Your job contains 1 sequence.
>048199
MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ
IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS
KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ
KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN
SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK
KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR
LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV
EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE
PSMLVSGSDDCKVLY
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048199
(495 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 2001 6.7e-207 1
DICTYBASE|DDB_G0288453 - symbol:DDB_G0288453 "E3 ubiquiti... 480 3.0e-83 3
UNIPROTKB|H0Y339 - symbol:RFWD2 "E3 ubiquitin-protein lig... 435 3.8e-60 2
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 450 2.0e-44 2
TAIR|locus:2039139 - symbol:SPA1 "SUPPRESSOR OF PHYA-105 ... 416 6.8e-42 2
RGD|1304773 - symbol:Rfwd2 "ring finger and WD repeat dom... 437 3.6e-41 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 439 8.1e-41 1
UNIPROTKB|E2RRJ5 - symbol:RFWD2 "Uncharacterized protein"... 437 1.5e-40 1
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 437 1.5e-40 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 437 1.5e-40 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 435 2.5e-40 1
TAIR|locus:2037005 - symbol:SPA4 "SPA1-related 4" species... 431 9.8e-40 1
TAIR|locus:2136133 - symbol:SPA2 "SPA1-related 2" species... 420 3.2e-38 1
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 302 2.1e-25 1
UNIPROTKB|E9PJB5 - symbol:RFWD2 "E3 ubiquitin-protein lig... 210 2.3e-16 1
TAIR|locus:2145111 - symbol:RUP1 "AT5G52250" species:3702... 198 5.5e-13 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 175 1.5e-12 1
TAIR|locus:2172883 - symbol:RUP2 "AT5G23730" species:3702... 177 1.2e-10 1
UNIPROTKB|E9PMW8 - symbol:RFWD2 "E3 ubiquitin-protein lig... 140 9.1e-09 1
ZFIN|ZDB-GENE-060810-140 - symbol:trim105 "tripartite mot... 158 2.2e-08 1
UNIPROTKB|E1B7M2 - symbol:TRIM31 "Uncharacterized protein... 156 2.2e-08 1
UNIPROTKB|G3MWR7 - symbol:TRIM31 "Uncharacterized protein... 156 5.0e-08 1
UNIPROTKB|I7GGX8 - symbol:TRIM31 "Tripartite motif protei... 142 8.9e-08 2
UNIPROTKB|E2RFB0 - symbol:TRIM50 "Uncharacterized protein... 150 2.1e-07 1
SGD|S000000662 - symbol:RAD18 "E3 ubiquitin ligase" speci... 150 2.1e-07 1
UNIPROTKB|K7GRY7 - symbol:TRIM31 "Uncharacterized protein... 142 2.2e-07 2
UNIPROTKB|B6ICU7 - symbol:TRIM31 "Tripartite motif-contai... 142 2.7e-07 2
UNIPROTKB|F1RYH5 - symbol:TRIM31 "Uncharacterized protein... 142 2.7e-07 2
WB|WBGene00011365 - symbol:T02C1.1 species:6239 "Caenorha... 124 4.9e-07 1
UNIPROTKB|I3L0H3 - symbol:TRIM73 "Tripartite motif-contai... 138 9.2e-07 1
UNIPROTKB|Q86UV7 - symbol:TRIM73 "Tripartite motif-contai... 138 9.3e-07 1
UNIPROTKB|E1C7S4 - symbol:TRIM50 "Uncharacterized protein... 143 1.3e-06 1
UNIPROTKB|E9PFM0 - symbol:TRIM6 "Tripartite motif-contain... 131 1.4e-06 2
UNIPROTKB|J3KQW6 - symbol:TRIM73 "Tripartite motif-contai... 138 1.4e-06 1
UNIPROTKB|Q86UV6 - symbol:TRIM74 "Tripartite motif-contai... 136 1.6e-06 1
MGI|MGI:2684881 - symbol:Trim40 "tripartite motif-contain... 135 2.0e-06 1
UNIPROTKB|B0V1M0 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 2.1e-06 1
DICTYBASE|DDB_G0270568 - symbol:DDB_G0270568 "C3HC4-type ... 140 2.1e-06 1
UNIPROTKB|Q28DL4 - symbol:traf6 "TNF receptor-associated ... 141 2.6e-06 1
UNIPROTKB|F1N2E6 - symbol:TRIM34 "Uncharacterized protein... 144 2.6e-06 2
UNIPROTKB|Q3ZCC3 - symbol:TRAF6 "TNF receptor-associated ... 135 2.7e-06 2
UNIPROTKB|Q865W2 - symbol:TRIM50 "E3 ubiquitin-protein li... 140 2.7e-06 1
UNIPROTKB|E1C626 - symbol:TRAF6 "Uncharacterized protein"... 132 3.6e-06 2
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 131 3.8e-06 1
UNIPROTKB|F1RWB5 - symbol:F1RWB5 "Uncharacterized protein... 136 3.9e-06 1
UNIPROTKB|Q6DJN2 - symbol:traf6-b "TNF receptor-associate... 138 4.3e-06 2
MGI|MGI:108072 - symbol:Traf6 "TNF receptor-associated fa... 138 5.1e-06 1
UNIPROTKB|A7XUJ6 - symbol:TRAF6 "TNF receptor-associated ... 138 5.3e-06 1
UNIPROTKB|E1BNQ6 - symbol:TRIM50 "Uncharacterized protein... 137 5.8e-06 1
MGI|MGI:2385051 - symbol:Trim31 "tripartite motif-contain... 137 6.2e-06 1
UNIPROTKB|A6NI17 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 8.2e-06 2
UNIPROTKB|C9JJD5 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 8.2e-06 2
UNIPROTKB|E7ETS6 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 8.2e-06 2
UNIPROTKB|F8W1J7 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 8.2e-06 2
UNIPROTKB|G8JLN1 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 8.2e-06 2
UNIPROTKB|Q9BZY9 - symbol:TRIM31 "E3 ubiquitin-protein li... 135 8.2e-06 2
UNIPROTKB|D6RAH9 - symbol:LNX1 "E3 ubiquitin-protein liga... 112 9.6e-06 1
UNIPROTKB|D6RB76 - symbol:LNX1 "E3 ubiquitin-protein liga... 112 9.6e-06 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 112 9.6e-06 1
UNIPROTKB|J3QKM8 - symbol:RNF138 "E3 ubiquitin-protein li... 112 9.6e-06 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 112 9.6e-06 1
UNIPROTKB|Q9C030 - symbol:TRIM6 "Tripartite motif-contain... 104 1.0e-05 3
UNIPROTKB|Q9Y4K3 - symbol:TRAF6 "TNF receptor-associated ... 135 1.1e-05 1
UNIPROTKB|B6CJY4 - symbol:TRAF6 "TNF receptor-associated ... 135 1.1e-05 1
UNIPROTKB|B6CJY5 - symbol:TRAF6 "TNF receptor-associated ... 135 1.1e-05 1
UNIPROTKB|F1RWB2 - symbol:TRIM61 "Uncharacterized protein... 134 1.1e-05 1
UNIPROTKB|E2RDE8 - symbol:TRAF6 "Uncharacterized protein"... 135 1.2e-05 1
UNIPROTKB|G3MWZ9 - symbol:TRIM34 "Uncharacterized protein... 144 1.2e-05 2
UNIPROTKB|Q8N448 - symbol:LNX2 "Ligand of Numb protein X ... 136 1.2e-05 1
UNIPROTKB|C9J060 - symbol:TRIM22 "E3 ubiquitin-protein li... 125 1.3e-05 1
POMBASE|SPCC548.05c - symbol:SPCC548.05c "ubiquitin-prote... 134 1.4e-05 2
UNIPROTKB|Q3MV19 - symbol:traf6-a "TNF receptor-associate... 134 1.5e-05 2
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 110 1.6e-05 1
UNIPROTKB|C9JIU5 - symbol:TRIM22 "E3 ubiquitin-protein li... 126 1.7e-05 1
ZFIN|ZDB-GENE-081030-6 - symbol:trim35-38 "tripartite mot... 132 1.8e-05 1
RGD|1306853 - symbol:Traf6 "TNF receptor-associated facto... 133 1.8e-05 1
RGD|1308607 - symbol:Trim31 "tripartite motif-containing ... 133 1.9e-05 2
ZFIN|ZDB-GENE-040426-745 - symbol:rad18 "RAD18 homolog (S... 131 2.1e-05 1
UNIPROTKB|E7EUM2 - symbol:BRCA1 "Breast cancer type 1 sus... 131 2.2e-05 2
UNIPROTKB|Q3B891 - symbol:BRCA1 "Breast cancer type 1 sus... 131 2.5e-05 1
ZFIN|ZDB-GENE-040426-1000 - symbol:trim47 "tripartite mot... 130 2.6e-05 2
UNIPROTKB|Q86XT4 - symbol:TRIM50 "E3 ubiquitin-protein li... 131 2.6e-05 1
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 128 2.9e-05 1
