Query 048197
Match_columns 480
No_of_seqs 304 out of 1726
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 12:30:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fz3_A Prunin; TREE NUT allerg 100.0 4E-114 1E-118 916.3 37.0 440 39-478 6-526 (531)
2 3qac_A 11S globulin SEED stora 100.0 2E-113 5E-118 906.3 38.7 432 39-479 8-456 (465)
3 3ksc_A LEGA class, prolegumin; 100.0 3E-112 1E-116 902.4 41.8 432 39-479 4-491 (496)
4 3kgl_A Cruciferin; 11S SEED gl 100.0 3E-110 1E-114 881.6 39.2 413 41-476 3-453 (466)
5 2e9q_A 11S globulin subunit be 100.0 1E-105 5E-110 848.5 37.6 437 36-479 18-455 (459)
6 3c3v_A Arachin ARAH3 isoform; 100.0 7E-103 2E-107 833.9 39.7 441 38-478 5-504 (510)
7 1fxz_A Glycinin G1; proglycini 100.0 6E-102 2E-106 824.8 40.8 437 39-478 6-470 (476)
8 2d5f_A Glycinin A3B4 subunit; 100.0 3E-100 1E-104 814.0 36.9 433 40-475 4-493 (493)
9 2cav_A Protein (canavalin); vi 100.0 3.6E-78 1.2E-82 637.9 35.3 349 57-478 58-424 (445)
10 2ea7_A 7S globulin-1; beta bar 100.0 7E-75 2.4E-79 611.4 36.4 349 57-477 33-410 (434)
11 3s7i_A Allergen ARA H 1, clone 100.0 2.2E-75 7.4E-80 611.5 31.7 349 57-475 16-417 (418)
12 1uij_A Beta subunit of beta co 100.0 8.6E-75 3E-79 608.2 33.4 353 53-478 17-395 (416)
13 2phl_A Phaseolin; plant SEED s 100.0 9.2E-71 3.1E-75 573.1 31.4 334 57-478 24-383 (397)
14 2vqa_A SLL1358 protein, MNCA; 100.0 9.8E-44 3.3E-48 364.4 34.7 334 49-477 24-360 (361)
15 1j58_A YVRK protein; cupin, de 100.0 4E-35 1.4E-39 303.4 28.0 322 49-467 51-375 (385)
16 1dgw_A Canavalin; duplicated s 100.0 2.1E-33 7.3E-38 262.4 18.4 167 49-271 7-178 (178)
17 3s7i_A Allergen ARA H 1, clone 100.0 9.6E-30 3.3E-34 266.3 16.0 180 49-270 231-417 (418)
18 1dgw_A Canavalin; duplicated s 99.9 3.3E-27 1.1E-31 220.4 14.3 150 319-473 11-175 (178)
19 3kgl_A Cruciferin; 11S SEED gl 99.9 1.1E-25 3.6E-30 237.7 18.3 168 42-270 280-452 (466)
20 3ksc_A LEGA class, prolegumin; 99.9 4.8E-25 1.7E-29 234.3 19.2 167 42-269 315-486 (496)
21 1uij_A Beta subunit of beta co 99.9 1.3E-24 4.5E-29 227.8 18.9 173 43-269 213-391 (416)
22 2e9q_A 11S globulin subunit be 99.9 3.6E-24 1.2E-28 226.6 16.6 165 43-268 280-449 (459)
23 3qac_A 11S globulin SEED stora 99.9 4.7E-24 1.6E-28 225.1 16.5 165 43-268 281-450 (465)
24 2phl_A Phaseolin; plant SEED s 99.9 3.2E-24 1.1E-28 223.2 14.4 154 320-476 23-196 (397)
25 3fz3_A Prunin; TREE NUT allerg 99.9 1.7E-23 6E-28 222.4 16.7 166 42-268 351-521 (531)
26 2ea7_A 7S globulin-1; beta bar 99.9 2.5E-23 8.5E-28 219.1 17.7 173 44-269 231-407 (434)
27 2cav_A Protein (canavalin); vi 99.9 5E-23 1.7E-27 217.4 18.3 171 44-268 246-419 (445)
28 1fi2_A Oxalate oxidase, germin 99.9 9.8E-23 3.3E-27 193.4 17.3 144 322-467 48-197 (201)
29 2d5f_A Glycinin A3B4 subunit; 99.9 4.3E-23 1.5E-27 220.1 15.0 148 322-473 22-238 (493)
30 3c3v_A Arachin ARAH3 isoform; 99.9 3.1E-22 1.1E-26 213.5 19.0 165 43-268 330-499 (510)
31 1fxz_A Glycinin G1; proglycini 99.9 6.2E-22 2.1E-26 210.4 20.1 164 44-268 297-465 (476)
32 1dgw_Y Canavalin; duplicated s 99.8 3.2E-21 1.1E-25 161.4 10.8 86 389-475 4-91 (93)
33 2d40_A Z3393, putative gentisa 99.8 5.7E-21 2E-25 196.4 14.9 239 79-424 98-338 (354)
34 1dgw_X Canavalin; duplicated s 99.8 1.8E-21 6.2E-26 158.6 6.9 71 318-388 8-78 (79)
35 2vqa_A SLL1358 protein, MNCA; 99.8 1.6E-20 5.4E-25 192.1 15.2 145 323-473 31-177 (361)
36 1fi2_A Oxalate oxidase, germin 99.8 1.3E-18 4.6E-23 164.8 16.1 139 61-260 51-196 (201)
37 1y3t_A Hypothetical protein YX 99.7 1E-16 3.6E-21 161.4 20.3 249 79-429 44-295 (337)
38 1j58_A YVRK protein; cupin, de 99.7 1.8E-17 6.3E-22 171.0 11.0 139 324-466 59-197 (385)
39 3bu7_A Gentisate 1,2-dioxygena 99.6 6.3E-15 2.1E-19 153.1 21.2 243 78-425 120-368 (394)
40 1rc6_A Hypothetical protein YL 99.6 4.6E-14 1.6E-18 138.5 21.4 195 78-426 56-255 (261)
41 1juh_A Quercetin 2,3-dioxygena 99.6 5.5E-14 1.9E-18 144.0 19.2 258 80-426 47-326 (350)
42 3nw4_A Gentisate 1,2-dioxygena 99.6 1.6E-13 5.4E-18 141.2 20.0 258 66-424 86-349 (368)
43 1sef_A Conserved hypothetical 99.5 5.2E-13 1.8E-17 132.1 21.7 194 78-425 59-257 (274)
44 3h7j_A Bacilysin biosynthesis 99.5 1.3E-12 4.3E-17 127.0 22.8 185 80-426 33-220 (243)
45 3rns_A Cupin 2 conserved barre 99.5 5.5E-12 1.9E-16 121.3 23.1 72 345-423 152-223 (227)
46 1sq4_A GLXB, glyoxylate-induce 99.5 3E-12 1E-16 127.2 19.4 199 78-426 65-266 (278)
47 1dgw_Y Canavalin; duplicated s 99.4 1.2E-12 4.3E-17 109.3 10.4 87 143-269 3-90 (93)
48 1sfn_A Conserved hypothetical 99.4 9.4E-11 3.2E-15 114.2 23.4 76 345-426 164-240 (246)
49 4e2q_A Ureidoglycine aminohydr 99.3 2E-10 6.8E-15 113.4 22.0 193 78-426 67-261 (266)
50 1dgw_X Canavalin; duplicated s 99.2 1.5E-11 5.1E-16 100.0 8.1 71 49-121 5-77 (79)
51 3ibm_A Cupin 2, conserved barr 99.1 5.5E-10 1.9E-14 102.7 12.9 86 78-189 53-139 (167)
52 1lr5_A Auxin binding protein 1 99.1 7.3E-10 2.5E-14 100.6 13.4 115 48-181 10-125 (163)
53 3h8u_A Uncharacterized conserv 99.0 1.1E-09 3.7E-14 94.5 10.7 80 78-182 36-116 (125)
54 3kgz_A Cupin 2 conserved barre 99.0 3.6E-09 1.2E-13 96.3 13.8 95 64-187 30-124 (156)
55 3l2h_A Putative sugar phosphat 99.0 2.9E-09 1E-13 96.3 12.1 79 78-182 43-124 (162)
56 3ht1_A REMF protein; cupin fol 99.0 6E-09 2.1E-13 91.5 12.4 81 79-183 37-117 (145)
57 1v70_A Probable antibiotics sy 98.9 6E-09 2.1E-13 85.6 11.5 78 77-180 24-102 (105)
58 3jzv_A Uncharacterized protein 98.9 5.8E-09 2E-13 96.0 12.4 79 79-183 51-129 (166)
59 2b8m_A Hypothetical protein MJ 98.9 7.2E-09 2.5E-13 88.3 11.3 75 79-179 25-100 (117)
60 2gu9_A Tetracenomycin polyketi 98.9 8.5E-09 2.9E-13 86.3 11.6 79 77-181 17-98 (113)
61 3h8u_A Uncharacterized conserv 98.9 5.4E-09 1.9E-13 90.1 10.0 81 345-430 38-119 (125)
62 3fjs_A Uncharacterized protein 98.9 7.4E-09 2.5E-13 88.8 10.5 78 76-179 31-108 (114)
63 2oa2_A BH2720 protein; 1017534 98.9 1.2E-08 4E-13 91.3 11.6 83 345-427 42-125 (148)
64 2oa2_A BH2720 protein; 1017534 98.9 1.5E-08 5.3E-13 90.5 12.3 83 79-181 41-124 (148)
65 1x82_A Glucose-6-phosphate iso 98.9 2E-08 6.8E-13 94.1 13.4 84 79-183 65-157 (190)
66 2fqp_A Hypothetical protein BP 98.9 3.1E-09 1.1E-13 88.2 6.8 77 78-178 15-92 (97)
67 1o4t_A Putative oxalate decarb 98.9 2.2E-08 7.6E-13 87.9 12.6 76 78-179 54-130 (133)
68 3l2h_A Putative sugar phosphat 98.9 1.6E-08 5.5E-13 91.4 11.8 79 345-429 45-126 (162)
69 4e2g_A Cupin 2 conserved barre 98.8 3.4E-08 1.1E-12 85.0 13.0 77 78-181 38-114 (126)
70 4i4a_A Similar to unknown prot 98.8 2E-08 7E-13 86.6 11.5 75 79-179 32-106 (128)
71 1v70_A Probable antibiotics sy 98.8 1.9E-08 6.4E-13 82.6 10.8 77 344-426 26-103 (105)
72 1vj2_A Novel manganese-contain 98.8 1.5E-08 5.2E-13 88.0 10.3 76 78-179 45-120 (126)
73 1lr5_A Auxin binding protein 1 98.8 8.9E-09 3.1E-13 93.3 8.7 80 345-427 40-126 (163)
74 2bnm_A Epoxidase; oxidoreducta 98.8 3.7E-08 1.3E-12 91.6 13.1 80 78-179 114-197 (198)
75 3i7d_A Sugar phosphate isomera 98.8 3.2E-08 1.1E-12 90.4 11.9 98 58-183 22-123 (163)
76 2f4p_A Hypothetical protein TM 98.8 3E-08 1E-12 88.8 11.6 77 78-180 45-122 (147)
77 3lag_A Uncharacterized protein 98.8 9.8E-09 3.4E-13 86.2 7.6 79 77-178 13-92 (98)
78 2ozi_A Hypothetical protein RP 98.8 1.6E-08 5.6E-13 85.0 8.4 80 76-178 12-92 (98)
79 1sef_A Conserved hypothetical 98.8 6E-08 2.1E-12 95.6 13.8 77 79-181 180-258 (274)
80 1x82_A Glucose-6-phosphate iso 98.8 4.3E-08 1.5E-12 91.8 12.1 82 345-427 66-156 (190)
81 3cew_A Uncharacterized cupin p 98.8 3.9E-08 1.3E-12 84.9 10.7 82 74-181 19-102 (125)
82 2gu9_A Tetracenomycin polyketi 98.8 5.9E-08 2E-12 81.1 11.2 78 344-427 19-99 (113)
83 2d40_A Z3393, putative gentisa 98.7 3.8E-08 1.3E-12 100.9 11.7 90 61-180 248-339 (354)
84 3ibm_A Cupin 2, conserved barr 98.7 1.8E-07 6.1E-12 85.8 14.8 95 326-428 37-133 (167)
85 3kgz_A Cupin 2 conserved barre 98.7 1.2E-07 4.3E-12 86.1 13.2 79 344-429 42-121 (156)
86 1yhf_A Hypothetical protein SP 98.7 5.7E-08 2E-12 82.1 10.3 72 79-176 38-109 (115)
87 2pfw_A Cupin 2, conserved barr 98.7 7.9E-08 2.7E-12 81.3 10.7 73 80-180 33-105 (116)
88 4e2q_A Ureidoglycine aminohydr 98.7 1.4E-07 4.6E-12 93.2 13.6 91 64-183 171-263 (266)
89 1rc6_A Hypothetical protein YL 98.7 9.3E-08 3.2E-12 93.4 12.3 79 79-183 177-257 (261)
90 4e2g_A Cupin 2 conserved barre 98.7 1E-07 3.4E-12 82.0 10.9 75 345-426 40-114 (126)
91 2xlg_A SLL1785 protein, CUCA; 98.7 3.1E-08 1.1E-12 96.3 8.6 82 343-424 40-137 (239)
92 3i7d_A Sugar phosphate isomera 98.7 1.1E-07 3.6E-12 86.8 11.1 99 321-428 21-123 (163)
93 2xlg_A SLL1785 protein, CUCA; 98.7 4.3E-08 1.5E-12 95.3 8.7 108 58-179 22-137 (239)
94 2o8q_A Hypothetical protein; c 98.7 1E-07 3.5E-12 83.1 10.1 76 81-182 43-119 (134)
95 3es1_A Cupin 2, conserved barr 98.7 5.8E-08 2E-12 89.9 9.0 80 79-184 77-156 (172)
96 1y9q_A Transcriptional regulat 98.7 1E-07 3.5E-12 88.4 10.6 76 78-180 101-178 (192)
97 1sfn_A Conserved hypothetical 98.7 2.8E-07 9.4E-12 89.6 14.1 80 78-183 162-242 (246)
98 1sq4_A GLXB, glyoxylate-induce 98.6 7.6E-08 2.6E-12 95.4 9.8 80 79-184 189-269 (278)
99 3lwc_A Uncharacterized protein 98.6 1.1E-07 3.9E-12 82.5 9.4 73 345-425 39-111 (119)
100 2f4p_A Hypothetical protein TM 98.6 2.6E-07 8.7E-12 82.7 11.9 96 344-451 46-142 (147)
101 2pfw_A Cupin 2, conserved barr 98.6 1.9E-07 6.6E-12 78.9 10.5 75 345-427 33-107 (116)
102 2o8q_A Hypothetical protein; c 98.6 1.4E-07 4.9E-12 82.2 9.7 81 347-433 44-125 (134)
103 2b8m_A Hypothetical protein MJ 98.6 2E-07 6.7E-12 79.3 10.4 75 345-425 26-101 (117)
104 3jzv_A Uncharacterized protein 98.6 2.6E-07 8.9E-12 84.9 11.8 77 344-427 51-128 (166)
105 3lwc_A Uncharacterized protein 98.6 1.8E-07 6.1E-12 81.2 10.1 75 78-180 37-111 (119)
106 4i4a_A Similar to unknown prot 98.6 2.2E-07 7.6E-12 80.0 10.4 74 344-424 32-106 (128)
107 3lag_A Uncharacterized protein 98.6 4.6E-08 1.6E-12 82.1 5.6 77 344-423 15-92 (98)
108 2fqp_A Hypothetical protein BP 98.6 8.7E-08 3E-12 79.4 7.2 76 345-424 17-93 (97)
109 3bu7_A Gentisate 1,2-dioxygena 98.6 3.3E-07 1.1E-11 95.1 12.7 90 66-181 279-369 (394)
110 2opk_A Hypothetical protein; p 98.6 2.8E-07 9.5E-12 78.8 10.0 77 76-179 26-108 (112)
111 2q30_A Uncharacterized protein 98.6 2.3E-07 7.9E-12 77.3 9.3 71 78-173 30-102 (110)
112 3cew_A Uncharacterized cupin p 98.6 2.6E-07 9E-12 79.6 9.8 80 343-428 23-104 (125)
113 3ht1_A REMF protein; cupin fol 98.6 2.6E-07 9E-12 80.9 9.9 80 345-429 38-118 (145)
114 1o4t_A Putative oxalate decarb 98.5 3.1E-07 1.1E-11 80.5 10.1 74 345-424 56-130 (133)
115 1vj2_A Novel manganese-contain 98.5 2.5E-07 8.6E-12 80.2 9.3 76 344-426 46-122 (126)
116 3myx_A Uncharacterized protein 98.5 2.8E-05 9.5E-10 75.4 24.2 88 49-175 26-113 (238)
117 3h7j_A Bacilysin biosynthesis 98.5 2.7E-07 9.2E-12 89.3 9.8 75 81-181 145-220 (243)
118 2ozj_A Cupin 2, conserved barr 98.5 3.7E-07 1.3E-11 77.2 9.5 71 80-178 37-107 (114)
119 1yhf_A Hypothetical protein SP 98.5 5.8E-07 2E-11 75.8 10.5 73 345-425 39-111 (115)
120 2bnm_A Epoxidase; oxidoreducta 98.5 1.1E-06 3.8E-11 81.5 13.0 79 343-424 114-197 (198)
121 3fjs_A Uncharacterized protein 98.5 9.1E-07 3.1E-11 75.6 10.4 70 344-421 34-103 (114)
122 1y3t_A Hypothetical protein YX 98.5 5.3E-07 1.8E-11 90.3 10.4 78 345-428 45-122 (337)
123 2vpv_A Protein MIF2, MIF2P; nu 98.5 5.6E-07 1.9E-11 82.8 9.5 73 80-178 87-161 (166)
124 3rns_A Cupin 2 conserved barre 98.4 7.2E-07 2.5E-11 85.5 9.9 75 77-177 149-224 (227)
125 2q30_A Uncharacterized protein 98.4 1.1E-06 3.7E-11 73.1 9.2 75 345-425 32-107 (110)
126 4h7l_A Uncharacterized protein 98.4 1.8E-06 6.2E-11 78.6 11.0 92 321-427 26-119 (157)
127 2pyt_A Ethanolamine utilizatio 98.3 1.9E-06 6.5E-11 76.2 9.3 71 345-425 56-126 (133)
128 2pyt_A Ethanolamine utilizatio 98.3 1.9E-06 6.5E-11 76.2 9.0 72 80-181 56-127 (133)
129 2ozj_A Cupin 2, conserved barr 98.3 3.1E-06 1.1E-10 71.5 10.0 72 345-424 37-108 (114)
130 2ozi_A Hypothetical protein RP 98.3 8.1E-07 2.8E-11 74.6 6.1 77 345-424 16-93 (98)
131 4b29_A Dimethylsulfoniopropion 98.3 4.4E-06 1.5E-10 79.7 11.9 92 61-179 113-204 (217)
132 4axo_A EUTQ, ethanolamine util 98.3 9.7E-06 3.3E-10 73.4 13.4 73 80-182 65-137 (151)
133 2i45_A Hypothetical protein; n 98.3 8E-07 2.7E-11 74.4 5.8 67 83-177 30-97 (107)
134 2i45_A Hypothetical protein; n 98.3 1.7E-06 5.8E-11 72.4 7.7 71 348-425 30-100 (107)
135 3d82_A Cupin 2, conserved barr 98.3 2.4E-06 8.3E-11 70.0 8.3 54 92-171 40-94 (102)
136 3d82_A Cupin 2, conserved barr 98.3 2.8E-06 9.6E-11 69.6 8.5 61 357-424 40-100 (102)
137 1y9q_A Transcriptional regulat 98.3 3.2E-06 1.1E-10 78.2 9.9 77 343-426 101-179 (192)
138 2vpv_A Protein MIF2, MIF2P; nu 98.2 6.6E-06 2.3E-10 75.7 10.4 73 345-423 87-161 (166)
139 1vr3_A Acireductone dioxygenas 98.2 7.2E-06 2.5E-10 77.0 10.7 78 82-180 75-162 (191)
140 1juh_A Quercetin 2,3-dioxygena 98.2 6.9E-06 2.4E-10 83.9 11.1 81 345-429 47-132 (350)
141 4axo_A EUTQ, ethanolamine util 98.2 6.4E-06 2.2E-10 74.6 9.5 73 345-427 65-137 (151)
142 1vr3_A Acireductone dioxygenas 98.2 1.2E-05 4E-10 75.6 11.2 68 358-427 96-164 (191)
143 4h7l_A Uncharacterized protein 98.1 1.5E-05 5E-10 72.6 11.4 98 47-182 19-119 (157)
144 1zrr_A E-2/E-2' protein; nicke 98.1 1.4E-06 4.9E-11 81.0 4.0 65 94-180 93-157 (179)
145 1o5u_A Novel thermotoga mariti 98.1 7.8E-06 2.7E-10 68.9 7.4 68 81-175 31-98 (101)
146 3es1_A Cupin 2, conserved barr 98.0 1E-05 3.4E-10 74.9 7.9 80 344-430 77-157 (172)
147 3nw4_A Gentisate 1,2-dioxygena 98.0 2.5E-05 8.4E-10 80.4 11.5 85 66-180 264-350 (368)
148 3bcw_A Uncharacterized protein 98.0 1.2E-05 4.1E-10 70.2 7.0 70 79-174 47-116 (123)
149 2opk_A Hypothetical protein; p 97.9 5E-05 1.7E-09 64.6 10.2 75 345-425 30-109 (112)
150 3o14_A Anti-ecfsigma factor, C 97.9 0.00082 2.8E-08 64.4 19.4 66 347-425 147-212 (223)
151 3st7_A Capsular polysaccharide 97.9 4.3E-05 1.5E-09 77.1 9.9 78 347-426 273-355 (369)
152 1zrr_A E-2/E-2' protein; nicke 97.9 9.7E-06 3.3E-10 75.4 4.7 68 357-427 91-159 (179)
153 4b29_A Dimethylsulfoniopropion 97.8 8.3E-05 2.8E-09 70.9 10.5 93 323-423 111-203 (217)
154 3st7_A Capsular polysaccharide 97.8 0.00011 3.6E-09 74.1 12.0 77 83-181 274-355 (369)
155 3ebr_A Uncharacterized RMLC-li 97.7 8.2E-05 2.8E-09 67.8 8.8 73 80-180 41-115 (159)
156 2o1q_A Putative acetyl/propion 97.7 3.9E-05 1.3E-09 68.6 5.7 76 346-426 44-119 (145)
157 3bcw_A Uncharacterized protein 97.7 8.9E-05 3E-09 64.6 7.8 63 345-414 48-110 (123)
158 2q1z_B Anti-sigma factor CHRR, 97.6 0.00013 4.5E-09 68.4 8.7 71 80-180 124-194 (195)
159 1o5u_A Novel thermotoga mariti 97.6 0.00012 4.1E-09 61.5 7.4 61 346-414 31-91 (101)
160 3cjx_A Protein of unknown func 97.6 0.0002 6.8E-09 65.7 9.0 74 80-180 42-117 (165)
161 2arc_A ARAC, arabinose operon 97.6 0.00022 7.4E-09 62.9 8.8 58 95-178 32-90 (164)
162 1yfu_A 3-hydroxyanthranilate-3 97.5 0.0002 6.9E-09 65.9 8.2 59 89-169 43-101 (174)
163 3d0j_A Uncharacterized protein 97.5 0.0003 1E-08 62.5 8.9 73 353-426 36-110 (140)
164 2o1q_A Putative acetyl/propion 97.5 0.0002 6.9E-09 63.9 7.5 75 80-180 43-118 (145)
165 2y0o_A Probable D-lyxose ketol 97.5 0.00047 1.6E-08 63.8 9.7 79 346-426 53-154 (175)
166 3ebr_A Uncharacterized RMLC-li 97.5 0.0006 2.1E-08 62.0 10.4 73 345-426 41-116 (159)
167 1zvf_A 3-hydroxyanthranilate 3 97.4 0.00053 1.8E-08 63.1 8.8 63 90-171 43-106 (176)
168 2q1z_B Anti-sigma factor CHRR, 97.3 0.0004 1.4E-08 65.1 7.7 69 345-424 124-193 (195)
169 1yfu_A 3-hydroxyanthranilate-3 97.3 0.00089 3.1E-08 61.6 8.8 59 354-415 43-101 (174)
170 2y0o_A Probable D-lyxose ketol 97.1 0.0032 1.1E-07 58.2 11.4 97 80-184 52-156 (175)
171 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.1 0.008 2.7E-07 53.6 13.5 100 324-427 14-115 (141)
172 1yud_A Hypothetical protein SO 97.0 0.013 4.6E-07 53.7 14.3 99 61-180 27-134 (170)
173 1zvf_A 3-hydroxyanthranilate 3 97.0 0.0023 7.9E-08 58.8 9.1 52 364-416 51-105 (176)
174 3ejk_A DTDP sugar isomerase; Y 97.0 0.0068 2.3E-07 55.9 12.0 74 353-426 60-142 (174)
175 2arc_A ARAC, arabinose operon 97.0 0.003 1E-07 55.5 9.2 57 360-423 32-90 (164)
176 3cjx_A Protein of unknown func 97.0 0.002 6.9E-08 58.9 8.2 73 345-425 42-117 (165)
177 1yud_A Hypothetical protein SO 96.9 0.022 7.5E-07 52.3 14.1 129 325-464 27-165 (170)
178 3es4_A Uncharacterized protein 96.8 0.0057 1.9E-07 52.8 9.2 59 84-168 45-103 (116)
179 2qnk_A 3-hydroxyanthranilate 3 96.8 0.0033 1.1E-07 61.9 8.3 53 359-414 44-96 (286)
180 3myx_A Uncharacterized protein 96.7 0.0073 2.5E-07 58.4 10.4 72 345-425 46-117 (238)
181 3es4_A Uncharacterized protein 96.6 0.0026 8.8E-08 55.0 5.6 68 347-423 43-111 (116)
182 3eqe_A Putative cystein deoxyg 96.6 0.018 6.3E-07 52.8 11.6 83 345-427 68-154 (171)
183 2qnk_A 3-hydroxyanthranilate 3 96.5 0.0052 1.8E-07 60.5 7.9 54 97-172 47-100 (286)
184 3eqe_A Putative cystein deoxyg 96.4 0.023 7.7E-07 52.2 11.2 84 80-182 68-154 (171)
185 3o14_A Anti-ecfsigma factor, C 96.4 0.0062 2.1E-07 58.3 7.5 67 345-423 42-108 (223)
186 3bal_A Acetylacetone-cleaving 96.4 0.0074 2.5E-07 54.6 7.5 76 345-425 45-120 (153)
187 3d0j_A Uncharacterized protein 96.4 0.0071 2.4E-07 53.7 7.1 70 90-177 38-108 (140)
188 2gm6_A Cysteine dioxygenase ty 96.4 0.026 9E-07 53.3 11.6 80 345-425 78-166 (208)
189 3bal_A Acetylacetone-cleaving 96.2 0.0078 2.7E-07 54.4 6.8 64 79-166 44-107 (153)
190 2gm6_A Cysteine dioxygenase ty 96.2 0.033 1.1E-06 52.7 11.0 82 80-179 78-165 (208)
191 3gbg_A TCP pilus virulence reg 96.0 0.012 4E-07 56.8 7.0 63 82-168 8-72 (276)
192 3ejk_A DTDP sugar isomerase; Y 95.8 0.095 3.2E-06 48.2 12.1 119 43-180 16-141 (174)
193 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 95.8 0.043 1.5E-06 51.0 9.7 72 355-426 57-137 (185)
194 1wlt_A 176AA long hypothetical 95.7 0.077 2.6E-06 49.8 11.2 73 354-426 73-155 (196)
195 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 95.6 0.034 1.2E-06 52.2 8.5 71 354-426 68-144 (197)
196 1dzr_A DTDP-4-dehydrorhamnose 95.6 0.055 1.9E-06 50.2 9.7 71 355-425 56-136 (183)
197 3gbg_A TCP pilus virulence reg 95.6 0.025 8.5E-07 54.4 7.7 59 358-421 21-82 (276)
198 2ixk_A DTDP-4-dehydrorhamnose 95.6 0.052 1.8E-06 50.4 9.4 72 355-426 58-138 (184)
199 3ryk_A DTDP-4-dehydrorhamnose 95.5 0.062 2.1E-06 50.7 10.0 73 353-425 77-159 (205)
200 4hn1_A Putative 3-epimerase in 95.4 0.074 2.5E-06 50.0 9.8 72 354-426 52-134 (201)
201 1oi6_A PCZA361.16; epimerase, 95.3 0.081 2.8E-06 50.0 9.9 72 354-425 55-136 (205)
202 4gjz_A Lysine-specific demethy 95.2 0.058 2E-06 50.2 8.6 65 350-415 127-225 (235)
203 1vrb_A Putative asparaginyl hy 95.1 0.071 2.4E-06 54.0 9.4 73 351-424 145-252 (342)
204 2c0z_A NOVW; isomerase, epimer 94.9 0.11 3.7E-06 49.5 9.6 72 354-425 63-144 (216)
205 2xdv_A MYC-induced nuclear ant 94.8 0.095 3.2E-06 55.0 9.6 65 350-415 142-223 (442)
206 3eln_A Cysteine dioxygenase ty 94.6 0.32 1.1E-05 45.5 12.0 81 345-425 69-158 (200)
207 1upi_A DTDP-4-dehydrorhamnose 94.6 0.15 5.1E-06 48.8 9.8 72 354-425 74-155 (225)
208 3d8c_A Hypoxia-inducible facto 94.5 0.09 3.1E-06 53.3 8.5 73 351-424 187-296 (349)
209 1e5r_A Proline oxidase; oxidor 94.2 0.077 2.6E-06 52.7 6.9 86 76-176 86-172 (290)
210 3bb6_A Uncharacterized protein 94.1 0.22 7.5E-06 43.5 8.9 70 355-425 23-100 (127)
211 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 93.8 0.41 1.4E-05 44.8 10.8 112 47-178 18-141 (197)
212 4diq_A Lysine-specific demethy 93.7 0.34 1.2E-05 51.4 11.2 76 349-425 166-263 (489)
213 3eln_A Cysteine dioxygenase ty 93.7 0.54 1.9E-05 44.0 11.5 86 80-180 69-158 (200)
214 4gjz_A Lysine-specific demethy 93.6 0.12 4.2E-06 47.9 6.9 87 84-170 126-226 (235)
215 1vrb_A Putative asparaginyl hy 93.6 0.27 9.2E-06 49.7 9.8 94 86-179 145-252 (342)
216 3al5_A HTYW5, JMJC domain-cont 93.5 0.16 5.5E-06 51.2 8.0 67 351-418 171-267 (338)
217 3loi_A Putative uncharacterize 93.1 2.3 8E-05 38.8 14.3 126 325-464 25-168 (172)
218 2pa7_A DTDP-6-deoxy-3,4-keto-h 92.3 1.6 5.5E-05 38.6 11.8 98 58-179 12-112 (141)
219 1oi6_A PCZA361.16; epimerase, 91.6 1.9 6.6E-05 40.4 12.1 112 47-178 8-134 (205)
220 3k2o_A Bifunctional arginine d 91.5 0.57 2E-05 47.3 8.9 66 355-420 181-285 (336)
221 3ryk_A DTDP-4-dehydrorhamnose 91.2 1.3 4.4E-05 41.7 10.4 112 46-176 31-156 (205)
222 1dzr_A DTDP-4-dehydrorhamnose 91.0 2.5 8.6E-05 38.9 12.1 112 47-178 9-134 (183)
223 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 90.9 2.4 8.1E-05 39.2 11.8 113 47-179 11-135 (185)
224 1wlt_A 176AA long hypothetical 90.7 1.8 6.3E-05 40.3 11.0 109 50-178 32-152 (196)
225 1xe7_A YML079WP, hypothetical 90.7 6.3 0.00021 36.9 14.6 108 346-465 79-199 (203)
226 2ixk_A DTDP-4-dehydrorhamnose 90.6 2.6 8.9E-05 38.8 11.8 115 47-179 11-136 (184)
227 3uss_A Putative uncharacterize 90.1 2.5 8.7E-05 39.8 11.5 84 80-179 72-159 (211)
228 1upi_A DTDP-4-dehydrorhamnose 90.0 4.1 0.00014 38.8 12.9 114 45-178 26-153 (225)
229 4hn1_A Putative 3-epimerase in 89.8 1.5 5.3E-05 41.0 9.6 111 47-176 6-130 (201)
230 3d8c_A Hypoxia-inducible facto 89.5 1.2 4.2E-05 44.9 9.4 93 86-178 187-295 (349)
231 4diq_A Lysine-specific demethy 89.3 2 6.7E-05 45.5 11.0 87 85-172 167-255 (489)
232 2c0z_A NOVW; isomerase, epimer 89.2 4 0.00014 38.6 12.1 113 46-178 16-142 (216)
233 3al5_A HTYW5, JMJC domain-cont 89.2 0.99 3.4E-05 45.3 8.4 93 84-178 169-271 (338)
234 2xdv_A MYC-induced nuclear ant 89.1 1.2 4.2E-05 46.6 9.3 79 86-169 143-223 (442)
235 3kv4_A PHD finger protein 8; e 88.7 1.1 3.9E-05 46.8 8.7 74 354-427 239-338 (447)
236 2yu1_A JMJC domain-containing 88.6 1.5 5.1E-05 46.0 9.5 74 355-428 205-304 (451)
237 3kv5_D JMJC domain-containing 88.4 1 3.5E-05 47.7 8.2 63 354-416 274-361 (488)
238 3uss_A Putative uncharacterize 88.3 3 0.0001 39.2 10.6 80 345-425 72-160 (211)
239 3k3o_A PHF8, PHD finger protei 88.3 0.93 3.2E-05 46.4 7.5 65 354-418 155-244 (371)
240 3rcq_A Aspartyl/asparaginyl be 87.7 2.5 8.7E-05 39.4 9.5 80 82-185 103-185 (197)
241 3kv4_A PHD finger protein 8; e 87.6 1.3 4.6E-05 46.4 8.4 101 85-187 234-343 (447)
242 2vec_A YHAK, pirin-like protei 87.6 4.7 0.00016 39.0 11.7 71 84-179 67-141 (256)
243 3k2o_A Bifunctional arginine d 87.5 2.4 8.2E-05 42.7 9.9 100 84-183 174-294 (336)
244 1eyb_A Homogentisate 1,2-dioxy 87.3 2.7 9.1E-05 44.1 10.3 50 350-409 347-397 (471)
245 3kv9_A JMJC domain-containing 87.2 0.98 3.4E-05 46.6 7.0 101 85-188 178-288 (397)
246 3m3i_A Putative uncharacterize 87.1 13 0.00044 35.3 14.0 129 325-465 34-211 (225)
247 3kv9_A JMJC domain-containing 87.1 1.3 4.4E-05 45.8 7.7 66 351-416 179-270 (397)
248 2qdr_A Uncharacterized protein 86.8 1.9 6.4E-05 42.0 8.1 70 79-179 89-160 (303)
249 2yu1_A JMJC domain-containing 86.4 1.2 4E-05 46.8 7.1 104 85-188 199-309 (451)
250 3pua_A GRC5, PHD finger protei 86.4 1.2 4.1E-05 45.9 7.1 85 85-171 177-270 (392)
251 3pua_A GRC5, PHD finger protei 86.0 0.97 3.3E-05 46.6 6.1 67 354-420 182-273 (392)
252 3kv5_D JMJC domain-containing 85.9 1.2 4E-05 47.3 6.8 99 85-187 269-378 (488)
253 3k3o_A PHF8, PHD finger protei 85.4 2.6 8.8E-05 43.1 8.9 85 85-170 150-242 (371)
254 1znp_A Hypothetical protein AT 83.7 24 0.00081 31.6 13.9 99 325-427 20-126 (154)
255 1pmi_A PMI, phosphomannose iso 83.3 5.5 0.00019 41.5 10.5 76 64-168 345-423 (440)
256 2p17_A Pirin-like protein; GK1 83.0 6.9 0.00024 38.2 10.6 73 343-424 164-241 (277)
257 2qjv_A Uncharacterized IOLB-li 82.8 3.3 0.00011 40.5 8.0 67 345-413 152-233 (270)
258 3pur_A Lysine-specific demethy 81.2 2.9 0.0001 44.5 7.5 85 86-171 300-392 (528)
259 3pur_A Lysine-specific demethy 80.4 2.5 8.7E-05 45.0 6.7 63 354-416 304-391 (528)
260 2rg4_A Uncharacterized protein 79.9 4.6 0.00016 37.9 7.7 77 349-425 106-205 (216)
261 1qwr_A Mannose-6-phosphate iso 79.0 4.6 0.00016 40.2 7.8 59 78-164 248-306 (319)
262 1tq5_A Protein YHHW; bicupin, 78.7 11 0.00039 35.9 10.2 70 85-179 45-118 (242)
263 2vec_A YHAK, pirin-like protei 78.6 7.2 0.00025 37.7 8.9 69 351-424 69-141 (256)
264 1eyb_A Homogentisate 1,2-dioxy 78.2 7.8 0.00027 40.6 9.4 87 327-423 140-227 (471)
265 1zx5_A Mannosephosphate isomer 77.6 6.6 0.00023 38.8 8.4 59 78-166 227-286 (300)
266 1qwr_A Mannose-6-phosphate iso 76.4 7.5 0.00026 38.7 8.5 60 346-414 251-310 (319)
267 2oyz_A UPF0345 protein VPA0057 75.5 16 0.00056 30.0 8.8 71 345-423 22-92 (94)
268 2oyz_A UPF0345 protein VPA0057 74.8 21 0.00072 29.3 9.3 53 99-177 39-91 (94)
269 1j1l_A Pirin; beta sandwich, c 74.1 31 0.0011 33.8 12.2 80 339-424 162-242 (290)
270 2pqq_A Putative transcriptiona 73.9 5.9 0.0002 32.9 6.1 54 348-402 28-81 (149)
271 2wfp_A Mannose-6-phosphate iso 73.1 7 0.00024 40.1 7.5 58 79-164 322-379 (394)
272 1tq5_A Protein YHHW; bicupin, 72.9 16 0.00056 34.8 9.6 69 350-423 45-117 (242)
273 3dl3_A Tellurite resistance pr 72.8 16 0.00055 31.3 8.4 67 355-426 25-99 (119)
274 2pqq_A Putative transcriptiona 72.3 7.5 0.00026 32.2 6.4 54 83-156 28-81 (149)
275 1pmi_A PMI, phosphomannose iso 71.7 13 0.00043 38.8 9.1 63 346-413 357-422 (440)
276 2fmy_A COOA, carbon monoxide o 71.3 16 0.00055 32.8 8.8 70 83-175 27-96 (220)
277 3dn7_A Cyclic nucleotide bindi 70.6 10 0.00036 33.2 7.2 53 84-156 31-83 (194)
278 2wfp_A Mannose-6-phosphate iso 70.3 8.1 0.00028 39.6 7.2 58 346-412 324-381 (394)
279 2z69_A DNR protein; beta barre 70.1 6.7 0.00023 32.8 5.6 53 83-155 35-87 (154)
280 3kmh_A D-lyxose isomerase; cup 69.3 47 0.0016 31.8 11.6 80 346-425 106-208 (246)
281 2oz6_A Virulence factor regula 68.9 9.6 0.00033 33.7 6.7 116 349-466 14-187 (207)
282 3kmh_A D-lyxose isomerase; cup 68.4 20 0.00068 34.4 8.8 104 80-185 105-212 (246)
283 1ft9_A Carbon monoxide oxidati 68.3 17 0.00059 32.6 8.4 68 83-173 23-90 (222)
284 4ev0_A Transcription regulator 68.3 12 0.0004 33.3 7.2 171 84-279 23-205 (216)
285 3fx3_A Cyclic nucleotide-bindi 68.3 11 0.00039 34.1 7.2 54 84-157 35-88 (237)
286 2oz6_A Virulence factor regula 67.9 12 0.00041 33.0 7.1 55 83-157 13-67 (207)
287 1zx5_A Mannosephosphate isomer 67.8 14 0.00048 36.4 8.1 58 346-414 230-288 (300)
288 3hqx_A UPF0345 protein aciad03 67.4 49 0.0017 27.9 10.1 53 99-177 55-107 (111)
289 4ev0_A Transcription regulator 67.3 11 0.00039 33.4 6.9 116 349-466 23-186 (216)
290 3mdp_A Cyclic nucleotide-bindi 67.3 11 0.00038 30.9 6.3 57 83-156 29-85 (142)
291 3fx3_A Cyclic nucleotide-bindi 67.0 11 0.00038 34.2 6.9 73 350-424 36-113 (237)
292 3e6c_C CPRK, cyclic nucleotide 66.7 13 0.00045 34.2 7.3 162 83-279 32-219 (250)
293 3hqx_A UPF0345 protein aciad03 66.5 46 0.0016 28.1 9.7 69 347-423 38-108 (111)
294 3la7_A Global nitrogen regulat 66.4 15 0.00051 33.8 7.6 62 75-156 35-96 (243)
295 2p17_A Pirin-like protein; GK1 66.3 16 0.00055 35.6 8.1 55 78-160 164-220 (277)
296 3ryp_A Catabolite gene activat 66.3 14 0.00047 32.7 7.1 54 84-157 20-73 (210)
297 3dn7_A Cyclic nucleotide bindi 66.2 8.1 0.00028 33.9 5.5 100 366-466 47-191 (194)
298 3gyd_A CNMP-BD protein, cyclic 65.2 14 0.00049 32.6 7.0 53 83-155 62-114 (187)
299 1o5l_A Transcriptional regulat 65.2 10 0.00035 34.1 6.1 55 82-156 21-75 (213)
300 3ryp_A Catabolite gene activat 64.8 13 0.00044 32.9 6.7 74 349-424 20-99 (210)
301 2xxz_A Lysine-specific demethy 64.7 6.2 0.00021 39.7 4.8 34 147-180 281-314 (332)
302 3b02_A Transcriptional regulat 64.2 13 0.00046 32.7 6.6 46 234-279 136-181 (195)
303 2z69_A DNR protein; beta barre 64.2 6.2 0.00021 33.0 4.2 53 348-401 35-87 (154)
304 3iwz_A CAP-like, catabolite ac 64.0 15 0.00051 33.0 7.0 54 84-157 35-88 (230)
305 2gau_A Transcriptional regulat 63.7 12 0.0004 34.0 6.2 164 83-279 33-222 (232)
306 3d0s_A Transcriptional regulat 63.1 17 0.00058 32.7 7.2 52 85-156 31-82 (227)
307 1zyb_A Transcription regulator 62.5 12 0.0004 34.2 6.1 117 348-466 43-209 (232)
308 3e97_A Transcriptional regulat 62.2 12 0.00041 33.8 6.0 117 348-466 29-198 (231)
309 1o5l_A Transcriptional regulat 62.2 14 0.00046 33.3 6.3 126 346-473 20-194 (213)
310 3mdp_A Cyclic nucleotide-bindi 62.2 5.6 0.00019 32.8 3.4 54 348-402 29-85 (142)
311 3dv8_A Transcriptional regulat 62.0 18 0.00062 32.2 7.2 53 84-156 27-79 (220)
312 1zyb_A Transcription regulator 61.9 14 0.00047 33.7 6.4 54 83-156 43-96 (232)
313 3b02_A Transcriptional regulat 61.7 11 0.00036 33.4 5.4 100 366-466 16-162 (195)
314 3eo6_A Protein of unknown func 61.7 26 0.0009 29.4 7.3 69 346-422 36-104 (106)
315 3la7_A Global nitrogen regulat 61.4 16 0.00056 33.5 6.9 73 350-424 45-124 (243)
316 3dv8_A Transcriptional regulat 61.1 17 0.00058 32.4 6.8 116 349-466 27-192 (220)
317 2zcw_A TTHA1359, transcription 61.1 12 0.00043 33.1 5.8 113 351-466 8-169 (202)
318 3e6c_C CPRK, cyclic nucleotide 60.8 17 0.00059 33.4 6.9 116 348-466 32-200 (250)
319 3m3i_A Putative uncharacterize 60.8 1.1E+02 0.0039 28.8 12.6 58 61-121 34-101 (225)
320 3e97_A Transcriptional regulat 60.7 13 0.00045 33.5 6.0 55 83-157 29-83 (231)
321 3gyd_A CNMP-BD protein, cyclic 60.2 13 0.00045 32.8 5.8 53 348-401 62-114 (187)
322 2zcw_A TTHA1359, transcription 60.0 15 0.00051 32.5 6.2 46 234-279 143-188 (202)
323 3iwz_A CAP-like, catabolite ac 59.9 12 0.00042 33.6 5.6 74 349-424 35-114 (230)
324 2gau_A Transcriptional regulat 59.3 11 0.00038 34.1 5.2 117 348-466 33-203 (232)
325 3d0s_A Transcriptional regulat 58.4 13 0.00046 33.4 5.6 73 350-424 31-108 (227)
326 3kcc_A Catabolite gene activat 58.3 21 0.00072 33.2 7.1 55 83-157 69-123 (260)
327 3idb_B CAMP-dependent protein 58.2 20 0.00069 30.4 6.5 53 83-156 61-113 (161)
328 1xn7_A Hypothetical protein YH 57.4 5.5 0.00019 31.4 2.4 35 237-271 16-50 (78)
329 3eo6_A Protein of unknown func 57.4 32 0.0011 28.9 7.1 45 99-167 52-96 (106)
330 3idb_B CAMP-dependent protein 55.4 15 0.00052 31.1 5.2 50 350-401 63-112 (161)
331 3avr_A Lysine-specific demethy 53.5 11 0.00037 40.3 4.5 32 147-178 340-371 (531)
332 1ft9_A Carbon monoxide oxidati 53.4 32 0.0011 30.8 7.3 113 349-466 24-186 (222)
333 2fmy_A COOA, carbon monoxide o 52.4 19 0.00064 32.3 5.5 113 349-466 28-190 (220)
334 3kcc_A Catabolite gene activat 52.1 18 0.00063 33.7 5.6 75 348-424 69-149 (260)
335 4ask_A Lysine-specific demethy 50.9 8.7 0.0003 40.7 3.2 32 147-178 315-346 (510)
336 2ypd_A Probable JMJC domain-co 50.6 13 0.00043 38.2 4.3 37 147-186 295-331 (392)
337 2qdr_A Uncharacterized protein 50.5 73 0.0025 31.0 9.3 83 326-425 77-161 (303)
338 2bgc_A PRFA; bacterial infecti 50.2 30 0.001 31.5 6.6 55 83-158 18-72 (238)
339 1e5r_A Proline oxidase; oxidor 50.1 23 0.00077 34.9 5.9 72 346-421 91-172 (290)
340 2bgc_A PRFA; bacterial infecti 49.6 20 0.0007 32.7 5.4 75 348-424 18-99 (238)
341 2k02_A Ferrous iron transport 47.8 6.6 0.00023 31.8 1.4 35 237-271 16-50 (87)
342 3dkw_A DNR protein; CRP-FNR, H 47.4 13 0.00044 33.4 3.5 47 233-279 174-220 (227)
343 3rcq_A Aspartyl/asparaginyl be 46.5 1E+02 0.0034 28.5 9.5 70 347-423 103-178 (197)
344 1xru_A 4-deoxy-L-threo-5-hexos 45.8 96 0.0033 30.3 9.6 76 345-424 179-264 (282)
345 1j1l_A Pirin; beta sandwich, c 45.6 90 0.0031 30.4 9.5 38 78-115 166-204 (290)
346 3loi_A Putative uncharacterize 44.4 1.8E+02 0.0062 26.2 12.4 96 61-178 25-134 (172)
347 3dkw_A DNR protein; CRP-FNR, H 42.1 12 0.00041 33.6 2.4 117 348-466 32-201 (227)
348 2qjv_A Uncharacterized IOLB-li 41.3 1.1E+02 0.0038 29.6 9.3 95 61-173 11-105 (270)
349 2qcs_B CAMP-dependent protein 41.2 71 0.0024 29.7 7.8 54 83-155 180-233 (291)
350 3bpz_A Potassium/sodium hyperp 40.2 59 0.002 28.7 6.8 33 83-115 95-127 (202)
351 4ava_A Lysine acetyltransferas 39.4 58 0.002 31.2 7.0 51 84-155 37-87 (333)
352 3bb6_A Uncharacterized protein 38.4 1.7E+02 0.0059 25.1 9.0 64 89-171 22-92 (127)
353 2ptm_A Hyperpolarization-activ 38.2 59 0.002 28.5 6.4 49 83-155 94-142 (198)
354 3pna_A CAMP-dependent protein 37.0 77 0.0026 26.4 6.7 34 83-116 61-94 (154)
355 1wgp_A Probable cyclic nucleot 34.7 23 0.00078 28.9 2.8 31 85-115 31-61 (137)
356 3ocp_A PRKG1 protein; serine/t 33.7 75 0.0026 25.8 6.0 31 84-114 47-77 (139)
357 4f8a_A Potassium voltage-gated 33.4 96 0.0033 25.6 6.7 49 84-157 51-99 (160)
358 2rg4_A Uncharacterized protein 33.3 83 0.0028 29.1 6.8 90 85-177 107-202 (216)
359 3shr_A CGMP-dependent protein 30.3 80 0.0027 29.5 6.3 53 83-155 180-233 (299)
360 2qcs_B CAMP-dependent protein 29.2 1.2E+02 0.0042 27.9 7.4 36 366-401 197-233 (291)
361 1xe7_A YML079WP, hypothetical 28.3 2E+02 0.0068 26.7 8.3 68 81-167 79-151 (203)
362 1wgp_A Probable cyclic nucleot 28.2 17 0.00057 29.8 0.8 35 366-401 46-82 (137)
363 1itw_A Isocitrate dehydrogenas 27.7 41 0.0014 36.2 3.8 38 367-404 422-459 (741)
364 1vp6_A CNBD, cyclic-nucleotide 27.3 78 0.0027 25.5 4.9 32 84-115 35-66 (138)
365 4ava_A Lysine acetyltransferas 27.3 68 0.0023 30.6 5.2 35 366-401 53-87 (333)
366 3shr_A CGMP-dependent protein 27.1 51 0.0017 30.9 4.2 36 366-401 197-233 (299)
367 2b0t_A NADP isocitrate dehydro 27.0 41 0.0014 36.2 3.7 38 367-404 418-455 (738)
368 1o7f_A CAMP-dependent RAP1 gua 25.4 1.2E+02 0.0041 30.4 6.9 57 83-157 65-121 (469)
369 3dl3_A Tellurite resistance pr 25.4 3.1E+02 0.011 23.2 8.4 65 90-173 25-92 (119)
370 2d93_A RAP guanine nucleotide 25.0 76 0.0026 25.6 4.5 33 83-115 39-72 (134)
371 2jt1_A PEFI protein; solution 24.7 32 0.0011 26.9 1.8 36 238-273 25-60 (77)
372 1uhe_A Aspartate 1-decarboxyla 22.8 9.2 0.00031 31.6 -1.7 34 368-404 29-62 (97)
373 3ukn_A Novel protein similar t 22.2 1.4E+02 0.0049 26.2 6.1 50 82-156 97-146 (212)
374 1znp_A Hypothetical protein AT 22.1 4.1E+02 0.014 23.5 11.3 111 61-199 20-137 (154)
375 3dkq_A PKHD-type hydroxylase S 22.0 1E+02 0.0035 29.3 5.2 29 394-422 161-189 (243)
376 3of1_A CAMP-dependent protein 21.8 1.4E+02 0.0049 26.4 6.1 49 83-155 148-196 (246)
377 1pcq_O Groes protein; chaperon 21.7 2.1E+02 0.0071 23.4 6.3 66 354-424 21-87 (97)
378 2ptm_A Hyperpolarization-activ 21.4 91 0.0031 27.2 4.5 50 347-401 93-142 (198)
379 3tnp_B CAMP-dependent protein 21.2 1.7E+02 0.0058 29.4 7.0 52 83-155 168-219 (416)
380 3of1_A CAMP-dependent protein 20.3 1.6E+02 0.0054 26.1 6.0 47 84-155 31-77 (246)
381 1ywk_A 4-deoxy-L-threo-5-hexos 20.3 1.7E+02 0.0058 28.6 6.4 61 345-406 179-245 (289)
No 1
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=100.00 E-value=3.7e-114 Score=916.25 Aligned_cols=440 Identities=48% Similarity=0.834 Sum_probs=373.7
Q ss_pred hcccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc
Q 048197 39 QRFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF 118 (480)
Q Consensus 39 ~~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~ 118 (480)
...+++|+|++|+|++|+++|+||||.||+||+++|+|+|+||+++|++|.|+||++||||+|++++||++|++++|+|+
T Consensus 6 ~~~~~~C~~~~l~a~eP~~~i~se~G~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G~v~ 85 (531)
T 3fz3_A 6 LSPQNQCQLNQLQAREPDNRIQAEAGQIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSNAPQLIYIVQGRGVLGAVF 85 (531)
T ss_dssp -CTTTTTCCCCCCCBCCCEEEEETTEEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECC
T ss_pred ccccccccccccCcCCCchhcccCCceEEEeCCCChhhccCcceEEEEEecCCCEeCCccCCCCeEEEEEECcEEEEEEc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhhhccc----------------------------------------------------------ccccccc
Q 048197 119 PGCPETYQESQQRSS----------------------------------------------------------ESQSRSQ 140 (480)
Q Consensus 119 pg~~etf~~~~~~~~----------------------------------------------------------~~~~~~~ 140 (480)
|||||||+++++++. +++++++
T Consensus 86 Pgcpet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (531)
T 3fz3_A 86 SGCPETFEESQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFR 165 (531)
T ss_dssp TTCCCCEECCCC-------------------------------------------------------------------C
T ss_pred CCCccccccccccccccccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccc
Confidence 999999976552100 0123455
Q ss_pred --cccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCcc--c
Q 048197 141 --DQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSR--Y 216 (480)
Q Consensus 141 --d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~--~ 216 (480)
|+||||++|++||||+||+|++||+||+||++|++|+++||+|.+||||++||.||||||++++++.+++.++++ +
T Consensus 166 ~~d~hqkv~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~ 245 (531)
T 3fz3_A 166 QLDRHQKTRRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGE 245 (531)
T ss_dssp CSCEESCCEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-----------
T ss_pred ccccceeeecccCCcEEEECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999887655442211110 1
Q ss_pred c----CCCCCCCC----CcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhH-
Q 048197 217 Q----GSQGGEGG----DRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQ- 287 (480)
Q Consensus 217 ~----g~~~~~~~----~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~- 287 (480)
+ ++++++++ +++...+|||+||++++||+||||+.++|+||++++|+||.||||+++|++++|+..+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~nifsGFs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv~~~l~~~~P~~~~~~~~~ 325 (531)
T 3fz3_A 246 QGRPGQHQQPFGRPRQQEQQGNGNNVFSGFNTQLLAQALNVNEETARNLQGQNDNRNQIIQVRGNLDFVQPPRGRQEREH 325 (531)
T ss_dssp ---------------------CCSSGGGGSCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEECSSSCCCSCCC--------
T ss_pred ccccccccccccccchhhhcccCCCeeecCCHHHHHHHHCCCHHHHHHHhcccccCceEEEecCCCcccCCchhhhhhhh
Confidence 1 11212221 12224589999999999999999999999999999999999999999999999986443211
Q ss_pred -----HHhhh-----hcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecccc
Q 048197 288 -----EQEQE-----FQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNA 357 (480)
Q Consensus 288 -----~~~~~-----~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pga 357 (480)
+++.+ .+....||||||+|+||+++||++|+++|+|++.+|+++++|+.+||+|++|+||+++++|+|||
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~nGleet~c~~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGg 405 (531)
T 3fz3_A 326 EERQQEQLQQERQQQGEQLMANGLEETFCSLRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNG 405 (531)
T ss_dssp ----------------------CGGGTGGGCCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTC
T ss_pred cccccccccccccccccccCCCCcccccccceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCc
Confidence 11110 11134699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecCCCcceeeccc
Q 048197 358 MMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGR 437 (480)
Q Consensus 358 m~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~~~~~~~LAG~ 437 (480)
|++|||||+|+||+||++|+++|+||+++|+++|+.+|++|||+|||+|++|++++++++++|++|+++++|+.++|||+
T Consensus 406 m~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag~e~l~flaF~ss~np~~~~LaG~ 485 (531)
T 3fz3_A 406 IYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKTEENAFINTLAGR 485 (531)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSTTCCEEESSST
T ss_pred cccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecCCCCEEEEEEecCCCCcceeccch
Confidence 99999999999999999999999999999999999999999999999999999998888999999999899999999999
Q ss_pred cccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCC
Q 048197 438 ASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPR 478 (480)
Q Consensus 438 ~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~ 478 (480)
++||++||.+||+++|+++++++++|++++++++||+|+++
T Consensus 486 ~svf~~lP~eVLa~aF~v~~e~v~kLk~~~~es~i~~pp~~ 526 (531)
T 3fz3_A 486 TSFLRALPDEVLANAYQISREQARQLKYNRQETIALSSSQQ 526 (531)
T ss_dssp TCHHHHSCHHHHHHHHTCCHHHHHHHHHSCCCSSEECC---
T ss_pred hHHHHhCCHHHHHHHhCcCHHHHHHHHhcCCCceEECCCCC
Confidence 99999999999999999999999999999999999977554
No 2
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=100.00 E-value=1.5e-113 Score=906.28 Aligned_cols=432 Identities=50% Similarity=0.874 Sum_probs=361.7
Q ss_pred hcccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc
Q 048197 39 QRFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF 118 (480)
Q Consensus 39 ~~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~ 118 (480)
++++++|+|++|+|++|+++|+||+|.|++||+++++|+|+||+++|++|+|+||++||||+|++|+||++|+|++|+|+
T Consensus 8 ~~~~~~c~~~~l~a~eP~~~i~se~G~~e~~d~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~ 87 (465)
T 3qac_A 8 FQQGNECQIDRLTALEPTNRIQAERGLTEVWDSNEQEFRCAGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMI 87 (465)
T ss_dssp --CCCTTCCSCCCCBCCCEEEEETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEEC
T ss_pred cccccccccccCCCCCCccceeCCCcEEEEECCCChhhcccceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEec
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhhhcc----------------cccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCC
Q 048197 119 PGCPETYQESQQRS----------------SESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 119 pg~~etf~~~~~~~----------------~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
|||++||+++++++ ++++++++|+|||+++|++||||+||+|++||+||+|+++|++|+++|++
T Consensus 88 pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~ 167 (465)
T 3qac_A 88 PGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTA 167 (465)
T ss_dssp TTCCCCC------------------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTT
T ss_pred CCCCceeecchhccccccccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCC
Confidence 99999997765421 22346788999999999999999999999999999999999999999999
Q ss_pred CCCcccc-ccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhcccc
Q 048197 183 NSDNQLD-QFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQ 261 (480)
Q Consensus 183 n~~nqld-~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~ 261 (480)
|..|||| +++++||||||++++++.+++ .|++++++ ++ ..+|||+||++++||+||||+.++++||++++
T Consensus 168 n~~nqld~~~~r~F~LaG~~~~~~~~~~~------~~~~~~~~--~~-~~~ni~sgF~~e~La~Af~v~~~~~~kl~~~q 238 (465)
T 3qac_A 168 NHANQLDKNFPTRFYLAGKPQQEHSGEHQ------FSRESRRG--ER-NTGNIFRGFETRLLAESFGVSEEIAQKLQAEQ 238 (465)
T ss_dssp STTCCSCSSSCCEEESSSCCCCSCC-----------------------CCCCGGGGSCHHHHHHHHTCCHHHHHHHHTTT
T ss_pred CcccccccccceeEEecCCCccccccccc------cccccccc--cc-cccchhhcCCHHHHHHHhCCCHHHHHHhhhcc
Confidence 9999999 999999999998765432211 11111111 11 23899999999999999999999999999999
Q ss_pred ccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcc
Q 048197 262 MQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPIL 341 (480)
Q Consensus 262 ~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L 341 (480)
+++|.||+|+++|++++|+..++++++++++.+....||++|++|+||+++||++|+++|+|++.+|+++++|+.+||+|
T Consensus 239 ~~rG~Ivrv~~~l~~~~p~~~~~~~~~~~~~~~~~~~nglee~~c~~~l~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L 318 (465)
T 3qac_A 239 DDRGNIVRVQEGLHVIKPPSRAWEEREQGSRGSRYLPNGVEETICSARLAVNVDDPSKADVYTPEAGRLTTVNSFNLPIL 318 (465)
T ss_dssp CCSCSEEEC-CCCC----------------------------CTTTSCCEEETTCTTTCSEEETTTEEEEEECTTTSTTH
T ss_pred ccceeEEEecCcccccCCcccchhhhhcccccccccCCCccccccceeccccccccccCCcccCCCceEEEeCHHHCCCc
Confidence 98999999999999999986543222211111112359999999999999999999999999999999999999999999
Q ss_pred cccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEE
Q 048197 342 RYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWI 421 (480)
Q Consensus 342 ~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v 421 (480)
++++||+++++|+||||++|||||||+||+||++|+++|+||+++|+++|+++|++|||||||+||+|++++++++++|+
T Consensus 319 ~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~ag~e~~~~l 398 (465)
T 3qac_A 319 RHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQAFEDGFEWV 398 (465)
T ss_dssp HHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred cccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEEcCCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred EEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCCC
Q 048197 422 SFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRS 479 (480)
Q Consensus 422 ~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~~ 479 (480)
+|+++++|..++|||+++||++||.+||++||+++.+++++|++++++++||+|++++
T Consensus 399 ~f~~s~np~~~~LaG~~sv~~~ip~eVla~aF~v~~e~v~~Lk~~~~e~~i~~~~~~~ 456 (465)
T 3qac_A 399 SFKTSENAMFQSLAGRTSAIRSLPIDVVSNIYQISREEAFGLKFNRPETTLFRSSGQG 456 (465)
T ss_dssp EEESSTTCCEEESSSSSBHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSCSEECCCC--
T ss_pred EEecCCCCcccccccchhhhhhCCHHHHHHHhCCCHHHHHHHHhccCccEEECCcccc
Confidence 9999999999999999999999999999999999999999999999999999886554
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=100.00 E-value=3.1e-112 Score=902.41 Aligned_cols=432 Identities=42% Similarity=0.795 Sum_probs=366.2
Q ss_pred hcccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc
Q 048197 39 QRFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF 118 (480)
Q Consensus 39 ~~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~ 118 (480)
++++++|+|++|+|++|+++|+||||+|++||+++++|+|+||+++|++|+||||++||||+|++|+||++|+|++|+|+
T Consensus 4 ~~~~~~c~~~~L~a~eP~~~~~se~G~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~ 83 (496)
T 3ksc_A 4 QPQQNECQLERLDALEPDNRIESEGGLIETWNPNNKQFRCAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVF 83 (496)
T ss_dssp ---CCTTCCSCCCCBCCSEEEEETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEEC
T ss_pred CccccccccccCCcCCCccccCCCCcEEEeccccchhhccCCceEEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEe
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeec
Q 048197 119 PGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLG 198 (480)
Q Consensus 119 pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~La 198 (480)
|||++||+++++++++++++++|+|||+++|++||||+||+|++||+||+|+++|++|+++|++|..||||+++++||||
T Consensus 84 p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~La 163 (496)
T 3ksc_A 84 PGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLA 163 (496)
T ss_dssp TTCCCC---------------CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESS
T ss_pred CCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEec
Confidence 99999999887766666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhc--cccccceeEEEeccceec
Q 048197 199 GNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQ--RPQMQKGIIVRVEEELRV 276 (480)
Q Consensus 199 G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~--~~~~~rg~Iv~v~~~l~~ 276 (480)
||++++++.+++ +++++++++..+.|||+||++++||+||||+.++|+||+ +++|+||.||||+++|++
T Consensus 164 G~~~~~~~~~~~---------~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v~~~l~~ 234 (496)
T 3ksc_A 164 GNHEQEFLQYQH---------QQGGKQEQENEGNNIFSGFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVKGGLSI 234 (496)
T ss_dssp SSCCCTTGGGCC--------------------CCSGGGGSCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEECSSCCCC
T ss_pred CCCccccccccc---------cccccccccccCCCchhhcCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEecCcccc
Confidence 998765543311 011112333445899999999999999999999999999 788889999999999999
Q ss_pred cCCcccchh---------hHHH-------------------------h--------------h------hhcCCCCCCCc
Q 048197 277 LSPQRGREQ---------EQEQ-------------------------E--------------Q------EFQGSGDNGIE 302 (480)
Q Consensus 277 ~~P~~~~~~---------e~~~-------------------------~--------------~------~~~~~~~nG~e 302 (480)
++|+..+++ ++++ + + +.+++..||+|
T Consensus 235 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nGle 314 (496)
T 3ksc_A 235 ISPPEKQARHQRGSRQEEDEDEEKQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEEEEDKKERGGSQKGKSRRQGDNGLE 314 (496)
T ss_dssp CCCC----------------------------------------------------------------------------
T ss_pred cCCchhhhchhhcccchhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcc
Confidence 999764310 0000 0 0 00112359999
Q ss_pred cceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEE
Q 048197 303 ETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQI 382 (480)
Q Consensus 303 e~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~v 382 (480)
||+|+|||++||++|+++|+|++.+|+++.+|+.+||+|++++||+++++|+||||++|||||||+||+||++|+++|+|
T Consensus 315 e~~c~~~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~ 394 (496)
T 3ksc_A 315 ETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQV 394 (496)
T ss_dssp -CCSSSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEE
T ss_pred ccccchhhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHH
Q 048197 383 VAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQR 462 (480)
Q Consensus 383 v~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~ 462 (480)
|+++|+++|+++|++|||||||+||+|+++|++++++|++|+++++|..++|||+++||++||.+||+++|+++.+++++
T Consensus 395 V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~~e~~~~l~f~~s~np~~~~LaG~~sv~~~~p~eVLa~aF~v~~~~v~~ 474 (496)
T 3ksc_A 395 VNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQ 474 (496)
T ss_dssp ECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEESSTTCCEEESSSTTCTTTTSCHHHHHHHHTCCHHHHHH
T ss_pred EeCCCcEEEEEEecCCeEEEECCCCEEEEEeCCCCEEEEEEECCCCCccccccchhhhhhhCCHHHHHHHHCcCHHHHHH
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEeCCCCCC
Q 048197 463 LKYNRQELTVFTPGPRS 479 (480)
Q Consensus 463 l~~~q~e~~i~~p~~~~ 479 (480)
|++++++.+|++|++++
T Consensus 475 Lk~~q~e~~i~~~~~~~ 491 (496)
T 3ksc_A 475 LKSNNPFKFLVPARESE 491 (496)
T ss_dssp HHHSCCCSSEECCCC--
T ss_pred HHhcCCccEEeCCCCcc
Confidence 99999999999776654
No 4
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=2.9e-110 Score=881.60 Aligned_cols=413 Identities=43% Similarity=0.786 Sum_probs=371.4
Q ss_pred ccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCC
Q 048197 41 FQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPG 120 (480)
Q Consensus 41 ~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg 120 (480)
++++|+|++|+|+||+++|+||+|.+++||+++++|+|+||+++|++|+|+||++||||+|++++||++|+|++|+|+||
T Consensus 3 ~~~~c~~~~l~a~ep~~~~~se~G~~e~w~~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pg 82 (466)
T 3kgl_A 3 FPNECQLDQLNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPG 82 (466)
T ss_dssp TTSTTCCSCCCCBCCSEEEEETTEEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTT
T ss_pred cccccccccCCCCCCcceeeCCCcEEEEECCCChhhccCCeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cccchhhhhhcc--------------------------c-------cc-----ccccccccceeEeecCCcEEEeCCCCE
Q 048197 121 CPETYQESQQRS--------------------------S-------ES-----QSRSQDQHQKVRQIREGDLVALPTGSA 162 (480)
Q Consensus 121 ~~etf~~~~~~~--------------------------~-------~~-----~~~~~d~~qk~~~l~~GDV~~iPaG~~ 162 (480)
|||||+++++++ + ++ +++++|+||||++|++||||+||||++
T Consensus 83 c~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~ 162 (466)
T 3kgl_A 83 CAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVA 162 (466)
T ss_dssp CCCCEEECCSSCCCC-----------------------------------------CCEEESCEEEEETTEEEEECTTCE
T ss_pred CcchhhccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCc
Confidence 999997653211 0 01 245789999999999999999999999
Q ss_pred EEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHH
Q 048197 163 NWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERL 242 (480)
Q Consensus 163 h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~ 242 (480)
||+||+|+++|++|+++|++|..||||+++++||||||++++++.+ + ++++..+.|||+||++++
T Consensus 163 ~~~~N~g~e~L~~l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~----------~-----~~~~~~~~ni~sGF~~e~ 227 (466)
T 3kgl_A 163 QWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWI----------E-----GREQQPQKNILNGFTPEV 227 (466)
T ss_dssp EEEECCSSSCEEEEEEEESSSTTCCSCSSCCEEESSCCBTTCCTTS----------T-----TCTTCCBCCGGGGSCHHH
T ss_pred EEEEeCCCCcEEEEEEEcCCCcccccCCceeeeEecCCCccccccc----------c-----ccccccCCCccccCCHHH
Confidence 9999999999999999999999999999999999999976543211 0 112334589999999999
Q ss_pred HHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCCCCCCCc
Q 048197 243 LAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADA 322 (480)
Q Consensus 243 La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~ 322 (480)
||+||||+.++++||+++++++|.||+|+++|++++|+..+++++ ...||+||++|+||+++||++|+++|+
T Consensus 228 La~Af~v~~e~~~kL~~~q~~~G~Iv~v~~~l~~~~p~~~~~~~~--------~~~~glee~~c~~r~~~Ni~~p~~~d~ 299 (466)
T 3kgl_A 228 LAKAFKIDVRTAQQLQNQQDNRGNIIRVQGPFSVIRPPLRSQRPQ--------EEVNGLEETICSARCTDNLDDPSNADV 299 (466)
T ss_dssp HHHHHTSCHHHHHHHTCTTCCSCSEEECCSCCCCCCCCC----------------------CCSSCCCEEETTCGGGEEE
T ss_pred HHHHhCCCHHHHHHHhccccCceeEEEecCcccccCCcccccccc--------cccCCccccccceeccccccCcccCCc
Confidence 999999999999999999998999999999999999976432110 135899999999999999999999999
Q ss_pred ccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEE
Q 048197 323 YNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIV 402 (480)
Q Consensus 323 ~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~v 402 (480)
|++.+|+++.+|+.+||+|++++||+++++|+||||++|||||||+||+||++|+++|+||+++|+++|+++|++|||||
T Consensus 300 ~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v 379 (466)
T 3kgl_A 300 YKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLS 379 (466)
T ss_dssp EETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred ccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCcEEEEEcCCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCC
Q 048197 403 VPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPG 476 (480)
Q Consensus 403 VPqg~~~~~~ag~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~ 476 (480)
||+||+|++++++++++||+|+++++|..++|||+++||++||.+||+++|+++.+++++|++++++.+|++|+
T Consensus 380 ~P~G~~H~~~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~lP~eVla~aF~v~~~~v~~Lk~~q~e~~i~~~~ 453 (466)
T 3kgl_A 380 IPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSS 453 (466)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSSSCCEEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCSSEEECC
T ss_pred ECCCCeEEEEcCCCCEEEEEEECCCCCccccccchhhhhhhCCHHHHHHHhCcCHHHHHHHHhccCccEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999764
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=100.00 E-value=1.4e-105 Score=848.45 Aligned_cols=437 Identities=47% Similarity=0.880 Sum_probs=369.6
Q ss_pred hhhhcccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEE
Q 048197 36 QQQQRFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHG 115 (480)
Q Consensus 36 ~~~~~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g 115 (480)
+++++++++|+|++|+|++|+++|+||+|.|+.|++++++|+|+||+++|++|+|||+++||||+|++|+||++|+|++|
T Consensus 18 ~~~~~~~~~c~~~~l~a~eP~~~v~se~G~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg 97 (459)
T 2e9q_A 18 QHRYQSPRACRLENLRAQDPVRRAEAEAGFTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRG 97 (459)
T ss_dssp --------CCCCSSCCCBCCCEEEEETTEEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEE
T ss_pred hhhhccccccccccCCcCCCCceEecCCcEEEecCCCChhhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEE
Confidence 33356779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceee
Q 048197 116 AVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKF 195 (480)
Q Consensus 116 ~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F 195 (480)
+|+|||++||+++++++++.+++++|+|||+++|++||||+||+|++||+||+|+++|++|+++|++|..||||+++++|
T Consensus 98 ~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F 177 (459)
T 2e9q_A 98 IAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKF 177 (459)
T ss_dssp ECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEE
T ss_pred EEeCCCcchhccchhhccccccccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCccccee
Confidence 99999999998776533322344789999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEecccee
Q 048197 196 YLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELR 275 (480)
Q Consensus 196 ~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~ 275 (480)
||||++.++++.+++ +|++ +++++++..+.|||+|||+++||+||+|+.++++||+++++++|+||+++++|+
T Consensus 178 ~LaG~~~~~~~~~~~------~~~~-~~~~~~~~~~~nif~gf~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~~~~~l~ 250 (459)
T 2e9q_A 178 YLAGRPEQVERGVEE------WERS-SRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIVQVDEDFE 250 (459)
T ss_dssp ESSSCCCCCSSTTCC-------------------CCCCTTTTSCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEECCSSCC
T ss_pred eccCCccccchhhhc------cccc-cccccccccccchhhcCCHHHHHhhcCCCHHHHHhhhhcccCCccEEEeCCccc
Confidence 999997765432211 1111 222233455689999999999999999999999999999998999999999999
Q ss_pred ccCCcccchhhHHHh-hhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeec
Q 048197 276 VLSPQRGREQEQEQE-QEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLY 354 (480)
Q Consensus 276 ~~~P~~~~~~e~~~~-~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~ 354 (480)
+++|+..++++++.. +..+.++.||++|++|+|+++|||++|+++|+|++.+|+++++|+.+||+|++++||+++++|+
T Consensus 251 ~~~P~~~~~e~~~~~~~~~~~~~~~g~~e~~~~~~l~~n~~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~ 330 (459)
T 2e9q_A 251 VLLPEKDEEERSRGRYIESESESENGLEETICTLRLKQNIGRSERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLY 330 (459)
T ss_dssp TTTTC------------------------CGGGSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEC
T ss_pred ccCCccchhhhcccccccccccccCCccccccceeeeecccccccCCcccCCCeeEEEeccccCccccccccceEEEEee
Confidence 999965322111000 0011133589999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecCCCcceee
Q 048197 355 QNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQL 434 (480)
Q Consensus 355 pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~~~~~~~L 434 (480)
||||++|||||+|+||+||++|+++|+||+++|+++|+++|++|||+|||+|++|++.|++++++||+|++++++..++|
T Consensus 331 pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng~~~~~~l~~~~s~~~~~~~l 410 (459)
T 2e9q_A 331 SNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLL 410 (459)
T ss_dssp TTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSSSCCEEES
T ss_pred CCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeCCCCeEEEEEecCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred ccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCCC
Q 048197 435 AGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRS 479 (480)
Q Consensus 435 AG~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~~ 479 (480)
||+++||++||.+||+++|+++++++++|++++++.+||+|++++
T Consensus 411 aG~~s~~~~~p~~Vla~af~v~~~~v~~l~~~~~e~~i~~~~~~~ 455 (459)
T 2e9q_A 411 AGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEMRVLSPGRSQ 455 (459)
T ss_dssp SSSSSHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSCSEECSCC--
T ss_pred cchhHHHHhCCHHHHHHHHCcCHHHHHHHHhcCCccEEeCCCccc
Confidence 999999999999999999999999999999999999999875543
No 6
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=100.00 E-value=7.1e-103 Score=833.88 Aligned_cols=441 Identities=42% Similarity=0.761 Sum_probs=374.4
Q ss_pred hhcccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEE
Q 048197 38 QQRFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAV 117 (480)
Q Consensus 38 ~~~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v 117 (480)
+++.+++|+|++|+|++|+++|+||||+||+||+++++|+|+||+++|++|+||||++||||++++|+||++|+|++|+|
T Consensus 5 ~~~~~~~c~~~~l~a~~p~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v 84 (510)
T 3c3v_A 5 QQPEENACQFQRLNAQRPDNRIESEGGYIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLI 84 (510)
T ss_dssp CCCCTTTTCCSCCCCBCCCEEEEETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEE
T ss_pred ccccccccccccCCCCCchhhhccCCceEEEeCCCCcccccCcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEEEEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccchhhhhhcc--------------cccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 118 FPGCPETYQESQQRS--------------SESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 118 ~pg~~etf~~~~~~~--------------~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
+||||+||+++++.+ +++.++++|.|||+++|++||||+||+|++||+||+|+++|++|+++|++|
T Consensus 85 ~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 85 FPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp CTTCCCCEEEECCC--------------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred eCCCccccccccccccccccccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 999999999876411 012344679999999999999999999999999999999999999999999
Q ss_pred CCccccccceeeeecCCCCcCccccccc----------------cCccc-cCCC----------CCCCCCcccccCcccc
Q 048197 184 SDNQLDQFLRKFYLGGNPQPQLQGYSQS----------------QGSRY-QGSQ----------GGEGGDRSRRGGNLFR 236 (480)
Q Consensus 184 ~~nqld~~~~~F~LaG~~~~~~~~~~~~----------------~~~~~-~g~~----------~~~~~~~~~~~~ni~~ 236 (480)
..||||+++++||||||+.++++.++++ |++++ ++++ .+.+++++..++|||+
T Consensus 165 ~~nqld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s 244 (510)
T 3c3v_A 165 NDNQLDQFPRRFNLAGNHEQEFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS 244 (510)
T ss_dssp TTCCSCSCCCCEESSCCCCCTTGGGCC------------------------------------------------CCTGG
T ss_pred cccccccccceeEecCCcccccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 9999999999999999988765443110 00000 0000 0011233444689999
Q ss_pred cCCHHHHHhhcCCC-HHHHHHhccccc--cceeEEEeccceeccCCccc------chhhHH-Hh-hh-------hcCCCC
Q 048197 237 GFDERLLAEAFNVN-PDLISKLQRPQM--QKGIIVRVEEELRVLSPQRG------REQEQE-QE-QE-------FQGSGD 298 (480)
Q Consensus 237 gf~~~~La~af~v~-~~~~~kl~~~~~--~rg~Iv~v~~~l~~~~P~~~------~~~e~~-~~-~~-------~~~~~~ 298 (480)
|||+++||+||||+ .++++||+++++ ++|.||+|+++|++++|+.. ++++++ +. .. .+.+..
