ss_dssp HHHHHHTTCCG
T ss_pred HHHHHHCCCCC
Confidence 77889999995
No 115
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.39 E-value=0.0018 Score=46.32 Aligned_cols=101 Identities=10% Similarity=0.019 Sum_probs=61.0
Q ss_pred CCCCCC-CCCcc--cEEEeccccccCChH-------------------------------HHHHHHHHHHhhCCCCCEEE
Q 048196 1 MDDMFQ-NVPKG--DAIFMKWILHNWSDD-------------------------------HCLKLLKIYYKSIPEDGKVI 46 (115)
Q Consensus 1 ~gd~~~-~~p~~--D~v~~~~vlh~~~d~-------------------------------~~~~iL~~~~~aL~pgg~li 46 (115)
+|.|+. .+|.. |+++.+++||=.++. +-..+|+..++.|+|||+++
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mv 206 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMV 206 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 478998 67853 999999999965541 23355888999999999998
Q ss_pred EEeeecCCCCC-C----chhhhhc-hhccchhc---------ccCCCceeCCHHHHHHHHHhCC-CCeeEE
Q 048196 47 VVESILPELPE-T----STVSKRN-SQLDVLMM---------TQNPSGKKRTKHEFLTLATGAG-FSGTRF 101 (115)
Q Consensus 47 i~d~~~~~~~~-~----~~~~~~~-~~~~l~~~---------~~~~~g~~rt~~e~~~ll~~aG-f~~~~~ 101 (115)
+.=...+.... . ...+.+. .+.++.-- ..+.--..+|.+|++++++++| |++.++
T Consensus 207 l~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 207 LTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred EEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 86654443210 0 0011111 11111000 0001223578999999999996 476654
No 116
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.33 E-value=0.00069 Score=48.92 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=59.8
Q ss_pred CCCCCC-CCCcc--cEEEeccccccCChHH-------------------------HHH------------HHHHHHhhCC
Q 048196 1 MDDMFQ-NVPKG--DAIFMKWILHNWSDDH-------------------------CLK------------LLKIYYKSIP 40 (115)
Q Consensus 1 ~gd~~~-~~p~~--D~v~~~~vlh~~~d~~-------------------------~~~------------iL~~~~~aL~ 40 (115)
+|.|+. .+|.. |+++.+++||=.++.. ..+ +|+..++.|+
T Consensus 137 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~ 216 (384)
T 2efj_A 137 PGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELI 216 (384)
T ss_dssp CSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred chhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 578999 67863 9999999999555321 212 2777789999
Q ss_pred CCCEEEEEeeecCCCC-CCchhhhh-chhccchhc---------ccCCCceeCCHHHHHHHHHhCC-CCeeEEE
Q 048196 41 EDGKVIVVESILPELP-ETSTVSKR-NSQLDVLMM---------TQNPSGKKRTKHEFLTLATGAG-FSGTRFE 102 (115)
Q Consensus 41 pgg~lii~d~~~~~~~-~~~~~~~~-~~~~~l~~~---------~~~~~g~~rt~~e~~~ll~~aG-f~~~~~~ 102 (115)
|||++++.=...+... .....+.+ ..+.++.-- ..+.--..+|.+|++++++++| |++.++.
T Consensus 217 pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 217 SRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp EEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 9999988655443320 10000001 011111000 0001123478999999999985 7776653
No 117
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.31 E-value=0.00016 Score=50.99 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=39.8
Q ss_pred CCCCCCCCc-ccEEEecccccc---CChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQNVPK-GDAIFMKWILHN---WSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
+|+++..+. .|+|++..++|+ ++.+...++++++++.|+|||++++...
T Consensus 252 ~d~~~~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 252 SNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CSTTTTCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccccccccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 566664343 599999999986 3556689999999999999999999764
No 118
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.25 E-value=0.00037 Score=48.53 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=50.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|++++..++|++ ..+|+++++.|+|||++++. +.|+-...+ ...+-.-.+-.+....++.+++.++
T Consensus 152 fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l--vkPqfe~~~------~~~~~~G~vrd~~~~~~~~~~v~~~ 218 (291)
T 3hp7_A 152 PSFASIDVSFISL-----NLILPALAKILVDGGQVVAL--VKPQFEAGR------EQIGKNGIVRESSIHEKVLETVTAF 218 (291)
T ss_dssp CSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE--ECGGGTSCG------GGCC-CCCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE--ECcccccCh------hhcCCCCccCCHHHHHHHHHHHHHH
Confidence 4999988888765 68999999999999999986 222211110 0011000000001123467899999
Q ss_pred HHhCCCCeeEEEEc
Q 048196 91 ATGAGFSGTRFEWF 104 (115)
Q Consensus 91 l~~aGf~~~~~~~~ 104 (115)
++++||.+..+..-
T Consensus 219 ~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 219 AVDYGFSVKGLDFS 232 (291)
T ss_dssp HHHTTEEEEEEEEC
T ss_pred HHHCCCEEEEEEEC
Confidence 99999998776543
No 119
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.14 E-value=0.00048 Score=43.36 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=29.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++...+|+ .++++++.+.|+|||++++.+.
T Consensus 95 ~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 95 PDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEee
Confidence 599999999987 5899999999999999998653
No 120
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.10 E-value=0.00079 Score=42.60 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=41.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++..++|++ ..+++++.+.|+|||++++..... .+..++.++
T Consensus 101 ~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~~~-----------------------------~~~~~~~~~ 146 (192)
T 1l3i_A 101 IDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAILL-----------------------------ETKFEAMEC 146 (192)
T ss_dssp EEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEECBH-----------------------------HHHHHHHHH
T ss_pred CCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEecCc-----------------------------chHHHHHHH
Confidence 5999998887643 689999999999999999865310 013678888
Q ss_pred HHhCCCCe
Q 048196 91 ATGAGFSG 98 (115)
Q Consensus 91 l~~aGf~~ 98 (115)
++++||..
T Consensus 147 l~~~g~~~ 154 (192)
T 1l3i_A 147 LRDLGFDV 154 (192)
T ss_dssp HHHTTCCC
T ss_pred HHHCCCce
Confidence 99999954
No 121
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.10 E-value=1.7e-05 Score=53.26 Aligned_cols=73 Identities=10% Similarity=-0.027 Sum_probs=44.3
Q ss_pred cEEEe-----ccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHH
Q 048196 12 DAIFM-----KWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHE 86 (115)
Q Consensus 12 D~v~~-----~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e 86 (115)
|.+++ ...++++++ ...+++++++.|||||++++.+........ ...+ .+-.....+.
T Consensus 130 D~i~~D~~~~~~~~~~~~~--~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~-------~~~~--------~~~~~~~~~~ 192 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQ--FNFIKNHAFRLLKPGGVLTYCNLTSWGELM-------KSKY--------SDITIMFEET 192 (236)
T ss_dssp EEEEECCCCCBGGGTTTHH--HHHHHHTHHHHEEEEEEEEECCHHHHHHHT-------TTTC--------SCHHHHHHHH
T ss_pred ceEEEeeeecccchhhhcc--hhhhhhhhhheeCCCCEEEEEecCCchhhh-------hhhh--------hhhhhhhHHH
Confidence 76653 455556655 579999999999999999875432111100 0000 0111123457
Q ss_pred HHHHHHhCCCCeeEE
Q 048196 87 FLTLATGAGFSGTRF 101 (115)
Q Consensus 87 ~~~ll~~aGf~~~~~ 101 (115)
+...|.++||+...+
T Consensus 193 ~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 193 QVPALLEAGFRRENI 207 (236)
T ss_dssp THHHHHHHTCCGGGE
T ss_pred HHHHHHHcCCeEEEE
Confidence 778888999997644
No 122
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.10 E-value=0.00092 Score=44.50 Aligned_cols=85 Identities=11% Similarity=0.034 Sum_probs=44.9
Q ss_pred cEEEeccccccCChHH------HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHH
Q 048196 12 DAIFMKWILHNWSDDH------CLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKH 85 (115)
Q Consensus 12 D~v~~~~vlh~~~d~~------~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~ 85 (115)
|.+....+...|+... ...+|+++++.|+|||++++.....+. ....+.. ..... .........+
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~~~~~----~~~~~----~~~~~~~~~~ 166 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDS-YEEAEIK----KRGLP----LLSKAYFLSE 166 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------------CCHHHHHSH
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEecccc-chhchhh----hcCCC----CCChhhcchH
Confidence 5554444444444321 146899999999999999995433332 1110000 00000 0000011123
Q ss_pred HHHHHHHhCCCCeeEEEEcC
Q 048196 86 EFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 86 e~~~ll~~aGf~~~~~~~~~ 105 (115)
|+.++++++||++..+....
T Consensus 167 el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 167 QYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHcCCCeeeeeecC
Confidence 59999999999988776553
No 123
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.05 E-value=0.0017 Score=43.48 Aligned_cols=49 Identities=14% Similarity=0.266 Sum_probs=37.8
Q ss_pred CCCCCCC------C--cccEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQNV------P--KGDAIFMKWILHNWSD-------DHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~~------p--~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
+|++++. + ..|+|++...++...+ +...++++++++.|+|||++++.+.
T Consensus 152 ~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 152 ADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp CCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred cccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 6777744 3 2499999876665543 6678999999999999999998544
No 124
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.05 E-value=9.6e-05 Score=48.95 Aligned_cols=64 Identities=8% Similarity=-0.057 Sum_probs=43.7
Q ss_pred CCCCCC--CC-c--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccC
Q 048196 2 DDMFQN--VP-K--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQN 76 (115)
Q Consensus 2 gd~~~~--~p-~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~ 76 (115)
+|+.+. .+ . .|+|+++ . +..++|+++++.|+|||+++ .
T Consensus 98 ~d~~~~~~~~~~~~fD~v~~~------~--~~~~~l~~~~~~LkpgG~l~-----------~------------------ 140 (226)
T 3m33_A 98 WNGKGELPAGLGAPFGLIVSR------R--GPTSVILRLPELAAPDAHFL-----------Y------------------ 140 (226)
T ss_dssp CCSCSSCCTTCCCCEEEEEEE------S--CCSGGGGGHHHHEEEEEEEE-----------E------------------
T ss_pred cchhhccCCcCCCCEEEEEeC------C--CHHHHHHHHHHHcCCCcEEE-----------E------------------
Confidence 566553 33 3 3999876 1 24688999999999999998 0
Q ss_pred CCceeCCHHHHHHHHHhCCCCeeEEEE
Q 048196 77 PSGKKRTKHEFLTLATGAGFSGTRFEW 103 (115)
Q Consensus 77 ~~g~~rt~~e~~~ll~~aGf~~~~~~~ 103 (115)
.+...+.+++.++++++||+..++..
T Consensus 141 -~~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 141 -VGPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp -EESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred -eCCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 00012345788888888888776543
No 125
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.02 E-value=0.00085 Score=43.29 Aligned_cols=56 Identities=9% Similarity=-0.177 Sum_probs=38.5
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHHHH--hCCCCeeEEEEcC-
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLAT--GAGFSGTRFEWFT- 105 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~~~- 105 (115)
.++++++++.|+|||++++++... ...+++.++++ ++||..+++....
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~ 194 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVGH-----------------------------NQADEVARLFAPWRERGFRVRKVKDLR 194 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECTT-----------------------------SCHHHHHHHTGGGGGGTEECCEEECTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEECC-----------------------------ccHHHHHHHHHHhhcCCceEEEEEecC
Confidence 788999999999999966654310 12357778888 8898887766553
Q ss_pred CceEEEEE
Q 048196 106 CNLWVRDF 113 (115)
Q Consensus 106 ~~~~lie~ 113 (115)
+...++.+
T Consensus 195 ~~~r~~~~ 202 (215)
T 4dzr_A 195 GIDRVIAV 202 (215)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 44454444
No 126
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.94 E-value=0.0021 Score=44.62 Aligned_cols=69 Identities=10% Similarity=0.066 Sum_probs=45.2
Q ss_pred ccEEEeccccccCChHHH--HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHC--LKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFL 88 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~ 88 (115)
.|+|++....+.+++... .+++++++++|+|||.+++... .+ . . . ..+..++.
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~---~-------~---------~--~~~~~~~~ 224 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE----SI---W-------L---------D--LELIEKMS 224 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC----CT---T-------T---------C--HHHHHHHH
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC----Cc---c-------c---------c--hHHHHHHH
Confidence 499999776666554332 6899999999999999998631 10 0 0 0 12357899
Q ss_pred HHHHhCCCCeeEEEEc
Q 048196 89 TLATGAGFSGTRFEWF 104 (115)
Q Consensus 89 ~ll~~aGf~~~~~~~~ 104 (115)
+.++++||..+++...
T Consensus 225 ~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 225 RFIRETGFASVQYALM 240 (304)
T ss_dssp HHHHHHTCSEEEEEEC
T ss_pred HHHHhCCCCcEEEEEe
Confidence 9999999998887654
No 127
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.92 E-value=0.0012 Score=45.59 Aligned_cols=82 Identities=7% Similarity=-0.058 Sum_probs=56.4
Q ss_pred CCCCCCCC-c-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee--ecCCCCCCchhhhhchhccchhcccCC
Q 048196 2 DDMFQNVP-K-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES--ILPELPETSTVSKRNSQLDVLMMTQNP 77 (115)
Q Consensus 2 gd~~~~~p-~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~--~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (115)
+|+....| . +|++++.-++|++.+++....+ ++.++|+|+|.++-.+. +...++.
T Consensus 188 ~D~~~~~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~g-------------------- 246 (281)
T 3lcv_B 188 ADLLEDRLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKG-------------------- 246 (281)
T ss_dssp CCTTTSCCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------C--------------------
T ss_pred eeecccCCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcc--------------------
Confidence 57777444 3 5999999999999998877888 99999999999888776 2222211
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEcCC
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWFTC 106 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 106 (115)
-...-...|++++.+.|... +...+++
T Consensus 247 -m~~~Y~~~~e~~~~~~g~~~-~~~~~~n 273 (281)
T 3lcv_B 247 -MFQNYSQSFESQARERSCRI-QRLEIGN 273 (281)
T ss_dssp -HHHHHHHHHHHHHHHHTCCE-EEEEETT
T ss_pred -hhhHHHHHHHHHHHhcCCce-eeeeecC
Confidence 00112468999999999744 4444433
No 128
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.89 E-value=0.0043 Score=41.75 Aligned_cols=59 Identities=10% Similarity=0.116 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHHHHhCCCCeeEEEEcC-
Q 048196 27 HCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWFT- 105 (115)
Q Consensus 27 ~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~- 105 (115)
....+++.+.+.|+|||+++++ .+. ....++.++++++||...++.++.
T Consensus 154 ~~~~~l~~~~~~LkpgG~l~~~---~~~---------------------------~~~~~~~~~l~~~~~~~~~~~~v~~ 203 (259)
T 3lpm_A 154 TLEDTIRVAASLLKQGGKANFV---HRP---------------------------ERLLDIIDIMRKYRLEPKRIQFVHP 203 (259)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE---ECT---------------------------TTHHHHHHHHHHTTEEEEEEEEEES
T ss_pred CHHHHHHHHHHHccCCcEEEEE---EcH---------------------------HHHHHHHHHHHHCCCceEEEEEeec
Confidence 3567999999999999999983 111 123577888888999888776652
Q ss_pred -----CceEEEEEEC
Q 048196 106 -----CNLWVRDFYK 115 (115)
Q Consensus 106 -----~~~~lie~~~ 115 (115)
....+++++|
T Consensus 204 ~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 204 RSDREANTVLVEGIK 218 (259)
T ss_dssp STTSCCSEEEEEEEE
T ss_pred CCCCCcEEEEEEEEe
Confidence 3456777654
No 129
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.86 E-value=2.9e-05 Score=52.23 Aligned_cols=85 Identities=12% Similarity=-0.023 Sum_probs=47.9
Q ss_pred ccEEEeccccccCCh-------------HHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCC
Q 048196 11 GDAIFMKWILHNWSD-------------DHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNP 77 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d-------------~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (115)
.|+|++.-.+|..++ +....+++++++.|+|||++.+++.+..... .. .....+... .
T Consensus 141 fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~------~~--l~~~g~~~~-~ 211 (254)
T 2h00_A 141 YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL------QL--KKRLRWYSC-M 211 (254)
T ss_dssp BSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHH------HH--GGGBSCEEE-E
T ss_pred ccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHH------hc--ccceEEEEE-C
Confidence 499999866665441 1123567888999999999988775443210 00 011111111 1
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.+...+.+++.++++++||+.+++...
T Consensus 212 ~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 212 LGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp ESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 244455689999999999999887665
No 130
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.80 E-value=0.0013 Score=40.88 Aligned_cols=41 Identities=7% Similarity=-0.010 Sum_probs=33.3
Q ss_pred ccEEEeccccccCChHH---------HHHHHHHHHhhCCCCCEEEEEeee
Q 048196 11 GDAIFMKWILHNWSDDH---------CLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~---------~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
.|+|++...+|..++.. ..++++++.+.|+|||++++....
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 49999998888776532 168999999999999999987653
No 131
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.78 E-value=0.001 Score=44.65 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=40.2
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccc-hhcccCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDV-LMMTQNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
.++|+++++.|+|||++++.- .+..... .. ...- .... .+....++.+++.++++++||++..+...
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~~--~p~~e~~--~~----~~~~~G~~~-d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAALI--KPQFEAG--RE----QVGKNGIIR-DPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEEE--CHHHHSC--HH----HHC-CCCCC-CHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHHHhccCCCEEEEEE--CcccccC--HH----HhCcCCeec-CcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 689999999999999999842 1110000 00 0000 0000 00112247789999999999998877544
No 132
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.73 E-value=0.00049 Score=48.70 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=39.1
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
||+.+ +.|. .|+|++..+++++..+.....+.++++.|+|||++++.
T Consensus 106 ~d~~~~~~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 106 GKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp SCTTTCCCSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cchhhCCCCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 56666 5554 59999999999998877788899999999999999854
No 133
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.72 E-value=0.001 Score=47.64 Aligned_cols=48 Identities=13% Similarity=0.279 Sum_probs=36.8
Q ss_pred CCCCCCCCc--ccEEEecccccc---CChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVPK--GDAIFMKWILHN---WSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|++++++. .|+|++...+|. .++....++++++.+.|+|||+++++.
T Consensus 282 ~D~~~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 282 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CSTTTTCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhccCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 677776664 499999999885 445556789999999999999999954
No 134
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.72 E-value=0.0022 Score=41.09 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=30.7
Q ss_pred ccEEEecccc-------ccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 11 GDAIFMKWIL-------HNWSDDHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 11 ~D~v~~~~vl-------h~~~d~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
.|+|++...+ +....++..++++++.+.|+|||++++....
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 4999987655 1122335678999999999999999997754
No 135
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.64 E-value=0.0011 Score=43.75 Aligned_cols=37 Identities=14% Similarity=0.057 Sum_probs=31.5
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++..++|++ ++ ....+.++.++|+|||.+|-.+
T Consensus 116 ~DvVLa~k~LHlL-~~-~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 116 YDVVFLLKMLPVL-KQ-QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEEEETCHHHH-HH-TTCCHHHHHHTCEEEEEEEEEE
T ss_pred cChhhHhhHHHhh-hh-hHHHHHHHHHHhCCCCEEEEeC
Confidence 4999999999999 43 4566669999999999888877
No 136
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.64 E-value=0.0052 Score=41.30 Aligned_cols=80 Identities=8% Similarity=-0.057 Sum_probs=45.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++.... + ++...+++++++.|+|||++++.-.....+... +-.+ ..++..+.