RGD|1359645 - symbol:Trim40 "tripartite motif-containing ... 125 2.9e-05 1
UNIPROTKB|Q6MFY8 - symbol:Trim40 "Tripartite motif-contai... 125 2.9e-05 1
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 127 3.1e-05 1
UNIPROTKB|C9J0Q4 - symbol:RAD18 "E3 ubiquitin-protein lig... 107 3.3e-05 1
MGI|MGI:104537 - symbol:Brca1 "breast cancer 1" species:1... 127 3.3e-05 2
UNIPROTKB|E7EQQ5 - symbol:TRIM5 "Tripartite motif-contain... 122 3.4e-05 1
UNIPROTKB|F1ND52 - symbol:RNF4 "Uncharacterized protein" ... 120 3.6e-05 1
UNIPROTKB|E7ETR2 - symbol:BRCA1 "Breast cancer 1, early o... 131 3.6e-05 2
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 127 3.8e-05 1
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 127 3.8e-05 1
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 127 3.8e-05 1
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 127 3.8e-05 1
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 127 3.8e-05 1
UNIPROTKB|E7EWN5 - symbol:BRCA1 "Breast cancer type 1 sus... 131 4.0e-05 1
ZFIN|ZDB-GENE-030131-4325 - symbol:trim8b "tripartite mot... 118 4.1e-05 2
UNIPROTKB|E7EN90 - symbol:BRCA1 "Breast cancer type 1 sus... 106 4.3e-05 1
UNIPROTKB|G3XAC3 - symbol:BRCA1 "Breast cancer 1, early o... 131 4.3e-05 1
WARNING: Descriptions of 125 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 2001 (709.4 bits), Expect = 6.7e-207, P = 6.7e-207
Identities = 378/493 (76%), Positives = 431/493 (87%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSXXXXXXXXXXXXXXXXXXXXXXVGVSELDKDMLCPICMQ 60
M+E+ST+PVVPAVKPD + SS +G +LDKD+LCPICMQ
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSE---IGAPDLDKDLLCPICMQ 57
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR +S
Sbjct: 58 IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVS 117
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASPL+ FR+ALQ+GC VS+KE+D+L++LL+E+KRKMEQEEAERNMQILLDFLHCLRKQ
Sbjct: 118 KTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQ 177
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W +KN
Sbjct: 178 KVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKN 235
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
G ++SL+ RGG+ G+ QNKK +GKAQ +SHG +KD+L+GSDSQ LNQS +S+ RK
Sbjct: 236 QIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARK 295
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
KR+HAQFNDLQECYLQKRRQ+A+QP++KQE+DK+++ REGY+ GLADFQSVLTTFTRYSR
Sbjct: 296 KRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSR 355
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
LRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD+ CP+V
Sbjct: 356 LRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIV 415
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS+MEYEEHEKRAWSVDFSRTE
Sbjct: 416 EMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTE 475
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 476 PSMLVSGSDDCKV 488
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 480 (174.0 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
Identities = 89/171 (52%), Positives = 125/171 (73%)
Query: 323 NQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSI 382
N ++ + N I GL F L FT+Y+ +V+A L++GD+F++++IVSSI
Sbjct: 614 NNTNSNLNNLNNNIESLKVGKGLLSFSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVSSI 673
Query: 383 EFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIA 442
EFDRD++ FATAGV+++IK+F+F S + + +VH PV EM RSK+SCLSWN + K++IA
Sbjct: 674 EFDRDEEYFATAGVTKKIKIFEF-SQIRDNVEVHSPVKEMTCRSKISCLSWNTYIKSQIA 732
Query: 443 SSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
SSDYEGI+++WD T Q++M EEHEKR WSVDFSRT+P+ L SGSDD +V
Sbjct: 733 SSDYEGIISLWDANTGQNIMTLEEHEKRVWSVDFSRTDPTQLASGSDDTRV 783
Score = 358 (131.1 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
Identities = 77/255 (30%), Positives = 137/255 (53%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
E+D+ +LCP+C +IKE F++ CGHSFCY CII HL CP C YLT Q++PNF L
Sbjct: 149 EVDELLLCPVCNDMIKEPFISKCGHSFCYQCIIIHLSKSKTCPICMVYLTREQIFPNFAL 208
Query: 108 DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
+K ++K + ++ FR L +S+ +I+ ++S L EKK+ +E + +
Sbjct: 209 NKFVEKIGVKSSLLPTPTVKQFRNTLSNE-NLSLHDINLMVSTLLEKKKNLEVHDQQVEY 267
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARD-------RYSVKL 220
ILLDFL R QK++ K+++ + Y++ DI A+E H+ D+ + R ++ +
Sbjct: 268 DILLDFLQKTRSQKMETFKQLKRQISYLENDIKAIE-HQKDISESLSNGDLDMLRDALFI 326
Query: 221 RMLGDDSNTRKS--WLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
GDDSN S S+ + N++ I ++ N ++ + N + N++ +
Sbjct: 327 GKGGDDSNIVLSIPHHSNNNNNNNNINPNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 386
Query: 279 KDSLTGSDSQCLNQS 293
+++ +++ N +
Sbjct: 387 NNNINNNNNSSNNNN 401
Score = 56 (24.8 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 281 SLTGSDSQCLNQSGLSVVRKKR-VHAQFNDLQECYLQKRRQMA-NQPHTKQESDKN 334
S++ + + N + S++ KKR V +DLQ CY + + P E++ N
Sbjct: 530 SISTTTTTTTNNNNNSLISKKRRVEIHLDDLQSCYFSAYNESDYDSPTIISETNHN 585
Score = 54 (24.1 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 13/65 (20%), Positives = 31/65 (47%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ +++ ++AS + V +W TT++++ E + V F+ +++ GS D
Sbjct: 764 VDFSRTDPTQLASGSDDTRVKLWSTTTERAITTIES-KANICCVKFNPCSSNLIAFGSAD 822
Query: 491 CKVLY 495
+ Y
Sbjct: 823 HHIHY 827
Score = 45 (20.9 bits), Expect = 3.2e-37, Sum P(3) = 3.2e-37
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 431 LSWNKF-SKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
+S+ KF +K+ I S+ + + +W+V V + H
Sbjct: 847 VSYVKFMNKDEIISASTDSTLKLWNVNQNDCVRTFTGH 884
Score = 42 (19.8 bits), Expect = 3.7e-50, Sum P(3) = 3.7e-50
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 46 VSELDKDMLCPICM 59
+ L K CPICM
Sbjct: 181 IIHLSKSKTCPICM 194
Score = 39 (18.8 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 13/72 (18%), Positives = 30/72 (41%)
Query: 203 ERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITS--SLNARGGSSAGSL 260
++ R++++ D S + + +S + N++ I+ S S+N+ S S
Sbjct: 549 KKRRVEIH-LDDLQSCYFSAYNESDYDSPTIISETNHNNNNILKSPNSVNSSSSSIINSN 607
Query: 261 QNKKGDGKAQAN 272
N + +N
Sbjct: 608 SNSNNNNNTNSN 619
Score = 37 (18.1 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 13/68 (19%), Positives = 31/68 (45%)
Query: 225 DDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQAN-SHGHQRKDSLT 283
+++N + SS + NS+ +S+ N+ ++ S N + + N S+ + + +
Sbjct: 386 NNNNINNNNNSSNNNNSNNNSSSNNNSNNNNNNNSNNNNIPNNSSNVNNSNNNPNNNKIL 445
Query: 284 GSDSQCLN 291
S +N
Sbjct: 446 ESSLNGIN 453
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 435 (158.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 87/197 (44%), Positives = 127/197 (64%)
Query: 299 RKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 191 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 236
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 237 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIH 296