T Consensus 245 gF~~~~La~af~v~~~~~~~~l~~~~~~~~~g~Iv~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (510)
T 3c3v_A 245 GFTPEFLAQAFQVDDRQIVQNLRGENESEEQGAIVTVRGGLRILSPDRKRGADEEEEYDEDEYEYDEEDRRRGRGSRGSG 324 (510)
T ss_dssp GSCHHHHHHHHTCCCHHHHHHHTTTTCCTTSCSEEECTTCCCCCCC----------------------------------
T ss_pred cCCHHHHHHHhCCCHHHHHHHhhccccccccccEEEeCCcccccCCchhccccchhhhhhhhcccccccccccccccccc
Confidence 99999999999999 999999999988 78999999999999998643 111000 00 00 111234
Q ss_pred CCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeE
Q 048197 299 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNG 378 (480)
Q Consensus 299 nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~g 378 (480)
||++|++|+|++++||++|+++|+|++.+|+++.+++.+||+|++++|++++++|.||||+.|||||+|+||+||++|++
T Consensus 325 ng~~e~~c~~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~ 404 (510)
T 3c3v_A 325 NGIEETICTATVKKNIGRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRA 404 (510)
T ss_dssp -CTTTTGGGCCCEEECSSCSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEE
T ss_pred CCccccccceeeeeccCccccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHH
Q 048197 379 RMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRD 458 (480)
Q Consensus 379 rv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e 458 (480)
+++|++++|+++|+.+|++|||+|||+|++|++.|++++++|++|.+++++..++|||+++||++||.+||+++|+++++
T Consensus 405 ~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng~e~l~~l~f~~s~~p~~~~LaG~~svf~~lp~eVla~aF~v~~e 484 (510)
T 3c3v_A 405 HVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQSDNFEYVAFKTDSRPSIANLAGENSVIDNLPEEVVANSYGLPRE 484 (510)
T ss_dssp EEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEESSSSCCEEESSSTTSTTTTSCHHHHHHHHTCCHH
T ss_pred EEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeCCCCEEEEEEECCCCcceeecccHhHHHHhCCHHHHHHHHCcCHH
Confidence 99999999999999999999999999999999988888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCeEEeCCCCC
Q 048197 459 EAQRLKYNRQELTVFTPGPR 478 (480)
Q Consensus 459 ~~~~l~~~q~e~~i~~p~~~ 478 (480)
++++|+.++.+.+||+|+++
T Consensus 485 ~v~~L~~~~~e~~i~~p~~~ 504 (510)
T 3c3v_A 485 QARQLKNNNPFKFFVPPSQQ 504 (510)
T ss_dssp HHHHHHHSCCCSSEECC---
T ss_pred HHHHHHhhCCCcEEECCccc
Confidence 99999999999999988554
No 7
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=100.00 E-value=5.6e-102 Score=824.79 Aligned_cols=437 Identities=43% Similarity=0.775 Sum_probs=358.3
Q ss_pred hcccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc
Q 048197 39 QRFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF 118 (480)
Q Consensus 39 ~~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~ 118 (480)
++++++|+|++|+|++|+++|+||+|.|++||+++++|+|+||+++|++|+|||+++||||++++|+||++|+|++|+|+
T Consensus 6 ~~~~~~c~~~~l~a~~P~~~v~se~G~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~ 85 (476)
T 1fxz_A 6 QPQQNECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIY 85 (476)
T ss_dssp ----CTTCCSCCCCBCCSCEEEETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEEC
T ss_pred cccccccccccCCCCCCceEEecCCceEEeeCCCChhhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhhhcc-cccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeee
Q 048197 119 PGCPETYQESQQRS-SESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL 197 (480)
Q Consensus 119 pg~~etf~~~~~~~-~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~L 197 (480)
|||++||+++++.+ ++++++++|+|||+++|++||||+||+|++||+||+|+++|++|+++|++|..||||+++++|||
T Consensus 86 pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~L 165 (476)
T 1fxz_A 86 PGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYL 165 (476)
T ss_dssp TTCCCC------------------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEES
T ss_pred CCCcchhhccccccccccccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeec
Confidence 99999998875422 22344578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCccccccccCcc--ccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccc--cceeEEEeccc
Q 048197 198 GGNPQPQLQGYSQSQGSR--YQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQM--QKGIIVRVEEE 273 (480)
Q Consensus 198 aG~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~--~rg~Iv~v~~~ 273 (480)
||++.++++++++.++++ ..|+. +++++..++|||+|||+++||+||+|+.++++||+++++ ++|+||+|+++
T Consensus 166 aG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~if~gf~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~v~~~ 242 (476)
T 1fxz_A 166 AGNQEQEFLKYQQEQGGHQSQKGKH---QQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGG 242 (476)
T ss_dssp SSSCCCTTHHHHC----------------------CCCGGGGSCHHHHHHHHTCCHHHHHHHSCC-----CCSEEECSSC
T ss_pred cCCcccccccccccccccccccccc---ccccccccchhhhcCCHHHHHhhhCCCHHHHHhhhccccccccccEEEeCCc
Confidence 999876543321111111 11211 123445568999999999999999999999999999988 78999999999
Q ss_pred eeccCCcccchh------hHH-Hh-hh---------------hcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEE
Q 048197 274 LRVLSPQRGREQ------EQE-QE-QE---------------FQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRV 330 (480)
Q Consensus 274 l~~~~P~~~~~~------e~~-~~-~~---------------~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i 330 (480)
|++++|+..+++ +++ ++ .. ..+++.||++|++|+|++++||++|+++|+|++.+|++
T Consensus 243 l~~~~P~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~e~~~~~~l~~ni~~~~~~~~~~~~gG~v 322 (476)
T 1fxz_A 243 LSVIKPPTDEQQQRPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSV 322 (476)
T ss_dssp CCCCCC------------------------------------------------CTTCCCEEECSSSSCCSEEETTTEEE
T ss_pred ccccCCccchhhhccccchhhhhcccccccccccccccccccccccccCCccccccceeeeccccccccCCcccCCCeEE
Confidence 999999643221 000 00 00 01123599999999999999999999999999999999
Q ss_pred EEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEE
Q 048197 331 TTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVV 410 (480)
Q Consensus 331 ~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~ 410 (480)
+.+++.+||+|++++|++++++|.||||+.|||||+|+||+||++|+++++|++++|+++|+.+|++|||+|||+|++|+
T Consensus 323 ~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~ 402 (476)
T 1fxz_A 323 TTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVA 402 (476)
T ss_dssp EEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred EEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCC
Q 048197 411 KRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPR 478 (480)
Q Consensus 411 ~~ag~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~ 478 (480)
+.|++++++|++|.+++++...+|||+++||++||.+||+++|+++++++++|+.++.+.+||+|+++
T Consensus 403 ~~ng~~~l~~l~f~~s~~p~~~~laG~~s~~~~~p~~Vla~af~~~~~~v~~l~~~~~e~~i~~p~~~ 470 (476)
T 1fxz_A 403 ARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 470 (476)
T ss_dssp EEECSTTEEEEEEESSSSCCEEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCSSEECCCCC
T ss_pred EEeCCCCEEEEEEECCCCCceeEccchhHHHHhCCHHHHHHHhCcCHHHHHHHHhhCCCcEEeCCccc
Confidence 98888899999999999999999999999999999999999999999999999999999999988554
No 8
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=100.00 E-value=3e-100 Score=814.02 Aligned_cols=433 Identities=43% Similarity=0.782 Sum_probs=369.8
Q ss_pred cccCcccccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcC
Q 048197 40 RFQTQCNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFP 119 (480)
Q Consensus 40 ~~~~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~p 119 (480)
.++++|++++|+|++|+++|+||||.||+||+++++|+|+||++++++|+||||++||||++++|+||++|+|++|+|+|
T Consensus 4 ~~~~~c~~~~L~a~~P~~~~~se~G~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~p 83 (493)
T 2d5f_A 4 SKFNECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFP 83 (493)
T ss_dssp ---CTTCCSCCCCBCCCEEEECSSEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCT
T ss_pred ccccCCCcccCCCCCCcceeecCCcEEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhhhccccccc----ccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceee
Q 048197 120 GCPETYQESQQRSSESQS----RSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKF 195 (480)
Q Consensus 120 g~~etf~~~~~~~~~~~~----~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F 195 (480)
|||+||++++++++++++ +++|+|||+++|++||||+||+|++||+||+|+++|++||++|++|..||||+++++|
T Consensus 84 gc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F 163 (493)
T 2d5f_A 84 GCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVF 163 (493)
T ss_dssp TCCCCEEECC-------------CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCE
T ss_pred CCccccccccccccccccccccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCccccccccccee
Confidence 999999988643222221 2579999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCcCccccccccCcc--ccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccc
Q 048197 196 YLGGNPQPQLQGYSQSQGSR--YQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEE 273 (480)
Q Consensus 196 ~LaG~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~ 273 (480)
||||++.++++.++++++++ ..|++.+++++++..++|||+||++++||+||+|+.++|+||+++++++|+||+|+++
T Consensus 164 ~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~v~~~ 243 (493)
T 2d5f_A 164 YLAGNPDIEHPETMQQQQQQKSHGGRKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEGG 243 (493)
T ss_dssp ESSSCCCCSCGGGTC---------------------CCCCGGGGSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEECTTC
T ss_pred eccCCccccchhhhhhcccccccccccccccccccccccchhhcCCHHHHHhHhCCCHHHHHHhhhcccCcccEEEeCCC
Confidence 99999877655443322222 1233333334555667999999999999999999999999999999999999999999
Q ss_pred eeccCCcccchh-hH------------------------------HHh-hhh-----------------cC--CCCCCCc
Q 048197 274 LRVLSPQRGREQ-EQ------------------------------EQE-QEF-----------------QG--SGDNGIE 302 (480)
Q Consensus 274 l~~~~P~~~~~~-e~------------------------------~~~-~~~-----------------~~--~~~nG~e 302 (480)
|+++.|+..+++ +. +++ ... .+ ...||++
T Consensus 244 l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~e 323 (493)
T 2d5f_A 244 LSVISPKWQEQEDEDEDEDEEYEQTPSYPPRRPSHGKHEDDEDEDEEEDQPRPDHPPQRPSRPEQQEPRGRGCQTRNGVE 323 (493)
T ss_dssp CCCCCSCC---------------------------------------------------------------------CTT
T ss_pred ccccCCchhhhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccccccccccccCCcc
Confidence 999888643221 00 000 000 01 1248999
Q ss_pred cceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEE
Q 048197 303 ETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQI 382 (480)
Q Consensus 303 e~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~v 382 (480)
|++|+|++++||++|+.+|+|++.+|+++.+++.+||+|++++|++++++|.||||+.|||||+|+||+||++|+++++|
T Consensus 324 e~~~~~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v 403 (493)
T 2d5f_A 324 ENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRV 403 (493)
T ss_dssp TTGGGCCCEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEE
T ss_pred ccccceeeeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHH
Q 048197 383 VAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQR 462 (480)
Q Consensus 383 v~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~ 462 (480)
++++|+++|+.+|++|||+|||+|++|++.|++++++||+|+++++|..++| ++||++||.+||+++|+++++++++
T Consensus 404 ~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~e~~~~l~~~ts~~p~~~~l---~s~~~~~p~eVla~aF~v~~~~v~~ 480 (493)
T 2d5f_A 404 VNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYI---KDVFRAIPSEVLSNSYNLGQSQVRQ 480 (493)
T ss_dssp ECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSTTCCEEEH---HHHHHHSCHHHHHHHHTCCHHHHHH
T ss_pred EcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCCCCEEEEEEECCCCCcceeH---HHHHHhCCHHHHHHHHCcCHHHHHH
Confidence 9999999998899999999999999999988888999999999999999888 7999999999999999999999999
Q ss_pred HHhcCCCeEEeCC
Q 048197 463 LKYNRQELTVFTP 475 (480)
Q Consensus 463 l~~~q~e~~i~~p 475 (480)
|++++.+++||+|
T Consensus 481 l~~~~~e~~i~~p 493 (493)
T 2d5f_A 481 LKYQGNSGPLVNP 493 (493)
T ss_dssp HHHSSCSSSEECC
T ss_pred HHhcCCCceecCC
Confidence 9999999999987
No 9
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=100.00 E-value=3.6e-78 Score=637.95 Aligned_cols=349 Identities=20% Similarity=0.355 Sum_probs=303.0
Q ss_pred cceecCCceEEE---eCCCChhccccC-eeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcc
Q 048197 57 QRVESEAGVTEF---WDQNDEQLQCAN-VAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRS 132 (480)
Q Consensus 57 ~~~~se~G~~e~---~~~~~~~l~~~g-vs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~ 132 (480)
.++++++|.++. ||.+++.|+|+| +++++++|+|||+.+|||++++||+||++|++++++++|+|.+
T Consensus 58 ~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~--------- 128 (445)
T 2cav_A 58 TLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRD--------- 128 (445)
T ss_dssp EEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEE---------
T ss_pred ceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCE---------
Confidence 478999999999 666678999988 9999999999999999999999999999999999999999864
Q ss_pred cccccccccccceeEeecCCcEEEeCCCCEEEEEcCC-CCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccc
Q 048197 133 SESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDG-PSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQS 211 (480)
Q Consensus 133 ~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G-~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~ 211 (480)
+++|++||||+||+|++||++|+| +++|++|+++|+++..| .++.|||||++.+
T Consensus 129 -------------~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg----~~~~F~laG~~~~-------- 183 (445)
T 2cav_A 129 -------------TYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPG----TVEDFFLSSTKRL-------- 183 (445)
T ss_dssp -------------EEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTT----CCCEEESSCCSSC--------
T ss_pred -------------EEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCC----ceeeeeccCCCch--------
Confidence 579999999999999999999998 89999999999887655 4789999998542
Q ss_pred cCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccc-eeccCCcccchhhHHHh
Q 048197 212 QGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEE-LRVLSPQRGREQEQEQE 290 (480)
Q Consensus 212 ~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~-l~~~~P~~~~~~e~~~~ 290 (480)
.+||++||+++||+||+|+.+++++|+.+++++|+||+++++ ++.+.+..
T Consensus 184 --------------------~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~g~Iv~~~~~~~~~~~~~~--------- 234 (445)
T 2cav_A 184 --------------------PSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMPKDQIQEISKHA--------- 234 (445)
T ss_dssp --------------------CCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECCCC------------------
T ss_pred --------------------hhhhhcCCHHHHHHHhCCCHHHHHhhhcccCCCCcEEEeCCcchhhhcccc---------
Confidence 589999999999999999999999999877778999999854 11111100
Q ss_pred hhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceE
Q 048197 291 QEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSV 370 (480)
Q Consensus 291 ~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei 370 (480)
.....||+++++|+|+|+ +++|+|++.+|+++++|+.+||+|++++||+++++|+||||++|||||||+||
T Consensus 235 ---~~~~~~g~~~~~~~~~l~------~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei 305 (445)
T 2cav_A 235 ---QSSSRKTLSSQDKPFNLR------SRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVI 305 (445)
T ss_dssp --------------CCCEETT------SSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEE
T ss_pred ---cccCCCCCCCcccceecc------ccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEE
Confidence 011348999999999986 47788999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeEEEEEEecCC--------ce--EEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-CCcceeecc-cc
Q 048197 371 VYITRGNGRMQIVAENG--------EN--VFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND-VAKTSQLAG-RA 438 (480)
Q Consensus 371 ~yV~~G~grv~vv~~~G--------~~--~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~-~~~~~~LAG-~~ 438 (480)
+||++|+++|+||+++| ++ +|+.+|++|||+|||+||+|++.|+ ++++|++|++++ ++..++||| ++
T Consensus 306 ~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~~~~~v~f~~~~~~~~~~~laG~~~ 384 (445)
T 2cav_A 306 LVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-SDLNMVGIGVNAENNERNFLAGHKE 384 (445)
T ss_dssp EEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-SSEEEEEEEESCTTCCEEESSSSTT
T ss_pred EEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-CCeEEEEEEccCCCCCcEEcccchh
Confidence 99999999999999985 34 7999999999999999999999988 689999999887 889999999 89
Q ss_pred ccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCC
Q 048197 439 SVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPR 478 (480)
Q Consensus 439 svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~ 478 (480)
+||++||.+||++||+++.+++++|++++++++|++|+++
T Consensus 385 sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~~~~~~~~~ 424 (445)
T 2cav_A 385 NVIRQIPRQVSDLTFPGSGEEVEELLENQKESYFVDGQPR 424 (445)
T ss_dssp BSGGGSCHHHHHHHSSSCHHHHHHHHHHCCSCSEEECC--
T ss_pred hhhhhCCHHHHHHHHCcCHHHHHHHHhcCCccEEeCCchh
Confidence 9999999999999999999999999999999999966443
No 10
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=100.00 E-value=7e-75 Score=611.43 Aligned_cols=349 Identities=20% Similarity=0.371 Sum_probs=310.9
Q ss_pred cceecCCceEEE---eCCCChhccccC-eeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcc
Q 048197 57 QRVESEAGVTEF---WDQNDEQLQCAN-VAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRS 132 (480)
Q Consensus 57 ~~~~se~G~~e~---~~~~~~~l~~~g-vs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~ 132 (480)
.++++++|.++. ||+++++|+|++ +++++++|+|||+++|||+++++|+||++|+|++++++|+|.+
T Consensus 33 ~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~--------- 103 (434)
T 2ea7_A 33 TLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRD--------- 103 (434)
T ss_dssp EEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEE---------
T ss_pred ceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCE---------
Confidence 379999999998 888889999998 9999999999999999999999999999999999999998865
Q ss_pred cccccccccccceeEeecCCcEEEeCCCCEEEEEcCC-CCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccc
Q 048197 133 SESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDG-PSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQS 211 (480)
Q Consensus 133 ~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G-~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~ 211 (480)
+++|++||||+||+|++||++|+| +++|++|+++|+++..+ .+++|+|+|++++
T Consensus 104 -------------~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg----~~~~f~l~g~~~~-------- 158 (434)
T 2ea7_A 104 -------------SYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPH----RFQDFFLSSTEAQ-------- 158 (434)
T ss_dssp -------------EEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTT----BCCEEECSCCSSC--------
T ss_pred -------------EEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCC----ceeeeeecCCcch--------
Confidence 479999999999999999999998 89999999999887654 3789999998532
Q ss_pred cCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhc-cccc---------cceeEEEeccceeccCCcc
Q 048197 212 QGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQ-RPQM---------QKGIIVRVEEELRVLSPQR 281 (480)
Q Consensus 212 ~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~-~~~~---------~rg~Iv~v~~~l~~~~P~~ 281 (480)
.|||++||+++||+||+||.+++++|+ +++| ++|+||+++++.
T Consensus 159 --------------------~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~~~q~~g~Iv~~~~~~------- 211 (434)
T 2ea7_A 159 --------------------QSYLRGFSKNILEASFDSDFKEINRVLFGEERQQQQGEESREEGVIVELKREQ------- 211 (434)
T ss_dssp --------------------CCGGGGSCHHHHHHHHTSCHHHHHHHHTCC---------CCCSSSEEECCHHH-------
T ss_pred --------------------hhhhhcCCHHHHHHHhCCCHHHHHhhhhcccccccccccccccceEEECCccc-------
Confidence 589999999999999999999999999 7654 469999987531
Q ss_pred cchhhHHHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecccccccc
Q 048197 282 GREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAP 361 (480)
Q Consensus 282 ~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~P 361 (480)
.++..........||+++++|+|+|+ +++|.|++++|+++++++.+||+|++++||+++++|+||||++|
T Consensus 212 ----~~~~~~~~~~~~~~g~~~~~~~~~l~------~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~p 281 (434)
T 2ea7_A 212 ----IQELMKHAKSSSRKELSSQDEPFNLR------NSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLP 281 (434)
T ss_dssp ----HHHHHTTSBCCCSSCTTCSSSCEETT------SSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE
T ss_pred ----ChhhcccccccCCCCCCCcccceeec------cCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeecc
Confidence 00000111112358999999999986 46788999999999999999999999999999999999999999
Q ss_pred ccccCCceEEEEEEeeEEEEEEecCC----------c--eEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-C
Q 048197 362 HWNLNAHSVVYITRGNGRMQIVAENG----------E--NVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND-V 428 (480)
Q Consensus 362 Hwh~nA~ei~yV~~G~grv~vv~~~G----------~--~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~-~ 428 (480)
||||||+||+||++|+|+|+||+++| + ++|+++|++|||+|||+|++|++.|. ++++|++|++++ +
T Consensus 282 H~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~-~~~~~v~f~~~~~~ 360 (434)
T 2ea7_A 282 HYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT-SNLNFFAFGINAEN 360 (434)
T ss_dssp EEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES-SSEEEEEEEETCTT
T ss_pred EEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC-CCeEEEEEECCCCC
Confidence 99999999999999999999999976 3 38999999999999999999999888 689999999887 7
Q ss_pred Ccceeecc-ccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCC
Q 048197 429 AKTSQLAG-RASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGP 477 (480)
Q Consensus 429 ~~~~~LAG-~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~ 477 (480)
+..++||| +++||++||.+||+++|+++.+++++|++++++.+|++|++
T Consensus 361 ~~~~~laG~~~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~~~~~~~~ 410 (434)
T 2ea7_A 361 NRRNFLAGGKDNVMSEIPTEVLEVSFPASGKKVEKLIKKQSESHFVDAQP 410 (434)
T ss_dssp CCEEESSSSTTBGGGGSCHHHHHHHSSSCHHHHHHHHTTCCSCSEEECCC
T ss_pred CCceecccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCccEEECCCc
Confidence 88999999 89999999999999999999999999999999999996643
No 11
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=100.00 E-value=2.2e-75 Score=611.47 Aligned_cols=349 Identities=21% Similarity=0.352 Sum_probs=306.1
Q ss_pred cceecCCceEEEe---CCCChhccc-cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcc
Q 048197 57 QRVESEAGVTEFW---DQNDEQLQC-ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRS 132 (480)
Q Consensus 57 ~~~~se~G~~e~~---~~~~~~l~~-~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~ 132 (480)
++|+||+|.|++| |.++++|+| .++++++++|+|+|+.+|||.+|++++||++|+|++|+|+|+|.+
T Consensus 16 ~~~~se~G~i~~l~~f~~~s~~l~~l~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~--------- 86 (418)
T 3s7i_A 16 TRYGNQNGRIRVLQRFDQRSRQFQNLQNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRK--------- 86 (418)
T ss_dssp EEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEE---------
T ss_pred ceEEcCCcEEEEecccCCcchhcccccceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEE---------
Confidence 5899999999998 556789999 689999999999999999999999999999999999999998853
Q ss_pred cccccccccccceeEeecCCcEEEeCCCCEEEEEcCC-CCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccc
Q 048197 133 SESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDG-PSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQS 211 (480)
Q Consensus 133 ~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G-~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~ 211 (480)
+++|++||||+||+|++||+||.| +++|+++++.|++|. |+.++.|||||++.
T Consensus 87 -------------~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~----pg~~~~f~laG~~~--------- 140 (418)
T 3s7i_A 87 -------------SFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNT----PGQFEDFFPASSRD--------- 140 (418)
T ss_dssp -------------EEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSB----TTBCCEECSSCCSS---------
T ss_pred -------------EEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCC----CCccceeeccCCcc---------
Confidence 679999999999999999999975 578999999888763 67899999999853
Q ss_pred cCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhcccc--------------------ccceeEEEec
Q 048197 212 QGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQ--------------------MQKGIIVRVE 271 (480)
Q Consensus 212 ~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~--------------------~~rg~Iv~v~ 271 (480)
..+||++||+++||+||+|+.++++||+..+ +.+|.||+++
T Consensus 141 -------------------~~s~~~gf~~evLa~af~v~~~~v~kl~~~~~~~~~~~~~~~~~~~~~~~~q~~g~Iv~~~ 201 (418)
T 3s7i_A 141 -------------------QSSYLQGFSRNTLEAAFNAEFNEIRRVLLEENAGGEQEERGQRRWSTRSSENNEGVIVKVS 201 (418)
T ss_dssp -------------------CCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCC--------------------CCCSEEECC
T ss_pred -------------------hhHHhhcCCHHHHHHHHCcCHHHHHhhhcccccccccccccccccccccccccCCceEEcC
Confidence 2689999999999999999999999999432 4579999997
Q ss_pred cc-eeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCC-CcccccceeEE
Q 048197 272 EE-LRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNL-PILRYIQLSAE 349 (480)
Q Consensus 272 ~~-l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~-P~L~~l~lsa~ 349 (480)
++ ++.++|+... +..++++++ |.+++.+||.+ +.|.|++.+|+++++|+.+| |+|++++||++
T Consensus 202 ~~~~~~l~~~~~~------------~~~~~~~~~-~~~~~~~nl~~--~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~ 266 (418)
T 3s7i_A 202 KEHVEELTKHAKS------------VSKKGSEEE-GDITNPINLRE--GEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLT 266 (418)
T ss_dssp HHHHHHHHTTCBC--------------------C-TTCCCCEETTC--SCCSEEETTEEEEEECSBTTBHHHHHHTCEEE
T ss_pred hhhhhhccccccc------------cCCCCcCcc-cCCCccccccc--CCCceeCCCCeEEEechHHcchhhccCCeeEE
Confidence 53 4555554311 123667665 88899999985 56678999999999999999 99999999999
Q ss_pred eeeeccccccccccccCCceEEEEEEeeEEEEEEecCCc------------------------eEEeeecCCccEEEECC
Q 048197 350 KGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGE------------------------NVFDGQIREGQLIVVPQ 405 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~------------------------~~f~~~l~~GdV~vVPq 405 (480)
+++|+||||++|||||||+||+||++|+|+++||++++. ++++.+|++|||||||+
T Consensus 267 r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~ 346 (418)
T 3s7i_A 267 CVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPA 346 (418)
T ss_dssp EEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECT
T ss_pred EEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECC
Confidence 999999999999999999999999999999999998763 67889999999999999
Q ss_pred CcEEEEEcCCCCeEEEEEEecC-CCcceeeccc-cccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCC
Q 048197 406 GFAVVKRASNRGLEWISFKTND-VAKTSQLAGR-ASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 475 (480)
Q Consensus 406 g~~~~~~ag~e~l~~v~f~ts~-~~~~~~LAG~-~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p 475 (480)
||+|+++++. +|+|++|.+++ ++..++|||+ ++||++||.+||++||+++.+++++|+++|++++|++.
T Consensus 347 G~~~~~~~~~-~l~~v~f~~~~~~~~~~~LAG~~~sv~~~~~~evla~af~v~~~~v~~L~~~q~e~~~~~~ 417 (418)
T 3s7i_A 347 AHPVAINASS-ELHLLGFGINAENNHRIFLAGDKDNVIDQIEKQAKDLAFPGSGEQVEKLIKNQKESHFVSA 417 (418)
T ss_dssp TCCEEEEESS-CEEEEEEEESCTTCCEEESSSSTTBHHHHSCHHHHHHHSSSCHHHHHHHHHTCCSCSEEEC
T ss_pred CCEEEEECCC-CEEEEEEEcCCCCCcceEccCchhhhhhcCCHHHHHHHhCCCHHHHHHHHhcCCcceeecC
Confidence 9999998864 59999999887 8899999999 59999999999999999999999999999999998854
No 12
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=100.00 E-value=8.6e-75 Score=608.25 Aligned_cols=353 Identities=20% Similarity=0.366 Sum_probs=312.4
Q ss_pred CCCCcceecCCceEEE---eCCCChhccccC-eeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhh
Q 048197 53 LEPQQRVESEAGVTEF---WDQNDEQLQCAN-VAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQES 128 (480)
Q Consensus 53 ~eP~~~~~se~G~~e~---~~~~~~~l~~~g-vs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~ 128 (480)
..+..++++|+|.++. |++++++|+|++ +++++++|+|||+.+|||++++||+||++|+|++++|+|+|.+
T Consensus 17 ~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~----- 91 (416)
T 1uij_A 17 NSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRD----- 91 (416)
T ss_dssp GSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEE-----
T ss_pred ccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCe-----
Confidence 3455689999999998 888889999998 9999999999999999999999999999999999999998765
Q ss_pred hhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCC-CCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccc
Q 048197 129 QQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDG-PSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQG 207 (480)
Q Consensus 129 ~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G-~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~ 207 (480)
.++|++||||+||+|++||++|+| +++|++|+++++++..+ .+++|+|+|+++
T Consensus 92 -----------------~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg----~~~~f~l~g~~~----- 145 (416)
T 1uij_A 92 -----------------SYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPG----RYDDFFLSSTQA----- 145 (416)
T ss_dssp -----------------EEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTT----BCCEEESSCBSS-----
T ss_pred -----------------EEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCC----cceeeeecCCcc-----
Confidence 469999999999999999999994 99999999999876544 478999999843
Q ss_pred cccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhc-cccc----cceeEEEeccc-eeccCCcc
Q 048197 208 YSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQ-RPQM----QKGIIVRVEEE-LRVLSPQR 281 (480)
Q Consensus 208 ~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~-~~~~----~rg~Iv~v~~~-l~~~~P~~ 281 (480)
..+||++||+++||+||+|+.+++++|+ ++++ ++|+||+++++ ++.+
T Consensus 146 -----------------------~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~g~Iv~~~~~~~~~~---- 198 (416)
T 1uij_A 146 -----------------------QQSYLQGFSHNILETSFHSEFEEINRVLFGEEEEQRQQEGVIVELSKEQIRQL---- 198 (416)
T ss_dssp -----------------------CCCGGGGSCHHHHHHHHTSCHHHHHHHHTCTTCGGGSBSSSEEECCHHHHHHH----
T ss_pred -----------------------cchhhhcCCHHHHHHHhCcCHHHHHhhhhccccccccCcceEEEeCCcccchh----
Confidence 1589999999999999999999999999 7763 57999998753 1100
Q ss_pred cchhhHHHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecccccccc
Q 048197 282 GREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAP 361 (480)
Q Consensus 282 ~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~P 361 (480)
.+.......||++++.|+|+|+ +++|+|++.+|+++++|+.+||+|++++||+++++|+||||++|
T Consensus 199 --------~~~~~~~~~~g~~~~~~~~~l~------~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~p 264 (416)
T 1uij_A 199 --------SRRAKSSSRKTISSEDEPFNLR------SRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLP 264 (416)
T ss_dssp --------TSSCBCCCGGGGGCSSSCEETT------SSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE
T ss_pred --------hhcccccCCCCCCCcccceecc------ccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecc
Confidence 0000112348999999999986 46788999999999999999999999999999999999999999
Q ss_pred ccccCCceEEEEEEeeEEEEEEecCCc-------------eEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-
Q 048197 362 HWNLNAHSVVYITRGNGRMQIVAENGE-------------NVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND- 427 (480)
Q Consensus 362 Hwh~nA~ei~yV~~G~grv~vv~~~G~-------------~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~- 427 (480)
||||+|+||+||++|+|+|+||+++|. ++|+.+|++|||+|||+|++|++.|. ++++|++|++++
T Consensus 265 H~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~-~~~~~l~f~~~~~ 343 (416)
T 1uij_A 265 HFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-SNLNFLAFGINAE 343 (416)
T ss_dssp EEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES-SSEEEEEEEETCT
T ss_pred eEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC-CCeEEEEEEcCCC
Confidence 999999999999999999999999872 48999999999999999999999988 789999999887
Q ss_pred CCcceeecc-ccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCC
Q 048197 428 VAKTSQLAG-RASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPR 478 (480)
Q Consensus 428 ~~~~~~LAG-~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~ 478 (480)
++..++||| +++||++||.+||+++|+++++++++|+++|++++|++|++.
T Consensus 344 ~~~~~~laG~~~sv~~~~p~~vla~af~~~~~~v~~l~~~~~~~~~~~~~~~ 395 (416)
T 1uij_A 344 NNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYFVDAQPQ 395 (416)
T ss_dssp TCCEEESSSSTTBSGGGSCHHHHHHHSSSCHHHHHHHTTSCCSCSEEEC---
T ss_pred CCcceecccchhhHHHhCCHHHHHHHHCcCHHHHHHHHhcCCccEEECCccc
Confidence 899999999 799999999999999999999999999999999999977544
No 13
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=100.00 E-value=9.2e-71 Score=573.10 Aligned_cols=334 Identities=18% Similarity=0.316 Sum_probs=290.5
Q ss_pred cceecCCceEEE---eCCCChhccccC-eeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcc
Q 048197 57 QRVESEAGVTEF---WDQNDEQLQCAN-VAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRS 132 (480)
Q Consensus 57 ~~~~se~G~~e~---~~~~~~~l~~~g-vs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~ 132 (480)
.++++|+|.|+. ||++++.|+|+| +++++++|+|||+++||||+|++|+||++|+|++|+|+|+|++
T Consensus 24 ~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~--------- 94 (397)
T 2phl_A 24 TLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRR--------- 94 (397)
T ss_dssp EEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEE---------
T ss_pred ceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcE---------
Confidence 479999999998 798889999998 9999999999999999999999999999999999999999875
Q ss_pred cccccccccccceeEeecCCcE------EEeCCCCEEEEEcCC-CCcEEEEEEeeCCCCCccccccceeeeecCCCCcCc
Q 048197 133 SESQSRSQDQHQKVRQIREGDL------VALPTGSANWIYNDG-PSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQL 205 (480)
Q Consensus 133 ~~~~~~~~d~~qk~~~l~~GDV------~~iPaG~~h~~~N~G-~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~ 205 (480)
+++|++||+ |+||+|++||++|+| +++|++|+++|++|.. .++.|+|||+..
T Consensus 95 -------------~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~-----~~~~f~L~G~~~--- 153 (397)
T 2phl_A 95 -------------EYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNP-----QIHEFFLSSTEA--- 153 (397)
T ss_dssp -------------EEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSS-----SCCEEECCCBTT---
T ss_pred -------------EEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCc-----cceeeeccCCCc---
Confidence 469999999 999999999999999 7999999999988753 578999999843
Q ss_pred cccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhc-cccc-cceeEEEeccceeccCCcccc
Q 048197 206 QGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQ-RPQM-QKGIIVRVEEELRVLSPQRGR 283 (480)
Q Consensus 206 ~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~-~~~~-~rg~Iv~v~~~l~~~~P~~~~ 283 (480)
..+||++||+++||+||+|+.+++++|+ ++++ ++|.||+++++- . +
T Consensus 154 -------------------------~~s~~~~~~~~vLa~af~v~~~~v~~l~~~~~~q~~~~Iv~~~~~~------~-~ 201 (397)
T 2phl_A 154 -------------------------QQSYLQEFSKHILEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQ------I-K 201 (397)
T ss_dssp -------------------------BCCGGGGSCHHHHHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTT------H-H
T ss_pred -------------------------hhHHhhcCCHHHHHHHhCCCHHHHHhhhhcccccccCceEEcCccc------c-h
Confidence 2689999999999999999999999999 5543 578999987540 0 0
Q ss_pred hhhHHHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecccccccccc
Q 048197 284 EQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHW 363 (480)
Q Consensus 284 ~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHw 363 (480)
+..+ .......+|+++ ..|+|++.+|+++++|+.+ ++||+++++|+||||++|||
T Consensus 202 --~~~~--~~~~~~~~~l~~---------------~~p~~~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~ 256 (397)
T 2phl_A 202 --ELSK--HAKSSSRKSLSK---------------QDNTIGNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHY 256 (397)
T ss_dssp --HHHH--HHHTC------------------------CEEEETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEE
T ss_pred --hhhc--cCCCcccccccc---------------cCCcccCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeE
Confidence 1111 101112344433 3478999999999999988 78999999999999999999
Q ss_pred ccCCceEEEEEEeeEEEEEEec------CCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-CCcceeecc
Q 048197 364 NLNAHSVVYITRGNGRMQIVAE------NGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND-VAKTSQLAG 436 (480)
Q Consensus 364 h~nA~ei~yV~~G~grv~vv~~------~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~-~~~~~~LAG 436 (480)
||||+||.||++|+|+|+||++ +|+++|+.+|++|||+|||+|++|++.|.. +++|++|++++ ++..++|||
T Consensus 257 h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~-~l~~l~f~~~s~~~~~~~laG 335 (397)
T 2phl_A 257 YSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS-NVNFTGFGINANNNNRNLLAG 335 (397)
T ss_dssp ESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS-SEEEEEEEESCTTCCEEESSS
T ss_pred cCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC-CeEEEEEECCCCCCcceeccc
Confidence 9999999999999999999999 788999999999999999999999998875 89999999887 889999999
Q ss_pred -ccccccCCC-----HHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCCC
Q 048197 437 -RASVIRGLP-----LDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPR 478 (480)
Q Consensus 437 -~~svl~~lp-----~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~~ 478 (480)
+++||++|| .+||+++|+++++++++|++++++.+|++|+.+
T Consensus 336 ~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~~~e~~i~~~~~~ 383 (397)
T 2phl_A 336 KTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINKQSGSYFVDAHHH 383 (397)
T ss_dssp SSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTTCCCCSEEECC--
T ss_pred chhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhcCCccEEeCCCcc
Confidence 899999999 999999999999999999999999999976443
No 14
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=100.00 E-value=9.8e-44 Score=364.37 Aligned_cols=334 Identities=16% Similarity=0.226 Sum_probs=265.9
Q ss_pred ccCCCCCCcceecCCceEEEeCCCChhcccc-CeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchh
Q 048197 49 DLNALEPQQRVESEAGVTEFWDQNDEQLQCA-NVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQ 126 (480)
Q Consensus 49 ~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~-gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~ 126 (480)
++....| +.+++|.++.|+.. .|.++ ++++.+++|+||++..||||. +.|++||++|+++++++.++..
T Consensus 24 ~~~~~~~---~~~~~G~~~~~~~~--~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~---- 94 (361)
T 2vqa_A 24 AFSKTPL---VLYDGGTTKQVGTY--NFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGK---- 94 (361)
T ss_dssp CGGGSCC---EEETTEEEEEESTT--TCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSC----
T ss_pred EcccCCc---eecCCceEEEeChh--hCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCc----
Confidence 5666655 35799999999863 45554 789999999999999999997 9999999999999999987542
Q ss_pred hhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCcc
Q 048197 127 ESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQ 206 (480)
Q Consensus 127 ~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~ 206 (480)
++++.|++||+++||+|++||++|.++++++++.+++..+..++ ..|++
T Consensus 95 -----------------~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~-----~~~~~--------- 143 (361)
T 2vqa_A 95 -----------------VEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEG-----ATFSV--------- 143 (361)
T ss_dssp -----------------EEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTT-----SSEEH---------
T ss_pred -----------------EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCcccc-----ceecH---------
Confidence 13579999999999999999999999999999999988776542 23332
Q ss_pred ccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhh
Q 048197 207 GYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQE 286 (480)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e 286 (480)
.+||++||.++|+++|+++.+.+++|...+. .|+... ..|+....
T Consensus 144 -------------------------~~~~~~~p~~vLa~~~~v~~~~~~~l~~~~~---~i~~~~-----~~p~~~~~-- 188 (361)
T 2vqa_A 144 -------------------------TDWLSHTPIAWVEENLGWTAAQVAQLPKKQV---YISSYG-----PASGPLAS-- 188 (361)
T ss_dssp -------------------------HHHHHTSCHHHHHHHHTCCHHHHTTSCSSCC---CEECSS-----CCCCCGGG--
T ss_pred -------------------------hHHHHhCCHHHHHHHhCcCHHHHHhccccCc---eEEeCC-----CCCCcccc--
Confidence 5899999999999999999999999987542 465311 12221100
Q ss_pred HHHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccC
Q 048197 287 QEQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLN 366 (480)
Q Consensus 287 ~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~n 366 (480)
. .-....+...+.+|. +. . ..++++.+.+|+++.+++.++|.++. +++.++.|.||++..||||++
T Consensus 189 -~----~~~~~~~~~~~~~~~-~~----~--~~~~~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~ 254 (361)
T 2vqa_A 189 -A----TPQGQTAKIEVPHTH-NL----L--GQQPLVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPN 254 (361)
T ss_dssp -C----CCSSCCCBCCSCCEE-EC----T--TSCCSEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSS
T ss_pred -c----cccCcCCCCCcceEe-cc----c--cCCCcccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCC
Confidence 0 000011233344442 11 1 13345678899999999999999874 889999999999999999999
Q ss_pred CceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEEEecCCCcceeeccccccccCCC
Q 048197 367 AHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRGLP 445 (480)
Q Consensus 367 A~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp 445 (480)
++|++||++|++++++++++|+ .+...|++||+++||+|.+|+..| ++++++++++.+.+++....+| +|++++|
T Consensus 255 ~~E~~~Vl~G~~~~~v~~~~g~-~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~ 330 (361)
T 2vqa_A 255 ADEWQYVLDGEMDLTVFASEGK-ASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLS---TWLASNP 330 (361)
T ss_dssp CCEEEEEEESCEEEEEECSTTC-EEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHH---HHHHTSC
T ss_pred CCEEEEEEeCEEEEEEEcCCCc-EEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHH---HHhhhCC
Confidence 9999999999999999998876 234589999999999999999866 6889999999998888888886 6999999
Q ss_pred HHHHHHHcCCCHHHHHHHHhcCCCeEEeCCCC
Q 048197 446 LDVIQNSFQVSRDEAQRLKYNRQELTVFTPGP 477 (480)
Q Consensus 446 ~eVla~af~vs~e~~~~l~~~q~e~~i~~p~~ 477 (480)
.+||+++|+++++++++|+++ .+.+|. |+.
T Consensus 331 ~~vl~~~f~~~~~~~~~l~~~-~~~~~~-~~~ 360 (361)
T 2vqa_A 331 SSVLGNTFQISPELTKKLPVQ-DTIFSL-PTQ 360 (361)
T ss_dssp HHHHHHHHTCCHHHHTTSCCS-CCSEEC-CCC
T ss_pred HHHHHHHHCcCHHHHHhhhcc-CCcccc-CCC
Confidence 999999999999999999754 555555 543
No 15
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=100.00 E-value=4e-35 Score=303.36 Aligned_cols=322 Identities=18% Similarity=0.262 Sum_probs=248.7
Q ss_pred ccCCCCCCcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhh
Q 048197 49 DLNALEPQQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQE 127 (480)
Q Consensus 49 ~L~a~eP~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~ 127 (480)
++...+| ...++|.+..++... +.+. ++++.+++|.||+...||||.+.|++||++|++.++++..++..
T Consensus 51 ~~~~~~~---~~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~---- 121 (385)
T 1j58_A 51 SFSDTHN---RLEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRS---- 121 (385)
T ss_dssp CGGGSCC---EEETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCE----
T ss_pred EcccCCc---cccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcE----
Confidence 4455555 356999999988654 5444 79999999999999999999999999999999999998764321
Q ss_pred hhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccc
Q 048197 128 SQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQG 207 (480)
Q Consensus 128 ~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~ 207 (480)
.++.|++||+++||+|++|++.|.+ ++++++.+++...... ...|.+
T Consensus 122 -----------------~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~-----~~~~~~---------- 168 (385)
T 1j58_A 122 -----------------FIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSE-----NSTFQL---------- 168 (385)
T ss_dssp -----------------EEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCG-----GGEEEH----------
T ss_pred -----------------EEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccc-----cchhhh----------
Confidence 1469999999999999999999987 4688888888766432 234443
Q ss_pred cccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhH
Q 048197 208 YSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQ 287 (480)
Q Consensus 208 ~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~ 287 (480)
.++|.+++.++|+++|+++.+.+++|...+. .|+... .|..- ..
T Consensus 169 ------------------------~~~~~~~p~evla~~~~vs~~~~~~l~~~~~---~i~~~~------~p~~l---~~ 212 (385)
T 1j58_A 169 ------------------------TDWLAHTPKEVIAANFGVTKEEISNLPGKEK---YIFENQ------LPGSL---KD 212 (385)
T ss_dssp ------------------------HHHHHTSCHHHHHHHHTCCTGGGTTSCSSCC---SEECCC------CCCCH---HH
T ss_pred ------------------------hhhhhcccHHHHHHHhCCCHHHHHhcccccc---eEeccC------CCCcc---cc
Confidence 4799999999999999999999999987442 555321 12110 00
Q ss_pred HHhhhhcCCCCCCCccceeccccccCCCCCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCC
Q 048197 288 EQEQEFQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNA 367 (480)
Q Consensus 288 ~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA 367 (480)
. . . ....|... ..+.++..+ .++ +...+|.++.+++.+++..+ ++++..+.|.||++..||||+.+
T Consensus 213 ~-~--~--~~~~~~~~----~~~v~~~~~--~~~-~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~ 278 (385)
T 1j58_A 213 D-I--V--EGPNGEVP----YPFTYRLLE--QEP-IESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNT 278 (385)
T ss_dssp H-C--C--CCTTCCCS----SCSEEEGGG--SCC-EECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSS
T ss_pred c-c--c--cCCCCCCC----CCeeeeccc--CCC-eeCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCC
Confidence 0 0 0 00011111 111222222 223 45678999999999988754 58999999999999999999999
Q ss_pred ceEEEEEEeeEEEEEEecCCc-eEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEEEecCCCcceeeccccccccCCC
Q 048197 368 HSVVYITRGNGRMQIVAENGE-NVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRGLP 445 (480)
Q Consensus 368 ~ei~yV~~G~grv~vv~~~G~-~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp 445 (480)
.|+.||++|++++++.+++|+ ..+ .|++||+++||++.+|+..| ++++++++++.+.+.+....+ .+||+.+|
T Consensus 279 ~E~~~Vl~G~~~~~i~~~~g~~~~~--~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~---~~~l~~~~ 353 (385)
T 1j58_A 279 HEWQYYISGKARMTVFASDGHARTF--NYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSL---NQWLAMLP 353 (385)
T ss_dssp CEEEEEEESEEEEEEEEETTEEEEE--EEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEH---HHHHHTSC
T ss_pred CEEEEEEeCeEEEEEEcCCCcEEEE--EEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCH---HHHHHhCC
Confidence 999999999999999988885 555 79999999999999998755 688999999988776655444 68999999
Q ss_pred HHHHHHHcCCCHHHHHHHHhcC
Q 048197 446 LDVIQNSFQVSRDEAQRLKYNR 467 (480)
Q Consensus 446 ~eVla~af~vs~e~~~~l~~~q 467 (480)
.+|++++|+++++++++|++.+
T Consensus 354 ~~v~~~~f~~~~~~~~~l~~~~ 375 (385)
T 1j58_A 354 ETFVQAHLDLGKDFTDVLSKEK 375 (385)
T ss_dssp HHHHHHHHTCCHHHHTTCCSSC
T ss_pred HHHHHHHhCCCHHHHHhhhccC
Confidence 9999999999999999998653
No 16
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=100.00 E-value=2.1e-33 Score=262.38 Aligned_cols=167 Identities=17% Similarity=0.322 Sum_probs=147.8
Q ss_pred ccCCCCCCcceecCCceEEE---eCCCChhccc-cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccc
Q 048197 49 DLNALEPQQRVESEAGVTEF---WDQNDEQLQC-ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPET 124 (480)
Q Consensus 49 ~L~a~eP~~~~~se~G~~e~---~~~~~~~l~~-~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~et 124 (480)
+++..+| ++++++|.++. ||.++++|.| .++++.+++|+||++.+|||++++|++||++|+++++++.++|.+
T Consensus 7 ~~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~- 83 (178)
T 1dgw_A 7 RSNKFLT--LFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRD- 83 (178)
T ss_dssp CGGGEEE--EEEETTEEEEEECCTTSSCGGGGGGTTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEE-
T ss_pred chhhccc--ceEcCCCEEEEEcccCCcchhcCCcCcEEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcE-
Confidence 3444444 78999999999 8888899999 599999999999999999977899999999999999999988643
Q ss_pred hhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCC-cEEEEEEeeCCCCCccccccceeeeecCCCCc
Q 048197 125 YQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPS-ELVVVALVDVGNSDNQLDQFLRKFYLGGNPQP 203 (480)
Q Consensus 125 f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~-~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~ 203 (480)
++.|++||+++||+|++||++|+|++ +|++++++++++.. +.++.|||||++.
T Consensus 84 ---------------------~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~----g~~~~~~l~g~~~- 137 (178)
T 1dgw_A 84 ---------------------TYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRP----GTVEDFFLSSTKR- 137 (178)
T ss_dssp ---------------------EEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSST----TCCCEEESSCCSS-
T ss_pred ---------------------EEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCC----CceEEeeccCCcC-
Confidence 57999999999999999999999986 89999998887543 4678999999853
Q ss_pred CccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEec
Q 048197 204 QLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVE 271 (480)
Q Consensus 204 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~ 271 (480)
+++||++||+++||+||+|+.+++++|+.+++++|.||||+
T Consensus 138 ---------------------------~~~~~~~~p~~vla~af~v~~~~~~~l~~~~~~~~~iv~~~ 178 (178)
T 1dgw_A 138 ---------------------------LPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMP 178 (178)
T ss_dssp ---------------------------CCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECC
T ss_pred ---------------------------cchhhhhCCHHHHHHHHCcCHHHHHHHhcCcCcCceEEEcC
Confidence 26999999999999999999999999997777789999974
No 17
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.96 E-value=9.6e-30 Score=266.31 Aligned_cols=180 Identities=17% Similarity=0.273 Sum_probs=144.0
Q ss_pred ccCCCCCCcceecCCceEEEeCC-CC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEEcCCCccch
Q 048197 49 DLNALEPQQRVESEAGVTEFWDQ-ND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAVFPGCPETY 125 (480)
Q Consensus 49 ~L~a~eP~~~~~se~G~~e~~~~-~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg~~etf 125 (480)
+|...+| .+.+.+|.+..+|. +. |.|+|+||+++|++|.||||++|||| +|++|+||++|+|++|+|+|+|+..=
T Consensus 231 nl~~~~p--~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~ 308 (418)
T 3s7i_A 231 NLREGEP--DLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQ 308 (418)
T ss_dssp ETTCSCC--SEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC---
T ss_pred ccccCCC--ceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCcccc
Confidence 6777777 57899999999986 67 99999999999999999999999997 79999999999999999999997311
Q ss_pred hhhhhcccc---cccccccccce-eEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCC
Q 048197 126 QESQQRSSE---SQSRSQDQHQK-VRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNP 201 (480)
Q Consensus 126 ~~~~~~~~~---~~~~~~d~~qk-~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~ 201 (480)
++..+++++ +.+++.|+|++ ..+|++||||+||+|++||++|++ +|+++++ ++++. +++.+||||++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f-~~~~~------~~~~~~LAG~~ 379 (418)
T 3s7i_A 309 RGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGF-GINAE------NNHRIFLAGDK 379 (418)
T ss_dssp ----------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEE-EESCT------TCCEEESSSST
T ss_pred ccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEE-EcCCC------CCcceEccCch
Confidence 000000111 12234678888 589999999999999999999975 4888885 55543 24789999962
Q ss_pred CcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEe
Q 048197 202 QPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRV 270 (480)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v 270 (480)
+|||++||+++||+||+||.+++++|++.+++. .|+.+
T Consensus 380 ------------------------------~sv~~~~~~evla~af~v~~~~v~~L~~~q~e~-~~~~~ 417 (418)
T 3s7i_A 380 ------------------------------DNVIDQIEKQAKDLAFPGSGEQVEKLIKNQKES-HFVSA 417 (418)
T ss_dssp ------------------------------TBHHHHSCHHHHHHHSSSCHHHHHHHHHTCCSC-SEEEC
T ss_pred ------------------------------hhhhhcCCHHHHHHHhCCCHHHHHHHHhcCCcc-eeecC
Confidence 489999999999999999999999999988764 66643
No 18
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.94 E-value=3.3e-27 Score=220.45 Aligned_cols=150 Identities=17% Similarity=0.278 Sum_probs=130.4
Q ss_pred CCCcccCCCeEEEEEec-----CCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEee
Q 048197 319 GADAYNPRGGRVTTVNR-----FNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDG 393 (480)
Q Consensus 319 ~~~~~~~~~G~i~~~~~-----~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~ 393 (480)
..+++.+++|+++++++ ..||.|+ ++++.+++|.||+++.|| |++|+||+||++|++++++++++|..++
T Consensus 11 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~~~-- 85 (178)
T 1dgw_A 11 FLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGRDTY-- 85 (178)
T ss_dssp EEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETTEEEEE--
T ss_pred cccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCCCcEEE--
Confidence 44567889999999888 5678777 499999999999999999 9999999999999999999999876655
Q ss_pred ecCCccEEEECCCcEEEEEc-CCC-CeEEEEEEec-CCCc---ceeeccc---cccccCCCHHHHHHHcCCCHHHHHHHH
Q 048197 394 QIREGQLIVVPQGFAVVKRA-SNR-GLEWISFKTN-DVAK---TSQLAGR---ASVIRGLPLDVIQNSFQVSRDEAQRLK 464 (480)
Q Consensus 394 ~l~~GdV~vVPqg~~~~~~a-g~e-~l~~v~f~ts-~~~~---~~~LAG~---~svl~~lp~eVla~af~vs~e~~~~l~ 464 (480)
+|++||+++||+|.+|++.| +++ .++++++.++ .+|+ .++|+|. ++||+++|.+||+++|+++++++++|+
T Consensus 86 ~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~~p~~vla~af~v~~~~~~~l~ 165 (178)
T 1dgw_A 86 KLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTL 165 (178)
T ss_dssp EEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHT
T ss_pred EECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhhCCHHHHHHHHCcCHHHHHHHh
Confidence 79999999999999999866 554 7999987544 4554 6789998 799999999999999999999999999
Q ss_pred -hcCCCeEEe
Q 048197 465 -YNRQELTVF 473 (480)
Q Consensus 465 -~~q~e~~i~ 473 (480)
.++++..|+
T Consensus 166 ~~~~~~~~iv 175 (178)
T 1dgw_A 166 LQEEQEGVIV 175 (178)
T ss_dssp TSCCSSSSEE
T ss_pred cCcCcCceEE
Confidence 445667776
No 19
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.93 E-value=1.1e-25 Score=237.73 Aligned_cols=168 Identities=16% Similarity=0.325 Sum_probs=145.4
Q ss_pred cCccccc-ccCCCCCC--cceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEE
Q 048197 42 QTQCNIQ-DLNALEPQ--QRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGA 116 (480)
Q Consensus 42 ~~~C~~~-~L~a~eP~--~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~ 116 (480)
...|.+. +.|..+|. ..+.+.+|.+...|..+ |.|+.+||++++++|.||||+.|||| +|+||+||++|++++++
T Consensus 280 e~~c~~r~~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~ 359 (466)
T 3kgl_A 280 ETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQV 359 (466)
T ss_dssp -CCSSCCCEEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEE
T ss_pred ccccceeccccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEE
Confidence 3458776 66777655 46899999999999866 99999999999999999999999998 79999999999999999
Q ss_pred EcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeee
Q 048197 117 VFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFY 196 (480)
Q Consensus 117 v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~ 196 (480)
|++....+| ..+|++||||+||+|++||+ |.|++++++|++++..|+ ...+
T Consensus 360 V~~~g~~~f--------------------~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np--------~~~~ 410 (466)
T 3kgl_A 360 VNDNGDRVF--------------------DGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANA--------QINT 410 (466)
T ss_dssp ECTTSCEEE--------------------EEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSC--------CEEE
T ss_pred EeCCCcEEE--------------------EeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCC--------cccc
Confidence 988654444 46899999999999999999 789999999999887664 3568
Q ss_pred ecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEe
Q 048197 197 LGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRV 270 (480)
Q Consensus 197 LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v 270 (480)
|||. ++||+++|+++||+||+|+.+++++|+..+++ .+|+..
T Consensus 411 LaG~-------------------------------~s~~~~lP~eVla~aF~v~~~~v~~Lk~~q~e-~~i~~~ 452 (466)
T 3kgl_A 411 LAGR-------------------------------TSVLRGLPLEVISNGYQISLEEARRVKFNTIE-TTLTHS 452 (466)
T ss_dssp SSST-------------------------------TCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCC-SSEEEC
T ss_pred ccch-------------------------------hhhhhhCCHHHHHHHhCcCHHHHHHHHhccCc-cEEECC
Confidence 8885 58999999999999999999999999988775 477754
No 20
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.93 E-value=4.8e-25 Score=234.26 Aligned_cols=167 Identities=17% Similarity=0.248 Sum_probs=142.2
Q ss_pred cCccccc-ccCCCCCC--cceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEE
Q 048197 42 QTQCNIQ-DLNALEPQ--QRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGA 116 (480)
Q Consensus 42 ~~~C~~~-~L~a~eP~--~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~ 116 (480)
.+.|.+. +.|..+|. ..+...+|.+...|..+ |.|+..||++++++|.||||+.|||| +|++|+||++|++++++
T Consensus 315 e~~c~~~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~ 394 (496)
T 3ksc_A 315 ETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQV 394 (496)
T ss_dssp -CCSSSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEE
T ss_pred ccccchhhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEE
Confidence 3468775 55555554 57888999999999876 99999999999999999999999997 79999999999999999
Q ss_pred EcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeee
Q 048197 117 VFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFY 196 (480)
Q Consensus 117 v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~ 196 (480)
|++....+| ..+|++||||+||+|++|++.|. ++++++|++++..|+ ...+
T Consensus 395 V~~~g~~~f--------------------~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np--------~~~~ 445 (496)
T 3ksc_A 395 VNCNGNTVF--------------------DGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRA--------GIAR 445 (496)
T ss_dssp ECTTSCEEE--------------------EEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTC--------CEEE
T ss_pred EeCCCcEEE--------------------EEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCC--------cccc
Confidence 988654443 35799999999999999998775 788999999876654 3567
Q ss_pred ecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEE
Q 048197 197 LGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVR 269 (480)
Q Consensus 197 LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~ 269 (480)
|||. ++||+++|+++||+||+|+.+++++|+..+++ .+|+.
T Consensus 446 LaG~-------------------------------~sv~~~~p~eVLa~aF~v~~~~v~~Lk~~q~e-~~i~~ 486 (496)
T 3ksc_A 446 LAGT-------------------------------SSVINNLPLDVVAATFNLQRNEARQLKSNNPF-KFLVP 486 (496)
T ss_dssp SSST-------------------------------TCTTTTSCHHHHHHHHTCCHHHHHHHHHSCCC-SSEEC
T ss_pred ccch-------------------------------hhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCc-cEEeC
Confidence 8885 58999999999999999999999999988765 57774
No 21
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.92 E-value=1.3e-24 Score=227.85 Aligned_cols=173 Identities=14% Similarity=0.196 Sum_probs=137.5
Q ss_pred CcccccccCCCCCCcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEEcCC
Q 048197 43 TQCNIQDLNALEPQQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAVFPG 120 (480)
Q Consensus 43 ~~C~~~~L~a~eP~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg 120 (480)
..|.+ +|....| .+.+.+|.+..+|..+ |.|+++|+++++++|.|||+++|||| +|+||+||++|+|++++|.|+
T Consensus 213 ~~~~~-~l~~~~p--~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~ 289 (416)
T 1uij_A 213 EDEPF-NLRSRNP--IYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIK 289 (416)
T ss_dssp SSSCE-ETTSSCC--SEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC
T ss_pred cccce-eccccCC--CccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCC
Confidence 45755 4556666 6899999999999866 99999999999999999999999998 699999999999999999887
Q ss_pred Cccchhhhhhcccccccccccccc--eeE--eecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeee
Q 048197 121 CPETYQESQQRSSESQSRSQDQHQ--KVR--QIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFY 196 (480)
Q Consensus 121 ~~etf~~~~~~~~~~~~~~~d~~q--k~~--~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~ 196 (480)
+... +++.+++++ ++. +|++|||++||+|++||++|. ++|.++++++.+. ++...+
T Consensus 290 g~~~-----------~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~-------~~~~~~ 349 (416)
T 1uij_A 290 EQQQ-----------KQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAE-------NNQRNF 349 (416)
T ss_dssp -----------------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCT-------TCCEEE
T ss_pred Cccc-----------cccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCC-------CCccee
Confidence 6320 001112223 234 999999999999999999998 5799999886542 135788
Q ss_pred ecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEE
Q 048197 197 LGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVR 269 (480)
Q Consensus 197 LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~ 269 (480)
|||+. ++||+++|+++|++||+++.+++++|+..+.+. +|+.
T Consensus 350 laG~~------------------------------~sv~~~~p~~vla~af~~~~~~v~~l~~~~~~~-~~~~ 391 (416)
T 1uij_A 350 LAGEK------------------------------DNVVRQIERQVQELAFPGSAQDVERLLKKQRES-YFVD 391 (416)
T ss_dssp SSSST------------------------------TBSGGGSCHHHHHHHSSSCHHHHHHHTTSCCSC-SEEE
T ss_pred cccch------------------------------hhHHHhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEEC
Confidence 99831 589999999999999999999999999877643 5664
No 22
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.91 E-value=3.6e-24 Score=226.56 Aligned_cols=165 Identities=16% Similarity=0.228 Sum_probs=139.0
Q ss_pred Cccccc-ccCCCCCC--cceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEE
Q 048197 43 TQCNIQ-DLNALEPQ--QRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAV 117 (480)
Q Consensus 43 ~~C~~~-~L~a~eP~--~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v 117 (480)
..|.+. +.|..+|. ..+...+|.+...|..+ |.|+.+|+++++++|.|||++.|||| +|+||+||++|++++++|
T Consensus 280 ~~~~~~l~~n~~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv 359 (459)
T 2e9q_A 280 TICTLRLKQNIGRSERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVV 359 (459)
T ss_dssp CGGGSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEE
T ss_pred cccceeeeecccccccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEE
Confidence 457543 23333322 46789999999999876 99999999999999999999999998 599999999999999999
Q ss_pred cCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeee
Q 048197 118 FPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL 197 (480)
Q Consensus 118 ~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~L 197 (480)
.+...++| ..+|++||||+||+|++||+.| |++++.+|++++..|+ ...+|
T Consensus 360 ~~~g~~~~--------------------~~~l~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~--------~~~~l 410 (459)
T 2e9q_A 360 DNFGQSVF--------------------DGEVREGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNA--------ITNLL 410 (459)
T ss_dssp CTTSCEEE--------------------EEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSC--------CEEES
T ss_pred eCCCCEEE--------------------eeEEeCCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCC--------cceee
Confidence 88654443 2479999999999999999999 7889999999876553 57889
Q ss_pred cCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEE
Q 048197 198 GGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIV 268 (480)
Q Consensus 198 aG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv 268 (480)
||. ++||+++|+++||+||+++.+++++|+..+++. +|+
T Consensus 411 aG~-------------------------------~s~~~~~p~~Vla~af~v~~~~v~~l~~~~~e~-~i~ 449 (459)
T 2e9q_A 411 AGR-------------------------------VSQMRMLPLGVLSNMYRISREEAQRLKYGQQEM-RVL 449 (459)
T ss_dssp SSS-------------------------------SSHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSC-SEE
T ss_pred cch-------------------------------hHHHHhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEe
Confidence 885 689999999999999999999999999876543 565
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.91 E-value=4.7e-24 Score=225.12 Aligned_cols=165 Identities=16% Similarity=0.231 Sum_probs=139.0
Q ss_pred Cccccc-ccCCCC--CCcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEE
Q 048197 43 TQCNIQ-DLNALE--PQQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAV 117 (480)
Q Consensus 43 ~~C~~~-~L~a~e--P~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v 117 (480)
..|.+. +.|..+ ...++...+|.+...|..+ |.|+..||++++++|.||||+.|||| +|+||+||++|++++++|
T Consensus 281 ~~c~~~l~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV 360 (465)
T 3qac_A 281 TICSARLAVNVDDPSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIV 360 (465)
T ss_dssp CTTTSCCEEETTCTTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEE
T ss_pred cccceeccccccccccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEE
Confidence 458665 434433 3356788999999999876 99999999999999999999999998 699999999999999999
Q ss_pred cCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeee
Q 048197 118 FPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL 197 (480)
Q Consensus 118 ~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~L 197 (480)
.+....+| ..+|++|||++||+|++|++. .|+++++++++++..|+ ...+|
T Consensus 361 ~~~g~~~f--------------------~~~l~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np--------~~~~L 411 (465)
T 3qac_A 361 NDQGQSVF--------------------DEELSRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENA--------MFQSL 411 (465)
T ss_dssp CTTSCEEE--------------------EEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTC--------CEEES
T ss_pred eCCCcEEE--------------------EEEecCCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCC--------ccccc
Confidence 88654444 357999999999999999986 57889999998876554 45678
Q ss_pred cCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEE
Q 048197 198 GGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIV 268 (480)
Q Consensus 198 aG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv 268 (480)
||. ++||+++|+++|++||+|+.+++++|+..+++ ..|+
T Consensus 412 aG~-------------------------------~sv~~~ip~eVla~aF~v~~e~v~~Lk~~~~e-~~i~ 450 (465)
T 3qac_A 412 AGR-------------------------------TSAIRSLPIDVVSNIYQISREEAFGLKFNRPE-TTLF 450 (465)
T ss_dssp SSS-------------------------------SBHHHHSCHHHHHHHHTCCHHHHHHHHHSCCS-CSEE
T ss_pred ccc-------------------------------hhhhhhCCHHHHHHHhCCCHHHHHHHHhccCc-cEEE
Confidence 885 68999999999999999999999999988765 3555
No 24
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.91 E-value=3.2e-24 Score=223.23 Aligned_cols=154 Identities=12% Similarity=0.185 Sum_probs=131.7
Q ss_pred CCcccCCCeEEEEEec--CCCCcccccc-eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecC
Q 048197 320 ADAYNPRGGRVTTVNR--FNLPILRYIQ-LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIR 396 (480)
Q Consensus 320 ~~~~~~~~G~i~~~~~--~~~P~L~~l~-lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~ 396 (480)
.+++.+++|+++.+++ .+.|.|++++ +++++++|+|||++.|||| +|+||+||++|++++++|++++..+ .+|+
T Consensus 23 ~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~~~~~~~--~~l~ 99 (397)
T 2phl_A 23 NTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVKPDDRRE--YFFL 99 (397)
T ss_dssp EEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEETTTEEE--EEEE
T ss_pred cceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEeCCCcEE--EEEC
Confidence 4678999999999832 3348999997 9999999999999999998 9999999999999999999977654 5899
Q ss_pred CccE------EEECCCcEEEEEc-C-CCCeEEEEEEec-CCC--cceeeccc---cccccCCCHHHHHHHcCCCHHHHHH
Q 048197 397 EGQL------IVVPQGFAVVKRA-S-NRGLEWISFKTN-DVA--KTSQLAGR---ASVIRGLPLDVIQNSFQVSRDEAQR 462 (480)
Q Consensus 397 ~GdV------~vVPqg~~~~~~a-g-~e~l~~v~f~ts-~~~--~~~~LAG~---~svl~~lp~eVla~af~vs~e~~~~ 462 (480)
+||| ++||+|.+||+.| + +++|.+|+++.+ .++ ..++|+|. .|||+++|.+||++||+++.+++++
T Consensus 100 ~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~~~~~vLa~af~v~~~~v~~ 179 (397)
T 2phl_A 100 TSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEEINR 179 (397)
T ss_dssp ESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGGSCHHHHHHHHTSCHHHHHH
T ss_pred CCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhcCCHHHHHHHhCCCHHHHHh
Confidence 9999 9999999999855 6 689999987653 334 45789885 5799999999999999999999999
Q ss_pred HHhcC---CCeEEeCCC
Q 048197 463 LKYNR---QELTVFTPG 476 (480)
Q Consensus 463 l~~~q---~e~~i~~p~ 476 (480)
|+.++ ++.+|+.+.
T Consensus 180 l~~~~~~q~~~~Iv~~~ 196 (397)
T 2phl_A 180 VLFEEEGQQEGVIVNID 196 (397)
T ss_dssp HHTCSTTCBSSSEEECC
T ss_pred hhhcccccccCceEEcC
Confidence 99555 367888543
No 25
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.90 E-value=1.7e-23 Score=222.35 Aligned_cols=166 Identities=17% Similarity=0.297 Sum_probs=138.1
Q ss_pred cCccccc-ccCCCCCC--cceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEE
Q 048197 42 QTQCNIQ-DLNALEPQ--QRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGA 116 (480)
Q Consensus 42 ~~~C~~~-~L~a~eP~--~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~ 116 (480)
.+.|.+. +.|...|. ..+...+|.+...|..+ |.|+.+||++++++|.|||++.|||| +|+||+||++|++++++
T Consensus 351 et~c~~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~ 430 (531)
T 3fz3_A 351 ETFCSLRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQV 430 (531)
T ss_dssp GTGGGCCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEE
T ss_pred cccccceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEE
Confidence 3568765 56666555 46788899999999876 99999999999999999999999998 59999999999999999
Q ss_pred EcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeee
Q 048197 117 VFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFY 196 (480)
Q Consensus 117 v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~ 196 (480)
|.+.+...| ..+|++||||+||+|++||.. .+++.+++++|.+..| +...+
T Consensus 431 V~~~G~~v~--------------------~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~n--------p~~~~ 481 (531)
T 3fz3_A 431 VNENGDAIL--------------------DQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEEN--------AFINT 481 (531)
T ss_dssp ECTTSCEEE--------------------EEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTT--------CCEEE
T ss_pred EeCCCcEEE--------------------EEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCC--------Cccee
Confidence 987544333 479999999999999999876 4678888886543233 24568
Q ss_pred ecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEE
Q 048197 197 LGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIV 268 (480)
Q Consensus 197 LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv 268 (480)
|||. ++||+++|++|||+||+|+.+++++|++.+++ ..|+
T Consensus 482 LaG~-------------------------------~svf~~lP~eVLa~aF~v~~e~v~kLk~~~~e-s~i~ 521 (531)
T 3fz3_A 482 LAGR-------------------------------TSFLRALPDEVLANAYQISREQARQLKYNRQE-TIAL 521 (531)
T ss_dssp SSST-------------------------------TCHHHHSCHHHHHHHHTCCHHHHHHHHHSCCC-SSEE
T ss_pred ccch-------------------------------hHHHHhCCHHHHHHHhCcCHHHHHHHHhcCCC-ceEE
Confidence 8885 58999999999999999999999999988765 4665
No 26
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.90 E-value=2.5e-23 Score=219.10 Aligned_cols=173 Identities=17% Similarity=0.213 Sum_probs=136.9
Q ss_pred cccccccCCCCCCcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEEcCCC
Q 048197 44 QCNIQDLNALEPQQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAVFPGC 121 (480)
Q Consensus 44 ~C~~~~L~a~eP~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg~ 121 (480)
.|.+ +|...+| .+.+++|.+..++..+ |.|+++|+++++++|.|||++.|||| +|+||+||++|+|++++|.+++
T Consensus 231 ~~~~-~l~~~~p--~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g 307 (434)
T 2ea7_A 231 DEPF-NLRNSKP--IYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSD 307 (434)
T ss_dssp SSCE-ETTSSCC--SEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEE
T ss_pred ccce-eeccCCC--ceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCc
Confidence 4644 4666666 5789999999999866 99999999999999999999999998 5999999999999999998865
Q ss_pred ccchhhhhhccccccccccccccee--EeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecC
Q 048197 122 PETYQESQQRSSESQSRSQDQHQKV--RQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG 199 (480)
Q Consensus 122 ~etf~~~~~~~~~~~~~~~d~~qk~--~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG 199 (480)
.. . .++ +..+..-++ .+|++|||++||+|++||++|. ++|.++++.+.+.+ +...+|||
T Consensus 308 ~~-~--~~~-------~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~-------~~~~~laG 368 (434)
T 2ea7_A 308 QQ-Q--QKQ-------QEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAEN-------NRRNFLAG 368 (434)
T ss_dssp CC-C--CTT-------SCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTT-------CCEEESSS
T ss_pred cc-c--ccc-------cccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCC-------CCceeccc
Confidence 31 0 000 000111013 4999999999999999999998 47999988754321 24678998
Q ss_pred CCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEE
Q 048197 200 NPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVR 269 (480)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~ 269 (480)
+. ++||+++|+++|++||+++.+++++|+..+.+. +|+.
T Consensus 369 ~~------------------------------~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~-~~~~ 407 (434)
T 2ea7_A 369 GK------------------------------DNVMSEIPTEVLEVSFPASGKKVEKLIKKQSES-HFVD 407 (434)
T ss_dssp ST------------------------------TBGGGGSCHHHHHHHSSSCHHHHHHHHTTCCSC-SEEE
T ss_pred ch------------------------------hhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEEC
Confidence 31 689999999999999999999999999877543 6664
No 27
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.90 E-value=5e-23 Score=217.38 Aligned_cols=171 Identities=17% Similarity=0.228 Sum_probs=133.1
Q ss_pred cccccccCCCCCCcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEEcCCC
Q 048197 44 QCNIQDLNALEPQQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAVFPGC 121 (480)
Q Consensus 44 ~C~~~~L~a~eP~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg~ 121 (480)
.|.+ +|....| .+.+.+|.+..+|..+ |.|+++|+++++++|.|||++.|||| +|++|+||++|++++++|.|.+
T Consensus 246 ~~~~-~l~~~~p--~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~ 322 (445)
T 2cav_A 246 DKPF-NLRSRDP--IYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 322 (445)
T ss_dssp CCCE-ETTSSCC--SEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC--
T ss_pred ccce-eccccCC--CccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCC
Confidence 4644 5656677 5789999999999866 99999999999999999999999998 7999999999999999999875
Q ss_pred ccchhhhhhcccccccccccccc-eeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCC
Q 048197 122 PETYQESQQRSSESQSRSQDQHQ-KVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGN 200 (480)
Q Consensus 122 ~etf~~~~~~~~~~~~~~~d~~q-k~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~ 200 (480)
.. ++ ++++ ..++ -..+|++|||++||+|++||++|. +++.++++.. ++.. +...+|||+
T Consensus 323 ~~------~~-~~~g----~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~-~~~~------~~~~~laG~ 382 (445)
T 2cav_A 323 QQ------QQ-GLES----MQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGV-NAEN------NERNFLAGH 382 (445)
T ss_dssp --------------------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEE-SCTT------CCEEESSSS
T ss_pred cc------cc-cccC----cceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEc-cCCC------CCcEEcccc
Confidence 31 00 0001 1111 146899999999999999999998 4688888653 2211 246889983
Q ss_pred CCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEE
Q 048197 201 PQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIV 268 (480)
Q Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv 268 (480)
. ++||+++|+++|++||+++.+++++|+..+.+. .|+
T Consensus 383 ~------------------------------~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~-~~~ 419 (445)
T 2cav_A 383 K------------------------------ENVIRQIPRQVSDLTFPGSGEEVEELLENQKES-YFV 419 (445)
T ss_dssp T------------------------------TBSGGGSCHHHHHHHSSSCHHHHHHHHHHCCSC-SEE
T ss_pred h------------------------------hhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEe
Confidence 1 689999999999999999999999999777542 555
No 28
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.89 E-value=9.8e-23 Score=193.36 Aligned_cols=144 Identities=15% Similarity=0.260 Sum_probs=129.2
Q ss_pred cccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecC--CceEEeeecCCcc
Q 048197 322 AYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAEN--GENVFDGQIREGQ 399 (480)
Q Consensus 322 ~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~--G~~~f~~~l~~Gd 399 (480)
..++.|+.++.++..++|.|+++++++.+++|.||++..||||+++.|++||++|++++++++.+ |.+++...|++||
T Consensus 48 ~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD 127 (201)
T 1fi2_A 48 TSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGE 127 (201)
T ss_dssp CCSTTSEEEEEESTTTCGGGTTSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTC
T ss_pred ccCCCCcEEEEEecccCCCcccCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCC
Confidence 34566788999999999999999999999999999999999999999999999999999999875 3455566899999
Q ss_pred EEEECCCcEEEEEc-CCCCeEEEEEEecCCCcceeeccccccccC---CCHHHHHHHcCCCHHHHHHHHhcC
Q 048197 400 LIVVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRG---LPLDVIQNSFQVSRDEAQRLKYNR 467 (480)
Q Consensus 400 V~vVPqg~~~~~~a-g~e~l~~v~f~ts~~~~~~~LAG~~svl~~---lp~eVla~af~vs~e~~~~l~~~q 467 (480)
+++||+|.+|++.+ ++++++++++.++.++....++ .++|+. +|.+||+++|+++.+++++|+++.