T Consensus 147 ~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~-------------------~~~e-~~~~~~~~ 202 (232)
T 3id6_C 147 VDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTK-------------------DPKE-IYKTEVEK 202 (232)
T ss_dssp EEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC-------C-------------------CSSS-STTHHHHH
T ss_pred eEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCC-------------------CHHH-HHHHHHHH
Confidence 5998865432 2 233445566777999999999962111100000 0000 11234556
Q ss_pred HHhCCCCeeEEEEcCC---ceEEEEEE
Q 048196 91 ATGAGFSGTRFEWFTC---NLWVRDFY 114 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~---~~~lie~~ 114 (115)
|+++||++.+...+.+ .+.++.++
T Consensus 203 L~~~gf~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 203 LENSNFETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp HHHTTEEEEEEEECTTTCSSCEEEEEE
T ss_pred HHHCCCEEEEEeccCCCcCceEEEEEE
Confidence 7789999999888854 36666654
No 137
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.59 E-value=0.0019 Score=43.14 Aligned_cols=66 Identities=9% Similarity=0.127 Sum_probs=46.2
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.+.++. .|+|++ +.++. .++++++.+.|+|||++++.....+
T Consensus 152 ~d~~~~~~~~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~-------------------------- 198 (255)
T 3mb5_A 152 KDIYEGIEEENVDHVIL-----DLPQP--ERVVEHAAKALKPGGFFVAYTPCSN-------------------------- 198 (255)
T ss_dssp SCGGGCCCCCSEEEEEE-----CSSCG--GGGHHHHHHHEEEEEEEEEEESSHH--------------------------
T ss_pred CchhhccCCCCcCEEEE-----CCCCH--HHHHHHHHHHcCCCCEEEEEECCHH--------------------------
Confidence 577666664 499886 45543 5789999999999999998642110
Q ss_pred eeCCHHHHHHHHHhCC--CCeeEEEE
Q 048196 80 KKRTKHEFLTLATGAG--FSGTRFEW 103 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aG--f~~~~~~~ 103 (115)
...++.++++++| |..+++..
T Consensus 199 ---~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 199 ---QVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp ---HHHHHHHHHHHTGGGBSCCEEEC
T ss_pred ---HHHHHHHHHHHcCCCccccEEEE
Confidence 1356777888888 87776544
No 138
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.52 E-value=0.00061 Score=50.41 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=39.4
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEE
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii 47 (115)
||+.+ ++|. .|+|++..+++++.+++....+.++++.|+|||.+++
T Consensus 214 ~d~~~~~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 214 GKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCTTTCCCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CchhhCccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 67777 6664 5999998888989888888889999999999999985
No 139
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.51 E-value=0.0071 Score=39.69 Aligned_cols=80 Identities=15% Similarity=0.149 Sum_probs=46.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++. +.+. ++...+++++++.|+|||++++.-...+ .+. .....+...+++..
T Consensus 127 fD~V~~~-~~~~---~~~~~~l~~~~r~LkpgG~l~i~~~~~~--------------~~~-----~~~~~~~~~~~~~~- 182 (210)
T 1nt2_A 127 VDLIYQD-IAQK---NQIEILKANAEFFLKEKGEVVIMVKARS--------------IDS-----TAEPEEVFKSVLKE- 182 (210)
T ss_dssp EEEEEEC-CCST---THHHHHHHHHHHHEEEEEEEEEEEEHHH--------------HCT-----TSCHHHHHHHHHHH-
T ss_pred eeEEEEe-ccCh---hHHHHHHHHHHHHhCCCCEEEEEEecCC--------------ccc-----cCCHHHHHHHHHHH-
Confidence 4999876 3322 3445679999999999999999721110 000 00000000123333
Q ss_pred HHhCCCCeeEEEEcC---CceEEEEEEC
Q 048196 91 ATGAGFSGTRFEWFT---CNLWVRDFYK 115 (115)
Q Consensus 91 l~~aGf~~~~~~~~~---~~~~lie~~~ 115 (115)
++++ |++.+..... ..+.++.+++
T Consensus 183 l~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 183 MEGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp HHTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred HHhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 7888 9999988774 3556666653
No 140
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.49 E-value=0.0028 Score=45.54 Aligned_cols=48 Identities=15% Similarity=0.088 Sum_probs=38.6
Q ss_pred CCCCCC-CC-c-ccEEEecccccc---CChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQN-VP-K-GDAIFMKWILHN---WSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~-~p-~-~D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|+++. .+ . .|+|++...+|+ ...+...++++++++.|+|||+++|+-
T Consensus 287 ~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 287 SDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 577773 33 2 499999999987 445667899999999999999999963
No 141
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.44 E-value=0.004 Score=43.28 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=32.5
Q ss_pred CCCCC-CCCc-ccEEEecccccc--------C-ChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHN--------W-SDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~--------~-~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
||+.+ +.+. .|+|+.....+. . ..+....+++.+++.|+|||++++..
T Consensus 113 gD~~~~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 113 GDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp SCGGGCCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccCCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 67776 4443 599997533221 0 12235689999999999999999853
No 142
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.42 E-value=0.012 Score=41.66 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=55.9
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhh-hchhccchhcccCCC-ceeCCHHHHHH
Q 048196 12 DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSK-RNSQLDVLMMTQNPS-GKKRTKHEFLT 89 (115)
Q Consensus 12 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~-g~~rt~~e~~~ 89 (115)
.+++.--+|++++.++..++|+.+.+.. |+|.+++.|.+.+..+..+ ..+ +...+.-..-....+ ..-.|.++..+
T Consensus 196 tl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~-fg~~m~~~l~~~rg~~l~~~~~y~s~~~~~~ 273 (334)
T 1rjd_A 196 TIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDR-FGAIMQSNLKESRNLEMPTLMTYNSKEKYAS 273 (334)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCC-HHHHHHHHHHHHHCCCCTTTTTTCSHHHHHG
T ss_pred EEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcch-HHHHHHHHhhcccCCcccccccCCCHHHHHH
Confidence 6788889999999999999999999877 7888889999877332222 111 100010000000111 13358899999
Q ss_pred HHHhCCCC
Q 048196 90 LATGAGFS 97 (115)
Q Consensus 90 ll~~aGf~ 97 (115)
.|+++||+
T Consensus 274 rl~~~Gf~ 281 (334)
T 1rjd_A 274 RWSAAPNV 281 (334)
T ss_dssp GGTTSSEE
T ss_pred HHHHCCCC
Confidence 99999997
No 143
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.34 E-value=0.0047 Score=39.14 Aligned_cols=73 Identities=10% Similarity=0.066 Sum_probs=43.2
Q ss_pred ccEEEecc-ccccC------ChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCC
Q 048196 11 GDAIFMKW-ILHNW------SDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRT 83 (115)
Q Consensus 11 ~D~v~~~~-vlh~~------~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt 83 (115)
.|++++.. .+++- ..+...++|+++.+.|+|||++++..+...+.. .. ....
T Consensus 90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~--------------------~~~~ 148 (185)
T 3mti_A 90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGG-DM--------------------EKDA 148 (185)
T ss_dssp EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-------CH--------------------HHHH
T ss_pred cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCC-HH--------------------HHHH
Confidence 49998763 33220 235567899999999999999999764322211 00 0011
Q ss_pred HHHHHHHHHhCCCCeeEEEEc
Q 048196 84 KHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~~~~~~ 104 (115)
..+|.+.+...+|...+....
T Consensus 149 ~~~~~~~l~~~~~~~~~~~~~ 169 (185)
T 3mti_A 149 VLEYVIGLDQRVFTAMLYQPL 169 (185)
T ss_dssp HHHHHHHSCTTTEEEEEEEES
T ss_pred HHHHHHhCCCceEEEEEehhh
Confidence 346666666778888777665
No 144
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.21 E-value=0.0086 Score=42.66 Aligned_cols=48 Identities=6% Similarity=-0.174 Sum_probs=37.3
Q ss_pred CCCCCCCCc-----ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 2 DDMFQNVPK-----GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 2 gd~~~~~p~-----~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
||+++++|. .|+|++...+|... ..++++++.++|+|||++++.+...
T Consensus 228 ~D~~~~l~~~~~~~fD~Vi~~~p~~~~~---~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 228 FDLRKPLPDYALHKFDTFITDPPETLEA---IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CCTTSCCCTTTSSCBSEEEECCCSSHHH---HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ChhhhhchhhccCCccEEEECCCCchHH---HHHHHHHHHHHcccCCeEEEEEEec
Confidence 788775542 49999988776542 4899999999999999887777654
No 145
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.18 E-value=0.029 Score=38.30 Aligned_cols=70 Identities=10% Similarity=0.151 Sum_probs=48.5
Q ss_pred CCCCCCCC-c-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVP-K-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p-~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
||.++..+ . .|+|++.... ...++++++.+.|+|||.+++.++......
T Consensus 182 ~D~~~~~~~~~fD~Vi~~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----------------------- 232 (278)
T 2frn_A 182 MDNRDFPGENIADRILMGYVV------RTHEFIPKALSIAKDGAIIHYHNTVPEKLM----------------------- 232 (278)
T ss_dssp SCTTTCCCCSCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------
T ss_pred CCHHHhcccCCccEEEECCch------hHHHHHHHHHHHCCCCeEEEEEEeeccccc-----------------------
Confidence 67777333 2 4999874331 236789999999999999999887542110
Q ss_pred eeCCHHHHHHHHHhCCCCeeE
Q 048196 80 KKRTKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~ 100 (115)
.....+++.+.++++||+...
T Consensus 233 ~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 233 PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp TTTTHHHHHHHHHHTTCEEEE
T ss_pred cccHHHHHHHHHHHcCCeeEE
Confidence 012357888999999998765
No 146
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.08 E-value=0.031 Score=39.55 Aligned_cols=88 Identities=9% Similarity=-0.008 Sum_probs=56.1
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC-ceeCCHHHHHHH
Q 048196 12 DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS-GKKRTKHEFLTL 90 (115)
Q Consensus 12 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-g~~rt~~e~~~l 90 (115)
=+++.--++.+++.++..++|+.+.+..+ +|.+++.|.+.+.++.+....+........+ .+ ..-.|.++..+.
T Consensus 193 tl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~fg~~M~~~l~~~g~pl----~sl~~y~t~~~~~~r 267 (334)
T 3iei_A 193 TLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDRFGQIMIENLRRRQCDL----AGVETCKSLESQKER 267 (334)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSHHHHHHHHHHHTTTCCC----TTGGGGGCHHHHHHH
T ss_pred EEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCHHHHHHHHHHHHhCCCC----cccccCCCHHHHHHH
Confidence 46666679999999999999999998764 5667778988554321100000000011110 01 123578899999
Q ss_pred HHhCCCCeeEEEEc
Q 048196 91 ATGAGFSGTRFEWF 104 (115)
Q Consensus 91 l~~aGf~~~~~~~~ 104 (115)
|.++||+.+++...
T Consensus 268 ~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 268 LLSNGWETASAVDM 281 (334)
T ss_dssp HHTTTCSEEEEEEH
T ss_pred HHHcCCCcceeecH
Confidence 99999998776554
No 147
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.02 E-value=0.0073 Score=44.22 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=34.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPEL 55 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~ 55 (115)
.|+|++.++++ . ++....|+++.+.|+|||++++.+...+..
T Consensus 324 FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 324 CDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp CSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred CCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 59999887773 2 345678899999999999999998776654
No 148
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.90 E-value=0.0082 Score=41.92 Aligned_cols=42 Identities=7% Similarity=0.101 Sum_probs=31.7
Q ss_pred CCCCCCCC--cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVP--KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
||..+ +| ..|+|++... .+ +..++++++++.|+|||++++.+
T Consensus 179 gDa~~-l~d~~FDvV~~~a~---~~--d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 179 GDETV-IDGLEFDVLMVAAL---AE--PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SCGGG-GGGCCCSEEEECTT---CS--CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred Cchhh-CCCCCcCEEEECCC---cc--CHHHHHHHHHHHcCCCcEEEEEc
Confidence 45554 33 2499998654 23 35799999999999999999976
No 149
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=95.78 E-value=0.0029 Score=46.12 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=31.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
.|+|+.. ..|+++ +..+.|+++++.|+|||.+++.|..
T Consensus 289 FDlVisd-gsH~~~--d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 289 FDIVIDD-GSHINA--HVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EEEEEEC-SCCCHH--HHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccEEEEC-Ccccch--hHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4999865 567664 3578999999999999999998865
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.76 E-value=0.0055 Score=41.60 Aligned_cols=41 Identities=17% Similarity=0.366 Sum_probs=30.9
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|+.+.++. .|+|++ +.++. .++++++.+.|+|||++++..
T Consensus 171 ~d~~~~~~~~~~D~V~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 171 RDISEGFDEKDVDALFL-----DVPDP--WNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CCGGGCCSCCSEEEEEE-----CCSCG--GGTHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHcccCCccCEEEE-----CCcCH--HHHHHHHHHHcCCCCEEEEEe
Confidence 566665553 499987 34443 588999999999999999976
No 151
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.76 E-value=0.018 Score=40.10 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCCC-CCCcccEEEeccccc---cCChHH-HHHHHHHHHhhCCCCCEEEE
Q 048196 3 DMFQ-NVPKGDAIFMKWILH---NWSDDH-CLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 3 d~~~-~~p~~D~v~~~~vlh---~~~d~~-~~~iL~~~~~aL~pgg~lii 47 (115)
|+++ +....|+|++...++ ...|.. ...+|+.+++.|+|||.+++
T Consensus 140 D~~~l~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 140 DVFFIPPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ccccCCcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 6665 222469999876653 223332 23689999999999998877
No 152
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=95.69 E-value=0.013 Score=37.51 Aligned_cols=39 Identities=21% Similarity=0.122 Sum_probs=28.9
Q ss_pred ccEEEeccccccCC----hHH-----HHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHNWS----DDH-----CLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~~~----d~~-----~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++...+|... |.. ..++++++++.|+|||++++..
T Consensus 107 fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 107 IDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 49999887777532 221 2358999999999999998743
No 153
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.62 E-value=0.0048 Score=39.88 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=31.5
Q ss_pred CCCCCCCC-c--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQNVP-K--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~~p-~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
||..+..+ . .|+|++..++|++++ ++.+.|+|||++++.-.
T Consensus 132 ~d~~~~~~~~~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 132 GDGWQGWQARAPFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp SCGGGCCGGGCCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEEC
T ss_pred CCcccCCccCCCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEc
Confidence 56655333 2 499999999999987 46789999999998543
No 154
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.61 E-value=0.0059 Score=39.62 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=31.1
Q ss_pred CCCCCCCC-c--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVP-K--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p-~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|+..+++ . .|+|++..++|++++ ++.+.|+|||++++.-
T Consensus 135 ~d~~~~~~~~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 135 GDGTLGYEPLAPYDRIYTTAAGPKIPE--------PLIRQLKDGGKLLMPV 177 (215)
T ss_dssp SCGGGCCGGGCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred CCcccCCCCCCCeeEEEECCchHHHHH--------HHHHHcCCCcEEEEEE
Confidence 45544444 2 499999999999884 6788999999999864
No 155
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.55 E-value=0.051 Score=34.49 Aligned_cols=42 Identities=10% Similarity=-0.104 Sum_probs=33.3
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHh--hCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYK--SIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~--aL~pgg~lii~d~~~~ 53 (115)
.|+|++...+|.. .++..++++++.+ .|+|||.+++......
T Consensus 114 fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 114 VDLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ccEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 4999998877654 4567899999998 9999999999665433
No 156
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.48 E-value=0.028 Score=36.52 Aligned_cols=64 Identities=13% Similarity=0.109 Sum_probs=44.1
Q ss_pred CCCCCCC---CcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNV---PKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~---p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||+.+.+ +..|++++...+ + .. +++++.+.|+|||++++.....
T Consensus 111 ~d~~~~~~~~~~~D~v~~~~~~----~--~~-~l~~~~~~LkpgG~lv~~~~~~-------------------------- 157 (204)
T 3njr_A 111 GTAPAALADLPLPEAVFIGGGG----S--QA-LYDRLWEWLAPGTRIVANAVTL-------------------------- 157 (204)
T ss_dssp SCTTGGGTTSCCCSEEEECSCC----C--HH-HHHHHHHHSCTTCEEEEEECSH--------------------------
T ss_pred CchhhhcccCCCCCEEEECCcc----c--HH-HHHHHHHhcCCCcEEEEEecCc--------------------------
Confidence 5666532 245999987644 2 23 9999999999999998844211
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEE
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~ 101 (115)
.+..++.+++++.|+++.++
T Consensus 158 ---~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 158 ---ESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp ---HHHHHHHHHHHHHCSEEEEE
T ss_pred ---ccHHHHHHHHHhCCCcEEEE
Confidence 02357778888888877664
No 157
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.43 E-value=0.019 Score=39.20 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=31.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCC---C--CCEEEEE
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIP---E--DGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~---p--gg~lii~ 48 (115)
.|+|+++.++|+.++ ...+++.+.+.|+ | ||+++++
T Consensus 164 fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 164 FQVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp BSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 499999999988655 5789999999999 9 9998773
No 158
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.40 E-value=0.039 Score=35.91 Aligned_cols=38 Identities=13% Similarity=-0.019 Sum_probs=28.5
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++... .+....+++++.+.|+|||.+++.+....
T Consensus 134 fD~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 134 FDFIFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp CSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred cCEEEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 488886543 33457899999999999998887665544
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=95.35 E-value=0.0076 Score=42.59 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=34.0
Q ss_pred CCCCC-CCCc--ccEEEeccccccCC-hHHHHHHHHHHHhhCCCCCEEEE
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWS-DDHCLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~lii 47 (115)
||+.+ ++|. .|+|++..+.|.+. .+....+++.+.+.|+|||.++.
T Consensus 122 ~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 122 GKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp SCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 57777 6663 49999877655442 23357899999999999999874
No 160
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.27 E-value=0.12 Score=34.44 Aligned_cols=78 Identities=6% Similarity=-0.020 Sum_probs=54.5
Q ss_pred CCCCCCCCc---ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNVPK---GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~p~---~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||.+++++. .|++++..+ ..+....||..+.+.|+|+|++++. .. .
T Consensus 73 ~d~l~~l~~~~~~D~IviaG~----Gg~~i~~Il~~~~~~L~~~~~lVlq-~~---~----------------------- 121 (225)
T 3kr9_A 73 ANGLAAFEETDQVSVITIAGM----GGRLIARILEEGLGKLANVERLILQ-PN---N----------------------- 121 (225)
T ss_dssp CSGGGGCCGGGCCCEEEEEEE----CHHHHHHHHHHTGGGCTTCCEEEEE-ES---S-----------------------
T ss_pred CchhhhcccCcCCCEEEEcCC----ChHHHHHHHHHHHHHhCCCCEEEEE-CC---C-----------------------
Confidence 677776662 598887654 4455789999999999999998772 11 0
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc--C-CceEEEEEE
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF--T-CNLWVRDFY 114 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~--~-~~~~lie~~ 114 (115)
..+..+++|.+.||.+.+..-+ . -.+.++.+.
T Consensus 122 ----~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 122 ----REDDLRIWLQDHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp ----CHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred ----CHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 1357889999999998875432 2 345566554
No 161
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=95.27 E-value=0.0086 Score=40.67 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=32.1
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
||+.++++. .|+|++ ++++. .++|+++.+.|+|||++++..
T Consensus 169 ~d~~~~~~~~~fD~Vi~-----~~~~~--~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 169 SDIADFISDQMYDAVIA-----DIPDP--WNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp SCTTTCCCSCCEEEEEE-----CCSCG--GGSHHHHHHTEEEEEEEEEEE
T ss_pred CchhccCcCCCccEEEE-----cCcCH--HHHHHHHHHHcCCCCEEEEEe
Confidence 677775554 499987 45543 589999999999999999976
No 162
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.21 E-value=0.019 Score=35.84 Aligned_cols=63 Identities=11% Similarity=0.137 Sum_probs=42.6
Q ss_pred CCCCCCCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
+|+.++++. .|+|++..+ +....+++++++. |||++++.+...+
T Consensus 90 ~d~~~~~~~~~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~-------------------------- 135 (183)
T 2yxd_A 90 GRAEDVLDKLEFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIVLE-------------------------- 135 (183)
T ss_dssp SCHHHHGGGCCCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH--------------------------
T ss_pred CCccccccCCCCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEecccc--------------------------
Confidence 344444443 599999888 2246788888887 9999998662110
Q ss_pred eeCCHHHHHHHHHhCCCCeeEE
Q 048196 80 KKRTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~~~ 101 (115)
+..++.++++++||....+
T Consensus 136 ---~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 136 ---NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ---HHHHHHHHHHHTTCEEEEE
T ss_pred ---cHHHHHHHHHHcCCeEEEE
Confidence 1357888899999766543
No 163
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.21 E-value=0.0059 Score=43.60 Aligned_cols=50 Identities=10% Similarity=0.121 Sum_probs=37.3
Q ss_pred CCCCC-CCCc-ccEEEeccccccCCh-HHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSD-DHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
||+.+ ++|. .|+|++..+.|.... .....+++++.+.|+|||.+++.+..