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 297 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 356
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 357 NLMDPKLLASGSDDAKV 373
Score = 199 (75.1 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 47/134 (35%), Positives = 73/134 (54%)
Query: 65 AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------ 117
A++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R
Sbjct: 1 AYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRF 60
Query: 118 QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKMEQEEAERNMQILL 171
++ + S R Q Q G +D +LM LL +KK+++E E +QIL+
Sbjct: 61 KLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILM 120
Query: 172 DFLHCLRKQKVDEL 185
+FL R+ K +E+
Sbjct: 121 EFLKVARRNKREEM 134
Score = 42 (19.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS + L G +D
Sbjct: 354 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFGCAD 412
Query: 490 DCKVLY 495
C Y
Sbjct: 413 HCVHYY 418
Score = 38 (18.4 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLN 250
KL G D K W +++D NS I + N
Sbjct: 362 KLLASGSDDAKVKLWSTNLD-NSVASIEAKAN 392
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 450 (163.5 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 93/214 (43%), Positives = 134/214 (62%)
Query: 284 GSDSQCLNQSGLSVV---RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREG 340
G +SQ Q+ + R+KR+ A F DL++CY R ++ D +++
Sbjct: 301 GGNSQSKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNRM-------SRITDDSRTVNQ-- 351
Query: 341 YNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRR 399
L DF L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++
Sbjct: 352 ----LDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKK 407
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
IKVF++ +V+ + D+H PV EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 408 IKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQ 467
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 468 RSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 501
Score = 289 (106.8 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 87/287 (30%), Positives = 138/287 (48%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA +T CGHSFCY CI L + + CP C + + N +QLYPNFL+++L
Sbjct: 95 DFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNEL 154
Query: 111 LKKTSARQISKTAS---PLENFRQALQQGCGVSVKEIDS-----LMSLLSEKKRKMEQEE 162
+ K R K P Q Q G + +D ++ L +KK+++E E
Sbjct: 155 ILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAES 214
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL++FL R+ K ++L+++Q +L++++EDI VE YS M
Sbjct: 215 QAAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEE-------MSGMYSPISDM 267
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +T + SS II S + G+ Q+K+ + NS R+ L
Sbjct: 268 DCNSDSTVPQVEAPSPAPSSSIIDPSEYIQP-PFGGNSQSKR---QTWYNSTLASRRKRL 323
Query: 283 TG--SD-SQCLNQSGLS-VVRKKRVHAQFNDLQECYLQKRRQMANQP 325
T D QC + +S + R Q +D EC + R + +P
Sbjct: 324 TAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKFTRYNSVRP 370
Score = 46 (21.3 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 17/66 (25%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS T L G +D
Sbjct: 482 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPTSRYHLAFGCAD 540
Query: 490 DCKVLY 495
C Y
Sbjct: 541 HCVHYY 546
Score = 42 (19.8 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 236 SIDKNSSGIITSSLNARGGSSAGSLQNKKG-DGKAQANSHGHQRKDSLTGSDSQCLNQSG 294
S+ SSG + S L++ GG+ + N +G + N + S+ +D Q
Sbjct: 18 SVPGTSSGSLCS-LSSSGGTGGANSGNSAAQNGSSSGNGVSSRTLGSV--ADGQSARLGS 74
Query: 295 LSVVRKKRVH 304
LS RK+ ++
Sbjct: 75 LS--RKRPLY 82
>TAIR|locus:2039139 [details] [associations]
symbol:SPA1 "SUPPRESSOR OF PHYA-105 1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048575 "short-day photoperiodism, flowering"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:2000028 "regulation of
photoperiodism, flowering" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0010114
"response to red light" evidence=IEP] [GO:0010218 "response to far
red light" evidence=IEP] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] [GO:0009585 "red, far-red
light phototransduction" evidence=IGI] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS00107
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009640 GO:GO:0010218
GO:GO:0010114 GO:GO:0009658 GO:GO:0004672 GO:GO:0009585
EMBL:AC006526 HSSP:P16649 GO:GO:0080008 GO:GO:0010100 GO:GO:0048575
EMBL:AF135455 EMBL:AK227186 EMBL:AK221994 IPI:IPI00541649
PIR:F84901 PIR:G84901 RefSeq:NP_182157.2 UniGene:At.11156
ProteinModelPortal:Q9SYX2 SMR:Q9SYX2 IntAct:Q9SYX2 MINT:MINT-276478
STRING:Q9SYX2 PaxDb:Q9SYX2 PRIDE:Q9SYX2 EnsemblPlants:AT2G46340.1
GeneID:819242 KEGG:ath:AT2G46340 GeneFarm:2885 TAIR:At2g46340
HOGENOM:HOG000029775 InParanoid:Q9SYX2 KO:K16240 OMA:LKSELIC
PhylomeDB:Q9SYX2 ProtClustDB:CLSN2918282 Genevestigator:Q9SYX2
GO:GO:2000028 Uniprot:Q9SYX2
Length = 1029
Score = 416 (151.5 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 72/142 (50%), Positives = 101/142 (71%)
Query: 352 LTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNE 411
L F RYS+ +R GD+ +SA++V S+ FD D++ A AG+S++IK+FDF + +NE
Sbjct: 692 LCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNE 751
Query: 412 PADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRA 471
VH P+VEM +SKLSC+ WN + KN +AS+DY+G+V +WD T Q +Y EH+KRA
Sbjct: 752 SVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRA 811
Query: 472 WSVDFSRTEPSMLVSGSDDCKV 493
WSVDFS ++P+ VSGSDDC V
Sbjct: 812 WSVDFSPSDPTKFVSGSDDCSV 833
Score = 66 (28.3 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 145 DSLMS-LLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
D L S L+ E AE ++LL FL L QK + ++ D+ +++DI E
Sbjct: 522 DILKSELICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAE 581
Query: 204 R 204
R
Sbjct: 582 R 582
Score = 42 (19.8 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 255 SSAGSLQNKKGDGKAQANSHGHQRKDSLTG 284
SS+G +KK NS G+Q + + TG
Sbjct: 359 SSSGGRDSKKRKMDLHLNSPGNQLQATSTG 388
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 87/197 (44%), Positives = 127/197 (64%)
Query: 299 RKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 58 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 103
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 104 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 163
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 164 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 223
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 224 NLMDPKLLASGSDDAKV 240
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 439 (159.6 bits), Expect = 8.1e-41, P = 8.1e-41
Identities = 88/196 (44%), Positives = 125/196 (63%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