T Consensus 128 ~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~~~~~--~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 128 TFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVP--LTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEEEESSSCCCCEEHH--HHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred EEEECCCCeEEEEeCCCCCEEEEEEECCCCCCeEehh--hHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 99999999999855 6889999999988899888887 568886 999999999999999999998764
No 29
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.89 E-value=4.3e-23 Score=220.08 Aligned_cols=148 Identities=20% Similarity=0.372 Sum_probs=128.2
Q ss_pred cccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCC--------------
Q 048197 322 AYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENG-------------- 387 (480)
Q Consensus 322 ~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G-------------- 387 (480)
.+.+++|.+..++..+ |.|+++|+++++++|.||||+.||||+ +++|+||++|+|++++++|++
T Consensus 22 ~~~se~G~~e~~~~~~-~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~ 99 (493)
T 2d5f_A 22 RVESEGGLIETWNSQH-PELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRR 99 (493)
T ss_dssp EEECSSEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC------
T ss_pred eeecCCcEEEEeCCCC-hhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccc
Confidence 5778999999988665 999999999999999999999999995 789999999999999997753
Q ss_pred ------------ceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEEEecC---C-----Ccceeeccc---------
Q 048197 388 ------------ENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTND---V-----AKTSQLAGR--------- 437 (480)
Q Consensus 388 ------------~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f~ts~---~-----~~~~~LAG~--------- 437 (480)
++++ +|++|||++||+|++||+.| ++++|++|++++.. | +..++|||.
T Consensus 100 ~~~~~~~~~d~~qkv~--~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~ 177 (493)
T 2d5f_A 100 GSRSQQQLQDSHQKIR--HFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETM 177 (493)
T ss_dssp -------CSEEESCEE--EEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGT
T ss_pred ccccccccccccceEE--EecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhh
Confidence 1244 79999999999999999865 68899999987643 3 356789983
Q ss_pred ------------------------cccccCCCHHHHHHHcCCCHHHHHHHHhcCC-CeEEe
Q 048197 438 ------------------------ASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQ-ELTVF 473 (480)
Q Consensus 438 ------------------------~svl~~lp~eVla~af~vs~e~~~~l~~~q~-e~~i~ 473 (480)
++||++|+.+|||.||+|+.+++++|+..+. ...|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv 238 (493)
T 2d5f_A 178 QQQQQQKSHGGRKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIV 238 (493)
T ss_dssp C---------------------CCCCGGGGSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEE
T ss_pred hhcccccccccccccccccccccccchhhcCCHHHHHhHhCCCHHHHHHhhhcccCcccEE
Confidence 4899999999999999999999999998776 44566
No 30
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.88 E-value=3.1e-22 Score=213.51 Aligned_cols=165 Identities=16% Similarity=0.234 Sum_probs=137.5
Q ss_pred Cccccc-ccCCCCC--CcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEE
Q 048197 43 TQCNIQ-DLNALEP--QQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAV 117 (480)
Q Consensus 43 ~~C~~~-~L~a~eP--~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v 117 (480)
..|-+. +.|..+| ...+...+|.+...+..+ |.|+..++++++++|.||++..||||. +.||+||++|+++++++
T Consensus 330 ~~c~~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv 409 (510)
T 3c3v_A 330 TICTATVKKNIGRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVV 409 (510)
T ss_dssp TGGGCCCEEECSSCSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEE
T ss_pred cccceeeeeccCccccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEE
Confidence 348654 3344433 347899999999999866 999999999999999999999999995 99999999999999999
Q ss_pred cCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeee
Q 048197 118 FPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL 197 (480)
Q Consensus 118 ~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~L 197 (480)
.+.+.++| ...|++||||+||+|++||+.| ++++++++++.+..| +...+|
T Consensus 410 ~~~G~~~~--------------------~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~--------p~~~~L 460 (510)
T 3c3v_A 410 DSNGNRVY--------------------DEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSR--------PSIANL 460 (510)
T ss_dssp CTTSCEEE--------------------EEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSS--------CCEEES
T ss_pred eCCCCEEE--------------------eEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCC--------cceeec
Confidence 87543433 3579999999999999999999 889999999875544 346788
Q ss_pred cCCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEE
Q 048197 198 GGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIV 268 (480)
Q Consensus 198 aG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv 268 (480)
||. ++||+.+|+++|++||+++.+++++|+....+ .+|+
T Consensus 461 aG~-------------------------------~svf~~lp~eVla~aF~v~~e~v~~L~~~~~e-~~i~ 499 (510)
T 3c3v_A 461 AGE-------------------------------NSVIDNLPEEVVANSYGLPREQARQLKNNNPF-KFFV 499 (510)
T ss_dssp SST-------------------------------TSTTTTSCHHHHHHHHTCCHHHHHHHHHSCCC-SSEE
T ss_pred ccH-------------------------------hHHHHhCCHHHHHHHHCcCHHHHHHHHhhCCC-cEEE
Confidence 885 68999999999999999999999999977654 3555
No 31
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.88 E-value=6.2e-22 Score=210.43 Aligned_cols=164 Identities=15% Similarity=0.246 Sum_probs=137.0
Q ss_pred ccccc-ccCCCCCC--cceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEc
Q 048197 44 QCNIQ-DLNALEPQ--QRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVF 118 (480)
Q Consensus 44 ~C~~~-~L~a~eP~--~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~ 118 (480)
.|.+. +.|..+|. ..+...+|.+...+..+ |.|+..++++++++|.||++..||||. +.||+||++|+++++++.
T Consensus 297 ~~~~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~ 376 (476)
T 1fxz_A 297 ICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVN 376 (476)
T ss_dssp CTTCCCEEECSSSSCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEEC
T ss_pred ccceeeeccccccccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEe
Confidence 47654 33444443 47899999999999866 999999999999999999999999995 999999999999999998
Q ss_pred CCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeec
Q 048197 119 PGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLG 198 (480)
Q Consensus 119 pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~La 198 (480)
+.+.++| ...|++|||++||+|++||+.| |+++++++++.+..|+ ...+||
T Consensus 377 ~~G~~~~--------------------~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p--------~~~~la 427 (476)
T 1fxz_A 377 CNGERVF--------------------DGELQEGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTP--------MIGTLA 427 (476)
T ss_dssp TTSCEEE--------------------EEEEETTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSC--------CEEESS
T ss_pred cCCCEEe--------------------eeEEcCCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCC--------ceeEcc
Confidence 7543333 3569999999999999999999 8899999998755443 456888
Q ss_pred CCCCcCccccccccCccccCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEE
Q 048197 199 GNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIV 268 (480)
Q Consensus 199 G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv 268 (480)
|. ++||+++|.++|++||+++.+++++|+....+ .+|+
T Consensus 428 G~-------------------------------~s~~~~~p~~Vla~af~~~~~~v~~l~~~~~e-~~i~ 465 (476)
T 1fxz_A 428 GA-------------------------------NSLLNALPEEVIQHTFNLKSQQARQIKNNNPF-KFLV 465 (476)
T ss_dssp ST-------------------------------TCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCC-SSEE
T ss_pred ch-------------------------------hHHHHhCCHHHHHHHhCcCHHHHHHHHhhCCC-cEEe
Confidence 85 68999999999999999999999999976654 2554
No 32
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.85 E-value=3.2e-21 Score=161.35 Aligned_cols=86 Identities=28% Similarity=0.456 Sum_probs=81.3
Q ss_pred eEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-CCcceeecc-ccccccCCCHHHHHHHcCCCHHHHHHHHhc
Q 048197 389 NVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND-VAKTSQLAG-RASVIRGLPLDVIQNSFQVSRDEAQRLKYN 466 (480)
Q Consensus 389 ~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~-~~~~~~LAG-~~svl~~lp~eVla~af~vs~e~~~~l~~~ 466 (480)
+.++++|++||||||||||+++++|++ +|+||+|+|++ ++++++||| ++|+|++||.+||++||+++.+++++|+.+
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~-~le~v~F~tna~~~~~~~LAG~~~Svl~~l~~evla~aF~~s~ee~~~l~~~ 82 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS-DLNMVGIGVNAENNERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEELLEN 82 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS-SEEEEEEEESCTTCCEEESSSSTTBSTTTSCHHHHHHHSSSCTHHHHHHTTS
T ss_pred chhhceecCCcEEEECCCCceeEEecC-CeEEEEEEecCCCCeeeeccCCcccHHHhCCHHHHHHHcCCCHHHHHHHHhc
Confidence 357889999999999999999999986 69999999998 899999999 999999999999999999999999999999
Q ss_pred CCCeEEeCC
Q 048197 467 RQELTVFTP 475 (480)
Q Consensus 467 q~e~~i~~p 475 (480)
|++++|++.
T Consensus 83 q~e~~~~~~ 91 (93)
T 1dgw_Y 83 QKESYFVDG 91 (93)
T ss_dssp CCCCSEECC
T ss_pred CCCceeccC
Confidence 999998864
No 33
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.85 E-value=5.7e-21 Score=196.36 Aligned_cols=239 Identities=16% Similarity=0.155 Sum_probs=153.5
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
..+.+..++|.||+...||+|+..+++||++|+|.++.|. . +...+++||+|+||
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~--g-----------------------~~~~l~~GD~~~iP 152 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVD--G-----------------------ERTPMNEGDFILTP 152 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEET--T-----------------------EEEECCTTCEEEEC
T ss_pred CcEEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEEC--C-----------------------EEEEEcCCCEEEEC
Confidence 3678889999999999999999999999999999886652 1 25799999999999
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccC
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGF 238 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf 238 (480)
+|..|++.|+++++++++++.|..-..+ |+ | .++..+
T Consensus 153 ~g~~H~~~n~~~~~~~~l~v~d~p~~~~-l~-----~-------------------------------------~~~~~~ 189 (354)
T 2d40_A 153 QWRWHDHGNPGDEPVIWLDGLDLPLVNI-LG-----C-------------------------------------GFAEDY 189 (354)
T ss_dssp TTSCEEEECCSSSCEEEEEEECHHHHHH-HT-----C-------------------------------------CCEEEC
T ss_pred CCCcEEeEeCCCCCEEEEEEECchhHhh-cC-----c-------------------------------------eeeecC
Confidence 9999999999999999988875421110 11 0 011111
Q ss_pred CHHHHHhhcCCCHHHHHHhccccccceeEEEeccceec-cCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCCC
Q 048197 239 DERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRV-LSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDP 317 (480)
Q Consensus 239 ~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~-~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p 317 (480)
+.++... ..+.....++.+ +.++.++.. +. .+|...=..++... .+. .+.+-
T Consensus 190 ~~~~~~~--~~p~~~~~~~~~-----~~~~p~~~~-~~~~sp~~~y~~~~~~~------------------~l~-~~~~~ 242 (354)
T 2d40_A 190 PEEQQPV--TRKEGDYLPRYA-----ANMLPLRHQ-TGNSSPIFNYRYDRSRE------------------VLH-DLTRL 242 (354)
T ss_dssp C--CCCC--CSCTTTHHHHHS-----SSEECSSCC-CCSSCSCCEECHHHHHH------------------HHH-HHHTT
T ss_pred ccccCcC--cCCcchhhhhhc-----cCCCCcccc-ccCCCcceeccHHHHHH------------------HHH-hhhhc
Confidence 2111110 011111111111 122222110 00 01100000000000 010 00000
Q ss_pred CCCCcccCCCeEEEEEecC-CCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecC
Q 048197 318 SGADAYNPRGGRVTTVNRF-NLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIR 396 (480)
Q Consensus 318 ~~~~~~~~~~G~i~~~~~~-~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~ 396 (480)
+..+ ...|+.+..+|+. .++++.+ |++..+.|.||++..||||+++ +|.||++|+|+++| +| ..+ +++
T Consensus 243 ~~~~--~~~G~~~~~~np~t~~~~~~t--i~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v---~~-~~~--~~~ 311 (354)
T 2d40_A 243 GDAD--EWDGYKMRYVNPVTGGYPMPS--MGAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII---GN-ETF--SFS 311 (354)
T ss_dssp SCCB--TTTBEEEEECCTTTSSCSSSS--CEEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE---TT-EEE--EEE
T ss_pred cccC--CCCCeEEEEeCCCcCCCCCCc--ceeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE---CC-EEE--EEc
Confidence 1111 1247788888854 6778876 7788889999999999999999 99999999999999 34 445 699
Q ss_pred CccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 397 EGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 397 ~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+||+++||.+..|.+.|. +++.+++|.
T Consensus 312 ~GD~~~vP~~~~H~~~n~-e~~~l~~~~ 338 (354)
T 2d40_A 312 AKDIFVVPTWHGVSFQTT-QDSVLFSFS 338 (354)
T ss_dssp TTCEEEECTTCCEEEEEE-EEEEEEEEE
T ss_pred CCCEEEECCCCeEEEEeC-CCEEEEEEc
Confidence 999999999999998773 678888885
No 34
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.84 E-value=1.8e-21 Score=158.63 Aligned_cols=71 Identities=17% Similarity=0.297 Sum_probs=66.9
Q ss_pred CCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCc
Q 048197 318 SGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGE 388 (480)
Q Consensus 318 ~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~ 388 (480)
++.|+|++..|+++.+++.+||+|++++||+++++|++|||+.|||||+|+||+||++|+++++||+++|+
T Consensus 8 ~~~p~~~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 8 SRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp SSCCSEECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred cCCCCccCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 46778999999999999999999999999999999999999999999999999999999999999999985
No 35
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.84 E-value=1.6e-20 Score=192.08 Aligned_cols=145 Identities=14% Similarity=0.290 Sum_probs=124.8
Q ss_pred ccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCc-eEEeeecCCccEE
Q 048197 323 YNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGE-NVFDGQIREGQLI 401 (480)
Q Consensus 323 ~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~-~~f~~~l~~GdV~ 401 (480)
+...+|+++.+++.+||++.. +++.++.|.||++..||||++++|+.||++|++++++++++|+ ..+ .|++||++
T Consensus 31 ~~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~--~l~~GD~~ 106 (361)
T 2vqa_A 31 VLYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIA--DVDKGGLW 106 (361)
T ss_dssp EEETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEE--EEETTEEE
T ss_pred eecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEE--EEcCCCEE
Confidence 345899999999999999874 7999999999999999999999999999999999999999885 333 79999999
Q ss_pred EECCCcEEEEEc-CCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEe
Q 048197 402 VVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVF 473 (480)
Q Consensus 402 vVPqg~~~~~~a-g~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~~~q~e~~i~ 473 (480)
+||+|.+|+..| ++++++|+.+++..++......+.++||+++|.++|+++|+++.+.+++|+..+. .|+
T Consensus 107 ~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~p~~vLa~~~~v~~~~~~~l~~~~~--~i~ 177 (361)
T 2vqa_A 107 YFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDWLSHTPIAWVEENLGWTAAQVAQLPKKQV--YIS 177 (361)
T ss_dssp EECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHHHHTSCHHHHHHHHTCCHHHHTTSCSSCC--CEE
T ss_pred EECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHHHHhCCHHHHHHHhCcCHHHHHhccccCc--eEE
Confidence 999999999866 5689999998877766532111237999999999999999999999999987643 455
No 36
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.79 E-value=1.3e-18 Score=164.85 Aligned_cols=139 Identities=18% Similarity=0.247 Sum_probs=114.1
Q ss_pred cCCceEEEeC-CCChhccccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCC--Cccchhhhhhcccccc
Q 048197 61 SEAGVTEFWD-QNDEQLQCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPG--CPETYQESQQRSSESQ 136 (480)
Q Consensus 61 se~G~~e~~~-~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg--~~etf~~~~~~~~~~~ 136 (480)
..++.+...+ ...|.+.+.|+++.++++.||++..||||. +.|++||++|++.++++.++ +.+.
T Consensus 51 ~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~------------ 118 (201)
T 1fi2_A 51 PNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKL------------ 118 (201)
T ss_dssp TTSEEEEEESTTTCGGGTTSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCE------------
T ss_pred CCCcEEEEEecccCCCcccCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeE------------
Confidence 3455455544 556999999999999999999999999997 68999999999999998653 0110
Q ss_pred cccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccc
Q 048197 137 SRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRY 216 (480)
Q Consensus 137 ~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 216 (480)
....|++||+++||+|++||++|.|+++++++++++..++. ...++
T Consensus 119 --------~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~--------~~~~~------------------ 164 (201)
T 1fi2_A 119 --------YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG--------IVFVP------------------ 164 (201)
T ss_dssp --------EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC--------CEEHH------------------
T ss_pred --------EEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC--------eEehh------------------
Confidence 15799999999999999999999999999999998766542 22332
Q ss_pred cCCCCCCCCCcccccCccccc---CCHHHHHhhcCCCHHHHHHhccc
Q 048197 217 QGSQGGEGGDRSRRGGNLFRG---FDERLLAEAFNVNPDLISKLQRP 260 (480)
Q Consensus 217 ~g~~~~~~~~~~~~~~ni~~g---f~~~~La~af~v~~~~~~kl~~~ 260 (480)
.++|+. +++++|+++|+++.+++++|+++
T Consensus 165 ---------------~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~ 196 (201)
T 1fi2_A 165 ---------------LTLFGSDPPIPTPVLTKALRVEAGVVELLKSK 196 (201)
T ss_dssp ---------------HHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred ---------------hHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHh
Confidence 457876 99999999999999999999864
No 37
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.73 E-value=1e-16 Score=161.40 Aligned_cols=249 Identities=11% Similarity=0.058 Sum_probs=146.7
Q ss_pred cCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
..+.+..+++.||+...+|||. ..|++||++|++.+.+ +. +...|++||+++|
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~-----------------------~~~~l~~Gd~~~~ 97 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DG-----------------------ERYLLISGDYANI 97 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TT-----------------------EEEEECTTCEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CC-----------------------EEEEECCCCEEEE
Confidence 4788899999999998899998 9999999999999985 21 2479999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCccccc
Q 048197 158 PTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRG 237 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~g 237 (480)
|+|++|.+.|.++ ++.++.+++... +..||....... .+. ..+..+...
T Consensus 98 p~~~~H~~~n~~~-~~~~~~~~~p~~--------~~~~~~~~~~~~-------------~~~---------~~p~~~~~~ 146 (337)
T 1y3t_A 98 PAGTPHSYRMQSH-RTRLVSYTMKGN--------VAHLYSVIGNPY-------------DHA---------EHPPYASEE 146 (337)
T ss_dssp CTTCCEEEEECST-TEEEEEEEETTS--------STHHHHHHSEEC-------------SCS---------SCCSSCCCC
T ss_pred CCCCcEEEEECCC-CeEEEEEECCCC--------HHHHHHHhCccc-------------ccc---------cCCCCCCcc
Confidence 9999999999987 577777766543 233443221000 000 000000011
Q ss_pred CCHHHHHhhcCCCHHHHHHhccccccceeEEEeccc-eeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCC
Q 048197 238 FDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEE-LRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNIND 316 (480)
Q Consensus 238 f~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~-l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~ 316 (480)
++.+. +.++...- |..+ +... ...+.|.. ..+.+.+..-++-++.
T Consensus 147 ~~~~~-----------l~~~a~~~---gv~~-~~~~~~~~~~~~~---------------~~~~l~~~~~~~v~r~---- 192 (337)
T 1y3t_A 147 VSNER-----------FAEAAAVA---TIVF-LDEAKPACSAKLA---------------ELTELPDGAVPYVLES---- 192 (337)
T ss_dssp CTTCT-----------TGGGTSSC---EECC-CCCCCSSCSCEEC---------------CBCSCCSSSCCEEECT----
T ss_pred cCHHH-----------HHHhHhhc---cEEE-cCCCCccccccch---------------hhhcCCCCCCCEEECC----
Confidence 11111 11111111 1111 1100 00000100 0011111111111111
Q ss_pred CCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecc-ccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeec
Q 048197 317 PSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQ-NAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQI 395 (480)
Q Consensus 317 p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~p-gam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l 395 (480)
...+.+...+..++.+.+.. .....+ +..+.+.| |+...+|||++..|+.||++|++++.+ +| ..+ .|
T Consensus 193 -~~~~~~~~~g~~~~~l~~~~---~~~~~~-~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i---~~-~~~--~l 261 (337)
T 1y3t_A 193 -GEGDRLLTGDQLHRIVAAQK---NTDGQF-IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT---DG-QEI--QL 261 (337)
T ss_dssp -TCSEEEEETTEEEEEEECGG---GTTTSC-EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE---TT-EEE--EE
T ss_pred -CCcCEEEECCcEEEEEeccc---ccCCcE-EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE---CC-EEE--EE
Confidence 12223333455666665421 122223 44556666 677889999989999999999999988 33 334 69
Q ss_pred CCccEEEECCCcEEEEEcCCCCeEEEEEEecCCC
Q 048197 396 REGQLIVVPQGFAVVKRASNRGLEWISFKTNDVA 429 (480)
Q Consensus 396 ~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~~~ 429 (480)
++||+++||.+.+|...|..+.+.++.+.+.+..
T Consensus 262 ~~GD~~~ip~~~~H~~~n~~~~~~~l~v~~~~~~ 295 (337)
T 1y3t_A 262 NPGDFLHVPANTVHSYRLDSHYTKMVGVLVPGLF 295 (337)
T ss_dssp CTTCEEEECTTCCEEEEECSSSEEEEEEEESSTT
T ss_pred CCCCEEEECCCCeEEEEECCCCeEEEEEEcCccH
Confidence 9999999999999998664338998888765543
No 38
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.71 E-value=1.8e-17 Score=171.01 Aligned_cols=139 Identities=24% Similarity=0.363 Sum_probs=118.2
Q ss_pred cCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE
Q 048197 324 NPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV 403 (480)
Q Consensus 324 ~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV 403 (480)
...+|+++.++..+||.+. ++++.++.|.||++..||||+ +.||+||++|++++++++.+|+.. ...|++||+++|
T Consensus 59 ~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~-~~~l~~GD~~~i 134 (385)
T 1j58_A 59 LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSF-IDDVGEGDLWYF 134 (385)
T ss_dssp EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEE-EEEEETTEEEEE
T ss_pred ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEE-EEEeCCCCEEEE
Confidence 3589999999999999988 699999999999999999999 899999999999999999888753 237999999999
Q ss_pred CCCcEEEEEcCCCCeEEEEEEecCCCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHHhc
Q 048197 404 PQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYN 466 (480)
Q Consensus 404 Pqg~~~~~~ag~e~l~~v~f~ts~~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~~~ 466 (480)
|+|.+|+..+..++++|+.+++........-...++||+.+|.++|+++|+++.+++++|+..
T Consensus 135 p~g~~H~~~n~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~evla~~~~vs~~~~~~l~~~ 197 (385)
T 1j58_A 135 PSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGK 197 (385)
T ss_dssp CTTCCEEEEEEEEEEEEEEEESCTTCCGGGEEEHHHHHHTSCHHHHHHHHTCCTGGGTTSCSS
T ss_pred CCCCeEEEEECCCCEEEEEEECCCCccccchhhhhhhhhcccHHHHHHHhCCCHHHHHhcccc
Confidence 999999987654569999877666553221111279999999999999999999999998763
No 39
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.65 E-value=6.3e-15 Score=153.08 Aligned_cols=243 Identities=14% Similarity=0.136 Sum_probs=144.7
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
+..+.+...+|.||....+|.|...++.||++|+|.+..+. | +...+++||+|++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~-G------------------------~~~~~~~GD~i~~ 174 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVD-G------------------------HKVELGANDFVLT 174 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEET-T------------------------EEEEECTTCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEEC-C------------------------EEEEEcCCCEEEE
Confidence 34677899999999999999999889999999999776552 1 2469999999999
Q ss_pred CCCCEEEEEc-CCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCcccc
Q 048197 158 PTGSANWIYN-DGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFR 236 (480)
Q Consensus 158 PaG~~h~~~N-~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~ 236 (480)
|+|..|++.| +|+++|++++++|.---. .||-. |+=-+. ... + .+
T Consensus 175 P~g~~H~~~N~~gde~l~~l~v~d~Pl~~-~l~~~---f~e~~~-~~~---------------~------------~~-- 220 (394)
T 3bu7_A 175 PNGTWHEHGILESGTECIWQDGLDIPLTN-CLEAN---FYEVHP-NDY---------------Q------------TT-- 220 (394)
T ss_dssp CTTCCEEEEECTTCCCEEEEEEECHHHHH-HTTCC---CEEECT-TSS---------------C------------CC--
T ss_pred CcCCCEEEEcCCCCCCEEEEEcccchhhh-hcCcc---ccccCc-ccc---------------c------------Cc--
Confidence 9999999999 999999999988743221 12211 211110 000 0 00
Q ss_pred cCCHHHHHhhcCCCHHHHHHhccccccceeEEEecccee-ccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCC
Q 048197 237 GFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELR-VLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNIN 315 (480)
Q Consensus 237 gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~-~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~ 315 (480)
.-+..--...|+ . +.+..+....+ .-+|...=.+++-+. -|.+ +... .
T Consensus 221 ~~~~~~~~~~~~-----------~----~~l~p~~~~~~~~~sP~~~y~w~~~~~---------~L~~------~~~~-~ 269 (394)
T 3bu7_A 221 DIPLNDSPLTYG-----------G----PALLPQLDKWDKPYSPLLKYSWEPTYE---------ALLN------YAKA-S 269 (394)
T ss_dssp CCCTTHHHHHHC-----------S----TTEEESSCCCCCSSCSCCEECHHHHHH---------HHHH------HHTT-C
T ss_pred cCCccchhhhhc-----------C----cccccccccccCCCCCcEEecHHHHHH---------HHHH------hhhc-c
Confidence 000000001111 0 11111110000 001110000000000 0000 0000 0
Q ss_pred CCCCCCcccCCCeE-EEEEecCCC-CcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEee
Q 048197 316 DPSGADAYNPRGGR-VTTVNRFNL-PILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDG 393 (480)
Q Consensus 316 ~p~~~~~~~~~~G~-i~~~~~~~~-P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~ 393 (480)
.+ ....|+ +..+|+.+= .... .|++....|.||+-..||-|+.. ++.||++|+|.+.| +|++ +
T Consensus 270 ---~~---~~~~~~~l~l~nP~~g~~~~~--tl~~~~~~l~PG~~~~~HrH~~~-~v~~VleG~G~~~V---~ge~-~-- 334 (394)
T 3bu7_A 270 ---DG---SPYDGLILRYTNPQTGGHPML--TMGASMQMLRPGEHTKAHRHTGN-VIYNVAKGQGYSIV---GGKR-F-- 334 (394)
T ss_dssp ---CC---BTTTBEEEEECCTTTSSCSSS--SCEEEEEEECTTCBCCCEEESSC-EEEEEEECCEEEEE---TTEE-E--
T ss_pred ---Cc---CcCCceEEEEeCCCCCCCCCC--eeeEEEEEECCCCcCCCcccCCc-EEEEEEeCeEEEEE---CCEE-E--
Confidence 00 111232 333343321 1222 48899999999999999999854 79999999997766 4443 4
Q ss_pred ecCCccEEEECCCcEEEEEc-C-CCCeEEEEEEe
Q 048197 394 QIREGQLIVVPQGFAVVKRA-S-NRGLEWISFKT 425 (480)
Q Consensus 394 ~l~~GdV~vVPqg~~~~~~a-g-~e~l~~v~f~t 425 (480)
++++||+++||.|..|...| + ++++.+++|.+
T Consensus 335 ~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 335 DWSEHDIFCVPAWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp EECTTCEEEECTTCCEEEEECCSSCCEEEEEEES
T ss_pred EEeCCCEEEECCCCeEEeEeCCCCCCeEEEEeeC
Confidence 69999999999999998754 6 68899999963
No 40
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.61 E-value=4.6e-14 Score=138.48 Aligned_cols=195 Identities=14% Similarity=0.107 Sum_probs=132.3
Q ss_pred ccCeeEEEEEEcCCeeecCccc--CCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYT--NTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~--~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...+.+..++|.||+-..++++ ...+++||++|++.+.+ +. +.+.|++||.+
T Consensus 56 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~-----------------------~~~~L~~Gd~~ 109 (261)
T 1rc6_A 56 GASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EG-----------------------KTFALSEGGYL 109 (261)
T ss_dssp TCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TT-----------------------EEEEEETTEEE
T ss_pred CCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CC-----------------------EEEEECCCCEE
Confidence 3467788999999997665543 36789999999999986 22 25799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCccc
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLF 235 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~ 235 (480)
++|+|.+|.+.|.+++++.++.+.....+ +
T Consensus 110 ~~~~~~~H~~~N~~~~~~~~l~v~~~~~~------------~-------------------------------------- 139 (261)
T 1rc6_A 110 YCPPGSLMTFVNAQAEDSQIFLYKRRYVP------------V-------------------------------------- 139 (261)
T ss_dssp EECTTCCCEEEECSSSCEEEEEEEEECCC------------C--------------------------------------
T ss_pred EECCCCCEEEEeCCCCCEEEEEEEecccc------------C--------------------------------------
Confidence 99999999999999999988877421110 0
Q ss_pred ccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCC
Q 048197 236 RGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNIN 315 (480)
Q Consensus 236 ~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~ 315 (480)
.|..+ + -.|+..++ +.+... .|
T Consensus 140 ~g~~p---------------------~--~~v~~~~~----~~~~~~----------------~~--------------- 161 (261)
T 1rc6_A 140 EGYAP---------------------W--LVSGNASE----LERIHY----------------EG--------------- 161 (261)
T ss_dssp TTCCC---------------------C--CEEEEGGG----SCCC-----------------------------------
T ss_pred CCCCC---------------------c--eEEcCHHH----CCcccC----------------CC---------------
Confidence 01100 0 02222111 001000 00
Q ss_pred CCCCCCcccCCCe-EEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeee
Q 048197 316 DPSGADAYNPRGG-RVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQ 394 (480)
Q Consensus 316 ~p~~~~~~~~~~G-~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~ 394 (480)
.+| .++.+...+ ...++.+..+.|.||+...+|||+...|+.||++|++.+.+= |+ .+ .
T Consensus 162 ----------~~~~~~~~l~~~~----~~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~---~~-~~--~ 221 (261)
T 1rc6_A 162 ----------MDDVILLDFLPKE----LGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD---NN-WI--P 221 (261)
T ss_dssp -------------CEEEECSCCS----TTCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS---SC-EE--E
T ss_pred ----------CcceEEEEecCcc----cCCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC---CE-EE--E
Confidence 001 112121111 123578899999999999999999889999999999998862 33 33 6
Q ss_pred cCCccEEEECCCcEEEEEc-CC-CCeEEEEEEec
Q 048197 395 IREGQLIVVPQGFAVVKRA-SN-RGLEWISFKTN 426 (480)
Q Consensus 395 l~~GdV~vVPqg~~~~~~a-g~-e~l~~v~f~ts 426 (480)
|++||+++||++.+|...| ++ ++++++.+++.
T Consensus 222 l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~d~ 255 (261)
T 1rc6_A 222 VKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDC 255 (261)
T ss_dssp EETTCEEEECSSEEEEEEEC----CEEEEEEEEC
T ss_pred eCCCCEEEECCCCcEEeEeCCCCcCEEEEEEecC
Confidence 9999999999999998755 67 89999988753
No 41
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.58 E-value=5.5e-14 Score=144.03 Aligned_cols=258 Identities=10% Similarity=0.104 Sum_probs=142.6
Q ss_pred CeeEEEEEEcCCeeec---CcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 80 NVAVFRHRIQQRGLVV---PSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 80 gvs~~r~~i~p~gl~l---Ph~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
.+.+. .++.|++-.. ||||. ..|++||++|++.+.+-..+.. ++.+.|++||++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~---------------------~~~~~L~~GD~v 104 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNET---------------------QQTRVLSSGDYG 104 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSC---------------------CEEEEEETTCEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCc---------------------eEEEEECCCCEE
Confidence 45666 6777777655 79987 8999999999999987541111 135799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeec-CCCCcCccccccccCccccCCCCCCCCCcccccCcc
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLG-GNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNL 234 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~La-G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni 234 (480)
+||+|++|++.|.++++ .+++++.... +..||.. |.+. .+.
T Consensus 105 ~ip~g~~H~~~n~~~~~-~~l~v~~p~~--------~~~~f~~l~~~~-----------------------------~~~ 146 (350)
T 1juh_A 105 SVPRNVTHTFQIQDPDT-EMTGVIVPGG--------FEDLFYYLGTNA-----------------------------TDT 146 (350)
T ss_dssp EECTTEEEEEEECSTTE-EEEEEEESSC--------TTHHHHHHSEEC-----------------------------CCT
T ss_pred EECCCCcEEEEeCCCCC-EEEEEEcCcc--------HHHHHHHhcccc-----------------------------ccc
Confidence 99999999999998876 6666654332 2344432 2211 000
Q ss_pred cccCCHHHHHhhcCCCH--HHHHHhccccccceeEEEecc-cee-ccCCcccchhhHHHhhhhcCCCCCCCccceeccc-
Q 048197 235 FRGFDERLLAEAFNVNP--DLISKLQRPQMQKGIIVRVEE-ELR-VLSPQRGREQEQEQEQEFQGSGDNGIEETICTMK- 309 (480)
Q Consensus 235 ~~gf~~~~La~af~v~~--~~~~kl~~~~~~rg~Iv~v~~-~l~-~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~- 309 (480)
.+ ...+...|+... ...+++...-..-|.++..+. +.+ .+.-... . ...|..+ ..+
T Consensus 147 ~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~a~---------~-~~~w~~~------~~~~ 207 (350)
T 1juh_A 147 TH---TPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAP---------A-NTVWHTG------ANAL 207 (350)
T ss_dssp TC---CSSCCC--------------CGGGGGGTCEECTTCCCCCCCBTTEES---------S-SSCSSSS------CCCC
T ss_pred cc---cccCCcccccCccccCHHHHHHHHHHcCCEeccccCChhHhhccccc---------c-CCccccC------cccc
Confidence 00 111123333322 333343322222234443221 110 0000000 0 0001111 111
Q ss_pred cccCCCCCCCCCcc-cCCCeEEE---------EEecCCCCcccccceeEEeeeeccc--cccccccccCCceEEEEEEee
Q 048197 310 LKHNINDPSGADAY-NPRGGRVT---------TVNRFNLPILRYIQLSAEKGNLYQN--AMMAPHWNLNAHSVVYITRGN 377 (480)
Q Consensus 310 l~~ni~~p~~~~~~-~~~~G~i~---------~~~~~~~P~L~~l~lsa~~v~L~pg--am~~PHwh~nA~ei~yV~~G~ 377 (480)
|+ . +..+.| .++.|.-. ...-...+.++...+++..+.+.++ +...|+|+...++++||++|+
T Consensus 208 l~----~-~~~p~~~~~~~g~~~~~~~~g~v~~~~l~~~~~~~~~~f~~~~i~~~~~~~g~~~~~h~~~~~~~~~vleG~ 282 (350)
T 1juh_A 208 AS----T-AGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGR 282 (350)
T ss_dssp CS----S-TTCCEEECTTCSCEEEECTTSCEEEEEEECHHHHGGGCEEEEEEEECCCCTTSCCCCBCCSSCEEEEEEESC
T ss_pred cC----C-CCCceEECCCccchhhcccCCcEEEEEEEeCCcCceeEEEEEEEeeccccCCCCCCcccCCCcEEEEEEeeE
Confidence 11 1 122223 33333211 1111112334444678888888884 666777767899999999999
Q ss_pred EEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEec
Q 048197 378 GRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTN 426 (480)
Q Consensus 378 grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts 426 (480)
+++++-+. . .+ +|++||+++||+|.+|...+......++.+.+.
T Consensus 283 ~~i~i~g~--~-~~--~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~~g 326 (350)
T 1juh_A 283 VVVQIGDY--A-AT--ELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSG 326 (350)
T ss_dssp EEEEETTS--C-CE--EECTTCEEEECTTCCEEEEESSSSEEEEEEEES
T ss_pred EEEEECCe--E-EE--EeCCCCEEEECCCCCEEEEecCCeEEEEEEecC
Confidence 99999642 2 23 699999999999999999886544667777653
No 42
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.55 E-value=1.6e-13 Score=141.20 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=150.0
Q ss_pred EEEeCCCChh--ccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhccccccccccccc
Q 048197 66 TEFWDQNDEQ--LQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQH 143 (480)
Q Consensus 66 ~e~~~~~~~~--l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~ 143 (480)
+...++.... .-+..+.+...+|.||+...+|.|...++.||++|+|....|. |
T Consensus 86 ~~l~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vd-G----------------------- 141 (368)
T 3nw4_A 86 LGLANPGLGGNAYISPTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVN-G----------------------- 141 (368)
T ss_dssp EECCCTTSTTCSCSSSSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEET-T-----------------------
T ss_pred EEEeCCCCCCcCccCCceEEEEEEECCCCccCceecccceEEEEEecceEEEEEC-C-----------------------
Confidence 3445554322 1134678888899999999999999899999999999644442 2
Q ss_pred ceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCC
Q 048197 144 QKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGE 223 (480)
Q Consensus 144 qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~ 223 (480)
+...+++||+|++|+|..|.++|+|++++++++++|..-.. .|+-. |+-.+.... +.+
T Consensus 142 -~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~D~Pl~~-~l~~~---~~e~~~~~~--------------~~~--- 199 (368)
T 3nw4_A 142 -DPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGLDIPFSQ-QMDVG---FFEFGSDRV--------------TDY--- 199 (368)
T ss_dssp -EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEECHHHHH-HHTCC---CEEECCSSC--------------SCC---
T ss_pred -EEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEecchHHHh-hcCce---eeecccccc--------------ccc---
Confidence 24799999999999999999999999999999998854321 12222 222221000 000
Q ss_pred CCCcccccCcccccCCHHHHHhhc-CC-CHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCC
Q 048197 224 GGDRSRRGGNLFRGFDERLLAEAF-NV-NPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGI 301 (480)
Q Consensus 224 ~~~~~~~~~ni~~gf~~~~La~af-~v-~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ 301 (480)
+ .+ ..+..--...| ++ +.. ....... -.|++-. . ++-++ -|
T Consensus 200 -~-------~~--~~~~~~~~~~~~~l~P~~---~~~~~~~--sP~~~yp---------w----~~~~~---------aL 242 (368)
T 3nw4_A 200 -A-------TP--NFSRGERLWCHPGLRPLS---GLQNTVA--SPIGAYR---------W----EFTDR---------AL 242 (368)
T ss_dssp -C-------CC--SSCHHHHHHCSTTCCCGG---GCSCCSS--CSCCEEC---------H----HHHHH---------HH
T ss_pred -c-------cc--cCCcccchhhcccccccc---ccCCCCC--CCceecC---------H----HHHHH---------HH
Confidence 0 00 00111111111 10 110 0001111 1222211 0 00000 00
Q ss_pred ccceeccccccCCCCCCCCCcccCCCeE-EEEEecC-CCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEE
Q 048197 302 EETICTMKLKHNINDPSGADAYNPRGGR-VTTVNRF-NLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGR 379 (480)
Q Consensus 302 ee~~~~~~l~~ni~~p~~~~~~~~~~G~-i~~~~~~-~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~gr 379 (480)
++ .+.+... ..++-+.+ |-. +..+|+. .-+++.+ |++....|.||.-..||=|..+ +|.||++|+|+
T Consensus 243 ~~---~~~l~~~----~~~~~~~~-g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht~s-~Vy~V~eG~G~ 311 (368)
T 3nw4_A 243 TE---QLLLEDE----GQPATVAP-GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEVGS-TVFQVFEGAGA 311 (368)
T ss_dssp HH---HHHHHHT----TCSCSSBT-TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEESSC-EEEEEEESCEE
T ss_pred Hh---hhhhhhc----cCCCcccC-ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeecccc-EEEEEEeCcEE
Confidence 00 0000000 00010100 111 2333322 1245554 7888899999999999999755 99999999999
Q ss_pred EEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 380 MQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 380 v~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+.| +| ..| ++++||+|+||.+..|...|. +++.+++|.
T Consensus 312 ~~I---~~-~~~--~w~~gD~fvvP~w~~h~~~n~-~~a~Lf~~~ 349 (368)
T 3nw4_A 312 VVM---NG-ETT--KLEKGDMFVVPSWVPWSLQAE-TQFDLFRFS 349 (368)
T ss_dssp EEE---TT-EEE--EECTTCEEEECTTCCEEEEES-SSEEEEEEE
T ss_pred EEE---CC-EEE--EecCCCEEEECCCCcEEEEeC-CCEEEEEEe
Confidence 988 23 345 699999999999999988775 578777775
No 43
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.54 E-value=5.2e-13 Score=132.07 Aligned_cols=194 Identities=13% Similarity=0.182 Sum_probs=133.2
Q ss_pred ccCeeEEEEEEcCCeeecCcc-c-CCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSY-T-NTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~-~-~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...+.+..++|.||+-..+++ + ...+++||++|+..+.+ +. +.+.|++||.+
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~-----------------------~~~~L~~GD~~ 112 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD---GQ-----------------------ETHELEAGGYA 112 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC---SS-----------------------CEEEEETTEEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE---CC-----------------------EEEEECCCCEE
Confidence 346778899999998765544 3 46789999999999876 22 24799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCccc
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLF 235 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~ 235 (480)
++|+|.+|.+.|.+++++.++.+.....+ .
T Consensus 113 ~~~~~~~H~~~N~~~~~~~~l~v~~~y~~--------------------------------------------------~ 142 (274)
T 1sef_A 113 YFTPEMKMYLANAQEADTEVFLYKKRYQP--------------------------------------------------L 142 (274)
T ss_dssp EECTTSCCEEEESSSSCEEEEEEEEECCC--------------------------------------------------C
T ss_pred EECCCCCEEEEeCCCCCEEEEEEEeeeee--------------------------------------------------C
Confidence 99999999999999999988876421110 0
Q ss_pred ccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCC
Q 048197 236 RGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNIN 315 (480)
Q Consensus 236 ~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~ 315 (480)
.| + .. .-.|++.++ +. +.. +
T Consensus 143 ~g-----------~-----------~p-~~~v~~~~d-~~---~~~----------------------------~----- 162 (274)
T 1sef_A 143 AG-----------H-----------QP-YKVVGSIHD-QQ---PEE----------------------------Y----- 162 (274)
T ss_dssp TT-----------C-----------CC-CCEEEEGGG-SC---CEE----------------------------G-----
T ss_pred CC-----------C-----------CC-cceeCChHH-CC---ccc----------------------------c-----
Confidence 01 0 00 113333221 00 000 0
Q ss_pred CCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecccccccc-ccccCCceEEEEEEeeEEEEEEecCCceEEeee
Q 048197 316 DPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAP-HWNLNAHSVVYITRGNGRMQIVAENGENVFDGQ 394 (480)
Q Consensus 316 ~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~P-Hwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~ 394 (480)
-...+..++.+..... ..++.+..+.|.||+...+ |||+ ..|++||++|++.+.+ +++ .+ .
T Consensus 163 -------~~~~g~~~~~l~~~~~----~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i---~~~-~~--~ 224 (274)
T 1sef_A 163 -------EGMTDVLLWSLLPKEF----DFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNL---DNE-WY--P 224 (274)
T ss_dssp -------GGCTTEEEEECSCSST----TCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEE---TTE-EE--E
T ss_pred -------CCCCCeEEEEeCCccc----CCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEE---CCE-EE--E
Confidence 0001222222222211 1257888999999999988 9995 5799999999999987 233 33 7
Q ss_pred cCCccEEEECCCcEEEEEc-CC-CCeEEEEEEe
Q 048197 395 IREGQLIVVPQGFAVVKRA-SN-RGLEWISFKT 425 (480)
Q Consensus 395 l~~GdV~vVPqg~~~~~~a-g~-e~l~~v~f~t 425 (480)
|++||+++||++.+|...| ++ +.++++.+++
T Consensus 225 l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~~ 257 (274)
T 1sef_A 225 VEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKD 257 (274)
T ss_dssp EETTCEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ECCCCEEEECCCCCEEEEeCCCCCCEEEEEEEc
Confidence 9999999999999998765 67 8899998864
No 44
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.53 E-value=1.3e-12 Score=126.99 Aligned_cols=185 Identities=12% Similarity=0.087 Sum_probs=128.7
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE-eC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA-LP 158 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~-iP 158 (480)
+..+..+++.||+...+|||...+++||++|++.+.+ +. +...|++||.++ ||
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~---~~-----------------------~~~~l~~Gd~i~~ip 86 (243)
T 3h7j_A 33 DTEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV---GD-----------------------VTRKMTALESAYIAP 86 (243)
T ss_dssp TEEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE---TT-----------------------EEEEEETTTCEEEEC
T ss_pred CCEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE---CC-----------------------EEEEECCCCEEEEcC
Confidence 3466677899999999999999999999999999886 22 247999999885 99
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCcccccC
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRGF 238 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~gf 238 (480)
+|++|.+.|.++++++++.+.+.....+ .+ .+. +|
T Consensus 87 ~~~~H~~~n~~~~~~~~l~i~r~~~~e~-------------~~----------------------------~p~----g~ 121 (243)
T 3h7j_A 87 PHVPHGARNDTDQEVIAIDIKRLKADET-------------YT----------------------------SPE----DY 121 (243)
T ss_dssp TTCCEEEEECSSSCEEEEEEEECCTTCC-------------CC----------------------------CCT----TS
T ss_pred CCCcEeeEeCCCCcEEEEEEeccCcccc-------------CC----------------------------Cch----hh
Confidence 9999999999999988876543221100 00 001 11
Q ss_pred CHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCCCC
Q 048197 239 DERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDPS 318 (480)
Q Consensus 239 ~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p~ 318 (480)
... . +.... -+ . ++
T Consensus 122 ----------------------------~~~-~-----L~~~~------------------~~----~------~~---- 135 (243)
T 3h7j_A 122 ----------------------------FLD-I-----FKTRD------------------LL----P------GM---- 135 (243)
T ss_dssp ----------------------------EEC-C-----EECSC------------------SB----T------TB----
T ss_pred ----------------------------hhh-h-----ccCcc------------------cc----c------Cc----
Confidence 000 0 00000 00 0 00
Q ss_pred CCCcccCCCeEEEEEecCCCCcccccceeEEeeeecc-ccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCC
Q 048197 319 GADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQ-NAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIRE 397 (480)
Q Consensus 319 ~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~p-gam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~ 397 (480)
+ +..+ ..-.+.+..+.|.| |+...+|||+. .+++||++|++.+.+= |. .+ .|++
T Consensus 136 --~--------~~~~--------~~~~~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i~---~~-~~--~l~~ 190 (243)
T 3h7j_A 136 --E--------VTFF--------VEDWVEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTVE---GC-TV--EMKF 190 (243)
T ss_dssp --C--------EEEE--------EETTEEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEET---TE-EE--EECT
T ss_pred --c--------eeee--------ccceeEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEEC---CE-EE--EECC
Confidence 0 0000 01125566778999 99999999985 6999999999998763 23 33 6999
Q ss_pred ccEEEECCCcEEEEEc-CCCCeEEEEEEec
Q 048197 398 GQLIVVPQGFAVVKRA-SNRGLEWISFKTN 426 (480)
Q Consensus 398 GdV~vVPqg~~~~~~a-g~e~l~~v~f~ts 426 (480)
||.++||.+.+|...| +++.+.++.+++.
T Consensus 191 Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p 220 (243)
T 3h7j_A 191 GTAYFCEPREDHGAINRSEKESKSINIFFP 220 (243)
T ss_dssp TCEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred CCEEEECCCCcEEeEeCCCCCEEEEEEEcC
Confidence 9999999999998765 6888999988764
No 45
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.48 E-value=5.5e-12 Score=121.33 Aligned_cols=72 Identities=17% Similarity=0.391 Sum_probs=60.0
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
++.+..+.+.||+-..+|||+ ..+++||++|++.+.+ +|+ .+ .|++||.+++|+|.+|...|+.++++++.+
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i---~g~-~~--~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYV---DGK-PF--IVKKGESAVLPANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEE---TTE-EE--EEETTEEEEECTTSCEEEECCSSCEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEE---CCE-EE--EECCCCEEEECCCCcEEEEeCCCCEEEEEE
Confidence 477888999999999999998 5799999999999886 233 33 699999999999999998774456777654
No 46
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.45 E-value=3e-12 Score=127.22 Aligned_cols=199 Identities=12% Similarity=0.156 Sum_probs=131.4
Q ss_pred ccCeeEEEEEEcCCeee-cC-cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 78 CANVAVFRHRIQQRGLV-VP-SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~-lP-h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...+.+.+++|.||+-. .| |.|...|++||++|++.+.+- | +.+.|++||.+
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~--g------------------------~~~~L~~GD~i 118 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQ--G------------------------QVHAMQPGGYA 118 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEES--S------------------------CEEEECTTEEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEEC--C------------------------EEEEECCCCEE
Confidence 34688899999999876 45 447789999999999999862 1 14799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCccc
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLF 235 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~ 235 (480)
+||+|.+|.+.|.+++++.++.+.....+ +.
T Consensus 119 ~ip~~~~H~~~N~g~~~~~~l~v~~~y~~------------~~------------------------------------- 149 (278)
T 1sq4_A 119 FIPPGADYKVRNTTGQHTRFHWIRKHYQK------------VD------------------------------------- 149 (278)
T ss_dssp EECTTCCEEEECCSSSCEEEEEEEEECCC------------CT-------------------------------------
T ss_pred EECCCCcEEEEECCCCCEEEEEEEecccc------------CC-------------------------------------
Confidence 99999999999999999998877531111 00
Q ss_pred ccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCC
Q 048197 236 RGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNIN 315 (480)
Q Consensus 236 ~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~ 315 (480)
|.+. . . -.+.... . +.|... .|.+. +-+..+
T Consensus 150 -g~~~-------------------p-~--~~vgn~~-d---i~~~~~----------------~~~~~--~~~~~r---- 180 (278)
T 1sq4_A 150 -GVPL-------------------P-E--AFVTNEQ-D---IQPLVM----------------PDTEG--RWSTTR---- 180 (278)
T ss_dssp -TCCC-------------------C-C--CEEEEGG-G---SCCEEC----------------SSGGG--CEEEEC----
T ss_pred -CCcC-------------------C-c--ccccchh-h---cCcccC----------------CCCCC--ceeEEE----
Confidence 1110 0 0 0011100 0 000000 00000 000000
Q ss_pred CCCCCCcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeec
Q 048197 316 DPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQI 395 (480)
Q Consensus 316 ~p~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l 395 (480)
.+.+.+ ...++.+..++|.||+-...|-|..-.+.+||++|++.+.+ +|+. + +|
T Consensus 181 ----------------~l~p~~----~~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~---~~~~-~--~v 234 (278)
T 1sq4_A 181 ----------------FVDMSD----MRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL---NQDW-V--EV 234 (278)
T ss_dssp ----------------SSCTTC----TTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE---TTEE-E--EE
T ss_pred ----------------EecCCC----cCCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE---CCEE-E--Ee
Confidence 011111 12358899999999999886443344588999999998775 3443 3 69
Q ss_pred CCccEEEECCCcEEEEEc-CCCCeEEEEEEec
Q 048197 396 REGQLIVVPQGFAVVKRA-SNRGLEWISFKTN 426 (480)
Q Consensus 396 ~~GdV~vVPqg~~~~~~a-g~e~l~~v~f~ts 426 (480)
++||+++++.+-+|.+.| |+++++|+.+++-
T Consensus 235 ~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d~ 266 (278)
T 1sq4_A 235 EAGDFMWLRAFCPQACYSGGPGRFRYLLYKDV 266 (278)
T ss_dssp ETTCEEEEEESCCEEEECCSSSCEEEEEEEEC
T ss_pred CCCCEEEECCCCCEEEEcCCCCCEEEEEEEEc
Confidence 999999999999999866 7899999988754
No 47
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.40 E-value=1.2e-12 Score=109.30 Aligned_cols=87 Identities=18% Similarity=0.341 Sum_probs=70.9
Q ss_pred ccee-EeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCC
Q 048197 143 HQKV-RQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQG 221 (480)
Q Consensus 143 ~qk~-~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~ 221 (480)
+||+ .+|++|||++||+|++..+.+.. .|.+||+- |+...| .++||||..
T Consensus 3 ~~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~-tna~~~------~~~~LAG~~-------------------- 53 (93)
T 1dgw_Y 3 LRRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIG-VNAENN------ERNFLAGHK-------------------- 53 (93)
T ss_dssp EEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEE-ESCTTC------CEEESSSST--------------------
T ss_pred cchhhceecCCcEEEECCCCceeEEecC--CeEEEEEE-ecCCCC------eeeeccCCc--------------------
Confidence 4454 59999999999999999999974 49999873 333223 589999941
Q ss_pred CCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEE
Q 048197 222 GEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVR 269 (480)
Q Consensus 222 ~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~ 269 (480)
+|+|+++|.++|+.||+++.+.+++|+..+++ +.|+.
T Consensus 54 ----------~Svl~~l~~evla~aF~~s~ee~~~l~~~q~e-~~~~~ 90 (93)
T 1dgw_Y 54 ----------ENVIRQIPRQVSDLTFPGSGEEVEELLENQKE-SYFVD 90 (93)
T ss_dssp ----------TBSTTTSCHHHHHHHSSSCTHHHHHHTTSCCC-CSEEC
T ss_pred ----------ccHHHhCCHHHHHHHcCCCHHHHHHHHhcCCC-ceecc
Confidence 79999999999999999999999999988764 46653
No 48
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.37 E-value=9.4e-11 Score=114.18 Aligned_cols=76 Identities=9% Similarity=0.111 Sum_probs=63.7
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
++.+..++|.||+-...|.|-...+.+||++|++.+.+ +|+ .+ +|++||.++++.+.+|...| ++++++|+.+
T Consensus 164 ~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~---~~~-~~--~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~ 237 (246)
T 1sfn_A 164 DFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL---EEN-YY--PVTAGDIIWMGAHCPQWYGALGRNWSKYLLY 237 (246)
T ss_dssp SEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE---TTE-EE--EEETTCEEEECTTCCEEEEEESSSCEEEEEE
T ss_pred CeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE---CCE-EE--EcCCCCEEEECCCCCEEEEcCCCCCEEEEEE
Confidence 58888999999998887544456799999999999887 344 34 79999999999999998755 7899999999
Q ss_pred Eec
Q 048197 424 KTN 426 (480)
Q Consensus 424 ~ts 426 (480)
++-
T Consensus 238 kd~ 240 (246)
T 1sfn_A 238 KDM 240 (246)
T ss_dssp EEC
T ss_pred Eec
Confidence 964
No 49
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.31 E-value=2e-10 Score=113.43 Aligned_cols=193 Identities=9% Similarity=0.138 Sum_probs=131.8
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
...+....++|+|||-..+|.+...+++||++|+..+.+- +. +.+.|++||.+++
T Consensus 67 G~~f~~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~--~g-----------------------~~~~L~~Gds~y~ 121 (266)
T 4e2q_A 67 GSHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNT--SS-----------------------SSKKLTVDSYAYL 121 (266)
T ss_dssp TCSSEEEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC----C-----------------------CCEEECTTEEEEE
T ss_pred CCcEEEEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEEC--CC-----------------------cEEEEcCCCEEEE
Confidence 3578889999999998766667799999999999988751 01 1479999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecCCCCcCccccccccCccccCCCCCCCCCcccccCccccc
Q 048197 158 PTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLQGYSQSQGSRYQGSQGGEGGDRSRRGGNLFRG 237 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ni~~g 237 (480)
|+|..|++.|+ +++.++.+.- + |-+ +.|
T Consensus 122 p~~~~H~~~N~--~~Ar~l~V~k-------------~-y~~------------------------------------~~g 149 (266)
T 4e2q_A 122 PPNFHHSLDCV--ESATLVVFER-------------R-YEY------------------------------------LGS 149 (266)
T ss_dssp CTTCCCEEEES--SCEEEEEEEE-------------E-CCC------------------------------------CTT
T ss_pred CCCCCEEEEeC--CCEEEEEEEe-------------E-eee------------------------------------CCC
Confidence 99999999996 4566655421 1 100 001
Q ss_pred CCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCCcccchhhHHHhhhhcCCCCCCCccceeccccccCCCCC
Q 048197 238 FDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGREQEQEQEQEFQGSGDNGIEETICTMKLKHNINDP 317 (480)
Q Consensus 238 f~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P~~~~~~e~~~~~~~~~~~~nG~ee~~~~~~l~~ni~~p 317 (480)
..- ..+|.=..+ +.|... .|
T Consensus 150 ----------------------~~p--~~~v~~~~d---v~~~~~----------------~g----------------- 169 (266)
T 4e2q_A 150 ----------------------HTT--ELIVGSTDK---QPLLET----------------PG----------------- 169 (266)
T ss_dssp ----------------------CCC--CCEEEEGGG---SCCBCC----------------TT-----------------
T ss_pred ----------------------CCC--ceeeCcHhH---CCCccc----------------CC-----------------
Confidence 000 122211101 001000 01
Q ss_pred CCCCcccCCCeEEEEEecCCCCcccccceeEEeeeecccccccc-ccccCCceEEEEEEeeEEEEEEecCCceEEeeecC
Q 048197 318 SGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAP-HWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIR 396 (480)
Q Consensus 318 ~~~~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~P-Hwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~ 396 (480)
.+-.++.+.+.++ ..++.+..++|+|||.... |-|... +.+||++|+|++.+ ++.. + +|+
T Consensus 170 --------~~~~~r~l~p~~~----~~d~~~~~~t~~PG~~~p~~e~H~~e-h~~~vL~G~g~y~l---~~~~-~--~V~ 230 (266)
T 4e2q_A 170 --------EVFELRKLLPMSV----AYDFNIHTMDFQPGEFLNVKEVHYNQ-HGLLLLEGQGIYRL---GDNW-Y--PVQ 230 (266)
T ss_dssp --------CCSEEEESSCCST----TCSEEEEEEEECTTCBCSSCCCCSCC-EEEEEEECEEEEEE---TTEE-E--EEE
T ss_pred --------CcEEEEEccCccc----ccceEEEEEEECCCcCcCCceEcccc-eEEEEEeceEEEEE---CCEE-E--Eec
Confidence 1223344444442 3468999999999999986 777544 88999999998774 3333 3 699
Q ss_pred CccEEEECCCcEEEEEc-CCCCeEEEEEEec
Q 048197 397 EGQLIVVPQGFAVVKRA-SNRGLEWISFKTN 426 (480)
Q Consensus 397 ~GdV~vVPqg~~~~~~a-g~e~l~~v~f~ts 426 (480)
+||++++|.+.+|+..| |+++|+||-.++-
T Consensus 231 ~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd~ 261 (266)
T 4e2q_A 231 AGDVIWMAPFVPQWYAALGKTRSRYLLYKDV 261 (266)
T ss_dssp TTCEEEECTTCCEEEEEESSSCEEEEEEEEC
T ss_pred CCCEEEECCCCcEEEEeCCCCCEEEEEEccc
Confidence 99999999999999866 6899999998864
No 50
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.24 E-value=1.5e-11 Score=99.97 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=63.3
Q ss_pred ccCCCCCCcceecCCceEEEeCCCC-hhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEEcCCC
Q 048197 49 DLNALEPQQRVESEAGVTEFWDQND-EQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAVFPGC 121 (480)
Q Consensus 49 ~L~a~eP~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg~ 121 (480)
+|...+| .+.+..|.+...+..+ |.|+.+|++++|+.|.|||+..|||| +|.|++||++|++++++|+|.+
T Consensus 5 nl~~~~p--~~~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 5 NLRSRDP--IYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp ETTSSCC--SEECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred ccccCCC--CccCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 5667777 5789999988888755 99999999999999999999999998 6999999999999999998754
No 51
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.11 E-value=5.5e-10 Score=102.67 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=74.9
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
..++.+..+++.||+...+|||...+++||++|++.+.+ +. +...|++||+++|
T Consensus 53 ~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i---~~-----------------------~~~~l~~Gd~i~i 106 (167)
T 3ibm_A 53 APAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL---DD-----------------------RVEPLTPLDCVYI 106 (167)
T ss_dssp SSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE---TT-----------------------EEEEECTTCEEEE
T ss_pred CCcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE---CC-----------------------EEEEECCCCEEEE
Confidence 457888899999999999999999999999999999876 11 2579999999999
Q ss_pred CCCCEEEEEcCC-CCcEEEEEEeeCCCCCcccc
Q 048197 158 PTGSANWIYNDG-PSELVVVALVDVGNSDNQLD 189 (480)
Q Consensus 158 PaG~~h~~~N~G-~~~l~~v~~~d~~n~~nqld 189 (480)
|+|.+|++.|.+ ++++.++++++......|++
T Consensus 107 p~~~~H~~~n~~~~~~~~~l~i~~~~~d~p~~p 139 (167)
T 3ibm_A 107 APHAWHQIHATGANEPLGFLCIVDSDRDRPQRP 139 (167)
T ss_dssp CTTCCEEEEEESSSCCEEEEEEEESSCCCCBCC
T ss_pred CCCCcEEEEeCCCCCCEEEEEEEeCCcCcccCC
Confidence 999999999999 99999999988776655554
No 52
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.11 E-value=7.3e-10 Score=100.57 Aligned_cols=115 Identities=13% Similarity=0.160 Sum_probs=83.5
Q ss_pred cccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhh
Q 048197 48 QDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQE 127 (480)
Q Consensus 48 ~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~ 127 (480)
.+++..++... ..++.....+... +.....++.+.++++.||+...+|||+..+++||++|++.+.+- ++.++|.
T Consensus 10 ~~~~~~~~~~~-~~~G~~~~~l~~~-~~~g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~--~~~~~~~- 84 (163)
T 1lr5_A 10 RDISQMPQSSY-GIEGLSHITVAGA-LNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMG--SSSLKYP- 84 (163)
T ss_dssp EEGGGSCCBCT-TCTTEEEEEEECH-HHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEEC--CSSSSSC-
T ss_pred cChHHCChhhc-cCCCcceEEEecc-ccCCCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEEC--Ccccccc-
Confidence 35666666543 3444444444221 11223468888999999999899999999999999999999874 3222221
Q ss_pred hhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCC-CCcEEEEEEeeC
Q 048197 128 SQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDG-PSELVVVALVDV 181 (480)
Q Consensus 128 ~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G-~~~l~~v~~~d~ 181 (480)
...+...|++||+++||+|++|++.|.+ ++++.+++++..
T Consensus 85 --------------~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 125 (163)
T 1lr5_A 85 --------------GQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISR 125 (163)
T ss_dssp --------------CSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEES
T ss_pred --------------CccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECC
Confidence 0013579999999999999999999999 899999988754
No 53
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.04 E-value=1.1e-09 Score=94.52 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=67.5
Q ss_pred ccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
+.++.+.++++.||+...+|||. ..+++||++|++.+.+ .+. +...|++||+++
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~~-----------------------~~~~l~~Gd~~~ 90 (125)
T 3h8u_A 36 TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ--GNG-----------------------IVTHLKAGDIAI 90 (125)
T ss_dssp CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC--STT-----------------------CEEEEETTEEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE--CCC-----------------------eEEEeCCCCEEE
Confidence 44678889999999999999998 5899999999998854 121 247999999999
Q ss_pred eCCCCEEEEEcCCCCcEEEEEEeeCC
Q 048197 157 LPTGSANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
+|+|.+|++.|.+++++++++++...
T Consensus 91 i~~~~~H~~~n~~~~~~~~l~v~~p~ 116 (125)
T 3h8u_A 91 AKPGQVHGAMNSGPEPFIFVSVVAPG 116 (125)
T ss_dssp ECTTCCCEEEECSSSCEEEEEEEEST
T ss_pred ECCCCEEEeEeCCCCCEEEEEEECCC
Confidence 99999999999999999999887543
No 54
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.01 E-value=3.6e-09 Score=96.32 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=77.4
Q ss_pred ceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhccccccccccccc
Q 048197 64 GVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQH 143 (480)
Q Consensus 64 G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~ 143 (480)
|.+..|--..+. .++.+..+++.||+...+|||+..+++||++|++.+.+ +.
T Consensus 30 g~~~~~L~~~~~---~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v---~g---------------------- 81 (156)
T 3kgz_A 30 DVSRQLLFADPN---LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV---GE---------------------- 81 (156)
T ss_dssp EEEEEEEECCTT---CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE---TT----------------------
T ss_pred CeEEEEEEcCCC---CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE---CC----------------------
Confidence 556555322222 57888899999999999999999999999999999875 21
Q ss_pred ceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCcc
Q 048197 144 QKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQ 187 (480)
Q Consensus 144 qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nq 187 (480)
+...|++||+++||+|..|.+.|.+++++.+++++......-|
T Consensus 82 -~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d~p~ 124 (156)
T 3kgz_A 82 -TISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARDRPQ 124 (156)
T ss_dssp -EEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSCCCCB
T ss_pred -EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCCccc
Confidence 2579999999999999999999999999999999876654433
No 55
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.99 E-value=2.9e-09 Score=96.33 Aligned_cols=79 Identities=23% Similarity=0.283 Sum_probs=68.8
Q ss_pred ccCeeEEEEEEcCCe-eecCccc-CCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 78 CANVAVFRHRIQQRG-LVVPSYT-NTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 78 ~~gvs~~r~~i~p~g-l~lPh~~-~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
..++.+..+++.||+ ...+||| ...|++||++|++.+.+ +. +...|++||++
T Consensus 43 ~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~-----------------------~~~~l~~Gd~i 96 (162)
T 3l2h_A 43 LRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---EN-----------------------DQYPIAPGDFV 96 (162)
T ss_dssp CCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TT-----------------------EEEEECTTCEE
T ss_pred CCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CC-----------------------EEEEeCCCCEE
Confidence 457889999999999 5889999 79999999999999975 11 25799999999
Q ss_pred EeCCC-CEEEEEcCCCCcEEEEEEeeCC
Q 048197 156 ALPTG-SANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 156 ~iPaG-~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
+||+| .+|++.|.++++++++++....
T Consensus 97 ~i~~~~~~H~~~n~~~~~~~~l~v~~p~ 124 (162)
T 3l2h_A 97 GFPCHAAAHSISNDGTETLVCLVIGQRL 124 (162)
T ss_dssp EECTTSCCEEEECCSSSCEEEEEEEECC
T ss_pred EECCCCceEEeEeCCCCCEEEEEEECCC
Confidence 99998 9999999999999999886543
No 56
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.95 E-value=6e-09 Score=91.55 Aligned_cols=81 Identities=11% Similarity=0.197 Sum_probs=70.2
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
..+.+..+++.||+...+|||...+++||++|++.+.+...+ +...+++||+++||
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~------------------------~~~~l~~Gd~~~ip 92 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQG------------------------RTEEVGPGEAIFIP 92 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGT------------------------EEEEECTTCEEEEC
T ss_pred CcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECC------------------------EEEEECCCCEEEEC
Confidence 478888999999999999999999999999999998742222 25799999999999
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
+|.+|++.|.+++++.+++++....
T Consensus 93 ~~~~H~~~~~~~~~~~~l~i~~~~~ 117 (145)
T 3ht1_A 93 RGEPHGFVTGPGQTCRFLVVAPCER 117 (145)
T ss_dssp TTCCBEEECCTTCCEEEEEEEESCC
T ss_pred CCCeEEeEcCCCCCEEEEEEECCCC
Confidence 9999999999999999998876554
No 57
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.95 E-value=6e-09 Score=85.59 Aligned_cols=78 Identities=12% Similarity=0.173 Sum_probs=67.1
Q ss_pred cccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 77 QCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 77 ~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...++.+..+++.||+-..+|+|+ ..+++||++|++.+.+ +. +...+++||++
T Consensus 24 ~~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~-----------------------~~~~l~~Gd~~ 77 (105)
T 1v70_A 24 QSERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GE-----------------------EEALLAPGMAA 77 (105)
T ss_dssp EETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TT-----------------------EEEEECTTCEE
T ss_pred CCCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CC-----------------------EEEEeCCCCEE
Confidence 345788899999999988899987 4789999999999876 11 24799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
++|+|..|++.|.+++++.++.+..
T Consensus 78 ~ip~~~~H~~~~~~~~~~~~~~v~~ 102 (105)
T 1v70_A 78 FAPAGAPHGVRNESASPALLLVVTA 102 (105)
T ss_dssp EECTTSCEEEECCSSSCEEEEEEEE
T ss_pred EECCCCcEEeEeCCCCCEEEEEEeC
Confidence 9999999999999999999888764
No 58
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.95 E-value=5.8e-09 Score=95.96 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=70.2
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.++.+..+++.||+...+|||...+++||++|++.+.+ +. +...|++||+++||
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v---~g-----------------------~~~~l~~GD~i~ip 104 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMV---GR-----------------------AVSAVAPYDLVTIP 104 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEE---TT-----------------------EEEEECTTCEEEEC
T ss_pred CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE---CC-----------------------EEEEeCCCCEEEEC
Confidence 57888899999999999999999999999999999865 21 25799999999999
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
+|+.|++.|.++++++++++.....
T Consensus 105 ~g~~H~~~n~~~~~~~~l~i~~~~~ 129 (166)
T 3jzv_A 105 GWSWHQFRAPADEALGFLCMVNAER 129 (166)
T ss_dssp TTCCEEEECCTTSCEEEEEEEESSC
T ss_pred CCCcEEeEeCCCCCEEEEEEEccCC
Confidence 9999999999999999999886543
No 59
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.92 E-value=7.2e-09 Score=88.34 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=65.5
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeE-eecCCcEEEe
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVR-QIREGDLVAL 157 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~-~l~~GDV~~i 157 (480)
.++.+.++++.||+...+|||+..+++||++|++.+.+ .+ + .. .|++||+++|
T Consensus 25 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i--~~--~----------------------~~~~l~~Gd~i~i 78 (117)
T 2b8m_A 25 EHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL--ED--Q----------------------EPHNYKEGNIVYV 78 (117)
T ss_dssp SSCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEE--TT--S----------------------CCEEEETTCEEEE
T ss_pred CceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEE--CC--E----------------------EEEEeCCCCEEEE
Confidence 36778889999999988999999999999999999876 22 1 35 8999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEe
Q 048197 158 PTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~ 179 (480)
|+|.+|++.|.+++++.++++.
T Consensus 79 p~~~~H~~~~~~~~~~~~l~i~ 100 (117)
T 2b8m_A 79 PFNVKMLIQNINSDILEFFVVK 100 (117)
T ss_dssp CTTCEEEEECCSSSEEEEEEEE
T ss_pred CCCCcEEeEcCCCCCEEEEEEE
Confidence 9999999999999998888773
No 60
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.92 E-value=8.5e-09 Score=86.28 Aligned_cols=79 Identities=20% Similarity=0.240 Sum_probs=68.1
Q ss_pred cccCeeEEEEEEcCCeeecCc--ccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCc
Q 048197 77 QCANVAVFRHRIQQRGLVVPS--YTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGD 153 (480)
Q Consensus 77 ~~~gvs~~r~~i~p~gl~lPh--~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GD 153 (480)
...++.+.++++.||+...+| +|+ ..+++||++|++.+.+ +. +...|++||
T Consensus 17 ~~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~-----------------------~~~~l~~Gd 70 (113)
T 2gu9_A 17 SLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DG-----------------------HTQALQAGS 70 (113)
T ss_dssp EETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TT-----------------------EEEEECTTE
T ss_pred cCCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CC-----------------------EEEEeCCCC
Confidence 345788899999999988878 887 8999999999999876 11 247999999
Q ss_pred EEEeCCCCEEEEEcCCCCcEEEEEEeeC
Q 048197 154 LVALPTGSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 154 V~~iPaG~~h~~~N~G~~~l~~v~~~d~ 181 (480)
+++||+|.+|++.|.+++++.++.++..
T Consensus 71 ~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 71 LIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred EEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 9999999999999999999998888654
No 61
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.90 E-value=5.4e-09 Score=90.05 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=66.6
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
++.+.++.|.||+-..+|||+...|+.||++|++.+.+- +|.. + .|++||+++||.|.+|...+ +++++.++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~~-~--~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQG--NGIV-T--HLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECS--TTCE-E--EEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEEC--CCeE-E--EeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 478888999999999999999889999999999998652 2333 3 69999999999999998765 6889999998
Q ss_pred EecCCCc
Q 048197 424 KTNDVAK 430 (480)
Q Consensus 424 ~ts~~~~ 430 (480)
.+...+.
T Consensus 113 ~~p~~~~ 119 (125)
T 3h8u_A 113 VAPGNAG 119 (125)
T ss_dssp EESTTCC
T ss_pred ECCCccc
Confidence 7654433
No 62
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=7.4e-09 Score=88.81 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=67.4
Q ss_pred ccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 76 LQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 76 l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+...++.+.++++.||+-..+|||+..+++||++|++.+.+ +. +...|++||++
T Consensus 31 ~~~~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~~-----------------------~~~~l~~Gd~i 84 (114)
T 3fjs_A 31 FKEHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV---DG-----------------------AQRRLHQGDLL 84 (114)
T ss_dssp EEETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEE---TT-----------------------EEEEECTTEEE
T ss_pred EeCCCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEE---CC-----------------------EEEEECCCCEE
Confidence 44568899999999999999999999999999999999876 21 24799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEe
Q 048197 156 ALPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
+||+|++|++.|.++..+.++.++
T Consensus 85 ~ip~~~~H~~~~~~~~~~~~~~v~ 108 (114)
T 3fjs_A 85 YLGAGAAHDVNAITNTSLLVTVVL 108 (114)
T ss_dssp EECTTCCEEEEESSSEEEEEEEEC
T ss_pred EECCCCcEEEEeCCCcEEEEEEEe
Confidence 999999999999988777776554
No 63
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.88 E-value=1.2e-08 Score=91.30 Aligned_cols=83 Identities=16% Similarity=0.189 Sum_probs=68.2
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
++.+..+.+.||+...+|||+...|++||++|++.+.+-+..+...+...|++||+++||+|.+|...+ +++++.++.+
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 477888999999999999999889999999999999986543222223479999999999999998755 6788998887
Q ss_pred EecC
Q 048197 424 KTND 427 (480)
Q Consensus 424 ~ts~ 427 (480)
....