T Consensus 119 ~d~~~~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 119 GSVEDISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp SCGGGCCCSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred CchhhcCcCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 56666 4554 599999776666653 33677999999999999999876653
No 164
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.21 E-value=0.0066 Score=52.78 Aligned_cols=82 Identities=11% Similarity=0.087 Sum_probs=31.5
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|+.+++||.-++. .+.|+++++.|+|||++++.+...... -.. ....++-. ...++...+.++|.++
T Consensus 1312 ydlvia~~vl~~t~~~--~~~l~~~~~lL~p~G~l~~~e~~~~~~-~g~----~~~~~~~~---~r~~~~~~~~~~w~~~ 1381 (2512)
T 2vz8_A 1312 ADLLVCNCALATLGDP--AVAVGNMAATLKEGGFLLLHTLLAGHP-LGE----MVGFLTSP---EQGGRHLLSQDQWESL 1381 (2512)
T ss_dssp CCEEEEECC----------------------CCEEEEEEC----------------------------------CTTTTS
T ss_pred eeEEEEcccccccccH--HHHHHHHHHhcCCCcEEEEEecccccc-ccc----cccccccc---cccCCcccCHHHHHHH
Confidence 4999999999976654 578999999999999999977532100 000 00000000 0011223467799999
Q ss_pred HHhCCCCeeEEE
Q 048196 91 ATGAGFSGTRFE 102 (115)
Q Consensus 91 l~~aGf~~~~~~ 102 (115)
|+++||..+...
T Consensus 1382 l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1382 FAGASLHLVALK 1393 (2512)
T ss_dssp STTTTEEEEEEE
T ss_pred HHhCCCceeeec
Confidence 999999887654
No 165
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.17 E-value=0.011 Score=38.75 Aligned_cols=41 Identities=15% Similarity=0.040 Sum_probs=31.5
Q ss_pred CCCCCCCC-c--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQNVP-K--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~~p-~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
||+.+..+ . .|+|++..++|++++ ++.+.|+|||++++...
T Consensus 123 ~d~~~~~~~~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 123 GDGTLGYEEEKPYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp SCGGGCCGGGCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred CCcccccccCCCccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEc
Confidence 45555333 2 499999999999885 47789999999999753
No 166
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.12 E-value=0.19 Score=38.62 Aligned_cols=88 Identities=16% Similarity=0.114 Sum_probs=56.8
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhc-ccCCC-ceeCCHHHHHH
Q 048196 12 DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMM-TQNPS-GKKRTKHEFLT 89 (115)
Q Consensus 12 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-g~~rt~~e~~~ 89 (115)
=++++--+|.+++.++..++|+.+.+ + |+|.+++.|.+.+..+..+. .+.. ...+... ..... ....+.++..+
T Consensus 219 tl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f-~~~m-~~~~~~~g~~l~~~~~~~~~~~~~~ 294 (695)
T 2zwa_A 219 KVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPF-SKQM-LAHFKRNDSPLQSVLKYNTIESQVQ 294 (695)
T ss_dssp EEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHH-HHHH-HHHHHHTTCCCCGGGTCCSHHHHHH
T ss_pred EEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChH-HHHH-HHHHHHcCCCCCccccCCCHHHHHH
Confidence 45666679999999999999999984 5 68889899988775433321 1110 0111100 00001 12347899999
Q ss_pred HHHhCCCCeeEEEE
Q 048196 90 LATGAGFSGTRFEW 103 (115)
Q Consensus 90 ll~~aGf~~~~~~~ 103 (115)
.|+++||+.+....
T Consensus 295 ~~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 295 RFNKLGFAYVNVGD 308 (695)
T ss_dssp HHHHTTCCEEEEEE
T ss_pred HHHHCCCCCcceee
Confidence 99999998766543
No 167
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.08 E-value=0.057 Score=36.78 Aligned_cols=47 Identities=11% Similarity=0.141 Sum_probs=38.1
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|+.. +.|. +|++++.-++|++.+.+....+ ++.++|++++.++-.+
T Consensus 158 ~D~~~~~~~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 158 QDVLCAPPAEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CCTTTSCCCCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred eecccCCCCCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 57777 4454 5999999999999988777776 8999999997777766
No 168
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=95.07 E-value=0.023 Score=37.65 Aligned_cols=61 Identities=10% Similarity=0.062 Sum_probs=43.4
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++..+ .+ ...+++.+.+.|+|||++++.+. . ... ...+++.+.
T Consensus 142 fD~V~~~~~----~~--~~~~l~~~~~~LkpgG~l~~~~g----~-~~~----------------------~~~~~~~~~ 188 (240)
T 1xdz_A 142 YDIVTARAV----AR--LSVLSELCLPLVKKNGLFVALKA----A-SAE----------------------EELNAGKKA 188 (240)
T ss_dssp EEEEEEECC----SC--HHHHHHHHGGGEEEEEEEEEEEC----C--CH----------------------HHHHHHHHH
T ss_pred ccEEEEecc----CC--HHHHHHHHHHhcCCCCEEEEEeC----C-Cch----------------------HHHHHHHHH
Confidence 499998763 22 57899999999999999988521 0 000 012577888
Q ss_pred HHhCCCCeeEEEEc
Q 048196 91 ATGAGFSGTRFEWF 104 (115)
Q Consensus 91 l~~aGf~~~~~~~~ 104 (115)
++++||+..++...
T Consensus 189 l~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 189 ITTLGGELENIHSF 202 (240)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHcCCeEeEEEEE
Confidence 99999998876543
No 169
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=94.80 E-value=0.062 Score=35.90 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=29.9
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPE 54 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~ 54 (115)
.|+|++... .+.....++++.+.|+|||.+++-+.....
T Consensus 137 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 137 FDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 498887543 344567899999999999999987766554
No 170
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.77 E-value=0.061 Score=34.83 Aligned_cols=47 Identities=13% Similarity=0.192 Sum_probs=31.4
Q ss_pred CCCCC-C--CCc--ccEEEeccccccCChH------HHHHHHHHHHhhCCCCCEEEEE
Q 048196 2 DDMFQ-N--VPK--GDAIFMKWILHNWSDD------HCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 2 gd~~~-~--~p~--~D~v~~~~vlh~~~d~------~~~~iL~~~~~aL~pgg~lii~ 48 (115)
||..+ + ++. .|+|++....+..... ....+++++.+.|+|||.+++.
T Consensus 98 ~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 98 VDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp CCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 55655 3 443 4999987554322111 1257999999999999999884
No 171
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.72 E-value=0.0099 Score=39.51 Aligned_cols=41 Identities=10% Similarity=0.138 Sum_probs=31.2
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|+.+ +++. .|+|++ ++++. .++|+++.+.|+|||++++..
T Consensus 155 ~d~~~~~~~~~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 155 GKLEEAELEEAAYDGVAL-----DLMEP--WKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp SCGGGCCCCTTCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEE
T ss_pred CchhhcCCCCCCcCEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEe
Confidence 56666 3653 499987 35543 488999999999999999976
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=94.59 E-value=0.017 Score=38.12 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=30.7
Q ss_pred CCCCCCCCc---ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVPK---GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p~---~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
||+..+++. .|+|++..++|++++ ++.+.|+|||++++.-
T Consensus 147 ~d~~~~~~~~~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 147 GDGSKGFPPKAPYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp SCGGGCCGGGCCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred CCcccCCCCCCCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEE
Confidence 455335542 499999999999885 5678999999999854
No 173
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.59 E-value=0.018 Score=37.81 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=30.3
Q ss_pred CCCCCCCCc---ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 2 DDMFQNVPK---GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 2 gd~~~~~p~---~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
||..++++. .|+|+....+|+++ +++.+.|+|||++++.
T Consensus 152 ~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 152 GDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVP 193 (227)
T ss_dssp SCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEE
T ss_pred CCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEE
Confidence 455554443 39999999999876 5678899999999885
No 174
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.55 E-value=0.036 Score=37.10 Aligned_cols=42 Identities=14% Similarity=0.036 Sum_probs=31.0
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
+|+.+ +++. .|+|+...+. ..++++++.|+|||++++.....
T Consensus 137 ~d~~~~~~~~~~fD~v~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 137 ASSHRLPFSDTSMDAIIRIYAP---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CCTTSCSBCTTCEEEEEEESCC---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred cchhhCCCCCCceeEEEEeCCh---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 45555 4443 3999986653 35889999999999999987654
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.54 E-value=0.019 Score=40.20 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=33.5
Q ss_pred CCCCC-CCC-c-ccEEEeccccccCCh-HHHHHHHHHHHhhCCCCCEEEE
Q 048196 2 DDMFQ-NVP-K-GDAIFMKWILHNWSD-DHCLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 2 gd~~~-~~p-~-~D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~lii 47 (115)
||+.+ ++| . .|+|++..+.+.+.. +....+++++.+.|+|||+++.
T Consensus 94 ~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 94 GKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 56666 566 3 499998866554432 2356899999999999999974
No 176
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.46 E-value=0.031 Score=39.29 Aligned_cols=45 Identities=18% Similarity=0.255 Sum_probs=32.2
Q ss_pred CCCCC-CCC-c-ccEEEeccccccCC-hHHHHHHHHHHHhhCCCCCEEE
Q 048196 2 DDMFQ-NVP-K-GDAIFMKWILHNWS-DDHCLKLLKIYYKSIPEDGKVI 46 (115)
Q Consensus 2 gd~~~-~~p-~-~D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~li 46 (115)
||+.+ ++| . .|+|++..+.+.+. ......+|+++.+.|+|||+++
T Consensus 120 ~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 120 GKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred eeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 56766 566 3 49999876432221 2335789999999999999987
No 177
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=94.44 E-value=0.017 Score=36.75 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=28.9
Q ss_pred ccEEEecccccc----CChHH-----HHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHN----WSDDH-----CLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~----~~d~~-----~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++...+|. ..|.. ..++++++.+.|+|||++++...
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 499998654442 22321 15889999999999999998754
No 178
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.42 E-value=0.049 Score=35.98 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=29.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++... .+....+++++.+.|+|||++++.+...+
T Consensus 148 fD~I~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 148 IDLFFLDAD-----KENYPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp EEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred cCEEEEeCC-----HHHHHHHHHHHHHHcCCCeEEEEEccccC
Confidence 499987643 33456889999999999999998665444
No 179
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.41 E-value=0.021 Score=37.34 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=30.1
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
.|+|++....|++.+ ..++++.+ +.|+|||.+++.+...
T Consensus 135 fD~V~~d~~~~~~~~--~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 135 LDMVFLDHWKDRYLP--DTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp CSEEEECSCGGGHHH--HHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred eEEEEEcCCcccchH--HHHHHHhc-cccCCCeEEEEeCCCC
Confidence 499999887777654 35677777 8999999998865543
No 180
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=94.27 E-value=0.06 Score=35.96 Aligned_cols=38 Identities=13% Similarity=0.045 Sum_probs=29.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++.. +.+.....++++.+.|+|||.+++.+....
T Consensus 137 fD~V~~d~-----~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 137 FDLIFIDA-----DKPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp CSEEEECS-----CGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred eEEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 49998743 344467899999999999999988665444
No 181
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.15 E-value=0.023 Score=39.43 Aligned_cols=41 Identities=27% Similarity=0.429 Sum_probs=31.2
Q ss_pred CCCCCCCC-c--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQNVP-K--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~~p-~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
||+.+..+ . .|+|++..++|+++ +++.+.|+|||++++...
T Consensus 133 ~d~~~~~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 133 GDGYYGVPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SCGGGCCGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred CChhhccccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 45555332 2 49999999999988 356779999999999753
No 182
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=94.03 E-value=0.044 Score=38.42 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=36.7
Q ss_pred CCCCCCCC-c-ccEEEeccccccCChHHH----------------HHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNVP-K-GDAIFMKWILHNWSDDHC----------------LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~p-~-~D~v~~~~vlh~~~d~~~----------------~~iL~~~~~aL~pgg~lii~d 49 (115)
||.+++.+ . .|+|+..--++.++.++. ..+++++.+.|+|||+++++-
T Consensus 191 ~D~l~~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 191 QDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp SCTTSCCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 67777544 3 599999888777765442 268999999999999998854
No 183
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=93.99 E-value=0.029 Score=36.00 Aligned_cols=41 Identities=7% Similarity=0.035 Sum_probs=29.9
Q ss_pred CCCCCCCC-c-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 2 DDMFQNVP-K-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 2 gd~~~~~p-~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
+|+.+..+ . .|+|++.. +++ ...+++++++.|+|||.+++.
T Consensus 122 ~d~~~~~~~~~~D~i~~~~-~~~-----~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 122 SRVEEFPSEPPFDGVISRA-FAS-----LNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CCTTTSCCCSCEEEEECSC-SSS-----HHHHHHHHTTSEEEEEEEEEE
T ss_pred cchhhCCccCCcCEEEEec-cCC-----HHHHHHHHHHhcCCCcEEEEE
Confidence 56666333 2 49998643 222 468999999999999999986
No 184
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=93.89 E-value=0.094 Score=35.69 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=32.2
Q ss_pred CCCCCCCC--cccEEEeccccccCCh----HH-HHHHHHHHHhhCCCCC--EEEEEeee
Q 048196 2 DDMFQNVP--KGDAIFMKWILHNWSD----DH-CLKLLKIYYKSIPEDG--KVIVVESI 51 (115)
Q Consensus 2 gd~~~~~p--~~D~v~~~~vlh~~~d----~~-~~~iL~~~~~aL~pgg--~lii~d~~ 51 (115)
||+.+ +| ..|+|++... |..++ +. ..++|+.+.+.|+||| .+++..+.
T Consensus 131 ~D~~~-l~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 131 VDIHT-LPVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCTTT-SCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred cCHhH-CCCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 57666 33 3599998766 43322 11 2358899999999999 88885543
No 185
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.76 E-value=0.089 Score=34.57 Aligned_cols=43 Identities=21% Similarity=0.148 Sum_probs=31.3
Q ss_pred CCCCCCC-Cc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 2 DDMFQNV-PK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 2 gd~~~~~-p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
+|+.+.. +. .|+|++ +.++ ...+++++.+.|+|||++++....
T Consensus 147 ~d~~~~~~~~~~~D~v~~-----~~~~--~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 147 VDFKDAEVPEGIFHAAFV-----DVRE--PWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp SCTTTSCCCTTCBSEEEE-----CSSC--GGGGHHHHHHHBCTTCEEEEEESS
T ss_pred cChhhcccCCCcccEEEE-----CCcC--HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5666644 43 499986 2333 257899999999999999997643
No 186
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=93.76 E-value=0.038 Score=37.26 Aligned_cols=21 Identities=5% Similarity=0.142 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 048196 28 CLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~lii~ 48 (115)
...+++.+.+.|+|||+++++
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEE
Confidence 578999999999999999884
No 187
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.68 E-value=0.078 Score=34.43 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=29.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++.. +.+....+++++.+.|+|||.+++.+....
T Consensus 141 fD~v~~~~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 141 YDLIYIDA-----DKANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred ccEEEECC-----CHHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 49888543 234467899999999999999998776654
No 188
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.30 E-value=0.084 Score=34.40 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=18.6
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 048196 29 LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d 49 (115)
..+|+++++.|+|||.+++..
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 578999999999999998853
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=93.19 E-value=0.074 Score=36.78 Aligned_cols=48 Identities=13% Similarity=0.040 Sum_probs=28.3
Q ss_pred CCCCCCC--C-c-ccEEEeccccccCChHHH--HHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQNV--P-K-GDAIFMKWILHNWSDDHC--LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~~~--p-~-~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~lii~d 49 (115)
||.++.+ + . .|+|++...-+.-+.... .+++++++++|+|||.+++.-
T Consensus 145 ~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 145 DDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp SCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 5665533 2 2 499988544332222221 689999999999999998864
No 190
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=93.12 E-value=0.57 Score=31.34 Aligned_cols=78 Identities=5% Similarity=-0.040 Sum_probs=54.6
Q ss_pred CCCCCCCCc---ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNVPK---GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~p~---~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||.++.++. .|++++..+. -+....||....+.|+++|++++.- +
T Consensus 79 gD~l~~~~~~~~~D~IviaGmG----g~lI~~IL~~~~~~l~~~~~lIlqp-~--------------------------- 126 (230)
T 3lec_A 79 ANGLSAFEEADNIDTITICGMG----GRLIADILNNDIDKLQHVKTLVLQP-N--------------------------- 126 (230)
T ss_dssp CSGGGGCCGGGCCCEEEEEEEC----HHHHHHHHHHTGGGGTTCCEEEEEE-S---------------------------
T ss_pred CchhhccccccccCEEEEeCCc----hHHHHHHHHHHHHHhCcCCEEEEEC-C---------------------------
Confidence 677875542 5998876543 4557889999999999999887622 0
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc---CCceEEEEEE
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF---TCNLWVRDFY 114 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~---~~~~~lie~~ 114 (115)
....++++||.+.||.+.+..-+ +-.+.++.+.
T Consensus 127 ---~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 127 ---NREDDLRKWLAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp ---SCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred ---CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 01468899999999999876543 2456666654
No 191
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.10 E-value=0.031 Score=37.69 Aligned_cols=42 Identities=14% Similarity=0.270 Sum_probs=30.4
Q ss_pred CCCCC-CCCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
||+.+ +++. .|+|++ +.++. .++++++.+.|+|||++++...
T Consensus 160 ~d~~~~~~~~~~~D~v~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 160 SDLADSELPDGSVDRAVL-----DMLAP--WEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp SCGGGCCCCTTCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEES
T ss_pred CchHhcCCCCCceeEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeC
Confidence 56655 3443 499987 23332 3789999999999999999764
No 192
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=93.03 E-value=0.029 Score=36.85 Aligned_cols=37 Identities=11% Similarity=0.268 Sum_probs=29.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
.|+|++....+ ...++++++.+.|+|||++++.+...
T Consensus 127 fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 127 FDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp EEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred ccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 49999876654 35789999999999999999876543
No 193
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.99 E-value=0.2 Score=34.95 Aligned_cols=87 Identities=10% Similarity=-0.072 Sum_probs=52.2
Q ss_pred cEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCch-hhhhc-hhc-cch--hcccCCCcee-CC-H
Q 048196 12 DAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETST-VSKRN-SQL-DVL--MMTQNPSGKK-RT-K 84 (115)
Q Consensus 12 D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~-~~~~~-~~~-~l~--~~~~~~~g~~-rt-~ 84 (115)
=++++--++|++++++..++++.+.+.+.||+.|++ |.+.++.+.... ..... ..+ ... .-+....... ++ .
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~-d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 259 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV-ETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENR 259 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE-ECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE-EecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCCh
Confidence 466777899999999999999999999889887755 655443311100 00000 000 000 0000001122 26 7
Q ss_pred HHHHHHHHhCCCCee
Q 048196 85 HEFLTLATGAGFSGT 99 (115)
Q Consensus 85 ~e~~~ll~~aGf~~~ 99 (115)
++..++|.++||+.+
T Consensus 260 ~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 260 AVVADWLNRHGWRAT 274 (310)
T ss_dssp CCHHHHHTTTTEEEE
T ss_pred HHHHHHHHHCcCccc
Confidence 899999999999887
No 194
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=92.89 E-value=0.1 Score=35.73 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=31.2
Q ss_pred CCCCCCCC--cccEEEeccccccCCh----HH-HHHHHHHHHhhCCCCC--EEEEEee
Q 048196 2 DDMFQNVP--KGDAIFMKWILHNWSD----DH-CLKLLKIYYKSIPEDG--KVIVVES 50 (115)
Q Consensus 2 gd~~~~~p--~~D~v~~~~vlh~~~d----~~-~~~iL~~~~~aL~pgg--~lii~d~ 50 (115)
||+.+ +| ..|+|++... +..+. .. ..++|+.+.+.|+||| .+++..+
T Consensus 139 ~D~~~-l~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 139 VDVTK-MEPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCGGG-CCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CcHhh-CCCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 56655 33 3599998766 43322 11 2358899999999999 8887443
No 195
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=92.75 E-value=0.053 Score=34.92 Aligned_cols=23 Identities=13% Similarity=0.319 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhCCCCCEEEEEee
Q 048196 28 CLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
+..+|+.+.+.|+|||++++.-+
T Consensus 118 ~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 118 GQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHccCCCEEEEEEc
Confidence 46788999999999999987544
No 196
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=92.71 E-value=0.14 Score=37.31 Aligned_cols=53 Identities=9% Similarity=0.157 Sum_probs=37.1
Q ss_pred CCCCC-C--CC-c-ccEEEe------ccccccCChHH--------------HHHHHHHHHhhCCCCCEEEEEeeecCC
Q 048196 2 DDMFQ-N--VP-K-GDAIFM------KWILHNWSDDH--------------CLKLLKIYYKSIPEDGKVIVVESILPE 54 (115)
Q Consensus 2 gd~~~-~--~p-~-~D~v~~------~~vlh~~~d~~--------------~~~iL~~~~~aL~pgg~lii~d~~~~~ 54 (115)
+|+.+ + ++ . .|+|++ ..+++..+|.. ..++|+++.+.|+|||++++.++....