R+KR+ A F DL++CY R T+ D + L +FQ L+ FTRY
Sbjct: 342 RRKRLTAHFEDLEQCYFSTRM-------TRVSDDSRTTSQ------LDEFQECLSKFTRY 388
Query: 359 SRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHC 417
+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 389 NSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHY 448
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+
Sbjct: 449 PENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN 508
Query: 478 RTEPSMLVSGSDDCKV 493
+P +L SGSDD KV
Sbjct: 509 LMDPKLLASGSDDAKV 524
Score = 302 (111.4 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 92/291 (31%), Positives = 145/291 (49%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 119 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 178
Query: 111 LKKTSARQISK------TASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKM 158
+ K R K + S R Q +Q G +D +LM LL +KK+++
Sbjct: 179 ILKQKQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQL 238
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 239 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 291
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK + NS R
Sbjct: 292 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQAKK---QPWYNSTLASR 342
Query: 279 KDSLTG--SD-SQCLNQSGLSVVRK-KRVHAQFNDLQECYLQKRRQMANQP 325
+ LT D QC + ++ V R +Q ++ QEC + R + +P
Sbjct: 343 RKRLTAHFEDLEQCYFSTRMTRVSDDSRTTSQLDEFQECLSKFTRYNSVRP 393
Score = 42 (19.8 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS + L G +D
Sbjct: 505 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFGCAD 563
Query: 490 DCKVLY 495
C Y
Sbjct: 564 HCVHYY 569
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 87/197 (44%), Positives = 127/197 (64%)
Query: 299 RKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 358 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 403
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 404 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 463
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 464 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 523
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 524 NLMDPKLLASGSDDAKV 540
Score = 308 (113.5 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 92/291 (31%), Positives = 146/291 (50%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKM 158
+ K R ++ + S R Q LQ G +D +LM LL +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 307
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK + NS R
Sbjct: 308 ----VSEDSTVPQ--FEAPSPSHSNIIDSTEYSQPPGFSGSSQTKK---QPWYNSTLASR 358
Query: 279 KDSLTG--SD-SQCLNQSGLSVVRK-KRVHAQFNDLQECYLQKRRQMANQP 325
+ LT D QC + +S + R +Q ++ QEC + R + +P
Sbjct: 359 RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRP 409
Score = 42 (19.8 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS + L G +D
Sbjct: 521 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFGCAD 579
Query: 490 DCKVLY 495
C Y
Sbjct: 580 HCVHYY 585
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 87/197 (44%), Positives = 127/197 (64%)
Query: 299 RKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 358 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 403
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 404 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 463
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 464 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 523
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 524 NLMDPKLLASGSDDAKV 540
Score = 301 (111.0 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 90/291 (30%), Positives = 145/291 (49%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKM 158
+ K R ++ + S R Q Q G +D +LM LL +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 307
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +G+ Q KK + NS R
Sbjct: 308 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGTSQTKK---QPWYNSTLASR 358
Query: 279 KDSLTG--SD-SQCLNQSGLSVVRK-KRVHAQFNDLQECYLQKRRQMANQP 325
+ LT D QC + +S + R +Q ++ QEC + R + +P
Sbjct: 359 RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRP 409
Score = 42 (19.8 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS + L G +D
Sbjct: 521 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFGCAD 579
Query: 490 DCKVLY 495
C Y
Sbjct: 580 HCVHYY 585
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 87/197 (44%), Positives = 127/197 (64%)
Query: 299 RKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 360 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 405
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 406 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 465
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 466 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 525
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 526 NLMDPKLLASGSDDAKV 542
Score = 304 (112.1 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 91/291 (31%), Positives = 145/291 (49%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 137 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 196
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKM 158
+ K R ++ + S R Q Q G +D +LM LL +KK+++
Sbjct: 197 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 256
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 257 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 309
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK + NS R
Sbjct: 310 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK---QPWYNSTLASR 360
Query: 279 KDSLTG--SD-SQCLNQSGLSVVRK-KRVHAQFNDLQECYLQKRRQMANQP 325
+ LT D QC + +S + R +Q ++ QEC + R + +P
Sbjct: 361 RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRP 411
Score = 42 (19.8 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS + L G +D
Sbjct: 523 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFGCAD 581
Query: 490 DCKVLY 495
C Y
Sbjct: 582 HCVHYY 587
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 435 (158.2 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 87/197 (44%), Positives = 127/197 (64%)
Query: 299 RKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 356 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 401
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 402 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIH 461
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 462 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 521
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 522 NLMDPKLLASGSDDAKV 538
Score = 306 (112.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 91/291 (31%), Positives = 145/291 (49%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKM 158
+ K R ++ + S R Q Q G +D +LM LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK + NS R