T Consensus 122 ~~~~ 125 (148)
T 2oa2_A 122 YAPP 125 (148)
T ss_dssp EESC
T ss_pred ECCC
Confidence 6543
No 64
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.87 E-value=1.5e-08 Score=90.50 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=66.7
Q ss_pred cCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
.++.+.++++.||+...+|||. ..+++||++|++.+.+- +.... ..-...|++||+++|
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~--~~~~~------------------~~~~~~l~~Gd~i~i 100 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMG--HRQDN------------------LHFQEEVFDDYAILI 100 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEE--SBTTB------------------CCEEEEEETTCEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEEC--Ccccc------------------ceeeEEECCCCEEEE
Confidence 3577888999999988999997 56999999999999873 11100 000269999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeC
Q 048197 158 PTGSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~ 181 (480)
|+|++|++.|.+++++.+++++..
T Consensus 101 p~g~~H~~~n~~~~~~~~l~i~~~ 124 (148)
T 2oa2_A 101 PAGTWHNVRNTGNRPLKLYSIYAP 124 (148)
T ss_dssp CTTCEEEEEECSSSCEEEEEEEES
T ss_pred CCCCcEEEEECCCCCEEEEEEECC
Confidence 999999999999999988887644
No 65
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.87 E-value=2e-08 Score=94.08 Aligned_cols=84 Identities=14% Similarity=0.204 Sum_probs=69.0
Q ss_pred cCeeEEEEEEcCCee------ecCcccC---CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEee
Q 048197 79 ANVAVFRHRIQQRGL------VVPSYTN---TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQI 149 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl------~lPh~~~---a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l 149 (480)
.++.+..++|.||+. ..+|||. ..|++||++|++.+.+-.... + .+...|
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g-~--------------------~~~~~l 123 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEG-D--------------------AKWISM 123 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTC-C--------------------EEEEEE
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCC-c--------------------EEEEEE
Confidence 367778889999998 7789985 479999999999998853211 1 124799
Q ss_pred cCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 150 REGDLVALPTGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 150 ~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
++||+++||+|.+|++.|.|++++++++++....
T Consensus 124 ~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (190)
T 1x82_A 124 EPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPADA 157 (190)
T ss_dssp CTTCEEEECTTCEEEEEECSSSCEEEEEEEETTC
T ss_pred CCCcEEEECCCCeEEEEECCcccEEEEEEECCCc
Confidence 9999999999999999999999999998876543
No 66
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.86 E-value=3.1e-09 Score=88.20 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=64.9
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCC-eEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTP-ELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~-el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
...+.+.+++++||+-..+|.|... +++||++|++.+.+ .++. +...|++||+++
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~g~----------------------~~~~l~~Gd~~~ 70 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET--PEGS----------------------VTSQLTRGVSYT 70 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE--TTEE----------------------EEEEECTTCCEE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe--CCCC----------------------EEEEEcCCCEEE
Confidence 3478889999999998878888876 59999999999875 2210 147999999999
Q ss_pred eCCCCEEEEEcCCCCcEEEEEE
Q 048197 157 LPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
+|+|.+|++.|.|+++++++.+
T Consensus 71 ~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 71 RPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp ECTTCEEEEECCSSSCEEEEEE
T ss_pred eCCCCcccCEeCCCCcEEEEEE
Confidence 9999999999999999988876
No 67
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.86 E-value=2.2e-08 Score=87.93 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=65.6
Q ss_pred ccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
...+.+.++++.||+-..+|+|. ..+++||++|++.+.+- + +...|++||+++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~--~------------------------~~~~l~~Gd~i~ 107 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN--G------------------------KDVPIKAGDVCF 107 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET--T------------------------EEEEEETTEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC--C------------------------EEEEeCCCcEEE
Confidence 44567789999999988899996 69999999999998761 1 257999999999
Q ss_pred eCCCCEEEEEcCCCCcEEEEEEe
Q 048197 157 LPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
+|+|.+|++.|.++++++++++.
T Consensus 108 i~~~~~H~~~n~~~~~~~~l~v~ 130 (133)
T 1o4t_A 108 TDSGESHSIENTGNTDLEFLAVI 130 (133)
T ss_dssp ECTTCEEEEECCSSSCEEEEEEE
T ss_pred ECCCCcEEeEECCCCCEEEEEEE
Confidence 99999999999999999888764
No 68
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.85 E-value=1.6e-08 Score=91.41 Aligned_cols=79 Identities=13% Similarity=0.171 Sum_probs=67.5
Q ss_pred ceeEEeeeecccc-ccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCC-cEEEEEc-CCCCeEEE
Q 048197 345 QLSAEKGNLYQNA-MMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQG-FAVVKRA-SNRGLEWI 421 (480)
Q Consensus 345 ~lsa~~v~L~pga-m~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg-~~~~~~a-g~e~l~~v 421 (480)
++.+..+.|.||+ ...+|||+...|+.||++|++.+.+- |+ .+ .|++||+++||+| .+|...| +++++.++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~-~~--~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l 118 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME---ND-QY--PIAPGDFVGFPCHAAAHSISNDGTETLVCL 118 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET---TE-EE--EECTTCEEEECTTSCCEEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC---CE-EE--EeCCCCEEEECCCCceEEeEeCCCCCEEEE
Confidence 5899999999999 58999999999999999999998852 33 34 6999999999998 9998765 67899999
Q ss_pred EEEecCCC
Q 048197 422 SFKTNDVA 429 (480)
Q Consensus 422 ~f~ts~~~ 429 (480)
.+.+....
T Consensus 119 ~v~~p~~~ 126 (162)
T 3l2h_A 119 VIGQRLDQ 126 (162)
T ss_dssp EEEECCSE
T ss_pred EEECCCCC
Confidence 98876543
No 69
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.85 E-value=3.4e-08 Score=85.02 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=66.5
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
..++.+.++++.||+...+|+|...+++||++|++.+.+ +. +...+++||+++|
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~-----------------------~~~~l~~Gd~~~i 91 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI---GE-----------------------ETRVLRPGMAYTI 91 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE---TT-----------------------EEEEECTTEEEEE
T ss_pred CCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE---CC-----------------------EEEEeCCCCEEEE
Confidence 347889999999999999999999999999999999876 21 2479999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeC
Q 048197 158 PTGSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~ 181 (480)
|+|+.|.+.|.++ ++.++.++..
T Consensus 92 p~~~~H~~~~~~~-~~~~l~v~~p 114 (126)
T 4e2g_A 92 PGGVRHRARTFED-GCLVLDIFSP 114 (126)
T ss_dssp CTTCCEEEECCTT-CEEEEEEEES
T ss_pred CCCCcEEeEECCC-CEEEEEEECC
Confidence 9999999999988 7777777654
No 70
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.84 E-value=2e-08 Score=86.64 Aligned_cols=75 Identities=19% Similarity=0.245 Sum_probs=66.2
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
..+.+...++.||....+|||+..|++||++|++.+.+ +. +...+++||+++||
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i---~~-----------------------~~~~l~~Gd~~~i~ 85 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRI---ND-----------------------EDFPVTKGDLIIIP 85 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEE---TT-----------------------EEEEEETTCEEEEC
T ss_pred CCcEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEE---CC-----------------------EEEEECCCcEEEEC
Confidence 35788889999999999999999999999999999986 21 25799999999999
Q ss_pred CCCEEEEEcCCCCcEEEEEEe
Q 048197 159 TGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~ 179 (480)
+|.+|++.|.+++++.++++.
T Consensus 86 ~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 86 LDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp TTCCEEEEECSSSCEEEEEEE
T ss_pred CCCcEEeEeCCCCCEEEEEEE
Confidence 999999999999988887764
No 71
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.84 E-value=1.9e-08 Score=82.59 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=65.6
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
-++.+..+.+.||+...+|||+...|+.||++|++.+.+ +++ .+ .|++||+++||+|.+|...+ +++++.++.
T Consensus 26 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~-~~--~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 26 ERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE-EA--LLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE-EE--EECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred CceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE-EE--EeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 358889999999999999999988999999999999876 233 33 69999999999999998866 577899888
Q ss_pred EEec
Q 048197 423 FKTN 426 (480)
Q Consensus 423 f~ts 426 (480)
+.+.
T Consensus 100 v~~p 103 (105)
T 1v70_A 100 VTAP 103 (105)
T ss_dssp EEES
T ss_pred EeCC
Confidence 7653
No 72
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.83 E-value=1.5e-08 Score=88.02 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=66.9
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
..++.+.++++.|++...+|+|+..+++||++|++.+.+ .+ +...+++||++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i--~~------------------------~~~~l~~Gd~i~i 98 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK--EQ------------------------GEETVEEGFYIFV 98 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC--SS------------------------CEEEEETTEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE--CC------------------------EEEEECCCCEEEE
Confidence 447889999999999888999999999999999999875 11 1479999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEe
Q 048197 158 PTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~ 179 (480)
|+|.+|++.|.+++++.+++++
T Consensus 99 p~g~~H~~~~~~~~~~~~l~v~ 120 (126)
T 1vj2_A 99 EPNEIHGFRNDTDSEVEFLCLI 120 (126)
T ss_dssp CTTCCEEEECCSSSCEEEEEEE
T ss_pred CCCCcEEeEeCCCCCEEEEEEE
Confidence 9999999999999999888775
No 73
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.81 E-value=8.9e-09 Score=93.33 Aligned_cols=80 Identities=8% Similarity=0.091 Sum_probs=66.6
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCC----c-eEEeeecCCccEEEECCCcEEEEEc-C-CCC
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENG----E-NVFDGQIREGQLIVVPQGFAVVKRA-S-NRG 417 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G----~-~~f~~~l~~GdV~vVPqg~~~~~~a-g-~e~ 417 (480)
++.+..+.+.||+...+|||+ ..|++||++|++.+.+-+..+ . ..+ .|++||+++||+|.+|...+ + +++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~--~l~~Gd~i~ip~~~~H~~~n~~~~~~ 116 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEI--PFFQNTTFSIPVNDPHQVWNSDEHED 116 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEE--EECTTEEEEECTTCCEEEECCCSSSC
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEE--EeCCCCEEEECCCCcEEeEeCCCCCC
Confidence 588889999999999999995 679999999999999876321 1 334 69999999999999998865 6 678
Q ss_pred eEEEEEEecC
Q 048197 418 LEWISFKTND 427 (480)
Q Consensus 418 l~~v~f~ts~ 427 (480)
++++.+....
T Consensus 117 ~~~l~i~~~~ 126 (163)
T 1lr5_A 117 LQVLVIISRP 126 (163)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEECCC
Confidence 9999887554
No 74
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.81 E-value=3.7e-08 Score=91.61 Aligned_cols=80 Identities=11% Similarity=0.040 Sum_probs=66.2
Q ss_pred ccCeeEEEEEEcCCeeec---CcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcE
Q 048197 78 CANVAVFRHRIQQRGLVV---PSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDL 154 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~l---Ph~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV 154 (480)
...+.+.++++.||+... +|||+..|++||++|++.+.+-..+.. +.+.|++||.
T Consensus 114 ~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~----------------------~~~~l~~GD~ 171 (198)
T 2bnm_A 114 APSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENP----------------------KEALLPTGAS 171 (198)
T ss_dssp STTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSC----------------------EEEEECTTCE
T ss_pred CCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCc----------------------ccEEECCCCE
Confidence 457888999999999776 577888999999999999887221111 2579999999
Q ss_pred EEeCCCCEEEEEcC-CCCcEEEEEEe
Q 048197 155 VALPTGSANWIYND-GPSELVVVALV 179 (480)
Q Consensus 155 ~~iPaG~~h~~~N~-G~~~l~~v~~~ 179 (480)
++||+|++|++.|. +++++++++++
T Consensus 172 ~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 172 MFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp EEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred EEeCCCCceEEEecCCCCCeEEEEEe
Confidence 99999999999999 99999888764
No 75
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.80 E-value=3.2e-08 Score=90.36 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=76.9
Q ss_pred ceecCCceEEEeCCCChhccccCeeEEEEEEcCCeee-cCcccCC-CeEEEEEeceEEEEEEcCCCccchhhhhhccccc
Q 048197 58 RVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLV-VPSYTNT-PELFYVVQGRGIHGAVFPGCPETYQESQQRSSES 135 (480)
Q Consensus 58 ~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~-lPh~~~a-~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~ 135 (480)
....+.|.+...-. +......+.+..++|.||+-. .+|||.. .|++||++|++.+.+ +.
T Consensus 22 ~~~~~~G~~~~~l~--~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---~~-------------- 82 (163)
T 3i7d_A 22 LNAAMDGRSSLRLG--DAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---DQ-------------- 82 (163)
T ss_dssp GGGGGTTEEEEEHH--HHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE---TT--------------
T ss_pred ccccCCCeEEEEcc--cCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE---CC--------------
Confidence 34455676654322 233445788999999999955 6899976 799999999999886 11
Q ss_pred ccccccccceeEeecCCcEEEeCCC--CEEEEEcCCCCcEEEEEEeeCCC
Q 048197 136 QSRSQDQHQKVRQIREGDLVALPTG--SANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 136 ~~~~~d~~qk~~~l~~GDV~~iPaG--~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
+...|++||+++||+| +.|++.|.++++++++++.....
T Consensus 83 ---------~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~ 123 (163)
T 3i7d_A 83 ---------GEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRTP 123 (163)
T ss_dssp ---------EEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECCS
T ss_pred ---------EEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCCC
Confidence 2579999999999999 99999999999999998875543
No 76
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.80 E-value=3e-08 Score=88.81 Aligned_cols=77 Identities=21% Similarity=0.351 Sum_probs=67.6
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhccccccccccccccee-EeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKV-RQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~-~~l~~GDV~~ 156 (480)
..++.+.++++.||+...+|+|+..+++||++|++.+.+ .+ +. ..+++||+++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~--~~------------------------~~~~~l~~Gd~i~ 98 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE--RG------------------------KPARILKKGDVVE 98 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEE--TT------------------------SCCEEEETTCEEE
T ss_pred CCcEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEE--CC------------------------EEEEEECCCCEEE
Confidence 347889999999999989999999999999999999875 11 13 6899999999
Q ss_pred eCCCCEEEEEcCCCCcEEEEEEee
Q 048197 157 LPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
||+|.+|++.|.+++++.++++..
T Consensus 99 ip~~~~H~~~n~~~~~~~~l~v~~ 122 (147)
T 2f4p_A 99 IPPNVVHWHGAAPDEELVHIGIST 122 (147)
T ss_dssp ECTTCCEEEEEBTTBCEEEEEEEC
T ss_pred ECCCCcEEeEeCCCCCEEEEEEEc
Confidence 999999999999999999888753
No 77
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.79 E-value=9.8e-09 Score=86.18 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=64.1
Q ss_pred cccCeeEEEEEEcCCeeecCcccCCC-eEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 77 QCANVAVFRHRIQQRGLVVPSYTNTP-ELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 77 ~~~gvs~~r~~i~p~gl~lPh~~~a~-el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
....+.+.|++++||+-...|+|..+ +++||+.|++++.. +++.. ++..+++||++
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~---------------------~~~~l~~G~~~ 69 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTR---------------------SLAQLKTGRSY 69 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCE---------------------ECCCBCTTCCE
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCce---------------------EEEEecCCcEE
Confidence 34468899999999999999999755 66778899988753 33221 24689999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEE
Q 048197 156 ALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
++|+|..|.+.|.|++||++|-+
T Consensus 70 ~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 70 ARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp EECTTCEEEEBCCSSSCEEEEEE
T ss_pred EEcCCCcEECEECCCCeEEEEEE
Confidence 99999999999999999999976
No 78
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.77 E-value=1.6e-08 Score=85.01 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=60.3
Q ss_pred ccccCeeEEEEEEcCCeeecCcccCCC-eEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcE
Q 048197 76 LQCANVAVFRHRIQQRGLVVPSYTNTP-ELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDL 154 (480)
Q Consensus 76 l~~~gvs~~r~~i~p~gl~lPh~~~a~-el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV 154 (480)
+....+.+.+++|.||+-.--|.|..+ .++|+++|++++. ..++.. +...+++||+
T Consensus 12 ~~~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~--~~dG~~---------------------~~~~l~aGd~ 68 (98)
T 2ozi_A 12 IDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIV--APDGTR---------------------SLAQLKTGRS 68 (98)
T ss_dssp EESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEE--CTTSCE---------------------ECCCBCTTCC
T ss_pred EeCCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEE--eCCCcE---------------------EEEEECCCCE
Confidence 345578999999999998866667654 3444556665554 444320 1358999999
Q ss_pred EEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 155 VALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 155 ~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
+++|+|..||+.|.|++++++|++
T Consensus 69 ~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 69 YARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp EEECTTCEEEEEECSSSCEEEEEE
T ss_pred EEECCCCceeCEECCCCCEEEEEE
Confidence 999999999999999999999987
No 79
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.77 E-value=6e-08 Score=95.62 Aligned_cols=77 Identities=13% Similarity=0.145 Sum_probs=67.7
Q ss_pred cCeeEEEEEEcCCeeecC-cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 79 ANVAVFRHRIQQRGLVVP-SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lP-h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
..+.+..++++||+.... |||...|++||++|++.+.+ +. +...|++||+++|
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i---~~-----------------------~~~~l~~GD~i~i 233 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL---DN-----------------------EWYPVEKGDYIFM 233 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE---TT-----------------------EEEEEETTCEEEE
T ss_pred CCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE---CC-----------------------EEEEECCCCEEEE
Confidence 367888999999998777 89999999999999999986 21 2579999999999
Q ss_pred CCCCEEEEEcCCC-CcEEEEEEeeC
Q 048197 158 PTGSANWIYNDGP-SELVVVALVDV 181 (480)
Q Consensus 158 PaG~~h~~~N~G~-~~l~~v~~~d~ 181 (480)
|+|.+|+++|.++ +++.++++.|.
T Consensus 234 ~~~~~H~~~n~~~~~~~~~l~~~~~ 258 (274)
T 1sef_A 234 SAYVPQAAYAVGREEPLMYVYSKDA 258 (274)
T ss_dssp CTTCCEEEEEECSSSCEEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCCEEEEEEEcC
Confidence 9999999999999 99999887765
No 80
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.77 E-value=4.3e-08 Score=91.80 Aligned_cols=82 Identities=17% Similarity=0.282 Sum_probs=69.6
Q ss_pred ceeEEeeeeccccc------ccccccc--CCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CC
Q 048197 345 QLSAEKGNLYQNAM------MAPHWNL--NAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SN 415 (480)
Q Consensus 345 ~lsa~~v~L~pgam------~~PHwh~--nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~ 415 (480)
++.+..+.|.||+. ..+|||+ +..|+.||++|++.+.+-+..|+ .+...|++||+++||+|.+|...| ++
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~-~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGD-AKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCC-EEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCc-EEEEEECCCcEEEECCCCeEEEEECCc
Confidence 57788889999998 7799998 56899999999999999887665 334589999999999999998755 68
Q ss_pred CCeEEEEEEecC
Q 048197 416 RGLEWISFKTND 427 (480)
Q Consensus 416 e~l~~v~f~ts~ 427 (480)
++++++++...+
T Consensus 145 ~~~~~l~v~~~~ 156 (190)
T 1x82_A 145 EPFIFLAIYPAD 156 (190)
T ss_dssp SCEEEEEEEETT
T ss_pred ccEEEEEEECCC
Confidence 899999887554
No 81
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.77 E-value=3.9e-08 Score=84.87 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=67.6
Q ss_pred hhccccCeeEEEEEEcCCeeec-CcccCCCeEEE-EEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecC
Q 048197 74 EQLQCANVAVFRHRIQQRGLVV-PSYTNTPELFY-VVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIRE 151 (480)
Q Consensus 74 ~~l~~~gvs~~r~~i~p~gl~l-Ph~~~a~el~y-V~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~ 151 (480)
+.+.+.++.+..+++.|++... ||||+..+++| |++|++.+.+- + +...|++
T Consensus 19 ~~~~~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~--~------------------------~~~~l~~ 72 (125)
T 3cew_A 19 DSLALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID--G------------------------EKIELQA 72 (125)
T ss_dssp HHHTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET--T------------------------EEEEEET
T ss_pred cccCCCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC--C------------------------EEEEeCC
Confidence 3455678889999999999877 79998776555 99999998761 1 2579999
Q ss_pred CcEEEeCCCCEEEEEcCCCCcEEEEEEeeC
Q 048197 152 GDLVALPTGSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 152 GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~ 181 (480)
||+++||+|.+|++.|.+++++.++++...
T Consensus 73 Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 73 GDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp TEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred CCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 999999999999999999999888877543
No 82
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.75 E-value=5.9e-08 Score=81.06 Aligned_cols=78 Identities=18% Similarity=0.260 Sum_probs=65.9
Q ss_pred cceeEEeeeeccccccccc--cccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEE
Q 048197 344 IQLSAEKGNLYQNAMMAPH--WNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEW 420 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PH--wh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~ 420 (480)
-++.+..+.+.||+...+| ||++..|+.||++|++.+.+ +++ .+ .|++||+++||+|.+|...+ +++++.+
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~-~~--~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH-TQ--ALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE-EE--EECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE-EE--EeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 3678899999999999988 99889999999999999887 233 33 69999999999999998766 5788998
Q ss_pred EEEEecC
Q 048197 421 ISFKTND 427 (480)
Q Consensus 421 v~f~ts~ 427 (480)
+.+....
T Consensus 93 ~~v~~~~ 99 (113)
T 2gu9_A 93 VNFYHPP 99 (113)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 8876543
No 83
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.75 E-value=3.8e-08 Score=100.93 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=73.1
Q ss_pred cCCceEEEeCCCC--hhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccc
Q 048197 61 SEAGVTEFWDQND--EQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSR 138 (480)
Q Consensus 61 se~G~~e~~~~~~--~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~ 138 (480)
.+++.+++.++.. +.+. .+++....|+||+...||||...+++||++|+|++.+ |. +
T Consensus 248 ~~G~~~~~~np~t~~~~~~--ti~~~~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v---~~-~--------------- 306 (354)
T 2d40_A 248 WDGYKMRYVNPVTGGYPMP--SMGAFLQLLPKGFASRVARTTDSTIYHVVEGSGQVII---GN-E--------------- 306 (354)
T ss_dssp TTBEEEEECCTTTSSCSSS--SCEEEEEEECTTCBCCCBEESSCEEEEEEEEEEEEEE---TT-E---------------
T ss_pred CCCeEEEEeCCCcCCCCCC--cceeEEEEECCCCCCCceecCCcEEEEEEeCeEEEEE---CC-E---------------
Confidence 3466777777542 3444 3556677999999999999987799999999999998 32 3
Q ss_pred cccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 139 SQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 139 ~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
..++++||+++||++..|++.|+ ++++++++.|
T Consensus 307 -------~~~~~~GD~~~vP~~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 307 -------TFSFSAKDIFVVPTWHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp -------EEEEETTCEEEECTTCCEEEEEE--EEEEEEEEES
T ss_pred -------EEEEcCCCEEEECCCCeEEEEeC--CCEEEEEEcC
Confidence 47999999999999999999995 7799988865
No 84
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.74 E-value=1.8e-07 Score=85.81 Aligned_cols=95 Identities=13% Similarity=0.066 Sum_probs=74.3
Q ss_pred CCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC
Q 048197 326 RGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ 405 (480)
Q Consensus 326 ~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq 405 (480)
.+...+.+...+.+. ...++.+..+.|.||+...+|||+ ..|++||++|++.+.+- ++ .+ .|++||+++||.
T Consensus 37 ~g~~~~~L~~~~~g~-~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~i~---~~-~~--~l~~Gd~i~ip~ 108 (167)
T 3ibm_A 37 SGARRQTLVGRPAGQ-EAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEVVLD---DR-VE--PLTPLDCVYIAP 108 (167)
T ss_dssp CCEEEEEEECTTTTC-CSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEEEET---TE-EE--EECTTCEEEECT
T ss_pred CCcEEEEEECCCCCC-CCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEEEEC---CE-EE--EECCCCEEEECC
Confidence 455666666554321 223588899999999999999996 78999999999998762 23 34 699999999999
Q ss_pred CcEEEEEc-C-CCCeEEEEEEecCC
Q 048197 406 GFAVVKRA-S-NRGLEWISFKTNDV 428 (480)
Q Consensus 406 g~~~~~~a-g-~e~l~~v~f~ts~~ 428 (480)
|.+|...+ + ++++.++++...+.
T Consensus 109 ~~~H~~~n~~~~~~~~~l~i~~~~~ 133 (167)
T 3ibm_A 109 HAWHQIHATGANEPLGFLCIVDSDR 133 (167)
T ss_dssp TCCEEEEEESSSCCEEEEEEEESSC
T ss_pred CCcEEEEeCCCCCCEEEEEEEeCCc
Confidence 99998754 7 78999998876543
No 85
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.73 E-value=1.2e-07 Score=86.09 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=66.7
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
.++.+..+.|.||+...+|||+. .|++||++|++.+.+ +|+ .+ .|++||+++||.|.+|...+ +++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v---~g~-~~--~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~ 114 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLV---GET-IS--DVAQGDLVFIPPMTWHQFRANRGDCLGFLC 114 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEE---TTE-EE--EEETTCEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE---CCE-EE--EeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 46888899999999999999975 699999999999986 233 34 69999999999999998866 688999999
Q ss_pred EEecCCC
Q 048197 423 FKTNDVA 429 (480)
Q Consensus 423 f~ts~~~ 429 (480)
+...+..
T Consensus 115 i~~~~~d 121 (156)
T 3kgz_A 115 VVNAARD 121 (156)
T ss_dssp EEESSCC
T ss_pred EEeCCCC
Confidence 8865543
No 86
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.72 E-value=5.7e-08 Score=82.09 Aligned_cols=72 Identities=10% Similarity=0.220 Sum_probs=60.6
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.++.+.++++.||+...+|+|+..+++||++|++.+.+ .+ +...+++||++++|
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~--~~------------------------~~~~l~~Gd~~~ip 91 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI--DQ------------------------ETYRVAEGQTIVMP 91 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEE--TT------------------------EEEEEETTCEEEEC
T ss_pred CceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEE--CC------------------------EEEEECCCCEEEEC
Confidence 46788899999999988999999999999999999875 11 24799999999999
Q ss_pred CCCEEEEEcCCCCcEEEE
Q 048197 159 TGSANWIYNDGPSELVVV 176 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v 176 (480)
+|.+|++.|.++..+.++
T Consensus 92 ~~~~H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 92 AGIPHALYAVEAFQMLLV 109 (115)
T ss_dssp TTSCEEEEESSCEEEEEE
T ss_pred CCCCEEEEECCCceEEEE
Confidence 999999999885444333
No 87
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.71 E-value=7.9e-08 Score=81.32 Aligned_cols=73 Identities=10% Similarity=0.086 Sum_probs=62.1
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
++.+.++++.||+...+|+|+..+++||++|++.+.+ +. +...+++||++++|+
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~-----------------------~~~~l~~Gd~~~ip~ 86 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV---DG-----------------------VIKVLTAGDSFFVPP 86 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE---TT-----------------------EEEEECTTCEEEECT
T ss_pred ceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE---CC-----------------------EEEEeCCCCEEEECc
Confidence 5788899999999888999999999999999999876 21 247999999999999
Q ss_pred CCEEEEEcCCCCcEEEEEEee
Q 048197 160 GSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~~d 180 (480)
|.+|.+.|.+ +..++.++.
T Consensus 87 ~~~H~~~~~~--~~~~l~v~~ 105 (116)
T 2pfw_A 87 HVDHGAVCPT--GGILIDTFS 105 (116)
T ss_dssp TCCEEEEESS--CEEEEEEEE
T ss_pred CCceeeEeCC--CcEEEEEEC
Confidence 9999999987 455565554
No 88
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.70 E-value=1.4e-07 Score=93.18 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=73.7
Q ss_pred ceEE-EeCCCChhccccCeeEEEEEEcCCeeecC-cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhccccccccccc
Q 048197 64 GVTE-FWDQNDEQLQCANVAVFRHRIQQRGLVVP-SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQD 141 (480)
Q Consensus 64 G~~e-~~~~~~~~l~~~gvs~~r~~i~p~gl~lP-h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d 141 (480)
+.+. ..++.+ + ..++.+..++++||+.... |.|...+.+||++|+|++.+ +.
T Consensus 171 ~~~~r~l~p~~--~-~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l---~~-------------------- 224 (266)
T 4e2q_A 171 VFELRKLLPMS--V-AYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRL---GD-------------------- 224 (266)
T ss_dssp CSEEEESSCCS--T-TCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEE---TT--------------------
T ss_pred cEEEEEccCcc--c-ccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEE---CC--------------------
Confidence 4444 444443 3 5589999999999998875 55678899999999999986 11
Q ss_pred ccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 142 QHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 142 ~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
+...|++||++++|++.+||++|.|++++..|.--|.+-
T Consensus 225 ---~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd~nr 263 (266)
T 4e2q_A 225 ---NWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKDVNR 263 (266)
T ss_dssp ---EEEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEECSS
T ss_pred ---EEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEccccC
Confidence 257999999999999999999999999999987667653
No 89
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.70 E-value=9.3e-08 Score=93.45 Aligned_cols=79 Identities=13% Similarity=0.097 Sum_probs=65.5
Q ss_pred cCeeEEEEEEcCCeeecCccc-CCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 79 ANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
..+.+.+++++||+-..+||| ...|++||++|++.+.+ +. +...|++||++++
T Consensus 177 ~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i---~~-----------------------~~~~l~~GD~i~~ 230 (261)
T 1rc6_A 177 FDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL---DN-----------------------NWIPVKKGDYIFM 230 (261)
T ss_dssp CSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES---SS-----------------------CEEEEETTCEEEE
T ss_pred CceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE---CC-----------------------EEEEeCCCCEEEE
Confidence 467789999999998888887 47899999999999875 21 2579999999999
Q ss_pred CCCCEEEEEcCCC-CcEEEEEEeeCCC
Q 048197 158 PTGSANWIYNDGP-SELVVVALVDVGN 183 (480)
Q Consensus 158 PaG~~h~~~N~G~-~~l~~v~~~d~~n 183 (480)
|+|.+|++.|.|+ +++.++.+.|++-
T Consensus 231 ~~~~~H~~~n~g~~~~~~~l~~~d~~r 257 (261)
T 1rc6_A 231 GAYSLQAGYGVGRGEAFSYIYSKDCNR 257 (261)
T ss_dssp CSSEEEEEEEC----CEEEEEEEECSC
T ss_pred CCCCcEEeEeCCCCcCEEEEEEecCCC
Confidence 9999999999999 9999998888653
No 90
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.69 E-value=1e-07 Score=82.00 Aligned_cols=75 Identities=17% Similarity=0.172 Sum_probs=63.5
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
++.+.++.+.||+...+|||+. .|++||++|++.+.+ +|+ .+ .|++||+++||.|.+|...+..+.+.++.++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~---~~~-~~--~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v~ 112 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI---GEE-TR--VLRPGMAYTIPGGVRHRARTFEDGCLVLDIF 112 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE---TTE-EE--EECTTEEEEECTTCCEEEECCTTCEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE---CCE-EE--EeCCCCEEEECCCCcEEeEECCCCEEEEEEE
Confidence 5889999999999999999986 899999999999987 233 33 6999999999999999987754478888776
Q ss_pred ec
Q 048197 425 TN 426 (480)
Q Consensus 425 ts 426 (480)
+.
T Consensus 113 ~p 114 (126)
T 4e2g_A 113 SP 114 (126)
T ss_dssp ES
T ss_pred CC
Confidence 53
No 91
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.69 E-value=3.1e-08 Score=96.34 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=66.1
Q ss_pred ccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEE-------ecC------Cc-eEEeeecCCccEEEECCCcE
Q 048197 343 YIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIV-------AEN------GE-NVFDGQIREGQLIVVPQGFA 408 (480)
Q Consensus 343 ~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv-------~~~------G~-~~f~~~l~~GdV~vVPqg~~ 408 (480)
..++++..+.+.||+...||||++..|+.||++|++.+.+- +.. |+ +++...+++||+++||+|.+
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 34688999999999999999999999999999999999771 111 11 23345799999999999999
Q ss_pred EEEEc-CCCCeEE-EEEE
Q 048197 409 VVKRA-SNRGLEW-ISFK 424 (480)
Q Consensus 409 ~~~~a-g~e~l~~-v~f~ 424 (480)
|...| +++++++ +.+.
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 99765 6777888 5655
No 92
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.67 E-value=1.1e-07 Score=86.84 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=77.3
Q ss_pred CcccCCCeEEEEEecCCCCcccccceeEEeeeecccccc-ccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCcc
Q 048197 321 DAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMM-APHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQ 399 (480)
Q Consensus 321 ~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~-~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~Gd 399 (480)
+...+..|..+..-+.. ...-++.+..+.|.||+-. .+|||+...|++||++|++.+.+- ++ .+ .|++||
T Consensus 21 p~~~~~~G~~~~~l~~~---~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~-~~--~l~~GD 91 (163)
T 3i7d_A 21 RLNAAMDGRSSLRLGDA---GGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD---QG-EH--PMVPGD 91 (163)
T ss_dssp GGGGGGTTEEEEEHHHH---TTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET---TE-EE--EECTTC
T ss_pred CccccCCCeEEEEcccC---CCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC---CE-EE--EeCCCC
Confidence 34455677776665432 2333689999999999965 799999989999999999998873 23 33 699999
Q ss_pred EEEECCC--cEEEEEc-CCCCeEEEEEEecCC
Q 048197 400 LIVVPQG--FAVVKRA-SNRGLEWISFKTNDV 428 (480)
Q Consensus 400 V~vVPqg--~~~~~~a-g~e~l~~v~f~ts~~ 428 (480)
+++||.| .+|...| +++.++++.+.+...
T Consensus 92 ~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~ 123 (163)
T 3i7d_A 92 CAAFPAGDPNGHQFVNRTDAPATFLVVGTRTP 123 (163)
T ss_dssp EEEECTTCCCCBEEECCSSSCEEEEEEEECCS
T ss_pred EEEECCCCCcceEEEECCCCCEEEEEEECCCC
Confidence 9999999 9998765 688899999887654
No 93
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.66 E-value=4.3e-08 Score=95.34 Aligned_cols=108 Identities=13% Similarity=-0.007 Sum_probs=74.8
Q ss_pred ceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEc---C--CCc-cchhhhhh
Q 048197 58 RVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVF---P--GCP-ETYQESQQ 130 (480)
Q Consensus 58 ~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~---p--g~~-etf~~~~~ 130 (480)
.+.+.+|.+..+-. ......++++.++++.||+...||||. ..|++||++|++.+.+-. | +.. ..+.
T Consensus 22 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~---- 95 (239)
T 2xlg_A 22 LIYTPANEIFDIAS--CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGG---- 95 (239)
T ss_dssp EEECTTCCEEEEEE--EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTT----
T ss_pred eeecCCceEEEEec--cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccc----
Confidence 35666676654422 112234678889999999999999987 889999999999986511 1 110 0000
Q ss_pred cccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEE-EEEe
Q 048197 131 RSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVV-VALV 179 (480)
Q Consensus 131 ~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~-v~~~ 179 (480)
-.+.......+++||+++||+|++|.+.|.+++++.+ +.++
T Consensus 96 --------~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 96 --------AGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp --------TCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred --------cccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 0000011579999999999999999999999998887 5555
No 94
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.66 E-value=1e-07 Score=83.08 Aligned_cols=76 Identities=17% Similarity=0.146 Sum_probs=56.1
Q ss_pred eeEEEEEEcCCeeecCcccCC-CeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 81 VAVFRHRIQQRGLVVPSYTNT-PELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 81 vs~~r~~i~p~gl~lPh~~~a-~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
+.+.++.+.|++...+|||+. .+++||++|++.+.+- ++ +...|++||+++||+
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~--~~-----------------------~~~~l~~Gd~~~ip~ 97 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYE--DI-----------------------GAVMLEAGGSAFQPP 97 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEET--TT-----------------------EEEEEETTCEEECCT
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEEC--Cc-----------------------EEEEecCCCEEEECC
Confidence 346666667888888999986 9999999999998762 21 147999999999999
Q ss_pred CCEEEEEcCCCCcEEEEEEeeCC
Q 048197 160 GSANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
|++|++.|.+++ +.+++++...
T Consensus 98 g~~H~~~~~~~~-~~~l~~~~p~ 119 (134)
T 2o8q_A 98 GVRHRELRHSDD-LEVLEIVSPA 119 (134)
T ss_dssp TCCEEEEEECTT-CEEEEEESST
T ss_pred CCcEEeEeCCCC-eEEEEEECCC
Confidence 999999998774 5666665443
No 95
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.66 E-value=5.8e-08 Score=89.92 Aligned_cols=80 Identities=13% Similarity=0.076 Sum_probs=68.7
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.|..+.+++|.||+-..+|.|...+++||++|+..+.+-. | +.+.|++||++ +|
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~-g------------------------e~~~L~~GDsi-~~ 130 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDD-G------------------------AKRTVRQGGII-VQ 130 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGG-G------------------------CEEEECTTCEE-EE
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECC-C------------------------eEEEECCCCEE-Ee
Confidence 4888899999999999999998889999999999987510 1 14799999999 99
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCCC
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGNS 184 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n~ 184 (480)
+|.+|++.|.|++++++++++-...+
T Consensus 131 ~g~~H~~~N~g~~~ar~l~V~~P~~p 156 (172)
T 3es1_A 131 RGTNHLWRNTTDKPCRIAFILIEAPA 156 (172)
T ss_dssp CSCCBEEECCSSSCEEEEEEEEECCC
T ss_pred CCCcEEEEeCCCCCEEEEEEEcCCCc
Confidence 99999999999999999998765443
No 96
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.65 E-value=1e-07 Score=88.37 Aligned_cols=76 Identities=9% Similarity=0.080 Sum_probs=63.6
Q ss_pred ccCeeEEEEEEcCCeeec--CcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 78 CANVAVFRHRIQQRGLVV--PSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~l--Ph~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...+.+..+++.||+... +||+...|++||++|++.+.+ +. +...|++||++
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~---~~-----------------------~~~~l~~GD~i 154 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF---DE-----------------------QWHELQQGEHI 154 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE---TT-----------------------EEEEECTTCEE
T ss_pred CCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE---CC-----------------------EEEEeCCCCEE
Confidence 446888899999998765 566777899999999999876 22 25799999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
+||+|++|++.|.+++++ +++++.
T Consensus 155 ~i~~~~~H~~~n~~~~~~-~l~v~~ 178 (192)
T 1y9q_A 155 RFFSDQPHGYAAVTEKAV-FQNIVA 178 (192)
T ss_dssp EEECSSSEEEEESSSCEE-EEEEEE
T ss_pred EEcCCCCeEeECCCCCcE-EEEEEe
Confidence 999999999999999998 766653
No 97
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.65 E-value=2.8e-07 Score=89.58 Aligned_cols=80 Identities=10% Similarity=0.108 Sum_probs=68.8
Q ss_pred ccCeeEEEEEEcCCeeecC-cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLVVP-SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lP-h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
..++.+..++|+||+-.-. +.|...+.+||++|++.+.+ +. +.+.|++||.++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~---~~-----------------------~~~~l~~GD~~~ 215 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL---EE-----------------------NYYPVTAGDIIW 215 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE---TT-----------------------EEEEEETTCEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE---CC-----------------------EEEEcCCCCEEE
Confidence 4578899999999997664 44668899999999999986 21 257999999999
Q ss_pred eCCCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 157 LPTGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
++++.+|+++|.|++++.++.+-|.+-
T Consensus 216 ~~~~~pH~~~n~g~~~~~yl~~kd~~r 242 (246)
T 1sfn_A 216 MGAHCPQWYGALGRNWSKYLLYKDMNR 242 (246)
T ss_dssp ECTTCCEEEEEESSSCEEEEEEEECSS
T ss_pred ECCCCCEEEEcCCCCCEEEEEEEeccc
Confidence 999999999999999999998888764
No 98
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.64 E-value=7.6e-08 Score=95.40 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=69.2
Q ss_pred cCeeEEEEEEcCCeeecC-cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 79 ANVAVFRHRIQQRGLVVP-SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lP-h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
.++.+..++|+||+-... |+|.-.+.+||++|+|.+.+ +. +...|++||++++
T Consensus 189 ~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~---~~-----------------------~~~~v~~GD~~~~ 242 (278)
T 1sq4_A 189 HDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL---NQ-----------------------DWVEVEAGDFMWL 242 (278)
T ss_dssp CSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE---TT-----------------------EEEEEETTCEEEE
T ss_pred CCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE---CC-----------------------EEEEeCCCCEEEE
Confidence 478899999999997764 45667799999999999976 21 2579999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeCCCC
Q 048197 158 PTGSANWIYNDGPSELVVVALVDVGNS 184 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~~n~ 184 (480)
++|.+|+++|.|+++++++.+.|++-.
T Consensus 243 ~~~~~h~~~n~g~~~~~yl~~~d~nr~ 269 (278)
T 1sq4_A 243 RAFCPQACYSGGPGRFRYLLYKDVNRH 269 (278)
T ss_dssp EESCCEEEECCSSSCEEEEEEEECSSC
T ss_pred CCCCCEEEEcCCCCCEEEEEEEEcCCC
Confidence 999999999999999999999998754
No 99
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.63 E-value=1.1e-07 Score=82.48 Aligned_cols=73 Identities=15% Similarity=0.237 Sum_probs=60.8
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
.+++..+.+.||+- .|||...+|+.||++|++++++ +|+. + .|++||+++||+|..|...+.++.++++.+.
T Consensus 39 ~~~~~~~~~~pG~~--~~~H~~~~E~~~Vl~G~~~~~~---~g~~-~--~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQS--LTETMAVDDVMIVLEGRLSVST---DGET-V--TAGPGEIVYMPKGETVTIRSHEEGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCE--EEEECSSEEEEEEEEEEEEEEE---TTEE-E--EECTTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECCCCC--cCccCCCCEEEEEEeCEEEEEE---CCEE-E--EECCCCEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 58999999999974 5788889999999999999998 3543 3 6999999999999999987765667776655
Q ss_pred e
Q 048197 425 T 425 (480)
Q Consensus 425 t 425 (480)
+
T Consensus 111 ~ 111 (119)
T 3lwc_A 111 Y 111 (119)
T ss_dssp E
T ss_pred C
Confidence 4
No 100
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.62 E-value=2.6e-07 Score=82.73 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=73.9
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
.++.+.++.+.||+...+|||+. .|++||++|++.+.+= ++..+ .|++||+++||+|.+|...+ +++.+.+++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~---~~~~~--~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 119 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQER---GKPAR--ILKKGDVVEIPPNVVHWHGAAPDEELVHIG 119 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEET---TSCCE--EEETTCEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEEC---CEEEE--EECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 36899999999999999999987 8999999999998762 33213 69999999999999998765 678899998
Q ss_pred EEecCCCcceeeccccccccCCCHHHHHH
Q 048197 423 FKTNDVAKTSQLAGRASVIRGLPLDVIQN 451 (480)
Q Consensus 423 f~ts~~~~~~~LAG~~svl~~lp~eVla~ 451 (480)
+....... ...|+..+.++...+
T Consensus 120 v~~~~~~~------~~~wl~~v~~e~~~~ 142 (147)
T 2f4p_A 120 ISTQVHLG------PAEWLGSVTEEEYRK 142 (147)
T ss_dssp EECCGGGC------CCEECCCCCHHHHHH
T ss_pred EEccCCCC------CceecccCCHHHhhh
Confidence 87543211 135666666655543
No 101
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.62 E-value=1.9e-07 Score=78.92 Aligned_cols=75 Identities=19% Similarity=0.143 Sum_probs=62.7
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
++.+..+.+.||+...+|||+ ..|+.||++|++.+.+ +|+ .+ .|++||+++||+|.+|...+.. +++++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~-~~--~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV---DGV-IK--VLTAGDSFFVPPHVDHGAVCPT-GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE---TTE-EE--EECTTCEEEECTTCCEEEEESS-CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE---CCE-EE--EeCCCCEEEECcCCceeeEeCC-CcEEEEEE
Confidence 478899999999999999998 7899999999999887 343 33 6999999999999999987654 67777776
Q ss_pred ecC
Q 048197 425 TND 427 (480)
Q Consensus 425 ts~ 427 (480)
+..
T Consensus 105 ~p~ 107 (116)
T 2pfw_A 105 SPA 107 (116)
T ss_dssp ESC
T ss_pred CCc
Confidence 543
No 102
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.61 E-value=1.4e-07 Score=82.16 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=58.0
Q ss_pred eEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEEEe
Q 048197 347 SAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKT 425 (480)
Q Consensus 347 sa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f~t 425 (480)
.+.++.+.||+...+|||+...|+.||++|++++.+-+ + ..+ .|++||+++||+|.+|...+ ++ .++++.+..
T Consensus 44 ~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~-~~~--~l~~Gd~~~ip~g~~H~~~~~~~-~~~~l~~~~ 117 (134)
T 2o8q_A 44 HVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED--I-GAV--MLEAGGSAFQPPGVRHRELRHSD-DLEVLEIVS 117 (134)
T ss_dssp EEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT--T-EEE--EEETTCEEECCTTCCEEEEEECT-TCEEEEEES
T ss_pred EEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC--c-EEE--EecCCCEEEECCCCcEEeEeCCC-CeEEEEEEC
Confidence 35555566899999999998899999999999988732 1 333 69999999999999999876 55 578887765
Q ss_pred cCCCccee
Q 048197 426 NDVAKTSQ 433 (480)
Q Consensus 426 s~~~~~~~ 433 (480)
.......+
T Consensus 118 p~~~~~~~ 125 (134)
T 2o8q_A 118 PAGFATSV 125 (134)
T ss_dssp STTCCEEE
T ss_pred CCchheee
Confidence 54444433
No 103
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.61 E-value=2e-07 Score=79.33 Aligned_cols=75 Identities=17% Similarity=0.328 Sum_probs=62.0
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
++.+..+.+.||+...+||| ...+++||++|++.+.+ ++.... .|++||+++||+|.+|...+ +++++.++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H-~~~e~~~Vl~G~~~~~i---~~~~~~--~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYS-NSYVHLIIIKGEMTLTL---EDQEPH--NYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEEC-SSCEEEEEEESEEEEEE---TTSCCE--EEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeC-CCcEEEEEEeCEEEEEE---CCEEEE--EeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 46777889999999999999 46899999999999887 233321 59999999999999998866 5677888887
Q ss_pred Ee
Q 048197 424 KT 425 (480)
Q Consensus 424 ~t 425 (480)
..
T Consensus 100 ~~ 101 (117)
T 2b8m_A 100 KA 101 (117)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 104
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.61 E-value=2.6e-07 Score=84.85 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=65.5
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
.++.+..+.|.||+...+|||+. .|++||++|++.+.+ +|+ .+ .|++||+++||.|.+|...+ +++++.+++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v---~g~-~~--~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~ 123 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMV---GRA-VS--AVAPYDLVTIPGWSWHQFRAPADEALGFLC 123 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEE---TTE-EE--EECTTCEEEECTTCCEEEECCTTSCEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE---CCE-EE--EeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 46888899999999999999986 699999999999876 233 34 69999999999999998866 688999998
Q ss_pred EEecC
Q 048197 423 FKTND 427 (480)
Q Consensus 423 f~ts~ 427 (480)
+...+
T Consensus 124 i~~~~ 128 (166)
T 3jzv_A 124 MVNAE 128 (166)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 87654
No 105
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.61 E-value=1.8e-07 Score=81.24 Aligned_cols=75 Identities=12% Similarity=0.151 Sum_probs=59.0
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
...+++..++++||+-.-.|+ +..|++||++|++.+.+ +. +...|++||+++|
T Consensus 37 ~~~~~~~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~---~g-----------------------~~~~l~~GD~v~i 89 (119)
T 3lwc_A 37 GGPITIGYGRYAPGQSLTETM-AVDDVMIVLEGRLSVST---DG-----------------------ETVTAGPGEIVYM 89 (119)
T ss_dssp -CCCEEEEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEE---TT-----------------------EEEEECTTCEEEE
T ss_pred CCCEEEEEEEECCCCCcCccC-CCCEEEEEEeCEEEEEE---CC-----------------------EEEEECCCCEEEE
Confidence 346888899999998653343 78999999999999987 22 2479999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEee
Q 048197 158 PTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d 180 (480)
|+|..|++.|.+ ++..++++..
T Consensus 90 p~g~~H~~~~~~-~~~~~l~v~~ 111 (119)
T 3lwc_A 90 PKGETVTIRSHE-EGALTAYVTY 111 (119)
T ss_dssp CTTCEEEEEEEE-EEEEEEEEEE
T ss_pred CCCCEEEEEcCC-CCeEEEEEEC
Confidence 999999998865 5666666553
No 106
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.59 E-value=2.2e-07 Score=80.02 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=62.8
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
..+++..+.+.||....+||| +..|+.||++|++.+.+ +|+ .+ .+++||+++||+|-+|...+ +++++++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~~~Ei~~v~~G~~~~~i---~~~-~~--~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~ 104 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-NEYELFIVIQGNAIIRI---NDE-DF--PVTKGDLIIIPLDSEHHVINNNQEDFHFYT 104 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-SSEEEEEEEESEEEEEE---TTE-EE--EEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CCcEEEEEEECCCCccCCEec-CCeEEEEEEeCEEEEEE---CCE-EE--EECCCcEEEECCCCcEEeEeCCCCCEEEEE
Confidence 357888999999999999999 68999999999999888 333 34 69999999999999998765 577888876
Q ss_pred EE
Q 048197 423 FK 424 (480)
Q Consensus 423 f~ 424 (480)
+.
T Consensus 105 i~ 106 (128)
T 4i4a_A 105 IW 106 (128)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 107
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.59 E-value=4.6e-08 Score=82.07 Aligned_cols=77 Identities=14% Similarity=0.125 Sum_probs=64.3
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
-.+.+.+++|.||+-...|+|+...++.||++|+++++. .+|.. ....+++||.+++|.|..|...| |+++|+||.
T Consensus 15 ~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~-~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTR-SLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCE-ECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred CeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCce-EEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 357889999999999999999999999999999998764 44442 23369999999999999999855 799999987
Q ss_pred E
Q 048197 423 F 423 (480)
Q Consensus 423 f 423 (480)
+
T Consensus 92 V 92 (98)
T 3lag_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 6
No 108
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.59 E-value=8.7e-08 Score=79.36 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=63.7
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
++.+.++.|.||+-..+|.|+...++.||++|++.+++-+ |...+ .|++||.+++|.|.+|...| ++++++++.+
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--g~~~~--~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE--GSVTS--QLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT--EEEEE--EECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC--CCEEE--EEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 5788999999999999999998878999999999987632 31233 69999999999999999765 6788998876
Q ss_pred E
Q 048197 424 K 424 (480)
Q Consensus 424 ~ 424 (480)
.
T Consensus 93 ~ 93 (97)
T 2fqp_A 93 E 93 (97)
T ss_dssp E
T ss_pred E
Confidence 4
No 109
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.57 E-value=3.3e-07 Score=95.12 Aligned_cols=90 Identities=11% Similarity=0.116 Sum_probs=72.2
Q ss_pred EEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccce
Q 048197 66 TEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQK 145 (480)
Q Consensus 66 ~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk 145 (480)
+++.++....-....+.+...+|.||+-..||.|...+++||++|+|.+.+ +. +
T Consensus 279 l~l~nP~~g~~~~~tl~~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V---~g-----------------------e 332 (394)
T 3bu7_A 279 LRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIV---GG-----------------------K 332 (394)
T ss_dssp EEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEE---TT-----------------------E
T ss_pred EEEeCCCCCCCCCCeeeEEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEE---CC-----------------------E
Confidence 344455442212335777888999999999999998899999999997765 22 2
Q ss_pred eEeecCCcEEEeCCCCEEEEEcCC-CCcEEEEEEeeC
Q 048197 146 VRQIREGDLVALPTGSANWIYNDG-PSELVVVALVDV 181 (480)
Q Consensus 146 ~~~l~~GDV~~iPaG~~h~~~N~G-~~~l~~v~~~d~ 181 (480)
...+++||+|++|+|..|.+.|+| ++++.++++.|.
T Consensus 333 ~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~D~ 369 (394)
T 3bu7_A 333 RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFNDF 369 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEEESH
T ss_pred EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEeeCH
Confidence 479999999999999999999998 799999988663
No 110
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.56 E-value=2.8e-07 Score=78.80 Aligned_cols=77 Identities=18% Similarity=0.165 Sum_probs=58.8
Q ss_pred ccccCeeEEEEEEcCCeeecC---cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhccccccccccccccee--Eeec
Q 048197 76 LQCANVAVFRHRIQQRGLVVP---SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKV--RQIR 150 (480)
Q Consensus 76 l~~~gvs~~r~~i~p~gl~lP---h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~--~~l~ 150 (480)
+.+.++.+.++. .++....+ ++++..|++||++|++.+.+ +. +. ..|+
T Consensus 26 ~~~~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~---~~-----------------------~~~~~~l~ 78 (112)
T 2opk_A 26 LERKGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC---EG-----------------------DTAPRVMR 78 (112)
T ss_dssp EEETTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE---TT-----------------------CSSCEEEC
T ss_pred ecCCCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEE---CC-----------------------EEEEEEEC
Confidence 456678887775 33444444 44578899999999999976 21 13 6899
Q ss_pred CCcEEEeCCCCEEEEEcCCCC-cEEEEEEe
Q 048197 151 EGDLVALPTGSANWIYNDGPS-ELVVVALV 179 (480)
Q Consensus 151 ~GDV~~iPaG~~h~~~N~G~~-~l~~v~~~ 179 (480)
+||.++||+|.+|.+.|.+++ +.++++++
T Consensus 79 ~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~ 108 (112)
T 2opk_A 79 PGDWLHVPAHCRHRVAWTDGGEPTVWLAVH 108 (112)
T ss_dssp TTEEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred CCCEEEECCCCcEEEEeCCCCCCEEEEEEE
Confidence 999999999999999999875 67767765
No 111
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.56 E-value=2.3e-07 Score=77.29 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=58.7
Q ss_pred ccCeeEEEEEEcCCeeecCcccCC-CeE-EEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNT-PEL-FYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a-~el-~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+.++.+.++++.||....+|+|+. .++ +||++|++.+.+ .+. +...|++||++
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~--~~~-----------------------~~~~l~~Gd~~ 84 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG--DGD-----------------------AVIPAPRGAVL 84 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC--GGG-----------------------CEEEECTTEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe--CCC-----------------------EEEEECCCCEE
Confidence 457888899999999888899985 788 899999999864 101 14799999999
Q ss_pred EeCCCCEEEEEcCCCCcE
Q 048197 156 ALPTGSANWIYNDGPSEL 173 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l 173 (480)
++|+|..|++.|.++..+
T Consensus 85 ~ip~~~~H~~~~~~~~~~ 102 (110)
T 2q30_A 85 VAPISTPHGVRAVTDMKV 102 (110)
T ss_dssp EEETTSCEEEEESSSEEE
T ss_pred EeCCCCcEEEEEcCCcEE
Confidence 999999999999877543
No 112
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.56 E-value=2.6e-07 Score=79.58 Aligned_cols=80 Identities=15% Similarity=0.203 Sum_probs=63.4
Q ss_pred ccceeEEeeeeccccccc-cccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEE
Q 048197 343 YIQLSAEKGNLYQNAMMA-PHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEW 420 (480)
Q Consensus 343 ~l~lsa~~v~L~pgam~~-PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~ 420 (480)
.-++.+..+.+.||+... ||||+...++.||++|++.+.+ +++ .+ .|++||+++||+|.+|...+ +++++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~-~~--~l~~Gd~i~i~~~~~H~~~~~~~~~~~~ 96 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE-KI--ELQAGDWLRIAPDGKRQISAASDSPIGF 96 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE-EE--EEETTEEEEECTTCCEEEEEBTTBCEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE-EE--EeCCCCEEEECCCCcEEEEcCCCCCEEE
Confidence 446788889999999887 8999766566669999999887 233 33 69999999999999998765 5778998
Q ss_pred EEEEecCC
Q 048197 421 ISFKTNDV 428 (480)
Q Consensus 421 v~f~ts~~ 428 (480)
+.+.....
T Consensus 97 ~~i~~~~~ 104 (125)
T 3cew_A 97 LCIQVKAG 104 (125)
T ss_dssp EEEEEETT
T ss_pred EEEEcCCc
Confidence 87765443
No 113
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.56 E-value=2.6e-07 Score=80.93 Aligned_cols=80 Identities=13% Similarity=0.241 Sum_probs=64.8
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
++++..+.+.||+...+|||+.. +++||++|++.+.+... |+ .+ .+++||+++||+|.+|...+ +++++.++.+
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~-e~~~vl~G~~~~~~~~~-~~-~~--~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i 112 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHEWE-HEIYVLEGSMGLVLPDQ-GR-TE--EVGPGEAIFIPRGEPHGFVTGPGQTCRFLVV 112 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECSSC-EEEEEEEECEEEEEGGG-TE-EE--EECTTCEEEECTTCCBEEECCTTCCEEEEEE
T ss_pred cEEEEEEEECCCCcCCCccCCCc-eEEEEEEeEEEEEEeEC-CE-EE--EECCCCEEEECCCCeEEeEcCCCCCEEEEEE
Confidence 68899999999999999999854 66799999999873122 22 33 69999999999999999866 5778999988
Q ss_pred EecCCC
Q 048197 424 KTNDVA 429 (480)
Q Consensus 424 ~ts~~~ 429 (480)
.+...+
T Consensus 113 ~~~~~~ 118 (145)
T 3ht1_A 113 APCERP 118 (145)
T ss_dssp EESCCC
T ss_pred ECCCCC
Confidence 766544
No 114
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.55 E-value=3.1e-07 Score=80.54 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=62.6
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
.+.+..+.+.||+...+|||+...|++||++|++.+.+- ++ .+ .|++||++++|.+.+|...+ +++++.++.+
T Consensus 56 ~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~---~~-~~--~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 56 ARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN---GK-DV--PIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET---TE-EE--EEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC---CE-EE--EeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 467788999999999999998889999999999998762 33 34 69999999999999998766 5788888775
Q ss_pred E
Q 048197 424 K 424 (480)
Q Consensus 424 ~ 424 (480)
.
T Consensus 130 ~ 130 (133)
T 1o4t_A 130 I 130 (133)
T ss_dssp E
T ss_pred E
Confidence 4
No 115
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.54 E-value=2.5e-07 Score=80.22 Aligned_cols=76 Identities=11% Similarity=0.106 Sum_probs=64.2
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
-++.+..+.+.||+...+|||+ ..|+.||++|++++.+ +++ .+ .|++||+++||+|.+|...+ +++++.++.
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i---~~~-~~--~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 46 PNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLK---EQG-EE--TVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp SSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEEC---SSC-EE--EEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEE---CCE-EE--EECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 3688999999999999999997 7899999999999876 233 33 69999999999999998866 577899888
Q ss_pred EEec
Q 048197 423 FKTN 426 (480)
Q Consensus 423 f~ts 426 (480)
+...
T Consensus 119 v~~~ 122 (126)
T 1vj2_A 119 LIPK 122 (126)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 7643
No 116
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.53 E-value=2.8e-05 Score=75.45 Aligned_cols=88 Identities=16% Similarity=0.222 Sum_probs=61.7
Q ss_pred ccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhh
Q 048197 49 DLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQES 128 (480)
Q Consensus 49 ~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~ 128 (480)
.+.+.+|- -+++.-.|.+. -++++..+.+ .+....-.| ..+|++||++|+..+.. +. +
T Consensus 26 ~~~~~dp~-----~~~r~~~~~~~------~~~~~G~~~~-~g~~~v~~~-p~dE~~~VleG~~~lt~---~g-~----- 83 (238)
T 3myx_A 26 PIDAHDPF-----DSGRRTAFVDE------QGIAAGIVEF-GTALSVEAY-PYTEMLVMHRGSVTLTS---GT-D----- 83 (238)
T ss_dssp CSSTTCSC-----STTEEEEEECT------TSEEEEEEEE-CSEEEESSC-SSEEEEEEEESEEEEEE---TT-E-----
T ss_pred ccCCCCcc-----ccceEEecCCC------CCeEEEEEEe-ccccccccC-CCcEEEEEEEeEEEEEC---CC-e-----
Confidence 55566662 23333355443 2688888888 666655333 35899999999999986 32 2
Q ss_pred hhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEE
Q 048197 129 QQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVV 175 (480)
Q Consensus 129 ~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~ 175 (480)
...+++||+++||+|+.+-+...+...+++
T Consensus 84 -----------------~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y 113 (238)
T 3myx_A 84 -----------------SVTLSTGESAVIGRGTQVRIDAQPESLWAF 113 (238)
T ss_dssp -----------------EEEEETTCEEEECTTCCEEEEECTTEEEEE
T ss_pred -----------------EEEEcCCCEEEECCCCEEEEEecCCeEEEE
Confidence 368999999999999999998866554433
No 117
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.52 E-value=2.7e-07 Score=89.28 Aligned_cols=75 Identities=9% Similarity=-0.019 Sum_probs=64.7
Q ss_pred eeEEEEEEcC-CeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 81 VAVFRHRIQQ-RGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 81 vs~~r~~i~p-~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
+.+..++++| |+...+|+|...+++||++|++.+.+ +. +...|++||+++||+
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i---~~-----------------------~~~~l~~Gd~i~ip~ 198 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTV---EG-----------------------CTVEMKFGTAYFCEP 198 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCSSEEEEEECSSCEEEEE---TT-----------------------EEEEECTTCEEEECT
T ss_pred eEEEEEEECCCCCcCCCEeCCCcEEEEEEECEEEEEE---CC-----------------------EEEEECCCCEEEECC
Confidence 4566778999 88888899998999999999999876 11 246899999999999
Q ss_pred CCEEEEEcCCCCcEEEEEEeeC
Q 048197 160 GSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~~d~ 181 (480)
|.+|+++|.|+++++++.++..
T Consensus 199 ~~~H~~~n~~~~~~~~l~v~~p 220 (243)
T 3h7j_A 199 REDHGAINRSEKESKSINIFFP 220 (243)
T ss_dssp TCCEEEEECSSSCEEEEEEEES
T ss_pred CCcEEeEeCCCCCEEEEEEEcC
Confidence 9999999999999999988754
No 118
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.52 E-value=3.7e-07 Score=77.22 Aligned_cols=71 Identities=13% Similarity=0.176 Sum_probs=58.3
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
.+.+..+++.|+.-..+|+|+..+++||++|++.+.+ +. +...|++||+++||+
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i---~~-----------------------~~~~l~~Gd~i~i~~ 90 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITF---DD-----------------------QKIDLVPEDVLMVPA 90 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE---TT-----------------------EEEEECTTCEEEECT
T ss_pred CceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEE---CC-----------------------EEEEecCCCEEEECC
Confidence 4566777889998888899999999999999999876 21 257999999999999
Q ss_pred CCEEEEEcCCCCcEEEEEE
Q 048197 160 GSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~ 178 (480)
|.+|.+.|.+ ++.++.+
T Consensus 91 ~~~H~~~~~~--~~~~~~i 107 (114)
T 2ozj_A 91 HKIHAIAGKG--RFKMLQI 107 (114)
T ss_dssp TCCBEEEEEE--EEEEEEE
T ss_pred CCcEEEEeCC--CcEEEEE
Confidence 9999999974 4555544
No 119
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.51 E-value=5.8e-07 Score=75.81 Aligned_cols=73 Identities=22% Similarity=0.321 Sum_probs=60.1
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
++.+..+.+.||+-..+|||+ ..++.||++|++.+.+ +|+ .+ .+++||+++||+|.+|...+.. +++++.+.
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~-~~--~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~ 110 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITI---DQE-TY--RVAEGQTIVMPAGIPHALYAVE-AFQMLLVV 110 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEE---TTE-EE--EEETTCEEEECTTSCEEEEESS-CEEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEE---CCE-EE--EECCCCEEEECCCCCEEEEECC-CceEEEEE
Confidence 578889999999999999997 5899999999999876 233 33 6999999999999999886643 57776654
Q ss_pred e
Q 048197 425 T 425 (480)
Q Consensus 425 t 425 (480)
.
T Consensus 111 ~ 111 (115)
T 1yhf_A 111 V 111 (115)
T ss_dssp E
T ss_pred E
Confidence 3
No 120
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.50 E-value=1.1e-06 Score=81.50 Aligned_cols=79 Identities=9% Similarity=0.057 Sum_probs=63.3
Q ss_pred ccceeEEeeeeccccccc---cccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEE-c-CCCC
Q 048197 343 YIQLSAEKGNLYQNAMMA---PHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKR-A-SNRG 417 (480)
Q Consensus 343 ~l~lsa~~v~L~pgam~~---PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~-a-g~e~ 417 (480)
.-.+.+..+.+.||+... +|||+. .|++||++|++.+.+-+..+...+ .|++||.++||.+.+|... . ++++
T Consensus 114 ~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~~~~~~~--~l~~GD~~~~~~~~~H~~~n~~~~~~ 190 (198)
T 2bnm_A 114 APSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDKENPKEA--LLPTGASMFVEEHVPHAFTAAKGTGS 190 (198)
T ss_dssp STTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCTTSCEEE--EECTTCEEEECTTCCEEEEESTTSCC
T ss_pred CCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCcCCcccE--EECCCCEEEeCCCCceEEEecCCCCC
Confidence 346899999999999987 689876 899999999999988331111344 7999999999999999875 4 5678
Q ss_pred eEEEEEE
Q 048197 418 LEWISFK 424 (480)
Q Consensus 418 l~~v~f~ 424 (480)
++++.+.
T Consensus 191 ~~~l~v~ 197 (198)
T 2bnm_A 191 AKLIAVN 197 (198)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 8888764
No 121
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.46 E-value=9.1e-07 Score=75.65 Aligned_cols=70 Identities=16% Similarity=0.178 Sum_probs=57.8
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWI 421 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v 421 (480)
-++.+.++.+.||+-..+|||+. .|++||++|++++.+ +++ .+ .|++||+++||.|.+|...|.. +..++
T Consensus 34 ~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i---~~~-~~--~l~~Gd~i~ip~~~~H~~~~~~-~~~~~ 103 (114)
T 3fjs_A 34 HRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGV---DGA-QR--RLHQGDLLYLGAGAAHDVNAIT-NTSLL 103 (114)
T ss_dssp TTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEE---TTE-EE--EECTTEEEEECTTCCEEEEESS-SEEEE
T ss_pred CCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEE---CCE-EE--EECCCCEEEECCCCcEEEEeCC-CcEEE
Confidence 36889999999999999999986 599999999999887 233 33 6999999999999999987642 34443
No 122
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.46 E-value=5.3e-07 Score=90.27 Aligned_cols=78 Identities=13% Similarity=0.203 Sum_probs=65.8
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
.+++..+.+.||+...+|||+++.|+.||++|++++++ +|+ .+ .|++||+++||.|.+|...+..+.++++.+.
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~~-~~--~l~~Gd~~~~p~~~~H~~~n~~~~~~~~~~~ 118 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DGE-RY--LLISGDYANIPAGTPHSYRMQSHRTRLVSYT 118 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TTE-EE--EECTTCEEEECTTCCEEEEECSTTEEEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CCE-EE--EECCCCEEEECCCCcEEEEECCCCeEEEEEE
Confidence 68899999999999999999889999999999999986 243 33 6999999999999999886643368888876
Q ss_pred ecCC
Q 048197 425 TNDV 428 (480)
Q Consensus 425 ts~~ 428 (480)
+...
T Consensus 119 ~p~~ 122 (337)
T 1y3t_A 119 MKGN 122 (337)
T ss_dssp ETTS
T ss_pred CCCC
Confidence 6554
No 123
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.45 E-value=5.6e-07 Score=82.82 Aligned_cols=73 Identities=19% Similarity=0.030 Sum_probs=61.9
Q ss_pred CeeEEEEEEcC-CeeecCcc-cCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 80 NVAVFRHRIQQ-RGLVVPSY-TNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 80 gvs~~r~~i~p-~gl~lPh~-~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
-++...++|.| |+-..|++ |.+.+++||++|+..+.+ +. +.+.|++||.++|
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl---~g-----------------------~~~~L~~Gds~~i 140 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV---CK-----------------------NKFLSVKGSTFQI 140 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE---TT-----------------------EEEEEETTCEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE---CC-----------------------EEEEEcCCCEEEE
Confidence 56677899999 77666665 568999999999999987 21 2579999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEE
Q 048197 158 PTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~ 178 (480)
|+|.+|.+.|.+++++.++.+
T Consensus 141 P~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 141 PAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp CTTCEEEEEECSSSCEEEEEE
T ss_pred CCCCCEEEEECCCCCEEEEEE
Confidence 999999999999999888765
No 124
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.42 E-value=7.2e-07 Score=85.48 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=62.7
Q ss_pred cccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 77 QCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 77 ~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
.+..+.+..+++.||+...+|+|...+++||++|++.+.+ +. +...+++||.++
T Consensus 149 ~~~~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~g-----------------------~~~~l~~Gd~i~ 202 (227)
T 3rns_A 149 AKPNLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV---DG-----------------------KPFIVKKGESAV 202 (227)
T ss_dssp EETTEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE---TT-----------------------EEEEEETTEEEE
T ss_pred ECCCeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE---CC-----------------------EEEEECCCCEEE
Confidence 3456888899999999988999999999999999999986 21 247999999999
Q ss_pred eCCCCEEEEEc-CCCCcEEEEE
Q 048197 157 LPTGSANWIYN-DGPSELVVVA 177 (480)
Q Consensus 157 iPaG~~h~~~N-~G~~~l~~v~ 177 (480)
+|+|++|+++| .++..+.++.
T Consensus 203 ip~~~~H~~~~~~~~~~~ll~~ 224 (227)
T 3rns_A 203 LPANIPHAVEAETENFKMLLIL 224 (227)
T ss_dssp ECTTSCEEEECCSSCEEEEEEE
T ss_pred ECCCCcEEEEeCCCCEEEEEEE
Confidence 99999999999 6665555443
No 125
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.40 E-value=1.1e-06 Score=73.14 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=59.6
Q ss_pred ceeEEeeeeccccccccccccCCceE-EEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSV-VYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei-~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
++.+.++.+.||+-..+|||+...++ .||++|++.+.+- +|+ .+ .|++||+++||+|.+|...+.. +..++.+
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~--~~~-~~--~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~~ 105 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGD--GDA-VI--PAPRGAVLVAPISTPHGVRAVT-DMKVLVT 105 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECG--GGC-EE--EECTTEEEEEETTSCEEEEESS-SEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeC--CCE-EE--EECCCCEEEeCCCCcEEEEEcC-CcEEEEE
Confidence 57888899999999999999876788 8999999998762 133 33 6999999999999999976643 3566655
Q ss_pred Ee
Q 048197 424 KT 425 (480)
Q Consensus 424 ~t 425 (480)
++
T Consensus 106 ~~ 107 (110)
T 2q30_A 106 IA 107 (110)
T ss_dssp EE
T ss_pred EC
Confidence 43
No 126
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.38 E-value=1.8e-06 Score=78.63 Aligned_cols=92 Identities=10% Similarity=0.127 Sum_probs=68.0
Q ss_pred CcccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEE--eeEEEEEEecCCceEEeeecCCc
Q 048197 321 DAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITR--GNGRMQIVAENGENVFDGQIREG 398 (480)
Q Consensus 321 ~~~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~--G~grv~vv~~~G~~~f~~~l~~G 398 (480)
+.....+|+.+.+-..+ ....+++..+.+ ++-..+|||....|+.||++ |++.+.+ +|+ .+ .|++|
T Consensus 26 ~~~~~~~G~srR~l~~~----~~fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dge-~~--~l~~G 93 (157)
T 4h7l_A 26 EAVACPCGWAQRAFGHD----AGTSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL---NGQ-SY--PLTKL 93 (157)
T ss_dssp CCEEETTEEEEEESCGG----GCCSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE---TTE-EE--ECCTT
T ss_pred CCccCCCCeeeEEeEcC----CCCcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE---CCE-EE--EeCCC
Confidence 33556688877754332 122244444444 45568999999999999999 9999988 344 33 69999
Q ss_pred cEEEECCCcEEEEEcCCCCeEEEEEEecC
Q 048197 399 QLIVVPQGFAVVKRASNRGLEWISFKTND 427 (480)
Q Consensus 399 dV~vVPqg~~~~~~ag~e~l~~v~f~ts~ 427 (480)
|+++||+|..|...+ .++++++.+..
T Consensus 94 D~v~IPpg~~H~i~g---~l~~L~I~~Pp 119 (157)
T 4h7l_A 94 LAISIPPLVRHRIVG---EATIINIVSPP 119 (157)
T ss_dssp EEEEECTTCCEEEES---CEEEEEEEESS
T ss_pred CEEEECCCCeEeeEC---CEEEEEEECCC
Confidence 999999999999863 69999988654
No 127
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.32 E-value=1.9e-06 Score=76.21 Aligned_cols=71 Identities=14% Similarity=0.278 Sum_probs=58.7
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
.|++..+.+.|| ..|||....|++||++|++.+++ +|+. + .|++||+++||.|.+|...+ .+.++++.+.
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~---~g~~-~--~l~~GD~i~~p~g~~h~~~~-~~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH---EGET-M--IAKAGDVMFIPKGSSIEFGT-PTSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE---TTEE-E--EEETTCEEEECTTCEEEEEE-EEEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE---CCEE-E--EECCCcEEEECCCCEEEEEe-CCCEEEEEEE
Confidence 588999999999 57899889999999999999887 2443 3 69999999999999988764 4567777665
Q ss_pred e
Q 048197 425 T 425 (480)
Q Consensus 425 t 425 (480)
+
T Consensus 126 ~ 126 (133)
T 2pyt_A 126 W 126 (133)
T ss_dssp E
T ss_pred c
Confidence 4
No 128
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.31 E-value=1.9e-06 Score=76.21 Aligned_cols=72 Identities=15% Similarity=0.066 Sum_probs=56.8
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
.+.+..++++||. .+.+++..|++||++|++.+.+ +. +...|++||+++||+
T Consensus 56 ~~~~~~~~~~pG~--~~~h~~~~E~~~VLeG~~~l~~---~g-----------------------~~~~l~~GD~i~~p~ 107 (133)
T 2pyt_A 56 SMAAGFMQWDNAF--FPWTLNYDEIDMVLEGELHVRH---EG-----------------------ETMIAKAGDVMFIPK 107 (133)
T ss_dssp SSEEEEEEEEEEE--EEEECSSEEEEEEEEEEEEEEE---TT-----------------------EEEEEETTCEEEECT
T ss_pred cEEEEEEEECCCC--ccccCCCCEEEEEEECEEEEEE---CC-----------------------EEEEECCCcEEEECC
Confidence 5778889999993 2333468999999999999986 21 246999999999999
Q ss_pred CCEEEEEcCCCCcEEEEEEeeC
Q 048197 160 GSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~~d~ 181 (480)
|..|.+.|+ +++.+++++..
T Consensus 108 g~~h~~~~~--~~~~~l~v~~p 127 (133)
T 2pyt_A 108 GSSIEFGTP--TSVRFLYVAWP 127 (133)
T ss_dssp TCEEEEEEE--EEEEEEEEEES
T ss_pred CCEEEEEeC--CCEEEEEEEcC
Confidence 999999874 56777776643
No 129
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.31 E-value=3.1e-06 Score=71.49 Aligned_cols=72 Identities=6% Similarity=0.133 Sum_probs=57.6
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
++.+..+.+.||.-..+|||+ ..|++||++|++.+.+ +++ .+ .|++||+++||+|.+|...+. +++.++.+.
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i---~~~-~~--~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~ 108 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITF---DDQ-KI--DLVPEDVLMVPAHKIHAIAGK-GRFKMLQIT 108 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEE---TTE-EE--EECTTCEEEECTTCCBEEEEE-EEEEEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEE---CCE-EE--EecCCCEEEECCCCcEEEEeC-CCcEEEEEE
Confidence 356777788999999999996 5799999999999877 233 34 699999999999999987664 456666543
No 130
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.30 E-value=8.1e-07 Score=74.58 Aligned_cols=77 Identities=18% Similarity=0.188 Sum_probs=59.4
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~f 423 (480)
.+.+.+++|.||+-..-|.|+....++|+++|+++ +...+|.. -...|++||++++|+|..|...| +++++.|+++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~--~~~~dG~~-~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMT--IVAPDGTR-SLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-C--EECTTSCE-ECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEE--EEeCCCcE-EEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 68899999999999988888766555555565555 55566762 12379999999999999998755 7889999986
Q ss_pred E
Q 048197 424 K 424 (480)
Q Consensus 424 ~ 424 (480)
.