T Consensus 317 ~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 317 KDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp SCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred cChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 56555 2 44 3 499996 34666555431 168999999999999999998875543
No 197
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=92.43 E-value=0.097 Score=32.19 Aligned_cols=38 Identities=11% Similarity=-0.045 Sum_probs=26.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHH--hhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYY--KSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~--~aL~pgg~lii~d~~~ 52 (115)
.|+|++...+| -..+ ++++.+. +.|+|||.+++.....
T Consensus 111 ~D~i~~~~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 111 FTVAFMAPPYA-MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEEEEECCCTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred eEEEEECCCCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 59999988877 2222 3444444 8999999998865443
No 198
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=92.35 E-value=0.021 Score=37.73 Aligned_cols=38 Identities=24% Similarity=0.341 Sum_probs=27.9
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++... .+....+++++.+.|+|||.+++-+....
T Consensus 143 fD~V~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~~~~~ 180 (232)
T 3ntv_A 143 YDMIFIDAA-----KAQSKKFFEIYTPLLKHQGLVITDNVLYH 180 (232)
T ss_dssp EEEEEEETT-----SSSHHHHHHHHGGGEEEEEEEEEECTTGG
T ss_pred ccEEEEcCc-----HHHHHHHHHHHHHhcCCCeEEEEeeCCcC
Confidence 499985532 23357899999999999999988554443
No 199
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=92.29 E-value=0.12 Score=34.38 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=27.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHh-hCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYK-SIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~-aL~pgg~lii~d~ 50 (115)
.|+|++... |. +..++|+++.+ .|+|||++++.|.
T Consensus 153 fD~I~~d~~-~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 153 HPLIFIDNA-HA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SSEEEEESS-CS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCEEEECCc-hH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 499887654 52 34679999996 9999999999765
No 200
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=91.91 E-value=0.022 Score=37.92 Aligned_cols=20 Identities=30% Similarity=0.361 Sum_probs=18.1
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 048196 29 LKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~ 48 (115)
..+++++.+.|+|||.+++.
T Consensus 153 ~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 153 NTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEE
Confidence 48999999999999999984
No 201
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=91.53 E-value=0.066 Score=34.52 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=28.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++.. +......+++++.+.|+|||.+++.+....
T Consensus 127 fD~v~~~~-----~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 127 IDILFMDC-----DVFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp EEEEEEET-----TTSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred CCEEEEcC-----ChhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 58887652 223457899999999999999988665443
No 202
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=91.52 E-value=0.14 Score=34.01 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=18.4
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 048196 29 LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d 49 (115)
..+|+++++.|+|||.+++.-
T Consensus 148 ~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 148 PTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCCEEEEEe
Confidence 379999999999999998853
No 203
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=91.43 E-value=0.087 Score=36.04 Aligned_cols=38 Identities=11% Similarity=0.101 Sum_probs=27.6
Q ss_pred ccEEEeccccccCChHHH--HHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILHNWSDDHC--LKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++....+..+.+.. .+++++++++|+|||.+++.
T Consensus 152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 499998544333222222 68999999999999999885
No 204
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=91.26 E-value=0.1 Score=33.86 Aligned_cols=31 Identities=16% Similarity=0.132 Sum_probs=25.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++...++++. +++.+.|+|||++++..
T Consensus 152 fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 152 YDAIHVGAAAPVVP--------QALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred cCEEEECCchHHHH--------HHHHHhcCCCcEEEEEE
Confidence 49999999887765 46788999999999964
No 205
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=91.01 E-value=0.34 Score=33.10 Aligned_cols=45 Identities=11% Similarity=0.195 Sum_probs=30.8
Q ss_pred CCCCCCCC-cc---cEEEec------------cccccCChH------HHHHHHHHHH-hhCCCCCEEEE
Q 048196 2 DDMFQNVP-KG---DAIFMK------------WILHNWSDD------HCLKLLKIYY-KSIPEDGKVIV 47 (115)
Q Consensus 2 gd~~~~~p-~~---D~v~~~------------~vlh~~~d~------~~~~iL~~~~-~aL~pgg~lii 47 (115)
||++++++ .. |+|++. .+. +.+.. +...+++++. +.|+|||.+++
T Consensus 180 ~D~~~~~~~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 180 GEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp SSTTGGGGGGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred CcchhhcccccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 56776543 45 999885 333 23321 1237899999 99999999987
No 206
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=90.79 E-value=0.088 Score=34.25 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=28.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++... ......+++++.+.|+|||.+++.+....
T Consensus 146 ~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 183 (229)
T 2avd_A 146 FDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLWR 183 (229)
T ss_dssp EEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSGG
T ss_pred ccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCcC
Confidence 498887432 33457899999999999999998775543
No 207
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=90.75 E-value=0.27 Score=30.61 Aligned_cols=39 Identities=5% Similarity=-0.036 Sum_probs=27.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHH--HhhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIY--YKSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~lii~d~~~ 52 (115)
.|+|++...+|....+ ..++.+ .+.|+|||.+++.....
T Consensus 117 fD~i~~~~~~~~~~~~---~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 117 FDLVLLDPPYAKQEIV---SQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEEEECCCGGGCCHH---HHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCEEEECCCCCchhHH---HHHHHHHHhcccCCCCEEEEEeCCc
Confidence 4999998876644443 444555 77899999998865443
No 208
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=90.61 E-value=0.13 Score=33.19 Aligned_cols=39 Identities=10% Similarity=0.121 Sum_probs=29.0
Q ss_pred ccEEEeccccccCChHHHHHHHHHH--HhhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIY--YKSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~lii~d~~~ 52 (115)
.|+|++...+| ..+ ..++++.+ .+.|+|||.+++.....
T Consensus 126 fD~I~~~~~~~-~~~--~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 126 FDVVFLDPPFH-FNL--AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEEEECCCSS-SCH--HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCEEEECCCCC-Ccc--HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 69999887766 333 46788888 45699999998866543
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=90.58 E-value=0.12 Score=35.20 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=26.5
Q ss_pred ccEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHNWSDDH--CLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++....|..+... ..++++++++.|+|||.+++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 49998755443222222 2688999999999999998863
No 210
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=90.55 E-value=0.21 Score=36.11 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=31.7
Q ss_pred ccEEEe------ccccccCChH-------H-------HHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFM------KWILHNWSDD-------H-------CLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~------~~vlh~~~d~-------~-------~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++ ..+++..++. + ..++|+++.+.|+|||++++..+...
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 499986 2455555542 1 25899999999999999999886554
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=90.39 E-value=0.2 Score=33.45 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=28.3
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++... .......++++.+.|+|||.+++-+....
T Consensus 157 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 194 (247)
T 1sui_A 157 YDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLWN 194 (247)
T ss_dssp BSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTGG
T ss_pred EEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCcC
Confidence 499987533 23357899999999999999987654443
No 212
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=90.24 E-value=0.22 Score=34.58 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=21.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.++|+++.+.|+|||++++..+...
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 6899999999999999998775443
No 213
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=90.05 E-value=0.13 Score=32.03 Aligned_cols=40 Identities=10% Similarity=0.069 Sum_probs=27.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHH--hhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYY--KSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~--~aL~pgg~lii~d~~~~ 53 (115)
.|+|++...+|. ....++++.+. +.|+|||.+++......
T Consensus 101 fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 101 FDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp EEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 499998876643 22355666665 88999999988665433
No 214
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=90.02 E-value=0.43 Score=33.40 Aligned_cols=48 Identities=15% Similarity=0.063 Sum_probs=31.2
Q ss_pred CCCCC-CCC-c-ccEEEeccccccCCh--H----HHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQ-NVP-K-GDAIFMKWILHNWSD--D----HCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p-~-~D~v~~~~vlh~~~d--~----~~~~iL~~~~~aL~pgg~lii~d 49 (115)
+|+.+ +.+ . .|+|++.--++.... . ...++++++++.|+|||++++..
T Consensus 261 ~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 261 ADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 56666 333 2 399988544332111 1 13689999999999999999963
No 215
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=89.88 E-value=0.12 Score=33.96 Aligned_cols=38 Identities=5% Similarity=0.016 Sum_probs=25.7
Q ss_pred cEEEeccccccCChHHH------HHHHHHHHhhCCCCCEEEEEe
Q 048196 12 DAIFMKWILHNWSDDHC------LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 12 D~v~~~~vlh~~~d~~~------~~iL~~~~~aL~pgg~lii~d 49 (115)
|.|++............ ..+++.+++.|+|||.+++..
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 88887644332222111 259999999999999998854
No 216
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=89.67 E-value=0.18 Score=32.72 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=26.4
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++...+|++. +++.+.|+|||++++.-.
T Consensus 163 fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 163 FDAIHVGASASELP--------EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp EEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEE
T ss_pred cCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEc
Confidence 49999999998754 677889999999998643
No 217
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=89.57 E-value=0.14 Score=33.68 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=29.1
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.|+|++... .+....+++++.+.|+|||.+++.+....
T Consensus 149 fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 149 FDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred cCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 498886543 34467899999999999999988765544
No 218
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=89.40 E-value=0.17 Score=35.31 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=23.5
Q ss_pred ccEEEeccccccCChHHH---HHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHNWSDDHC---LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~---~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++... +.+..... .++++++++.|+|||.+++..
T Consensus 182 fD~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 182 FDVIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 499997543 33332221 689999999999999998853
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=89.12 E-value=0.18 Score=35.00 Aligned_cols=39 Identities=5% Similarity=0.031 Sum_probs=28.9
Q ss_pred ccEEEecccccc---CChHH--HHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHN---WSDDH--CLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~---~~d~~--~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++....|. -+.+. ..+++++++++|+|||.+++.-
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 499998766554 11111 3689999999999999999864
No 220
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=88.99 E-value=0.2 Score=35.16 Aligned_cols=40 Identities=8% Similarity=0.124 Sum_probs=28.6
Q ss_pred ccEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHNWSDDH--CLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++....|...... ..++++++++.|+|||.+++.-.
T Consensus 160 fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 160 RDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp EEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 49999865444322221 26899999999999999988654
No 221
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=88.77 E-value=0.19 Score=33.27 Aligned_cols=37 Identities=16% Similarity=0.115 Sum_probs=27.6
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
.|+|++.. +......+++++.+.|+|||.+++-+...
T Consensus 148 fD~I~~d~-----~~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 148 YDFGFVDA-----DKPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred cCEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 49888642 23446789999999999999987755443
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=88.62 E-value=0.49 Score=34.94 Aligned_cols=25 Identities=12% Similarity=0.303 Sum_probs=21.0
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
.++|+++.+.|+|||+|++..+...
T Consensus 226 ~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 226 RELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred HHHHHHHHHhcCCCCEEEEecccCC
Confidence 5789999999999999998776443
No 223
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=88.29 E-value=0.28 Score=34.05 Aligned_cols=42 Identities=17% Similarity=0.244 Sum_probs=27.8
Q ss_pred CCCCCC---CCc--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQN---VPK--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~~---~p~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
||+.+. ++. .|+|++.. ++. ..+++++.+.|+|||++++...
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~-----~~~--~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDM-----LNP--HVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp SCTTCCC-------EEEEEECS-----SST--TTTHHHHGGGEEEEEEEEEEES
T ss_pred CChHHcccccCCCCeeEEEECC-----CCH--HHHHHHHHHhcCCCcEEEEEeC
Confidence 455552 343 49998732 221 2388999999999999998765
No 224
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=88.09 E-value=0.18 Score=34.48 Aligned_cols=44 Identities=18% Similarity=0.182 Sum_probs=29.7
Q ss_pred CCCCC-CCCcccEEEeccccccCChHHHHHHHHH--------------H--HhhCCCCCEEE
Q 048196 2 DDMFQ-NVPKGDAIFMKWILHNWSDDHCLKLLKI--------------Y--YKSIPEDGKVI 46 (115)
Q Consensus 2 gd~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~~--------------~--~~aL~pgg~li 46 (115)
||+.+ ++|..|+++. +...+|+.+....+|.. + +.+|+|||+++
T Consensus 84 ~D~~~~~~~~fD~vv~-nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 84 GDVLKTDLPFFDTCVA-NLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCTTTSCCCCCSEEEE-ECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cceecccchhhcEEEE-ecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 67777 6666798887 55556776666666642 2 35899999753
No 225
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=88.05 E-value=0.23 Score=32.59 Aligned_cols=37 Identities=11% Similarity=0.193 Sum_probs=27.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
.|+|++.... ......++++.+.|+|||.+++.+...
T Consensus 130 fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 130 YQLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp EEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred cCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 4999875432 234678999999999999998855544
No 226
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=87.80 E-value=0.0047 Score=40.83 Aligned_cols=77 Identities=12% Similarity=0.019 Sum_probs=46.3
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|++...+|+.++.. ..+.++++.|+|||.+++.... ...+. .... --+....+++..+
T Consensus 145 ~D~v~~~~~~~~~~~~~--~~~~~~~~~L~pgG~~i~~~~~-~~~~~------------~~~~----lp~~~~~~~~~~~ 205 (241)
T 3gdh_A 145 ADVVFLSPPWGGPDYAT--AETFDIRTMMSPDGFEIFRLSK-KITNN------------IVYF----LPRNADIDQVASL 205 (241)
T ss_dssp CSEEEECCCCSSGGGGG--SSSBCTTTSCSSCHHHHHHHHH-HHCSC------------EEEE----EETTBCHHHHHHT
T ss_pred CCEEEECCCcCCcchhh--hHHHHHHhhcCCcceeHHHHHH-hhCCc------------eEEE----CCCCCCHHHHHHH
Confidence 49999999999877653 3677888999999995542211 10000 0000 0112346788888
Q ss_pred HHhCCCCeeEEEEcCC
Q 048196 91 ATGAGFSGTRFEWFTC 106 (115)
Q Consensus 91 l~~aGf~~~~~~~~~~ 106 (115)
+...|...++.....+
T Consensus 206 l~~~g~~~i~~~~~~~ 221 (241)
T 3gdh_A 206 AGPGGQVEIEQNFLNN 221 (241)
T ss_dssp TCTTCCEEEEEEEETT
T ss_pred hccCCCEEEEehhhcC
Confidence 8877755554444443
No 227
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=87.75 E-value=0.78 Score=31.49 Aligned_cols=69 Identities=10% Similarity=0.127 Sum_probs=44.4
Q ss_pred CCCCCCCC--cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCc
Q 048196 2 DDMFQNVP--KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSG 79 (115)
Q Consensus 2 gd~~~~~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 79 (115)
||.++-.+ .+|.|++..-. .+.+.|..+.+.|+|||.|.+.+++..+...
T Consensus 182 ~D~~~~~~~~~~D~Vi~~~p~------~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~---------------------- 233 (278)
T 3k6r_A 182 MDNRDFPGENIADRILMGYVV------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMP---------------------- 233 (278)
T ss_dssp SCTTTCCCCSCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT----------------------
T ss_pred CcHHHhccccCCCEEEECCCC------cHHHHHHHHHHHcCCCCEEEEEeeecccccc----------------------
Confidence 56666333 35988765321 1346788888899999999888776443211
Q ss_pred eeCCHHHHHHHHHhCCCCee
Q 048196 80 KKRTKHEFLTLATGAGFSGT 99 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~~~ 99 (115)
....+.++++.++.|++..
T Consensus 234 -~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 234 -REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp -TTTHHHHHHHHHHTTCEEE
T ss_pred -hhHHHHHHHHHHHcCCcEE
Confidence 0224567778888998753
No 228
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=87.10 E-value=0.41 Score=35.31 Aligned_cols=24 Identities=13% Similarity=0.135 Sum_probs=20.7
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeec
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
.++|+++.+.|+|||+|+...+..
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhcCCCcEEEEEeccC
Confidence 789999999999999999876544
No 229
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=86.96 E-value=0.26 Score=34.15 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=25.2
Q ss_pred ccEEEeccccccCChH--HHHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWILHNWSDD--HCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~--~~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++....+..+.. ...++++++++.|+|||.+++..
T Consensus 169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 4999985443322211 23578999999999999998865
No 230
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=86.86 E-value=0.62 Score=31.44 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 28 CLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
..++|+++.+.|+|||++++......
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 37899999999999999998776544
No 231
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=86.86 E-value=0.24 Score=33.57 Aligned_cols=47 Identities=15% Similarity=0.263 Sum_probs=33.5
Q ss_pred CCCCCC-CC-cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC
Q 048196 2 DDMFQN-VP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPE 54 (115)
Q Consensus 2 gd~~~~-~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~ 54 (115)
||..+. .+ ..|+|++.... ...++++++.+.|+|||.+++.+....+
T Consensus 176 ~d~~~~~~~~~~D~Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 176 ADNRDVELKDVADRVIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp SCGGGCCCTTCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred CChHHcCccCCceEEEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCccc
Confidence 455553 22 24999876543 3467899999999999999998876543
No 232
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=86.48 E-value=0.39 Score=32.51 Aligned_cols=20 Identities=20% Similarity=0.069 Sum_probs=14.2
Q ss_pred HHHHHHHhCCCCeeEEEEcC
Q 048196 86 EFLTLATGAGFSGTRFEWFT 105 (115)
Q Consensus 86 e~~~ll~~aGf~~~~~~~~~ 105 (115)
.+++.|.+|||++.++...+
T Consensus 217 ~vrr~L~~aGF~v~~~~g~~ 236 (257)
T 2qy6_A 217 FVRRGLQEAGFTMQKRKGFG 236 (257)
T ss_dssp HHHHHHHHHTEEEEEECCST
T ss_pred HHHHHHHHCCCEEEeCCCCC
Confidence 56778888999877654443
No 233
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=86.38 E-value=0.8 Score=32.53 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=17.4
Q ss_pred HHHHHHHhhCCCCCEEEEEe
Q 048196 30 KLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 30 ~iL~~~~~aL~pgg~lii~d 49 (115)
.+++++.+.|+|||+++++-
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEE
Confidence 66899999999999998854
No 234
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=86.27 E-value=0.28 Score=34.53 Aligned_cols=38 Identities=11% Similarity=-0.006 Sum_probs=26.6
Q ss_pred ccEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILHNWSDDH--CLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++...-+..+.+. ..+++++++++|+|||.+++.
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 49999754321111111 478999999999999999885
No 235
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=86.08 E-value=0.47 Score=30.45 Aligned_cols=39 Identities=5% Similarity=0.124 Sum_probs=27.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhh--CCCCCEEEEEeeec
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKS--IPEDGKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~a--L~pgg~lii~d~~~ 52 (115)
.|+|++...+| ..+ ..++++.+.+. |+|||.+++.....
T Consensus 123 fD~V~~~~p~~-~~~--~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 123 HNIVFVDPPFR-RGL--LEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp EEEEEECCSSS-TTT--HHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCEEEECCCCC-CCc--HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 49999887766 332 35677777664 99999998766543
No 236
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=86.07 E-value=0.34 Score=33.75 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=26.4
Q ss_pred ccEEEeccccccCCh-HH--HHHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILHNWSD-DH--CLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d-~~--~~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++... +.+.. +. ..++++++++.|+|||.+++.
T Consensus 190 fDvIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 190 YDVIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEEEEEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 499997542 22221 11 168999999999999999885
No 237
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=85.86 E-value=0.68 Score=29.34 Aligned_cols=37 Identities=8% Similarity=0.048 Sum_probs=23.3
Q ss_pred CCCCCCCCc-ccEEEeccccccCChHHHHHHHHHHHhhC
Q 048196 2 DDMFQNVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSI 39 (115)
Q Consensus 2 gd~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL 39 (115)
||+.+ +|. .|+|++...+|++++....++++++.+.+
T Consensus 102 ~d~~~-~~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 102 ADVSE-ISGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCGGG-CCCCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred CcHHH-CCCCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 45555 343 59999999999998765678899999887
No 238
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=85.31 E-value=0.21 Score=34.02 Aligned_cols=38 Identities=16% Similarity=0.042 Sum_probs=26.8
Q ss_pred ccEEEeccccccCChHH--HHHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILHNWSDDH--CLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++....+..+.+. ..+++++++++|+|||.+++.