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK---QPWYNSTLASR 356
Query: 279 KDSLTG--SD-SQCLNQSGLSVVRK-KRVHAQFNDLQECYLQKRRQMANQP 325
+ LT D QC + +S + R +Q ++ QEC + R + +P
Sbjct: 357 RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRP 407
Score = 42 (19.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG-SD 489
+ +N +AS + V +W SV E + V FS + L G +D
Sbjct: 519 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFGCAD 577
Query: 490 DCKVLY 495
C Y
Sbjct: 578 HCVHYY 583
>TAIR|locus:2037005 [details] [associations]
symbol:SPA4 "SPA1-related 4" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006281
"DNA repair" evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS50011
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
EMBL:AC022520 GO:GO:0080008 HOGENOM:HOG000029775 EMBL:AY040023
EMBL:AY133883 IPI:IPI00544468 PIR:E96571 RefSeq:NP_175717.1
RefSeq:NP_849802.1 UniGene:At.21898 ProteinModelPortal:Q94BM7
SMR:Q94BM7 IntAct:Q94BM7 STRING:Q94BM7 PaxDb:Q94BM7 PRIDE:Q94BM7
EnsemblPlants:AT1G53090.1 EnsemblPlants:AT1G53090.2 GeneID:841743
KEGG:ath:AT1G53090 GeneFarm:2950 TAIR:At1g53090 InParanoid:Q94BM7
OMA:WSINQGV PhylomeDB:Q94BM7 ProtClustDB:PLN00181
Genevestigator:Q94BM7 Uniprot:Q94BM7
Length = 794
Score = 431 (156.8 bits), Expect = 9.8e-40, P = 9.8e-40
Identities = 107/348 (30%), Positives = 185/348 (53%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
L E++ ME + ++LL+FL ++++K + ++Q + + DI+ V + ++
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQL--- 331
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQ 270
L+ G D +S+L+S + G T++ ++ ++K D
Sbjct: 332 --------VLQQKGRDV---RSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLES 380
Query: 271 ANSHGHQRKDSLTGSDSQCL----NQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPH 326
+ +L +S Q + +K + ++ L + +QP
Sbjct: 381 TLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPS 440
Query: 327 TKQESDKNIIHREGYNAGLAD-FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFD 385
+D R+G G D F L + +S+LRV A+L+ GD+ +S+N+V +I FD
Sbjct: 441 KDPINDS----RQG---GWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFD 493
Query: 386 RDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSD 445
RD + FATAGV+++IK+F+ S++ + D+H PVVE+ +RSKLS + WN + K+++ASS+
Sbjct: 494 RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSN 553
Query: 446 YEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+EG+V VWDV Q V E +EHEKR WS+D+S +P++L SGSDD V
Sbjct: 554 FEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSV 601
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 420 (152.9 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 89/218 (40%), Positives = 127/218 (58%)
Query: 291 NQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTK----------QESDKNIIHREG 340
+ S S V + R+ N L+ Y R A+ P + + SD + E
Sbjct: 624 SSSPASSVPEMRLIRNINQLESAYFAARID-AHLPEARYRLRPDRDLLRNSDNTVAEVEN 682
Query: 341 YNAGLAD-----FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAG 395
+D F L + RYS+ LR ++ +++N++ S+ FDRD+ FATAG
Sbjct: 683 SETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAG 742
Query: 396 VSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
VS++IK+++F S+ NE D+H P +EMP RSKLS + WN + +N +ASSDY+GIV +WDV
Sbjct: 743 VSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDV 802
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
TT Q++ + EHEKRAWSVDFS P+ L SGSDDC V
Sbjct: 803 TTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSV 840
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 302 (111.4 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 91/291 (31%), Positives = 144/291 (49%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 132 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 191
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKM 158
+ K R ++ + S R Q Q G +D +LM LL +KK+++
Sbjct: 192 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 251
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 252 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 304
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ + +GS Q KK + NS R
Sbjct: 305 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYIQPPGFSGSSQTKK---QPWYNSTLASR 355
Query: 279 KDSLTG--SD-SQCLNQSGLSVVRK-KRVHAQFNDLQECYLQKRRQMANQP 325
+ LT D QC + +S + R +Q ++ QEC + R + +P
Sbjct: 356 RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRP 406
>UNIPROTKB|E9PJB5 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
IPI:IPI00980524 ProteinModelPortal:E9PJB5 SMR:E9PJB5
Ensembl:ENST00000498306 ArrayExpress:E9PJB5 Bgee:E9PJB5
Uniprot:E9PJB5
Length = 189
Score = 210 (79.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/138 (35%), Positives = 77/138 (55%)
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR-- 117
+I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE 60
Query: 118 ----QISKTASPLENFR-QALQQGCGVSVKEID----SLM-SLLSEKKRKMEQEEAERNM 167
++ + S R Q Q G +D +LM LL +KK+++E E +
Sbjct: 61 EKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 168 QILLDFLHCLRKQKVDEL 185
QIL++FL R+ K +E+
Sbjct: 121 QILMEFLKVARRNKREEM 138
>TAIR|locus:2145111 [details] [associations]
symbol:RUP1 "AT5G52250" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0010224 "response to
UV-B" evidence=IEP;IGI;RCA] [GO:0010114 "response to red light"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009813 "flavonoid biosynthetic process" evidence=RCA]
[GO:0043496 "regulation of protein homodimerization activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0010218 GO:GO:0010114 GO:GO:0010224
HSSP:P16649 KO:K10143 GO:GO:0080008 EMBL:AB025603 EMBL:BT003150
EMBL:AK228112 EMBL:AY087205 IPI:IPI00517585 RefSeq:NP_200038.1
UniGene:At.29626 ProteinModelPortal:Q9LTJ6 SMR:Q9LTJ6 STRING:Q9LTJ6
EnsemblPlants:AT5G52250.1 GeneID:835301 KEGG:ath:AT5G52250
TAIR:At5g52250 InParanoid:Q9LTJ6 OMA:VVTEYDV PhylomeDB:Q9LTJ6
ProtClustDB:CLSN2687591 Genevestigator:Q9LTJ6 Uniprot:Q9LTJ6
Length = 385
Score = 198 (74.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 47/120 (39%), Positives = 72/120 (60%)
Query: 376 ANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVE--MPTRSKLSCLSW 433
++ + +IEFD ++ AT G++R+I+ + +S++ E D H E + T +KLS L W
Sbjct: 71 SDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASESYICTPAKLSSLKW 129
Query: 434 NK-FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHE-KRAWSVDFSRTEPSML-VSGSDD 490
FS I S DY+G+VT +DV Q V E +EH +R WSVD++ S++ SGSDD
Sbjct: 130 RPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDD 189
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFL 106
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL
Sbjct: 38 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFL 93
>TAIR|locus:2172883 [details] [associations]
symbol:RUP2 "AT5G23730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0010224 "response to UV-B"