T Consensus 93 E 93 (98)
T 2ozi_A 93 E 93 (98)
T ss_dssp E
T ss_pred E
Confidence 5
No 131
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.30 E-value=4.4e-06 Score=79.73 Aligned_cols=92 Identities=13% Similarity=0.030 Sum_probs=74.6
Q ss_pred cCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccc
Q 048197 61 SEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQ 140 (480)
Q Consensus 61 se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~ 140 (480)
-..|..+..-++.+ +.+..+.+..+.|.||+....|.|..+|++||++|.+.+.+- ..+
T Consensus 113 ~~~a~~elvGP~g~-~~s~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~---~g~----------------- 171 (217)
T 4b29_A 113 NRFGWFELAGPSGH-FLTQSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLR---NAP----------------- 171 (217)
T ss_dssp HHEEEEEEEETTSS-EECSSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEET---TSC-----------------
T ss_pred hCceEEEEECCCCC-CCCCeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEEC---CCC-----------------
Confidence 34556666666543 566789999999999999877888899999999999998872 112
Q ss_pred cccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEe
Q 048197 141 DQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 141 d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
...+++||++++|+|++|++- ++++|+.++.+.
T Consensus 172 -----~~~l~pGd~v~ipsgv~Ha~r-t~dePllalwvW 204 (217)
T 4b29_A 172 -----DLMLEPGQTRFHPANAPHAMT-TLTDPILTLVLW 204 (217)
T ss_dssp -----CEEECTTCEEEECTTCCEEEE-CCSSCEEEEEEE
T ss_pred -----EEecCCCCEEEcCCCCceeEE-ECCccEEEEEEE
Confidence 469999999999999999997 589999877665
No 132
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.29 E-value=9.7e-06 Score=73.44 Aligned_cols=73 Identities=14% Similarity=0.053 Sum_probs=57.0
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
.+++..++++ ++ ..|++++..|++||++|++.+.+ +. + ...+++||+++||+
T Consensus 65 ~~s~g~~~~e-~~-~~~~~~~~eE~~yVLeG~~~l~i---~g-~----------------------~~~l~~GD~i~iP~ 116 (151)
T 4axo_A 65 RLGCGMMEMK-ET-TFDWTLNYDEIDYVIDGTLDIII---DG-R----------------------KVSASSGELIFIPK 116 (151)
T ss_dssp SCEEEEEEEE-EE-EEEEECSSEEEEEEEEEEEEEEE---TT-E----------------------EEEEETTCEEEECT
T ss_pred cEEEEEEEEc-Cc-cccEeCCCcEEEEEEEeEEEEEE---CC-E----------------------EEEEcCCCEEEECC
Confidence 5777788887 33 34444578899999999999985 22 2 47999999999999
Q ss_pred CCEEEEEcCCCCcEEEEEEeeCC
Q 048197 160 GSANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
|..|.+.|. +++.++++....
T Consensus 117 G~~h~~~n~--~~a~~l~V~~P~ 137 (151)
T 4axo_A 117 GSKIQFSVP--DYARFIYVTYPA 137 (151)
T ss_dssp TCEEEEEEE--EEEEEEEEEECS
T ss_pred CCEEEEEeC--CCEEEEEEECCC
Confidence 999999997 677777776443
No 133
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.28 E-value=8e-07 Score=74.39 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=51.0
Q ss_pred EEEEEEcCCeeecCcccCC-CeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCC
Q 048197 83 VFRHRIQQRGLVVPSYTNT-PELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGS 161 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a-~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~ 161 (480)
..++.+.||.. .+|||.. .|++||++|++.+.+- +. +...+++||+++||+|.
T Consensus 30 ~~~~~~~~g~~-~~H~H~~~~E~~~Vl~G~~~~~~~--~~-----------------------~~~~l~~Gd~~~ip~~~ 83 (107)
T 2i45_A 30 QFHLVKLLGDY-GWHTHGYSDKVLFAVEGDMAVDFA--DG-----------------------GSMTIREGEMAVVPKSV 83 (107)
T ss_dssp EEEEEEEEEEC-CCBCC--CCEEEEESSSCEEEEET--TS-----------------------CEEEECTTEEEEECTTC
T ss_pred EEEEEECCCCC-cceeCCCCCEEEEEEeCEEEEEEC--CC-----------------------cEEEECCCCEEEECCCC
Confidence 45567778874 4899986 9999999999998762 20 14799999999999999
Q ss_pred EEEEEcCCCCcEEEEE
Q 048197 162 ANWIYNDGPSELVVVA 177 (480)
Q Consensus 162 ~h~~~N~G~~~l~~v~ 177 (480)
+|++.|.+ ++.++.
T Consensus 84 ~H~~~~~~--~~~~l~ 97 (107)
T 2i45_A 84 SHRPRSEN--GCSLVL 97 (107)
T ss_dssp CEEEEEEE--EEEEEE
T ss_pred cEeeEeCC--CeEEEE
Confidence 99999963 455543
No 134
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.28 E-value=1.7e-06 Score=72.40 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=53.1
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEe
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKT 425 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~t 425 (480)
..++.+.||.. .+|||+...|+.||++|++.+.+-+ |. .+ .|++||+++||+|.+|...+. +++.++.|..
T Consensus 30 ~~~~~~~~g~~-~~H~H~~~~E~~~Vl~G~~~~~~~~--~~-~~--~l~~Gd~~~ip~~~~H~~~~~-~~~~~l~i~~ 100 (107)
T 2i45_A 30 QFHLVKLLGDY-GWHTHGYSDKVLFAVEGDMAVDFAD--GG-SM--TIREGEMAVVPKSVSHRPRSE-NGCSLVLIEL 100 (107)
T ss_dssp EEEEEEEEEEC-CCBCC--CCEEEEESSSCEEEEETT--SC-EE--EECTTEEEEECTTCCEEEEEE-EEEEEEEEEC
T ss_pred EEEEEECCCCC-cceeCCCCCEEEEEEeCEEEEEECC--Cc-EE--EECCCCEEEECCCCcEeeEeC-CCeEEEEEEC
Confidence 34456678874 5999988899999999999987633 13 33 699999999999999988663 4577776653
No 135
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.27 E-value=2.4e-06 Score=70.01 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=45.1
Q ss_pred eeecCcccCC-CeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCC
Q 048197 92 GLVVPSYTNT-PELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGP 170 (480)
Q Consensus 92 gl~lPh~~~a-~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~ 170 (480)
+-..+|||+. .+++||++|++.+.+ .+ +...+++||+++||+|.+|.+.|.++
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~--~~------------------------~~~~l~~Gd~~~ip~~~~H~~~~~~~ 93 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAF--RD------------------------QNITLQAGEMYVIPKGVEHKPMAKEE 93 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEEC--SS------------------------CEEEEETTEEEEECTTCCBEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEE--CC------------------------EEEEEcCCCEEEECCCCeEeeEcCCC
Confidence 4577899986 999999999998875 22 14799999999999999999999854
Q ss_pred C
Q 048197 171 S 171 (480)
Q Consensus 171 ~ 171 (480)
.
T Consensus 94 ~ 94 (102)
T 3d82_A 94 C 94 (102)
T ss_dssp E
T ss_pred C
Confidence 3
No 136
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.26 E-value=2.8e-06 Score=69.63 Aligned_cols=61 Identities=13% Similarity=0.253 Sum_probs=48.4
Q ss_pred cccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 357 AMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 357 am~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+...+|||+.+.|+.||++|++.+.+- ++ .+ .+++||+++||+|.+|...+. ++..++.+.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~---~~-~~--~l~~Gd~~~ip~~~~H~~~~~-~~~~~l~i~ 100 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFR---DQ-NI--TLQAGEMYVIPKGVEHKPMAK-EECKIMIIE 100 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECS---SC-EE--EEETTEEEEECTTCCBEEEEE-EEEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEEC---CE-EE--EEcCCCEEEECCCCeEeeEcC-CCCEEEEEE
Confidence 457899999889999999999988763 33 23 699999999999999987664 356666554
No 137
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.26 E-value=3.2e-06 Score=78.16 Aligned_cols=77 Identities=8% Similarity=0.034 Sum_probs=60.7
Q ss_pred ccceeEEeeeecccccccccccc-CCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEE
Q 048197 343 YIQLSAEKGNLYQNAMMAPHWNL-NAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEW 420 (480)
Q Consensus 343 ~l~lsa~~v~L~pgam~~PHwh~-nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~ 420 (480)
...+.+..+++.||+...+|||. ...|++||++|++.+.+ +|+ .+ .|++||+++||.+.+|...+ +++++ +
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~---~~~-~~--~l~~GD~i~i~~~~~H~~~n~~~~~~-~ 173 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF---DEQ-WH--ELQQGEHIRFFSDQPHGYAAVTEKAV-F 173 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE---TTE-EE--EECTTCEEEEECSSSEEEEESSSCEE-E
T ss_pred CCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE---CCE-EE--EeCCCCEEEEcCCCCeEeECCCCCcE-E
Confidence 34688999999999998854443 35799999999999877 233 34 69999999999999998765 67778 7
Q ss_pred EEEEec
Q 048197 421 ISFKTN 426 (480)
Q Consensus 421 v~f~ts 426 (480)
+.+...
T Consensus 174 l~v~~~ 179 (192)
T 1y9q_A 174 QNIVAY 179 (192)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776643
No 138
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.20 E-value=6.6e-06 Score=75.67 Aligned_cols=73 Identities=10% Similarity=0.020 Sum_probs=61.0
Q ss_pred ceeEEeeeecc-ccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 345 QLSAEKGNLYQ-NAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 345 ~lsa~~v~L~p-gam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
-+.+..+.|.| |+...||.|..+.+++||++|+..+++= | ..+ .|.+||.++||++.+|.+.| +++.+.++.
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~---g-~~~--~L~~Gds~~iP~g~~H~~~N~~d~~Arll~ 160 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC---K-NKF--LSVKGSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET---T-EEE--EEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC---C-EEE--EEcCCCEEEECCCCCEEEEECCCCCEEEEE
Confidence 36677899999 9999999888999999999999999982 2 345 69999999999999998755 677777664
Q ss_pred E
Q 048197 423 F 423 (480)
Q Consensus 423 f 423 (480)
.
T Consensus 161 V 161 (166)
T 2vpv_A 161 V 161 (166)
T ss_dssp E
T ss_pred E
Confidence 3
No 139
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.19 E-value=7.2e-06 Score=77.04 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=59.6
Q ss_pred eEEEEEEcCCe----------eecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecC
Q 048197 82 AVFRHRIQQRG----------LVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIRE 151 (480)
Q Consensus 82 s~~r~~i~p~g----------l~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~ 151 (480)
+...+++.|+. .+..|+|+..|++||++|+|.+.+-..+ .+.| ...+++
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~-d~~~--------------------~i~v~~ 133 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKE-DKWI--------------------RISMEK 133 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTT-SCEE--------------------EEEEET
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCcceEEEEEeceEEEEECCCC-CeEE--------------------EEEECC
Confidence 34556677764 3466888889999999999999985321 1111 258999
Q ss_pred CcEEEeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 152 GDLVALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 152 GDV~~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
||+|+||+|+.||+.+..+..+.++.++.
T Consensus 134 GDlIiIPaG~~H~f~~~~~~~~~airlF~ 162 (191)
T 1vr3_A 134 GDMITLPAGIYHRFTLDEKNYVKAMRLFV 162 (191)
T ss_dssp TEEEEECTTCCEEEEECTTCCEEEEEEES
T ss_pred CCEEEECcCCcCCcccCCCCCEEEEEEEC
Confidence 99999999999999998777888887764
No 140
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.17 E-value=6.9e-06 Score=83.85 Aligned_cols=81 Identities=12% Similarity=0.098 Sum_probs=62.7
Q ss_pred ceeEEeeeeccccccc---cccccCCceEEEEEEeeEEEEEEecCCc-eEEeeecCCccEEEECCCcEEEEEc-CCCCeE
Q 048197 345 QLSAEKGNLYQNAMMA---PHWNLNAHSVVYITRGNGRMQIVAENGE-NVFDGQIREGQLIVVPQGFAVVKRA-SNRGLE 419 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~---PHwh~nA~ei~yV~~G~grv~vv~~~G~-~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~ 419 (480)
.+++. ..+.|++-.. ||||++..|++||++|++++.+-+.+|. ..+ .|++||+++||.|.+|...| +++. +
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~--~L~~GD~v~ip~g~~H~~~n~~~~~-~ 122 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTR--VLSSGDYGSVPRNVTHTFQIQDPDT-E 122 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEE--EEETTCEEEECTTEEEEEEECSTTE-E
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEE--EECCCCEEEECCCCcEEEEeCCCCC-E
Confidence 35666 5666766655 8999999999999999999998875554 344 79999999999999999866 4554 8
Q ss_pred EEEEEecCCC
Q 048197 420 WISFKTNDVA 429 (480)
Q Consensus 420 ~v~f~ts~~~ 429 (480)
++.+.+....
T Consensus 123 ~l~v~~p~~~ 132 (350)
T 1juh_A 123 MTGVIVPGGF 132 (350)
T ss_dssp EEEEEESSCT
T ss_pred EEEEEcCccH
Confidence 7777665443
No 141
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.17 E-value=6.4e-06 Score=74.61 Aligned_cols=73 Identities=19% Similarity=0.352 Sum_probs=58.7
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
.+++..+.+. ++ ..|||..-+|+.||++|++.+++ +|+. + .|++||+++||+|..|...+. +.++++.+.
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i---~g~~-~--~l~~GD~i~iP~G~~h~~~n~-~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIII---DGRK-V--SASSGELIFIPKGSKIQFSVP-DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEE---TTEE-E--EEETTCEEEECTTCEEEEEEE-EEEEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEE---CCEE-E--EEcCCCEEEECCCCEEEEEeC-CCEEEEEEE
Confidence 4788888887 33 35799999999999999999996 4543 3 699999999999999887664 678888876
Q ss_pred ecC
Q 048197 425 TND 427 (480)
Q Consensus 425 ts~ 427 (480)
+.+
T Consensus 135 ~P~ 137 (151)
T 4axo_A 135 YPA 137 (151)
T ss_dssp ECS
T ss_pred CCC
Confidence 644
No 142
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.15 E-value=1.2e-05 Score=75.60 Aligned_cols=68 Identities=15% Similarity=0.326 Sum_probs=55.1
Q ss_pred ccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC-CCCeEEEEEEecC
Q 048197 358 MMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS-NRGLEWISFKTND 427 (480)
Q Consensus 358 m~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag-~e~l~~v~f~ts~ 427 (480)
.+.+|+|+. .|+.||++|+|.+.|-+.+++ .+.-.+++||+++||+|..|+..++ +..+..+.+++.+
T Consensus 96 ~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~-~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 96 FFEEHLHLD-EEIRYILEGSGYFDVRDKEDK-WIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp HHSCEECSS-CEEEEEEEEEEEEEEECTTSC-EEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred CCcceECCc-ceEEEEEeceEEEEECCCCCe-EEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 457899987 899999999999999986554 3334799999999999999998775 4557778777654
No 143
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.14 E-value=1.5e-05 Score=72.63 Aligned_cols=98 Identities=15% Similarity=0.192 Sum_probs=70.5
Q ss_pred ccccCCCCCCcceecCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccC-CCeEEEEEe--ceEEEEEEcCCCcc
Q 048197 47 IQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQ--GRGIHGAVFPGCPE 123 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~--G~g~~g~v~pg~~e 123 (480)
+-+|...+| .+-.+|.....-...+.+. +++..+.+. +-..+|||. ..|++||++ |++.+.+ +.
T Consensus 19 iv~~~ei~~---~~~~~G~srR~l~~~~~fp---~sv~~v~~g--~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dg-- 85 (157)
T 4h7l_A 19 MISLSEIEA---VACPCGWAQRAFGHDAGTS---VSVHYTQIT--KAARTHYHREHQEIYVVLDHAAHATIEL---NG-- 85 (157)
T ss_dssp EEETTTSCC---EEETTEEEEEESCGGGCCS---CEEEEEEEC--SCCCCBBCSSCEEEEEEEEECTTCEEEE---TT--
T ss_pred EEEhhhCCC---ccCCCCeeeEEeEcCCCCc---EEEEEEeCC--CCccceECCCCcEEEEEEecCcEEEEEE---CC--
Confidence 335555555 5677888877554433332 455545554 445789985 679999999 9999987 21
Q ss_pred chhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCC
Q 048197 124 TYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 124 tf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
+.+.|++||+++||+|+.|++.+ ++.+++++...
T Consensus 86 ---------------------e~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I~~Pp 119 (157)
T 4h7l_A 86 ---------------------QSYPLTKLLAISIPPLVRHRIVG----EATIINIVSPP 119 (157)
T ss_dssp ---------------------EEEECCTTEEEEECTTCCEEEES----CEEEEEEEESS
T ss_pred ---------------------EEEEeCCCCEEEECCCCeEeeEC----CEEEEEEECCC
Confidence 25799999999999999999984 68888876543
No 144
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.11 E-value=1.4e-06 Score=81.03 Aligned_cols=65 Identities=17% Similarity=0.373 Sum_probs=51.2
Q ss_pred ecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcE
Q 048197 94 VVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSEL 173 (480)
Q Consensus 94 ~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l 173 (480)
+.+|+|+..|+.||++|+|.+.+. .+. +.| ...+++||+|+||+|+.||+.+..+..+
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d-~~~--------------------~~~l~~GDli~IP~g~~H~~~~~~~~~~ 150 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLH-IGD-EVF--------------------QVLCEKNDLISVPAHTPHWFDMGSEPNF 150 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEE-CSS-CEE--------------------EEECCCSCEEEECTTCCBCCCCSSCSSC
T ss_pred ccceECChheEEEEEcceEEEEEE-eCC-EEE--------------------EEEECCCCEEEECCCCeEeeecCCCceE
Confidence 567889889999999999999875 221 111 2469999999999999999988766677
Q ss_pred EEEEEee
Q 048197 174 VVVALVD 180 (480)
Q Consensus 174 ~~v~~~d 180 (480)
.++-++.
T Consensus 151 ~~ir~F~ 157 (179)
T 1zrr_A 151 TAIRIFD 157 (179)
T ss_dssp EEEEEEC
T ss_pred EEEEecc
Confidence 7776663
No 145
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.06 E-value=7.8e-06 Score=68.89 Aligned_cols=68 Identities=18% Similarity=0.082 Sum_probs=52.0
Q ss_pred eeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCC
Q 048197 81 VAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTG 160 (480)
Q Consensus 81 vs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG 160 (480)
..+....+.|+... .| ++..|++||++|++.+.+ .+. + ...|++||+++||+|
T Consensus 31 ~~~~~~~~~pg~~~-~h-H~~~E~~~Vl~G~~~~~i--~~g-~----------------------~~~l~~GD~i~ip~g 83 (101)
T 1o5u_A 31 EKWPIWEKEVSEFD-WY-YDTNETCYILEGKVEVTT--EDG-K----------------------KYVIEKGDLVTFPKG 83 (101)
T ss_dssp GGSCEEEECSEEEE-EE-CSSCEEEEEEEEEEEEEE--TTC-C----------------------EEEEETTCEEEECTT
T ss_pred eEEEEEEeCCCccc-cc-CCceEEEEEEeCEEEEEE--CCC-C----------------------EEEECCCCEEEECCC
Confidence 34446788888753 23 678999999999999976 212 1 479999999999999
Q ss_pred CEEEEEcCCCCcEEE
Q 048197 161 SANWIYNDGPSELVV 175 (480)
Q Consensus 161 ~~h~~~N~G~~~l~~ 175 (480)
.+|.+.|.++.+..+
T Consensus 84 ~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 84 LRCRWKVLEPVRKHY 98 (101)
T ss_dssp CEEEEEEEEEEEEEE
T ss_pred CcEEEEeCCCeeEEE
Confidence 999999976654443
No 146
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.02 E-value=1e-05 Score=74.87 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=66.4
Q ss_pred cceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCCeEEEE
Q 048197 344 IQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWIS 422 (480)
Q Consensus 344 l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~v~ 422 (480)
.|..+.+++|.||+-..+|.|. ..|++||++|++.+.+-+ |+. + .|++||.+ ||++.+|...| +++.++++.
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~--ge~-~--~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~ 149 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD--GAK-R--TVRQGGII-VQRGTNHLWRNTTDKPCRIAF 149 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG--GCE-E--EECTTCEE-EECSCCBEEECCSSSCEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC--CeE-E--EECCCCEE-EeCCCcEEEEeCCCCCEEEEE
Confidence 3788999999999999999985 568899999999987632 333 3 69999999 99999998765 688999999
Q ss_pred EEecCCCc
Q 048197 423 FKTNDVAK 430 (480)
Q Consensus 423 f~ts~~~~ 430 (480)
+.+...+.
T Consensus 150 V~~P~~p~ 157 (172)
T 3es1_A 150 ILIEAPAY 157 (172)
T ss_dssp EEEECCCC
T ss_pred EEcCCCce
Confidence 88777664
No 147
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.02 E-value=2.5e-05 Score=80.36 Aligned_cols=85 Identities=13% Similarity=0.240 Sum_probs=69.7
Q ss_pred EEEeCCCC--hhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhccccccccccccc
Q 048197 66 TEFWDQND--EQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQH 143 (480)
Q Consensus 66 ~e~~~~~~--~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~ 143 (480)
+++.++.+ +.+. -+.+....|.||.-..||-|.+.+++||++|+|.+.+ |. +
T Consensus 264 ~~y~NP~tg~~~~p--ti~~~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I---~~-~-------------------- 317 (368)
T 3nw4_A 264 IRYVNPTTGGDVMP--TLRCEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVM---NG-E-------------------- 317 (368)
T ss_dssp EECBCTTTSSBSSS--SCEEEEEEECTTCBCCCEEESSCEEEEEEESCEEEEE---TT-E--------------------
T ss_pred EEEeCCCCCCCcch--hHHhheEEECCCCccCCeeccccEEEEEEeCcEEEEE---CC-E--------------------
Confidence 46667654 3444 5677778999999999999999999999999999987 21 2
Q ss_pred ceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 144 QKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 144 qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
..++++||+|+||++..|.+.|+ +++.++++-|
T Consensus 318 --~~~w~~gD~fvvP~w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 318 --TTKLEKGDMFVVPSWVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp --EEEECTTCEEEECTTCCEEEEES--SSEEEEEEES
T ss_pred --EEEecCCCEEEECCCCcEEEEeC--CCEEEEEEeC
Confidence 46999999999999999999997 5788887765
No 148
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=97.97 E-value=1.2e-05 Score=70.21 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=54.6
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
..+.+....+.||.... |++...|++||++|++.+.+ .++ + ...|++||+++||
T Consensus 47 g~~~~g~w~~~pG~~~~-~~~~~~E~~~Vl~G~~~l~~--~~g-~----------------------~~~l~~GD~~~ip 100 (123)
T 3bcw_A 47 GKVESGVWESTSGSFQS-NTTGYIEYCHIIEGEARLVD--PDG-T----------------------VHAVKAGDAFIMP 100 (123)
T ss_dssp TTEEEEEEEEEEEEEEC-CCTTEEEEEEEEEEEEEEEC--TTC-C----------------------EEEEETTCEEEEC
T ss_pred CCEEEEEEEECCCceee-EcCCCcEEEEEEEEEEEEEE--CCC-e----------------------EEEECCCCEEEEC
Confidence 35777888999988764 44444899999999999875 232 1 4699999999999
Q ss_pred CCCEEEEEcCCCCcEE
Q 048197 159 TGSANWIYNDGPSELV 174 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~ 174 (480)
+|..|.+.|.++..-+
T Consensus 101 ~g~~h~~~~~~~~rK~ 116 (123)
T 3bcw_A 101 EGYTGRWEVDRHVKKI 116 (123)
T ss_dssp TTCCCEEEEEEEEEEE
T ss_pred CCCeEEEEECCceeEE
Confidence 9999999998664433
No 149
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=97.94 E-value=5e-05 Score=64.62 Aligned_cols=75 Identities=13% Similarity=0.193 Sum_probs=53.7
Q ss_pred ceeEEeeeeccccccccc--cccCCceEEEEEEeeEEEEEEecCCce-EEeeecCCccEEEECCCcEEEEEc-CCC-CeE
Q 048197 345 QLSAEKGNLYQNAMMAPH--WNLNAHSVVYITRGNGRMQIVAENGEN-VFDGQIREGQLIVVPQGFAVVKRA-SNR-GLE 419 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PH--wh~nA~ei~yV~~G~grv~vv~~~G~~-~f~~~l~~GdV~vVPqg~~~~~~a-g~e-~l~ 419 (480)
++.+.++. .+|....++ +|....|+.||++|++.+.+=+ .. .+ .|++||.++||+|.+|...+ +++ .+.
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~---~~~~~--~l~~Gd~i~ipa~~~H~~~n~~~~~~~~ 103 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEG---DTAPR--VMRPGDWLHVPAHCRHRVAWTDGGEPTV 103 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETT---CSSCE--EECTTEEEEECTTCCEEEEEECSSSCEE
T ss_pred CEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEECC---EEEEE--EECCCCEEEECCCCcEEEEeCCCCCCEE
Confidence 45555554 344445553 5667889999999999998733 22 03 69999999999999998765 543 677
Q ss_pred EEEEEe
Q 048197 420 WISFKT 425 (480)
Q Consensus 420 ~v~f~t 425 (480)
|++++.
T Consensus 104 ~l~v~~ 109 (112)
T 2opk_A 104 WLAVHC 109 (112)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887764
No 150
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.92 E-value=0.00082 Score=64.44 Aligned_cols=66 Identities=20% Similarity=0.277 Sum_probs=52.7
Q ss_pred eEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEe
Q 048197 347 SAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKT 425 (480)
Q Consensus 347 sa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~t 425 (480)
.+..+++.||+.+.+|.| ...|+ ||++|+.. +.. ..+.+|+-+-.|.|..|...++.+++. |-++|
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~~------~~~~~GsWlR~P~gs~h~~~ag~~g~~-i~~k~ 212 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VND------EVLGRNAWLRLPEGEALSATAGARGAK-IWMKT 212 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ETT------EEECTTEEEEECTTCCEEEEEEEEEEE-EEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----ECC------ceECCCeEEEeCCCCccCcEECCCCeE-EEEEe
Confidence 456788899999999999 88887 99999954 332 358899999999999999888766655 44454
No 151
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.86 E-value=4.3e-05 Score=77.09 Aligned_cols=78 Identities=12% Similarity=0.276 Sum_probs=64.0
Q ss_pred eEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCC-c---cEEEECCCcEEEEEc-CCCCeEEE
Q 048197 347 SAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIRE-G---QLIVVPQGFAVVKRA-SNRGLEWI 421 (480)
Q Consensus 347 sa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~-G---dV~vVPqg~~~~~~a-g~e~l~~v 421 (480)
-.....++||.++.-|||.+..|+.||++|++++.+-++.....+ .+.. | ++++||.|+.|.+.+ |+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEII--EYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCE--EEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEE--EEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 345567899999999999999999999999999999877554444 3444 6 999999999999876 66889888
Q ss_pred EEEec
Q 048197 422 SFKTN 426 (480)
Q Consensus 422 ~f~ts 426 (480)
..-+.
T Consensus 351 ~~~~~ 355 (369)
T 3st7_A 351 MWVNE 355 (369)
T ss_dssp EEESS
T ss_pred EecCc
Confidence 77543
No 152
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=97.86 E-value=9.7e-06 Score=75.44 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=53.2
Q ss_pred cccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCC-CCeEEEEEEecC
Q 048197 357 AMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASN-RGLEWISFKTND 427 (480)
Q Consensus 357 am~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~-e~l~~v~f~ts~ 427 (480)
+.+.+|+|+. .|+.||++|+|.+.|. .+++ .+.-.+++||+++||+|..|+..+++ ..+..+-++++.
T Consensus 91 ~~~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~-~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 91 KFLNEHTHGE-DEVRFFVEGAGLFCLH-IGDE-VFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP 159 (179)
T ss_dssp HHHSCBEESS-CEEEEEEESCCCCCEE-CSSC-EEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG
T ss_pred ccccceECCh-heEEEEEcceEEEEEE-eCCE-EEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC
Confidence 4467899987 8999999999999887 3343 44446999999999999999987754 457677777543
No 153
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=97.82 E-value=8.3e-05 Score=70.92 Aligned_cols=93 Identities=12% Similarity=0.091 Sum_probs=74.9
Q ss_pred ccCCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEE
Q 048197 323 YNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIV 402 (480)
Q Consensus 323 ~~~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~v 402 (480)
|..+.|....+-... |+.. -+|.+..+.|.||..+..|-|+ +.|+.||++|.+.+.+-+ |.. + .+.+||+++
T Consensus 111 f~~~~a~~elvGP~g-~~~s-~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~--g~~-~--~l~pGd~v~ 182 (217)
T 4b29_A 111 FLNRFGWFELAGPSG-HFLT-QSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN--APD-L--MLEPGQTRF 182 (217)
T ss_dssp HHHHEEEEEEEETTS-SEEC-SSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT--SCC-E--EECTTCEEE
T ss_pred HHhCceEEEEECCCC-CCCC-CeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC--CCE-E--ecCCCCEEE
Confidence 444678888887765 3333 3689999999999999999998 679999999999998852 332 3 599999999
Q ss_pred ECCCcEEEEEcCCCCeEEEEE
Q 048197 403 VPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 403 VPqg~~~~~~ag~e~l~~v~f 423 (480)
+|.|.+|.+.++++++..+..
T Consensus 183 ipsgv~Ha~rt~dePllalwv 203 (217)
T 4b29_A 183 HPANAPHAMTTLTDPILTLVL 203 (217)
T ss_dssp ECTTCCEEEECCSSCEEEEEE
T ss_pred cCCCCceeEEECCccEEEEEE
Confidence 999999999999999864433
No 154
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.82 E-value=0.00011 Score=74.14 Aligned_cols=77 Identities=22% Similarity=0.269 Sum_probs=62.9
Q ss_pred EEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecC-C---cEEEe
Q 048197 83 VFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIRE-G---DLVAL 157 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~-G---DV~~i 157 (480)
....+++||...--|||+ ..+++||++|++.+.+=.+...+ ...+.. | |++.|
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~i 331 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE----------------------IIEYYVSGDKLEVVDI 331 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC----------------------CEEEEEETTBCCEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc----------------------EEEEEecCCcceEEEe
Confidence 445688999999999986 77999999999999875443222 456666 7 99999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeC
Q 048197 158 PTGSANWIYNDGPSELVVVALVDV 181 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~ 181 (480)
|+|..|-++|.|+++++++.+.+.
T Consensus 332 p~g~~h~~~n~~~~~~~~~~~~~~ 355 (369)
T 3st7_A 332 PVGYTHNIENLGDTDMVTIMWVNE 355 (369)
T ss_dssp CTTEEEEEEECSSSCEEEEEEESS
T ss_pred CCCceEEeEEcCCCcEEEEEecCc
Confidence 999999999999999999887643
No 155
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.74 E-value=8.2e-05 Score=67.78 Aligned_cols=73 Identities=10% Similarity=0.024 Sum_probs=61.1
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
|..+..++++||+.+.+|.|...+.+||++|+..+. +. -..+++||.+..|+
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~----e~------------------------~~~~~~Gd~~~~P~ 92 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK----EH------------------------DWVAHAGSVVYETA 92 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEET----TS------------------------SCCBCTTCEEEECS
T ss_pred CeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEe----CC------------------------CeEECCCeEEEECC
Confidence 677888999999999999999999999999997641 10 13789999999999
Q ss_pred CCEEEEEcC--CCCcEEEEEEee
Q 048197 160 GSANWIYND--GPSELVVVALVD 180 (480)
Q Consensus 160 G~~h~~~N~--G~~~l~~v~~~d 180 (480)
|..|...+. ++++++++.+.+
T Consensus 93 g~~H~~~~~~~~~e~~~~~~~~~ 115 (159)
T 3ebr_A 93 STRHTPQSAYAEGPDIITFNIVA 115 (159)
T ss_dssp SEEECEEESSSSSSCEEEEEEEE
T ss_pred CCcceeEeCCCCCCCEEEEEEec
Confidence 999999998 778887776543
No 156
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.69 E-value=3.9e-05 Score=68.57 Aligned_cols=76 Identities=9% Similarity=-0.045 Sum_probs=56.6
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEe
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKT 425 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~t 425 (480)
-.+.++++.||+...+|+|+.. +.+||++|+... ..|....+..+++||.+++|.|..|.-....+++.++.+++
T Consensus 44 ~~~~~~~~~pG~~~p~H~H~~~-ee~~VL~G~~~~----~~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~~~~ 118 (145)
T 2o1q_A 44 SWTAIFDCPAGSSFAAHVHVGP-GEYFLTKGKMDV----RGGKAAGGDTAIAPGYGYESANARHDKTEFPVASEFYMSFL 118 (145)
T ss_dssp EEEEEEEECTTEEECCEEESSC-EEEEEEEEEEEE----TTCGGGTSEEEESSEEEEECTTCEESCCEEEEEEEEEEEEE
T ss_pred cEEEEEEECCCCCCCccCCCCC-EEEEEEEeEEEE----cCCCEecceEeCCCEEEEECcCCccCCeECCCCeEEEEEEC
Confidence 3577899999999999999865 558999999984 33433212368999999999999998433345566666654
Q ss_pred c
Q 048197 426 N 426 (480)
Q Consensus 426 s 426 (480)
.
T Consensus 119 g 119 (145)
T 2o1q_A 119 G 119 (145)
T ss_dssp S
T ss_pred C
Confidence 3
No 157
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=97.69 E-value=8.9e-05 Score=64.64 Aligned_cols=63 Identities=11% Similarity=0.197 Sum_probs=49.6
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS 414 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag 414 (480)
.+++....+.||.... |+|.. +|+.||++|++.+.+ .+|.. + +|++||+++||+|..|...+.
T Consensus 48 ~~~~g~w~~~pG~~~~-~~~~~-~E~~~Vl~G~~~l~~--~~g~~-~--~l~~GD~~~ip~g~~h~~~~~ 110 (123)
T 3bcw_A 48 KVESGVWESTSGSFQS-NTTGY-IEYCHIIEGEARLVD--PDGTV-H--AVKAGDAFIMPEGYTGRWEVD 110 (123)
T ss_dssp TEEEEEEEEEEEEEEC-CCTTE-EEEEEEEEEEEEEEC--TTCCE-E--EEETTCEEEECTTCCCEEEEE
T ss_pred CEEEEEEEECCCceee-EcCCC-cEEEEEEEEEEEEEE--CCCeE-E--EECCCCEEEECCCCeEEEEEC
Confidence 4788888999998652 55422 899999999999886 34554 3 699999999999999877554
No 158
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.63 E-value=0.00013 Score=68.43 Aligned_cols=71 Identities=17% Similarity=0.055 Sum_probs=60.0
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
+..+..+.++||+.+.+|.|...|++||++|.-. + + ...+.+||.+.+|+
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~------d--e----------------------~~~~~~Gd~~~~p~ 173 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR------D--E----------------------TDRFGAGDIEIADQ 173 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE------C--S----------------------SSEEETTCEEEECS
T ss_pred CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE------C--C----------------------cEEECCCeEEEeCc
Confidence 4556788999999999999999999999999833 1 1 24899999999999
Q ss_pred CCEEEEEcCCCCcEEEEEEee
Q 048197 160 GSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 160 G~~h~~~N~G~~~l~~v~~~d 180 (480)
|+.|..++.+++.++++.++|
T Consensus 174 g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 174 ELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SCCCCCEECSSSCEEEEEEEC
T ss_pred CCccCCEeCCCCCEEEEEEec
Confidence 999999998778888887765
No 159
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=97.62 E-value=0.00012 Score=61.52 Aligned_cols=61 Identities=16% Similarity=0.333 Sum_probs=45.7
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS 414 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag 414 (480)
+.+....+.||.. +||-...|++||++|++.+.+- +|. .+ .|++||+++||+|.+|...+.
T Consensus 31 ~~~~~~~~~pg~~---~~hH~~~E~~~Vl~G~~~~~i~--~g~-~~--~l~~GD~i~ip~g~~H~~~n~ 91 (101)
T 1o5u_A 31 EKWPIWEKEVSEF---DWYYDTNETCYILEGKVEVTTE--DGK-KY--VIEKGDLVTFPKGLRCRWKVL 91 (101)
T ss_dssp GGSCEEEECSEEE---EEECSSCEEEEEEEEEEEEEET--TCC-EE--EEETTCEEEECTTCEEEEEEE
T ss_pred eEEEEEEeCCCcc---cccCCceEEEEEEeCEEEEEEC--CCC-EE--EECCCCEEEECCCCcEEEEeC
Confidence 3344566777764 3455688999999999999872 133 33 699999999999999987653
No 160
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.59 E-value=0.0002 Score=65.65 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=59.7
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
|..+..+.++||+.+.+|.|...+.+||++|+...+ +.+ ...+++||.+.+|+
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~----~~~-----------------------~~~~~aGd~~~~P~ 94 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT----EYP-----------------------GQKQTAGCYLYEPG 94 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET----TCT-----------------------TSCEETTEEEEECT
T ss_pred CcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC----CCc-----------------------eEEECCCeEEEeCC
Confidence 567888999999999999999999999999998763 111 14689999999999
Q ss_pred CCEEEEEcCC--CCcEEEEEEee
Q 048197 160 GSANWIYNDG--PSELVVVALVD 180 (480)
Q Consensus 160 G~~h~~~N~G--~~~l~~v~~~d 180 (480)
|..|...+.. +++++++.+.+
T Consensus 95 g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 95 GSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp TCEECEECCTTCSSCEEEEEEEE
T ss_pred CCceeeEeCCCCCCCcEEEEEEe
Confidence 9999999965 34776665544
No 161
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=97.57 E-value=0.00022 Score=62.95 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=47.4
Q ss_pred cCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCC-CcE
Q 048197 95 VPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGP-SEL 173 (480)
Q Consensus 95 lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~-~~l 173 (480)
.||.++.-+++||++|+|.+.+ +. +...+++||+++||+|.+|.+.+.++ ++.
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i---~~-----------------------~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~ 85 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKN---QG-----------------------REFVCRPGDILLFPPGEIHHYGRHPEAREW 85 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEE---TT-----------------------EEEEECTTCEEEECTTCCEEEEECTTSSEE
T ss_pred cccCCCceEEEEEEEeEEEEEE---CC-----------------------EEEEecCCeEEEEcCCCCEEEEeCCCCCcE
Confidence 4888899999999999999986 11 25799999999999999999988763 555
Q ss_pred EEEEE
Q 048197 174 VVVAL 178 (480)
Q Consensus 174 ~~v~~ 178 (480)
..+.+
T Consensus 86 ~~~~i 90 (164)
T 2arc_A 86 YHQWV 90 (164)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 162
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.54 E-value=0.0002 Score=65.87 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=47.9
Q ss_pred cCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcC
Q 048197 89 QQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYND 168 (480)
Q Consensus 89 ~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~ 168 (480)
.||+-.-=|+++.+|++||++|+..+.+...|.. |...|++||+|++|+|++|+-...
T Consensus 43 Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~----------------------~~v~l~eGE~f~lP~gvpH~P~r~ 100 (174)
T 1yfu_A 43 GPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRR----------------------ERADLKEGDIFLLPPHVRHSPQRP 100 (174)
T ss_dssp SCBCCCCEEECSSCEEEEEEESCEEEEEEETTEE----------------------EEEEECTTCEEEECTTCCEEEEBC
T ss_pred CCCcCccCcCCCCceEEEEEeeEEEEEEEcCCce----------------------eeEEECCCCEEEeCCCCCcCcccc
Confidence 4555566666789999999999999999864311 347999999999999999999776
Q ss_pred C
Q 048197 169 G 169 (480)
Q Consensus 169 G 169 (480)
+
T Consensus 101 ~ 101 (174)
T 1yfu_A 101 E 101 (174)
T ss_dssp C
T ss_pred C
Confidence 5
No 163
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.53 E-value=0.0003 Score=62.53 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=56.8
Q ss_pred eccccccccccccCCceEEEEEEeeEEEEEEecC--CceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEec
Q 048197 353 LYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAEN--GENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTN 426 (480)
Q Consensus 353 L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~--G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts 426 (480)
....++...|-|.+++|+.||++|+.++.+-+.. +...-.-.|++|++++||+|..|.-.|. +.++++-|...
T Consensus 36 ~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~-~e~~vLLiEp~ 110 (140)
T 3d0j_A 36 NDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ-KDTKMMYVQDS 110 (140)
T ss_dssp GBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC-TTCEEEEEEES
T ss_pred CCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC-CceEEEEEEeC
Confidence 3456788899999999999999999999999631 1111123699999999999999998885 45777777644
No 164
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.50 E-value=0.0002 Score=63.90 Aligned_cols=75 Identities=4% Similarity=-0.158 Sum_probs=56.1
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
|-.+..++++||+...+|.|...+.+||++|+..... | .| .+-..+++||.+++|+
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~---g---~~------------------~~~~~~~~Gd~~~~p~ 98 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRG---G---KA------------------AGGDTAIAPGYGYESA 98 (145)
T ss_dssp TEEEEEEEECTTEEECCEEESSCEEEEEEEEEEEETT---C---GG------------------GTSEEEESSEEEEECT
T ss_pred ccEEEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcC---C---CE------------------ecceEeCCCEEEEECc
Confidence 4467789999999999999998999999999998531 1 11 0026899999999999
Q ss_pred CCEEE-EEcCCCCcEEEEEEee
Q 048197 160 GSANW-IYNDGPSELVVVALVD 180 (480)
Q Consensus 160 G~~h~-~~N~G~~~l~~v~~~d 180 (480)
|..|. ..+. ++.+++.+++
T Consensus 99 g~~H~p~~~~--e~~~~l~~~~ 118 (145)
T 2o1q_A 99 NARHDKTEFP--VASEFYMSFL 118 (145)
T ss_dssp TCEESCCEEE--EEEEEEEEEE
T ss_pred CCccCCeECC--CCeEEEEEEC
Confidence 99998 5443 3344454544
No 165
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.47 E-value=0.00047 Score=63.78 Aligned_cols=79 Identities=10% Similarity=0.123 Sum_probs=62.8
Q ss_pred eeEEeeeeccccccccccccC------CceEEEEEEeeEEEEEEecCCceE-----------------EeeecCCccEEE
Q 048197 346 LSAEKGNLYQNAMMAPHWNLN------AHSVVYITRGNGRMQIVAENGENV-----------------FDGQIREGQLIV 402 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~n------A~ei~yV~~G~grv~vv~~~G~~~-----------------f~~~l~~GdV~v 402 (480)
..+-.+.|.||.+.+.|+|++ -.|=.+|..|.+++.+ .+.... =.-.|++||.+.
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 677889999999999999999 8899999999977766 322110 001699999999
Q ss_pred ECCCcEEEEEcCCCCeEEEEEEec
Q 048197 403 VPQGFAVVKRASNRGLEWISFKTN 426 (480)
Q Consensus 403 VPqg~~~~~~ag~e~l~~v~f~ts 426 (480)
||+|..|++.|+.+++.+..|.+.
T Consensus 131 Ippg~~H~f~ageegvli~EvSt~ 154 (175)
T 2y0o_A 131 IPPNTKHWFQAGEEGAVVTEMSST 154 (175)
T ss_dssp ECTTCCEEEEEEEEEEEEEEEEEC
T ss_pred ECCCCcEEEEeCCCCEEEEEEeCC
Confidence 999999999997677777777654
No 166
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.47 E-value=0.0006 Score=61.99 Aligned_cols=73 Identities=11% Similarity=0.093 Sum_probs=59.2
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC---CCCeEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS---NRGLEWI 421 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag---~e~l~~v 421 (480)
+..+..+++.||+...+|.|+. .+.+||++|+.++ +.++ ..+.+||.++.|.|..|...+. ++++.++
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~e~~-----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~ 111 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---KEHD-----WVAHAGSVVYETASTRHTPQSAYAEGPDIITF 111 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---TTSS-----CCBCTTCEEEECSSEEECEEESSSSSSCEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---eCCC-----eEECCCeEEEECCCCcceeEeCCCCCCCEEEE
Confidence 4778899999999999999987 6888999999774 2332 2689999999999999987654 5788877
Q ss_pred EEEec
Q 048197 422 SFKTN 426 (480)
Q Consensus 422 ~f~ts 426 (480)
..++.
T Consensus 112 ~~~~G 116 (159)
T 3ebr_A 112 NIVAG 116 (159)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 76544
No 167
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.38 E-value=0.00053 Score=63.07 Aligned_cols=63 Identities=22% Similarity=0.155 Sum_probs=46.8
Q ss_pred CCeeecCcccCCCeEEEEEeceEEEEEEcCCCcc-chhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcC
Q 048197 90 QRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPE-TYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYND 168 (480)
Q Consensus 90 p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~e-tf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~ 168 (480)
||.-.-=|+++.+|++||++|+..+.+...|.++ +| |...|++||+|.+|+|++|+=.-.
T Consensus 43 Pn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~-------------------~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 43 PNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKF-------------------IDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEE-------------------EEEEECTTEEEEECTTCCEEEEEC
T ss_pred CCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccce-------------------eeEEECCCCEEEcCCCCCcCCccc
Confidence 4443333445699999999999999998755221 12 347999999999999999998665
Q ss_pred CCC
Q 048197 169 GPS 171 (480)
Q Consensus 169 G~~ 171 (480)
.+.
T Consensus 104 ~e~ 106 (176)
T 1zvf_A 104 ADT 106 (176)
T ss_dssp TTC
T ss_pred CCc
Confidence 443
No 168
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.34 E-value=0.0004 Score=65.14 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=56.8
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC-CCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS-NRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag-~e~l~~v~f 423 (480)
+..+..+++.||+.+.+|+|+ ..|+.||++|.-. +.. ..+.+||.+++|.|..|...++ .+++..+.+
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de~------~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DET------DRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CSS------SEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CCc------EEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 356789999999999999995 5599999999844 332 3588999999999999998776 778887766
Q ss_pred E
Q 048197 424 K 424 (480)
Q Consensus 424 ~ 424 (480)
.
T Consensus 193 ~ 193 (195)
T 2q1z_B 193 T 193 (195)
T ss_dssp E
T ss_pred e
Confidence 5
No 169
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.26 E-value=0.00089 Score=61.58 Aligned_cols=59 Identities=17% Similarity=0.284 Sum_probs=46.5
Q ss_pred ccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCC
Q 048197 354 YQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASN 415 (480)
Q Consensus 354 ~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~ 415 (480)
.||+-+-=|.| ...|+.||++|+..+.+.+. |. .-+-.|++||+|++|+|-+|.-.+..
T Consensus 43 Gpn~r~d~H~h-~~dE~FyvlkG~m~i~v~d~-g~-~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 43 GPNHRTDYHDD-PLEEFFYQLRGNAYLNLWVD-GR-RERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SCBCCCCEEEC-SSCEEEEEEESCEEEEEEET-TE-EEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CCCcCccCcCC-CCceEEEEEeeEEEEEEEcC-Cc-eeeEEECCCCEEEeCCCCCcCccccC
Confidence 35555666765 78899999999999999984 42 12337999999999999999876543
No 170
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.14 E-value=0.0032 Score=58.19 Aligned_cols=97 Identities=11% Similarity=0.106 Sum_probs=60.0
Q ss_pred CeeEEEEEEcCCeeecCcccC-------CCeEEEEEeceEEEEEEcCCCccchhhhhh-cccccccccccccceeEeecC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTN-------TPELFYVVQGRGIHGAVFPGCPETYQESQQ-RSSESQSRSQDQHQKVRQIRE 151 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~-------a~el~yV~~G~g~~g~v~pg~~etf~~~~~-~~~~~~~~~~d~~qk~~~l~~ 151 (480)
.+....+.+.||.....|+|. -.|-++|+.|.+.+-+ +|.... .+.- --.+..+... --+...|++
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~--~~~v~v~dg~~~~~~--a~~~i~L~p 125 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTP--LPKVLPPQEDREHYT--VWHEIELEP 125 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCS--SCSCCCCGGGGGGCC--CCEEEEECT
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCcccc--CcceeccCCceeeec--CCcEEEECC
Confidence 377788999999999888874 4677779999977654 442110 0000 0000000000 012469999
Q ss_pred CcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCC
Q 048197 152 GDLVALPTGSANWIYNDGPSELVVVALVDVGNS 184 (480)
Q Consensus 152 GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~ 184 (480)
||.+.||+|+.||+.| |.+. ++|.-+.+.|.
T Consensus 126 GesvtIppg~~H~f~a-geeg-vli~EvSt~~d 156 (175)
T 2y0o_A 126 GGQYTIPPNTKHWFQA-GEEG-AVVTEMSSTST 156 (175)
T ss_dssp TCEEEECTTCCEEEEE-EEEE-EEEEEEEECCC
T ss_pred CCEEEECCCCcEEEEe-CCCC-EEEEEEeCCCC
Confidence 9999999999999999 3344 44444445444
No 171
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.13 E-value=0.008 Score=53.59 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=70.2
Q ss_pred cCCCeEEEEEec-CCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecC-CccEE
Q 048197 324 NPRGGRVTTVNR-FNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIR-EGQLI 401 (480)
Q Consensus 324 ~~~~G~i~~~~~-~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~-~GdV~ 401 (480)
....|.++.+.. .+.|. . ..=-.......||..+.+|.|...++++++++|+..|.+-|......+ .|. +-..+
T Consensus 14 ~D~RG~L~~~e~~~~ipf-~-ikRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~--~L~~~~~gL 89 (141)
T 2pa7_A 14 IDSRGSLVAIEENKNIPF-S-IKRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEI--TLDSPAVGL 89 (141)
T ss_dssp EETTEEEEEEETTTTSSS-C-CCEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEE--EECCTTEEE
T ss_pred ecCCCcEEEEeccCCCCC-C-ccEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEE--EECCCCcEE
Confidence 345899998887 44454 1 111122223459999999999999999999999999988443222323 343 33469
Q ss_pred EECCCcEEEEEcCCCCeEEEEEEecC
Q 048197 402 VVPQGFAVVKRASNRGLEWISFKTND 427 (480)
Q Consensus 402 vVPqg~~~~~~ag~e~l~~v~f~ts~ 427 (480)
.||.|.+|.+.+-+++..++.+.+..
T Consensus 90 ~IppgvWh~~~~~s~~avllvlas~~ 115 (141)
T 2pa7_A 90 YVGPAVWHEMHDFSSDCVMMVLASDY 115 (141)
T ss_dssp EECTTCEEEEECCCTTCEEEEEESSC
T ss_pred EeCCCEEEEEEEcCCCeEEEEECCCC
Confidence 99999999998876678888887554
No 172
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.03 E-value=0.013 Score=53.71 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=69.4
Q ss_pred cCCceE-EEeCCC--ChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceE-EEEEEcCCCcc-chhhhhhccccc
Q 048197 61 SEAGVT-EFWDQN--DEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRG-IHGAVFPGCPE-TYQESQQRSSES 135 (480)
Q Consensus 61 se~G~~-e~~~~~--~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g-~~g~v~pg~~e-tf~~~~~~~~~~ 135 (480)
.|||.+ |+|-.. ...-+ ...+.+..-|.++.....|-.+++|+.|...|.+ .+-++.|++.. ++
T Consensus 27 PEGG~yret~rs~~~~~~~R-~~~T~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~---------- 95 (170)
T 1yud_A 27 VEGGFYRSSYRSETAFDPSR-QLWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTA---------- 95 (170)
T ss_dssp TTSSEEEEEEECSSBSSSSS-BSCEEEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEE----------
T ss_pred CCCceEEEeecCCCCCCCCC-ccceEEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEE----------
Confidence 499998 456442 11112 3467777889999977777778999999999997 77788776431 10
Q ss_pred cccccccccee-EeecCCcE--EEeCCCCEEEEEcC-CCCcEEEEEEee
Q 048197 136 QSRSQDQHQKV-RQIREGDL--VALPTGSANWIYND-GPSELVVVALVD 180 (480)
Q Consensus 136 ~~~~~d~~qk~-~~l~~GDV--~~iPaG~~h~~~N~-G~~~l~~v~~~d 180 (480)
++ .++.+|++ ++||+|+-+...+. | +.+.+-|+..
T Consensus 96 ---------~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g-~~~LV~C~Va 134 (170)
T 1yud_A 96 ---------QLGLDLAAGERPQFLVPKGCIFGSAMNQD-GFSLVGCMVS 134 (170)
T ss_dssp ---------EESSCTTTTEESCEEECTTCEEEEEESSS-SEEEEEEEES
T ss_pred ---------EeCCCcccCceeEEEECCCCEEEEEECCC-CcEEEEEEEC
Confidence 11 25889999 99999999999997 5 4444444433
No 173
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.03 E-value=0.0023 Score=58.82 Aligned_cols=52 Identities=17% Similarity=0.179 Sum_probs=41.0
Q ss_pred ccCCceEEEEEEeeEEEEEEecCC---ceEEeeecCCccEEEECCCcEEEEEcCCC
Q 048197 364 NLNAHSVVYITRGNGRMQIVAENG---ENVFDGQIREGQLIVVPQGFAVVKRASNR 416 (480)
Q Consensus 364 h~nA~ei~yV~~G~grv~vv~~~G---~~~f~~~l~~GdV~vVPqg~~~~~~ag~e 416 (480)
|-...|+.|+++|+..+.+.+. | .+.-+-.|++||+|++|+|.+|.-.+..+
T Consensus 51 ~~~~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e 105 (176)
T 1zvf_A 51 INPTPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRFAD 105 (176)
T ss_dssp ECSSCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred CCCCceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCcccCC
Confidence 3457899999999999999994 4 22234479999999999999998755433
No 174
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.98 E-value=0.0068 Score=55.94 Aligned_cols=74 Identities=7% Similarity=-0.047 Sum_probs=58.7
Q ss_pred eccccccccccccCCceEEEEEEeeEEEEEEecCCc-----eEEeeecC---CccEEEECCCcEEEEEcCCC-CeEEEEE
Q 048197 353 LYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGE-----NVFDGQIR---EGQLIVVPQGFAVVKRASNR-GLEWISF 423 (480)
Q Consensus 353 L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~-----~~f~~~l~---~GdV~vVPqg~~~~~~ag~e-~l~~v~f 423 (480)
..+|.++..|||..-.++++|++|+..+-++|-... +.....|. ....++||.|++|-..+-++ ++.++.+
T Consensus 60 s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 60 VLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp ECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 368999999999999999999999999999986421 12333566 67899999999999887544 7877776
Q ss_pred Eec
Q 048197 424 KTN 426 (480)
Q Consensus 424 ~ts 426 (480)
.+.
T Consensus 140 ~s~ 142 (174)
T 3ejk_A 140 TDI 142 (174)
T ss_dssp ESS
T ss_pred CCC
Confidence 554
No 175
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=96.96 E-value=0.003 Score=55.46 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=43.8
Q ss_pred ccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCC--CCeEEEEE
Q 048197 360 APHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASN--RGLEWISF 423 (480)
Q Consensus 360 ~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~--e~l~~v~f 423 (480)
.||.| +..+++||++|++.+.+ +|+ .+ .+++||+++||+|.+|...+.. ++++++.+
T Consensus 32 ~p~~h-~~~~i~~v~~G~~~~~i---~~~-~~--~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGM-KGYILNLTIRGQGVVKN---QGR-EF--VCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCC-SSEEEEEEEEECEEEEE---TTE-EE--EECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCC-CceEEEEEEEeEEEEEE---CCE-EE--EecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 48886 57799999999999987 233 34 6999999999999999875532 55665443
No 176
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=96.96 E-value=0.002 Score=58.90 Aligned_cols=73 Identities=14% Similarity=0.106 Sum_probs=57.0
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCC---CCeEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASN---RGLEWI 421 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~---e~l~~v 421 (480)
+..+.++++.||+...+|+|+. .+.+||++|+.+.+ ..+. ..+.+||.++.|.|..|...+.. +++..+
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~---~~~~----~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l 113 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT---EYPG----QKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVI 113 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET---TCTT----SCEETTEEEEECTTCEECEECCTTCSSCEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC---CCce----EEECCCeEEEeCCCCceeeEeCCCCCCCcEEE
Confidence 4678899999999999999975 68999999998752 1112 25789999999999999977632 377666
Q ss_pred EEEe
Q 048197 422 SFKT 425 (480)
Q Consensus 422 ~f~t 425 (480)
.+++
T Consensus 114 ~v~~ 117 (165)
T 3cjx_A 114 FMLS 117 (165)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 177
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.85 E-value=0.022 Score=52.31 Aligned_cols=129 Identities=15% Similarity=0.178 Sum_probs=85.5
Q ss_pred CCCeEEEEEecCCCCc--ccccceeEEeeeeccccccccccccCCceEEEEEEeeE-EEEEEecCCce---EEeeecCCc
Q 048197 325 PRGGRVTTVNRFNLPI--LRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNG-RMQIVAENGEN---VFDGQIREG 398 (480)
Q Consensus 325 ~~~G~i~~~~~~~~P~--L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~g-rv~vv~~~G~~---~f~~~l~~G 398 (480)
|+||+.++..... |. -...-.++...-|.+|.....|-+ +|+|+-|...|.+ .+.++.++|.. ++-.++.+|
T Consensus 27 PEGG~yret~rs~-~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 27 VEGGFYRSSYRSE-TAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp TTSSEEEEEEECS-SBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CCCceEEEeecCC-CCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 5789988776543 21 112236777788999997666664 6899999999996 89999998872 344568999
Q ss_pred cE--EEECCCcEEEEEcCCCCeEEEEEEecC--CCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHH
Q 048197 399 QL--IVVPQGFAVVKRASNRGLEWISFKTND--VAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLK 464 (480)
Q Consensus 399 dV--~vVPqg~~~~~~ag~e~l~~v~f~ts~--~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~ 464 (480)
++ ++||+|........+.+..+|+-.... ....+.|+ +.+-|.+.|---++.+++|.
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~~~LV~C~VaPGF~f~dfel~---------~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDGFSLVGCMVSPGFTFDDFELF---------SQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp EESCEEECTTCEEEEEESSSSEEEEEEEESSCCCGGGCCBC---------BHHHHHHSCCTTHHHHTTSC
T ss_pred ceeEEEECCCCEEEEEECCCCcEEEEEEECCCccCCceEEc---------CHHHHHhHCchhHHHHHHhh
Confidence 99 999999998875432245555433333 22344454 45556666655555555554
No 178
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=96.80 E-value=0.0057 Score=52.80 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=44.4
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSAN 163 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h 163 (480)
.--...||.+...+ ....|++||++|++++..- ++ + ...|++||+++||+|..-
T Consensus 45 GvWe~tPG~~~~~~-~~~~E~~~iLeG~~~lt~d--dG-~----------------------~~~l~aGD~~~~P~G~~g 98 (116)
T 3es4_A 45 AVWMAEPGIYNYAG-RDLEETFVVVEGEALYSQA--DA-D----------------------PVKIGPGSIVSIAKGVPS 98 (116)
T ss_dssp EEEEECSEEEEECC-CSEEEEEEEEECCEEEEET--TC-C----------------------CEEECTTEEEEECTTCCE
T ss_pred EEEecCCceeECee-CCCcEEEEEEEeEEEEEeC--CC-e----------------------EEEECCCCEEEECCCCeE
Confidence 33489999887543 3445999999999999852 22 1 369999999999999887
Q ss_pred EEEcC
Q 048197 164 WIYND 168 (480)
Q Consensus 164 ~~~N~ 168 (480)
-+.-.
T Consensus 99 tWev~ 103 (116)
T 3es4_A 99 RLEIL 103 (116)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66443
No 179
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.76 E-value=0.0033 Score=61.90 Aligned_cols=53 Identities=19% Similarity=0.317 Sum_probs=42.1
Q ss_pred cccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC
Q 048197 359 MAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS 414 (480)
Q Consensus 359 ~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag 414 (480)
.-=| |....|+.|+++|..++.+.+. |. .-+-.|++||+|++|+|.+|.=.+.
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~-~~~V~i~eGemfllP~gv~HsP~r~ 96 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLEQ-GK-HRDVVIRQGEIFLLPARVPHSPQRF 96 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEET-TE-EEEEEECTTEEEEECTTCCEEEEEC
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEeC-Cc-eeeEEECCCeEEEeCCCCCcCCccc
Confidence 4445 5668899999999999999995 42 1233799999999999999986553
No 180
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.72 E-value=0.0073 Score=58.41 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=52.9
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+|++..+.+ .|....-.+ ..+|+.||++|+..++. .|..+ ++++||+++||+|..+...+...-..+++..
T Consensus 46 ~~~~G~~~~-~g~~~v~~~--p~dE~~~VleG~~~lt~---~g~~~---~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVEAY--PYTEMLVMHRGSVTLTS---GTDSV---TLSTGESAVIGRGTQVRIDAQPESLWAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEESSC--SSEEEEEEEESEEEEEE---TTEEE---EEETTCEEEECTTCCEEEEECTTEEEEEEEE
T ss_pred CeEEEEEEe-ccccccccC--CCcEEEEEEEeEEEEEC---CCeEE---EEcCCCEEEECCCCEEEEEecCCeEEEEEec
Confidence 578888888 666665444 24899999999999987 35554 5999999999999998887654433333434
Q ss_pred e
Q 048197 425 T 425 (480)
Q Consensus 425 t 425 (480)
.
T Consensus 117 ~ 117 (238)
T 3myx_A 117 T 117 (238)
T ss_dssp C
T ss_pred c
Confidence 3
No 181
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=96.60 E-value=0.0026 Score=54.99 Aligned_cols=68 Identities=7% Similarity=0.065 Sum_probs=46.8
Q ss_pred eEEeeeeccccccccccccCCc-eEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 347 SAEKGNLYQNAMMAPHWNLNAH-SVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 347 sa~~v~L~pgam~~PHwh~nA~-ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
.+..=..+||.....+ ..+ |++||++|+++++. .+|..+ ++++||+++||+|+.-.... .+.+.=+.|
T Consensus 43 ~~GvWe~tPG~~~~~~---~~~~E~~~iLeG~~~lt~--ddG~~~---~l~aGD~~~~P~G~~gtWev-~e~vrK~~~ 111 (116)
T 3es4_A 43 IVAVWMAEPGIYNYAG---RDLEETFVVVEGEALYSQ--ADADPV---KIGPGSIVSIAKGVPSRLEI-LSSFRKLAT 111 (116)
T ss_dssp EEEEEEECSEEEEECC---CSEEEEEEEEECCEEEEE--TTCCCE---EECTTEEEEECTTCCEEEEE-CSCEEEEEE
T ss_pred EEEEEecCCceeECee---CCCcEEEEEEEeEEEEEe--CCCeEE---EECCCCEEEECCCCeEEEEE-eEEEeEEEE
Confidence 3334477888876433 445 99999999999874 446643 69999999999999744322 234444444
No 182
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=96.57 E-value=0.018 Score=52.82 Aligned_cols=83 Identities=13% Similarity=0.084 Sum_probs=66.6
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCc---eEEeeecCCccEEEECCCcEEEEEc-CCCCeEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGE---NVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEW 420 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~---~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~ 420 (480)
++++..+...||.-..+|=|.+++.+++|++|+...++....+. ..-...+.+||++++|.+.+|.+.| +++.+.-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 46777889999999999999999999999999999998864432 1123468999999999999999855 6777777
Q ss_pred EEEEecC
Q 048197 421 ISFKTND 427 (480)
Q Consensus 421 v~f~ts~ 427 (480)
|-+..-.
T Consensus 148 lHvY~pp 154 (171)
T 3eqe_A 148 LHVYSPP 154 (171)
T ss_dssp EEEEESC
T ss_pred EEEeCCC
Confidence 7666543
No 183
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.52 E-value=0.0052 Score=60.49 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=43.2
Q ss_pred cccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCc
Q 048197 97 SYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSE 172 (480)
Q Consensus 97 h~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~ 172 (480)
|+.+.+|++|+++|...+-++..|. | |.-.|++||+|++|+|++|.=.-..+.-
T Consensus 47 H~~~~dE~FyqlkG~m~l~~~d~g~---~-------------------~~V~i~eGemfllP~gv~HsP~r~~et~ 100 (286)
T 2qnk_A 47 HIEEGEEVFYQLEGDMVLRVLEQGK---H-------------------RDVVIRQGEIFLLPARVPHSPQRFANTV 100 (286)
T ss_dssp EECSSCEEEEEEESCEEEEEEETTE---E-------------------EEEEECTTEEEEECTTCCEEEEECTTCE
T ss_pred cCCCCCeEEEEEeCeEEEEEEeCCc---e-------------------eeEEECCCeEEEeCCCCCcCCcccCCeE
Confidence 3335899999999999999986542 1 2469999999999999999988755443
No 184
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=96.43 E-value=0.023 Score=52.22 Aligned_cols=84 Identities=12% Similarity=0.114 Sum_probs=65.7
Q ss_pred CeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcC-CC-ccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 80 NVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFP-GC-PETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~p-g~-~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
++.+.-++..||.-..+|=|. +..+++|++|+....+-.+ +. ++ .-+...+.+||+++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~-------------------~~~~~~l~~G~~~~ 128 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAE-------------------LSNSYFVHEGECLI 128 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEE-------------------EEEEEEEETTCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCcee-------------------ecceEEeCCCcEEE
Confidence 678888999999988887665 6788899999998875432 11 11 01256899999999
Q ss_pred eCCCCEEEEEcCCCCcEEEEEEeeCC
Q 048197 157 LPTGSANWIYNDGPSELVVVALVDVG 182 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v~~~d~~ 182 (480)
+|+|.+|.+.|.++++.+.|-++-..
T Consensus 129 ~~~~~iH~V~N~~~~~aVSlHvY~pp 154 (171)
T 3eqe_A 129 STKGLIHKMSNPTSERMVSLHVYSPP 154 (171)
T ss_dssp ECTTCEEEEECCSSSCEEEEEEEESC
T ss_pred eCCCCEEEEECCCCCCEEEEEEeCCC
Confidence 99999999999999998888776443
No 185
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.40 E-value=0.0062 Score=58.29 Aligned_cols=67 Identities=12% Similarity=0.075 Sum_probs=53.8
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
+..+.++++.||+.+.+|+|+ ..|.+||++|... +. +..+.+||.++.|.|..|.-.+ .+++.++..
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~------~~~~~~Gd~~~~P~g~~H~p~a-~~gc~~~vk 108 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE------HGDYPAGTYVRNPPTTSHVPGS-AEGCTIFVK 108 (223)
T ss_dssp CEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET------TEEEETTEEEEECTTCEECCEE-SSCEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC------CeEECCCeEEEeCCCCccccEe-CCCCEEEEE
Confidence 346778999999999999996 5688999999964 43 2368899999999999998666 667765544
No 186
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.39 E-value=0.0074 Score=54.57 Aligned_cols=76 Identities=12% Similarity=-0.027 Sum_probs=56.4
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+-...++++.||+.+.+||||- .|.+|||+|+-.. ..|..--+..+.+|+.++-|+|..|+....+++.+++.+.
T Consensus 45 g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~----~~Gd~~~~~~~~aGsYv~ePpGs~H~p~~~~~~~~~~~~~ 119 (153)
T 3bal_A 45 SSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEV----RGGEQEGGSTAYAPSYGFESSGALHGKTFFPVESQFYMTF 119 (153)
T ss_dssp TEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEE----TTCGGGTSEEEESSEEEEECTTCEESCCEESSCEEEEEEE
T ss_pred ceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEe----cCccccCccccCCCeEEEcCCCCcccceeCCCCeEEEEEE
Confidence 5778889999999999999985 5779999998764 3343111345789999999999999854444555555444
Q ss_pred e
Q 048197 425 T 425 (480)
Q Consensus 425 t 425 (480)
+
T Consensus 120 ~ 120 (153)
T 3bal_A 120 L 120 (153)
T ss_dssp E
T ss_pred E
Confidence 3
No 187
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=96.37 E-value=0.0071 Score=53.71 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=48.9
Q ss_pred CCeeecCccc-CCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcC
Q 048197 90 QRGLVVPSYT-NTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYND 168 (480)
Q Consensus 90 p~gl~lPh~~-~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~ 168 (480)
+.++.-.|-| +.+|++||++|+.++-+-..+.. ...| ....+++|++++||+|+-|--...
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~---------------~~~d---~~V~l~~Ge~yvVPkGveH~p~a~ 99 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKEND---------------KFNI---ELTLMEKGKVYNVPAECWFYSITQ 99 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETT---------------EEEE---EEEECCTTCCEEECTTCEEEEEEC
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCC---------------CCcc---ceEEecCCCEEEeCCCccCcccCC
Confidence 3445444444 69999999999999987531100 0011 136899999999999999998887
Q ss_pred CCCcEEEEE
Q 048197 169 GPSELVVVA 177 (480)
Q Consensus 169 G~~~l~~v~ 177 (480)
.+..+.+|-
T Consensus 100 ~e~~vLLiE 108 (140)
T 3d0j_A 100 KDTKMMYVQ 108 (140)
T ss_dssp TTCEEEEEE
T ss_pred CceEEEEEE
Confidence 776665553
No 188
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=96.37 E-value=0.026 Score=53.30 Aligned_cols=80 Identities=16% Similarity=0.035 Sum_probs=63.5
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEe--cCCceE---EeeecCCccEEEECC--CcEEEEE-c-CC
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVA--ENGENV---FDGQIREGQLIVVPQ--GFAVVKR-A-SN 415 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~--~~G~~~---f~~~l~~GdV~vVPq--g~~~~~~-a-g~ 415 (480)
.+.+..+...||.-..+|-|.+ +.+++|++|+...++.. .+|..+ -...+.+||+++++. |..|-+. + ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 3677888999999999999997 99999999999999976 334321 124699999999999 8899874 5 46
Q ss_pred CCeEEEEEEe
Q 048197 416 RGLEWISFKT 425 (480)
Q Consensus 416 e~l~~v~f~t 425 (480)
+....|-+..
T Consensus 157 ~~avsLHvY~ 166 (208)
T 2gm6_A 157 RVSISIHVYG 166 (208)
T ss_dssp SCEEEEEEES
T ss_pred CcEEEEEEEc
Confidence 6777776653
No 189
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.25 E-value=0.0078 Score=54.42 Aligned_cols=64 Identities=8% Similarity=-0.008 Sum_probs=53.0
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.|....++.+.||+.+.+|+|...+.+||++|+...+. | + | . +-..+++|+.++-|
T Consensus 44 ~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~---G--d-~-------------~-----~~~~~~aGsYv~eP 99 (153)
T 3bal_A 44 TSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRG---G--E-Q-------------E-----GGSTAYAPSYGFES 99 (153)
T ss_dssp TTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETT---C--G-G-------------G-----TSEEEESSEEEEEC
T ss_pred cceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecC---c--c-c-------------c-----CccccCCCeEEEcC
Confidence 58889999999999999999999999999999987742 1 0 0 0 02578899999999
Q ss_pred CCCEEEEE
Q 048197 159 TGSANWIY 166 (480)
Q Consensus 159 aG~~h~~~ 166 (480)
+|..|+..
T Consensus 100 pGs~H~p~ 107 (153)
T 3bal_A 100 SGALHGKT 107 (153)
T ss_dssp TTCEESCC
T ss_pred CCCcccce
Confidence 99999743
No 190
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=96.16 E-value=0.033 Score=52.65 Aligned_cols=82 Identities=11% Similarity=0.125 Sum_probs=65.5
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc-C--CCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF-P--GCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~-p--g~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
.+.+.-+...||....+|-|....+++|++|+....+-. + |.+. ...+...+.+||+++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l------------------~~~~~~~l~~G~v~~ 139 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPV------------------LHGEPTRLEPGHVEA 139 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEE------------------ECSCCEEECTTCEEE
T ss_pred CEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccc------------------cccceEEeCCCCEEE
Confidence 578888999999999999997799999999999877632 1 1110 011357999999999
Q ss_pred eCC--CCEEEEEcC-CCCcEEEEEEe
Q 048197 157 LPT--GSANWIYND-GPSELVVVALV 179 (480)
Q Consensus 157 iPa--G~~h~~~N~-G~~~l~~v~~~ 179 (480)
+++ |..|-+.|. ++++.+.|-++
T Consensus 140 ~~~~~g~iH~V~N~~~~~~avsLHvY 165 (208)
T 2gm6_A 140 VSPTVGDIHRVHNAYDDRVSISIHVY 165 (208)
T ss_dssp EBTTTBCCEEEEESCSSSCEEEEEEE
T ss_pred ECCCCCCeEEeccCCCCCcEEEEEEE
Confidence 999 999999998 78888887765
No 191
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=95.96 E-value=0.012 Score=56.75 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=47.0
Q ss_pred eEEEEEEcCCe--eecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 82 AVFRHRIQQRG--LVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 82 s~~r~~i~p~g--l~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
-+....+.... ..-+|||+.-+++||++|+|. . +.-.|- ....+.+||++++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~-i~~~~~----------------------~~~~l~~g~l~~i~p 63 (276)
T 3gbg_A 8 QTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-L-IDKNCL----------------------VSYEINSSSIILLKK 63 (276)
T ss_dssp EEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-E-EETTTT----------------------EEEEECTTEEEEECT
T ss_pred hhhhhhhhcccchhccHhhhcceEEEEEecCceE-E-ECCccc----------------------eeEEEcCCCEEEEcC
Confidence 34445555544 346889999999999999999 4 432221 136999999999999
Q ss_pred CCEEEEEcC
Q 048197 160 GSANWIYND 168 (480)
Q Consensus 160 G~~h~~~N~ 168 (480)
|.+|.+...
T Consensus 64 ~~~h~~~~~ 72 (276)
T 3gbg_A 64 NSIQRFSLT 72 (276)
T ss_dssp TCEEEEEEE
T ss_pred CCceeeccc
Confidence 999998765
No 192
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=95.80 E-value=0.095 Score=48.22 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=78.3
Q ss_pred CcccccccCCCCCCcceecCCceE-EEeCCCChhccccCee-EEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcC
Q 048197 43 TQCNIQDLNALEPQQRVESEAGVT-EFWDQNDEQLQCANVA-VFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFP 119 (480)
Q Consensus 43 ~~C~~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~gvs-~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~p 119 (480)
.+..+..+...+|. ++.-+-|.+ |.|..+...+. .+. .......+|.++-.|||. -.++++|++|+...-+++-
T Consensus 16 ~~t~i~gv~ii~~~-~~~D~RG~f~e~~~~~~~~~~--~f~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~ 92 (174)
T 3ejk_A 16 ILLPVEGAQLSELR-QIPAEGGPVLHMLRLDSPQFS--QFGEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDG 92 (174)
T ss_dssp EECSSTTCEEEECC-EECCTTSCEECCCCTTCTTCC--CCCEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECC
T ss_pred ccCCCCCEEEEeCC-cEecCCcCEEEEEecCccCCC--CeeEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeC
Confidence 33456666677775 455666665 56665543221 111 112234788899999985 7899999999999999864
Q ss_pred CC-ccchhhhhhcccccccccccccceeEeec---CCcEEEeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 120 GC-PETYQESQQRSSESQSRSQDQHQKVRQIR---EGDLVALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 120 g~-~etf~~~~~~~~~~~~~~~d~~qk~~~l~---~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
-. +.|| .++. ...|. ..-.+.||+|++|=++|.++++.+++.+.+
T Consensus 93 R~~SpTf---------------g~~~-~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~~s 141 (174)
T 3ejk_A 93 REKSPTS---------------GRLA-QVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTD 141 (174)
T ss_dssp CTTCTTT---------------TCEE-EEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEEES
T ss_pred CCCCCCC---------------CeEE-EEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEECC
Confidence 21 2244 1111 34565 567999999999999999886677666543
No 193
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.75 E-value=0.043 Score=50.97 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=55.0
Q ss_pred cccccccccc--cCCceEEEEEEeeEEEEEEecCC-c----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEEEe
Q 048197 355 QNAMMAPHWN--LNAHSVVYITRGNGRMQIVAENG-E----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISFKT 425 (480)
Q Consensus 355 pgam~~PHwh--~nA~ei~yV~~G~grv~vv~~~G-~----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f~t 425 (480)
+|.++..||| ..-.++++|++|+...-+||-.- . +.....|.+ +..++||.|++|-..+-+++++++..-+
T Consensus 57 ~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 136 (185)
T 1ep0_A 57 RGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCT 136 (185)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred CCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEecC
Confidence 7999999999 66689999999999888888642 1 223335644 6899999999999988666666666554
Q ss_pred c
Q 048197 426 N 426 (480)
Q Consensus 426 s 426 (480)
.