T Consensus 149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 49999854433322111 257999999999999999885
No 239
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=85.25 E-value=0.28 Score=33.77 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=24.2
Q ss_pred ccEEEeccccccCChH---HHHHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILHNWSDD---HCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~---~~~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++...-+..... ...++++++++.|+|||.+++.
T Consensus 164 fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 164 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 4999864221101111 1268999999999999999885
No 240
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=85.00 E-value=0.39 Score=34.88 Aligned_cols=49 Identities=16% Similarity=0.186 Sum_probs=33.6
Q ss_pred CCCCC-CCC-cccEEEeccccccCChH---------------HHHHHHHHHHhhCCCCCEEEEEee
Q 048196 2 DDMFQ-NVP-KGDAIFMKWILHNWSDD---------------HCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 2 gd~~~-~~p-~~D~v~~~~vlh~~~d~---------------~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
||.+. +.. ..|+|+..--++..... .....++++.+.|+|||++.++-+
T Consensus 243 gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 243 EDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 67777 333 35999987555543211 124789999999999999988653
No 241
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=84.63 E-value=0.38 Score=32.19 Aligned_cols=61 Identities=5% Similarity=-0.097 Sum_probs=41.8
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHH
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTL 90 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~l 90 (115)
.|+|+++.+- + ...+++.+.+.|+|||++++.... . .. . ...++.+.
T Consensus 152 fD~I~s~a~~----~--~~~ll~~~~~~LkpgG~l~~~~g~---~-~~---~--------------------e~~~~~~~ 198 (249)
T 3g89_A 152 YARAVARAVA----P--LCVLSELLLPFLEVGGAAVAMKGP---R-VE---E--------------------ELAPLPPA 198 (249)
T ss_dssp EEEEEEESSC----C--HHHHHHHHGGGEEEEEEEEEEECS---C-CH---H--------------------HHTTHHHH
T ss_pred ceEEEECCcC----C--HHHHHHHHHHHcCCCeEEEEEeCC---C-cH---H--------------------HHHHHHHH
Confidence 4999986542 2 358899999999999999885421 1 00 0 01356667
Q ss_pred HHhCCCCeeEEEEc
Q 048196 91 ATGAGFSGTRFEWF 104 (115)
Q Consensus 91 l~~aGf~~~~~~~~ 104 (115)
++..||+..++.++
T Consensus 199 l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 199 LERLGGRLGEVLAL 212 (249)
T ss_dssp HHHHTEEEEEEEEE
T ss_pred HHHcCCeEEEEEEe
Confidence 77889998887665
No 242
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=83.51 E-value=0.65 Score=33.31 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=31.2
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChH-HHHHHHHHHHhhCCCCCEEEE
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDD-HCLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~lii 47 (115)
||+.+ .+|+ .|+++.-++-+.+..+ ....++....+-|+|||+++-
T Consensus 139 ~~~~~~~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 139 GPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp SCTTTCCCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eeeeeecCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 56666 6775 6999875443333333 356778877889999998764
No 243
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=82.81 E-value=0.78 Score=28.27 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=17.8
Q ss_pred HHHHHHHHhhCCCCCEEEE
Q 048196 29 LKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii 47 (115)
+.+++.+.++|+|||++.-
T Consensus 78 r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHHhCCCCEEEe
Confidence 7999999999999999976
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=81.97 E-value=0.6 Score=31.59 Aligned_cols=31 Identities=29% Similarity=0.272 Sum_probs=24.2
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++. .+|+. ..+++++++|+|||.+++.
T Consensus 140 fD~Ii~d-----~~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 140 YDLIFCL-----QEPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEEEES-----SCCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEEC-----CCChH--HHHHHHHHhcCCCcEEEEE
Confidence 4888864 34432 4899999999999999885
No 245
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=81.12 E-value=2.7 Score=29.34 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 27 HCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 27 ~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
...++++++.+.|+|||.+++....
T Consensus 250 ~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 250 HLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHhcCcCcEEEEEECC
Confidence 4578999999999999998775543
No 246
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=79.60 E-value=3.8 Score=24.41 Aligned_cols=28 Identities=14% Similarity=0.081 Sum_probs=23.8
Q ss_pred CChHHHHHHHHHHHhhCCCC--CEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPED--GKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~pg--g~lii~d~ 50 (115)
.+|+...+++..+.+++..| |++++.+.
T Consensus 81 v~de~ve~vv~~I~~~~~tg~~GkIFV~~V 110 (119)
T 2cz4_A 81 VSEEVALRILQRLQEEYFPHYAVIAYVENV 110 (119)
T ss_dssp ECHHHHHHHHHHHHHHTTTTSCCEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHhcCCCCEEEEEEEe
Confidence 37888999999999888887 99999875
No 247
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=78.52 E-value=0.38 Score=36.12 Aligned_cols=44 Identities=14% Similarity=0.149 Sum_probs=35.7
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCC
Q 048196 11 GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPE 54 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~ 54 (115)
.|+|++..++||.+|++...-+.++...|+++++.++...+..+
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 49999999999999987666666788889999888887765443
No 248
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=77.37 E-value=2 Score=30.52 Aligned_cols=41 Identities=5% Similarity=-0.016 Sum_probs=28.5
Q ss_pred ccEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 11 GDAIFMKWILHNWSD-------DHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
.|+|++.--....+. ....++++++.+.|+|||.+++....
T Consensus 290 fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 290 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 499887432211111 44678999999999999999887643
No 249
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=77.12 E-value=1.1 Score=30.93 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 048196 26 DHCLKLLKIYYKSIPEDGKVIVVESILPEL 55 (115)
Q Consensus 26 ~~~~~iL~~~~~aL~pgg~lii~d~~~~~~ 55 (115)
++..+.|..+.+.|+|||+|+|+-+..-++
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLED 239 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLED 239 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHHH
Confidence 346788899999999999999988865544
No 250
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=76.84 E-value=1.1 Score=31.89 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 048196 26 DHCLKLLKIYYKSIPEDGKVIVVESILPEL 55 (115)
Q Consensus 26 ~~~~~iL~~~~~aL~pgg~lii~d~~~~~~ 55 (115)
++..+.|..+.+.|+|||||+|+-+..-++
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHSLED 280 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHSLED 280 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCchhH
Confidence 346778899999999999999998764443
No 251
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=76.58 E-value=1.2 Score=34.15 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=31.8
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEE
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKV 45 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l 45 (115)
||+.+ .+|+ +|+++.-++=...--|-..++|....+-|+|||.+
T Consensus 418 gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 418 SDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp SCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred CcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 78888 7885 79998766544444444567777777789999875
No 252
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=75.65 E-value=1.5 Score=19.64 Aligned_cols=18 Identities=33% Similarity=0.669 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhCCCCCEE
Q 048196 28 CLKLLKIYYKSIPEDGKV 45 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~l 45 (115)
|+.+++++....+.+|++
T Consensus 4 cr~likriqa~ipk~grm 21 (34)
T 1ssz_A 4 CRALIKRIQAMIPKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCSSSCCC
T ss_pred HHHHHHHHHHHccccchh
Confidence 678889998888888875
No 253
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=75.56 E-value=6.2 Score=27.83 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=40.6
Q ss_pred CCCCC-CCCc--ccEEEeccccccCC------hHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchh
Q 048196 2 DDMFQ-NVPK--GDAIFMKWILHNWS------DDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLM 72 (115)
Q Consensus 2 gd~~~-~~p~--~D~v~~~~vlh~~~------d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~ 72 (115)
||+.+ +.+. .|+|++.-.++... .+--.++++.+++.| ||+++++-.
T Consensus 275 ~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------- 330 (373)
T 3tm4_A 275 GDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------- 330 (373)
T ss_dssp CCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES----------------------
T ss_pred CChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC----------------------
Confidence 56666 4442 49988865443221 111367778888877 555554321
Q ss_pred cccCCCceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 73 MTQNPSGKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 73 ~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
+.+.+.+.+++.||+..+...+
T Consensus 331 ----------~~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 331 ----------EKKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp ----------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred ----------CHHHHHHHHHHcCCEEEEEEEE
Confidence 2356667788889888776655
No 254
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=75.16 E-value=1.7 Score=30.27 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=30.9
Q ss_pred CCCCCCCCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 2 DDMFQNVPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 2 gd~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
||.++.....|+|++.- | ....++++.+.+.|+|||.+++.++...
T Consensus 250 ~D~~~~~~~fD~Vi~dp-----P-~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 250 SDVREVDVKGNRVIMNL-----P-KFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp SCGGGCCCCEEEEEECC-----T-TTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CChHHhcCCCcEEEECC-----c-HhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 45555233358888742 1 1123889999999999999999876544
No 255
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=75.09 E-value=2.6 Score=29.83 Aligned_cols=40 Identities=10% Similarity=-0.041 Sum_probs=27.5
Q ss_pred ccEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWILHNWSD-------DHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.|+|++---....+. ....++++++.+.|+|||.+++...
T Consensus 280 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 280 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred eeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 498887322211111 3457899999999999999988654
No 256
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=74.00 E-value=4.6 Score=27.80 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=28.7
Q ss_pred ccEEEeccccc---cCChH-HHHHHHHHHHhhCCCC-CEEEEEeeec
Q 048196 11 GDAIFMKWILH---NWSDD-HCLKLLKIYYKSIPED-GKVIVVESIL 52 (115)
Q Consensus 11 ~D~v~~~~vlh---~~~d~-~~~~iL~~~~~aL~pg-g~lii~d~~~ 52 (115)
.|+|+.-...| .+-|+ ....+|+-+.+.|+|| |.+++ ....
T Consensus 141 ~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~ 186 (277)
T 3evf_A 141 CDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLA 186 (277)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESC
T ss_pred ccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecC
Confidence 59999876555 23333 2346789999999999 99888 4433
No 257
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=67.76 E-value=7.9 Score=25.98 Aligned_cols=78 Identities=9% Similarity=-0.035 Sum_probs=51.9
Q ss_pred CCCCCCCC-c--ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCC
Q 048196 2 DDMFQNVP-K--GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPS 78 (115)
Q Consensus 2 gd~~~~~p-~--~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (115)
||.++.++ . .|+|++..+ .-+-...||....+.|++++++++.- .
T Consensus 79 gD~l~~~~~~~~~D~Iviagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~-~--------------------------- 126 (244)
T 3gnl_A 79 GNGLAVIEKKDAIDTIVIAGM----GGTLIRTILEEGAAKLAGVTKLILQP-N--------------------------- 126 (244)
T ss_dssp CSGGGGCCGGGCCCEEEEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEE-S---------------------------
T ss_pred cchhhccCccccccEEEEeCC----chHHHHHHHHHHHHHhCCCCEEEEEc-C---------------------------
Confidence 67777544 2 599887543 44557889999999999998887732 0
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc---CCceEEEEEE
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF---TCNLWVRDFY 114 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~---~~~~~lie~~ 114 (115)
....++++||.+.||.+.+..-+ .-.+.++.+.
T Consensus 127 ---~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 127 ---IAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp ---SCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEE
T ss_pred ---CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 01367788888889888654432 2345555543
No 258
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=67.44 E-value=1.9 Score=29.78 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 048196 26 DHCLKLLKIYYKSIPEDGKVIVVESILPEL 55 (115)
Q Consensus 26 ~~~~~iL~~~~~aL~pgg~lii~d~~~~~~ 55 (115)
++..+.|..+.+.|+|||++.|+-+..-++
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfhsled 251 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFHSLED 251 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecCcHHH
Confidence 346788888999999999999988654433
No 259
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=66.51 E-value=4.3 Score=29.11 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=27.1
Q ss_pred ccEEEeccccccCCh-------HHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 11 GDAIFMKWILHNWSD-------DHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 11 ~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
.|+|++.--....+. ..-.++++++.+.|+|||.+++..+.
T Consensus 281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 488887432211111 22458899999999999999876643
No 260
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=63.38 E-value=9.8 Score=23.81 Aligned_cols=37 Identities=11% Similarity=0.042 Sum_probs=27.7
Q ss_pred CCCCCCCC-cccEEEeccccccCChHHHHHHHHHHHhhC
Q 048196 2 DDMFQNVP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSI 39 (115)
Q Consensus 2 gd~~~~~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL 39 (115)
||+.+ +| ..|+|++.-.+|.+......++++++.+.+
T Consensus 104 ~d~~~-~~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 104 GDVSE-FNSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp SCGGG-CCCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred CchHH-cCCCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 45544 34 359999998888887655678889988887
No 261
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=61.42 E-value=16 Score=23.39 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=26.0
Q ss_pred CCc-eeCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEE
Q 048196 77 PSG-KKRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDF 113 (115)
Q Consensus 77 ~~g-~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~ 113 (115)
.+| +.-.=+|++++|+++||+.++.+ ++++.-|++.
T Consensus 16 VGG~nkv~MadLr~~l~~lGf~~V~Ty-I~SGNvvF~s 52 (183)
T 2hiy_A 16 VGGKNKVVMAELRQELTNLGLEKVESY-INSGNIFFTS 52 (183)
T ss_dssp CC-CCCCCHHHHHHHHHHHTCEEEEEE-TTTTEEEEEE
T ss_pred cCCCCcccHHHHHHHHHHcCCccceEE-EecCCEEEec
Confidence 345 34568999999999999998866 5565555553
No 262
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=61.35 E-value=3.9 Score=30.02 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=20.4
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeec
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESIL 52 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~ 52 (115)
.++|+++.+.|+|||+|+...+..
T Consensus 214 ~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 214 QEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhcCCCcEEEEEEeec
Confidence 388999999999999999876544
No 263
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=60.82 E-value=9.4 Score=20.12 Aligned_cols=19 Identities=16% Similarity=0.094 Sum_probs=16.2
Q ss_pred CCHHHHHHHHHhCCCCeeE
Q 048196 82 RTKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~ 100 (115)
.+..|+.++|+++||..++
T Consensus 5 ~~~~elik~L~~~G~~~~r 23 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERM 23 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHCCCEEeC
Confidence 4678999999999998765
No 264
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=60.48 E-value=4.2 Score=28.88 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=21.8
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCC
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESILPEL 55 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~~~~ 55 (115)
.+||.++.+.|+|||+|+-.-+-+...
T Consensus 264 ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 264 VQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred HHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 578999999999999998877655443
No 265
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=59.13 E-value=7.1 Score=27.68 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=26.7
Q ss_pred ccEEEecccc--------ccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWIL--------HNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vl--------h~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++.--. ++.. ....+++.++.+.|+|||.+++..
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGAC-RGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCC-THHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEECCCCCCCChhHHHHHH-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4888875221 1111 346789999999999999998854
No 266
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=58.80 E-value=2.8 Score=27.56 Aligned_cols=48 Identities=15% Similarity=0.180 Sum_probs=29.7
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHH--------------HHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLL--------------KIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL--------------~~~~~aL~pgg~lii~d 49 (115)
||+.+ +++. ....++++.-.+.++.....++ +.+.+.|+|||++.+..
T Consensus 82 ~D~~~~~~~~~~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 82 QDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SCCTTTTCCCSSEEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CChhhcCcccCCCcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 67777 5553 3345556655555555444544 45778899999876643
No 267
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=58.73 E-value=4.4 Score=27.61 Aligned_cols=20 Identities=10% Similarity=0.429 Sum_probs=17.2
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 048196 29 LKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~ 48 (115)
..+++.+++.|+|||.+++.
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEE
Confidence 46788999999999999874
No 268
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=55.93 E-value=5.8 Score=31.07 Aligned_cols=37 Identities=11% Similarity=-0.054 Sum_probs=26.5
Q ss_pred cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEE
Q 048196 10 KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVI 46 (115)
Q Consensus 10 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~li 46 (115)
++|+++.-+.=.....|-..++|..+.+-|+|||.++
T Consensus 495 kVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 495 QPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 4799987776433334446678888888999998754
No 269
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=55.86 E-value=7.2 Score=23.26 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=25.7
Q ss_pred ccccccCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 17 KWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 17 ~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
..-+|-|..++..++++++.+. .+.|.++-+|
T Consensus 64 G~el~~WKp~eVdkm~~k~~q~-~~dGl~iYCD 95 (126)
T 2rbg_A 64 GYELFLWKKNEVDIFLKNLEKS-EVDGLLVYCD 95 (126)
T ss_dssp EEEEEEECGGGHHHHHHHHTTC-CCCEEEEEEC
T ss_pred ceEEEEeCHHHHHHHHHHHHHh-CCCceEEEeC
Confidence 3456779999999999999887 7888887655
No 270
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=55.81 E-value=20 Score=24.19 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=23.9
Q ss_pred cCChHHHHHHHHHHHhhC-------------CCCCEEEEEeeecCCC
Q 048196 22 NWSDDHCLKLLKIYYKSI-------------PEDGKVIVVESILPEL 55 (115)
Q Consensus 22 ~~~d~~~~~iL~~~~~aL-------------~pgg~lii~d~~~~~~ 55 (115)
++|.+...+.+++..-.+ .|||.-+|+|.+.+..
T Consensus 60 nmPkd~IerAIkk~~G~~~~~~~eei~YEgyGPgGvaiiVe~lTDN~ 106 (249)
T 1lfp_A 60 NMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNR 106 (249)
T ss_dssp TCCHHHHHHHHHHHHSCSSSCCCEEEEEEEEETTTEEEEEEEEESCH
T ss_pred CCCHHHHHHHHHHhcCCCcccceEEEEEEEECCCceEEEEEEecCCH
Confidence 566666777777765432 3889999999887753
No 271
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=53.04 E-value=33 Score=24.39 Aligned_cols=48 Identities=6% Similarity=-0.044 Sum_probs=31.3
Q ss_pred CCCCC-CCCc-ccEEEeccccc-cCC-hHHHHHHHHHHHhhCCC--CCEEEEEe
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILH-NWS-DDHCLKLLKIYYKSIPE--DGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh-~~~-d~~~~~iL~~~~~aL~p--gg~lii~d 49 (115)
+|+++ +.+. .|+|++.--.+ ... +++..++.+.+.+.|++ |++++|+-
T Consensus 290 ~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 290 MRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp CCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 56666 3443 49988763322 233 35577788888888776 99988864
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=52.21 E-value=4.8 Score=27.88 Aligned_cols=21 Identities=5% Similarity=0.083 Sum_probs=18.4
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 048196 29 LKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d 49 (115)
.+.++.++++|+|||.++..-
T Consensus 178 ~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 178 SAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEec
Confidence 578999999999999998854
No 273
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=51.67 E-value=7.7 Score=17.64 Aligned_cols=18 Identities=33% Similarity=0.669 Sum_probs=13.5
Q ss_pred HHHHHHHHHhhCCCCCEE
Q 048196 28 CLKLLKIYYKSIPEDGKV 45 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~l 45 (115)
|..+++++....+.||++
T Consensus 4 Crtlikriq~vIPk~~r~ 21 (34)
T 2dwf_A 4 CRALIKRIQAMIPKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHhhcCCcccc
Confidence 567888888888777553
No 274
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=50.75 E-value=6.7 Score=22.76 Aligned_cols=31 Identities=6% Similarity=0.181 Sum_probs=23.8
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEEEEcCCce
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRFEWFTCNL 108 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~ 108 (115)
-|...+.+++.+.|.+.|++.+.....+|-+
T Consensus 19 ~G~~i~~~~l~~~L~~~GY~r~~~v~~~Gef 49 (106)
T 3fpn_B 19 VGMEIERNALLRRLVDIQYDRNDIDFRRGTF 49 (106)
T ss_dssp TTCBCCHHHHHHHHHHTTCEECTTCCCTTEE
T ss_pred CCCCcCHHHHHHHHHHcCCEECCccCCcEEE
Confidence 6778899999999999999876544444433
No 275
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=50.73 E-value=29 Score=24.10 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=25.9
Q ss_pred ccEEEeccccccCC----hH-HHHHHHHHHHhhCCCC-CEEEEE
Q 048196 11 GDAIFMKWILHNWS----DD-HCLKLLKIYYKSIPED-GKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh~~~----d~-~~~~iL~~~~~aL~pg-g~lii~ 48 (115)
.|+|+.--..+ -+ |+ ....+|.-+.+.|+|| |.+++-
T Consensus 148 ~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 148 SDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred cCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 59888765554 11 22 2356788888999999 998884
No 276
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=49.79 E-value=14 Score=26.40 Aligned_cols=49 Identities=8% Similarity=-0.035 Sum_probs=29.8
Q ss_pred CCCCC-CCCc-ccEEEecccccc-CC-hHHHHHHHHHHHhhCCC--CCEEEEEee
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHN-WS-DDHCLKLLKIYYKSIPE--DGKVIVVES 50 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~-~~-d~~~~~iL~~~~~aL~p--gg~lii~d~ 50 (115)
+|+++ +.+. .|+|++.--.+. .. +++..++.+.+.+.|++ |++++|+-.