evidence=IGI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0043496 "regulation of protein homodimerization activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AB005244 GO:GO:0009658 GO:GO:0010224
HSSP:P16649 KO:K10143 GO:GO:0080008 ProtClustDB:CLSN2687591
EMBL:AY039941 EMBL:BT015119 IPI:IPI00518125 RefSeq:NP_568435.2
UniGene:At.8740 ProteinModelPortal:Q9FFA7 SMR:Q9FFA7 PRIDE:Q9FFA7
EnsemblPlants:AT5G23730.1 GeneID:832438 KEGG:ath:AT5G23730
TAIR:At5g23730 HOGENOM:HOG000238730 InParanoid:Q9FFA7 OMA:QATACEY
PhylomeDB:Q9FFA7 Genevestigator:Q9FFA7 Uniprot:Q9FFA7
Length = 368
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVV--NEPADVHCPVVEMPTR------- 425
+++++ +IEFD D + ATAG+SR+I+ + S++ N + V+ T
Sbjct: 39 ASDVIGAIEFDPTDNIVATAGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICT 98
Query: 426 -SKLSCLSWNKFSKNR-IASSDYEGIVTVWDVTTQQSVMEYEEHE-KRAWSVDFSRTEPS 482
+KLS L W S R I S DY+G+V +D+ + V E +EH +R WSVD++R +
Sbjct: 99 PAKLSSLRWRPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGA 158
Query: 483 MLV--SGSDD 490
V SGSDD
Sbjct: 159 STVGASGSDD 168
>UNIPROTKB|E9PMW8 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001594 PROSITE:PS50089
PROSITE:PS50216 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736 EMBL:AL513329
EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2 IPI:IPI00979234
ProteinModelPortal:E9PMW8 SMR:E9PMW8 Ensembl:ENST00000491600
ArrayExpress:E9PMW8 Bgee:E9PMW8 Uniprot:E9PMW8
Length = 68
Score = 140 (54.3 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLL 107
+I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLV 48
>ZFIN|ZDB-GENE-060810-140 [details] [associations]
symbol:trim105 "tripartite motif containing 105"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060810-140 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104222 OMA:VEPMRIC EMBL:CR627495
IPI:IPI00993660 Ensembl:ENSDART00000080247 ArrayExpress:F1QCZ4
Bgee:F1QCZ4 Uniprot:F1QCZ4
Length = 426
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/219 (26%), Positives = 96/219 (43%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLYP 103
+ L +D+ C IC ++ KE + C H FC CI+++ +R+ CP C N +
Sbjct: 8 TSLREDLTCAICFELFKEPVMLGCMHHFCRRCIVSYWKSVRSPVTCPQCRQEFPNKCCFQ 67
Query: 104 -NFLLDKLLKKTSARQISKTASPLEN-FRQALQQGCGVSVKEIDSLMSLLSEKKRKME-- 159
N+L+ L++K A + LE L+ C S+K D+ +S++ + K KME
Sbjct: 68 TNYLVANLVEKVRASSSPASVKYLEKELNDCLESQC--SMK--DAYISMIRKDKDKMEKI 123
Query: 160 -------QEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRA 212
Q + Q L FL + ++ELK Q ++ + +ERH L A
Sbjct: 124 KKTGAELQGRVHNDFQALHHFLQVEEEAMIEELKREQEEM------LQGLERHLEALQVA 177
Query: 213 RDRYSVKLRMLGDDS-NTRKSWLSSIDKNSSGIITSSLN 250
+ +L + +T +S L + K +S LN
Sbjct: 178 IRDVEKNINILRQTAGSTDQSVLVELPKLNSRSPLQELN 216
>UNIPROTKB|E1B7M2 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:DAAA02055413
IPI:IPI00717514 Ensembl:ENSBTAT00000005888 Uniprot:E1B7M2
Length = 341
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 60/216 (27%), Positives = 95/216 (43%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQLYP 103
+L ++M+CPIC+ I+++ CGH+FC CI T +D CP C + + + P
Sbjct: 9 KLQEEMICPICLDILQDPATIDCGHNFCLSCI-TQSGEAADSVLKCPLCNKIVKRDTITP 67
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQQG--CGVSVKEIDS--LMSLLSEKK-RKM 158
N+LL L++K A S E R L+ G C E+D L + E K K
Sbjct: 68 NWLLVNLVEKIQAMDPSDMQPETEELR-CLRHGEKCHYFC-EVDGKFLCVVCRESKDHKT 125
Query: 159 EQ----EEAERNMQILLDFLHCLRKQKVDELKEIQTD-LHYIKEDINAVERHRIDLYRAR 213
EEA +N Q + + +QK E+ ++ H IK + VE + + A
Sbjct: 126 HNTTLIEEAAQNYQGRIQSQIEVLQQKEREIIQVMAQGEHCIKVSMYQVELEKEMVIEAF 185
Query: 214 DRYSVKLRMLGDDSNTRKSWLSS-IDKNSSGIITSS 248
+ L+ +R +WL I K +TS+
Sbjct: 186 RQLRKVLKEEKSFLLSRINWLGQEISKGEKLYVTST 221
>UNIPROTKB|G3MWR7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104499 EMBL:DAAA02055413 OMA:WEAELQG
Ensembl:ENSBTAT00000062975 Uniprot:G3MWR7
Length = 509
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 60/216 (27%), Positives = 95/216 (43%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQLYP 103
+L ++M+CPIC+ I+++ CGH+FC CI T +D CP C + + + P
Sbjct: 9 KLQEEMICPICLDILQDPATIDCGHNFCLSCI-TQSGEAADSVLKCPLCNKIVKRDTITP 67
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQQG--CGVSVKEIDS--LMSLLSEKK-RKM 158
N+LL L++K A S E R L+ G C E+D L + E K K
Sbjct: 68 NWLLVNLVEKIQAMDPSDMQPETEELR-CLRHGEKCHYFC-EVDGKFLCVVCRESKDHKT 125
Query: 159 EQ----EEAERNMQILLDFLHCLRKQKVDELKEIQTD-LHYIKEDINAVERHRIDLYRAR 213
EEA +N Q + + +QK E+ ++ H IK + VE + + A
Sbjct: 126 HNTTLIEEAAQNYQGRIQSQIEVLQQKEREIIQVMAQGEHCIKVSMYQVELEKEMVIEAF 185
Query: 214 DRYSVKLRMLGDDSNTRKSWLSS-IDKNSSGIITSS 248
+ L+ +R +WL I K +TS+
Sbjct: 186 RQLRKVLKEEKSFLLSRINWLGQEISKGEKLYVTST 221
>UNIPROTKB|I7GGX8 [details] [associations]
symbol:TRIM31 "Tripartite motif protein 31 isoform beta"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AB158487 UniGene:Ssc.26008 UniGene:Ssc.83065
ProteinModelPortal:I7GGX8 Ensembl:ENSSSCT00000035521 Uniprot:I7GGX8
Length = 411
Score = 142 (55.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLYP 103
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + + P
Sbjct: 8 NKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRP 67
Query: 104 NFLLDKLLKKTSARQISK 121
N+LL L++K A S+
Sbjct: 68 NWLLVNLVEKIQAMDPSE 85
Score = 53 (23.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEK--KRKMEQEEAE 164
L KL ARQ+ L++ + L + G + + L +K + K+ E
Sbjct: 228 LRKLKDSLKARQLLPPREMLQDIKPVLSRSAGFRFLSPPPVSADLEKKLNETKLRHESLI 287
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQ-TDLHYIK 196
+++ D C K D+ + ++ D HYIK
Sbjct: 288 ESLKKFQD--KCQADGKKDKSRFLKGLDKHYIK 318
>UNIPROTKB|E2RFB0 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:AAEX03004245 RefSeq:XP_546929.2 ProteinModelPortal:E2RFB0
Ensembl:ENSCAFT00000020820 GeneID:489811 KEGG:cfa:489811
NextBio:20862932 Uniprot:E2RFB0
Length = 487
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 57/211 (27%), Positives = 98/211 (46%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V V EL+ + CPIC+++ KE + CGHS+C C+++ HL ++ CP C + ++
Sbjct: 5 VSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELRCPVCQQEVDSSS 64
Query: 101 LYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLL-SEKKRK 157
PN L ++++ A Q P E+ R L C + I L LL S + +
Sbjct: 65 SPPNVSLARVIE---ALQFPGDPEPKVCEHHRNPLSLFCERDQELICGLCGLLGSHQHHR 121
Query: 158 MEQEEA--ERNMQILLDFLHCLRKQ--KVDE--LKEIQTDLHYIKE-DINA--VERHRID 208
+ R + L + L+++ KVDE K + + E D+ + + R +
Sbjct: 122 VTPASTVYSRMKEELAALISDLKREQKKVDEHIAKLVNNRTRIVNESDVFSWVIRREFQE 181
Query: 209 LYRARDRYSVKLRML-GDDSNTRKSWLSSID 238
L+ D K R L G + +TR ++S+D
Sbjct: 182 LHHLVDEE--KARCLEGLEGHTR-GLVASLD 209
>SGD|S000000662 [details] [associations]
symbol:RAD18 "E3 ubiquitin ligase" species:4932
"Saccharomyces cerevisiae" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IPI] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=IDA] [GO:0006513 "protein