T Consensus 137 ~ 137 (185)
T 1ep0_A 137 E 137 (185)
T ss_dssp S
T ss_pred C
Confidence 3
No 194
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=95.70 E-value=0.077 Score=49.76 Aligned_cols=73 Identities=14% Similarity=0.224 Sum_probs=55.5
Q ss_pred ccccccccccccC---CceEEEEEEeeEEEEEEecCCc-----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 354 YQNAMMAPHWNLN---AHSVVYITRGNGRMQIVAENGE-----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 354 ~pgam~~PHwh~n---A~ei~yV~~G~grv~vv~~~G~-----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
.+|-++..|||.. -.++++|++|+...-+||-.-. +.....|.+ +..++||.|++|-..+-.++.+++..
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly~ 152 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFI 152 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEE
Confidence 4899999999965 5799999999998888886311 123335654 78999999999999887667777655
Q ss_pred Eec
Q 048197 424 KTN 426 (480)
Q Consensus 424 ~ts 426 (480)
-+.
T Consensus 153 ~s~ 155 (196)
T 1wlt_A 153 THN 155 (196)
T ss_dssp ESS
T ss_pred eCC
Confidence 443
No 195
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=95.62 E-value=0.034 Score=52.18 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=57.5
Q ss_pred ccccccccccccCCceEEEEEE-eeEEEEEEecC-----CceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEec
Q 048197 354 YQNAMMAPHWNLNAHSVVYITR-GNGRMQIVAEN-----GENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTN 426 (480)
Q Consensus 354 ~pgam~~PHwh~nA~ei~yV~~-G~grv~vv~~~-----G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts 426 (480)
.+|.++..|+|+ -.++++|++ |+...-+||-. |+. ..-.|..+..++||.|++|-..+-+++.+++...+.
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~-~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 144 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNT-YQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVND 144 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCE-EEEEECTTEEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeE-EEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEECCC
Confidence 579999999994 569999999 99998899876 443 334677899999999999999887667777665543
No 196
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.59 E-value=0.055 Score=50.19 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=53.6
Q ss_pred ccccccccccc---CCceEEEEEEeeEEEEEEecC-Cc----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 355 QNAMMAPHWNL---NAHSVVYITRGNGRMQIVAEN-GE----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 355 pgam~~PHwh~---nA~ei~yV~~G~grv~vv~~~-G~----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+|-++..|||. .-.++++|++|+...-+||-. +. +.....|.+ +..++||.|++|-..+-+++.+++..-
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~ 135 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKA 135 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEc
Confidence 79999999996 567999999999988888864 21 123335544 689999999999998866666555554
Q ss_pred e
Q 048197 425 T 425 (480)
Q Consensus 425 t 425 (480)
+
T Consensus 136 s 136 (183)
T 1dzr_A 136 T 136 (183)
T ss_dssp S
T ss_pred C
Confidence 3
No 197
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=95.57 E-value=0.025 Score=54.38 Aligned_cols=59 Identities=10% Similarity=0.219 Sum_probs=43.5
Q ss_pred ccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC---CCCeEEE
Q 048197 358 MMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS---NRGLEWI 421 (480)
Q Consensus 358 m~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag---~e~l~~v 421 (480)
.+.+||| +..+++||++|++. .++..+...+ .+.+||++++|+|-+|..... +++++.+
T Consensus 21 ~~~~~~~-~~~~i~~v~~G~~~--~i~~~~~~~~--~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~ 82 (276)
T 3gbg_A 21 IFNNLYI-NDYKMFWIDSGIAK--LIDKNCLVSY--EINSSSIILLKKNSIQRFSLTSLSDENINVS 82 (276)
T ss_dssp EEEEEEC-SSCEEEEESSSCEE--EEETTTTEEE--EECTTEEEEECTTCEEEEEEEECCSSCEEEE
T ss_pred hccHhhh-cceEEEEEecCceE--EECCccceeE--EEcCCCEEEEcCCCceeeccccCCCcceEEE
Confidence 3478997 77899999999999 5664322234 699999999999999886432 3455543
No 198
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.56 E-value=0.052 Score=50.39 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=54.7
Q ss_pred cccccccccc--cCCceEEEEEEeeEEEEEEecCC-c----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEEEe
Q 048197 355 QNAMMAPHWN--LNAHSVVYITRGNGRMQIVAENG-E----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISFKT 425 (480)
Q Consensus 355 pgam~~PHwh--~nA~ei~yV~~G~grv~vv~~~G-~----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f~t 425 (480)
+|.++..||| ..-.++++|++|+...-+||-.- . +.....|.+ +..++||.|++|-..+-+++++++..-+
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 137 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTT 137 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEeCC
Confidence 7999999999 56679999999999888887631 1 223335544 6899999999999988666666666554
Q ss_pred c
Q 048197 426 N 426 (480)
Q Consensus 426 s 426 (480)
.
T Consensus 138 ~ 138 (184)
T 2ixk_A 138 D 138 (184)
T ss_dssp S
T ss_pred C
Confidence 3
No 199
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.55 E-value=0.062 Score=50.74 Aligned_cols=73 Identities=14% Similarity=0.051 Sum_probs=55.2
Q ss_pred eccccccccccccC---CceEEEEEEeeEEEEEEecC-Cc----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEE
Q 048197 353 LYQNAMMAPHWNLN---AHSVVYITRGNGRMQIVAEN-GE----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 353 L~pgam~~PHwh~n---A~ei~yV~~G~grv~vv~~~-G~----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~ 422 (480)
..+|.++..|||.. -.++++|++|++..-+||-. |. +.....|.+ +..++||.|++|-..+-+++.+++.
T Consensus 77 ~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y 156 (205)
T 3ryk_A 77 AEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMY 156 (205)
T ss_dssp SSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEE
T ss_pred CCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEE
Confidence 36899999999953 57999999999999888853 11 123345654 8999999999999888666676665
Q ss_pred EEe
Q 048197 423 FKT 425 (480)
Q Consensus 423 f~t 425 (480)
.-+
T Consensus 157 ~~s 159 (205)
T 3ryk_A 157 KVD 159 (205)
T ss_dssp EES
T ss_pred EcC
Confidence 443
No 200
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.36 E-value=0.074 Score=50.04 Aligned_cols=72 Identities=10% Similarity=0.064 Sum_probs=55.6
Q ss_pred cccccccccccc---CCceEEEEEEeeEEEEEEecC------CceEEeeecC--CccEEEECCCcEEEEEcCCCCeEEEE
Q 048197 354 YQNAMMAPHWNL---NAHSVVYITRGNGRMQIVAEN------GENVFDGQIR--EGQLIVVPQGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 354 ~pgam~~PHwh~---nA~ei~yV~~G~grv~vv~~~------G~~~f~~~l~--~GdV~vVPqg~~~~~~ag~e~l~~v~ 422 (480)
.+|.++..|+|. .-.++++|++|+...-+||-. |+. +...|. .+..++||.||+|-..+-+++.+++.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w-~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRW-EIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCE-EEEEEETTTCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeE-EEEEecCCCCCEEEeCCcceEEEeecCCCeEEEE
Confidence 589999999995 458999999999998899863 332 223454 48899999999999888766777765
Q ss_pred EEec
Q 048197 423 FKTN 426 (480)
Q Consensus 423 f~ts 426 (480)
..++
T Consensus 131 ~~t~ 134 (201)
T 4hn1_A 131 LCSS 134 (201)
T ss_dssp EESS
T ss_pred eCCC
Confidence 5443
No 201
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=95.29 E-value=0.081 Score=49.95 Aligned_cols=72 Identities=11% Similarity=0.101 Sum_probs=54.0
Q ss_pred ccccccccccccC---CceEEEEEEeeEEEEEEecCCc-----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 354 YQNAMMAPHWNLN---AHSVVYITRGNGRMQIVAENGE-----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 354 ~pgam~~PHwh~n---A~ei~yV~~G~grv~vv~~~G~-----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
.+|-++..|||.. -.++++|++|+...-+||-.-. +.....|.+ +..++||.|++|-..+-+++.+++..
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYM 134 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEe
Confidence 4799999999965 5799999999998888886411 123335655 68999999999999886656655554
Q ss_pred Ee
Q 048197 424 KT 425 (480)
Q Consensus 424 ~t 425 (480)
.+
T Consensus 135 ~s 136 (205)
T 1oi6_A 135 LS 136 (205)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 202
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=95.19 E-value=0.058 Score=50.25 Aligned_cols=65 Identities=9% Similarity=0.183 Sum_probs=47.6
Q ss_pred eeeecccc-ccccccccCCceEEEEEEeeEEEEEEecCCc---------------------------------eEEeeec
Q 048197 350 KGNLYQNA-MMAPHWNLNAHSVVYITRGNGRMQIVAENGE---------------------------------NVFDGQI 395 (480)
Q Consensus 350 ~v~L~pga-m~~PHwh~nA~ei~yV~~G~grv~vv~~~G~---------------------------------~~f~~~l 395 (480)
.+-|.+.| ...+|+.+. +.+..++.|+=++.++.|.-. ..+...|
T Consensus 127 ~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 34455544 445577654 678999999999999987310 1234579
Q ss_pred CCccEEEECCCcEEEEEcCC
Q 048197 396 REGQLIVVPQGFAVVKRASN 415 (480)
Q Consensus 396 ~~GdV~vVPqg~~~~~~ag~ 415 (480)
++||+++||.|+.|...+-+
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~ 225 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALD 225 (235)
T ss_dssp CTTCEEEECTTCEEEEEESS
T ss_pred CCCCEEEeCCCCcEEEEECC
Confidence 99999999999999987654
No 203
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=95.07 E-value=0.071 Score=53.98 Aligned_cols=73 Identities=12% Similarity=0.209 Sum_probs=54.2
Q ss_pred eeecc-ccccccccccCCceEEEEEEeeEEEEEE-ecCC--------------------------------ceEEeeecC
Q 048197 351 GNLYQ-NAMMAPHWNLNAHSVVYITRGNGRMQIV-AENG--------------------------------ENVFDGQIR 396 (480)
Q Consensus 351 v~L~p-gam~~PHwh~nA~ei~yV~~G~grv~vv-~~~G--------------------------------~~~f~~~l~ 396 (480)
+-+.| |+...|||.+. +.++..+.|+=++.+. .|.- ...++..|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44445 88999999644 5788888999999999 5431 112456899
Q ss_pred CccEEEECCCcEEEEEcC-CCCeEEEEEE
Q 048197 397 EGQLIVVPQGFAVVKRAS-NRGLEWISFK 424 (480)
Q Consensus 397 ~GdV~vVPqg~~~~~~ag-~e~l~~v~f~ 424 (480)
+|||+|||+||+|+..+. ++..--++|.
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 999999999999999886 3444455665
No 204
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.92 E-value=0.11 Score=49.49 Aligned_cols=72 Identities=10% Similarity=-0.012 Sum_probs=53.6
Q ss_pred ccccccccccccC---CceEEEEEEeeEEEEEEecCCc-----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 354 YQNAMMAPHWNLN---AHSVVYITRGNGRMQIVAENGE-----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 354 ~pgam~~PHwh~n---A~ei~yV~~G~grv~vv~~~G~-----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
.+|-++..|||.. -.++++|++|+...-+||-.-. +.....|.+ +..++||.|++|-..+-+++.+++..
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly~ 142 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYL 142 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEEe
Confidence 3799999999975 5799999999998888886321 123335654 58999999999999886656655554
Q ss_pred Ee
Q 048197 424 KT 425 (480)
Q Consensus 424 ~t 425 (480)
.+
T Consensus 143 ~s 144 (216)
T 2c0z_A 143 SS 144 (216)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 205
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=94.75 E-value=0.095 Score=55.00 Aligned_cols=65 Identities=12% Similarity=0.253 Sum_probs=49.8
Q ss_pred eeeeccccccc--cccccCCceEEEEEEeeEEEEEEecCC---------------ceEEeeecCCccEEEECCCcEEEEE
Q 048197 350 KGNLYQNAMMA--PHWNLNAHSVVYITRGNGRMQIVAENG---------------ENVFDGQIREGQLIVVPQGFAVVKR 412 (480)
Q Consensus 350 ~v~L~pgam~~--PHwh~nA~ei~yV~~G~grv~vv~~~G---------------~~~f~~~l~~GdV~vVPqg~~~~~~ 412 (480)
.+-+.|+|-.. |||- .-+-++..+.|+=++.+..|.- ...++..|++|||+|||+||+|+..
T Consensus 142 n~y~~~~g~~g~~~H~D-~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~ 220 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYD-DVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQAD 220 (442)
T ss_dssp EEEEECTTCBCSCSEEC-SSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEE
T ss_pred ceEECCCCCCCccceEC-CcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEE
Confidence 34566676655 9995 4467788889999999988741 2235668999999999999999987
Q ss_pred cCC
Q 048197 413 ASN 415 (480)
Q Consensus 413 ag~ 415 (480)
+.+
T Consensus 221 s~~ 223 (442)
T 2xdv_A 221 TPA 223 (442)
T ss_dssp CCS
T ss_pred ecC
Confidence 753
No 206
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=94.64 E-value=0.32 Score=45.53 Aligned_cols=81 Identities=10% Similarity=-0.018 Sum_probs=62.5
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEec--CCc----eEEeeecCCccEEEE-CCCcEEEEEc-C-C
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAE--NGE----NVFDGQIREGQLIVV-PQGFAVVKRA-S-N 415 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~--~G~----~~f~~~l~~GdV~vV-Pqg~~~~~~a-g-~ 415 (480)
..++..+...||.-..+|=|.+++.+++|++|+...++.+- +|. ..-...+.+|||.++ |.+..|.+.| + +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 36777789999999999999999999999999999998863 221 112347899999999 8888888754 5 4
Q ss_pred CCeEEEEEEe
Q 048197 416 RGLEWISFKT 425 (480)
Q Consensus 416 e~l~~v~f~t 425 (480)
+...-|-+..
T Consensus 149 ~~avSlHvY~ 158 (200)
T 3eln_A 149 EPAVSLHLYS 158 (200)
T ss_dssp CCEEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 5655555544
No 207
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=94.64 E-value=0.15 Score=48.80 Aligned_cols=72 Identities=13% Similarity=-0.003 Sum_probs=53.3
Q ss_pred ccccccccccccC---CceEEEEEEeeEEEEEEecCCc-----eEEeeecCC--ccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 354 YQNAMMAPHWNLN---AHSVVYITRGNGRMQIVAENGE-----NVFDGQIRE--GQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 354 ~pgam~~PHwh~n---A~ei~yV~~G~grv~vv~~~G~-----~~f~~~l~~--GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
.+|-++..|||.. -.++++|++|+...-+||-.-. +.....|.+ +..++||.|++|-..+-.++.+++..
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~ 153 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYL 153 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEe
Confidence 4799999999965 4799999999998888876311 123335554 68999999999999886656655554
Q ss_pred Ee
Q 048197 424 KT 425 (480)
Q Consensus 424 ~t 425 (480)
.+
T Consensus 154 ~s 155 (225)
T 1upi_A 154 CS 155 (225)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 208
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=94.53 E-value=0.09 Score=53.32 Aligned_cols=73 Identities=10% Similarity=0.156 Sum_probs=54.2
Q ss_pred eeec-cccccccccccCCceEEEEEEeeEEEEEEecCC----------------------------------ceEEeeec
Q 048197 351 GNLY-QNAMMAPHWNLNAHSVVYITRGNGRMQIVAENG----------------------------------ENVFDGQI 395 (480)
Q Consensus 351 v~L~-pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G----------------------------------~~~f~~~l 395 (480)
+-|. +|+...+|+.+. +.|..+++|+=++.++.|.- ...+...|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 3443 556778899877 78999999999999987631 02456789
Q ss_pred CCccEEEECCCcEEEEEcCC-CCeEE-EEEE
Q 048197 396 REGQLIVVPQGFAVVKRASN-RGLEW-ISFK 424 (480)
Q Consensus 396 ~~GdV~vVPqg~~~~~~ag~-e~l~~-v~f~ 424 (480)
++||+++||.||.|...+.+ +++.+ |.|.
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 99999999999999987754 34433 4444
No 209
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.19 E-value=0.077 Score=52.67 Aligned_cols=86 Identities=17% Similarity=0.187 Sum_probs=56.3
Q ss_pred ccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 76 LQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 76 l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
|+|..+...|+.|.|||...||-- .-++.+...|..++-+-.--.+..+ +.... +...+++|.+|
T Consensus 86 f~~~~l~~vRlrL~PG~~I~~HrD-~~~l~~~~~~~~RlHIPL~Tnp~~~-------------f~vdg-~~~~m~~GE~w 150 (290)
T 1e5r_A 86 FDGTHLQMARSRNLKNAIVIPHRD-FVELDREVDRYFRTFMVLEDSPLAF-------------HSNED-TVIHMRPGEIW 150 (290)
T ss_dssp BCSSSEEEEEEEEEESEEEEEECC-C--------CBCCEEEECSCCTTEE-------------EEETT-EEECCCTTEEE
T ss_pred cccchhheEEEEeCCCCEeeCccC-ccccccccCCceEEEeeEecCCCcE-------------EEECC-EEEecCCCCEE
Confidence 356566788899999999988842 2355556678777776554444332 11111 25799999999
Q ss_pred EeCCCCEEEEEcCCC-CcEEEE
Q 048197 156 ALPTGSANWIYNDGP-SELVVV 176 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~-~~l~~v 176 (480)
++-...+||..|.|+ ..+.+|
T Consensus 151 ~~d~~~~H~v~N~g~~~RIhLv 172 (290)
T 1e5r_A 151 FLDAATVHSAVNFSEISRQSLC 172 (290)
T ss_dssp ECCTTSCEEEEESSSSCCCEEE
T ss_pred EEcCCCeeEEEcCCCCCeEEEE
Confidence 999999999999988 456655
No 210
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=94.12 E-value=0.22 Score=43.47 Aligned_cols=70 Identities=16% Similarity=0.101 Sum_probs=55.4
Q ss_pred cccccccc---c-ccCCceEEEEEEeeEEEEEEecCCc-e--EEeeecCCccEEEECCCcEEEEEcCCCCeEE-EEEEe
Q 048197 355 QNAMMAPH---W-NLNAHSVVYITRGNGRMQIVAENGE-N--VFDGQIREGQLIVVPQGFAVVKRASNRGLEW-ISFKT 425 (480)
Q Consensus 355 pgam~~PH---w-h~nA~ei~yV~~G~grv~vv~~~G~-~--~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~-v~f~t 425 (480)
|.+++.+| . ++-....+-|++|+.++-.++.+|+ . .+ --..+|+..+||++..|.+..-+++++| |.|..
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~-~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc 100 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQV-ILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFV 100 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEE-EEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEE-EEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEe
Confidence 67788899 4 6666788999999999998888776 1 11 1367999999999999999875457887 78874
No 211
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=93.80 E-value=0.41 Score=44.81 Aligned_cols=112 Identities=13% Similarity=0.008 Sum_probs=73.7
Q ss_pred ccccCCCCCCcceecCCceE-EEeCCCChhccccCee----------EEEEEEcCCeeecCcccCCCeEEEEEe-ceEEE
Q 048197 47 IQDLNALEPQQRVESEAGVT-EFWDQNDEQLQCANVA----------VFRHRIQQRGLVVPSYTNTPELFYVVQ-GRGIH 114 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~gvs----------~~r~~i~p~gl~lPh~~~a~el~yV~~-G~g~~ 114 (480)
+..+...+|. ++.-+-|.+ |.|+.+ .|..+|+. .....-.+|.++-.|||.-.++++|++ |+...
T Consensus 18 I~gv~ii~~~-~~~D~RG~f~e~f~~~--~~~~~g~~~~F~~~~i~Q~n~S~s~~GvlRGlH~h~q~Klv~~~~~G~v~d 94 (197)
T 1nxm_A 18 IPGMLEFDIP-VHGDNRGWFKENFQKE--KMLPLGFPESFFAEGKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLG 94 (197)
T ss_dssp STTCEEEECC-EEEETTEEEEEEEEHH--HHTTTTCCGGGGTTCCCEEEEEEEETTBEEEEEECSSCEEEEECSSCCEEE
T ss_pred CCCEEEEECc-eEeeCCcCEEEEechH--HHHHcCCCcccccCceEEEEEEECCCCCcceeeecccceEEEEcCCCEEEE
Confidence 4555566664 466666766 566542 22222211 111223678899999998889999999 99877
Q ss_pred EEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 115 GAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 115 g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
-+|+-+...||- ++ ....|..+-.++||+|++|=+++..+. .+++++
T Consensus 95 V~VDlR~SpTfg---------------~~-~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~ 141 (197)
T 1nxm_A 95 TWVDLREGETFG---------------NT-YQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYL 141 (197)
T ss_dssp EEEECBSSTTTT---------------CE-EEEEECTTEEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred EEEECCCCCCCC---------------eE-EEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEE
Confidence 777665444661 11 135777899999999999999998765 444433
No 212
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=93.72 E-value=0.34 Score=51.35 Aligned_cols=76 Identities=18% Similarity=0.276 Sum_probs=52.6
Q ss_pred Eeeeecccccc--ccccccCCceEEEEEEeeEEEEEEecCC-------------------ceEEeeecCCccEEEECCCc
Q 048197 349 EKGNLYQNAMM--APHWNLNAHSVVYITRGNGRMQIVAENG-------------------ENVFDGQIREGQLIVVPQGF 407 (480)
Q Consensus 349 ~~v~L~pgam~--~PHwh~nA~ei~yV~~G~grv~vv~~~G-------------------~~~f~~~l~~GdV~vVPqg~ 407 (480)
+.+.+.|+|-. .|||-+. +-++.-+.|+=++.+..|.- ...++..|++|||+|||+||
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~ 244 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGF 244 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTC
T ss_pred ceEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCC
Confidence 34567777754 5999543 45666678888999987641 22356689999999999999
Q ss_pred EEEEEcCCC-CeEEEEEEe
Q 048197 408 AVVKRASNR-GLEWISFKT 425 (480)
Q Consensus 408 ~~~~~ag~e-~l~~v~f~t 425 (480)
+|+..+.++ .-.=+.|..
T Consensus 245 ~H~~~s~~~~~SlhlTi~~ 263 (489)
T 4diq_A 245 IHQAECQDGVHSLHLTLST 263 (489)
T ss_dssp EEEEEBCSSCCEEEEEEEE
T ss_pred ceEEEecCCCceEEEeecc
Confidence 999988643 222344444
No 213
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=93.71 E-value=0.54 Score=43.97 Aligned_cols=86 Identities=10% Similarity=0.015 Sum_probs=63.6
Q ss_pred CeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEc-CCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 80 NVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVF-PGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~-pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
.+++.-++..||.-..+|=|. +-.+++|++|......-. |+... ... ..-+...+++|||.++
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~-------------~~l--~~~~~~~l~~G~v~~~ 133 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKS-------------NEM--IKKSERTLRENQCAYI 133 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSC-------------CCC--CEEEEEEECTTCEEEE
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCc-------------ccc--cccceEEeCCCCEEEe
Confidence 477888899999998888776 789999999998887543 22100 000 0112579999999999
Q ss_pred -CCCCEEEEEcCC-CCcEEEEEEee
Q 048197 158 -PTGSANWIYNDG-PSELVVVALVD 180 (480)
Q Consensus 158 -PaG~~h~~~N~G-~~~l~~v~~~d 180 (480)
|++..|.+.|.+ +++.+-|=++-
T Consensus 134 ~~~~giH~V~N~s~~~~avSlHvY~ 158 (200)
T 3eln_A 134 NDSIGLHRVENVSHTEPAVSLHLYS 158 (200)
T ss_dssp CTTTCEEEEECCCSSCCEEEEEEEE
T ss_pred cCCCcEEEEECCCCCCCEEEEEeCC
Confidence 888899999988 67877665553
No 214
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.60 E-value=0.12 Score=47.95 Aligned_cols=87 Identities=13% Similarity=0.151 Sum_probs=52.7
Q ss_pred EEEEEcCCeeecC-cccCCCeEEEEEeceEEEEEEcCCCcc-chhhhhhc--c-c---------ccccccccccceeEee
Q 048197 84 FRHRIQQRGLVVP-SYTNTPELFYVVQGRGIHGAVFPGCPE-TYQESQQR--S-S---------ESQSRSQDQHQKVRQI 149 (480)
Q Consensus 84 ~r~~i~p~gl~lP-h~~~a~el~yV~~G~g~~g~v~pg~~e-tf~~~~~~--~-~---------~~~~~~~d~~qk~~~l 149 (480)
..+-|.+.|-..| ||-...-++.++.|+=+..+.-|.... .|-..... . . ..--++.+.+--...|
T Consensus 126 ~~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred eEEEEeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 3455666655444 554567788999999999998875422 11110000 0 0 0000111112124589
Q ss_pred cCCcEEEeCCCCEEEEEcCCC
Q 048197 150 REGDLVALPTGSANWIYNDGP 170 (480)
Q Consensus 150 ~~GDV~~iPaG~~h~~~N~G~ 170 (480)
++||+++||+|..|.+.|.++
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999854
No 215
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=93.57 E-value=0.27 Score=49.69 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=57.5
Q ss_pred EEEcC-CeeecCcccCCCeEEEEEeceEEEEEE-cCCCcc-chh--hhhhcc-c----cc-cccc---ccccceeEeecC
Q 048197 86 HRIQQ-RGLVVPSYTNTPELFYVVQGRGIHGAV-FPGCPE-TYQ--ESQQRS-S----ES-QSRS---QDQHQKVRQIRE 151 (480)
Q Consensus 86 ~~i~p-~gl~lPh~~~a~el~yV~~G~g~~g~v-~pg~~e-tf~--~~~~~~-~----~~-~~~~---~d~~qk~~~l~~ 151 (480)
+-+.| |+-..|||-..+-++..+.|+=++.+. .|.... .+. ...... . .. ..++ ...+--...|++
T Consensus 145 ~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~p 224 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTP 224 (342)
T ss_dssp EEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECT
T ss_pred EEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECC
Confidence 34455 777888887777777888899888887 554221 111 000000 0 00 0011 112222468999
Q ss_pred CcEEEeCCCCEEEEEcCCCCcEEEEEEe
Q 048197 152 GDLVALPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 152 GDV~~iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
||+++||+|..|+..+.++++-+-|++-
T Consensus 225 GD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 225 GTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 9999999999999999866666666654
No 216
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=93.49 E-value=0.16 Score=51.18 Aligned_cols=67 Identities=10% Similarity=0.277 Sum_probs=49.9
Q ss_pred eeecc-ccccccccccCCceEEEEEEeeEEEEEEecC--------Cc---------------------eEEeeecCCccE
Q 048197 351 GNLYQ-NAMMAPHWNLNAHSVVYITRGNGRMQIVAEN--------GE---------------------NVFDGQIREGQL 400 (480)
Q Consensus 351 v~L~p-gam~~PHwh~nA~ei~yV~~G~grv~vv~~~--------G~---------------------~~f~~~l~~GdV 400 (480)
+.+.+ |+-..+|+.+. +.+..++.|+=++.++.|. |. ..++..|++||+
T Consensus 171 l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 171 FRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 33444 45556799765 6788889999999999773 10 146678999999
Q ss_pred EEECCCcEEEEEcCCCCe
Q 048197 401 IVVPQGFAVVKRASNRGL 418 (480)
Q Consensus 401 ~vVPqg~~~~~~ag~e~l 418 (480)
++||.||.|...+.+..+
T Consensus 250 LyiP~gWwH~v~~l~~si 267 (338)
T 3al5_A 250 LFIPALWFHNVISEEFGV 267 (338)
T ss_dssp EEECTTCEEEEEESSCEE
T ss_pred EEECCCCeEEEeeCCCEE
Confidence 999999999988765433
No 217
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=93.07 E-value=2.3 Score=38.85 Aligned_cols=126 Identities=14% Similarity=0.193 Sum_probs=83.5
Q ss_pred CC-CeEEEEEecCCC-------CcccccceeEEeeeecccccccccccc-CCceEEEEEEeeE-EEEEEecCCc---eEE
Q 048197 325 PR-GGRVTTVNRFNL-------PILRYIQLSAEKGNLYQNAMMAPHWNL-NAHSVVYITRGNG-RMQIVAENGE---NVF 391 (480)
Q Consensus 325 ~~-~G~i~~~~~~~~-------P~L~~l~lsa~~v~L~pgam~~PHwh~-nA~ei~yV~~G~g-rv~vv~~~G~---~~f 391 (480)
|. ||+.+....... ..-+ .-.++-..-|.+|.. =|||- +++|+-|...|.. .+-++.++|. .++
T Consensus 25 PEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~--S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~L 101 (172)
T 3loi_A 25 PASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQP--DPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSIL 101 (172)
T ss_dssp TTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCC--EEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEE
T ss_pred CcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCC--ccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEe
Confidence 45 777776664422 1222 125666677888884 57775 5899999999974 8999999986 234
Q ss_pred eeecCCcc---EEEECCCcEEEEEcCCCCeEEEEEEecC--CCcceeeccccccccCCCHHHHHHHcCCCHHHHHHHH
Q 048197 392 DGQIREGQ---LIVVPQGFAVVKRASNRGLEWISFKTND--VAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLK 464 (480)
Q Consensus 392 ~~~l~~Gd---V~vVPqg~~~~~~ag~e~l~~v~f~ts~--~~~~~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~ 464 (480)
-.++..|+ .++||+|....-.. .+..+|+-.... ....+.|+ +.+-|.+.|---++.+++|-
T Consensus 102 G~d~~~Ge~~pQ~vVP~G~WqaA~~--~~~~LVsctVaPGF~f~dfel~---------~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 102 GNPLEHPEARHQVVVPRRVWFAQEV--DGYCLASVLVAPGFDFKDFSLG---------KREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp SCTTTSTTCBSEEEECTTCEEEEEE--SSEEEEEEEEESCCCGGGCEEC---------CHHHHHHHCGGGHHHHHHTS
T ss_pred CCCcccCCcceEEEECCCEEEEEEe--CCcEEEEEEEcCCccchhcEEc---------CHHHHHHHCchHHHHHHHhc
Confidence 44678898 78999999766444 456777654443 23344554 66677777766666677764
No 218
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=92.28 E-value=1.6 Score=38.57 Aligned_cols=98 Identities=6% Similarity=-0.042 Sum_probs=64.2
Q ss_pred ceecCCceEEEeCC-CChhccccCeeEEEEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhccccc
Q 048197 58 RVESEAGVTEFWDQ-NDEQLQCANVAVFRHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSES 135 (480)
Q Consensus 58 ~~~se~G~~e~~~~-~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~ 135 (480)
.+..+-|.+..... ++-.|....+. .-..+.||..+-+|.|. ..+++++++|+..+-+- -|..+
T Consensus 12 ~i~D~RG~L~~~e~~~~ipf~ikRvy-~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ld-Dg~~~------------ 77 (141)
T 2pa7_A 12 KIIDSRGSLVAIEENKNIPFSIKRVY-YIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILD-DGNII------------ 77 (141)
T ss_dssp EEEETTEEEEEEETTTTSSSCCCEEE-EEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEE-CSSCE------------
T ss_pred cEecCCCcEEEEeccCCCCCCccEEE-EEEecCCCCEECcCcCCCceEEEEEEccEEEEEEE-CCcEE------------
Confidence 46667787766544 33334322221 12335588899999885 78999999999999883 33211
Q ss_pred ccccccccceeEeecCCc-EEEeCCCCEEEEEcCCCCcEEEEEEe
Q 048197 136 QSRSQDQHQKVRQIREGD-LVALPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 136 ~~~~~d~~qk~~~l~~GD-V~~iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
+...|.+.+ .+.||+|+-|-++|-++. .+++.+.
T Consensus 78 ---------~~~~L~~~~~gL~IppgvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 78 ---------QEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp ---------EEEEECCTTEEEEECTTCEEEEECCCTT-CEEEEEE
T ss_pred ---------EEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEEEEC
Confidence 234555544 499999999999998765 4554443
No 219
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=91.59 E-value=1.9 Score=40.44 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=69.4
Q ss_pred ccccCCCCCCcceecCCceE-EEeCCCChhccc-cCee------EEEEEEcCCeeecCcccC----CCeEEEEEeceEEE
Q 048197 47 IQDLNALEPQQRVESEAGVT-EFWDQNDEQLQC-ANVA------VFRHRIQQRGLVVPSYTN----TPELFYVVQGRGIH 114 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~-~gvs------~~r~~i~p~gl~lPh~~~----a~el~yV~~G~g~~ 114 (480)
+..+...+|. ++.-+-|.+ |.|+.+ .|.. .|+. .....-.+|.++--||+. -.++++|++|+...
T Consensus 8 I~gv~ii~p~-~~~D~RG~f~e~~~~~--~f~~~~g~~~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~d 84 (205)
T 1oi6_A 8 VDGAIEFTPR-VFADDRGLLILPYQEE--AFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMD 84 (205)
T ss_dssp STTCEEEECC-CEEETTEEEECSCBHH--HHHHHHSSCCCCCCEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESCEEE
T ss_pred CCCeEEEeCC-eEecCCcCEEEEeehh--hhHhhcCCCCCCEEEEEEEeCCCCeEeeeeccCCCCCCceEEEEeCCEEEE
Confidence 4445556664 566677776 445432 1211 1211 111223578899999985 48999999999877
Q ss_pred EEEcCC-CccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 115 GAVFPG-CPETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 115 g~v~pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
-+|+-. ...||- ++. ...|.+ +..+.||+|++|=++|.++.- +++..
T Consensus 85 V~VDlR~~SpTfG---------------~~~-~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a-~~~y~ 134 (205)
T 1oi6_A 85 IVIDIRVGSPTFG---------------QWD-SVLMDQQDPRAVYLPVGVGHAFVALEDDT-VMSYM 134 (205)
T ss_dssp EEECCCBTCTTTT---------------CEE-EEEECSSSCCEEEECTTCEEEEEECSTTE-EEEEE
T ss_pred EEEECCCCCCCCC---------------eEE-EEEecCCCCCEEEeCCCeeEEEEEccCCe-EEEEe
Confidence 777653 223551 111 235554 579999999999999987764 44443
No 220
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=91.45 E-value=0.57 Score=47.28 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=50.5
Q ss_pred cccccccccccCC-ceEEEEEEeeEEEEEEecCCc--------------------------------------eEEeeec
Q 048197 355 QNAMMAPHWNLNA-HSVVYITRGNGRMQIVAENGE--------------------------------------NVFDGQI 395 (480)
Q Consensus 355 pgam~~PHwh~nA-~ei~yV~~G~grv~vv~~~G~--------------------------------------~~f~~~l 395 (480)
+|+....|+.+.. +.|..++.|+=++.++.|.-. ..+...+
T Consensus 181 ~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~~l 260 (336)
T 3k2o_A 181 PRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQ 260 (336)
T ss_dssp TTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCEEEEE
T ss_pred CCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceEEEEE
Confidence 3566678999875 489999999999999977410 1234578
Q ss_pred CCccEEEECCCcEEEEEcCCCCeEE
Q 048197 396 REGQLIVVPQGFAVVKRASNRGLEW 420 (480)
Q Consensus 396 ~~GdV~vVPqg~~~~~~ag~e~l~~ 420 (480)
++||+++||.|+.|+..+.+..+.+
T Consensus 261 ~pGd~l~iP~gw~H~v~~~~~sisv 285 (336)
T 3k2o_A 261 KPGETVFVPGGWWHVVLNLDTTIAI 285 (336)
T ss_dssp CTTCEEEECTTCEEEEEESSCEEEE
T ss_pred CCCCEEEeCCCCcEEEecCCCeEEE
Confidence 9999999999999998876544433
No 221
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=91.17 E-value=1.3 Score=41.67 Aligned_cols=112 Identities=19% Similarity=0.218 Sum_probs=71.9
Q ss_pred cccccCCCCCCcceecCCceE-EEeCCCChhccccCe--eEEE--EE--EcCCeeecCcccC----CCeEEEEEeceEEE
Q 048197 46 NIQDLNALEPQQRVESEAGVT-EFWDQNDEQLQCANV--AVFR--HR--IQQRGLVVPSYTN----TPELFYVVQGRGIH 114 (480)
Q Consensus 46 ~~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~gv--s~~r--~~--i~p~gl~lPh~~~----a~el~yV~~G~g~~ 114 (480)
.+..+...+|. ++.-+-|.+ |.|..+ .|..+|+ .+.+ .. ..+|.++-.||+. -.++++|++|+...
T Consensus 31 ~I~gv~ii~p~-~~~D~RG~F~E~~~~~--~f~~~gi~~~f~Q~n~S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~D 107 (205)
T 3ryk_A 31 NFTDAKLLEPR-LFGDDRGFFTESYNKK--VLETLGVTHSFVQDNVSYSAEAGTIRGLHFQKNPKAQTKLIQVMQGAIYD 107 (205)
T ss_dssp ETTTEEEEECC-EEEETTEEEEEEEEHH--HHHHTTCCCCCCEEEEEEESSTTBEEEEEEECTTSCCCEEEEEEESEEEE
T ss_pred CCCCEEEEeCC-eEeeCCCCEEEEeehH--HHHHcCCCCCeeEEEEEEeCCCCcEeEeEecCCCCCceEEEEEeCCeEEE
Confidence 45556666775 566666665 667643 2332333 2222 22 3688999999985 47999999999887
Q ss_pred EEEcCCC-ccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEE
Q 048197 115 GAVFPGC-PETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVV 176 (480)
Q Consensus 115 g~v~pg~-~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v 176 (480)
-+|+-.. +.||- ++. ...|.+ +-.++||+|++|=++|.++.-++++
T Consensus 108 V~VDlR~~SpTfg---------------~~~-~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y 156 (205)
T 3ryk_A 108 VIVDLRKDSPTFK---------------QWR-GYILSADNHRQLLVPKGFAHGFCTLVPHTIVMY 156 (205)
T ss_dssp EEEECCTTSTTTT---------------CEE-EEEEETTTCCEEEECTTEEEEEEECSSSEEEEE
T ss_pred EEEECCCCCCCCC---------------eEE-EEEecCCCCCEEEeCCCceEEEEEcCCCEEEEE
Confidence 7776432 23551 111 235554 7899999999999999887644433
No 222
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=91.02 E-value=2.5 Score=38.90 Aligned_cols=112 Identities=17% Similarity=0.101 Sum_probs=69.0
Q ss_pred ccccCCCCCCcceecCCceE-EEeCCCChhcccc-Cee-----EEEEEEcCCeeecCcccC----CCeEEEEEeceEEEE
Q 048197 47 IQDLNALEPQQRVESEAGVT-EFWDQNDEQLQCA-NVA-----VFRHRIQQRGLVVPSYTN----TPELFYVVQGRGIHG 115 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~-gvs-----~~r~~i~p~gl~lPh~~~----a~el~yV~~G~g~~g 115 (480)
+..+...+|. ++.-+-|.+ |.|+... |..+ |+. .....-.+|.++--||+. -.++++|++|+...-
T Consensus 9 i~gv~ii~~~-~~~D~RG~f~e~~~~~~--~~~~~g~~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV 85 (183)
T 1dzr_A 9 IPDVLILEPK-VFGDERGFFFESYNQQT--FEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDV 85 (183)
T ss_dssp STTCEEEECC-EEEETTEEEEEEEEHHH--HHHHHSSCCCCCEEEEEEEETTBEEEEEEECGGGCCCEEEEEEESEEEEE
T ss_pred CCCeEEEeCC-eEecCCcCEEEEeehhh--HHhccCCCCCEEEEEEEeCCCCeeeeeEccCCCCCCcEEEEEeCCeEEEE
Confidence 4445556665 466666766 6676432 1111 111 111122478899999974 479999999998777
Q ss_pred EEcCC-CccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 116 AVFPG-CPETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 116 ~v~pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
+|+-. ...||- ++. ...|.+ +..+.||+|++|=++|.++. .+++.+
T Consensus 86 ~VD~R~~SpTfg---------------~~~-~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (183)
T 1dzr_A 86 AVDIRKESPTFG---------------QWV-GVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLYK 134 (183)
T ss_dssp EEECCTTCTTTT---------------CEE-EEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred EEECCCCCCCCC---------------eEE-EEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEE
Confidence 77653 223551 111 234443 68999999999999998776 344443
No 223
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=90.91 E-value=2.4 Score=39.17 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=70.2
Q ss_pred ccccCCCCCCcceecCCceE-EEeCCCChhccccCee--EEE---EEEcCCeeecCccc--C-CCeEEEEEeceEEEEEE
Q 048197 47 IQDLNALEPQQRVESEAGVT-EFWDQNDEQLQCANVA--VFR---HRIQQRGLVVPSYT--N-TPELFYVVQGRGIHGAV 117 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~gvs--~~r---~~i~p~gl~lPh~~--~-a~el~yV~~G~g~~g~v 117 (480)
+..+...+|. ++.-+-|.+ |.|+.. .|...|+. +.+ ..-.+|.++--||+ . -.++++|++|+...-+|
T Consensus 11 i~gv~ii~~~-~~~D~RG~f~e~~~~~--~~~~~g~~~~f~Q~n~S~s~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~V 87 (185)
T 1ep0_A 11 LDGAIIIEPE-VYTDERGYFMETFNEA--IFQENGLEVRFVQDNESMSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAV 87 (185)
T ss_dssp STTCEEEEEC-EEEETTEEEECCCCHH--HHHHTTCCCCCCEEEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEE
T ss_pred CCCeEEEeCC-eEecCCccEEEEeehh--hHHhcCCCCCEEEEEEEeCcCCeEecceecCCccccEEEEEeCCeEEEEEE
Confidence 4455556664 566677766 445432 22222222 111 12247889999998 4 68999999999877666
Q ss_pred cCC-CccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEEEEe
Q 048197 118 FPG-CPETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 118 ~pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
+-. ...||- ++. ...|.+ +..+.||+|++|=++|.++. .+++...
T Consensus 88 D~R~~SpTfg---------------~~~-~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 135 (185)
T 1ep0_A 88 DLRKNSDTYG---------------EWT-GVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYKC 135 (185)
T ss_dssp ECCTTCTTTT---------------CEE-EEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred ECCCCCCCCC---------------eEE-EEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEec
Confidence 643 223551 111 234543 68999999999999998776 5555443
No 224
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=90.72 E-value=1.8 Score=40.33 Aligned_cols=109 Identities=16% Similarity=0.218 Sum_probs=66.9
Q ss_pred cCCCCCCcceecCCceE-EEeCCCChhccccCee-EEE---EEEcCCeeecCcccCC----CeEEEEEeceEEEEEEcCC
Q 048197 50 LNALEPQQRVESEAGVT-EFWDQNDEQLQCANVA-VFR---HRIQQRGLVVPSYTNT----PELFYVVQGRGIHGAVFPG 120 (480)
Q Consensus 50 L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~gvs-~~r---~~i~p~gl~lPh~~~a----~el~yV~~G~g~~g~v~pg 120 (480)
+...+|. ++.-+-|.+ |.|... .|...|+. +.+ ..-.+|.++--||+.. .++++|++|+...-+|+-.
T Consensus 32 v~ii~p~-~~~D~RG~f~e~~~~~--~f~~~gi~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR 108 (196)
T 1wlt_A 32 IILIKPK-VFPDKRGFFLEVFKSE--DFTKMRIPNVIQTNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVR 108 (196)
T ss_dssp EEEEEEC-CEEETTEEEEEEEEHH--HHHHTTCCCEEEEEEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECB
T ss_pred cEEEeCC-ceecCCcCEEEEEecc--hhhhcCCCCEEEEEEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECC
Confidence 3444453 455566665 566532 22223322 111 1235788999999863 7999999999977777643
Q ss_pred -CccchhhhhhcccccccccccccceeEeec--CCcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 121 -CPETYQESQQRSSESQSRSQDQHQKVRQIR--EGDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 121 -~~etf~~~~~~~~~~~~~~~d~~qk~~~l~--~GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
.+.||- ++. ...|. .+..+.||+|++|=++|.++. .+++..
T Consensus 109 ~~SpTfG---------------~~~-~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ly~ 152 (196)
T 1wlt_A 109 KSSPTFG---------------KYV-KAELNEENHYMLWIPPGFAHGFQALEDS-IVIYFI 152 (196)
T ss_dssp TTSTTTT---------------CEE-EEEEETTTCCEEEECTTEEEEEEESSSE-EEEEEE
T ss_pred CCCCCCC---------------eEE-EEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEE
Confidence 223551 111 23555 478999999999999998775 333433
No 225
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=90.71 E-value=6.3 Score=36.93 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=68.6
Q ss_pred eeEEeeeecccccccccccc-CCceEEEEEEeeEEEEEEecCCc---eEEeeecCCccE--EEECCCcEEEEEcC-CCCe
Q 048197 346 LSAEKGNLYQNAMMAPHWNL-NAHSVVYITRGNGRMQIVAENGE---NVFDGQIREGQL--IVVPQGFAVVKRAS-NRGL 418 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~-nA~ei~yV~~G~grv~vv~~~G~---~~f~~~l~~GdV--~vVPqg~~~~~~ag-~e~l 418 (480)
.++-..-|.++.- -=|||- +++||-|...|.+..-++.++|. .++-.++..|++ ++||+|+...-... +++.
T Consensus 79 ~TaIYfLL~~~~~-~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~ 157 (203)
T 1xe7_A 79 STLIYYLLTPDSP-IGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEF 157 (203)
T ss_dssp CEEEEEEEBTTBC-EEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTT
T ss_pred eeEEEEEEcCCCC-cccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCc
Confidence 3455556777752 236776 59999999999887778888886 234456777874 79999988664321 2222
Q ss_pred ---EEEEEEecC--CCcceeeccccccccCCCHH-HHHHHcCCCHHHHHHHHh
Q 048197 419 ---EWISFKTND--VAKTSQLAGRASVIRGLPLD-VIQNSFQVSRDEAQRLKY 465 (480)
Q Consensus 419 ---~~v~f~ts~--~~~~~~LAG~~svl~~lp~e-Vla~af~vs~e~~~~l~~ 465 (480)
.+|+-.... ....+.|+ +.+ -|.+.|- .+.+++|+.
T Consensus 158 ~~~tLVgCtVaPGFdF~dFel~---------~~~~~L~~~~P--~~~~~~l~~ 199 (203)
T 1xe7_A 158 DNGFLISEVVVPGFDFEDHTFL---------KGEDELKHLVG--PEKAAELAF 199 (203)
T ss_dssp TTCEEEEEEESSCCCGGGEEEC---------CHHHHHHHHHC--HHHHHHTGG
T ss_pred ccceEEEEEecCCccchhcEec---------CCcHHHHHHCC--HHHHHHHHH
Confidence 455544443 23345554 555 6666664 777777753
No 226
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=90.60 E-value=2.6 Score=38.84 Aligned_cols=115 Identities=18% Similarity=0.110 Sum_probs=70.1
Q ss_pred ccccCCCCCCcceecCCceE-EEeCCCC-hhccccC---eeEEEEEEcCCeeecCccc--C-CCeEEEEEeceEEEEEEc
Q 048197 47 IQDLNALEPQQRVESEAGVT-EFWDQND-EQLQCAN---VAVFRHRIQQRGLVVPSYT--N-TPELFYVVQGRGIHGAVF 118 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~-e~~~~~~-~~l~~~g---vs~~r~~i~p~gl~lPh~~--~-a~el~yV~~G~g~~g~v~ 118 (480)
+..+...+|. ++.-+-|.+ |.|+... ....... +-.....-.+|.++--||+ . -.++++|++|+...-+|+
T Consensus 11 i~gv~ii~~~-~~~D~RG~f~e~~~~~~~~~~~g~~~~f~Q~n~S~s~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD 89 (184)
T 2ixk_A 11 IPDVILFEPR-VFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVD 89 (184)
T ss_dssp STTSEEEECC-EEEETTEEEEEEEEHHHHHHHHSSCCCCCEEEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEE
T ss_pred CCCeEEEeCc-eEecCCccEEEEeehhhhHhhcCCCCCEEEEEEEeCCCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEE
Confidence 4455566665 466666766 6666432 1110000 1111112247889999998 4 689999999998766665
Q ss_pred CC-CccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEEEEe
Q 048197 119 PG-CPETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVVALV 179 (480)
Q Consensus 119 pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v~~~ 179 (480)
-. .+.||- ++. ...|.+ +..+.||+|++|=++|.++. .+++.+.
T Consensus 90 ~R~~SpTfg---------------~~~-~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 136 (184)
T 2ixk_A 90 LRRGSPTFG---------------QWV-GERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYKT 136 (184)
T ss_dssp CBTTSTTTT---------------CEE-EEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred CCCCCCCCC---------------eEE-EEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEeC
Confidence 42 233551 111 234443 68999999999999998776 5555443
No 227
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=90.13 E-value=2.5 Score=39.79 Aligned_cols=84 Identities=10% Similarity=0.071 Sum_probs=63.1
Q ss_pred CeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc-CCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 80 NVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF-PGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~-pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.+++.-+...||--..+|=|.+-.++.|++|.-....-. +.... .....+...+.+||+++++
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~----------------~~~~~~~~~l~~G~v~~~~ 135 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGR----------------PHPSGARRRLEPGEVEALS 135 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSC----------------EEECSCCEEECTTCEEEEB
T ss_pred CEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCC----------------cccccceEEecCCCEEEEC
Confidence 577888899999999999888889999999998776632 11100 0011124789999999999
Q ss_pred CC--CEEEEEcC-CCCcEEEEEEe
Q 048197 159 TG--SANWIYND-GPSELVVVALV 179 (480)
Q Consensus 159 aG--~~h~~~N~-G~~~l~~v~~~ 179 (480)
++ ..|-+.|. ++++.+-|=++
T Consensus 136 p~~g~IH~V~N~~~d~~avSLHvY 159 (211)
T 3uss_A 136 PRIGDVHQVSNAFSDRTSISIHVY 159 (211)
T ss_dssp TTTBCCEEEEESCSSSCEEEEEEE
T ss_pred CCCCCEEEEccCCCCCCEEEEEEc
Confidence 87 89999997 57887766555
No 228
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=90.03 E-value=4.1 Score=38.80 Aligned_cols=114 Identities=12% Similarity=0.083 Sum_probs=70.8
Q ss_pred ccccccCCCCCCcceecCCceE-EEeCCCChhccc-cCe--eE---EEEEEcCCeeecCcccC----CCeEEEEEeceEE
Q 048197 45 CNIQDLNALEPQQRVESEAGVT-EFWDQNDEQLQC-ANV--AV---FRHRIQQRGLVVPSYTN----TPELFYVVQGRGI 113 (480)
Q Consensus 45 C~~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~-~gv--s~---~r~~i~p~gl~lPh~~~----a~el~yV~~G~g~ 113 (480)
..+..+...+|. ++.-+-|.+ |.|+.+ .|.. .|+ .+ ....-.+|.++--||+. -.++++|++|+..
T Consensus 26 t~I~gv~ii~p~-~~~D~RG~F~e~~~~~--~~~~~~gi~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~ 102 (225)
T 1upi_A 26 LDVPGAWEITPT-IHVDSRGLFFEWLTDH--GFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVF 102 (225)
T ss_dssp CSSTTEEEEECC-EEEETTEEEECSCCHH--HHHHHHSSCCCCCEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESEEE
T ss_pred cCCCCeEEEeCc-eEecCCcCEEEEeehh--hHHHhcCCCCCeEEEEEEeCCCCeEeeeeccCCCCCcceEEEEeCCeEE
Confidence 345566667775 566777776 445432 2222 122 11 11223578899999986 3799999999987
Q ss_pred EEEEcCC-CccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 114 HGAVFPG-CPETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 114 ~g~v~pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
.-+|+-. .+.||- ++. ...|.+ +..++||+|++|=++|.++.- +++..
T Consensus 103 dV~VDlR~~SpTfG---------------~~~-~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a-~vly~ 153 (225)
T 1upi_A 103 DVVVDIREGSPTFG---------------RWD-SVLLDDQDRRTIYVSEGLAHGFLALQDNS-TVMYL 153 (225)
T ss_dssp EEEECCCBTCTTTT---------------CEE-EEEEETTTCCEEEECTTCEEEEEECSSSE-EEEEE
T ss_pred EEEEECCCCCCCCC---------------cEE-EEEecCCCCcEEEeCCCeeEEEEEcCCCE-EEEEe
Confidence 7777543 122551 111 234544 579999999999999988774 44433
No 229
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=89.77 E-value=1.5 Score=41.04 Aligned_cols=111 Identities=17% Similarity=0.187 Sum_probs=71.2
Q ss_pred ccccCCCCCCcceecCCceE-EEeCCCChhcccc-Ce--eEEE--E-EEcCCeeecCcccC----CCeEEEEEeceEEEE
Q 048197 47 IQDLNALEPQQRVESEAGVT-EFWDQNDEQLQCA-NV--AVFR--H-RIQQRGLVVPSYTN----TPELFYVVQGRGIHG 115 (480)
Q Consensus 47 ~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~~-gv--s~~r--~-~i~p~gl~lPh~~~----a~el~yV~~G~g~~g 115 (480)
|..+...+|. ++.-+-|.+ |.|+.+. |..+ |+ .+.. . .-.+|.++-.||+. -.++++|++|+..--
T Consensus 6 I~gv~ii~p~-~f~D~RG~F~e~~~~~~--f~~~~G~~~~fvQ~n~S~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV 82 (201)
T 4hn1_A 6 IEGAWSQEPV-IHSDHRGRSHEWFRGES--FRQAFGHDFPVAQVNVAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDV 82 (201)
T ss_dssp STTEEEECCC-EEEETTEEEEEEEEHHH--HHHHHSSCCCCCEEEEEEECTTBEEEEEEECSSSCCCEEEEEEESEEEEE
T ss_pred CCCEEEEeCc-eEeeCCcCEEEeeeHHH--HHHhhCCCCCeeEEEEEEcCCCceEEEEecCCCCCceEEEEEeCCeEEEE
Confidence 4455566775 677777776 7787542 3221 22 1111 1 22678899999974 589999999999877
Q ss_pred EEcCC-CccchhhhhhcccccccccccccceeEeec--CCcEEEeCCCCEEEEEcCCCCcEEEE
Q 048197 116 AVFPG-CPETYQESQQRSSESQSRSQDQHQKVRQIR--EGDLVALPTGSANWIYNDGPSELVVV 176 (480)
Q Consensus 116 ~v~pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~--~GDV~~iPaG~~h~~~N~G~~~l~~v 176 (480)
+|+-. .+.||- ++. ...|. .+-.++||+|++|=+++..+.-.+++
T Consensus 83 ~VDlR~~SpTfG---------------~w~-~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y 130 (201)
T 4hn1_A 83 VVDVRIGSPTFG---------------RWE-IVPMDAERNTAVYLTAGLGRAFLSLTDDATLVF 130 (201)
T ss_dssp EECCCBTCTTTT---------------CEE-EEEEETTTCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred EEECCCCCCCCC---------------eEE-EEEecCCCCCEEEeCCcceEEEeecCCCeEEEE
Confidence 77642 123551 111 23444 47899999999999999877544333
No 230
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=89.54 E-value=1.2 Score=44.91 Aligned_cols=93 Identities=15% Similarity=0.083 Sum_probs=56.9
Q ss_pred EEEcC-CeeecCcccCCCeEEEEEeceEEEEEEcCCCcc-chhhhh-----hcc----ccc-cc---ccccccceeEeec
Q 048197 86 HRIQQ-RGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPE-TYQESQ-----QRS----SES-QS---RSQDQHQKVRQIR 150 (480)
Q Consensus 86 ~~i~p-~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~e-tf~~~~-----~~~----~~~-~~---~~~d~~qk~~~l~ 150 (480)
+-|-| |+...+||-..+-+..++.|+=++-+.-|.... .|..+. .++ ... -. ++.+.+--...|+
T Consensus 187 l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 266 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVG 266 (349)
T ss_dssp EEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEEC
T ss_pred EEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEEC
Confidence 45655 456666775567888999999999998776421 111100 000 000 00 1112222346999
Q ss_pred CCcEEEeCCCCEEEEEcCCC-CcEEEEEE
Q 048197 151 EGDLVALPTGSANWIYNDGP-SELVVVAL 178 (480)
Q Consensus 151 ~GDV~~iPaG~~h~~~N~G~-~~l~~v~~ 178 (480)
+||+++||+|..|++.|.++ ..-+.|.+
T Consensus 267 pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 267 PGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp TTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 99999999999999999863 44445544
No 231
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=89.35 E-value=2 Score=45.54 Aligned_cols=87 Identities=14% Similarity=0.186 Sum_probs=48.7
Q ss_pred EEEEcCCee--ecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCE
Q 048197 85 RHRIQQRGL--VVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSA 162 (480)
Q Consensus 85 r~~i~p~gl--~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~ 162 (480)
..-+.|+|- +.|||-+.+-++.-+.|+=+..+..|..+..+ -+......=.......+--...|++||+++||+|..
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~-lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEE-LALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGT-TCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCcccc-CCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 344556553 35888776666666666667776655432210 000000000000001111246899999999999999
Q ss_pred EEEEcCCCCc
Q 048197 163 NWIYNDGPSE 172 (480)
Q Consensus 163 h~~~N~G~~~ 172 (480)
|+..+.+++.
T Consensus 246 H~~~s~~~~~ 255 (489)
T 4diq_A 246 HQAECQDGVH 255 (489)
T ss_dssp EEEEBCSSCC
T ss_pred eEEEecCCCc
Confidence 9999986543
No 232
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=89.22 E-value=4 Score=38.60 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=69.7
Q ss_pred cccccCCCCCCcceecCCceE-EEeCCCChhccc-cCee-----EEEEEEcCCeeecCcccC----CCeEEEEEeceEEE
Q 048197 46 NIQDLNALEPQQRVESEAGVT-EFWDQNDEQLQC-ANVA-----VFRHRIQQRGLVVPSYTN----TPELFYVVQGRGIH 114 (480)
Q Consensus 46 ~~~~L~a~eP~~~~~se~G~~-e~~~~~~~~l~~-~gvs-----~~r~~i~p~gl~lPh~~~----a~el~yV~~G~g~~ 114 (480)
.+..+...+|. ++.-+-|.+ |.|+.+. |.. .|+. .....-.+|.++--||+. -.++++|++|+...
T Consensus 16 ~I~gv~ii~p~-~~~D~RG~F~e~~~~~~--~~~~~gi~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~d 92 (216)
T 2c0z_A 16 GIEGVWEITPE-QRADPRGVFLDWYHVDR--FAEAIGRPLRLAQANLSVSVRGVVRGIHFVDVPPGQAKYVTCVRGAVFD 92 (216)
T ss_dssp SSTTEEEEECE-EEEETTEEEEECCCHHH--HHHHHSSCCCCCEEEEEEEETTBEEEEEEECTTTCCCEEEEEEESEEEE
T ss_pred cCCCeEEEeCC-eEecCCcCEEEEeehhH--HHHhcCCCCCEEEEEEEeCCCCcEEcCEecCCCCCcceEEEEeCCeEEE
Confidence 35555566664 566677776 5565432 211 1211 111122578899999986 48999999999876
Q ss_pred EEEcCC-CccchhhhhhcccccccccccccceeEeecC--CcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 115 GAVFPG-CPETYQESQQRSSESQSRSQDQHQKVRQIRE--GDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 115 g~v~pg-~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~--GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
-+|+-. .+.||- ++. ...|.+ +..+.||+|++|=++|.++.- +++..
T Consensus 93 V~VDlR~~SpTfG---------------~~~-~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a-~~ly~ 142 (216)
T 2c0z_A 93 VVVDLRVGSPTYG---------------CWE-GTRLDDVSRRAVYLSEGIGHGFCAISDEA-TLCYL 142 (216)
T ss_dssp EEEECCBTCTTTT---------------CEE-EEEEETTTCCEEEECTTEEEEEEECSSEE-EEEEE
T ss_pred EEEECCCCCCCCC---------------eEE-EEEecCCCCCEEEeCCCeeEEEEEcCCCe-EEEEe
Confidence 666643 223551 111 234544 579999999999999987764 44433
No 233
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=89.19 E-value=0.99 Score=45.32 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=55.6
Q ss_pred EEEEEcCCe-eecCcccCCCeEEEEEeceEEEEEEcCCCcc-chhhhhhcc----ccc-cc---ccccccceeEeecCCc
Q 048197 84 FRHRIQQRG-LVVPSYTNTPELFYVVQGRGIHGAVFPGCPE-TYQESQQRS----SES-QS---RSQDQHQKVRQIREGD 153 (480)
Q Consensus 84 ~r~~i~p~g-l~lPh~~~a~el~yV~~G~g~~g~v~pg~~e-tf~~~~~~~----~~~-~~---~~~d~~qk~~~l~~GD 153 (480)
..+-|.|.| -..+||-..+-++.++.|+=++-+..|.... .|....... ... -. ++.+.+--...|++||
T Consensus 169 s~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 169 SVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred ceeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 344565544 4555775566788889999999988775432 121110000 000 00 1222222246899999
Q ss_pred EEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 154 LVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 154 V~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
+++||+|..|++.|.++ -+.|.+
T Consensus 249 ~LyiP~gWwH~v~~l~~--sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEEF--GVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESSC--EEEEEE
T ss_pred EEEECCCCeEEEeeCCC--EEEEEE
Confidence 99999999999999853 455553
No 234
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=89.09 E-value=1.2 Score=46.56 Aligned_cols=79 Identities=19% Similarity=0.280 Sum_probs=48.4
Q ss_pred EEEcCCe-ee-cCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEE
Q 048197 86 HRIQQRG-LV-VPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSAN 163 (480)
Q Consensus 86 ~~i~p~g-l~-lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h 163 (480)
+-+.|+| .. .|||-..+-++..+.|+=+..+..|..+ +.. ...-.-..++.+ +--...|++||+++||+|..|
T Consensus 143 ~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~p--l~~--~~s~d~~~~~~~-~~~~~~L~pGD~LYiP~g~~H 217 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVP--LAR--EYSVEAEERIGR-PVHEFMLKPGDLLYFPRGTIH 217 (442)
T ss_dssp EEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSST--TCS--SCEECCTTTSCS-CSEEEEECTTCEEEECTTCEE
T ss_pred eEECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCC--ccc--cCCCCchhhcCC-cceEEEECCCcEEEECCCceE
Confidence 3445555 43 4888767777788889888888766532 100 000000001111 112468999999999999999
Q ss_pred EEEcCC
Q 048197 164 WIYNDG 169 (480)
Q Consensus 164 ~~~N~G 169 (480)
+..+.+
T Consensus 218 ~~~s~~ 223 (442)
T 2xdv_A 218 QADTPA 223 (442)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 999864
No 235
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=88.71 E-value=1.1 Score=46.84 Aligned_cols=74 Identities=11% Similarity=0.258 Sum_probs=54.2
Q ss_pred ccccccccccccCCc-eEEEEEEeeEEEEEEecCC------------------------ceEEeeecCCccEEEECCCcE
Q 048197 354 YQNAMMAPHWNLNAH-SVVYITRGNGRMQIVAENG------------------------ENVFDGQIREGQLIVVPQGFA 408 (480)
Q Consensus 354 ~pgam~~PHwh~nA~-ei~yV~~G~grv~vv~~~G------------------------~~~f~~~l~~GdV~vVPqg~~ 408 (480)
.+|+....|..++.+ .|..|++|+=+.-++.|.- ...+.-.+++||+++||.||.
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 357777789988754 7889999999999987741 012345789999999999999
Q ss_pred EEEEcCCCCeEEE-EEEecC
Q 048197 409 VVKRASNRGLEWI-SFKTND 427 (480)
Q Consensus 409 ~~~~ag~e~l~~v-~f~ts~ 427 (480)
|+..+-++.+.+= -|.+..
T Consensus 319 H~V~nledsIai~~NF~~~~ 338 (447)
T 3kv4_A 319 HAVLTPVDCLAFGGNFLHSL 338 (447)
T ss_dssp EEEEESSCEEEEEEEECCST
T ss_pred EEEecCCCEEEEcccccccc
Confidence 9988875544443 244433
No 236
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=88.55 E-value=1.5 Score=46.01 Aligned_cols=74 Identities=12% Similarity=0.189 Sum_probs=54.4
Q ss_pred cccccccccccCC-ceEEEEEEeeEEEEEEecCCc------------------------eEEeeecCCccEEEECCCcEE
Q 048197 355 QNAMMAPHWNLNA-HSVVYITRGNGRMQIVAENGE------------------------NVFDGQIREGQLIVVPQGFAV 409 (480)
Q Consensus 355 pgam~~PHwh~nA-~ei~yV~~G~grv~vv~~~G~------------------------~~f~~~l~~GdV~vVPqg~~~ 409 (480)
+|+....|+.+.. +.|..++.|+=++-++.|.-. ..+.-.+++||+++||.||.|
T Consensus 205 ~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWwH 284 (451)
T 2yu1_A 205 RGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIH 284 (451)
T ss_dssp TTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCEE
T ss_pred CCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCceE
Confidence 5666677998874 578899999999999987411 234457899999999999999
Q ss_pred EEEcCCCCeEEE-EEEecCC
Q 048197 410 VKRASNRGLEWI-SFKTNDV 428 (480)
Q Consensus 410 ~~~ag~e~l~~v-~f~ts~~ 428 (480)
+..+-++.+.+- -|.+..|
T Consensus 285 ~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 285 AVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEECSSCEEEEEEEECCSSS
T ss_pred EEecCCCeEEEeeeeCCccc
Confidence 998865544443 3544333
No 237
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=88.39 E-value=1 Score=47.71 Aligned_cols=63 Identities=13% Similarity=0.277 Sum_probs=49.6
Q ss_pred ccccccccccccCCc-eEEEEEEeeEEEEEEecCC------------------------ceEEeeecCCccEEEECCCcE
Q 048197 354 YQNAMMAPHWNLNAH-SVVYITRGNGRMQIVAENG------------------------ENVFDGQIREGQLIVVPQGFA 408 (480)
Q Consensus 354 ~pgam~~PHwh~nA~-ei~yV~~G~grv~vv~~~G------------------------~~~f~~~l~~GdV~vVPqg~~ 408 (480)
.+|+....|+.+..+ -|..++.|+=++-++-|.- ...+.-.+++||+++||.||.
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 467788889998754 6889999999999998731 012345789999999999999
Q ss_pred EEEEcCCC
Q 048197 409 VVKRASNR 416 (480)
Q Consensus 409 ~~~~ag~e 416 (480)
|+..+-++
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99877543
No 238
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=88.34 E-value=3 Score=39.23 Aligned_cols=80 Identities=14% Similarity=-0.003 Sum_probs=61.2
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEec--CCceEE---eeecCCccEEEECCC--cEEEEE-cC-C
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAE--NGENVF---DGQIREGQLIVVPQG--FAVVKR-AS-N 415 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~--~G~~~f---~~~l~~GdV~vVPqg--~~~~~~-ag-~ 415 (480)
.+++..+...||--..+|=|. ++-++.|++|+.+.++..- +|...- ...+.+||+.+++.+ ..|-+. ++ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 367788899999999999999 9999999999999998763 343111 136999999999987 788875 44 5
Q ss_pred CCeEEEEEEe
Q 048197 416 RGLEWISFKT 425 (480)
Q Consensus 416 e~l~~v~f~t 425 (480)
+...-|-+..
T Consensus 151 ~~avSLHvYg 160 (211)
T 3uss_A 151 RTSISIHVYG 160 (211)
T ss_dssp SCEEEEEEES
T ss_pred CCEEEEEEcC
Confidence 5555555543
No 239
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=88.31 E-value=0.93 Score=46.40 Aligned_cols=65 Identities=11% Similarity=0.286 Sum_probs=49.9
Q ss_pred ccccccccccccCCc-eEEEEEEeeEEEEEEecCC------------------------ceEEeeecCCccEEEECCCcE
Q 048197 354 YQNAMMAPHWNLNAH-SVVYITRGNGRMQIVAENG------------------------ENVFDGQIREGQLIVVPQGFA 408 (480)
Q Consensus 354 ~pgam~~PHwh~nA~-ei~yV~~G~grv~vv~~~G------------------------~~~f~~~l~~GdV~vVPqg~~ 408 (480)
.+|+....|+.++.+ -|..+++|+=++-++-|.- ...+.-.+++||+++||.||.
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 367777889998865 5788999999998887631 022445789999999999999
Q ss_pred EEEEcCCCCe
Q 048197 409 VVKRASNRGL 418 (480)
Q Consensus 409 ~~~~ag~e~l 418 (480)
|+..+-++.+
T Consensus 235 H~V~nledSI 244 (371)
T 3k3o_A 235 HAVLTPVDCL 244 (371)
T ss_dssp EEEEEEEEEE
T ss_pred EEEecCCCeE
Confidence 9987754333
No 240
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=87.74 E-value=2.5 Score=39.39 Aligned_cols=80 Identities=21% Similarity=0.311 Sum_probs=57.1
Q ss_pred eEEEEEEcCCeeecCcccCC-CeEEEEEeceEEEEEEcCC--CccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 82 AVFRHRIQQRGLVVPSYTNT-PELFYVVQGRGIHGAVFPG--CPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 82 s~~r~~i~p~gl~lPh~~~a-~el~yV~~G~g~~g~v~pg--~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.+....|.||+...||.-.. ..+ +.-+|++.|. |. + +-.+ ..+..++|.++++-
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~l------R~HL~L~~p~~~~~--i------------~V~~---~~~~w~eGe~~~fD 159 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRL------RMHLGLVIPKEGCK--I------------RCAN---ETKTWEEGKVLIFD 159 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEE------EEEEEEECCSSSEE--E------------EETT---EEECCCBTCEEEEC
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeE------EEEEEEEeCCCCcE--E------------EECC---EEEEeeCCcEEEEc
Confidence 46778999999999998643 222 5567888775 31 1 0011 25799999999999
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCCCC
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGNSD 185 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n~~ 185 (480)
.-..|+.+|+++++=+++ ++|.-.+.
T Consensus 160 ds~~Hev~N~~d~~RvvL-~~D~~rPd 185 (197)
T 3rcq_A 160 DSFEHEVWQDASSFRLIF-IVDVWHPE 185 (197)
T ss_dssp TTSCEEEEECSSSCEEEE-EEEEECTT
T ss_pred CCeEEEEEECCCCCEEEE-EEeeeCCC
Confidence 999999999998754433 46776654
No 241
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=87.62 E-value=1.3 Score=46.35 Aligned_cols=101 Identities=14% Similarity=0.095 Sum_probs=57.0
Q ss_pred EEEEcCCeeec-Cccc--CCCeEEEEEeceEEEEEEcCCCcc--chhhhhhccccccc-ccc---cccceeEeecCCcEE
Q 048197 85 RHRIQQRGLVV-PSYT--NTPELFYVVQGRGIHGAVFPGCPE--TYQESQQRSSESQS-RSQ---DQHQKVRQIREGDLV 155 (480)
Q Consensus 85 r~~i~p~gl~l-Ph~~--~a~el~yV~~G~g~~g~v~pg~~e--tf~~~~~~~~~~~~-~~~---d~~qk~~~l~~GDV~ 155 (480)
.+-|.|.|-.- .|+- .+.-|..|+.|+=+.-++-|.... .|+.-..... +.. -+. +... .-.+++||++
T Consensus 234 ~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~-~~~~~~~~~~~~~~-~v~l~pGetl 311 (447)
T 3kv4_A 234 YCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSN-QNEMFFGDQVDKCY-KCSVKQGQTL 311 (447)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSS-GGGSCGGGGSSCCE-EEEEETTCEE
T ss_pred EEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcc-hhhhhccccccceE-EEEECCCcEE
Confidence 35566655444 4442 255688999999999877665321 1221110000 000 011 1112 3589999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEeeCCCCCcc
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVDVGNSDNQ 187 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nq 187 (480)
+||+|..|+++|..++=.+--.+++..|-..|
T Consensus 312 fIPsGWwH~V~nledsIai~~NF~~~~nl~~~ 343 (447)
T 3kv4_A 312 FIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQ 343 (447)
T ss_dssp EECTTCEEEEEESSCEEEEEEEECCSTTHHHH
T ss_pred ecCCCCeEEEecCCCEEEEccccccccCHHHH
Confidence 99999999999985542222234444443333
No 242
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=87.59 E-value=4.7 Score=38.99 Aligned_cols=71 Identities=15% Similarity=0.061 Sum_probs=52.2
Q ss_pred EEEEEcCCeeecCcccCC-CeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCC--
Q 048197 84 FRHRIQQRGLVVPSYTNT-PELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTG-- 160 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a-~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG-- 160 (480)
...++.|+.=+.||=|.- ..+.||++|+..-.-. -|+ ...+++|||-++.||
T Consensus 67 n~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS-~Gn------------------------~~~i~~GdvQ~MtAG~G 121 (256)
T 2vec_A 67 NQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDS-EGN------------------------HVQASAGEALLLSTQPG 121 (256)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEEESEEEEEET-TSC------------------------EEEEETTEEEEECCCTT
T ss_pred cccccCCCCccCCcCCCCcEEEEEEEeeEEEEEeC-CCC------------------------EEEECCCeEEEEECCCC
Confidence 345788886667777764 5578999999766531 121 468999999999775
Q ss_pred CEEEEEcCC-CCcEEEEEEe
Q 048197 161 SANWIYNDG-PSELVVVALV 179 (480)
Q Consensus 161 ~~h~~~N~G-~~~l~~v~~~ 179 (480)
+.|.-+|.. ++++..+-+.
T Consensus 122 I~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 122 VSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp CCEEEEECCSSSCEEEEEEE
T ss_pred eEEEEEECCCCceEEEEEEE
Confidence 799999964 4788888764
No 243
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=87.46 E-value=2.4 Score=42.70 Aligned_cols=100 Identities=12% Similarity=0.037 Sum_probs=57.9
Q ss_pred EEEEEcCCe-eecCcccC--CCeEEEEEeceEEEEEEcCCCcc-chhhhhhccc---ccc-----cc---cc------cc
Q 048197 84 FRHRIQQRG-LVVPSYTN--TPELFYVVQGRGIHGAVFPGCPE-TYQESQQRSS---ESQ-----SR---SQ------DQ 142 (480)
Q Consensus 84 ~r~~i~p~g-l~lPh~~~--a~el~yV~~G~g~~g~v~pg~~e-tf~~~~~~~~---~~~-----~~---~~------d~ 142 (480)
..+-|.+.| ....|+.. ..-+..++.|+=++-+.-|..+. .|.-+...++ ... .. +. +.
T Consensus 174 ~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~ 253 (336)
T 3k2o_A 174 RWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEF 253 (336)
T ss_dssp EEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGG
T ss_pred eEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccC
Confidence 345666654 44455543 34699999999999998887542 2321111000 000 00 00 11
Q ss_pred cceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCC
Q 048197 143 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGN 183 (480)
Q Consensus 143 ~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n 183 (480)
+--...+++||+++||+|..|+++|.+++=.+-+.+.+..|
T Consensus 254 ~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~n 294 (336)
T 3k2o_A 254 KPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 294 (336)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTT
T ss_pred ceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCccc
Confidence 11135899999999999999999998764333333444444
No 244
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=87.33 E-value=2.7 Score=44.11 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=34.6
Q ss_pred eeeeccccccccccccCC-ceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEE
Q 048197 350 KGNLYQNAMMAPHWNLNA-HSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAV 409 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA-~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~ 409 (480)
|-...+++++.|.||.|. +|+++.+.|.-.. +. ..+.+|.+-.=|.+.+|
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a-------k~---~Gf~pGg~SLH~~~~pH 397 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA-------KQ---GGFLPGGGSLHSTMTPH 397 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC------------------CCTTCEEEECTTCCB
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc-------cc---cCcCCCceeccCCCcCC
Confidence 336789999999999995 5799999997331 10 13677887777877776
No 245
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=87.24 E-value=0.98 Score=46.63 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=58.4
Q ss_pred EEEEcCCeeecC-ccc--CCCeEEEEEeceEEEEEEcCCCc--cchhhhhhccccccccc---ccccceeEeecCCcEEE
Q 048197 85 RHRIQQRGLVVP-SYT--NTPELFYVVQGRGIHGAVFPGCP--ETYQESQQRSSESQSRS---QDQHQKVRQIREGDLVA 156 (480)
Q Consensus 85 r~~i~p~gl~lP-h~~--~a~el~yV~~G~g~~g~v~pg~~--etf~~~~~~~~~~~~~~---~d~~qk~~~l~~GDV~~ 156 (480)
.+-|.|.|-.-| |+. .+.-|..++.|+=+.-+.-|+.. ..|.+-.........-+ .+... ...+++||+++
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~-~v~l~pGe~lf 256 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCY-KCVVKQGHTLF 256 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCE-EEEEETTCEEE
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceE-EEEECCCCEEE
Confidence 456667554444 553 25568899999999988877642 22321110000000001 12222 34899999999
Q ss_pred eCCCCEEEEEcCCCCcEEEE--EEeeCCCCCccc
Q 048197 157 LPTGSANWIYNDGPSELVVV--ALVDVGNSDNQL 188 (480)
Q Consensus 157 iPaG~~h~~~N~G~~~l~~v--~~~d~~n~~nql 188 (480)
||+|..|+++|..+ -++| .+++..|-..||
T Consensus 257 IPsGW~H~V~nled--SIai~~NFl~~~nl~~~l 288 (397)
T 3kv9_A 257 VPTGWIHAVLTSQD--CMAFGGNFLHNLNIGMQL 288 (397)
T ss_dssp ECTTCEEEEEEEEE--EEEEEEEECCSTTHHHHH
T ss_pred eCCCCeEEccCCcC--eEEECCcccCchhHHHHH
Confidence 99999999999744 3333 344444444343
No 246
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=87.09 E-value=13 Score=35.27 Aligned_cols=129 Identities=12% Similarity=0.176 Sum_probs=83.0
Q ss_pred CCCeEEEEEecCCCC------cccccceeEEeeeecccccccccccc-CCceEEEEEEeeE-EEEEEecCCc--------
Q 048197 325 PRGGRVTTVNRFNLP------ILRYIQLSAEKGNLYQNAMMAPHWNL-NAHSVVYITRGNG-RMQIVAENGE-------- 388 (480)
Q Consensus 325 ~~~G~i~~~~~~~~P------~L~~l~lsa~~v~L~pgam~~PHwh~-nA~ei~yV~~G~g-rv~vv~~~G~-------- 388 (480)
++||+.++....... .-+ .-.++-..-|.+|.. =|||- +++|+-|...|.. .+-++.++|.