T Consensus 297 ~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 297 LQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp CCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 56666 3443 499988733221 22 24456677777766665 899888643
No 277
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=49.19 E-value=39 Score=19.98 Aligned_cols=47 Identities=19% Similarity=0.263 Sum_probs=30.8
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHHHHhCCCCeeEE
Q 048196 29 LKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 29 ~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 101 (115)
.+|+.++. +++.|.+++|.-++..... .+..+..+++++.||..+++
T Consensus 7 ~qivd~il-~~~egtri~iLAPvv~~rK-------------------------g~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 7 EQMVDRLL-SYPERTKMQILAPIVSGKK-------------------------GTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHHH-TSCTTCEEEEEEEEEEEEC-------------------------SCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-hCCCCCEEEEEEEEeeCCC-------------------------CcHHHHHHHHHhCCCeEEEE
Confidence 45666655 4788999999777655432 12356666777788877764
No 278
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=49.15 E-value=8.5 Score=19.91 Aligned_cols=19 Identities=21% Similarity=0.349 Sum_probs=15.6
Q ss_pred CHHHHHHHHHhCCCCeeEE
Q 048196 83 TKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 83 t~~e~~~ll~~aGf~~~~~ 101 (115)
-..+|+++|.++|....++
T Consensus 34 ~pp~W~~ll~~sGIt~~e~ 52 (59)
T 1cee_B 34 LDPDLRSLFSRAGISEAQL 52 (59)
T ss_dssp CCHHHHHHHTTTTSCSSCC
T ss_pred CCHHHHHHHHHcCCCHHHH
Confidence 4789999999999876544
No 279
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=48.59 E-value=3.4 Score=22.04 Aligned_cols=17 Identities=24% Similarity=0.260 Sum_probs=14.0
Q ss_pred HHHHHHHHHhCCCCeeE
Q 048196 84 KHEFLTLATGAGFSGTR 100 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~~ 100 (115)
++||+++|+.+|.+..+
T Consensus 24 p~eW~~ll~~sGIs~~~ 40 (65)
T 2lnh_A 24 DPELKNLFDMCGISEAQ 40 (65)
T ss_dssp CTTHHHHHHHHTCCHHH
T ss_pred CHHHHHHHHHcCCCHHH
Confidence 57999999999987543
No 280
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=48.34 E-value=26 Score=23.80 Aligned_cols=31 Identities=26% Similarity=0.184 Sum_probs=19.6
Q ss_pred CCCCC-CCCcccEEEeccccccCChHHHHHHHH
Q 048196 2 DDMFQ-NVPKGDAIFMKWILHNWSDDHCLKLLK 33 (115)
Q Consensus 2 gd~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~ 33 (115)
||+.+ +.+..|+|++ +...+++.+...++|+
T Consensus 97 ~D~~~~~~~~~D~Vv~-n~py~~~~~~~~~ll~ 128 (299)
T 2h1r_A 97 GDAIKTVFPKFDVCTA-NIPYKISSPLIFKLIS 128 (299)
T ss_dssp --CCSSCCCCCSEEEE-ECCGGGHHHHHHHHHH
T ss_pred CchhhCCcccCCEEEE-cCCcccccHHHHHHHh
Confidence 67776 4555698886 4555677776677773
No 281
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=47.74 E-value=8.4 Score=26.64 Aligned_cols=22 Identities=27% Similarity=0.413 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhhCCCCCEEEEE
Q 048196 27 HCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 27 ~~~~iL~~~~~aL~pgg~lii~ 48 (115)
....+|+.+++.|+|||.++|.
T Consensus 62 ~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 62 WFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCcCCcEEEEE
Confidence 3678889999999999999884
No 282
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=47.54 E-value=15 Score=27.42 Aligned_cols=48 Identities=13% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCCCC-CC---CcccEEEeccccccCCh------------HHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 2 DDMFQ-NV---PKGDAIFMKWILHNWSD------------DHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~---p~~D~v~~~~vlh~~~d------------~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
||.+. +. +..|+|+..--+..... ..-...++++.+.|+|||++.++-
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 56666 21 23599988643332211 112478999999999999998863
No 283
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=47.23 E-value=21 Score=20.72 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=21.3
Q ss_pred CChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
.+|++..++++.+.++++. +|++++.+.
T Consensus 65 v~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (116)
T 1vfj_A 65 VSEPFVKPTVEAILKAARTGEVGDGKIFVLPV 96 (116)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 3677788888888887765 588888763
No 284
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=47.14 E-value=21 Score=21.10 Aligned_cols=28 Identities=21% Similarity=0.273 Sum_probs=21.8
Q ss_pred CChHHHHHHHHHHHhhCC---CC-CEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIP---ED-GKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~---pg-g~lii~d~ 50 (115)
.+|++..++++.+.++.+ +| |++++.+.
T Consensus 65 V~de~ve~Vv~~I~~~a~TG~~GDGkIFV~~V 96 (118)
T 3t9z_A 65 VSDDAVDEVVEAIVSSARTGKFGDGRIFVIPV 96 (118)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EChHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 467778888888888876 43 99999774
No 285
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=46.97 E-value=21 Score=21.12 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE---D-GKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p---g-g~lii~d~ 50 (115)
.+|++..+++..+.++.+. | |++++.+.
T Consensus 65 V~de~ve~vv~~I~~~a~TG~~GDGkIFV~~V 96 (119)
T 3ncq_A 65 VKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPV 96 (119)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCCEEEEEEh
Confidence 4677788888888888765 3 99999774
No 286
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=46.36 E-value=10 Score=24.12 Aligned_cols=23 Identities=26% Similarity=0.419 Sum_probs=19.1
Q ss_pred CceeCCHHHHHHHHHhCCCCeeE
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~ 100 (115)
+....|++|+.++|++.||.+.+
T Consensus 31 ~~~I~tQeEL~~~L~~~Gi~vTQ 53 (170)
T 3lap_A 31 SAQVRSQNELAALLAAEGIEVTQ 53 (170)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCH
T ss_pred hCCCCCHHHHHHHHHHcCCCcCc
Confidence 55668999999999999998653
No 287
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=45.45 E-value=24 Score=20.71 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=21.4
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE---D-GKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p---g-g~lii~d~ 50 (115)
.+|++..+++..+.++.+. | |++++.+.
T Consensus 68 V~d~~ve~vv~~I~~~a~tg~~GDGkIFV~~v 99 (115)
T 3l7p_A 68 AHDAAVEEMITTISQAVKTGEVGDGKIFVSPV 99 (115)
T ss_dssp ECGGGHHHHHHHHHHHHCCC----CEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCcEEEEEEh
Confidence 4677788888888888875 3 99999763
No 288
>2ns1_B Nitrogen regulatory protein P-II 2; protein-protein complex, membrane protein, ammonia, channel, inhibitor, signal protein, ADP, BOG; HET: BOG ADP; 1.96A {Escherichia coli} SCOP: d.58.5.1 PDB: 1gnk_A 2nuu_G* 2gnk_A*
Probab=44.88 E-value=19 Score=21.02 Aligned_cols=27 Identities=33% Similarity=0.463 Sum_probs=21.0
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 24 SDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 24 ~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
+|++..++++.+.++.+. +|++++.+.
T Consensus 70 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 100 (116)
T 2ns1_B 70 ADDQLDEVIDIVSKAAYTGKIGDGKIFVAEL 100 (116)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 577788888888888765 589988774
No 289
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=44.55 E-value=20 Score=20.88 Aligned_cols=28 Identities=25% Similarity=0.389 Sum_probs=20.1
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE---D-GKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p---g-g~lii~d~ 50 (115)
.+|++..++++.+.++.+. | |++++.+.
T Consensus 65 V~d~~v~~vv~~I~~~~~tg~~GdGkIfV~~v 96 (112)
T 3mhy_A 65 VSDDQYEQVVEAIQKAANTGRIGDGKIFVLDI 96 (112)
T ss_dssp ECTTTHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EchHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 4566677777777777764 3 99999774
No 290
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=44.21 E-value=21 Score=20.95 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=21.5
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE---D-GKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p---g-g~lii~d~ 50 (115)
.+|++..++++.+.++.+. | |++++.+.
T Consensus 65 V~d~~ve~vv~~I~~~a~Tg~~GDGkIFV~~V 96 (116)
T 4aff_A 65 VEDAQVDTVIDKIVAAARTGENGDGKIFVSPV 96 (116)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCEEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 4677788888888888764 3 89998774
No 291
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=44.08 E-value=31 Score=20.07 Aligned_cols=27 Identities=11% Similarity=0.164 Sum_probs=20.8
Q ss_pred ChHHHHHHHHHHHh-hCCC-CCEEEEEee
Q 048196 24 SDDHCLKLLKIYYK-SIPE-DGKVIVVES 50 (115)
Q Consensus 24 ~d~~~~~iL~~~~~-aL~p-gg~lii~d~ 50 (115)
+|+.+.+++..+.+ ++.. +|.+++.|.
T Consensus 69 ~de~vd~vv~~I~~~~~t~~~G~ifVsdV 97 (111)
T 3dfe_A 69 NREMAEKIADQVAIKFFTDYAGIIYICEA 97 (111)
T ss_dssp SHHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhCCCCEEEEEEEe
Confidence 58889999999865 5554 688888876
No 292
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=49.93 E-value=4.8 Score=29.44 Aligned_cols=46 Identities=9% Similarity=-0.021 Sum_probs=34.2
Q ss_pred ccEEEeccc--cccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCC
Q 048196 11 GDAIFMKWI--LHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELP 56 (115)
Q Consensus 11 ~D~v~~~~v--lh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~ 56 (115)
+|+++.+.- --+.+-=++.+-+.+...++++||.||+.-.+.+.-.
T Consensus 277 ~DvvI~s~gG~P~d~n~yqa~Kal~~a~~~v~~GG~iIl~a~c~~g~G 324 (436)
T 2yjg_A 277 ADIVITSNGGYPLDQNIYQSVKGMTAGEAACKDGGVIIIAAECADGHG 324 (436)
Confidence 588887652 1234445578999999999999999999888776543
No 293
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=43.55 E-value=26 Score=20.13 Aligned_cols=28 Identities=25% Similarity=0.291 Sum_probs=21.3
Q ss_pred CChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
.+|++..++++.+.+++.. +|++++.+.
T Consensus 65 v~d~~v~~vv~~I~~~~~tg~~GdGkiFV~~V 96 (112)
T 1hwu_A 65 VDDKVVEQAVDAIIKAARTGKIGDGKIFVQEV 96 (112)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 3677788888888888765 488888764
No 294
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=43.02 E-value=11 Score=26.64 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=26.2
Q ss_pred ccEEEecccc-----ccCCh--HHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 11 GDAIFMKWIL-----HNWSD--DHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 11 ~D~v~~~~vl-----h~~~d--~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
.|+|++---. +...+ ....++++.+.+.|+|||.+++..
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4999874222 12222 335678899999999999988754
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=42.15 E-value=56 Score=22.33 Aligned_cols=45 Identities=11% Similarity=0.231 Sum_probs=27.0
Q ss_pred C-CCCCCCC-cccEEEeccccccCC----hHH-HHHHHHHHHhhCCCCC-EEEE
Q 048196 2 D-DMFQNVP-KGDAIFMKWILHNWS----DDH-CLKLLKIYYKSIPEDG-KVIV 47 (115)
Q Consensus 2 g-d~~~~~p-~~D~v~~~~vlh~~~----d~~-~~~iL~~~~~aL~pgg-~lii 47 (115)
| ||++.-| +.|+|++=..- .-+ |.. ...+|.-+.+.|+||| .+++
T Consensus 129 G~Df~~~~~~~~DvVLSDMAP-nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 129 GVDVFYKPSEISDTLLCDIGE-SSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp SCCGGGSCCCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cCCccCCCCCCCCEEEeCCCC-CCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 5 8887434 46988854332 211 211 2235666678899999 6766
No 296
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=41.78 E-value=80 Score=21.41 Aligned_cols=42 Identities=10% Similarity=0.301 Sum_probs=26.2
Q ss_pred CCcccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecC
Q 048196 8 VPKGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILP 53 (115)
Q Consensus 8 ~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~ 53 (115)
+.+.|+|++...-..+++++...+.+ .++.||.++.+.....
T Consensus 56 L~~~D~vV~~~~~~~l~~~~~~~l~~----yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 56 FSPYQLVVLDYNGDSWPEETNRRFLE----YVQNGGGVVIYHAADN 97 (281)
T ss_dssp CTTCSEEEECCCSSCCCHHHHHHHHH----HHHTTCEEEEEGGGGG
T ss_pred hhcCCEEEEeCCCCcCCHHHHHHHHH----HHHcCCCEEEEecccc
Confidence 43469999776555677665444444 3344888888776443
No 297
>2jso_A Polymyxin resistance protein PMRD; antibiotic resistance, transcription, signaling Pro; NMR {Escherichia coli}
Probab=41.20 E-value=19 Score=20.14 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=15.8
Q ss_pred CceeCCHHHHHHHHHhCC
Q 048196 78 SGKKRTKHEFLTLATGAG 95 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aG 95 (115)
+++.|+.+||.++.+.+|
T Consensus 68 ~As~Ys~~eW~~~~~~~~ 85 (88)
T 2jso_A 68 SASSYSPDEWERQCKVAG 85 (88)
T ss_dssp EEEECCHHHHHHHHHHTT
T ss_pred eccccCHHHHHHHHhhcc
Confidence 567899999999999876
No 298
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=41.10 E-value=29 Score=19.93 Aligned_cols=28 Identities=21% Similarity=0.414 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
.+|++..++++.+.++++. +|++++.+.
T Consensus 65 v~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (112)
T 2eg2_A 65 VRDEDVEKVVETIVKTAQTGRVGDGKIFIIPV 96 (112)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 3677788888888887754 488888764
No 299
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=40.98 E-value=11 Score=26.04 Aligned_cols=38 Identities=13% Similarity=0.185 Sum_probs=26.2
Q ss_pred ccEEEeccccc----cCChHHHHHHHHHHHhhCCCC--CEEEEE
Q 048196 11 GDAIFMKWILH----NWSDDHCLKLLKIYYKSIPED--GKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh----~~~d~~~~~iL~~~~~aL~pg--g~lii~ 48 (115)
+|+|+.-...+ ..+......+|.-+.+.|+|| |.+++-
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 59999876665 121122346788888999999 988773
No 300
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=40.64 E-value=17 Score=23.32 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=12.6
Q ss_pred ceeCCHHHHHHHHHhCCCCe
Q 048196 79 GKKRTKHEFLTLATGAGFSG 98 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~ 98 (115)
-...|++|+.+.|++.||.+
T Consensus 45 ~~I~TQeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 45 ERFGSQGEIVEALKQEGFEN 64 (180)
T ss_dssp TCCCSHHHHHHHHHHTTCTT
T ss_pred CCcCCHHHHHHHHHHCCCcc
Confidence 34456666666666666665
No 301
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=40.35 E-value=74 Score=22.37 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=29.6
Q ss_pred CCc-ccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 048196 8 VPK-GDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESI 51 (115)
Q Consensus 8 ~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~ 51 (115)
.|. +|++++..- -+-......|+++...|+||+++++....
T Consensus 97 ~~~~~~~v~~~lp---k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 97 YPQQPGVVLIKVP---KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp CCSSCSEEEEECC---SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred cccCCCEEEEEcC---CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 443 588776432 22456788999999999999999887653
No 302
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=39.67 E-value=10 Score=27.22 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 048196 28 CLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~lii~ 48 (115)
..+.++.++++|+|||.++..
T Consensus 310 t~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 310 LRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEe
Confidence 467889999999999998764
No 303
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=39.48 E-value=17 Score=24.57 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=12.7
Q ss_pred CCCCEEEEEeeecCCC
Q 048196 40 PEDGKVIVVESILPEL 55 (115)
Q Consensus 40 ~pgg~lii~d~~~~~~ 55 (115)
.|||.-+|+|.+.+..
T Consensus 94 GPgGvaiiVe~lTDN~ 109 (249)
T 1kon_A 94 GPGGTAIMIECLSDNR 109 (249)
T ss_dssp ETTTEEEEEEEEESCH
T ss_pred CCCceEEEEEEecCCH
Confidence 3899999999887753
No 304
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=38.60 E-value=35 Score=20.33 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=20.6
Q ss_pred CChHHHHHHHHHHHhhCCCCC-EEEEEe
Q 048196 23 WSDDHCLKLLKIYYKSIPEDG-KVIVVE 49 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~pgg-~lii~d 49 (115)
.+|+++.+++..+.++.+.|. ++++.+
T Consensus 85 v~d~~ve~vv~aI~~~a~tg~IKIfV~p 112 (120)
T 3ce8_A 85 HPAAQQAALLTALALVCKHNPCRYWIMP 112 (120)
T ss_dssp EEGGGHHHHHHHHHHHTTTSCCEEEEEE
T ss_pred ECHHHHHHHHHHHHHHcCCCCEEEEEEE
Confidence 357788999999999987777 555543
No 305
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=38.10 E-value=33 Score=17.77 Aligned_cols=24 Identities=13% Similarity=-0.094 Sum_probs=18.3
Q ss_pred CceeCCHHHHHHHHHhCCCCeeEE
Q 048196 78 SGKKRTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~~~~ 101 (115)
+-.-.+.++-+++|+++||.....
T Consensus 12 dv~G~~~~~A~~~L~~~Gl~~~~~ 35 (71)
T 3ouv_A 12 DVAGQTVDVAQKNMNVYGFTKFSQ 35 (71)
T ss_dssp CCTTCBHHHHHHHHHHTTCCCEEE
T ss_pred CcCCCCHHHHHHHHHHCCCeEEEE
Confidence 433457889999999999987543
No 306
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=38.06 E-value=43 Score=18.38 Aligned_cols=23 Identities=43% Similarity=0.377 Sum_probs=16.5
Q ss_pred CCHHHHHHHHH----hCCCCeeEEEEc
Q 048196 82 RTKHEFLTLAT----GAGFSGTRFEWF 104 (115)
Q Consensus 82 rt~~e~~~ll~----~aGf~~~~~~~~ 104 (115)
++.+|-.++.+ ++||.+.++.|.
T Consensus 54 ~sLdEAlE~AE~eYeeaGF~V~RVRPe 80 (84)
T 2lmc_A 54 ETLDEALELAEWQYVPAGFEVTRVRPC 80 (84)
T ss_dssp SSHHHHHHHHHHTTGGGTCEEEEEEEE
T ss_pred ccHHHHHHHHHHHhhhccceEEEeccc
Confidence 45665555554 799999998875
No 307
>3q7r_A Transcriptional regulatory protein; CHXR, receiver domain, transcription factor, OMPR, chlamydia transcription; 1.60A {Chlamydia trachomatis} PDB: 3q7s_A* 3q7t_A
Probab=37.97 E-value=51 Score=19.31 Aligned_cols=29 Identities=10% Similarity=0.234 Sum_probs=18.6
Q ss_pred CCCC-CCCcc-cEEEeccccccCChHHHHHHHHH
Q 048196 3 DMFQ-NVPKG-DAIFMKWILHNWSDDHCLKLLKI 34 (115)
Q Consensus 3 d~~~-~~p~~-D~v~~~~vlh~~~d~~~~~iL~~ 34 (115)
++|. .++.+ |++++..+ +.+|.++++|.+
T Consensus 64 ~ifS~k~~~~~dliVLfD~---F~EEa~v~vLd~ 94 (121)
T 3q7r_A 64 EIRSPKSLEGSFVLVLLDF---FDEETSVDLLDR 94 (121)
T ss_dssp TCCCCTTCCSCEEEEEESS---CCHHHHHHHHHT
T ss_pred HhcCCCCCCcccEEEEehh---hchHHHHHHHhC
Confidence 5666 45554 88877655 456667777764
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=37.75 E-value=15 Score=24.35 Aligned_cols=21 Identities=10% Similarity=0.338 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 048196 28 CLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~lii~ 48 (115)
....|+.+++.|+|||.++|.