monoubiquitination" evidence=IMP] [GO:0042275 "error-free
postreplication DNA repair" evidence=IGI] [GO:0042276 "error-prone
translesion synthesis" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070987
"error-free translesion synthesis" evidence=IGI] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003034 InterPro:IPR004580
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00184
SMART:SM00513 UniPathway:UPA00143 SGD:S000000662 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0003684 GO:GO:0008270
EMBL:X59720 EMBL:BK006937 GO:GO:0000790 GO:GO:0003697
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0006513 GO:GO:0070987 GO:GO:0042276
eggNOG:COG5432 KO:K10627 TIGRFAMs:TIGR00599 OMA:YICKEFF
OrthoDB:EOG4F4WMB GeneTree:ENSGT00390000011230 EMBL:X12542
EMBL:M36405 EMBL:X12588 PIR:S05802 RefSeq:NP_009992.1
ProteinModelPortal:P10862 SMR:P10862 DIP:DIP-1172N IntAct:P10862
MINT:MINT-394603 STRING:P10862 PaxDb:P10862 EnsemblFungi:YCR066W
GeneID:850430 KEGG:sce:YCR066W CYGD:YCR066w HOGENOM:HOG000248313
NextBio:966012 Genevestigator:P10862 GermOnline:YCR066W
GO:GO:0042275 Uniprot:P10862
Length = 487
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/139 (28%), Positives = 67/139 (48%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
+LD + C IC +K LT CGH+FC +CI THL N+ +CP C + L FL+
Sbjct: 21 QLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRESLLRSEFLV 80
Query: 108 DKLLKK-TSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERN 166
++++ TS R A + + + V E S + L+SE + A+ +
Sbjct: 81 SEIIQSYTSLRSSLLDALRIPK-PTPVPENEEVPGPENSSWIELISESESD-SVNAADDD 138
Query: 167 MQILLDFLHCLRKQKVDEL 185
+QI+ L K+ + ++
Sbjct: 139 LQIVATSERKLAKRSMTDI 157
>UNIPROTKB|K7GRY7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104499
EMBL:CT737425 Ensembl:ENSSSCT00000035216 Uniprot:K7GRY7
Length = 544
Score = 142 (55.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLYP 103
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + + P
Sbjct: 8 NKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRP 67
Query: 104 NFLLDKLLKKTSARQISK 121
N+LL L++K A S+
Sbjct: 68 NWLLVNLVEKIQAMDPSE 85
Score = 53 (23.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEK--KRKMEQEEAE 164
L KL ARQ+ L++ + L + G + + L +K + K+ E
Sbjct: 196 LRKLKDSLKARQLLPPREMLQDIKPVLSRSAGFRFLSPPPVSADLEKKLNETKLRHESLI 255
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQ-TDLHYIK 196
+++ D C K D+ + ++ D HYIK
Sbjct: 256 ESLKKFQD--KCQADGKKDKSRFLKGLDKHYIK 286
>UNIPROTKB|B6ICU7 [details] [associations]
symbol:TRIM31 "Tripartite motif-containing protein 31"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 CTD:11074 eggNOG:NOG310139 HOVERGEN:HBG083771
KO:K12011 OrthoDB:EOG4K0QNJ GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AP009553 RefSeq:XP_001928015.3
Ensembl:ENSSSCT00000001348 GeneID:100154496 KEGG:ssc:100154496
OMA:HDSITET Uniprot:B6ICU7
Length = 576
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLYP 103
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + + P
Sbjct: 8 NKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRP 67
Query: 104 NFLLDKLLKKTSARQISK 121
N+LL L++K A S+
Sbjct: 68 NWLLVNLVEKIQAMDPSE 85
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEK--KRKMEQEEAE 164
L KL ARQ+ L++ + L + G + + L +K + K+ E
Sbjct: 228 LRKLKDSLKARQLLPPREMLQDIKPVLSRSAGFRFLSPPPVSADLEKKLNETKLRHESLI 287
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQ-TDLHYIK 196
+++ D C K D+ + ++ D HYIK
Sbjct: 288 ESLKKFQD--KCQADGKKDKSRFLKGLDKHYIK 318
>UNIPROTKB|F1RYH5 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:11074 KO:K12011 GeneTree:ENSGT00700000104499 EMBL:CU607067
RefSeq:NP_001193331.1 UniGene:Ssc.26008 UniGene:Ssc.83065
Ensembl:ENSSSCT00000001357 GeneID:100154124 KEGG:ssc:100154124
OMA:WEAELQG Uniprot:F1RYH5
Length = 576
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLYP 103
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + + P
Sbjct: 8 NKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRP 67
Query: 104 NFLLDKLLKKTSARQISK 121
N+LL L++K A S+
Sbjct: 68 NWLLVNLVEKIQAMDPSE 85
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEK--KRKMEQEEAE 164
L KL ARQ+ L++ + L + G + + L +K + K+ E
Sbjct: 228 LRKLKDSLKARQLLPPREMLQDIKPVLSRSAGFRFLSPPPVSADLEKKLNETKLRHESLI 287
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQ-TDLHYIK 196
+++ D C K D+ + ++ D HYIK
Sbjct: 288 ESLKKFQD--KCQADGKKDKSRFLKGLDKHYIK 318
>WB|WBGene00011365 [details] [associations]
symbol:T02C1.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:Z19156 eggNOG:COG5432
PIR:S28290 RefSeq:NP_499044.1 ProteinModelPortal:Q03605 SMR:Q03605
STRING:Q03605 EnsemblMetazoa:T02C1.1 GeneID:176305
KEGG:cel:CELE_T02C1.1 UCSC:T02C1.1 CTD:176305 WormBase:T02C1.1
HOGENOM:HOG000019179 InParanoid:Q03605 OMA:DEDFCCA NextBio:892010
Uniprot:Q03605
Length = 160
Score = 124 (48.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D+D C +C+ E + CGHS+C CI +HL CP C + T N + L
Sbjct: 3 DEDFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCRAH-TGNPIRNRQLESL 61
Query: 110 LLKKTSARQIS 120
+ S+R IS
Sbjct: 62 TMSYVSSRNIS 72
>UNIPROTKB|I3L0H3 [details] [associations]
symbol:TRIM73 "Tripartite motif-containing protein 73"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC006014 HGNC:HGNC:18162
ProteinModelPortal:I3L0H3 SMR:I3L0H3 PRIDE:I3L0H3
Ensembl:ENST00000447409 Bgee:I3L0H3 Uniprot:I3L0H3
Length = 249
Score = 138 (53.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 5 VSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSS 64
Query: 101 LYPNFLL 107
PN L
Sbjct: 65 SLPNVSL 71
>UNIPROTKB|Q86UV7 [details] [associations]
symbol:TRIM73 "Tripartite motif-containing protein 73"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC006014
eggNOG:NOG245385 KO:K12024 EMBL:AF498998 IPI:IPI00328817
RefSeq:NP_944606.2 UniGene:Hs.632307 UniGene:Hs.733046
ProteinModelPortal:Q86UV7 SMR:Q86UV7 IntAct:Q86UV7 STRING:Q86UV7
DMDM:56404880 PRIDE:Q86UV7 DNASU:375593 Ensembl:ENST00000323819
Ensembl:ENST00000437796 Ensembl:ENST00000572315
Ensembl:ENST00000577020 GeneID:375593 KEGG:hsa:375593
UCSC:uc003udc.1 CTD:375593 GeneCards:GC07P075024 HGNC:HGNC:18162
MIM:612549 neXtProt:NX_Q86UV7 PharmGKB:PA38510 HOGENOM:HOG000081784
HOVERGEN:HBG094091 InParanoid:Q86UV7 PhylomeDB:Q86UV7
GenomeRNAi:375593 NextBio:100533 ArrayExpress:Q86UV7 Bgee:Q86UV7
CleanEx:HS_TRIM73 Genevestigator:Q86UV7 GermOnline:ENSG00000178809
Uniprot:Q86UV7
Length = 250
Score = 138 (53.6 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 5 VSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSS 64
Query: 101 LYPNFLL 107
PN L
Sbjct: 65 SLPNVSL 71
>UNIPROTKB|E1C7S4 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 EMBL:AADN02026109
IPI:IPI00578516 RefSeq:XP_415709.2 ProteinModelPortal:E1C7S4