T Consensus 34 PEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~ 110 (225)
T 3m3i_A 34 PEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQ 110 (225)
T ss_dssp TTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC----
T ss_pred CCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCccccccccc
Confidence 578888877654432 111 124566667888885 58886 5889999999985 7889998881
Q ss_pred -------------------e----EEeeecCCcc--EEEECCCcEEEEE-cCCC-----CeEEEEEEecC--CCcceeec
Q 048197 389 -------------------N----VFDGQIREGQ--LIVVPQGFAVVKR-ASNR-----GLEWISFKTND--VAKTSQLA 435 (480)
Q Consensus 389 -------------------~----~f~~~l~~Gd--V~vVPqg~~~~~~-ag~e-----~l~~v~f~ts~--~~~~~~LA 435 (480)
. ++-.++.+|+ .++||.|....-. .+++ +..+|+-..+. ....+.|+
T Consensus 111 ~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtVaPGFdF~DFel~ 190 (225)
T 3m3i_A 111 PPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIVSPGFDYRDFEIF 190 (225)
T ss_dssp --------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEEESCCCGGGCEEC
T ss_pred ccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEEcCCccchhcEec
Confidence 1 2334567787 5699999986643 3322 56666544443 22344453
Q ss_pred cccccccCCCHHHHHHHcCCCHHHHHHHHh
Q 048197 436 GRASVIRGLPLDVIQNSFQVSRDEAQRLKY 465 (480)
Q Consensus 436 G~~svl~~lp~eVla~af~vs~e~~~~l~~ 465 (480)
+.+-|.+.|---++.+++|-.
T Consensus 191 ---------~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 191 ---------TQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp ---------BHHHHHHHCGGGHHHHHHHSB
T ss_pred ---------CHHHHHHHCchHHHHHHHhch
Confidence 566677777666677777754
No 247
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=87.09 E-value=1.3 Score=45.78 Aligned_cols=66 Identities=12% Similarity=0.239 Sum_probs=49.5
Q ss_pred eeec-cccccccccccCCc-eEEEEEEeeEEEEEEecCC------------------------ceEEeeecCCccEEEEC
Q 048197 351 GNLY-QNAMMAPHWNLNAH-SVVYITRGNGRMQIVAENG------------------------ENVFDGQIREGQLIVVP 404 (480)
Q Consensus 351 v~L~-pgam~~PHwh~nA~-ei~yV~~G~grv~vv~~~G------------------------~~~f~~~l~~GdV~vVP 404 (480)
+-+. +|+....|+.++.+ -|..++.|+=++-++.|.- ...+...+++||+++||
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 4444 45666669999854 6889999999999998741 01234578999999999
Q ss_pred CCcEEEEEcCCC
Q 048197 405 QGFAVVKRASNR 416 (480)
Q Consensus 405 qg~~~~~~ag~e 416 (480)
.||.|+..+-++
T Consensus 259 sGW~H~V~nled 270 (397)
T 3kv9_A 259 TGWIHAVLTSQD 270 (397)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEccCCcC
Confidence 999999876533
No 248
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=86.79 E-value=1.9 Score=42.01 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=55.0
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
.|-+-.++.+.|+=-+.|-.+.|+.-+||++|+..+| -.++.+|+-+++|
T Consensus 89 ~GaSTl~V~fpp~~~~P~Gi~~ad~E~fVL~G~i~~G------------------------------~~~l~~h~Y~f~P 138 (303)
T 2qdr_A 89 SGASTSRVVLPPKFEAPSGIFTADLEIFVIKGAIQLG------------------------------EWQLNKHSYSFIP 138 (303)
T ss_dssp TSCEEEEEEECTTCEECCBEESSCEEEEEEESEEEET------------------------------TEEECTTEEEEEC
T ss_pred CCcceEEEEecCCCCCCCcccccceEEEEEEeEEEeC------------------------------CEEecCCceEEec
Confidence 3777888888888777777888888899999998886 1689999999999
Q ss_pred CCCE--EEEEcCCCCcEEEEEEe
Q 048197 159 TGSA--NWIYNDGPSELVVVALV 179 (480)
Q Consensus 159 aG~~--h~~~N~G~~~l~~v~~~ 179 (480)
+|+. -|- -.|+++..++-+-
T Consensus 139 aGV~~~~~k-v~~~~g~~iL~fe 160 (303)
T 2qdr_A 139 AGVRIGSWK-VLGGEEAEILWME 160 (303)
T ss_dssp TTCCBCCEE-EETTSCEEEEEEE
T ss_pred CCCccCcee-ecCCCCcEEEEEe
Confidence 9983 333 2467777777653
No 249
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=86.44 E-value=1.2 Score=46.83 Aligned_cols=104 Identities=15% Similarity=0.155 Sum_probs=61.0
Q ss_pred EEEEcCCeeecCcccC---CCeEEEEEeceEEEEEEcCCCcc--chhhhhhcccccccccccc--cceeEeecCCcEEEe
Q 048197 85 RHRIQQRGLVVPSYTN---TPELFYVVQGRGIHGAVFPGCPE--TYQESQQRSSESQSRSQDQ--HQKVRQIREGDLVAL 157 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~---a~el~yV~~G~g~~g~v~pg~~e--tf~~~~~~~~~~~~~~~d~--~qk~~~l~~GDV~~i 157 (480)
.+-|-|.|-.-|-|.+ +.-|..++.|+=+.-++-|+... .|..-.....+...-+.+. +-..-.+++||+++|
T Consensus 199 ~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfI 278 (451)
T 2yu1_A 199 YCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVI 278 (451)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEE
T ss_pred EEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEe
Confidence 4567776655555543 45788999999999998886432 1221100000000001111 112458999999999
Q ss_pred CCCCEEEEEcCCCCcEEEEEEeeCCCCCccc
Q 048197 158 PTGSANWIYNDGPSELVVVALVDVGNSDNQL 188 (480)
Q Consensus 158 PaG~~h~~~N~G~~~l~~v~~~d~~n~~nql 188 (480)
|+|.-|.++|..++=.+-..+++..|-..||
T Consensus 279 PsGWwH~V~nledsIait~NF~~~~nl~~~l 309 (451)
T 2yu1_A 279 PSGWIHAVYTPTDTLVFGGNFLHSFNIPMQL 309 (451)
T ss_dssp CTTCEEEEECSSCEEEEEEEECCSSSHHHHH
T ss_pred CCCceEEEecCCCeEEEeeeeCCcccHHHHH
Confidence 9999999999865433333455555544443
No 250
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=86.44 E-value=1.2 Score=45.91 Aligned_cols=85 Identities=12% Similarity=0.113 Sum_probs=51.0
Q ss_pred EEEEcCCeeecCcccC---CCeEEEEEeceEEEEEEcCCCcc--chhhhhhccccccc-ccc---cccceeEeecCCcEE
Q 048197 85 RHRIQQRGLVVPSYTN---TPELFYVVQGRGIHGAVFPGCPE--TYQESQQRSSESQS-RSQ---DQHQKVRQIREGDLV 155 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~---a~el~yV~~G~g~~g~v~pg~~e--tf~~~~~~~~~~~~-~~~---d~~qk~~~l~~GDV~ 155 (480)
.+-|-|.|-.-+-|.+ +.-|..|++|+=+.-++-|+... .|++-..+.. +.. -+. +... .-.+++||++
T Consensus 177 ~~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~-~~e~~~~~~~~~~~-ev~l~pGEtl 254 (392)
T 3pua_A 177 YCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASN-HSEMFFADQVDKCY-KCIVKQGQTL 254 (392)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTT-GGGSCGGGGSSCCE-EEEEETTCEE
T ss_pred EEEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcc-hhhhhhcccccceE-EEEECCCcEE
Confidence 3556665544444432 56789999999999777675422 1221110000 000 111 1222 3589999999
Q ss_pred EeCCCCEEEEEcCCCC
Q 048197 156 ALPTGSANWIYNDGPS 171 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~ 171 (480)
+||+|..|+++|..++
T Consensus 255 fIPsGWwH~V~nledS 270 (392)
T 3pua_A 255 FIPSGWIYATLTPVDC 270 (392)
T ss_dssp EECTTCEEEEEEEEEE
T ss_pred eeCCCceEEEecCCCE
Confidence 9999999999997543
No 251
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=85.96 E-value=0.97 Score=46.57 Aligned_cols=67 Identities=10% Similarity=0.284 Sum_probs=50.8
Q ss_pred ccccccccccccCC-ceEEEEEEeeEEEEEEecCCc------------------------eEEeeecCCccEEEECCCcE
Q 048197 354 YQNAMMAPHWNLNA-HSVVYITRGNGRMQIVAENGE------------------------NVFDGQIREGQLIVVPQGFA 408 (480)
Q Consensus 354 ~pgam~~PHwh~nA-~ei~yV~~G~grv~vv~~~G~------------------------~~f~~~l~~GdV~vVPqg~~ 408 (480)
.+|+....|..++. +.|..+++|+=+.-++.|.-. .-+.-.+++||+++||.||.
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 36777788998875 578899999999988877310 12445789999999999999
Q ss_pred EEEEcCCCCeEE
Q 048197 409 VVKRASNRGLEW 420 (480)
Q Consensus 409 ~~~~ag~e~l~~ 420 (480)
|+..+..+.+.+
T Consensus 262 H~V~nledSIai 273 (392)
T 3pua_A 262 YATLTPVDCLAF 273 (392)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEecCCCEEEE
Confidence 998775443333
No 252
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=85.87 E-value=1.2 Score=47.34 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=56.4
Q ss_pred EEEEcCCe-eecCccc--CCCeEEEEEeceEEEEEEcCCCc--cchhhhhhcccccccc-cc---cccceeEeecCCcEE
Q 048197 85 RHRIQQRG-LVVPSYT--NTPELFYVVQGRGIHGAVFPGCP--ETYQESQQRSSESQSR-SQ---DQHQKVRQIREGDLV 155 (480)
Q Consensus 85 r~~i~p~g-l~lPh~~--~a~el~yV~~G~g~~g~v~pg~~--etf~~~~~~~~~~~~~-~~---d~~qk~~~l~~GDV~ 155 (480)
.+-|.|.| ..-.|+. ...-|..|+.|+=+.-+.-|+.. ..|.+-..... +... +. +... ...+++||++
T Consensus 269 ~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~-~~~l~pGe~l 346 (488)
T 3kv5_D 269 YCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVT-QSEVFFGDKVDKCY-KCVVKQGHTL 346 (488)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSS-GGGSCGGGSSSCCE-EEEEETTCEE
T ss_pred EEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCc-cchhhhcccccceE-EEeeCCCCEE
Confidence 35566655 4444443 24568899999999988877532 12321110000 0000 11 1222 3589999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEE--EEeeCCCCCcc
Q 048197 156 ALPTGSANWIYNDGPSELVVV--ALVDVGNSDNQ 187 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v--~~~d~~n~~nq 187 (480)
+||+|..|+++|..+ -++| .+++..|-..|
T Consensus 347 fIPsGWwH~V~nled--sIai~~NF~~~~nl~~~ 378 (488)
T 3kv5_D 347 FVPTGWIHAVLTSQD--CMAFGGNFLHNLNIGMQ 378 (488)
T ss_dssp EECTTCEEEEEEEEE--EEEEEEEECCSTTHHHH
T ss_pred EeCCCceEEeeCCCC--eEEEccccCCccCHHHH
Confidence 999999999999744 3333 34444443333
No 253
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=85.40 E-value=2.6 Score=43.12 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=50.8
Q ss_pred EEEEcCCeeecCcccC---CCeEEEEEeceEEEEEEcCCCcc--chhhhhhcccccccccc---cccceeEeecCCcEEE
Q 048197 85 RHRIQQRGLVVPSYTN---TPELFYVVQGRGIHGAVFPGCPE--TYQESQQRSSESQSRSQ---DQHQKVRQIREGDLVA 156 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~---a~el~yV~~G~g~~g~v~pg~~e--tf~~~~~~~~~~~~~~~---d~~qk~~~l~~GDV~~ 156 (480)
.+-|.|.|-.-|-|.+ +.-|..++.|+=+.-+.-|+... .|..-..+......-+. +... .-.+++||+++
T Consensus 150 ~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~-ev~l~pGEtLf 228 (371)
T 3k3o_A 150 YCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCY-KCSVKQGQTLF 228 (371)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCE-EEEEETTCEEE
T ss_pred EEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceE-EEEECCCcEEE
Confidence 4566665544444432 45688999999999888776431 23221110000000011 1122 35899999999
Q ss_pred eCCCCEEEEEcCCC
Q 048197 157 LPTGSANWIYNDGP 170 (480)
Q Consensus 157 iPaG~~h~~~N~G~ 170 (480)
||+|..|+++|..+
T Consensus 229 IPsGWwH~V~nled 242 (371)
T 3k3o_A 229 IPTGWIHAVLTPVD 242 (371)
T ss_dssp ECTTCEEEEEEEEE
T ss_pred eCCCCeEEEecCCC
Confidence 99999999999744
No 254
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=83.75 E-value=24 Score=31.57 Aligned_cols=99 Identities=18% Similarity=0.155 Sum_probs=66.2
Q ss_pred CCCeEEEEEecCCCCcccccceeEEeeeeccccccccccccC--CceEEEEEEee-EEEEEEecCCc---eEEeeecCCc
Q 048197 325 PRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLN--AHSVVYITRGN-GRMQIVAENGE---NVFDGQIREG 398 (480)
Q Consensus 325 ~~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~n--A~ei~yV~~G~-grv~vv~~~G~---~~f~~~l~~G 398 (480)
|+||+.++.-......-+. -.++-..-|.++.. =|||-. |+|+-|...|. ..+.++.++|. .++-.++..|
T Consensus 20 PEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~--S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~G 96 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVR--SHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEG 96 (154)
T ss_dssp TTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCC--EEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTT
T ss_pred CCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCC--CcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccC
Confidence 5788888776543222222 24555566777775 577765 99999999997 67778888875 3444577888
Q ss_pred cE--EEECCCcEEEEEcCCCCeEEEEEEecC
Q 048197 399 QL--IVVPQGFAVVKRASNRGLEWISFKTND 427 (480)
Q Consensus 399 dV--~vVPqg~~~~~~ag~e~l~~v~f~ts~ 427 (480)
++ ++||+|....-... .+..+|+-....
T Consensus 97 e~pQ~vVP~G~WqaA~~~-g~~~LVsCtVaP 126 (154)
T 1znp_A 97 ERPQVIVPANCWQSAESL-GDFTLVGCTVSP 126 (154)
T ss_dssp EESEEEECTTCEEEEEES-SSEEEEEEEESS
T ss_pred cccEEEEcCCEEEEeeEC-CCeEEEEEEecC
Confidence 86 89999988665332 356666554443
No 255
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=83.27 E-value=5.5 Score=41.54 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=49.2
Q ss_pred ceEEEeCCCChhccccCeeEEEEEEc--CCe-eecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccc
Q 048197 64 GVTEFWDQNDEQLQCANVAVFRHRIQ--QRG-LVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQ 140 (480)
Q Consensus 64 G~~e~~~~~~~~l~~~gvs~~r~~i~--p~g-l~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~ 140 (480)
+.+..+++-.+ ..++.++++. +++ ..++ -.+.+.++.|++|+|.+.. .++..
T Consensus 345 ~~~~~y~~P~~-----eF~v~~~~~~~~~~~~~~~~-~~~~~~illv~~G~g~i~~--~~~~~----------------- 399 (440)
T 1pmi_A 345 VKSVLYDPPIA-----EFSVLQTIFDKSKGGKQVIE-GLNGPSIVIATNGKGTIQI--TGDDS----------------- 399 (440)
T ss_dssp SEEEEECCSSS-----SCEEEEEECCTTTCCEEEEC-CCSSCEEEEEEESEEEEEE--TTCGG-----------------
T ss_pred cceEEECCCCC-----eEEEEEEEecCCCCceeEEe-cCCCcEEEEEEeCeEEEEe--CCccc-----------------
Confidence 34555654323 4567778887 442 3322 2357899999999999875 11100
Q ss_pred cccceeEeecCCcEEEeCCCCEEEEEcC
Q 048197 141 DQHQKVRQIREGDLVALPTGSANWIYND 168 (480)
Q Consensus 141 d~~qk~~~l~~GDV~~iPaG~~h~~~N~ 168 (480)
....|++||+++||++....+.+.
T Consensus 400 ----~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 400 ----TKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp ----GCEEEETTCEEEECTTCCEEEEEC
T ss_pred ----ceEEeccCCEEEEeCCCcEEEEEe
Confidence 014899999999999966666665
No 256
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=83.00 E-value=6.9 Score=38.17 Aligned_cols=73 Identities=12% Similarity=0.196 Sum_probs=51.9
Q ss_pred ccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC-C----cEEEEEcCCCC
Q 048197 343 YIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ-G----FAVVKRASNRG 417 (480)
Q Consensus 343 ~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq-g----~~~~~~ag~e~ 417 (480)
...+.+..+.|.+|+-..-...+.-.-++||++|++.+ +|.. ..|.+||.+++-. + -...+.|. ++
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v-----~g~~---~~l~~~d~~~~~~~~~~~~~~l~l~a~-~~ 234 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF-----GADN---IEGKAGQALFFSRHNRGEETELNVTAR-EK 234 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE-----TTTT---EEEETTEEEEECCCCTTCEEEEEEEES-SS
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE-----CCCc---eEeCCCcEEEEcCCCCCccceEEEEeC-CC
Confidence 34688888999999988655544456899999999766 2321 2488999999985 6 44555554 46
Q ss_pred eEEEEEE
Q 048197 418 LEWISFK 424 (480)
Q Consensus 418 l~~v~f~ 424 (480)
.+++-|.
T Consensus 235 a~~Ll~~ 241 (277)
T 2p17_A 235 LRLLLYA 241 (277)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 7777665
No 257
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=82.78 E-value=3.3 Score=40.55 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=46.7
Q ss_pred ceeEEeeeecccccc---ccccccCC--c------eEEEE-EE---eeEEEEEEecCCceEEeeecCCccEEEECCCcEE
Q 048197 345 QLSAEKGNLYQNAMM---APHWNLNA--H------SVVYI-TR---GNGRMQIVAENGENVFDGQIREGQLIVVPQGFAV 409 (480)
Q Consensus 345 ~lsa~~v~L~pgam~---~PHwh~nA--~------ei~yV-~~---G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~ 409 (480)
.|-|..+ |+|+|.- .||-|... . |+-|. +. |-+.--|..++|.---...|+-||+++||.|+ |
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-H 229 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-H 229 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-C
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-C
Confidence 3666666 8899988 99999875 4 88776 43 44554454554431112379999999999999 7
Q ss_pred EEEc
Q 048197 410 VKRA 413 (480)
Q Consensus 410 ~~~a 413 (480)
-..+
T Consensus 230 p~~a 233 (270)
T 2qjv_A 230 PVAT 233 (270)
T ss_dssp CEEE
T ss_pred CCcC
Confidence 7554
No 258
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=81.19 E-value=2.9 Score=44.51 Aligned_cols=85 Identities=16% Similarity=0.194 Sum_probs=50.3
Q ss_pred EEEcCCe-eecCccc--CCCeEEEEEeceEEEEEEcCCCcc--chhhhhhcccccccccccccc---eeEeecCCcEEEe
Q 048197 86 HRIQQRG-LVVPSYT--NTPELFYVVQGRGIHGAVFPGCPE--TYQESQQRSSESQSRSQDQHQ---KVRQIREGDLVAL 157 (480)
Q Consensus 86 ~~i~p~g-l~lPh~~--~a~el~yV~~G~g~~g~v~pg~~e--tf~~~~~~~~~~~~~~~d~~q---k~~~l~~GDV~~i 157 (480)
+-+-|.| ..-.|+- .+.-|++|++|+=+.=++-|+... .|+.-..+.. ...-+.|... +.-.+++||+++|
T Consensus 300 ~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~-~~~wfgd~l~~~~~~v~l~pGEtlfI 378 (528)
T 3pur_A 300 CLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPD-TTTWFGDIANGAVKRVVIKEGQTLLI 378 (528)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSC-CSCCGGGGTTTCCEEEEEETTCEEEE
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCc-hhhhhcccccccEEEEEECCCCEEEe
Confidence 4555544 4455553 256789999999999766665321 1221111100 0111222211 2358999999999
Q ss_pred CCCCEEEEEcCCCC
Q 048197 158 PTGSANWIYNDGPS 171 (480)
Q Consensus 158 PaG~~h~~~N~G~~ 171 (480)
|+|..|+++|..|+
T Consensus 379 PsGW~HaV~tleDS 392 (528)
T 3pur_A 379 PAGWIHAVLTPVDS 392 (528)
T ss_dssp CTTCEEEEEEEEEE
T ss_pred cCCceEEEecCCCe
Confidence 99999999997444
No 259
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=80.43 E-value=2.5 Score=45.00 Aligned_cols=63 Identities=19% Similarity=0.232 Sum_probs=48.4
Q ss_pred ccccccccccccCC-ceEEEEEEeeEEEEEEecCC------------------------ceEEeeecCCccEEEECCCcE
Q 048197 354 YQNAMMAPHWNLNA-HSVVYITRGNGRMQIVAENG------------------------ENVFDGQIREGQLIVVPQGFA 408 (480)
Q Consensus 354 ~pgam~~PHwh~nA-~ei~yV~~G~grv~vv~~~G------------------------~~~f~~~l~~GdV~vVPqg~~ 408 (480)
..|+....|..++. +-|.+|++|+=+.-++.|.- ...+.-.+++||+++||.||.
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 46777788998875 47899999999998887731 012334789999999999999
Q ss_pred EEEEcCCC
Q 048197 409 VVKRASNR 416 (480)
Q Consensus 409 ~~~~ag~e 416 (480)
|+..+-.+
T Consensus 384 HaV~tleD 391 (528)
T 3pur_A 384 HAVLTPVD 391 (528)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99877533
No 260
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=79.87 E-value=4.6 Score=37.87 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=51.6
Q ss_pred EeeeeccccccccccccCCc-e-EEEEEE--eeEEEEEEecCC-----------------ceEEeeecCCccEEEECCCc
Q 048197 349 EKGNLYQNAMMAPHWNLNAH-S-VVYITR--GNGRMQIVAENG-----------------ENVFDGQIREGQLIVVPQGF 407 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~-e-i~yV~~--G~grv~vv~~~G-----------------~~~f~~~l~~GdV~vVPqg~ 407 (480)
=...+.+|+...+|.|+++. . +.|+-- +.|.+.+.++.. .....-.-++||++++|..+
T Consensus 106 W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l 185 (216)
T 2rg4_A 106 WINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWL 185 (216)
T ss_dssp EEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTS
T ss_pred EEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCC
Confidence 34466899999999999874 3 444443 346777777631 11112357999999999999
Q ss_pred EEEEEc--CCCCeEEEEEEe
Q 048197 408 AVVKRA--SNRGLEWISFKT 425 (480)
Q Consensus 408 ~~~~~a--g~e~l~~v~f~t 425 (480)
.|.... +++.-.-|+|..
T Consensus 186 ~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 186 RHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp CEEECCCCSSSCEEEEEEEE
T ss_pred EEeccCCCCCCCEEEEEEEe
Confidence 998754 444555567754
No 261
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=79.01 E-value=4.6 Score=40.20 Aligned_cols=59 Identities=15% Similarity=0.315 Sum_probs=41.7
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
|.-.++.++++.++ ..+.. .+.+.++.|++|+|.+.. .| + ...|++||.++|
T Consensus 248 ~~~F~~~~~~~~~~-~~~~~-~~~~~il~v~~G~~~l~~--~~--~----------------------~~~l~~G~~~~v 299 (319)
T 1qwr_A 248 GEYFSVYKWDINGE-AEMAQ-DESFLICSVIEGSGLLKY--ED--K----------------------TCPLKKGDHFIL 299 (319)
T ss_dssp CSSCEEEEEEEEEE-EEECC-CSSCEEEEEEEEEEEEEE--TT--E----------------------EEEEETTCEEEE
T ss_pred CCEEEEEEEEECCc-eEEcc-CCccEEEEEEcCeEEEEE--CC--E----------------------EEEEcCCcEEEE
Confidence 34566777777644 32221 468899999999999864 12 1 358999999999
Q ss_pred CCCCEEE
Q 048197 158 PTGSANW 164 (480)
Q Consensus 158 PaG~~h~ 164 (480)
|++..-+
T Consensus 300 pa~~~~~ 306 (319)
T 1qwr_A 300 PAQMPDF 306 (319)
T ss_dssp CTTCCCE
T ss_pred eCCCceE
Confidence 9987433
No 262
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=78.67 E-value=11 Score=35.88 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=51.2
Q ss_pred EEEEcCCeeecCcccC-CCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCC--C
Q 048197 85 RHRIQQRGLVVPSYTN-TPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTG--S 161 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~-a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG--~ 161 (480)
..++.|+.=+.||=|. -..+.||++|+..-.-. -|. ...+++|||-.+-|| +
T Consensus 45 ~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS-~Gn------------------------~~~i~~GdvQ~MtAG~GI 99 (242)
T 1tq5_A 45 DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDS-MGN------------------------KEQVPAGEFQIMSAGTGI 99 (242)
T ss_dssp EEEECTTCEEEEEEECSCEEEEEEEESEEEEEES-SSC------------------------EEEEETTCEEEEECTTCE
T ss_pred cceeCCCCcCCCcCCCCcEEEEEEEEeEEEEEeC-CCC------------------------cEEECCCcEEEEECCCCc
Confidence 5678887655677665 55688999998766421 121 368999999999665 8
Q ss_pred EEEEEcCC-CCcEEEEEEe
Q 048197 162 ANWIYNDG-PSELVVVALV 179 (480)
Q Consensus 162 ~h~~~N~G-~~~l~~v~~~ 179 (480)
.|.-+|.. ++++..+-+.
T Consensus 100 ~HsE~~~~~~~~l~~lQlW 118 (242)
T 1tq5_A 100 RHSEYNPSSTERLHLYQIW 118 (242)
T ss_dssp EEEEECCCSSCCEEEEEEE
T ss_pred EEEEEcCCCCCeEEEEEEE
Confidence 99999965 4788887664
No 263
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=78.64 E-value=7.2 Score=37.68 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=52.6
Q ss_pred eeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCc--EEEEEc-C-CCCeEEEEEE
Q 048197 351 GNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGF--AVVKRA-S-NRGLEWISFK 424 (480)
Q Consensus 351 v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~--~~~~~a-g-~e~l~~v~f~ 424 (480)
..+.||+=+.||=|.+-..|.||++|+.. --|+-|+.. .+++|||-+.-+|- .|.+.+ . ++.++++-+-
T Consensus 69 ~~~~pg~gf~~HPHrg~EtvTyvl~G~~~--H~DS~Gn~~---~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 69 EVLAPGAAFQPRTYPKVDILNVILDGEAE--YRDSEGNHV---QASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEECTTCEEEEECCSSEEEEEEEEESEEE--EEETTSCEE---EEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred cccCCCCccCCcCCCCcEEEEEEEeeEEE--EEeCCCCEE---EECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 45677777789999888889999999854 457778764 49999999998875 587765 3 3678876543
No 264
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=78.17 E-value=7.8 Score=40.62 Aligned_cols=87 Identities=13% Similarity=0.068 Sum_probs=55.0
Q ss_pred CeEEEEEecCCCCcccccceeEEeeeeccccc-cccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC
Q 048197 327 GGRVTTVNRFNLPILRYIQLSAEKGNLYQNAM-MAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ 405 (480)
Q Consensus 327 ~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam-~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq 405 (480)
-|+.+.+...+ |.++. |+++....... .| -.-.+|.++++++|+-+|+++++= .-|. + .+++||++|||+
T Consensus 140 ~Gl~tl~gngD-~~~~~-G~aI~~y~~n~-sM~~~~f~NaDGD~Livpq~G~l~i~T--EfG~--L--~v~pgei~VIPR 210 (471)
T 1eyb_A 140 SGLHTLCGAGD-IKSNN-GLAIHIFLCNT-SMENRCFYNSDGDFLIVPQKGNLLIYT--EFGK--M--LVQPNEICVIQR 210 (471)
T ss_dssp TTEEEEEEESC-GGGTC-CEEEEEEEECS-CCCSEEEEESSEEEEEEEEESCEEEEE--TTEE--E--EECTTEEEEECT
T ss_pred cchhheeccCC-ccccc-ceEEEEEeCCC-CcccceeecCCCCEEEEEEeCCEEEEE--eccc--E--EeccCCEEEECC
Confidence 45555554433 44442 45544333333 45 345667778899999999988654 3343 3 589999999999
Q ss_pred CcEEEEEcCCCCeEEEEE
Q 048197 406 GFAVVKRASNRGLEWISF 423 (480)
Q Consensus 406 g~~~~~~ag~e~l~~v~f 423 (480)
|.-+.+.-.+ +...+.+
T Consensus 211 Gi~frv~l~~-p~Rgyi~ 227 (471)
T 1eyb_A 211 GMRFSIDVFE-ETRGYIL 227 (471)
T ss_dssp TCCEEEECSS-SEEEEEE
T ss_pred ccEEEEeeCC-CceEEEE
Confidence 9998775433 5554433
No 265
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=77.60 E-value=6.6 Score=38.76 Aligned_cols=59 Identities=10% Similarity=0.164 Sum_probs=42.1
Q ss_pred ccCeeEEEEEEcCCeeecCcccCCC-eEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLVVPSYTNTP-ELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~lPh~~~a~-el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
|.-.++.++++.+ ...+.. +.+ .++.|++| |.+.. .| + ...|++||+++
T Consensus 227 ~~~F~v~~~~~~~-~~~~~~--~~~~~il~v~~G-~~i~~--~~--~----------------------~~~l~~G~~~~ 276 (300)
T 1zx5_A 227 TENFGLEVVDVTG-TAEIKT--GGVMNILYAAEG-YFILR--GK--E----------------------TADLHRGYSCL 276 (300)
T ss_dssp CSSEEEEEEEEEE-EEEEEC--CSBCEEEEEEES-CEEEE--SS--S----------------------EEEECTTCEEE
T ss_pred CCeEEEEEEEECC-ceEEec--CCceEEEEEccc-EEEEe--CC--e----------------------EEEEccceEEE
Confidence 4467777888874 333322 677 89999999 98875 22 1 25899999999
Q ss_pred eCCCCEEEEE
Q 048197 157 LPTGSANWIY 166 (480)
Q Consensus 157 iPaG~~h~~~ 166 (480)
|||+..-+..
T Consensus 277 ipa~~~~~~i 286 (300)
T 1zx5_A 277 VPASTDSFTV 286 (300)
T ss_dssp ECTTCCEEEE
T ss_pred EeCCCceEEE
Confidence 9999854444
No 266
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=76.36 E-value=7.5 Score=38.66 Aligned_cols=60 Identities=13% Similarity=0.249 Sum_probs=39.2
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS 414 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag 414 (480)
.++.++.+..+.-. -......|+.|++|++.+.. +|.. + .|++||.++||++..-+...|
T Consensus 251 F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~~-~--~l~~G~~~~vpa~~~~~~i~g 310 (319)
T 1qwr_A 251 FSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDKT-C--PLKKGDHFILPAQMPDFTIKG 310 (319)
T ss_dssp CEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTEE-E--EEETTCEEEECTTCCCEEEEE
T ss_pred EEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCEE-E--EEcCCcEEEEeCCCceEEEEe
Confidence 44555555543221 22357789999999998865 3432 3 699999999999875343333
No 267
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=75.47 E-value=16 Score=29.96 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=53.5
Q ss_pred ceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 345 QLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 345 ~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
|--.....+.||- -++.+.+.|++=|+.|..+|.+-..+. . ..+++||-|.||++.-+-+... +...+++.
T Consensus 22 G~~~TvGVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~e-w---~~~~aGesF~Vpans~F~l~v~-~~~~YlC~ 92 (94)
T 2oyz_A 22 GQDVSVGVMLPGE---YTFGTQAPERMTVVKGALVVKRVGEAD-W---TTYSSGESFDVEGNSSFELQVK-DATAYLCE 92 (94)
T ss_dssp TEEEEEEEECSEE---EEEEESSCEEEEEEESEEEEEETTCSS-C---EEEETTCEEEECSSEEEEEEES-SCEEEEEE
T ss_pred CCCEEEEEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCCc-C---EEECCCCEEEECCCCEEEEEEc-ccEeEEEE
Confidence 4556667778874 577788999999999999988865532 2 2578999999999988765443 45777764
No 268
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=74.85 E-value=21 Score=29.31 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=40.6
Q ss_pred cCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEE
Q 048197 99 TNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVA 177 (480)
Q Consensus 99 ~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~ 177 (480)
+.++|++=|+.|...+-+ ||..+ -..+++||.|.||+..-+-+.-. ++...+|
T Consensus 39 T~~~E~M~vvsG~~~V~l--pg~~e----------------------w~~~~aGesF~Vpans~F~l~v~--~~~~YlC 91 (94)
T 2oyz_A 39 TQAPERMTVVKGALVVKR--VGEAD----------------------WTTYSSGESFDVEGNSSFELQVK--DATAYLC 91 (94)
T ss_dssp ESSCEEEEEEESEEEEEE--TTCSS----------------------CEEEETTCEEEECSSEEEEEEES--SCEEEEE
T ss_pred CCCeEEEEEEEeEEEEEc--CCCCc----------------------CEEECCCCEEEECCCCEEEEEEc--ccEeEEE
Confidence 469999999999988876 77544 36899999999999988877553 3344444
No 269
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=74.13 E-value=31 Score=33.78 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=53.2
Q ss_pred CcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEc-CCCC
Q 048197 339 PILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRG 417 (480)
Q Consensus 339 P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e~ 417 (480)
|......+....+.|.+|+-..-...+.-.-++||++|++.+ +|.. ....+.++.+++...|-...+.+ .+++
T Consensus 162 p~~~~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v-----~g~~-~~~~~~~~~~~~l~~gd~~~i~~~a~~~ 235 (290)
T 1j1l_A 162 KVYTRTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYI-----GPDD-AQQKIEPHHTAVLGEGDSVQVENKDPKR 235 (290)
T ss_dssp CCCCSSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEE-----SCTT-SCEEECTTEEEEECSCSEEEEECCSSSC
T ss_pred ceeccCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEE-----CCcc-cceeccCceEEEecCCCEEEEEEcCCCC
Confidence 333334678888999999988655544456899999999876 2210 00135667777777776665554 3567
Q ss_pred eEEEEEE
Q 048197 418 LEWISFK 424 (480)
Q Consensus 418 l~~v~f~ 424 (480)
.+++-|.
T Consensus 236 a~~LLl~ 242 (290)
T 1j1l_A 236 SHFVLIA 242 (290)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 8877665
No 270
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=73.91 E-value=5.9 Score=32.87 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=40.2
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIV 402 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~v 402 (480)
+....+.+|-+.-..= -.++.+.||++|.+++...+++|+...-..+.+||++-
T Consensus 28 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEG-DPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp CEEEEECTTCEEECTT-SEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred ceEEEeCCCCEEECCC-CCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 3455666666653322 23567999999999999999999876667899999873
No 271
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=73.05 E-value=7 Score=40.12 Aligned_cols=58 Identities=9% Similarity=0.193 Sum_probs=41.2
Q ss_pred cCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 79 ANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 79 ~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
...++.++++.++...+ -.+.+.++.|++|+|.+.. .+ + ...|++||+++||
T Consensus 322 ~~F~v~~~~l~~~~~~~--~~~~~~il~v~~G~~~l~~--~~--~----------------------~~~l~~G~~~fvp 373 (394)
T 2wfp_A 322 DDFAFSLHDLALQETSI--GQHSAAILFCVEGEAVLRK--DE--Q----------------------RLVLKPGESAFIG 373 (394)
T ss_dssp SSCEEEEEECCSSCEEE--CCSSCEEEEEEEEEEEEEE--TT--E----------------------EEEECTTCEEEEC
T ss_pred CEEEEEEEEEcCCeEEe--cCCCcEEEEEEeceEEEEE--CC--e----------------------EEEEccCcEEEEe
Confidence 35567778887553322 2367899999999998764 11 1 3589999999999
Q ss_pred CCCEEE
Q 048197 159 TGSANW 164 (480)
Q Consensus 159 aG~~h~ 164 (480)
++..-+
T Consensus 374 a~~~~~ 379 (394)
T 2wfp_A 374 ADESPV 379 (394)
T ss_dssp GGGCCE
T ss_pred CCCceE
Confidence 986433
No 272
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=72.94 E-value=16 Score=34.80 Aligned_cols=69 Identities=12% Similarity=0.184 Sum_probs=52.4
Q ss_pred eeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCc--EEEEEcC--CCCeEEEEE
Q 048197 350 KGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGF--AVVKRAS--NRGLEWISF 423 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~--~~~~~ag--~e~l~~v~f 423 (480)
.-.+.||+=+.||=|.+=..|.||++|+. .=-|+-|+.. .+++|||-+.-+|- .|...+. ++.++++-+
T Consensus 45 ~d~i~pg~gf~~HPHrg~EtvTyvl~G~~--~H~DS~Gn~~---~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQl 117 (242)
T 1tq5_A 45 DDVIEAGQGFGTHPHKDMEILTYVLEGTV--EHQDSMGNKE---QVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQI 117 (242)
T ss_dssp EEEECTTCEEEEEEECSCEEEEEEEESEE--EEEESSSCEE---EEETTCEEEEECTTCEEEEEECCCSSCCEEEEEE
T ss_pred cceeCCCCcCCCcCCCCcEEEEEEEEeEE--EEEeCCCCcE---EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEE
Confidence 34567877778999999989999999874 4557778764 59999999997775 4777663 356776643
No 273
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=72.82 E-value=16 Score=31.30 Aligned_cols=67 Identities=18% Similarity=0.272 Sum_probs=49.6
Q ss_pred cccccccccccCCc--eEEEEEEeeEEEEEEecCCc-----eEEeeecCCccEEEECCCcEEEEEcCCCCeEE-EEEEec
Q 048197 355 QNAMMAPHWNLNAH--SVVYITRGNGRMQIVAENGE-----NVFDGQIREGQLIVVPQGFAVVKRASNRGLEW-ISFKTN 426 (480)
Q Consensus 355 pgam~~PHwh~nA~--ei~yV~~G~grv~vv~~~G~-----~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~-v~f~ts 426 (480)
|-+++.-| ++.+- ..+-|++|+.+..+++.+|. .++ +.+|+..+||....|-+. -++++++ |.|...
T Consensus 25 P~~l~~~H-nTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~---~~~~~~~~i~Pq~wHrVe-~sdD~~f~leFyc~ 99 (119)
T 3dl3_A 25 PEALLTHH-NTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVV---INAGQFATSPPQYWHRIE-LSDDAQFNINFWSD 99 (119)
T ss_dssp CHHHHSSB-CCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEE---EETTEEEEECTTCEEEEE-ECTTCEEEEEEEEC
T ss_pred hHHHHhcc-CCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEE---eCCCCCceeCCCceEEEE-ECCCeEEEEEEEEC
Confidence 34556667 46665 44678999999999887664 233 789999999999999987 4556776 778753
No 274
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=72.34 E-value=7.5 Score=32.20 Aligned_cols=54 Identities=11% Similarity=0.147 Sum_probs=40.7
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
+...++.+|..+...-..++.++||++|...+....+++.+. .+..+.+||++-
T Consensus 28 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~--------------------~~~~~~~g~~~G 81 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGREN--------------------MLAVVGPSELIG 81 (149)
T ss_dssp CEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEE--------------------EEEEECTTCEES
T ss_pred ceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEE--------------------EEEEcCCcCEec
Confidence 346788888877666566888999999999998876654331 267899999873
No 275
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=71.67 E-value=13 Score=38.81 Aligned_cols=63 Identities=24% Similarity=0.301 Sum_probs=39.6
Q ss_pred eeEEeeeec--cccccccccccCCceEEEEEEeeEEEEEEecCCceE-EeeecCCccEEEECCCcEEEEEc
Q 048197 346 LSAEKGNLY--QNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENV-FDGQIREGQLIVVPQGFAVVKRA 413 (480)
Q Consensus 346 lsa~~v~L~--pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~-f~~~l~~GdV~vVPqg~~~~~~a 413 (480)
.++.++.+. +++-.. ........|+.|++|++.+.. ..+... . .|++||+++||++-.+.+.+
T Consensus 357 F~v~~~~~~~~~~~~~~-~~~~~~~~illv~~G~g~i~~--~~~~~~~~--~l~~G~~~fvpa~~~~~i~g 422 (440)
T 1pmi_A 357 FSVLQTIFDKSKGGKQV-IEGLNGPSIVIATNGKGTIQI--TGDDSTKQ--KIDTGYVFFVAPGSSIELTA 422 (440)
T ss_dssp CEEEEEECCTTTCCEEE-ECCCSSCEEEEEEESEEEEEE--TTCGGGCE--EEETTCEEEECTTCCEEEEE
T ss_pred EEEEEEEecCCCCceeE-EecCCCcEEEEEEeCeEEEEe--CCcccceE--EeccCCEEEEeCCCcEEEEE
Confidence 566666666 342111 112356789999999999875 222121 2 58999999999994444433
No 276
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=71.27 E-value=16 Score=32.75 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=47.3
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSA 162 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~ 162 (480)
+...++.+|..+...-..++.++||++|...+ ...+++.+. -+..+.+||+|-.|. .
T Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~-~~~~~G~~~--------------------~~~~~~~G~~~G~~~--~ 83 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNTERNLVFLVKSGRVRV-YLAYEDKEF--------------------TLAILEAGDIFCTHT--R 83 (220)
T ss_dssp SEEEEECTTCEEECTTCSSCEEEEEEESEEEE-EEECSSCEE--------------------EEEEEETTCEEESCS--S
T ss_pred hheeEeCCCCEEECCCCCCCeEEEEEecEEEE-EECCCCCEE--------------------EEEEcCCCCEeCCcc--c
Confidence 34667888887766556688999999999999 565554431 257899999998743 3
Q ss_pred EEEEcCCCCcEEE
Q 048197 163 NWIYNDGPSELVV 175 (480)
Q Consensus 163 h~~~N~G~~~l~~ 175 (480)
+.+....+..+..
T Consensus 84 ~~~~A~~~~~v~~ 96 (220)
T 2fmy_A 84 AFIQAMEDTTILY 96 (220)
T ss_dssp SEEEESSSEEEEE
T ss_pred eEEEEcCcEEEEE
Confidence 3444444444333
No 277
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=70.61 E-value=10 Score=33.23 Aligned_cols=53 Identities=9% Similarity=-0.028 Sum_probs=41.1
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
...++++|..+...=..+..++||++|...+-...+++.+. -+..+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~--------------------~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQ--------------------TTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEE--------------------EEEEEETTCEEC
T ss_pred EEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEE--------------------EEEEccCCcEEe
Confidence 45678888877665566899999999999999887765442 156889999985
No 278
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=70.33 E-value=8.1 Score=39.64 Aligned_cols=58 Identities=7% Similarity=0.174 Sum_probs=38.1
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEE
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKR 412 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ 412 (480)
.++.+++|.++.. +...++..|+.|++|++.+.. . +. .+ .|++||.++||++..-+..
T Consensus 324 F~v~~~~l~~~~~---~~~~~~~~il~v~~G~~~l~~--~-~~-~~--~l~~G~~~fvpa~~~~~~i 381 (394)
T 2wfp_A 324 FAFSLHDLALQET---SIGQHSAAILFCVEGEAVLRK--D-EQ-RL--VLKPGESAFIGADESPVNA 381 (394)
T ss_dssp CEEEEEECCSSCE---EECCSSCEEEEEEEEEEEEEE--T-TE-EE--EECTTCEEEECGGGCCEEE
T ss_pred EEEEEEEEcCCeE---EecCCCcEEEEEEeceEEEEE--C-Ce-EE--EEccCcEEEEeCCCceEEE
Confidence 4555566654422 233456699999999998653 2 32 23 6999999999998643433
No 279
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=70.13 E-value=6.7 Score=32.77 Aligned_cols=53 Identities=11% Similarity=0.094 Sum_probs=37.9
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+...++.+|..+...-..++.++||++|...+....+++.+. -+..+.+||+|
T Consensus 35 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~--------------------~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEK--------------------ILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-------------------------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEE--------------------EEEEccCCCee
Confidence 456678888877666667889999999999987665543321 25789999987
No 280
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=69.29 E-value=47 Score=31.81 Aligned_cols=80 Identities=11% Similarity=0.133 Sum_probs=59.6
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEe-eEEEEEEecCCc----------------eEEe----eecCCccEEEEC
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRG-NGRMQIVAENGE----------------NVFD----GQIREGQLIVVP 404 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G-~grv~vv~~~G~----------------~~f~----~~l~~GdV~vVP 404 (480)
.+.-.+.+.+|=+..-|+|+.-.|=+++.-| +..|.+..+... +.+. =.|.+|+-+.+|
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 6777889999999999999998888888887 666677665321 0110 168999999999
Q ss_pred CCcEEEEEcCCC-C-eEEEEEEe
Q 048197 405 QGFAVVKRASNR-G-LEWISFKT 425 (480)
Q Consensus 405 qg~~~~~~ag~e-~-l~~v~f~t 425 (480)
+|..|+..+..+ + +.+-.|.+
T Consensus 186 Pg~~H~F~ae~g~G~vligEVSt 208 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVGEVSS 208 (246)
T ss_dssp TTEEEEEEECTTSCCEEEEEEEE
T ss_pred CCCEEEEEecCCCccEEEEEccc
Confidence 999999988755 3 44444543
No 281
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=68.94 E-value=9.6 Score=33.69 Aligned_cols=116 Identities=12% Similarity=0.111 Sum_probs=72.7
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCC---------cEEEEEcCCCCeE
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQG---------FAVVKRASNRGLE 419 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg---------~~~~~~ag~e~l~ 419 (480)
....+.+|-+.---= -.++.+.+|++|.+++...+++|+...-..+.+||+|-...- +.+...|- ++.+
T Consensus 14 ~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~-~~~~ 91 (207)
T 2oz6_A 14 HRRRYTAKSTIIYAG-DRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAK-VECE 91 (207)
T ss_dssp EEEEECTTCEEECTT-SBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEES-SCEE
T ss_pred ceEEECCCCEEEcCC-CCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEEC-CcEE
Confidence 445566666553222 346789999999999999999998766668999999843211 22333443 4577
Q ss_pred EEEEEecC-------CCcc--------------------------------eee---ccc-------cccccCCCHHHHH
Q 048197 420 WISFKTND-------VAKT--------------------------------SQL---AGR-------ASVIRGLPLDVIQ 450 (480)
Q Consensus 420 ~v~f~ts~-------~~~~--------------------------------~~L---AG~-------~svl~~lp~eVla 450 (480)
++.+...+ +|.. .+| +-+ ..+.-.++.+-||
T Consensus 92 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA 171 (207)
T 2oz6_A 92 VAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIG 171 (207)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHH
T ss_pred EEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceecccCHHHHH
Confidence 77765321 2210 000 100 0122357899999
Q ss_pred HHcCCCHHHHHHHHhc
Q 048197 451 NSFQVSRDEAQRLKYN 466 (480)
Q Consensus 451 ~af~vs~e~~~~l~~~ 466 (480)
..+|++++.+.++.+.
T Consensus 172 ~~lg~sr~tvsR~l~~ 187 (207)
T 2oz6_A 172 RIVGCSREMVGRVLKS 187 (207)
T ss_dssp HHHTSCHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHH
Confidence 9999999998877654
No 282
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=68.42 E-value=20 Score=34.39 Aligned_cols=104 Identities=14% Similarity=0.087 Sum_probs=57.5
Q ss_pred CeeEEEEEEcCCeeecCcccC-CCeEEEEEec-eEEEEEEcCCCccchhhhh-h-cccccccccccccceeEeecCCcEE
Q 048197 80 NVAVFRHRIQQRGLVVPSYTN-TPELFYVVQG-RGIHGAVFPGCPETYQESQ-Q-RSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 80 gvs~~r~~i~p~gl~lPh~~~-a~el~yV~~G-~g~~g~v~pg~~etf~~~~-~-~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
-++---+.+.|+-...-|+|. -.|=++..-| ...+.+...+..+.+.+.. . .-.+..+... .- ..-.|.+|+-|
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-aG-~~i~L~PGESi 182 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-AG-SQLRLSPGESI 182 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-TT-CEEEECTTCEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-CC-CEEEECCCCeE
Confidence 466667788999999999986 4555555555 4444554443222111000 0 0000000000 00 13489999999
Q ss_pred EeCCCCEEEEEcCCCCcEEEEEEeeCCCCC
Q 048197 156 ALPTGSANWIYNDGPSELVVVALVDVGNSD 185 (480)
Q Consensus 156 ~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~ 185 (480)
-+|+|+-||++.-+...-++|.=+.+.|..
T Consensus 183 Tl~Pg~~H~F~ae~g~G~vligEVSt~NDD 212 (246)
T 3kmh_A 183 CLPPGLYHSFWAEAGFGDVLVGEVSSVNDD 212 (246)
T ss_dssp EECTTEEEEEEECTTSCCEEEEEEEECCCT
T ss_pred ecCCCCEEEEEecCCCccEEEEEcccCcCC
Confidence 999999999998655222444434455543
No 283
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=68.30 E-value=17 Score=32.63 Aligned_cols=68 Identities=18% Similarity=0.141 Sum_probs=46.2
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSA 162 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~ 162 (480)
+...++.+|..+...-..++.++||++|...+- ..+++.+. -+..+.+||+|- .-..
T Consensus 23 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~--------------------~~~~~~~G~~fG--~~~~ 79 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY-LVGEEREI--------------------SLFYLTSGDMFC--MHSG 79 (222)
T ss_dssp CEEEEECTTCEEECTTCCCCCEEEEEESEEEEE-EEETTEEE--------------------EEEEEETTCEEE--SCSS
T ss_pred CcEEEECCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEE--------------------EEEEcCCCCEec--CCCC
Confidence 446678888877665566889999999999994 55544331 257899999998 3334
Q ss_pred EEEEcCCCCcE
Q 048197 163 NWIYNDGPSEL 173 (480)
Q Consensus 163 h~~~N~G~~~l 173 (480)
+.+....+..+
T Consensus 80 ~~~~A~~~~~v 90 (222)
T 1ft9_A 80 CLVEATERTEV 90 (222)
T ss_dssp CEEEESSCEEE
T ss_pred EEEEEccceEE
Confidence 44555444433
No 284
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=68.26 E-value=12 Score=33.33 Aligned_cols=171 Identities=11% Similarity=-0.001 Sum_probs=85.9
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC-----
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP----- 158 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP----- 158 (480)
...++.+|..+...-..++.++||++|...+-...+++.+. -+..+.+||+|-..
T Consensus 23 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~--------------------~~~~~~~g~~~G~~~~~~~ 82 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQER--------------------TLALLGPGELFGEMSLLDE 82 (216)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEE--------------------EEEEECTTCEECHHHHHHC
T ss_pred eEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEE--------------------EEEEecCCCEEeehhhcCC
Confidence 45678888877666667899999999999998887765432 25789999998531
Q ss_pred CCCEEEEEcCCCCcEEEEEEeeCCCCCccc--cccceeeee---cCCCCcCccccccccCccccCCCCCCC--CCccccc
Q 048197 159 TGSANWIYNDGPSELVVVALVDVGNSDNQL--DQFLRKFYL---GGNPQPQLQGYSQSQGSRYQGSQGGEG--GDRSRRG 231 (480)
Q Consensus 159 aG~~h~~~N~G~~~l~~v~~~d~~n~~nql--d~~~~~F~L---aG~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~ 231 (480)
.-..+.+....+.. ++.+ +......-+ ++.+..+++ +..-..-........-..-..+- .. -.-...+
T Consensus 83 ~~~~~~~~a~~~~~--v~~i-~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl--~~~L~~~~~~~ 157 (216)
T 4ev0_A 83 GERSASAVAVEDTE--LLAL-FREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRV--AYALLKLLRQG 157 (216)
T ss_dssp CBCSSEEEESSSEE--EEEE-EHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTT
T ss_pred CCcceEEEEcCCEE--EEEE-cHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH--HHHHHHHhhcC
Confidence 11223333333333 3322 211110000 011111111 00000000000000000000000 00 0000001
Q ss_pred CcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCC
Q 048197 232 GNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP 279 (480)
Q Consensus 232 ~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P 279 (480)
..+.-.++.+-||..+|++++++.++.++=.+.|.|-.-.+.+.++.+
T Consensus 158 ~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I~~~~~~i~i~d~ 205 (216)
T 4ev0_A 158 LGPLFQIRHHELAALAGTSRETVSRVLHALAEEGVVRLGPGTVEVREA 205 (216)
T ss_dssp CCSEEECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEETTEEEESCH
T ss_pred CccCCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEecCCEEEEeCH
Confidence 234456899999999999999998887665556777655556666544
No 285
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=68.26 E-value=11 Score=34.13 Aligned_cols=54 Identities=11% Similarity=0.072 Sum_probs=41.3
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
...++.+|..+...=..++.++||++|...+....+++.+. -+..+.+||+|-.
T Consensus 35 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~--------------------~~~~~~~G~~~G~ 88 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEA--------------------VVSVFTRGESFGE 88 (237)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEE--------------------EEEEEETTEEECH
T ss_pred EEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEE--------------------EEEEeCCCCEech
Confidence 45677888877665566889999999999999887765442 2578999999843
No 286
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=67.91 E-value=12 Score=33.04 Aligned_cols=55 Identities=15% Similarity=0.213 Sum_probs=41.9
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
+...++.+|..+...-..++.++||++|...+....+.+.+. -+..+.+||+|-.
T Consensus 13 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~--------------------~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 13 CHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREM--------------------IIGYLNSGDFFGE 67 (207)
T ss_dssp SEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEE--------------------EEEEEETTCEESC
T ss_pred cceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEE--------------------EEEEcCCCCCccc
Confidence 345678888887666667889999999999998877654431 2578999999854
No 287
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=67.81 E-value=14 Score=36.37 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=38.0
Q ss_pred eeEEeeeeccccccccccccCCc-eEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcC
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAH-SVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAS 414 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~-ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag 414 (480)
.++.++.+....-. -. .+. .++.|++| +.+.. +|.. + .|++||.++||++..-+...+
T Consensus 230 F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~---~~~~-~--~l~~G~~~~ipa~~~~~~i~g 288 (300)
T 1zx5_A 230 FGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR---GKET-A--DLHRGYSCLVPASTDSFTVES 288 (300)
T ss_dssp EEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE---SSSE-E--EECTTCEEEECTTCCEEEEEE
T ss_pred EEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe---CCeE-E--EEccceEEEEeCCCceEEEEe
Confidence 45555555532211 22 566 89999999 88765 3443 2 599999999999985444444
No 288
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=67.39 E-value=49 Score=27.91 Aligned_cols=53 Identities=25% Similarity=0.250 Sum_probs=41.7
Q ss_pred cCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEcCCCCcEEEEE
Q 048197 99 TNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVA 177 (480)
Q Consensus 99 ~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~ 177 (480)
+.++|+.=|+.|...+-+ ||-.+ -..+++|+-|.||+..-+-+.-. ++...+|
T Consensus 55 T~~~E~MevvsG~l~V~L--pg~~e----------------------W~~~~aGesF~VpanssF~lkv~--~~~~Y~C 107 (111)
T 3hqx_A 55 THVPERMEIISGECRVKI--ADSTE----------------------SELFRAGQSFYVPGNSLFKIETD--EVLDYVC 107 (111)
T ss_dssp CSSCEEEEEEESEEEEEE--TTCSS----------------------CEEEETTCEEEECTTCEEEEECS--SCEEEEE
T ss_pred CCCcEEEEEEEeEEEEEc--CCccc----------------------CEEeCCCCEEEECCCCcEEEEEC--cceeEEE
Confidence 469999999999988876 77543 36899999999999998887654 4555555
No 289
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=67.30 E-value=11 Score=33.42 Aligned_cols=116 Identities=13% Similarity=0.058 Sum_probs=72.9
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC-----CCcEEEEEcCCCCeEEEEE
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP-----QGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP-----qg~~~~~~ag~e~l~~v~f 423 (480)
....+.+|-+.-..= -.++.+.||++|.+++...+++|+...-..+.+||+|-.. .-+.+...|- ++.+++.+
T Consensus 23 ~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~-~~~~v~~i 100 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQG-DLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAV-EDTELLAL 100 (216)
T ss_dssp EEEEECTTCEEECTT-CBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEES-SSEEEEEE
T ss_pred eEEEeCCCCEEEeCC-CCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEc-CCEEEEEE
Confidence 345555665543322 3467899999999999999999987666789999998421 1123333443 45777776
Q ss_pred EecC-------CCcc-----eeeccc-------------------------------cccccCCCHHHHHHHcCCCHHHH
Q 048197 424 KTND-------VAKT-----SQLAGR-------------------------------ASVIRGLPLDVIQNSFQVSRDEA 460 (480)
Q Consensus 424 ~ts~-------~~~~-----~~LAG~-------------------------------~svl~~lp~eVla~af~vs~e~~ 460 (480)
...+ +|.. ..++-+ ..+.-.++.+-+|..+|++++.+
T Consensus 101 ~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~tv 180 (216)
T 4ev0_A 101 FREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRETV 180 (216)
T ss_dssp EHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHHH
T ss_pred cHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHHH
Confidence 5321 2210 000000 12223579999999999999998
Q ss_pred HHHHhc
Q 048197 461 QRLKYN 466 (480)
Q Consensus 461 ~~l~~~ 466 (480)
.++.+.
T Consensus 181 sR~l~~ 186 (216)
T 4ev0_A 181 SRVLHA 186 (216)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 290
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=67.30 E-value=11 Score=30.89 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=37.5
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
+...++.+|-.+...=..++.++||++|...+-...+++.+.. ...+..+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~-----------------~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAA-----------------NSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC--------------------------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceE-----------------eeeEEEecCCCEec
Confidence 4566788888776666678999999999999876655443210 01157889999884
No 291
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=67.00 E-value=11 Score=34.17 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=47.4
Q ss_pred eeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC-----CCcEEEEEcCCCCeEEEEEE
Q 048197 350 KGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP-----QGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP-----qg~~~~~~ag~e~l~~v~f~ 424 (480)
...+.+|-+.-.- .-.++.+.||++|.+++...+++|+...-..+.+||+|-.. .-+.+...|- ++.+++.+.
T Consensus 36 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~-~~~~v~~i~ 113 (237)
T 3fx3_A 36 WRSYDRGETLFLQ-EEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAV-TPCEVMHIP 113 (237)
T ss_dssp EEEECTTCEEECT-TSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEES-SSEEEEEEE
T ss_pred EEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEEC-CceEEEEEc
Confidence 3444455444222 13467899999999999999999987666689999998331 1122333443 457777664
No 292
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=66.72 E-value=13 Score=34.21 Aligned_cols=162 Identities=12% Similarity=0.119 Sum_probs=87.9
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe--CCC
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL--PTG 160 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i--PaG 160 (480)
+...++.+|..+...-..++.++||++|...+....+++.+. -+..+.+||+|-. -..
T Consensus 32 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~--------------------~~~~~~~G~~~G~~l~~~ 91 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEK--------------------LLYYAGGNSLIGKLYPTG 91 (250)
T ss_dssp SEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEE--------------------EEEEECTTCEECCCSCCS
T ss_pred CeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEE--------------------EEEEecCCCEEeeecCCC
Confidence 456788888887766667889999999999999887765542 1578999999853 111
Q ss_pred CEEEEEcCCCCcEEEEEEeeCCCCCccc--cccceeeeec-----------------CCCCcCc-----cccccccCccc
Q 048197 161 SANWIYNDGPSELVVVALVDVGNSDNQL--DQFLRKFYLG-----------------GNPQPQL-----QGYSQSQGSRY 216 (480)
Q Consensus 161 ~~h~~~N~G~~~l~~v~~~d~~n~~nql--d~~~~~F~La-----------------G~~~~~~-----~~~~~~~~~~~ 216 (480)
..+.+....+..+..+ +......-+ ++.+..+++. -.+..+. ......
T Consensus 92 ~~~~~~A~~~~~v~~i---~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~----- 163 (250)
T 3e6c_C 92 NNIYATAMEPTRTCWF---SEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSS----- 163 (250)
T ss_dssp CCEEEEESSSEEEEEE---CHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH-----
T ss_pred CceEEEEcccEEEEEE---cHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-----
Confidence 3334444333332222 211110000 0111111100 0000000 000000
Q ss_pred cCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCC
Q 048197 217 QGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP 279 (480)
Q Consensus 217 ~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P 279 (480)
.|.. ...+..+--.++.+-||..+|++++++.++.+.=.+.|.|-.-.+.+.++.+
T Consensus 164 ~~~~-------~~~~~~i~~~~t~~~iA~~lG~sr~tvsR~l~~L~~~g~I~~~~~~i~i~d~ 219 (250)
T 3e6c_C 164 QGKR-------VGDTYEITMPLSQKSIGEITGVHHVTVSRVLASLKRENILDKKKNKIIVYNL 219 (250)
T ss_dssp HCEE-------ETTEEEEECCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECSSEEEESCH
T ss_pred hCCC-------CCCCcEecCCCCHHHHHHHhCCcHHHHHHHHHHHHHCCCeEeCCCEEEEecH
Confidence 0000 0001223456899999999999999998887665556777665566766654
No 293
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=66.54 E-value=46 Score=28.12 Aligned_cols=69 Identities=16% Similarity=0.241 Sum_probs=53.4
Q ss_pred eEEeeeeccccccc--cccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEE
Q 048197 347 SAEKGNLYQNAMMA--PHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISF 423 (480)
Q Consensus 347 sa~~v~L~pgam~~--PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f 423 (480)
-...+.+.|| + -++.+.+.|++=|+.|..+|.+-..+. + ..+.+|+-|.||.+--+-+... +...++|-
T Consensus 38 ~kTlGVm~PG---e~~YtF~T~~~E~MevvsG~l~V~Lpg~~e-W---~~~~aGesF~VpanssF~lkv~-~~~~Y~C~ 108 (111)
T 3hqx_A 38 KKTLGVILPT---EQPLTFETHVPERMEIISGECRVKIADSTE-S---ELFRAGQSFYVPGNSLFKIETD-EVLDYVCH 108 (111)
T ss_dssp EEEEEEECCC---SSCEEEECSSCEEEEEEESEEEEEETTCSS-C---EEEETTCEEEECTTCEEEEECS-SCEEEEEE
T ss_pred EEEEEEEecc---ccceEEcCCCcEEEEEEEeEEEEEcCCccc-C---EEeCCCCEEEECCCCcEEEEEC-cceeEEEE
Confidence 4555677787 4 678888999999999999998876542 2 2578999999999988776554 56888874
No 294
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=66.36 E-value=15 Score=33.82 Aligned_cols=62 Identities=11% Similarity=0.215 Sum_probs=46.8
Q ss_pred hccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcE
Q 048197 75 QLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDL 154 (480)
Q Consensus 75 ~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV 154 (480)
.|......+...++++|-++...-..++.++||++|...+-...+++.+. -+..+.+||+
T Consensus 35 ~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~--------------------~l~~~~~g~~ 94 (243)
T 3la7_A 35 QMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEI--------------------TVALLRENSV 94 (243)
T ss_dssp HHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEE--------------------EEEEECTTCE
T ss_pred HHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEE--------------------EEEEecCCCE
Confidence 33444455557889999988766667899999999999999887765442 2578999998
Q ss_pred EE
Q 048197 155 VA 156 (480)
Q Consensus 155 ~~ 156 (480)
|-
T Consensus 95 ~G 96 (243)
T 3la7_A 95 FG 96 (243)
T ss_dssp ES
T ss_pred Ec
Confidence 84
No 295
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=66.27 E-value=16 Score=35.56 Aligned_cols=55 Identities=13% Similarity=0.240 Sum_probs=39.1
Q ss_pred ccCeeEEEEEEcCCeee-cCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 78 CANVAVFRHRIQQRGLV-VPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~-lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
...+.+..++|+||+-+ +|--....-++||++|++.++ |+ + ..|.+||.++
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~----g~-~-----------------------~~l~~~d~~~ 215 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG----AD-N-----------------------IEGKAGQALF 215 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET----TT-T-----------------------EEEETTEEEE
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC----CC-c-----------------------eEeCCCcEEE
Confidence 34788888999999843 443223457899999997763 21 1 3689999999
Q ss_pred eCC-C
Q 048197 157 LPT-G 160 (480)
Q Consensus 157 iPa-G 160 (480)
+.. |
T Consensus 216 ~~~~~ 220 (277)
T 2p17_A 216 FSRHN 220 (277)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 875 5
No 296
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=66.25 E-value=14 Score=32.73 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=42.0
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
...++.+|..+...-..+..++||++|...+-...+++.+. -+..+.+||+|-.
T Consensus 20 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~--------------------~~~~~~~g~~~G~ 73 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM--------------------ILSYLNQGDFIGE 73 (210)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEE--------------------EEEEEETTCEESC
T ss_pred EEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEE--------------------EEEEcCCCCEeee
Confidence 45678888887666667899999999999998887765432 2578999999853
No 297
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=66.19 E-value=8.1 Score=33.94 Aligned_cols=100 Identities=9% Similarity=0.104 Sum_probs=43.1
Q ss_pred CCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEE-EC---CC--cEEEEEcCCCCeEEEEEEecC-------CCcc-
Q 048197 366 NAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIV-VP---QG--FAVVKRASNRGLEWISFKTND-------VAKT- 431 (480)
Q Consensus 366 nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~v-VP---qg--~~~~~~ag~e~l~~v~f~ts~-------~~~~- 431 (480)
.++.+.||++|.+++...+++|+...-.-+.+||++- +. .+ +.+...|- ++.+++.+...+ +|..
T Consensus 47 ~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~-~~~~v~~i~~~~~~~l~~~~p~~~ 125 (194)
T 3dn7_A 47 ICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSV-ENCELLSITYTEQENLFERIPALE 125 (194)
T ss_dssp BCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEES-SCEEEEEEEHHHHHHHHHHCTTHH
T ss_pred eeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEE-CCEEEEEEeHHHHHHHHHhCHHHH
Confidence 4678999999999999999999876666789999995 31 11 22333443 457777765321 2210
Q ss_pred -------------------------------eeeccccccccCCCHHHHHHHcCCCHHHHHHHHhc
Q 048197 432 -------------------------------SQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYN 466 (480)
Q Consensus 432 -------------------------------~~LAG~~svl~~lp~eVla~af~vs~e~~~~l~~~ 466 (480)
.+|.-...+...++.+-||..+|++++++.++.+.
T Consensus 126 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~t~~~iA~~lG~sretlsR~l~~ 191 (194)
T 3dn7_A 126 RYFRLVYQKSFAAAQLRSKFQHMYSKEEQYHNFSSRFPEFIQRVPQYLLASYLGFTPEYLSEIRKK 191 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHChHHHHHCCHHHHHHHhCCCHHHHHHHHHh
Confidence 00000012233567888888888888888887653
No 298
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=65.22 E-value=14 Score=32.61 Aligned_cols=53 Identities=8% Similarity=0.049 Sum_probs=41.2
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+...++.+|..+...=..+..+++|++|...+-...+++.+. .+..+.+||+|
T Consensus 62 ~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~--------------------~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQ--------------------TIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEE--------------------EEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeE--------------------EEEEccCCCee
Confidence 456678888877666667889999999999998877665431 26789999988
No 299
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=65.15 E-value=10 Score=34.11 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=42.4
Q ss_pred eEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 82 AVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 82 s~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
.+...++.+|..+...-..++.++||++|...+-...+++.+. -+..+.+||+|-
T Consensus 21 ~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~--------------------~~~~~~~G~~~G 75 (213)
T 1o5l_A 21 CGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTL--------------------EIDEIKPVQIIA 75 (213)
T ss_dssp GSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEE--------------------EEEEECSSEESS
T ss_pred ccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEE--------------------EEEEecCCCEee
Confidence 3456788899887766667889999999999998887755432 257899999883
No 300
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=64.82 E-value=13 Score=32.92 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=48.6
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC------CcEEEEEcCCCCeEEEE
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ------GFAVVKRASNRGLEWIS 422 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq------g~~~~~~ag~e~l~~v~ 422 (480)
....+.+|-+.-..= -.++.+.||++|.+++...+++|+...-..+.+||+|-... -+.+...|- ++.+++.
T Consensus 20 ~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~-~~~~v~~ 97 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQG-EKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK-TACEVAE 97 (210)
T ss_dssp EEEEECTTCEEECTT-SBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEES-SCEEEEE
T ss_pred EEEEeCCCCEEECCC-CCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC-CcEEEEE
Confidence 344555555443222 34678999999999999999999876666899999984221 122333443 4577777
Q ss_pred EE
Q 048197 423 FK 424 (480)
Q Consensus 423 f~ 424 (480)
+.
T Consensus 98 i~ 99 (210)
T 3ryp_A 98 IS 99 (210)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 301
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=64.69 E-value=6.2 Score=39.71 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=27.4
Q ss_pred EeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEee
Q 048197 147 RQIREGDLVALPTGSANWIYNDGPSELVVVALVD 180 (480)
Q Consensus 147 ~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d 180 (480)
..=++||.|++++|..||.+|.|-.--+.+.+..
T Consensus 281 ~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~ 314 (332)
T 2xxz_A 281 FVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGP 314 (332)
T ss_dssp EEECTTCEEEECTTCEEEEEESSSEEEEEEEEES
T ss_pred EEECCCCEEEECCCceEEEEecceeeEEEEEeCC
Confidence 4568999999999999999999975555555543
No 302
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=64.19 E-value=13 Score=32.73 Aligned_cols=46 Identities=15% Similarity=0.215 Sum_probs=34.5
Q ss_pred ccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCC
Q 048197 234 LFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP 279 (480)
Q Consensus 234 i~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P 279 (480)
+--.++.+-||..+|++++++.++.++=.+.|.|-.-.+.+.++.+
T Consensus 136 ~~~~~t~~~lA~~lg~sr~tvsR~l~~L~~~g~I~~~~~~i~i~d~ 181 (195)
T 3b02_A 136 IYVTVSHEEIADATASIRESVSKVLADLRREGLIATAYRRVYLLDL 181 (195)
T ss_dssp EEEECCHHHHHHTTTSCHHHHHHHHHHHHHHTSEEEETTEEEECCH
T ss_pred eeccCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEecCCEEEEeCH
Confidence 3346889999999999999998887665556777665556666554
No 303
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=64.18 E-value=6.2 Score=33.00 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=34.5
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLI 401 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~ 401 (480)
+....+.+|-+.-.-- -.++.+.||++|.+++...+++|+...-..+.+||+|
T Consensus 35 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQG-EPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCC-CccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 4445555665553322 3467899999999999988888876555678999987
No 304
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=63.96 E-value=15 Score=32.98 Aligned_cols=54 Identities=22% Similarity=0.175 Sum_probs=41.8
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
...++++|..+...-..++.++||++|...+-...+++.+. -+..+.+||+|-.
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~--------------------~~~~~~~g~~~G~ 88 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDREL--------------------VLGYFGSGEFVGE 88 (230)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEE--------------------EEEEECTTCEESC
T ss_pred eEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEE--------------------EEEEecCCCEEEe
Confidence 46678888877666566899999999999999887765432 2578999999853
No 305
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=63.70 E-value=12 Score=33.96 Aligned_cols=164 Identities=10% Similarity=0.065 Sum_probs=83.9
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC----
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP---- 158 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP---- 158 (480)
+...++.+|-++...-..++.++||++|...+-...+++.+. -+..+.+||+|-..
T Consensus 33 ~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~--------------------~~~~~~~G~~~G~~~~~~ 92 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFH--------------------ISRIVKPGQFFGMRPYFA 92 (232)
T ss_dssp CEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCC--------------------EEEEECTTCEESHHHHHH
T ss_pred CeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEE--------------------EEEEeCCCCEeeeehhhC
Confidence 456788888887666667889999999999998776644331 26789999998422
Q ss_pred -CCCEEEEEcCCCCcEEEEEEeeCCCCCccc--cccceeeeecC--C--------------CCcCccc--c-ccccCccc
Q 048197 159 -TGSANWIYNDGPSELVVVALVDVGNSDNQL--DQFLRKFYLGG--N--------------PQPQLQG--Y-SQSQGSRY 216 (480)
Q Consensus 159 -aG~~h~~~N~G~~~l~~v~~~d~~n~~nql--d~~~~~F~LaG--~--------------~~~~~~~--~-~~~~~~~~ 216 (480)
.-..+.+....+..+..+ +......-+ ++.+..+++.- . ....+.- . -.. ...
T Consensus 93 ~~~~~~~~~A~~~~~v~~i---~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l--~~~ 167 (232)
T 2gau_A 93 EETCSSTAIAVENSKVLAI---PVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLIL--KEN 167 (232)
T ss_dssp TSCCSSEEEESSCEEEEEE---EHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH--HHH
T ss_pred CCCcceEEEEecceEEEEE---EHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH--HHH
Confidence 112334444444333332 211100000 01111111100 0 0000000 0 000 000
Q ss_pred cCCCCCCCCCcccccCcccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCC
Q 048197 217 QGSQGGEGGDRSRRGGNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP 279 (480)
Q Consensus 217 ~g~~~~~~~~~~~~~~ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P 279 (480)
.|. ......+.-.++.+-||..+|++++++.++.++=.+.|.|-.-.+.+.++.+
T Consensus 168 ~~~--------~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I~~~~~~i~i~d~ 222 (232)
T 2gau_A 168 FGF--------ENDGATLSIYLSREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIIDC 222 (232)
T ss_dssp HCB--------CTTSSBBSCCCCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEETTEEEESCH
T ss_pred cCC--------CCCCcEEEcccCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeCCCEEEEeCH
Confidence 010 0011234457899999999999999998887665556777665556666554
No 306
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=63.10 E-value=17 Score=32.69 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=40.2
Q ss_pred EEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 85 RHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
..++.+|-.+...-..++.++||++|...+-...+++.+. -+..+.+||+|-
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~--------------------~~~~~~~G~~~G 82 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGREN--------------------LLTIMGPSDMFG 82 (227)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEE--------------------EEEEECTTCEES
T ss_pred EEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEE--------------------EEEEecCCCEEe
Confidence 5678888877665567889999999999998887655431 257899999984
No 307
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=62.49 E-value=12 Score=34.16 Aligned_cols=117 Identities=9% Similarity=0.008 Sum_probs=73.6
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC-----CC-cEEEEEcCCCCeEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP-----QG-FAVVKRASNRGLEWI 421 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP-----qg-~~~~~~ag~e~l~~v 421 (480)
+....+.+|-+.---- -.++.+.||++|.+++...+++|+...-..+.+||+|-.. .. +.+...|- ++.+++
T Consensus 43 ~~~~~~~~ge~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~-~~~~v~ 120 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSG-NPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH-TEVHTV 120 (232)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES-SCEEEE
T ss_pred cEEEEECCCCEEECCC-CcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc-cceEEE
Confidence 4556666666654322 3467899999999999999999986665678999988321 11 33444453 457777
Q ss_pred EEEec-------CCCcc--------------------------------eee---cccc--ccccCCCHHHHHHHcCCCH
Q 048197 422 SFKTN-------DVAKT--------------------------------SQL---AGRA--SVIRGLPLDVIQNSFQVSR 457 (480)
Q Consensus 422 ~f~ts-------~~~~~--------------------------------~~L---AG~~--svl~~lp~eVla~af~vs~ 457 (480)
.+... .+|.. .+| +-.. .+.-.++.+-||..+|+++
T Consensus 121 ~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~sr 200 (232)
T 1zyb_A 121 CISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDTR 200 (232)
T ss_dssp EEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSCH
T ss_pred EEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCCh
Confidence 66532 12100 000 0000 1223478999999999999
Q ss_pred HHHHHHHhc
Q 048197 458 DEAQRLKYN 466 (480)
Q Consensus 458 e~~~~l~~~ 466 (480)
+.+.++.+.