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEE
Confidence 567788889999999999885
No 309
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=37.15 E-value=17 Score=24.42 Aligned_cols=18 Identities=11% Similarity=0.071 Sum_probs=14.2
Q ss_pred CceeCCHHHHHHHHHhCC
Q 048196 78 SGKKRTKHEFLTLATGAG 95 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aG 95 (115)
+-+.||..+++.+|.+.|
T Consensus 100 DN~nRt~~~vR~~f~K~g 117 (240)
T 1mw7_A 100 DNPTRTIANLKSYFNKTQ 117 (240)
T ss_dssp SCHHHHHHHHHHHHTTST
T ss_pred CCHHHHHHHHHHHHhhcC
Confidence 556688888888888877
No 310
>2gw8_A PII signal transduction protein; transcriptional regulation, neisse structural genomics, oxford protein production facility; 1.85A {Neisseria meningitidis}
Probab=36.43 E-value=29 Score=20.03 Aligned_cols=27 Identities=22% Similarity=0.421 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 24 SDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 24 ~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
+|++..++++.+.++++. +|++++.+.
T Consensus 68 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 2gw8_A 68 ADDAVERAIDVIVEVARSGKIGDGKIFVLPV 98 (114)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 567778888888887654 389988774
No 311
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=36.17 E-value=15 Score=28.33 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 26 DHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 26 ~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
....++++++.+.|+|||.+++.-
T Consensus 634 ~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 634 RDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 346789999999999999998543
No 312
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.76 E-value=58 Score=18.05 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=22.2
Q ss_pred eCCHHHHHHHHHhCCCCeeEEEEcCCceEEEEE
Q 048196 81 KRTKHEFLTLATGAGFSGTRFEWFTCNLWVRDF 113 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~ 113 (115)
.-|.+++.++|.+.| .+..+.-....++.|+.
T Consensus 26 ~~t~~~l~~~F~~~G-~i~~~~i~~~g~afV~f 57 (108)
T 1x4c_A 26 SGSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 57 (108)
T ss_dssp SCCHHHHHHHHGGGS-CEEEEEEETTTEEEEEE
T ss_pred CCCHHHHHHHHHhcC-CEeEEEEecCCEEEEEE
Confidence 457899999999998 56555443335666654
No 313
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=35.46 E-value=23 Score=19.51 Aligned_cols=18 Identities=6% Similarity=0.180 Sum_probs=14.8
Q ss_pred CHHHHHHHHHhCCCCeeE
Q 048196 83 TKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 83 t~~e~~~ll~~aGf~~~~ 100 (115)
-+.||+++|..+|....+
T Consensus 30 lP~eW~~ll~~sGIs~~e 47 (80)
T 1f3m_A 30 MPEQWARLLQTSNITKSE 47 (80)
T ss_dssp CCHHHHHHHHTSCCCHHH
T ss_pred CCHHHHHHHHHcCCCHHH
Confidence 468999999999987544
No 314
>3bzq_A Nitrogen regulatory protein P-II; GLNB, GLNK, signal transdu protein, nucleotide-binding, transcription; 1.40A {Mycobacterium tuberculosis H37RV} PDB: 3lf0_A*
Probab=35.21 E-value=26 Score=20.20 Aligned_cols=27 Identities=26% Similarity=0.276 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 24 SDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 24 ~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
+|++..++++.+.+++.. +|++++.+.
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 3bzq_A 68 DDSIVDKVVDSIVRAARTGKIGDGKVWVSPV 98 (114)
T ss_dssp ETTTHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 466677777777777655 488888774
No 315
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=33.80 E-value=24 Score=20.61 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=13.7
Q ss_pred HHHHHHHHHhCCCCee
Q 048196 84 KHEFLTLATGAGFSGT 99 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~ 99 (115)
.++|+++|..+|.+..
T Consensus 23 ppeWk~LL~~aGITe~ 38 (107)
T 1ej5_A 23 DPDLRSLFSRAGISEA 38 (107)
T ss_dssp CHHHHHHHHHTTCCHH
T ss_pred CHHHHHHHHHcCCCHH
Confidence 6899999999998754
No 316
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=33.58 E-value=62 Score=18.24 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHhCCCCeeEEEEcCCceEEEEE
Q 048196 82 RTKHEFLTLATGAGFSGTRFEWFTCNLWVRDF 113 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~ 113 (115)
-|.+++.++|...| .+..+.-....++.|+.
T Consensus 28 ~t~~~l~~~F~~~G-~v~~~~i~~~g~afV~f 58 (115)
T 3beg_B 28 GSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 58 (115)
T ss_dssp CCTTHHHHHHGGGS-CEEEEEECTTSEEEEEE
T ss_pred CCHHHHHHHHHhcC-CeEEEEEecCCEEEEEE
Confidence 46788999999888 55555433335666654
No 317
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=33.27 E-value=68 Score=18.10 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCCeeEEEEc
Q 048196 84 KHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~~~~~~ 104 (115)
..++.+|+++.|++.......
T Consensus 66 ~~dI~~~~~~~G~~v~~~e~~ 86 (98)
T 1jdq_A 66 KERIPETVKKLGHEVLEIEEV 86 (98)
T ss_dssp HHHHHHHHHHSSCCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEEEe
Confidence 468889999999998776655
No 318
>2o66_A PII protein; regulation of nitrogen and carbon metabolism, biosynthetic protein; HET: FLC; 1.90A {Arabidopsis thaliana} PDB: 2o67_A 2rd5_C*
Probab=33.02 E-value=39 Score=20.39 Aligned_cols=28 Identities=18% Similarity=0.319 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 048196 23 WSDDHCLKLLKIYYKSIPE----DGKVIVVES 50 (115)
Q Consensus 23 ~~d~~~~~iL~~~~~aL~p----gg~lii~d~ 50 (115)
.+|++..++++.+.++++. +|++++.+.
T Consensus 78 V~de~ve~Vv~~I~~~~~tg~~GdGkIFV~pV 109 (135)
T 2o66_A 78 VKKDQVESVINTIIEGARTGEIGDGKIFVLPV 109 (135)
T ss_dssp EEGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 3577788888888888764 489999875
No 319
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=32.27 E-value=36 Score=19.86 Aligned_cols=27 Identities=15% Similarity=0.370 Sum_probs=20.0
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 048196 24 SDDHCLKLLKIYYKSIPE---D-GKVIVVES 50 (115)
Q Consensus 24 ~d~~~~~iL~~~~~aL~p---g-g~lii~d~ 50 (115)
+|++..++++.+.++++. | |++++.+.
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (119)
T 2j9c_A 68 KEEDVDNVIDIICENARTGNPGDGKIFVIPV 98 (119)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 567778888888877654 4 88888774
No 320
>1ny8_A Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: d.52.6.1
Probab=32.11 E-value=35 Score=19.53 Aligned_cols=18 Identities=28% Similarity=0.191 Sum_probs=15.1
Q ss_pred eeCCHHHHHHHHHhCCCC
Q 048196 80 KKRTKHEFLTLATGAGFS 97 (115)
Q Consensus 80 ~~rt~~e~~~ll~~aGf~ 97 (115)
+.+|++||.+.-...||-
T Consensus 73 ~t~TP~Ew~~~~~~~~~~ 90 (97)
T 1ny8_A 73 KAYTPAEWARDRKLNGFL 90 (97)
T ss_dssp EECCHHHHHHHHHTTSSS
T ss_pred EecChHHHHhhhhhcchh
Confidence 678999999888878874
No 321
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=31.86 E-value=34 Score=18.56 Aligned_cols=18 Identities=6% Similarity=0.156 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHhCCCCee
Q 048196 82 RTKHEFLTLATGAGFSGT 99 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~ 99 (115)
-..+++.+.|+++||+++
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 467889999999999874
No 322
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=31.72 E-value=10 Score=25.63 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=21.1
Q ss_pred cCChHHHHHHHHHHHh-------------hCCCCCEEEEEeeecCCC
Q 048196 22 NWSDDHCLKLLKIYYK-------------SIPEDGKVIVVESILPEL 55 (115)
Q Consensus 22 ~~~d~~~~~iL~~~~~-------------aL~pgg~lii~d~~~~~~ 55 (115)
++|.+...+.+++..- ...|||.-+|+|...+..
T Consensus 63 nmPkd~IerAIkk~~g~~~~~~yeei~YEgyGPgGvaviVe~lTDN~ 109 (247)
T 4f3q_A 63 NMPKDTITRAIKRGAGSGAGDNLVEVRYEGYGPSGVAVMVDCLTDNK 109 (247)
T ss_dssp TCCHHHHHHHHHHCC-----CCCEEEEEEEECGGGCEEEEEEEESCH
T ss_pred CCCHHHHHHHHHHhcCCCCcCCceEEEEEEEcCCCeEEEEEEeCCCH
Confidence 4555555666665432 124888888888877754
No 323
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=31.70 E-value=33 Score=21.17 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=14.6
Q ss_pred ceeCCHHHHHHHHHhCCCCee
Q 048196 79 GKKRTKHEFLTLATGAGFSGT 99 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~ 99 (115)
....|.+|+.+.|++.||.+.
T Consensus 17 ~~~~tq~eL~~~L~~~G~~Vt 37 (149)
T 1b4a_A 17 NDIETQDELVDRLREAGFNVT 37 (149)
T ss_dssp SCCCSHHHHHHHHHHTTCCCC
T ss_pred CCCccHHHHHHHHHHcCCCcC
Confidence 344677788888888887643
No 324
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=31.67 E-value=28 Score=19.10 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=12.7
Q ss_pred CHHHHHHHHHhCCCCe
Q 048196 83 TKHEFLTLATGAGFSG 98 (115)
Q Consensus 83 t~~e~~~ll~~aGf~~ 98 (115)
...|-..||+.|||..
T Consensus 20 eA~eAC~WLRaaGFPQ 35 (81)
T 2h80_A 20 EAKEACDWLRAAGFPQ 35 (81)
T ss_dssp HHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHcCCcH
Confidence 3457789999999964
No 325
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=31.34 E-value=22 Score=24.61 Aligned_cols=22 Identities=9% Similarity=0.187 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhCCCCCEEEEE
Q 048196 27 HCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 27 ~~~~iL~~~~~aL~pgg~lii~ 48 (115)
.....|..+++.|+|||.++|.
T Consensus 84 ~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 84 WAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEE
Confidence 3577888889999999999884
No 326
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=30.30 E-value=76 Score=17.75 Aligned_cols=31 Identities=13% Similarity=0.136 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHhCCCCeeEEEEc-CCceEEEEE
Q 048196 82 RTKHEFLTLATGAGFSGTRFEWF-TCNLWVRDF 113 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~~~~-~~~~~lie~ 113 (115)
-|.++++++|.+.| ++..++-. .-.++.+|.
T Consensus 19 ~te~~L~~lF~q~G-~V~~~~l~~~kGfaFVey 50 (89)
T 2wbr_A 19 IDGPTLRTLCMQHG-PLVSFHPYLNQGIALCKY 50 (89)
T ss_dssp CCCHHHHHHHHHHS-CEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHhhC-CEEEEEEcCCCcEEEEEE
Confidence 46789999999999 77766544 356777764
No 327
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=30.13 E-value=1.4e+02 Score=20.65 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=36.7
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeecCCCCCCc-hhhhhchhccchhcccCCCceeCCHHHHHHHHHhCCC
Q 048196 28 CLKLLKIYYKSIPEDGKVIVVESILPELPETS-TVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAGF 96 (115)
Q Consensus 28 ~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~aGf 96 (115)
...+.+.+++||..|...+...++.+-....- -++.+.+ +. .+++...++.++-.++++.|+
T Consensus 73 ~~~l~~~L~~Al~~~~~~l~yQPiv~l~~g~i~g~EaL~R------w~-~~~~g~i~p~~fi~~ae~~gl 135 (340)
T 4hjf_A 73 RLALEADLRGAIGRGEITPYFQPIVRLSTGALSGFEALAR------WI-HPRRGMLPPDEFLPLIEEMGL 135 (340)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEEEEETTTCCEEEEEEEEE------EE-ETTTEEECHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeeEEECCCCcEEEEEEEEE------EE-CCCCCccCHHHHHHHHHHcCc
Confidence 45677788889998888888888776332211 1111111 11 135555667777777766664
No 328
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=29.91 E-value=66 Score=22.74 Aligned_cols=48 Identities=13% Similarity=-0.001 Sum_probs=30.9
Q ss_pred CCCCC-CCCc-ccEEEeccccc-cCC-hHHHHHHHHHHHhhCCC--CCEEEEEe
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILH-NWS-DDHCLKLLKIYYKSIPE--DGKVIVVE 49 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh-~~~-d~~~~~iL~~~~~aL~p--gg~lii~d 49 (115)
+|+++ +.+. .|+|++.--.. .+. .++..++.+.+.+.|++ |++++|+-
T Consensus 291 ~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 291 GDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp CCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred CChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 57776 3343 49998864432 222 24567777877777776 88888864
No 329
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=29.37 E-value=1.1e+02 Score=21.90 Aligned_cols=42 Identities=12% Similarity=-0.107 Sum_probs=24.2
Q ss_pred CCCCCCCC-cccEEEeccccccCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 2 DDMFQNVP-KGDAIFMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 2 gd~~~~~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
||.++..+ ..|+|++.--..... ..+++.+. .|+|+|.+++.
T Consensus 344 ~d~~~~~~~~fD~Vv~dPPr~g~~----~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 344 ASDREVSVKGFDTVIVDPPRAGLH----PRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp CCTTTCCCTTCSEEEECCCTTCSC----HHHHHHHH-HHCCSEEEEEE
T ss_pred CChHHcCccCCCEEEEcCCccchH----HHHHHHHH-hcCCCcEEEEE
Confidence 56666444 359888743322222 13455444 48999988774
No 330
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=29.19 E-value=21 Score=25.44 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=15.7
Q ss_pred HHHHHHH----HhhCCCCCEEEEEe
Q 048196 29 LKLLKIY----YKSIPEDGKVIVVE 49 (115)
Q Consensus 29 ~~iL~~~----~~aL~pgg~lii~d 49 (115)
.+.++.+ +++|+|||.+++.-
T Consensus 290 ~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 290 WEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 4555555 89999999998753
No 331
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=28.98 E-value=31 Score=19.89 Aligned_cols=20 Identities=15% Similarity=0.074 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHhCCCCeeEE
Q 048196 82 RTKHEFLTLATGAGFSGTRF 101 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~ 101 (115)
-+.+|..+||...||....+
T Consensus 24 Ssp~EV~~WL~~kgFS~~tv 43 (99)
T 1wwu_A 24 SGPDEVRAWLEAKAFSPRIV 43 (99)
T ss_dssp CCHHHHHHHHHHHTCCTTHH
T ss_pred CCHHHHHHHHHHcCCCHHHH
Confidence 47899999999999987533
No 332
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=28.67 E-value=87 Score=17.91 Aligned_cols=30 Identities=7% Similarity=-0.069 Sum_probs=24.0
Q ss_pred HHHHHHHHHhCCCCeeEEEEcCC---ceEEEEE
Q 048196 84 KHEFLTLATGAGFSGTRFEWFTC---NLWVRDF 113 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~~~~~~~~---~~~lie~ 113 (115)
-.|+.+.|+++|...-++...+. .+.++|.
T Consensus 26 WPEv~~~L~~aGi~~ysIfl~~~~~~LF~~~E~ 58 (104)
T 1x8d_A 26 WPELEAVLKSHGAHNYAIYLDKARNLLFAMVEI 58 (104)
T ss_dssp CHHHHHHHHHTTEEEEEEEEETTTTEEEEEEEE
T ss_pred CHHHHHHHHHcCCeEEEEEEECCCCeEEEEEEE
Confidence 36999999999998888877753 5778775
No 333
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=28.35 E-value=27 Score=24.09 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=17.5
Q ss_pred eCCHHHHHHHHHhCCCCeeE
Q 048196 81 KRTKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 81 ~rt~~e~~~ll~~aGf~~~~ 100 (115)
.++.+++.++++++||+.++
T Consensus 321 ~~~~~~~~~~i~~~G~~~~~ 340 (350)
T 3t7v_A 321 DRDIKSVVRRLEIMGMKPAR 340 (350)
T ss_dssp CCCHHHHHHHHHHHTCEECC
T ss_pred cCCHHHHHHHHHHcCCcccc
Confidence 46899999999999998764
No 334
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, immature carcinoma transcript 1; NMR {Mus musculus} SCOP: d.50.4.1
Probab=28.06 E-value=63 Score=18.92 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=21.7
Q ss_pred cCChHHHHHHHHHHHhhCCCCCEEEE
Q 048196 22 NWSDDHCLKLLKIYYKSIPEDGKVIV 47 (115)
Q Consensus 22 ~~~d~~~~~iL~~~~~aL~pgg~lii 47 (115)
-+|++....++++....+..+|.|+|
T Consensus 55 ~Lp~~~k~rl~~~~~~ri~~~G~ivv 80 (112)
T 1j26_A 55 WIEEPVRQKIALTHKNKINKAGELVL 80 (112)
T ss_dssp TSCHHHHHHHHHHTTTTBCSSSEEEE
T ss_pred cCCHHHHHHHHHhhccccccCCeEEE
Confidence 57788888999988888888888776
No 335
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=27.74 E-value=31 Score=22.55 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=17.4
Q ss_pred CCCCC-CCCc-ccEEEeccccccCChHHHHHHH
Q 048196 2 DDMFQ-NVPK-GDAIFMKWILHNWSDDHCLKLL 32 (115)
Q Consensus 2 gd~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL 32 (115)
||+.+ +++. .+..++++.-++++.+....++
T Consensus 83 ~D~~~~~~~~~~~~~vv~nlPy~~~~~~l~~~l 115 (244)
T 1qam_A 83 KDILQFKFPKNQSYKIFGNIPYNISTDIIRKIV 115 (244)
T ss_dssp CCGGGCCCCSSCCCEEEEECCGGGHHHHHHHHH
T ss_pred ChHHhCCcccCCCeEEEEeCCcccCHHHHHHHH
Confidence 67777 5653 3555666666666554444443
No 336
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=27.44 E-value=60 Score=16.53 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=18.1
Q ss_pred CceeCCHHHHHHHHHhCCCCe
Q 048196 78 SGKKRTKHEFLTLATGAGFSG 98 (115)
Q Consensus 78 ~g~~rt~~e~~~ll~~aGf~~ 98 (115)
.|..-|.+.+.++++.+|-++
T Consensus 13 ~g~~~t~~~I~~il~aaGvev 33 (58)
T 3a1y_A 13 VGKEINEENLKAVLQAAGVEP 33 (58)
T ss_dssp TTCCCCHHHHHHHHHHTTCCC
T ss_pred CCCCCCHHHHHHHHHHcCCCc
Confidence 567889999999999999654
No 337
>1mhm_B Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1
Probab=27.43 E-value=64 Score=17.40 Aligned_cols=26 Identities=8% Similarity=-0.204 Sum_probs=21.1
Q ss_pred ceeCCHHHHHHHHHhCCCCeeEEEEc
Q 048196 79 GKKRTKHEFLTLATGAGFSGTRFEWF 104 (115)
Q Consensus 79 g~~rt~~e~~~ll~~aGf~~~~~~~~ 104 (115)
=|..+.+.|.++|..+.-+++.....
T Consensus 37 LR~i~r~~w~~~L~~a~C~IlS~~sn 62 (72)
T 1mhm_B 37 LRSLSKAQLDEILGPAECTIVDNLSN 62 (72)
T ss_dssp GGGCCHHHHHHHHHHHTCEEEEEEEC
T ss_pred cccCCHHHHHHHHhhcCCEEEEEecC
Confidence 34568899999999999888876654
No 338
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=27.13 E-value=37 Score=16.11 Aligned_cols=16 Identities=19% Similarity=0.005 Sum_probs=13.6
Q ss_pred CHHHHHHHHHhCCCCe
Q 048196 83 TKHEFLTLATGAGFSG 98 (115)
Q Consensus 83 t~~e~~~ll~~aGf~~ 98 (115)
+.+++.+.++++||..
T Consensus 50 ~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 50 TQDLIKEALLDAGQEV 65 (66)
T ss_dssp CHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHcCCCc
Confidence 6788999999999975
No 339
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=26.93 E-value=48 Score=21.29 Aligned_cols=29 Identities=3% Similarity=0.234 Sum_probs=20.5
Q ss_pred ccCC-hHHHHHHHHHHHhhCCCCCEEEEEe
Q 048196 21 HNWS-DDHCLKLLKIYYKSIPEDGKVIVVE 49 (115)
Q Consensus 21 h~~~-d~~~~~iL~~~~~aL~pgg~lii~d 49 (115)
.+|. .....++.+++.+.+++|+.+++.|
T Consensus 127 ~Dw~~~~~~~~i~~~v~~~~~~g~IiL~Hd 156 (216)
T 2c71_A 127 NDWIPSTTAEQRAAAVINGVRDGTIILLHD 156 (216)
T ss_dssp STTCTTSCHHHHHHHHHHHCCTTBEEEEES
T ss_pred ccccCCCCHHHHHHHHHhcCCCCcEEEEEC
Confidence 3665 4446788888888899988665554
No 340
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=26.54 E-value=1.5e+02 Score=19.95 Aligned_cols=44 Identities=9% Similarity=-0.055 Sum_probs=29.7
Q ss_pred cEEEeccccccCChH-----HHHHHHHHHHhhCCCCCEEEEEeeecCCC
Q 048196 12 DAIFMKWILHNWSDD-----HCLKLLKIYYKSIPEDGKVIVVESILPEL 55 (115)
Q Consensus 12 D~v~~~~vlh~~~d~-----~~~~iL~~~~~aL~pgg~lii~d~~~~~~ 55 (115)
|.|++...-+.-... ...+++..+++..+|+.++++.++-....
T Consensus 95 D~VilQe~S~~~~~~~~~~~~~~~l~~~ir~~~~p~ak~il~~TWa~~~ 143 (271)
T 4i8i_A 95 DYISVQQASPLSGIYDSYKASLPELVNYIRERIGKETVLMMHQTWAYAT 143 (271)
T ss_dssp SEEEECCCGGGTTCHHHHHHHHHHHHHHHHTTSCTTCEEEEEECCCCCT
T ss_pred CEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCEEEEEeccCCCC
Confidence 999998776533322 24556666666555999999999865543
No 341
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=26.21 E-value=1.4e+02 Score=21.30 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=45.0
Q ss_pred ccCChHHHHHHHHHHHhhCCCCCEEEE----EeeecCCCCC-CchhhhhchhccchhcccCCCceeCCHHHHHHHHHhCC
Q 048196 21 HNWSDDHCLKLLKIYYKSIPEDGKVIV----VESILPELPE-TSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGAG 95 (115)
Q Consensus 21 h~~~d~~~~~iL~~~~~aL~pgg~lii----~d~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~aG 95 (115)
+..++++..++++.....--|.++.++ .++.+++... .++.......+...+.+. -++.-....+.+.++.||
T Consensus 104 ~~i~~~di~~~i~~a~~~~~p~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v--~~~~~~v~n~~~~~~~AG 181 (419)
T 4a2a_A 104 RSITLDILSEMQSEALEKLKENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSI--VVPLKVYEMFYNFLQDTV 181 (419)
T ss_dssp EECCHHHHHHHHHHHHHHHSCTTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEE--EEEHHHHHHHHHHHHTTS
T ss_pred CEECHHHHHHHHHHhhhhcCCCCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEE--EEeHHHHHHHHHHHHHcC
Confidence 468888888888876654345556554 3455554421 111111111112222221 233334678899999999
Q ss_pred CCeeEEEE
Q 048196 96 FSGTRFEW 103 (115)
Q Consensus 96 f~~~~~~~ 103 (115)
|++..+..
T Consensus 182 L~v~~lv~ 189 (419)
T 4a2a_A 182 KSPFQLKS 189 (419)
T ss_dssp CSCEEEEE
T ss_pred CcEEEEEE
Confidence 99987654
No 342
>3aaf_A Werner syndrome ATP-dependent helicase; helix-turn-helix, winged-helix, protein-DNA complex, DNA-BIN helicase; HET: DNA; 1.90A {Homo sapiens} PDB: 2axl_A
Probab=25.52 E-value=36 Score=20.39 Aligned_cols=70 Identities=14% Similarity=0.087 Sum_probs=40.4
Q ss_pred ccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHHHHh---CCCC
Q 048196 21 HNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATG---AGFS 97 (115)
Q Consensus 21 h~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~---aGf~ 97 (115)
.|+++ ++.++|.-+++.=..=|.-.|+|.+.......- ...++ .+-.++-|+..+..+|++++++ .||=
T Consensus 12 ~D~T~-~AqkiLs~V~r~~~rfG~~~iidvLrGs~~~ki-----~~~~~--~l~tfGigk~~s~~~w~~lirqLi~~G~L 83 (134)
T 3aaf_A 12 WDFGP-QAFKLLSAVDILGEKFGIGLPILFLRGSNSQRL-----ADQYR--RHSLFGTGKDQTESWWKAFSRQLITEGFL 83 (134)
T ss_dssp EECHH-HHHHHHHHHHHTTTCSCTHHHHHHHTTCCCTTS-----CGGGG--GSTTTTTTTTSCHHHHHHHHHHHHHTTSE
T ss_pred cCchH-HHHHHHHHHHHHcCcccccchhhhhcCCcHHHH-----HHHhC--CCCccCCCCCCCHHHHHHHHHHHHHcCCc
Confidence 34554 478888888874222355666776655443221 11122 2222345789999999998875 5753
Q ss_pred e
Q 048196 98 G 98 (115)
Q Consensus 98 ~ 98 (115)
.
T Consensus 84 ~ 84 (134)
T 3aaf_A 84 V 84 (134)
T ss_dssp E
T ss_pred e
Confidence 3
No 343
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=25.36 E-value=80 Score=21.94 Aligned_cols=23 Identities=9% Similarity=-0.148 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCCCeeEEEEcCC
Q 048196 84 KHEFLTLATGAGFSGTRFEWFTC 106 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~~~~~~~~ 106 (115)
...+++-|++|||++.++...++
T Consensus 228 ag~VRR~L~~aGF~V~k~~G~g~ 250 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGSSREIGR 250 (308)
T ss_dssp CHHHHHHHHHTTCEEEEEECC--
T ss_pred cHHHHHHHHHCCCEEEecCCCCC
Confidence 45788999999999988766554
No 344
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=25.31 E-value=1e+02 Score=20.63 Aligned_cols=34 Identities=9% Similarity=0.130 Sum_probs=21.4
Q ss_pred ccEEEeccccc-cCChHHHHHHHHHHHhhCCCCCEEEEE
Q 048196 11 GDAIFMKWILH-NWSDDHCLKLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 11 ~D~v~~~~vlh-~~~d~~~~~iL~~~~~aL~pgg~lii~ 48 (115)
.|+|++.++-. .++++ ..+.|++..+ .||.|+++
T Consensus 51 yDvIIl~d~~~~~l~~~-~~~~L~~yV~---~GGgLi~~ 85 (259)
T 3rht_A 51 QDLVILSDYPAERMTAQ-AIDQLVTMVK---AGCGLVML 85 (259)
T ss_dssp CSEEEEESCCGGGBCHH-HHHHHHHHHH---TTCEEEEE
T ss_pred CCEEEEcCCccccCCHH-HHHHHHHHHH---hCCeEEEe
Confidence 49999987654 35554 4455555444 47777776
No 345
>4e8u_A Putative uncharacterized protein T8P19.180; XS domain, RNA binding protein, RNA directed DNA methylation; 2.70A {Arabidopsis thaliana}
Probab=24.94 E-value=46 Score=21.16 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=23.9
Q ss_pred CHHHHHHHHHhCCCCeeEEEEcC-----CceEEEEE
Q 048196 83 TKHEFLTLATGAGFSGTRFEWFT-----CNLWVRDF 113 (115)
Q Consensus 83 t~~e~~~ll~~aGf~~~~~~~~~-----~~~~lie~ 113 (115)
+..++.+-|+.+||...++.++- ..++|+++
T Consensus 34 s~~~l~~~~~~~~F~p~kv~~l~~~~Gh~g~aIv~F 69 (172)
T 4e8u_A 34 SGSKLRDEYILRGFNPTRVRPLWNYLGHSGTAIVEF 69 (172)
T ss_dssp CSHHHHHHHHHTTCCCSEEEEEECSSBEEEEEEEEC
T ss_pred CHHHHHHHHHhcCCCCceeEecccCCCCceeEEEEe
Confidence 45789999999999999999883 23456654
No 346
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=23.88 E-value=83 Score=21.38 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=30.3
Q ss_pred CcccEEEeccccccCC--hHHHHHHHHHHHhhCCCCCEEEEEee
Q 048196 9 PKGDAIFMKWILHNWS--DDHCLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 9 p~~D~v~~~~vlh~~~--d~~~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
.++|+++.-.-|-.+. .-.+..++..+.+++.|.|.|++--+
T Consensus 30 ~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~ 73 (268)
T 3ijw_A 30 KKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQ 73 (268)
T ss_dssp CTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred CCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecc
Confidence 3467777665554433 23478899999999999999988654
No 347
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=23.57 E-value=21 Score=22.20 Aligned_cols=21 Identities=10% Similarity=0.189 Sum_probs=16.7
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 048196 30 KLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 30 ~iL~~~~~aL~pgg~lii~d~ 50 (115)
..++.+.+.|+|||+++++-.
T Consensus 118 ~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 118 EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHHHHHHTEEEEEEEEECSC
T ss_pred HHHHHHHHHhccCCEEEEEcC
Confidence 356778889999999988654
No 348
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=23.47 E-value=95 Score=16.63 Aligned_cols=24 Identities=8% Similarity=-0.230 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCCeeEEEEcCCc
Q 048196 84 KHEFLTLATGAGFSGTRFEWFTCN 107 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~~~~~~~~~~ 107 (115)
...+.+|+++.|++........+.
T Consensus 50 ~~di~~~~~~~G~~~~~~~~~~~~ 73 (82)
T 3lvj_C 50 TRDIPGFCTFMEHELVAKETDGLP 73 (82)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSSS
T ss_pred HHHHHHHHHHCCCEEEEEEecCCE
Confidence 357888889999988765433333
No 349
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=23.43 E-value=55 Score=22.66 Aligned_cols=19 Identities=16% Similarity=0.184 Sum_probs=16.5
Q ss_pred HHHHHHHhhCCCCCEEEEE
Q 048196 30 KLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 30 ~iL~~~~~aL~pgg~lii~ 48 (115)
..++.+.++|+++|+++++
T Consensus 251 ~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 251 KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHHHHHHHSCTTCEEEEC
T ss_pred hhHHHHHHHhcCCCEEEEE
Confidence 5678888899999999987
No 350
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=22.86 E-value=42 Score=13.99 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhCCCC
Q 048196 27 HCLKLLKIYYKSIPED 42 (115)
Q Consensus 27 ~~~~iL~~~~~aL~pg 42 (115)
+..+-|+++++.|++|
T Consensus 12 dlqerlrklrkklrsg 27 (27)
T 3twe_A 12 DLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhcCC
Confidence 3455667777666554
No 351
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=22.52 E-value=1.2e+02 Score=17.27 Aligned_cols=32 Identities=13% Similarity=-0.055 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHhCCCCeeEEEEc---CCceEEEEE
Q 048196 82 RTKHEFLTLATGAGFSGTRFEWF---TCNLWVRDF 113 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~~~~---~~~~~lie~ 113 (115)
-|.++++++|++.|.++..+.-. ...++.|+.
T Consensus 40 ~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F 74 (111)
T 2jvr_A 40 CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEF 74 (111)
T ss_dssp CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEE
T ss_pred CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEE
Confidence 46788888888888544433221 134555554
No 352
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.50 E-value=28 Score=20.10 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHhCCCCeeE
Q 048196 82 RTKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~ 100 (115)
-+.+|..+||...||....
T Consensus 34 Ssp~EV~~WL~~kgFS~~t 52 (99)
T 2e8m_A 34 STPEDVKTWLQSKGFNPVT 52 (99)
T ss_dssp CCTTHHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHHcCCCHHH
Confidence 4678999999999998753
No 353
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=22.38 E-value=84 Score=15.60 Aligned_cols=19 Identities=11% Similarity=-0.108 Sum_probs=15.4
Q ss_pred CCHHHHHHHHHhCCCCeeE
Q 048196 82 RTKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~ 100 (115)
.+.+++.+.++++||....
T Consensus 51 ~~~~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 51 LPYDFILEKIKKTGKEVRS 69 (73)
T ss_dssp SCHHHHHHHHHTTSSCEEE
T ss_pred CCHHHHHHHHHHhCCCcee
Confidence 3578999999999997643
No 354
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=22.19 E-value=1.3e+02 Score=22.89 Aligned_cols=40 Identities=15% Similarity=0.268 Sum_probs=25.9
Q ss_pred ccEEEecccc-----ccCChHH-HHHHHHHHHhhCCCCCEEEEEee
Q 048196 11 GDAIFMKWIL-----HNWSDDH-CLKLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 11 ~D~v~~~~vl-----h~~~d~~-~~~iL~~~~~aL~pgg~lii~d~ 50 (115)
+|++++-... |+-+..+ ..++++.+.+++.+||+++|.-+
T Consensus 386 ~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~f 431 (651)
T 3af5_A 386 LETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAM 431 (651)
T ss_dssp CSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEecc
Confidence 5988874322 2333333 45667777888889999988654
No 355
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=22.14 E-value=70 Score=23.91 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=16.6
Q ss_pred HHHHHHHhhCC-CCCEEEEE
Q 048196 30 KLLKIYYKSIP-EDGKVIVV 48 (115)
Q Consensus 30 ~iL~~~~~aL~-pgg~lii~ 48 (115)
..++++.+.|+ |||++.++
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~V 357 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIV 357 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEE
T ss_pred HHHHHHHHHhCCCceeEEEE
Confidence 47899999999 99999774
No 356
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=21.49 E-value=71 Score=21.63 Aligned_cols=20 Identities=10% Similarity=0.253 Sum_probs=15.9
Q ss_pred HHHHHHhhCCCCCEEEEEee
Q 048196 31 LLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 31 iL~~~~~aL~pgg~lii~d~ 50 (115)
.++.+.+.|++||+++++-.
T Consensus 229 ~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 229 TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp GHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHHHHhccCCEEEEEcC
Confidence 46677789999999998654
No 357
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=21.09 E-value=38 Score=17.38 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=17.2
Q ss_pred cCChHHHHHHHHHHHhhCCCC
Q 048196 22 NWSDDHCLKLLKIYYKSIPED 42 (115)
Q Consensus 22 ~~~d~~~~~iL~~~~~aL~pg 42 (115)
.++++++..||+.+-+|+..|
T Consensus 4 ~lt~eq~~aILkaLdeaIe~G 24 (57)
T 3fxd_A 4 QLSDEQKETILKALNDAIEKG 24 (57)
T ss_dssp CCCHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHHHHcC
Confidence 468899999999888887665
No 358
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=20.96 E-value=67 Score=22.08 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=16.6
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 048196 30 KLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 30 ~iL~~~~~aL~pgg~lii~d~ 50 (115)
..++.+.++|+|||+++++-.
T Consensus 254 ~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 254 ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHHhcCCCEEEEEec
Confidence 356777889999999988653
No 359
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=20.96 E-value=89 Score=15.37 Aligned_cols=18 Identities=11% Similarity=0.145 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHhCCCCee
Q 048196 82 RTKHEFLTLATGAGFSGT 99 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~ 99 (115)
-+.+++.+.++++||...
T Consensus 46 ~~~~~i~~~i~~~Gy~~~ 63 (68)
T 3iwl_A 46 HSMDTLLATLKKTGKTVS 63 (68)
T ss_dssp SCHHHHHHHHHTTCSCEE
T ss_pred CCHHHHHHHHHHcCCceE
Confidence 467899999999999864
No 360
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=20.94 E-value=47 Score=18.62 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.2
Q ss_pred HHHHHHHHHhCCCCe
Q 048196 84 KHEFLTLATGAGFSG 98 (115)
Q Consensus 84 ~~e~~~ll~~aGf~~ 98 (115)
..|-..||+.|||..
T Consensus 23 A~eAC~WLRaaGFPQ 37 (91)
T 2dky_A 23 AKEACDWLRATGFPQ 37 (91)
T ss_dssp HHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHcCChH
Confidence 457788999999975
No 361
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=20.89 E-value=76 Score=16.18 Aligned_cols=18 Identities=11% Similarity=0.069 Sum_probs=15.0
Q ss_pred CHHHHHHHHHhCCCCeeE
Q 048196 83 TKHEFLTLATGAGFSGTR 100 (115)
Q Consensus 83 t~~e~~~ll~~aGf~~~~ 100 (115)
+..++++|.++.|+++-.
T Consensus 14 ~~~aIR~WAr~nG~~Vsd 31 (55)
T 2kng_A 14 QSAAIREWARRNGHNVST 31 (55)
T ss_dssp HHHHHHHHHHHTTCCCCS
T ss_pred ChHHHHHHHHHcCCcCCC
Confidence 467999999999998753
No 362
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.77 E-value=1.1e+02 Score=16.10 Aligned_cols=30 Identities=13% Similarity=0.055 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHhCCCCeeEEEEcCCceEEEEE
Q 048196 82 RTKHEFLTLATGAGFSGTRFEWFTCNLWVRDF 113 (115)
Q Consensus 82 rt~~e~~~ll~~aGf~~~~~~~~~~~~~lie~ 113 (115)
-|.+++.++|...| .+..+.-. ..++.|+.
T Consensus 21 ~t~~~l~~~F~~~G-~v~~~~~~-~~~afV~f 50 (90)
T 2dnp_A 21 CTSQELRSLFERRG-RVIECDVV-KDYAFVHM 50 (90)
T ss_dssp CCHHHHHHHHHHHS-CEEEEEEC-SSCEEEEE
T ss_pred CCHHHHHHHHHcCC-CEEEEEEE-CCEEEEEE
Confidence 57899999999988 55454433 33555554
No 363
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=20.72 E-value=2.2e+02 Score=19.70 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=42.5
Q ss_pred EeccccccCChHHHHHHHHHHHhhCCCCCEEEEEeeecCCCCCCchhhhhchhccchhcccCCCceeCCHHHHHHHHHhC
Q 048196 15 FMKWILHNWSDDHCLKLLKIYYKSIPEDGKVIVVESILPELPETSTVSKRNSQLDVLMMTQNPSGKKRTKHEFLTLATGA 94 (115)
Q Consensus 15 ~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~lii~d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~rt~~e~~~ll~~a 94 (115)
++-.+=..|+.+++.++++. |.+-|..+|=|++.+++. ....++....++-.. .+...++..+++++++.-
T Consensus 186 l~vDan~~~~~~~a~~~~~~----L~~~~i~~iEqP~~~~d~--~~~~~l~~~~~iPIa---~dE~~~~~~~~~~~l~~~ 256 (354)
T 3jva_A 186 LRLDANQAWTPKDAVKAIQA----LADYQIELVEQPVKRRDL--EGLKYVTSQVNTTIM---ADESCFDAQDALELVKKG 256 (354)
T ss_dssp EEEECTTCSCHHHHHHHHHH----TTTSCEEEEECCSCTTCH--HHHHHHHHHCSSEEE---ESTTCCSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHH----HHhcCCCEEECCCChhhH--HHHHHHHHhCCCCEE---EcCCcCCHHHHHHHHHcC
Confidence 33344456777777666654 555565555444433221 111111222222222 255678889999999876
Q ss_pred CCCeeEEE
Q 048196 95 GFSGTRFE 102 (115)
Q Consensus 95 Gf~~~~~~ 102 (115)
....+.++
T Consensus 257 ~~d~v~~k 264 (354)
T 3jva_A 257 TVDVINIK 264 (354)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 66666554
No 364
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=20.52 E-value=69 Score=22.01 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=17.0
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 048196 30 KLLKIYYKSIPEDGKVIVVES 50 (115)
Q Consensus 30 ~iL~~~~~aL~pgg~lii~d~ 50 (115)
..++.+.+.|++||+++++-.
T Consensus 264 ~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 264 SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEEEcc
Confidence 457778889999999998654
No 365
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=20.04 E-value=32 Score=25.76 Aligned_cols=19 Identities=5% Similarity=0.153 Sum_probs=16.8
Q ss_pred HHHHHHHhhCCCCCEEEEE
Q 048196 30 KLLKIYYKSIPEDGKVIVV 48 (115)
Q Consensus 30 ~iL~~~~~aL~pgg~lii~ 48 (115)
..++++.+.|+|||++.++
T Consensus 376 ~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 376 AWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp HHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHhccCceEEEE
Confidence 5889999999999998874
Done!