T Consensus 201 ~tvsR~l~~ 209 (232)
T 1zyb_A 201 LNISKTLNE 209 (232)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 998877553
No 308
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=62.23 E-value=12 Score=33.83 Aligned_cols=117 Identities=15% Similarity=0.134 Sum_probs=71.7
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC-----CCcEEEEEcCCCCeEEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP-----QGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP-----qg~~~~~~ag~e~l~~v~ 422 (480)
+....+.+|-+.-.-= -.++.+.||++|.+++...+++|+...-..+.+||+|-.. .-+.+...|- ++.+++.
T Consensus 29 ~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~-~~~~v~~ 106 (231)
T 3e97_A 29 VTERNFQPDELVVEQD-AEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRAL-TPVRTLM 106 (231)
T ss_dssp EEEEEECTTCBCCCTT-CTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEES-SCEEEEE
T ss_pred cEEEEECCCCEEEeCC-CCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEEC-CcEEEEE
Confidence 3455566666553332 3477899999999999999999987666789999998422 1223444443 4577776
Q ss_pred EEecC-------CCcc---------------------------eeec----------ccc----ccccCCCHHHHHHHcC
Q 048197 423 FKTND-------VAKT---------------------------SQLA----------GRA----SVIRGLPLDVIQNSFQ 454 (480)
Q Consensus 423 f~ts~-------~~~~---------------------------~~LA----------G~~----svl~~lp~eVla~af~ 454 (480)
+...+ +|.. .-++ |.. .+.-.++.+-||..+|
T Consensus 107 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~~~t~~~iA~~lg 186 (231)
T 3e97_A 107 LHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAAGVPQPEVLPLGTQDIMARTS 186 (231)
T ss_dssp ECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSTTEECCCHHHHHHHHT
T ss_pred EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhcCCCCCCceEecCCCHHHHHHHhC
Confidence 64221 1210 0000 000 1223578999999999
Q ss_pred CCHHHHHHHHhc
Q 048197 455 VSRDEAQRLKYN 466 (480)
Q Consensus 455 vs~e~~~~l~~~ 466 (480)
++++.+.++.+.
T Consensus 187 ~sr~tvsR~l~~ 198 (231)
T 3e97_A 187 SSRETVSRVLKR 198 (231)
T ss_dssp CCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999998887654
No 309
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=62.18 E-value=14 Score=33.26 Aligned_cols=126 Identities=14% Similarity=0.124 Sum_probs=53.0
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC-----C-CcEEEEEcCCCCeE
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP-----Q-GFAVVKRASNRGLE 419 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP-----q-g~~~~~~ag~e~l~ 419 (480)
-.+....+.+|.+.--.- -.++.+.+|++|.+++...+++|+...-..+.+||+|-.. . .+.+...|- ++.+
T Consensus 20 ~~~~~~~~~~g~~i~~~G-~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~-~~~~ 97 (213)
T 1o5l_A 20 PCGKVIVFRKGEIVKHQD-DPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAG-ENSK 97 (213)
T ss_dssp GGSEEEEECTTCEEECTT-CBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEES-SSEE
T ss_pred cccEEEEECCCCEEEcCC-CccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEc-cceE
Confidence 345556677777654332 3467899999999999999999987666689999988321 1 233344443 4577
Q ss_pred EEEEEecC-------CCcc--------------------------------eee---cccc-ccccCCCHHHHHHHcCCC
Q 048197 420 WISFKTND-------VAKT--------------------------------SQL---AGRA-SVIRGLPLDVIQNSFQVS 456 (480)
Q Consensus 420 ~v~f~ts~-------~~~~--------------------------------~~L---AG~~-svl~~lp~eVla~af~vs 456 (480)
++.+...+ +|.. .+| +.+. .+.-.++.+.||..+|++
T Consensus 98 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~g~~~~~~t~~~lA~~lg~s 177 (213)
T 1o5l_A 98 ILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVTLEELSRLFGCA 177 (213)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------------------
T ss_pred EEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCCcccCCCCHHHHHHHhCCC
Confidence 77664221 2210 000 0000 111246788899999999
Q ss_pred HHHHHHHHhcCCCeEEe
Q 048197 457 RDEAQRLKYNRQELTVF 473 (480)
Q Consensus 457 ~e~~~~l~~~q~e~~i~ 473 (480)
++.+.++.+.-.+.-++
T Consensus 178 r~tvsR~l~~L~~~G~I 194 (213)
T 1o5l_A 178 RPALSRVFQELEREGYI 194 (213)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHHCCeE
Confidence 99988876654433333
No 310
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=62.16 E-value=5.6 Score=32.78 Aligned_cols=54 Identities=9% Similarity=0.140 Sum_probs=31.6
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEE---eeecCCccEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVF---DGQIREGQLIV 402 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f---~~~l~~GdV~v 402 (480)
+....+.+|-+.--- .-.++.+.||++|.+++...+++|+... -..+.+||+|=
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 344445555543221 1347789999999999999888886554 45789999883
No 311
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=62.02 E-value=18 Score=32.17 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=41.6
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
...++.+|..+...-..++.++||++|...+....+++.+. -+..+.+||++.
T Consensus 27 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~--------------------~~~~~~~G~~~~ 79 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREI--------------------TLYRLFDMDMCL 79 (220)
T ss_dssp EEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEE--------------------EEEEECTTCEES
T ss_pred ceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEE--------------------EEEecCCCCeee
Confidence 46788888887766667899999999999999887765432 257899999963
No 312
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=61.87 E-value=14 Score=33.70 Aligned_cols=54 Identities=13% Similarity=0.064 Sum_probs=40.7
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
+...++.+|..+...-..++.++||++|...+-...+++.+. -+..+.+||+|-
T Consensus 43 ~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~--------------------~l~~~~~G~~fG 96 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYT--------------------VIEQIEAPYLIE 96 (232)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCE--------------------EEEEEESSEEEC
T ss_pred cEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEE--------------------EEEEccCCCeee
Confidence 456678888877665567889999999999998776654331 257889999884
No 313
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=61.73 E-value=11 Score=33.41 Aligned_cols=100 Identities=11% Similarity=0.121 Sum_probs=63.6
Q ss_pred CCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE---C-CCcEEEEEcCCCCeEEEEEEecCC-Ccc---------
Q 048197 366 NAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV---P-QGFAVVKRASNRGLEWISFKTNDV-AKT--------- 431 (480)
Q Consensus 366 nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV---P-qg~~~~~~ag~e~l~~v~f~ts~~-~~~--------- 431 (480)
.++.+.||++|.+++...+++|+...-..+.+||+|-- - .-+.+...|- ++.+++.+...+- |..
T Consensus 16 ~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~-~~~~v~~i~~~~~~p~~~~~~~~~l~ 94 (195)
T 3b02_A 16 EARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAM-TEAVVQGLEPRAMDHEALHRVARNLA 94 (195)
T ss_dssp BCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEES-SSEEEEEECGGGCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEEC-CcEEEEEEcHHHcCHHHHHHHHHHHH
Confidence 46779999999999999999998766668999999843 1 1122333443 4567666643221 100
Q ss_pred -----------------------eee---c---ccc---c-cccCCCHHHHHHHcCCCHHHHHHHHhc
Q 048197 432 -----------------------SQL---A---GRA---S-VIRGLPLDVIQNSFQVSRDEAQRLKYN 466 (480)
Q Consensus 432 -----------------------~~L---A---G~~---s-vl~~lp~eVla~af~vs~e~~~~l~~~ 466 (480)
.+| + |.. . +.-.++.+-||..+|++++.+.++.+.
T Consensus 95 ~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~ 162 (195)
T 3b02_A 95 RQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESVSKVLAD 162 (195)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCeeeccCCHHHHHHHhCCCHHHHHHHHHH
Confidence 001 0 100 0 223478999999999999998877553
No 314
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=61.67 E-value=26 Score=29.35 Aligned_cols=69 Identities=10% Similarity=0.123 Sum_probs=50.2
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEE
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~ 422 (480)
--...+.|.|| +-++++.+.|++=|+.|..+|.+-..+ .+ ..+++|+-|.||++--+-+... +...|++
T Consensus 36 ~~kTlGVm~PG---eY~F~T~~~E~MevvsG~l~V~LpG~~-eW---~~~~aGesF~VpanssF~lkv~-~~t~Y~C 104 (106)
T 3eo6_A 36 SMHSLTLLHPG---VYTLSSEVAETIRVLSGMAYYHAEGAN-DV---QELHAGDSMVIPANQSYRLEVM-EPLDYLL 104 (106)
T ss_dssp CEEEEEEECSE---EEEECCSSCEEEEEEEEEEEEECTTCS-SC---EEEETTCEEEECSSSCEEEEEE-EEEEEEE
T ss_pred CeEEEEEEeee---EEEecCCCcEEEEEEEeEEEEECCCCc-cC---EEECCCCEEEECCCCcEEEEEC-ceEEEEE
Confidence 34556677887 567888899999999999998876543 22 2588999999999877655332 3455554
No 315
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=61.41 E-value=16 Score=33.51 Aligned_cols=73 Identities=19% Similarity=0.134 Sum_probs=50.3
Q ss_pred eeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE-------CCCcEEEEEcCCCCeEEEE
Q 048197 350 KGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV-------PQGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV-------Pqg~~~~~~ag~e~l~~v~ 422 (480)
...+.+|-+.-.-- -.++.+.+|++|.+++...+++|+...-..+.+||+|-. |..+.+...|- ++.+++.
T Consensus 45 ~~~~~~ge~i~~~G-~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~-~~~~v~~ 122 (243)
T 3la7_A 45 VETFERNKTIFFPG-DPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAF-TPVELLS 122 (243)
T ss_dssp EEEECTTCEEECTT-SBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEES-SSEEEEE
T ss_pred eEEECCCCEEEcCC-CCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEc-cceEEEE
Confidence 66677777664333 346789999999999999999998766678999998832 11112333443 4577776
Q ss_pred EE
Q 048197 423 FK 424 (480)
Q Consensus 423 f~ 424 (480)
+.
T Consensus 123 i~ 124 (243)
T 3la7_A 123 AP 124 (243)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 316
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=61.10 E-value=17 Score=32.35 Aligned_cols=116 Identities=12% Similarity=0.174 Sum_probs=72.7
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE-------CCCcEEEEEcCCCCeEEE
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV-------PQGFAVVKRASNRGLEWI 421 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV-------Pqg~~~~~~ag~e~l~~v 421 (480)
....+.+|-+.-..= -.++.+.||++|.+++...+++|+...-..+.+||++.+ ..-+.+...|- ++.+++
T Consensus 27 ~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~-~~~~~~ 104 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGN-MDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAE-KDTDLW 104 (220)
T ss_dssp EEEEECTTCEEEEGG-GCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEES-SCEEEE
T ss_pred ceEEeCCCCEEECCC-CCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEe-eeeEEE
Confidence 345555555543322 346789999999999999999998766668999999632 11233344443 457777
Q ss_pred EEEecC-------CCcc-----eeeccc-------------------------------cccccCCCHHHHHHHcCCCHH
Q 048197 422 SFKTND-------VAKT-----SQLAGR-------------------------------ASVIRGLPLDVIQNSFQVSRD 458 (480)
Q Consensus 422 ~f~ts~-------~~~~-----~~LAG~-------------------------------~svl~~lp~eVla~af~vs~e 458 (480)
.+...+ +|.. ..++-+ ..+--.++.+-||..+|++++
T Consensus 105 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~ 184 (220)
T 3dv8_A 105 IIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHRE 184 (220)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCHH
Confidence 775322 2210 000000 011126789999999999999
Q ss_pred HHHHHHhc
Q 048197 459 EAQRLKYN 466 (480)
Q Consensus 459 ~~~~l~~~ 466 (480)
.+.++.+.
T Consensus 185 tvsR~l~~ 192 (220)
T 3dv8_A 185 VITRMLRY 192 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887654
No 317
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=61.08 E-value=12 Score=33.07 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=69.6
Q ss_pred eeeccccccccccccCC--ceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE----CCCcEEEEEcCCCCeEEEEEE
Q 048197 351 GNLYQNAMMAPHWNLNA--HSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV----PQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 351 v~L~pgam~~PHwh~nA--~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV----Pqg~~~~~~ag~e~l~~v~f~ 424 (480)
..+.+|-+.-..= -.+ +.+.||++|.+++...+++|+...-..+.+||+|-. ...+.+...|- ++.+++.+
T Consensus 8 ~~~~~g~~i~~~g-~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~-~~~~v~~i- 84 (202)
T 2zcw_A 8 VSFKAGDVILYPG-VPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA-TDVRLEPL- 84 (202)
T ss_dssp EEECTTCEEECSB-SCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES-SCEEEEEC-
T ss_pred EEECCCCEEECCC-CCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc-ccEEEEEE-
Confidence 4455555543322 234 678999999999999999998766678999998843 11223334443 45666666
Q ss_pred ecCC-Ccc--------------------------------ee---ec---cc----cccccCCCHHHHHHHcCCCHHHHH
Q 048197 425 TNDV-AKT--------------------------------SQ---LA---GR----ASVIRGLPLDVIQNSFQVSRDEAQ 461 (480)
Q Consensus 425 ts~~-~~~--------------------------------~~---LA---G~----~svl~~lp~eVla~af~vs~e~~~ 461 (480)
..+- |.. .+ ++ |. ..+.-.++.+.||..+|++++.+.
T Consensus 85 ~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvs 164 (202)
T 2zcw_A 85 PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRETVT 164 (202)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHHHH
T ss_pred hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHHHH
Confidence 4321 100 00 00 00 012234789999999999999988
Q ss_pred HHHhc
Q 048197 462 RLKYN 466 (480)
Q Consensus 462 ~l~~~ 466 (480)
++.+.
T Consensus 165 R~l~~ 169 (202)
T 2zcw_A 165 KVIGE 169 (202)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77553
No 318
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=60.83 E-value=17 Score=33.38 Aligned_cols=116 Identities=12% Similarity=0.086 Sum_probs=75.7
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE---CCCcEEEEEcCCCCeEEEEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV---PQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV---Pqg~~~~~~ag~e~l~~v~f~ 424 (480)
+....+.+|-+.-.-- -.++.+.||++|.+++...+++|+...-..+.+||+|-. .. +.+...|- ++.+++.+.
T Consensus 32 ~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~-~~~~~~A~-~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPG-EEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTG-NNIYATAM-EPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECTT-CCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCS-CCEEEEES-SSEEEEEEC
T ss_pred CeEEEECCCCEEECCC-CCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCC-CceEEEEc-ccEEEEEEc
Confidence 4556666776654332 356789999999999999999998766678999999843 22 44445553 357777664
Q ss_pred ec-------CCCcc--------------------------------eee---c---cc-----cccccCCCHHHHHHHcC
Q 048197 425 TN-------DVAKT--------------------------------SQL---A---GR-----ASVIRGLPLDVIQNSFQ 454 (480)
Q Consensus 425 ts-------~~~~~--------------------------------~~L---A---G~-----~svl~~lp~eVla~af~ 454 (480)
.. .+|.. .+| + |. ..+.-.++.+-||..+|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 22 12210 000 0 00 01223579999999999
Q ss_pred CCHHHHHHHHhc
Q 048197 455 VSRDEAQRLKYN 466 (480)
Q Consensus 455 vs~e~~~~l~~~ 466 (480)
++++++.++.+.
T Consensus 189 ~sr~tvsR~l~~ 200 (250)
T 3e6c_C 189 VHHVTVSRVLAS 200 (250)
T ss_dssp CCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999998887654
No 319
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=60.80 E-value=1.1e+02 Score=28.82 Aligned_cols=58 Identities=9% Similarity=0.033 Sum_probs=38.6
Q ss_pred cCCceE-EEeCCCCh------hccccCeeEEEEEEcCCeeecCccc--CCCeEEEEEeceE-EEEEEcCCC
Q 048197 61 SEAGVT-EFWDQNDE------QLQCANVAVFRHRIQQRGLVVPSYT--NTPELFYVVQGRG-IHGAVFPGC 121 (480)
Q Consensus 61 se~G~~-e~~~~~~~------~l~~~gvs~~r~~i~p~gl~lPh~~--~a~el~yV~~G~g-~~g~v~pg~ 121 (480)
-|||.+ |+|-.... .-+ ...+....-|.++.. =+|| +++|+-|...|.. .+-++.|++
T Consensus 34 PEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG 101 (225)
T 3m3i_A 34 PEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDP 101 (225)
T ss_dssp TTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSS
T ss_pred CCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCC
Confidence 489998 45643221 112 234566678888885 3555 6999999999985 677777765
No 320
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=60.74 E-value=13 Score=33.53 Aligned_cols=55 Identities=24% Similarity=0.157 Sum_probs=41.2
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
+...++.+|..+...-..++.++||++|...+-...+++.+. -+..+.+||+|-.
T Consensus 29 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~--------------------~~~~~~~g~~~G~ 83 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRER--------------------VLGDIYAPGVVGE 83 (231)
T ss_dssp EEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEE--------------------EEEEEESSEEEST
T ss_pred cEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceE--------------------EEEecCCCCEEee
Confidence 456678888877666667889999999999998887665432 2578999999853
No 321
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=60.21 E-value=13 Score=32.82 Aligned_cols=53 Identities=9% Similarity=-0.011 Sum_probs=38.4
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLI 401 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~ 401 (480)
+....+.+|-+.-.-= -.++.+.+|++|.+++...+++|+...-..+.+||+|
T Consensus 62 ~~~~~~~~ge~i~~~G-~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEG-DPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTT-SCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCC-CCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 3444555555442221 3467899999999999999999986655688999987
No 322
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=60.00 E-value=15 Score=32.52 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=34.8
Q ss_pred ccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCC
Q 048197 234 LFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP 279 (480)
Q Consensus 234 i~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P 279 (480)
+.-.++.+.||..+|++.+++.++.++=.+.|.|-.-.+.+.++.+
T Consensus 143 ~~~~~t~~~lA~~lg~sr~tvsR~l~~L~~~g~I~~~~~~i~i~d~ 188 (202)
T 2zcw_A 143 VVLKATHDELAAAVGSVRETVTKVIGELAREGYIRSGYGKIQLLDL 188 (202)
T ss_dssp EEEECCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEESCH
T ss_pred EccCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeCCCEEEEeCH
Confidence 4456899999999999999998887665556777765556666554
No 323
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=59.89 E-value=12 Score=33.59 Aligned_cols=74 Identities=11% Similarity=0.105 Sum_probs=48.0
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC----C--cEEEEEcCCCCeEEEE
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ----G--FAVVKRASNRGLEWIS 422 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq----g--~~~~~~ag~e~l~~v~ 422 (480)
....+.+|-+.-..= -.++.+.||++|.+++...+++|+...-..+.+||+|-... + +.+...| -++.+++.
T Consensus 35 ~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a-~~~~~v~~ 112 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPG-DPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRT-RTQCELAE 112 (230)
T ss_dssp EEEEECTTCEEECTT-SBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEE-SSCEEEEE
T ss_pred eEEEeCCCCEEECCC-CCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEE-cCcEEEEE
Confidence 344445555442221 24678999999999999999999876667899999984322 1 2223334 34567766
Q ss_pred EE
Q 048197 423 FK 424 (480)
Q Consensus 423 f~ 424 (480)
+.
T Consensus 113 i~ 114 (230)
T 3iwz_A 113 IS 114 (230)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 324
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=59.25 E-value=11 Score=34.09 Aligned_cols=117 Identities=10% Similarity=0.057 Sum_probs=69.8
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC-----CCcEEEEEcCCCCeEEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP-----QGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP-----qg~~~~~~ag~e~l~~v~ 422 (480)
+....+.+|-+.---- -.++.+.||++|.+++...+++|+...-..+.+||+|-.. ..+.+...|- ++.+++.
T Consensus 33 ~~~~~~~~g~~i~~~g-~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~-~~~~v~~ 110 (232)
T 2gau_A 33 IQPFPCKKASTVFSEG-DIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAV-ENSKVLA 110 (232)
T ss_dssp CEEEEECTTCEEECTT-CCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEES-SCEEEEE
T ss_pred CeEEEECCCCEEEeCC-CCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEe-cceEEEE
Confidence 5556667776654332 3467899999999999999998886555689999988321 1233344453 4577776
Q ss_pred EEecC-------CCc--------------------------------ceee---c---cc----cccccCCCHHHHHHHc
Q 048197 423 FKTND-------VAK--------------------------------TSQL---A---GR----ASVIRGLPLDVIQNSF 453 (480)
Q Consensus 423 f~ts~-------~~~--------------------------------~~~L---A---G~----~svl~~lp~eVla~af 453 (480)
+...+ +|. ..+| + |. ..+.-.++.+-||..+
T Consensus 111 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~l 190 (232)
T 2gau_A 111 IPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATLS 190 (232)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHHT
T ss_pred EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHHh
Confidence 64221 110 0011 0 10 1223468999999999
Q ss_pred CCCHHHHHHHHhc
Q 048197 454 QVSRDEAQRLKYN 466 (480)
Q Consensus 454 ~vs~e~~~~l~~~ 466 (480)
|++++.+.++.+.
T Consensus 191 g~sr~tvsR~l~~ 203 (232)
T 2gau_A 191 NMTVSNAIRTLST 203 (232)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999998877654
No 325
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=58.39 E-value=13 Score=33.38 Aligned_cols=73 Identities=8% Similarity=0.035 Sum_probs=47.9
Q ss_pred eeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEE-----CCCcEEEEEcCCCCeEEEEEE
Q 048197 350 KGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVV-----PQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vV-----Pqg~~~~~~ag~e~l~~v~f~ 424 (480)
...+.+|-+.---- -.++.+.+|++|.+++...+++|+...-..+.+||+|-. ...+.+...|- ++.+++.+.
T Consensus 31 ~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~-~~~~v~~i~ 108 (227)
T 3d0s_A 31 PVDFPRGHTVFAEG-EPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI-TEVRAVSMD 108 (227)
T ss_dssp EEEECTTCEEECTT-CCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES-SCEEEEEEE
T ss_pred EEEeCCCCEEEcCC-CcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc-ccEEEEEEe
Confidence 44555555442221 346789999999999999999998766678999999832 12233344443 357777664
No 326
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=58.28 E-value=21 Score=33.22 Aligned_cols=55 Identities=15% Similarity=0.230 Sum_probs=42.6
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
+...++.+|..+...=.....++||++|...+-...+++.+. -+..+.+||+|-.
T Consensus 69 ~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~--------------------~~~~~~~G~~~Ge 123 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM--------------------ILSYLNQGDFIGE 123 (260)
T ss_dssp SEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEE--------------------EEEEEETTCEESC
T ss_pred CEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEE--------------------EEEEcCCCCEEee
Confidence 356788898887666567889999999999998887765442 2578999999853
No 327
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=58.19 E-value=20 Score=30.37 Aligned_cols=53 Identities=8% Similarity=0.007 Sum_probs=38.8
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
+...++.+|..+...=..+..+++|++|...+-. .+++.+ ..+..+.+||+|-
T Consensus 61 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~g~~--------------------~~~~~~~~G~~fG 113 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVG--------------------RCVGNYDNRGSFG 113 (161)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-EETTEE--------------------EEEEEEESCCEEC
T ss_pred cceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEE-cCCCCe--------------------EEEEEcCCCCEec
Confidence 3457888888876666678999999999999887 433322 1257889999773
No 328
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=57.42 E-value=5.5 Score=31.43 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=30.2
Q ss_pred cCCHHHHHhhcCCCHHHHHHhccccccceeEEEec
Q 048197 237 GFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVE 271 (480)
Q Consensus 237 gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~ 271 (480)
..+.+-||+.|+|++.++++....=.++|.|.|++
T Consensus 16 ~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~~ 50 (78)
T 1xn7_A 16 RMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQ 50 (78)
T ss_dssp SBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEEC
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEec
Confidence 45888999999999999999887777789999983
No 329
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=57.39 E-value=32 Score=28.87 Aligned_cols=45 Identities=20% Similarity=0.372 Sum_probs=35.9
Q ss_pred cCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEEc
Q 048197 99 TNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIYN 167 (480)
Q Consensus 99 ~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~N 167 (480)
+.++|++=|+.|...+-+ ||-.+ -..+++||.|.||+..-+-+.-
T Consensus 52 T~~~E~MevvsG~l~V~L--pG~~e----------------------W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 52 SEVAETIRVLSGMAYYHA--EGAND----------------------VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp CSSCEEEEEEEEEEEEEC--TTCSS----------------------CEEEETTCEEEECSSSCEEEEE
T ss_pred CCCcEEEEEEEeEEEEEC--CCCcc----------------------CEEECCCCEEEECCCCcEEEEE
Confidence 369999999999987764 77543 3689999999999998776654
No 330
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=55.43 E-value=15 Score=31.15 Aligned_cols=50 Identities=10% Similarity=0.094 Sum_probs=34.9
Q ss_pred eeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEE
Q 048197 350 KGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLI 401 (480)
Q Consensus 350 ~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~ 401 (480)
...+.+|-+.--. .-.++.+.+|++|.+++.. +.+|+...-..+.+||+|
T Consensus 63 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 63 EKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp EEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred eeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 3444444443221 2347789999999999999 778876555678999976
No 331
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=53.53 E-value=11 Score=40.32 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=26.0
Q ss_pred EeecCCcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 147 RQIREGDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 147 ~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
..=++||.+++++|..||.+|.|-.--+.+.+
T Consensus 340 ~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~ 371 (531)
T 3avr_A 340 FIQRPGDLVWINAGTVHWVQAIGWCNNIAWNV 371 (531)
T ss_dssp EEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred EEECCCCEEEECCCceEEEEecceeeeeEEEe
Confidence 45689999999999999999999754445544
No 332
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=53.42 E-value=32 Score=30.79 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=70.4
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND- 427 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~- 427 (480)
....+.+|-+.---= -.++.+.||++|.+++. .+++|+...-..+.+||+|- ..+.+...|- ++.+++.+...+
T Consensus 24 ~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~-~~~~v~~i~~~~~ 98 (222)
T 1ft9_A 24 RSKIHAKGSLVCTGE-GDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT-ERTEVRFADIRTF 98 (222)
T ss_dssp EEEEECTTCEEECTT-CCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES-SCEEEEEECHHHH
T ss_pred cEEEECCCCEEECCC-CCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc-cceEEEEEeHHHH
Confidence 344445555442211 24678999999999995 88889876666899999998 3344444553 457777764221
Q ss_pred ------CCcc--------------------------------ee---ec---cc-----cccccCCCHHHHHHHcCCCHH
Q 048197 428 ------VAKT--------------------------------SQ---LA---GR-----ASVIRGLPLDVIQNSFQVSRD 458 (480)
Q Consensus 428 ------~~~~--------------------------------~~---LA---G~-----~svl~~lp~eVla~af~vs~e 458 (480)
+|.. .+ ++ |. ..+.-.++.+-||..+|++++
T Consensus 99 ~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~sr~ 178 (222)
T 1ft9_A 99 EQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSSRQ 178 (222)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSCHH
T ss_pred HHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCcHH
Confidence 2210 00 11 00 012235899999999999999
Q ss_pred HHHHHHhc
Q 048197 459 EAQRLKYN 466 (480)
Q Consensus 459 ~~~~l~~~ 466 (480)
++.++.+.
T Consensus 179 tvsR~l~~ 186 (222)
T 1ft9_A 179 TTSTALNS 186 (222)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877553
No 333
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=52.39 E-value=19 Score=32.27 Aligned_cols=113 Identities=13% Similarity=0.133 Sum_probs=71.3
Q ss_pred EeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEEecC-
Q 048197 349 EKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTND- 427 (480)
Q Consensus 349 ~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ts~- 427 (480)
....+.+|-+.---= -.++.+.||++|.+++ ..+++|+...-..+.+||+|-.|.. +...|- ++.+++.+...+
T Consensus 28 ~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~-~~~~~G~~~~~~~~~~G~~~G~~~~--~~~~A~-~~~~v~~i~~~~~ 102 (220)
T 2fmy_A 28 REQRYSKKAILYTPN-TERNLVFLVKSGRVRV-YLAYEDKEFTLAILEAGDIFCTHTR--AFIQAM-EDTTILYTDIRNF 102 (220)
T ss_dssp EEEEECTTCEEECTT-CSSCEEEEEEESEEEE-EEECSSCEEEEEEEETTCEEESCSS--SEEEES-SSEEEEEEEHHHH
T ss_pred heeEeCCCCEEECCC-CCCCeEEEEEecEEEE-EECCCCCEEEEEEcCCCCEeCCccc--eEEEEc-CcEEEEEEeHHHH
Confidence 344555555542211 2467899999999999 5888898766668999999877433 333443 457777765321
Q ss_pred ------CCcc--------------------------------eee---c---cc-----cccccCCCHHHHHHHcCCCHH
Q 048197 428 ------VAKT--------------------------------SQL---A---GR-----ASVIRGLPLDVIQNSFQVSRD 458 (480)
Q Consensus 428 ------~~~~--------------------------------~~L---A---G~-----~svl~~lp~eVla~af~vs~e 458 (480)
+|.. .+| + |. ..+.-.++.+.||..+|++++
T Consensus 103 ~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~sr~ 182 (220)
T 2fmy_A 103 QNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTTRQ 182 (220)
T ss_dssp HHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSCHH
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCcHH
Confidence 2210 000 0 00 013346899999999999999
Q ss_pred HHHHHHhc
Q 048197 459 EAQRLKYN 466 (480)
Q Consensus 459 ~~~~l~~~ 466 (480)
.+.++.+.
T Consensus 183 tvsR~l~~ 190 (220)
T 2fmy_A 183 TVSVLLND 190 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877554
No 334
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=52.11 E-value=18 Score=33.66 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=50.5
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC------CcEEEEEcCCCCeEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ------GFAVVKRASNRGLEWI 421 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq------g~~~~~~ag~e~l~~v 421 (480)
+....+.+|.+...-= -.++.+.||++|.+++...+++|+...-..+.+||+|-... .+.+...|- ++++++
T Consensus 69 ~~~~~~~~ge~i~~~G-~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~-~~~~l~ 146 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQG-EKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK-TACEVA 146 (260)
T ss_dssp SEEEEECTTCEEECTT-CBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEES-SCEEEE
T ss_pred CEEEEECCCCEEECCC-CcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEEC-CCeEEE
Confidence 4455666666653322 34678999999999999999999876667899999984322 122333443 457777
Q ss_pred EEE
Q 048197 422 SFK 424 (480)
Q Consensus 422 ~f~ 424 (480)
.+.
T Consensus 147 ~i~ 149 (260)
T 3kcc_A 147 EIS 149 (260)
T ss_dssp EEE
T ss_pred EEc
Confidence 664
No 335
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=50.94 E-value=8.7 Score=40.69 Aligned_cols=32 Identities=25% Similarity=0.434 Sum_probs=25.4
Q ss_pred EeecCCcEEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 147 RQIREGDLVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 147 ~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
..=++||.+++++|..||..|.|-.-=+...+
T Consensus 315 ~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNv 346 (510)
T 4ask_A 315 FVQRPGDLVWINAGTVHWVQATGWCNNIAWNV 346 (510)
T ss_dssp EEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred EEECCCCEEEECCCceEEEEecCeeeeeEEEe
Confidence 45689999999999999999999744444444
No 336
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=50.56 E-value=13 Score=38.19 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=27.3
Q ss_pred EeecCCcEEEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCc
Q 048197 147 RQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDN 186 (480)
Q Consensus 147 ~~l~~GDV~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~n 186 (480)
..-..||.|+||+|.+|-+.|..+ .+-|+ .|.-++.|
T Consensus 295 ~~Q~~GeavfiPaG~~HQV~Nl~~--~i~va-~df~spe~ 331 (392)
T 2ypd_A 295 LIQFLGDAIVLPAGALHQVQNFHS--CIQVT-EDFVSPEH 331 (392)
T ss_dssp EEEETTCEEEECTTCEEEEEESSE--EEEEE-EEECCGGG
T ss_pred EEEcCCCEEEecCCCHHHHhcccc--hhhHh-hhhcChhh
Confidence 355899999999999999999875 33333 35556554
No 337
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=50.52 E-value=73 Score=31.03 Aligned_cols=83 Identities=13% Similarity=0.121 Sum_probs=62.7
Q ss_pred CCeEEEEEecCCCCcccccceeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC
Q 048197 326 RGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ 405 (480)
Q Consensus 326 ~~G~i~~~~~~~~P~L~~l~lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq 405 (480)
..|..+.++- .+-|-|-.+|.+.|+=-+.|--|.--.| .||++|+..+ |.+ ++.+|.-.++|+
T Consensus 77 ~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~------G~~----~l~~h~Y~f~Pa 139 (303)
T 2qdr_A 77 APGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQL------GEW----QLNKHSYSFIPA 139 (303)
T ss_dssp CCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEE------TTE----EECTTEEEEECT
T ss_pred Cccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEe------CCE----EecCCceEEecC
Confidence 4677777764 2346777888998888888888755556 9999998764 333 478999999999
Q ss_pred CcE--EEEEcCCCCeEEEEEEe
Q 048197 406 GFA--VVKRASNRGLEWISFKT 425 (480)
Q Consensus 406 g~~--~~~~ag~e~l~~v~f~t 425 (480)
|-. .+++-|+++.+++-|..
T Consensus 140 GV~~~~~kv~~~~g~~iL~fe~ 161 (303)
T 2qdr_A 140 GVRIGSWKVLGGEEAEILWMEN 161 (303)
T ss_dssp TCCBCCEEEETTSCEEEEEEEC
T ss_pred CCccCceeecCCCCcEEEEEec
Confidence 974 56666888899888843
No 338
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=50.20 E-value=30 Score=31.53 Aligned_cols=55 Identities=7% Similarity=0.186 Sum_probs=40.1
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeC
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALP 158 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iP 158 (480)
+...++.+|.++...-..++.+++|++|...+-...+.+.+. -+..+ +||+|-..
T Consensus 18 ~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~--------------------~~~~~-~G~~~Ge~ 72 (238)
T 2bgc_A 18 IKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIM--------------------NLQYY-KGAFVIMS 72 (238)
T ss_dssp CCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEE--------------------EEEEE-ESSEEEES
T ss_pred ceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEE--------------------EEEEc-CCCEecch
Confidence 345678888887655556889999999999998887765432 14556 89998654
No 339
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=50.12 E-value=23 Score=34.91 Aligned_cols=72 Identities=17% Similarity=0.165 Sum_probs=45.3
Q ss_pred eeEEeeeeccccccccccccCCceEEEEEEeeEEEEEEec--CC------ceEEeeecCCccEEEECCCcEEEEEc-CCC
Q 048197 346 LSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAE--NG------ENVFDGQIREGQLIVVPQGFAVVKRA-SNR 416 (480)
Q Consensus 346 lsa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~--~G------~~~f~~~l~~GdV~vVPqg~~~~~~a-g~e 416 (480)
|.+.|+.|.|||...||--+ -+..+...|..|+.|--. .+ ...+ .+++|+++++=...+|+..| |++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~--~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDTVI--HMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTEEE--CCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCEEE--ecCCCCEEEEcCCCeeEEEcCCCC
Confidence 36788899999999999754 344445567766665422 11 1233 68999999999999999755 553
Q ss_pred -CeEEE
Q 048197 417 -GLEWI 421 (480)
Q Consensus 417 -~l~~v 421 (480)
...++
T Consensus 167 ~RIhLv 172 (290)
T 1e5r_A 167 SRQSLC 172 (290)
T ss_dssp CCCEEE
T ss_pred CeEEEE
Confidence 34443
No 340
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=49.59 E-value=20 Score=32.66 Aligned_cols=75 Identities=9% Similarity=0.160 Sum_probs=47.8
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECCCc-------EEEEEcCCCCeEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGF-------AVVKRASNRGLEW 420 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~-------~~~~~ag~e~l~~ 420 (480)
+....+.+|-+.---- -.++.+.+|++|.+++...+++|+...-..+ +||+|--..-+ .+...+-.++.++
T Consensus 18 ~~~~~~~~ge~i~~~G-~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~~v 95 (238)
T 2bgc_A 18 IKPKQFHKKELIFNQW-DPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQATA 95 (238)
T ss_dssp CCCEEEETTCEEECTT-CCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECSSEEEE
T ss_pred ceEEEECCCCEEEeCC-CCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEEcceEE
Confidence 3444555665552211 2467899999999999999999986555567 99998544211 2333332246777
Q ss_pred EEEE
Q 048197 421 ISFK 424 (480)
Q Consensus 421 v~f~ 424 (480)
+.+.
T Consensus 96 ~~i~ 99 (238)
T 2bgc_A 96 YVIK 99 (238)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7775
No 341
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=47.77 E-value=6.6 Score=31.76 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=30.2
Q ss_pred cCCHHHHHhhcCCCHHHHHHhccccccceeEEEec
Q 048197 237 GFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVE 271 (480)
Q Consensus 237 gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~ 271 (480)
..+..-||+.|+|+..++++....=.++|.|.|+.
T Consensus 16 ~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 16 RMEAKQLSARLQTPQPLIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp SEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 35788999999999999999887777779999885
No 342
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=47.37 E-value=13 Score=33.37 Aligned_cols=47 Identities=19% Similarity=0.309 Sum_probs=34.8
Q ss_pred cccccCCHHHHHhhcCCCHHHHHHhccccccceeEEEeccceeccCC
Q 048197 233 NLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP 279 (480)
Q Consensus 233 ni~~gf~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~l~~~~P 279 (480)
.+.-.++.+-||..+|++++++.++.++=.+.|.|-.-.+.+.++.+
T Consensus 174 ~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I~~~~~~i~i~d~ 220 (227)
T 3dkw_A 174 RVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDR 220 (227)
T ss_dssp CCCCCSCTHHHHHHTTSCHHHHHHHHHHHHHHTSEEESSSCEEESCS
T ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHCCcEEecCCEEEEeCH
Confidence 35556889999999999999998887666556777654455666554
No 343
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=46.52 E-value=1e+02 Score=28.47 Aligned_cols=70 Identities=11% Similarity=0.180 Sum_probs=47.2
Q ss_pred eEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecC-CceE-E---eeecCCccEEEECCCcEEEEEc-CCCCeEE
Q 048197 347 SAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAEN-GENV-F---DGQIREGQLIVVPQGFAVVKRA-SNRGLEW 420 (480)
Q Consensus 347 sa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~-G~~~-f---~~~l~~GdV~vVPqg~~~~~~a-g~e~l~~ 420 (480)
+|....|.||+-..||..|....+ +..+.++.|. +-.. + ....++|.++++=-.|.|...| +++ -.+
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~l------R~HL~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~-~Rv 175 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRL------RMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASS-FRL 175 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEE------EEEEEEECCSSSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSS-CEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeE------EEEEEEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCC-CEE
Confidence 577889999999999999865544 2334444443 2110 0 1268999999999999999755 444 444
Q ss_pred EEE
Q 048197 421 ISF 423 (480)
Q Consensus 421 v~f 423 (480)
+-+
T Consensus 176 vL~ 178 (197)
T 3rcq_A 176 IFI 178 (197)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 344
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=45.76 E-value=96 Score=30.30 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=47.4
Q ss_pred ceeEEeeeeccccc---cccccccCCceEEEEEE----eeEEEEEEecCCc-eEEeeecCCccEEEECCCcEEEEEcCCC
Q 048197 345 QLSAEKGNLYQNAM---MAPHWNLNAHSVVYITR----GNGRMQIVAENGE-NVFDGQIREGQLIVVPQGFAVVKRASNR 416 (480)
Q Consensus 345 ~lsa~~v~L~pgam---~~PHwh~nA~ei~yV~~----G~grv~vv~~~G~-~~f~~~l~~GdV~vVPqg~~~~~~ag~e 416 (480)
.+-+..-.|+|||. +.||-|=+-.|..|.-+ | ..++++..... +-+ .|+-||++++|..++|.- .|-+
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~g-fv~q~~g~p~Etrhi--~V~n~daVlvP~wh~h~~-~G~~ 254 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDA-CVFHMMGQPQETRHI--VMHNEQAVISPSWSIHSG-VGTK 254 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTC-CEEEEEEETTEEEEE--EECSSEEEEECTTCEEEE-EESS
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCC-EEEEEeCCCCCeeEE--EEECCCEEEeCCCCCCCC-CCcc
Confidence 35566677888875 68999977777777765 3 34454443222 222 589999999995455552 3543
Q ss_pred C--eEEEEEE
Q 048197 417 G--LEWISFK 424 (480)
Q Consensus 417 ~--l~~v~f~ 424 (480)
. +-|+.-.
T Consensus 255 ~Y~ylwvMAG 264 (282)
T 1xru_A 255 AYTFIWGMVG 264 (282)
T ss_dssp CCEEEEEEEE
T ss_pred ceEEEEEEEc
Confidence 4 4444443
No 345
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=45.64 E-value=90 Score=30.45 Aligned_cols=38 Identities=11% Similarity=0.157 Sum_probs=27.2
Q ss_pred ccCeeEEEEEEcCCeee-cCcccCCCeEEEEEeceEEEE
Q 048197 78 CANVAVFRHRIQQRGLV-VPSYTNTPELFYVVQGRGIHG 115 (480)
Q Consensus 78 ~~gvs~~r~~i~p~gl~-lPh~~~a~el~yV~~G~g~~g 115 (480)
...+.+..++|+||+-+ +|--....-++||++|++.++
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~ 204 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG 204 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC
Confidence 34678888999999843 333223457899999998873
No 346
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=44.40 E-value=1.8e+02 Score=26.25 Aligned_cols=96 Identities=9% Similarity=0.030 Sum_probs=59.5
Q ss_pred cC-CceE-EEeCCCC-------hhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceE-EEEEEcCCCccchhhhhh
Q 048197 61 SE-AGVT-EFWDQND-------EQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRG-IHGAVFPGCPETYQESQQ 130 (480)
Q Consensus 61 se-~G~~-e~~~~~~-------~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g-~~g~v~pg~~etf~~~~~ 130 (480)
.| ||.+ |+|.... ..-+ ...+....-|.++...--|-.+++|+-|-..|.. .+-++.|++.-.
T Consensus 25 PEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~------ 97 (172)
T 3loi_A 25 PASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYS------ 97 (172)
T ss_dssp TTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCCEEEEECSSEEEEEEEEESCEEEEEECTTSCEE------
T ss_pred CcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCCccCEEecCCEEEEEEcCCCEEEEEEcCCCceE------
Confidence 45 9988 4564321 1112 2346667788888844333346999999999975 788888865310
Q ss_pred ccccccccccccccee-EeecCCc---EEEeCCCCEEEEEcCCCCcEEEEEE
Q 048197 131 RSSESQSRSQDQHQKV-RQIREGD---LVALPTGSANWIYNDGPSELVVVAL 178 (480)
Q Consensus 131 ~~~~~~~~~~d~~qk~-~~l~~GD---V~~iPaG~~h~~~N~G~~~l~~v~~ 178 (480)
..++ .++..|+ .++||+|+-+-..- ....+|+.
T Consensus 98 ------------~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~---~~~~LVsc 134 (172)
T 3loi_A 98 ------------CSILGNPLEHPEARHQVVVPRRVWFAQEV---DGYCLASV 134 (172)
T ss_dssp ------------EEEESCTTTSTTCBSEEEECTTCEEEEEE---SSEEEEEE
T ss_pred ------------EEEeCCCcccCCcceEEEECCCEEEEEEe---CCcEEEEE
Confidence 0012 2677888 78999998555554 34555543
No 347
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=42.12 E-value=12 Score=33.58 Aligned_cols=117 Identities=14% Similarity=0.158 Sum_probs=71.0
Q ss_pred EEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEECC-----C-cEEEEEcCCCCeEEE
Q 048197 348 AEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQ-----G-FAVVKRASNRGLEWI 421 (480)
Q Consensus 348 a~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPq-----g-~~~~~~ag~e~l~~v 421 (480)
+....+.+|-+.-..= -.++.+.||++|.+++...+++|+...-..+.+||+|-... . +.+...|. ++.+++
T Consensus 32 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~-~~~~v~ 109 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQG-EPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAV-VPSQLF 109 (227)
T ss_dssp CEEEECCTTEEEECTT-SBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEES-SCCEEE
T ss_pred CEEEEECCCCEEEcCC-CccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc-CcEEEE
Confidence 3445555555543322 34678999999999999999988765556789999884322 1 22233343 346666
Q ss_pred EEEec-------CCCcc--------------------------------eee---cc-----ccccccCCCHHHHHHHcC
Q 048197 422 SFKTN-------DVAKT--------------------------------SQL---AG-----RASVIRGLPLDVIQNSFQ 454 (480)
Q Consensus 422 ~f~ts-------~~~~~--------------------------------~~L---AG-----~~svl~~lp~eVla~af~ 454 (480)
.+... .+|.. .+| +- ...+.-.++.+-||..+|
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~lg 189 (227)
T 3dkw_A 110 RFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHLS 189 (227)
T ss_dssp EEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHHTT
T ss_pred EEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHHhC
Confidence 66432 12210 000 00 001233578899999999
Q ss_pred CCHHHHHHHHhc
Q 048197 455 VSRDEAQRLKYN 466 (480)
Q Consensus 455 vs~e~~~~l~~~ 466 (480)
++++++.++.+.
T Consensus 190 ~sr~tvsR~l~~ 201 (227)
T 3dkw_A 190 IQPETFSRIMHR 201 (227)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999998887653
No 348
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=41.33 E-value=1.1e+02 Score=29.63 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=54.5
Q ss_pred cCCceEEEeCCCChhccccCeeEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccc
Q 048197 61 SEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQ 140 (480)
Q Consensus 61 se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~ 140 (480)
+..|.+...++.+..+. -+.+..+.|++|.-+.-.--+....+..+.|++.+.+- | ++|+.- +.| .
T Consensus 11 ~~~g~~~~itp~~a~~~--y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~--g--~~~~~~-------g~R-~ 76 (270)
T 2qjv_A 11 SESGNIQHISPQNAGWE--YVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAA--D--SFFYRI-------GQR-M 76 (270)
T ss_dssp CSSEEEEEECHHHHTSS--SCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEET--T--EEEEEE-------CCC-S
T ss_pred cCCCCEEEeCCCCCCcE--EeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEEC--C--EEEecc-------ccc-c
Confidence 45666655665444343 46677889999885433333445556778899988861 2 333110 000 0
Q ss_pred cccceeEeecCCcEEEeCCCCEEEEEcCCCCcE
Q 048197 141 DQHQKVRQIREGDLVALPTGSANWIYNDGPSEL 173 (480)
Q Consensus 141 d~~qk~~~l~~GDV~~iPaG~~h~~~N~G~~~l 173 (480)
.+++=.+.|.++||.|...-+....+.++
T Consensus 77 ----svF~~~~p~~lYvp~g~~v~i~a~~~~~~ 105 (270)
T 2qjv_A 77 ----SPFERIPAYSVYLPHHTEAXVTAETDLEL 105 (270)
T ss_dssp ----SGGGCSCCCEEEECSSCCEEEEESSSEEE
T ss_pred ----ccccCCCCcEEEECCCCEEEEEecCCceE
Confidence 02221235999999999777766554333
No 349
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=41.20 E-value=71 Score=29.66 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=40.4
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+....+.+|-.....-..++.+++|++|+..+....+++.+ ...+..+.+||+|
T Consensus 180 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~-------------------~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEE-------------------FVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSC-------------------EEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCc-------------------cEEEEEeCCCCEe
Confidence 45667888888776666788999999999998876554321 1236899999998
No 350
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=40.16 E-value=59 Score=28.67 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=26.1
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHG 115 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g 115 (480)
+....+.||-.+...-..++.++||++|...+-
T Consensus 95 ~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~ 127 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVL 127 (202)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEECEEEEE
T ss_pred CCceEECCCCEEEECCCcCCeEEEEeccEEEEE
Confidence 456688888887766666889999999998773
No 351
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=39.44 E-value=58 Score=31.16 Aligned_cols=51 Identities=10% Similarity=0.034 Sum_probs=39.3
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...++++|-.+...=.....+++|++|...+-...+++.+ .+..+.+||+|
T Consensus 37 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~---------------------~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVA---------------------IIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCE---------------------EEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcE---------------------EEEEecCCCEe
Confidence 4567788877666556688999999999999877665432 36789999988
No 352
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=38.44 E-value=1.7e+02 Score=25.12 Aligned_cols=64 Identities=16% Similarity=0.108 Sum_probs=43.5
Q ss_pred cCCeeecCc---ccCCC--eEEEEEeceEEEEEEcC-CCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCE
Q 048197 89 QQRGLVVPS---YTNTP--ELFYVVQGRGIHGAVFP-GCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSA 162 (480)
Q Consensus 89 ~p~gl~lPh---~~~a~--el~yV~~G~g~~g~v~p-g~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~ 162 (480)
-|.+++.+| .+.+. ..+-|++|+..+-.... |.++. .+..-..+|+...||++.-
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~-------------------~~~~l~~~~~~~~i~Pq~w 82 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEP-------------------DQVILIEAGQFAVFPPEKW 82 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSC-------------------SEEEEEEBTBEEECCSSCE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcce-------------------eEEEEeCCCCceEECCCCc
Confidence 366777777 55554 45789999987765433 32110 1235678999999999999
Q ss_pred EEEEc-CCCC
Q 048197 163 NWIYN-DGPS 171 (480)
Q Consensus 163 h~~~N-~G~~ 171 (480)
|-+.- ++|.
T Consensus 83 H~Ve~lsdd~ 92 (127)
T 3bb6_A 83 HNIEAMTDDT 92 (127)
T ss_dssp EEEEESSTTC
T ss_pred EEEEEcCCCE
Confidence 99986 4443
No 353
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=38.24 E-value=59 Score=28.48 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=36.5
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+....+.||-.....=..++.++||++|...+-. +++. .+..+.+||+|
T Consensus 94 ~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~--~~g~----------------------~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIM--SDGV----------------------IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSCCSEEEEEEECCEEEEC--TTSC----------------------EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEe--cCCe----------------------EEEEecCCCEe
Confidence 4567888888776665668899999999988754 3221 26789999987
No 354
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=37.03 E-value=77 Score=26.37 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=27.2
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGA 116 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~ 116 (480)
+...++.+|-++...=..++.+++|++|...+-.
T Consensus 61 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~ 94 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV 94 (154)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE
T ss_pred ceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE
Confidence 4457888888876665678999999999998864
No 355
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=34.73 E-value=23 Score=28.90 Aligned_cols=31 Identities=13% Similarity=0.238 Sum_probs=23.5
Q ss_pred EEEEcCCeeecCcccCCCeEEEEEeceEEEE
Q 048197 85 RHRIQQRGLVVPSYTNTPELFYVVQGRGIHG 115 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g 115 (480)
..++.+|-.+...-..+..++||++|...+-
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~ 61 (137)
T 1wgp_A 31 PCLFTEKSYLVREGDPVNEMLFIIRGRLESV 61 (137)
T ss_dssp CCCBCTTEEEECTTSBCSEEEEEEECCCEEE
T ss_pred EEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE
Confidence 4567777776655566889999999999853
No 356
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=33.66 E-value=75 Score=25.82 Aligned_cols=31 Identities=3% Similarity=0.054 Sum_probs=24.8
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIH 114 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~ 114 (480)
...++.+|-.+...=..+..+++|++|...+
T Consensus 47 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 77 (139)
T 3ocp_A 47 YPVEYGKDSCIIKEGDVGSLVYVMEDGKVEV 77 (139)
T ss_dssp EEEEECSSCEEECTTSCCCEEEEEEECCEEE
T ss_pred EEEecCCCCEEEeCCCcCCEEEEEEeCEEEE
Confidence 4567788877766556788999999999988
No 357
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=33.39 E-value=96 Score=25.57 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=35.9
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
...++.+|..+...=..++.++||++|...+-. . + +.+..+.+||++--
T Consensus 51 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~---~--------------------~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ--D---D--------------------EVVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEE--T---T--------------------EEEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE--C---C--------------------EEEEEecCCCEeCc
Confidence 456777887776665678999999999998854 1 1 12578999998843
No 358
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=33.26 E-value=83 Score=29.06 Aligned_cols=90 Identities=10% Similarity=0.058 Sum_probs=47.1
Q ss_pred EEEEcCCeeecCcccCCC---eEEEEEec--eEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEeCC
Q 048197 85 RHRIQQRGLVVPSYTNTP---ELFYVVQG--RGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPT 159 (480)
Q Consensus 85 r~~i~p~gl~lPh~~~a~---el~yV~~G--~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPa 159 (480)
....++|+...+|.|... -++|+-.. .|.+.+..|.....+-.+.. +.+............-++||++++|+
T Consensus 107 ~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~---~~~~~~~~~~~~~i~P~~G~lvlFpS 183 (216)
T 2rg4_A 107 INILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTR---RKGAREELRTFRSVAPKVGDVLLWES 183 (216)
T ss_dssp EEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCC---CCCSCGGGCSEEEECCCTTEEEEEET
T ss_pred EEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcc---cccCcccCCCeeEecCCCCeEEEECC
Confidence 346688999999998533 44566542 34455544422100000000 00000000001135789999999999
Q ss_pred CCEEEEEcC-CCCcEEEEE
Q 048197 160 GSANWIYND-GPSELVVVA 177 (480)
Q Consensus 160 G~~h~~~N~-G~~~l~~v~ 177 (480)
-..|...=. ++++-+-|+
T Consensus 184 ~l~H~V~p~~~~~~RiSIs 202 (216)
T 2rg4_A 184 WLRHEVPMNMAEEDRISVS 202 (216)
T ss_dssp TSCEEECCCCSSSCEEEEE
T ss_pred CCEEeccCCCCCCCEEEEE
Confidence 999999653 444444444
No 359
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=30.25 E-value=80 Score=29.52 Aligned_cols=53 Identities=11% Similarity=0.148 Sum_probs=38.7
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEc-CCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVF-PGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~-pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+....+.+|-.+...-..++.+++|++|...+-... +.+.+ ..+..+.+||+|
T Consensus 180 ~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~--------------------~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDP--------------------VFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCC--------------------EEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcc--------------------eEEEEcCCCCEe
Confidence 355677888877666566889999999999988765 22221 136789999988
No 360
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=29.19 E-value=1.2e+02 Score=27.93 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=28.5
Q ss_pred CCceEEEEEEeeEEEEEEecCCc-eEEeeecCCccEE
Q 048197 366 NAHSVVYITRGNGRMQIVAENGE-NVFDGQIREGQLI 401 (480)
Q Consensus 366 nA~ei~yV~~G~grv~vv~~~G~-~~f~~~l~~GdV~ 401 (480)
.++.+.+|++|++++....++|. ...-..+.+||+|
T Consensus 197 ~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 197 PGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 46789999999999998877663 3344589999988
No 361
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=28.34 E-value=2e+02 Score=26.67 Aligned_cols=68 Identities=13% Similarity=0.196 Sum_probs=44.1
Q ss_pred eeEEEEEEcCCe-eecCcccCCCeEEEEEeceEEEEEEcCCCc-cchhhhhhccccccccccccccee-EeecCCc--EE
Q 048197 81 VAVFRHRIQQRG-LVVPSYTNTPELFYVVQGRGIHGAVFPGCP-ETYQESQQRSSESQSRSQDQHQKV-RQIREGD--LV 155 (480)
Q Consensus 81 vs~~r~~i~p~g-l~lPh~~~a~el~yV~~G~g~~g~v~pg~~-etf~~~~~~~~~~~~~~~d~~qk~-~~l~~GD--V~ 155 (480)
.+.+..-|.+++ +.--|-.+++|+-|...|.+..-++.|++. +++ ++ .++..|. -+
T Consensus 79 ~TaIYfLL~~~~~~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~-------------------~LG~dl~~Ge~pQ~ 139 (203)
T 1xe7_A 79 STLIYYLLTPDSPIGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSF-------------------KVGFDYKNGEVSQW 139 (203)
T ss_dssp CEEEEEEEBTTBCEEEEEEESSCEEEEEEEECEEEEEECTTSCEEEE-------------------EESSCGGGTCBSEE
T ss_pred eeEEEEEEcCCCCcccceeeCCCEEEEEEcCCccEEEEcCCCCEEEE-------------------EeCCCcccCcccEE
Confidence 455556688886 443333479999999999887767777643 111 11 2455565 48
Q ss_pred EeCCCCEEEEEc
Q 048197 156 ALPTGSANWIYN 167 (480)
Q Consensus 156 ~iPaG~~h~~~N 167 (480)
+||+|+-+-..-
T Consensus 140 vVPaG~WqaA~~ 151 (203)
T 1xe7_A 140 VVPGGVFKASFL 151 (203)
T ss_dssp EECTTCEEEEEE
T ss_pred EEcCCEEEEeEe
Confidence 999998665544
No 362
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=28.21 E-value=17 Score=29.77 Aligned_cols=35 Identities=20% Similarity=0.439 Sum_probs=25.5
Q ss_pred CCceEEEEEEeeEEEEEEecCCceEEee--ecCCccEE
Q 048197 366 NAHSVVYITRGNGRMQIVAENGENVFDG--QIREGQLI 401 (480)
Q Consensus 366 nA~ei~yV~~G~grv~vv~~~G~~~f~~--~l~~GdV~ 401 (480)
.++.+.||++|.+++. .+++|+...-. .+.+||+|
T Consensus 46 ~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 46 PVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp BCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred CCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 4678999999999954 56677653223 68899976
No 363
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=27.66 E-value=41 Score=36.22 Aligned_cols=38 Identities=13% Similarity=0.390 Sum_probs=33.1
Q ss_pred CceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC
Q 048197 367 AHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP 404 (480)
Q Consensus 367 A~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP 404 (480)
+|-=.|.+...|.|.|++.+|+.++...|.+||+|-.-
T Consensus 422 SHdKTFei~~~G~v~vvd~~G~vl~eh~Ve~GDIwRmc 459 (741)
T 1itw_A 422 SHDKTFQIPADGVVRVTDESGKLLLEQSVEAGDIWRMC 459 (741)
T ss_dssp CGGGEEECSSSEEEEEEETTCCEEEEEEECTTCEEEEE
T ss_pred CCCcceECCCCceEEEEeCCCCEEEEccccCCcchhhh
Confidence 45567889999999999999999999999999998643
No 364
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=27.35 E-value=78 Score=25.47 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=26.2
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHG 115 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g 115 (480)
...++.+|..+...-..++.+++|++|...+.
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~ 66 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEPGDRMFFVVEGSVSVA 66 (138)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESCEEEC
T ss_pred cEEEeCCCCEEEeCCCCcceEEEEEeeEEEEE
Confidence 45688888887766667889999999999884
No 365
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=27.27 E-value=68 Score=30.63 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=29.8
Q ss_pred CCceEEEEEEeeEEEEEEecCCceEEeeecCCccEE
Q 048197 366 NAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLI 401 (480)
Q Consensus 366 nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~ 401 (480)
.++.+.+|++|.+++...+++|+. .-..+.+||+|
T Consensus 53 ~~~~~y~i~~G~v~~~~~~~~g~~-~~~~~~~G~~f 87 (333)
T 4ava_A 53 PAVSFLLISSGSAEVSHVGDDGVA-IIARALPGMIV 87 (333)
T ss_dssp BCCCEEEEEECCEEEEEECTTCCE-EEEEECTTCEE
T ss_pred cCCEEEEEEeeEEEEEEECCCCcE-EEEEecCCCEe
Confidence 367899999999999999999986 34578999988
No 366
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=27.06 E-value=51 Score=30.93 Aligned_cols=36 Identities=17% Similarity=0.301 Sum_probs=29.1
Q ss_pred CCceEEEEEEeeEEEEEEe-cCCceEEeeecCCccEE
Q 048197 366 NAHSVVYITRGNGRMQIVA-ENGENVFDGQIREGQLI 401 (480)
Q Consensus 366 nA~ei~yV~~G~grv~vv~-~~G~~~f~~~l~~GdV~ 401 (480)
.++.+.+|++|.+++...+ ++|+...-..+.+||+|
T Consensus 197 ~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 197 RGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred CCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 3568889999999999888 57775555689999988
No 367
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=27.02 E-value=41 Score=36.18 Aligned_cols=38 Identities=16% Similarity=0.392 Sum_probs=33.1
Q ss_pred CceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC
Q 048197 367 AHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP 404 (480)
Q Consensus 367 A~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP 404 (480)
+|-=.|.+...|.|.|++.+|+.++...|.+||+|-.-
T Consensus 418 SHdKTFei~~~G~v~vvd~~G~vl~eh~Ve~GDIwRmc 455 (738)
T 2b0t_A 418 SHDKTFRIEADGVVQVVSSNGDVLIEHDVEANDIWRAC 455 (738)
T ss_dssp CGGGEEECCSSEEEEEECTTSCEEEEEEECTTCEEEEE
T ss_pred CCCcceECCCCceEEEEeCCCCEEEeccccCCcchhhh
Confidence 55567889999999999999999999999999998643
No 368
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=25.38 E-value=1.2e+02 Score=30.42 Aligned_cols=57 Identities=5% Similarity=-0.028 Sum_probs=41.8
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEEe
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVAL 157 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~i 157 (480)
+...++.+|..+...-..++.++||++|...+-...+++.+ ....+..+.+||+|--
T Consensus 65 ~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~------------------~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQ------------------DAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGG------------------GCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCC------------------cceEEEEccCCCCcch
Confidence 34568888887766666789999999999999877665421 0123679999999854
No 369
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=25.35 E-value=3.1e+02 Score=23.21 Aligned_cols=65 Identities=14% Similarity=0.098 Sum_probs=44.1
Q ss_pred CCeeecCcccCCCeE--EEEEeceEEEEEEcC-CCccchhhhhhcccccccccccccceeEeecCCcEEEeCCCCEEEEE
Q 048197 90 QRGLVVPSYTNTPEL--FYVVQGRGIHGAVFP-GCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVALPTGSANWIY 166 (480)
Q Consensus 90 p~gl~lPh~~~a~el--~yV~~G~g~~g~v~p-g~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~iPaG~~h~~~ 166 (480)
|.+|+-.|-+.+..| +-|++|+..+-.... |.++. .+..-+.+|+.-+||+...|-+.
T Consensus 25 P~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~-------------------~~~~~~~~~~~~~i~Pq~wHrVe 85 (119)
T 3dl3_A 25 PEALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEP-------------------EIKVVINAGQFATSPPQYWHRIE 85 (119)
T ss_dssp CHHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSC-------------------SEEEEEETTEEEEECTTCEEEEE
T ss_pred hHHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcc-------------------cEEEEeCCCCCceeCCCceEEEE
Confidence 344555666666655 579999988876542 22110 12457889999999999999999
Q ss_pred cCCCCcE
Q 048197 167 NDGPSEL 173 (480)
Q Consensus 167 N~G~~~l 173 (480)
-++|-.+
T Consensus 86 ~sdD~~f 92 (119)
T 3dl3_A 86 LSDDAQF 92 (119)
T ss_dssp ECTTCEE
T ss_pred ECCCeEE
Confidence 6566544
No 370
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=25.02 E-value=76 Score=25.64 Aligned_cols=33 Identities=3% Similarity=0.125 Sum_probs=24.2
Q ss_pred EEEEEEc-CCeeecCcccCCCeEEEEEeceEEEE
Q 048197 83 VFRHRIQ-QRGLVVPSYTNTPELFYVVQGRGIHG 115 (480)
Q Consensus 83 ~~r~~i~-p~gl~lPh~~~a~el~yV~~G~g~~g 115 (480)
+...++. +|-++.-.-..+..++||++|...+-
T Consensus 39 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~ 72 (134)
T 2d93_A 39 MIFEVVEQAGAIILEDGQELDSWYVILNGTVEIS 72 (134)
T ss_dssp EEEEEECSSSCEEECTTCEECEEEECCBSCEEEE
T ss_pred heEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEE
Confidence 3456777 77766555455788999999999875
No 371
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=24.68 E-value=32 Score=26.92 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=27.5
Q ss_pred CCHHHHHhhcCCCHHHHHHhccccccceeEEEeccc
Q 048197 238 FDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEE 273 (480)
Q Consensus 238 f~~~~La~af~v~~~~~~kl~~~~~~rg~Iv~v~~~ 273 (480)
.+.+-||++|||+..+|++-...=.+.|+|.+..++
T Consensus 25 psv~EIa~~lgvS~~TVrr~L~~Le~kG~I~R~~gg 60 (77)
T 2jt1_A 25 VKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVNAG 60 (77)
T ss_dssp EEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEESCS
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEecCCC
Confidence 367889999999999987655444446899998643
No 372
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=22.80 E-value=9.2 Score=31.62 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=27.2
Q ss_pred ceEEEEEEeeEEEEEEecCCceEEeeecCCccEEEEC
Q 048197 368 HSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVP 404 (480)
Q Consensus 368 ~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~vVP 404 (480)
---.||+.|+. -++++-||... ..+++||.++|=
T Consensus 29 RfeTYvI~Ger-SG~I~lNGAAA--rl~~~GD~vII~ 62 (97)
T 1uhe_A 29 RFSTYVILGKK-RGEICVNGAAA--RKVAIGDVVIIL 62 (97)
T ss_dssp EEEEECEEECS-TTCEEEEGGGG--GGCCTTCEEEEE
T ss_pred eEEEEEEeecc-CCeEEEchHHH--ccCCCCCEEEEE
Confidence 34579999998 89999998743 257999999874
No 373
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=22.20 E-value=1.4e+02 Score=26.23 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=37.5
Q ss_pred eEEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEEE
Q 048197 82 AVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLVA 156 (480)
Q Consensus 82 s~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~~ 156 (480)
.+....+.||-.+...=..+..++||++|...+-. .| ..+..+.+||+|-
T Consensus 97 ~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~--~~-----------------------~~~~~l~~G~~fG 146 (212)
T 3ukn_A 97 IIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK--DN-----------------------TVLAILGKGDLIG 146 (212)
T ss_dssp HCEEEEECTTCEEECTTSBCCEEEEEEECCEEEES--SS-----------------------CEEEEECTTCEEE
T ss_pred HhheEEeCCCCEEEECCCcccEEEEEEecEEEEEE--CC-----------------------eEEEEecCCCCcC
Confidence 34566888998876666668999999999987752 22 1267899999884
No 374
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=22.10 E-value=4.1e+02 Score=23.45 Aligned_cols=111 Identities=13% Similarity=0.105 Sum_probs=67.9
Q ss_pred cCCceE-EEeCCCChhccccCeeEEEEEEcCCeeecCccc-CCCeEEEEEece-EEEEEEcCCCc-cchhhhhhcccccc
Q 048197 61 SEAGVT-EFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYT-NTPELFYVVQGR-GIHGAVFPGCP-ETYQESQQRSSESQ 136 (480)
Q Consensus 61 se~G~~-e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~el~yV~~G~-g~~g~v~pg~~-etf~~~~~~~~~~~ 136 (480)
.|||.+ |+|......-+.+ .+.+..-|.++...--|-. +++|+-|-..|. ..+-++.|++. +++
T Consensus 20 PEGG~yrEt~Rs~~~~~R~~-~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~----------- 87 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGERGH-STAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTF----------- 87 (154)
T ss_dssp TTSSEEEEEEECSSSTTTCS-CEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEE-----------
T ss_pred CCCccEEEEEeCCCCCCCcc-eeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEE-----------
Confidence 499998 4565432222333 4555566778876555555 799999999997 56667767542 111
Q ss_pred ccccccccee-EeecCCcE--EEeCCCCEEEEEcCCCCcEEEEEEeeCCCCCccccccceeeeecC
Q 048197 137 SRSQDQHQKV-RQIREGDL--VALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG 199 (480)
Q Consensus 137 ~~~~d~~qk~-~~l~~GDV--~~iPaG~~h~~~N~G~~~l~~v~~~d~~n~~nqld~~~~~F~LaG 199 (480)
++ .++..|++ ++||+|+-+-....| ...+|+. +..+.- .|..|=|+-
T Consensus 88 --------~LG~d~~~Ge~pQ~vVP~G~WqaA~~~g--~~~LVsC--tVaPGF----~f~dFel~~ 137 (154)
T 1znp_A 88 --------TLGPAILEGERPQVIVPANCWQSAESLG--DFTLVGC--TVSPGF----AFSSFVMAE 137 (154)
T ss_dssp --------EESSCTTTTEESEEEECTTCEEEEEESS--SEEEEEE--EESSCC----CGGGEEECC
T ss_pred --------EeCCCcccCcccEEEEcCCEEEEeeECC--CeEEEEE--EecCCC----cccccEecC
Confidence 11 26677775 899999876665554 4555554 334442 256677763
No 375
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=22.00 E-value=1e+02 Score=29.26 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=20.5
Q ss_pred ecCCccEEEECCCcEEEEEcCCCCeEEEE
Q 048197 394 QIREGQLIVVPQGFAVVKRASNRGLEWIS 422 (480)
Q Consensus 394 ~l~~GdV~vVPqg~~~~~~ag~e~l~~v~ 422 (480)
..++|+++++|.++.|....-..+-+|++
T Consensus 161 ~P~~G~~v~F~s~~lH~v~pV~~G~R~~~ 189 (243)
T 3dkq_A 161 KLSAGSLVLYPSSSLHQVTPVLSGERTAA 189 (243)
T ss_dssp CCCTTCEEEEETTSEEEECCEEEECEEEE
T ss_pred ecCCCEEEEECCCCeEcCccccccCEEEE
Confidence 57899999999999887543233444543
No 376
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=21.77 E-value=1.4e+02 Score=26.42 Aligned_cols=49 Identities=8% Similarity=0.093 Sum_probs=36.2
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+....+.+|......=..+..+++|.+|...+-....+ .+..+.+||+|
T Consensus 148 ~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~------------------------~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQG------------------------VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTE------------------------EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCc------------------------eEEEcCCCCcc
Confidence 34567788887766666789999999999887653211 26789999987
No 377
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=21.71 E-value=2.1e+02 Score=23.36 Aligned_cols=66 Identities=18% Similarity=0.283 Sum_probs=37.9
Q ss_pred ccccccccccccCCceEEE-EEEeeEEEEEEecCCceEEeeecCCccEEEECCCcEEEEEcCCCCeEEEEEE
Q 048197 354 YQNAMMAPHWNLNAHSVVY-ITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFK 424 (480)
Q Consensus 354 ~pgam~~PHwh~nA~ei~y-V~~G~grv~vv~~~G~~~f~~~l~~GdV~vVPqg~~~~~~ag~e~l~~v~f~ 424 (480)
+.+|++.|--.-.-..... |.=|.|+. +.+|+.+ .-.++.||.++++.||.-...-- ++-+|+.+.
T Consensus 21 T~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~-p~~VkvGD~Vlf~k~y~Gtevk~-dgeey~i~r 87 (97)
T 1pcq_O 21 SAGGIVLTGSAAAKSTRGEVLAVGNGRI---LENGEVK-PLDVKVGDIVIFNDGYGVKSEKI-DNEEVLIMS 87 (97)
T ss_dssp TTTSSCCCCCCSCCCCEEEEEEECSEEC---TTSSSCE-ECSCCTTCEEEECCCSSCEEEEE-TTEEEEEEE
T ss_pred ccceEEeCcccccCCcccEEEEEcCcee---cCCCCEE-ecccCCCCEEEECCccCCeEEEE-CCEEEEEEE
Confidence 4678888854222223333 33477753 5567653 33799999999999665333221 223455554
No 378
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=21.44 E-value=91 Score=27.22 Aligned_cols=50 Identities=10% Similarity=0.125 Sum_probs=32.9
Q ss_pred eEEeeeeccccccccccccCCceEEEEEEeeEEEEEEecCCceEEeeecCCccEE
Q 048197 347 SAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLI 401 (480)
Q Consensus 347 sa~~v~L~pgam~~PHwh~nA~ei~yV~~G~grv~vv~~~G~~~f~~~l~~GdV~ 401 (480)
.+....+.||-+.---= -.++.+.||++|.+++.. ++|+. -..+.+||+|
T Consensus 93 ~~~~~~~~~ge~I~~~G-~~~~~ly~I~~G~v~~~~--~~g~~--~~~l~~G~~f 142 (198)
T 2ptm_A 93 LLEFEVFQPADYVIQEG-TFGDRMFFIQQGIVDIIM--SDGVI--ATSLSDGSYF 142 (198)
T ss_dssp HCEEEEECTTCEEECTT-SCCSEEEEEEECCEEEEC--TTSCE--EEEECTTCEE
T ss_pred hccceeeCCCCEEEECC-CcCcEEEEEEeCEEEEEe--cCCeE--EEEecCCCEe
Confidence 34455556665543222 246689999999988765 66763 2478999987
No 379
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=21.23 E-value=1.7e+02 Score=29.41 Aligned_cols=52 Identities=8% Similarity=0.008 Sum_probs=0.0
Q ss_pred EEEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 83 VFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 83 ~~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
+....+.+|-++.-.=.....+++|++|...+-. .+.+.+.. +..+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~-~~~G~~~~--------------------v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVGRC--------------------VGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEECEEEEEE-ECSSCEEE--------------------EEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEE-ecCCCEEE--------------------EEEecCCCEE
No 380
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=20.33 E-value=1.6e+02 Score=26.12 Aligned_cols=47 Identities=11% Similarity=0.077 Sum_probs=34.9
Q ss_pred EEEEEcCCeeecCcccCCCeEEEEEeceEEEEEEcCCCccchhhhhhcccccccccccccceeEeecCCcEE
Q 048197 84 FRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYQESQQRSSESQSRSQDQHQKVRQIREGDLV 155 (480)
Q Consensus 84 ~r~~i~p~gl~lPh~~~a~el~yV~~G~g~~g~v~pg~~etf~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~ 155 (480)
...++.+|..+.-.=..++.+++|++|...+-. .| +.+..+.+||+|
T Consensus 31 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~--~~-----------------------~~~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV--ND-----------------------NKVNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCCCCEEEEEEECCEEEES--TT-----------------------SCCEEECTTCEE
T ss_pred ceEEECCCCEEEecCCCCCEEEEEEeeEEEEEE--CC-----------------------EEEEecCCCCee
Confidence 456777887766655678999999999998753 22 125789999988
No 381
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=20.27 E-value=1.7e+02 Score=28.64 Aligned_cols=61 Identities=13% Similarity=0.024 Sum_probs=31.2
Q ss_pred ceeEEeeeeccccc---cccccccCCceEEEEEEe--e-EEEEEEecCCceEEeeecCCccEEEECCC
Q 048197 345 QLSAEKGNLYQNAM---MAPHWNLNAHSVVYITRG--N-GRMQIVAENGENVFDGQIREGQLIVVPQG 406 (480)
Q Consensus 345 ~lsa~~v~L~pgam---~~PHwh~nA~ei~yV~~G--~-grv~vv~~~G~~~f~~~l~~GdV~vVPqg 406 (480)
.+-+..-.|+|||. +.||-|=+..|..|.-+= . ..+++..+-.. ...-.|+-||++++|.+
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdE-trh~~V~n~daVlvP~w 245 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDE-TKHLVMSNEQAAISPSW 245 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESSTTS-CEEEEECTTEEEEECTT
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCCCc-eEEEEEECCCEEEeCCC
Confidence 35566667888875 689999877777776541 1 12333322111 21125799999999996
Done!