Ensembl:ENSGALT00000001270 GeneID:417461 KEGG:gga:417461
OMA:MARKMSI NextBio:20820753 Uniprot:E1C7S4
Length = 492
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/233 (21%), Positives = 101/233 (43%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNN 99
+ + L+ +LCPIC+++ KE + CGHS+C C+++ L + D CP C + +
Sbjct: 5 MSIDNLEDQLLCPICLEVFKEPLMLQCGHSYCKSCVLS-LSGELDEQLLCPVCRKSVDCS 63
Query: 100 QLYPNFLLDKLLKKTSAR-QISKTASPLENFRQALQQGCGVSVKEIDSLMSLL-SEKKRK 157
PN L ++++ +R + T L C + I L + + K+ K
Sbjct: 64 ASPPNVTLARIIEALQSRGETEPTPESCPTHDNPLSLFCEADREVICGLCGTIGNHKQHK 123
Query: 158 MEQEEA-----ERNMQILLDFLH-CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYR 211
+ + + +LL +H C K+ +DEL I I + +
Sbjct: 124 ITPISTAYCRMKEELSVLLTDVHRC--KRNLDELFS-----KLINNKIRIANEADVFKWV 176
Query: 212 ARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKK 264
R + R + ++ T +L S++ ++ +ITS + ++ ++ +LQ K
Sbjct: 177 IRKEFEELHRYIDEEKAT---FLESVEGKAAQLITS-IESQVKQTSDTLQRLK 225
>UNIPROTKB|E9PFM0 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC015691
HGNC:HGNC:16277 ChiTaRS:TRIM6 IPI:IPI00470944
ProteinModelPortal:E9PFM0 SMR:E9PFM0 Ensembl:ENST00000380107
UCSC:uc009yeo.2 ArrayExpress:E9PFM0 Bgee:E9PFM0 Uniprot:E9PFM0
Length = 462
Score = 131 (51.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/183 (22%), Positives = 78/183 (42%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCCGHYLTNNQ 100
++ +++ CPIC++++ E CGHSFC CI + R + CP C
Sbjct: 8 DIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEI-DSLMSLLSE--KKRK 157
L PN L ++++ K L Q + V+E+ E KK K
Sbjct: 68 LRPNRHLANIVRRLREED-GKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK 126
Query: 158 MEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYS 217
E++EAE+ + + + Q E IQT+ + ++ ++ VE+ + ++
Sbjct: 127 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG 186
Query: 218 VKL 220
+++
Sbjct: 187 LRI 189
Score = 55 (24.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 432 SWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
S+N F++N A S Y+ W + Q + EY +E + S+ S T P
Sbjct: 355 SFNHFAQNHSAYSRYQPQSGYWVIGLQHN-HEYRAYEDSSPSLLLSMTVP 403
>UNIPROTKB|J3KQW6 [details] [associations]
symbol:TRIM73 "Tripartite motif-containing protein 73"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC006014 HGNC:HGNC:18162
ProteinModelPortal:J3KQW6 Ensembl:ENST00000430211 OMA:HHEFIQK
Uniprot:J3KQW6
Length = 282
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 5 VSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSS 64
Query: 101 LYPNFLL 107
PN L
Sbjct: 65 SLPNVSL 71
>UNIPROTKB|Q86UV6 [details] [associations]
symbol:TRIM74 "Tripartite motif-containing protein 74"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC005488 KO:K12024
HOGENOM:HOG000081784 HOVERGEN:HBG094091 EMBL:AF498999 EMBL:BC033871
IPI:IPI00328816 IPI:IPI00789257 RefSeq:NP_942150.1
UniGene:Hs.645328 ProteinModelPortal:Q86UV6 SMR:Q86UV6
IntAct:Q86UV6 STRING:Q86UV6 DMDM:56404879 PRIDE:Q86UV6 DNASU:378108
Ensembl:ENST00000285805 Ensembl:ENST00000395244
Ensembl:ENST00000571453 Ensembl:ENST00000573986 GeneID:378108
KEGG:hsa:378108 UCSC:uc003tws.1 UCSC:uc010lao.2 CTD:378108
GeneCards:GC07M072430 HGNC:HGNC:17453 MIM:612550 neXtProt:NX_Q86UV6
PharmGKB:PA38454 InParanoid:Q86UV6 OMA:REARTFH OrthoDB:EOG49ZXR6
PhylomeDB:Q86UV6 GenomeRNAi:378108 NextBio:100709
ArrayExpress:Q86UV6 Bgee:Q86UV6 CleanEx:HS_TRIM74
Genevestigator:Q86UV6 GermOnline:ENSG00000155428 Uniprot:Q86UV6
Length = 250
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 5 VSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSS 64
Query: 101 LYPNFLL 107
PN L
Sbjct: 65 SLPNVSL 71
>MGI|MGI:2684881 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 MGI:MGI:2684881 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:Q9CQJ4
GeneTree:ENSGT00700000104499 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OMA:HYKERLN
OrthoDB:EOG4W9J4P EMBL:AK136498 EMBL:BC147336 EMBL:BC147337
IPI:IPI00355276 RefSeq:NP_001028407.1 UniGene:Mm.32606
ProteinModelPortal:Q3UWA4 SMR:Q3UWA4 PhosphoSite:Q3UWA4
PRIDE:Q3UWA4 Ensembl:ENSMUST00000087158 GeneID:195359
KEGG:mmu:195359 UCSC:uc008clk.2 InParanoid:B2RVT3 NextBio:371759
Bgee:Q3UWA4 CleanEx:MM_TRIM40 Genevestigator:Q3UWA4 Uniprot:Q3UWA4
Length = 246
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 46 VSELDKDM--LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-----DCPCCGHYLTN 98
+ LDKD +CPIC+ +KEA T C H FC MC+ H+ S CP C +
Sbjct: 1 MGSLDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLTQHMDKASVSGILSCPVCRKPCSE 60
Query: 99 NQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKM 158
L N++ K+ R+ + + L + LQ S E+ S+ + +S K ++
Sbjct: 61 GVLGDNYICHTHQKRV--RRFCEASGHLL-CEECLQSPEHQSHTEL-SIENAISHYKERL 116
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDL--HYIKEDI 199
+ R ++ L L L+ Q+ L+ +Q D H ++ D+
Sbjct: 117 NRRS--RKLRKDLGNLQQLKAQEKKMLQALQVDCECHRLRTDL 157
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>DICTYBASE|DDB_G0270568 [details] [associations]
symbol:DDB_G0270568 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0270568 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5432
RefSeq:XP_646094.2 ProteinModelPortal:Q55DN7
EnsemblProtists:DDB0201772 GeneID:8617044 KEGG:ddi:DDB_G0270568
InParanoid:Q55DN7 OMA:VPPSFIN ProtClustDB:CLSZ2445168
Uniprot:Q55DN7
Length = 419
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+ V L +D+ CPIC+ I+E +CGH+FC+ C+ + CP C +Y
Sbjct: 14 IPVKSLLEDISCPICLNFIEECSTLSCGHNFCHKCVSECINRNHKCPLCNKTALKENIYR 73
Query: 104 NFLLDKLLK 112
N +K++K
Sbjct: 74 NHQFEKIIK 82
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 49/157 (31%), Positives = 73/157 (46%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQLFPDNFA 125
Query: 107 LDKLLK---KTSARQISKTASPLENFRQALQQGC---GVSVKEIDSLMSLLSEKKRKMEQ 160
++L K ++ ++T L + + L + C GV + S S +K K E
Sbjct: 126 KREILSLRVKCPSQGCTETME-LRHLERHLVR-CDFAGVECSQCQSSFPKYSLQKHKFE- 182
Query: 161 EEAERNMQILLDFLHCLRKQKV-DELKEIQT-DLHYI 195
E R QI + +C + D+L QT L Y+
Sbjct: 183 -ECPRR-QIFCE--NCAVAMALEDKLNHDQTCPLAYV 215
>UNIPROTKB|F1N2E6 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00732393
UniGene:Bt.43398 ProteinModelPortal:F1N2E6
Ensembl:ENSBTAT00000007366 ArrayExpress:F1N2E6 Uniprot:F1N2E6
Length = 488
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 55/178 (30%), Positives = 79/178 (44%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-----LRNKSDCPCCGHYLTNNQ 100
V L +++ CPIC +++ E CGHSFC CI L S CP CG +
Sbjct: 6 VMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTQYSLGN 65
Query: 101 LYPNF----LLDKLLK-KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
L+PN ++++L K K S + KT + + + L C K I L E
Sbjct: 66 LWPNLHLANIVERLRKVKLSPEEGQKTGLCVHH-EEKLLLFCKEDRKVICRLCERSQEHH 124
Query: 156 --RKMEQEEAERNMQILLDF-LHCLRK--QKVDELK-EIQTDLHYIKEDINAVERHRI 207
EEA + Q +L L LRK QK ++L+ +I+ + K I ER RI
Sbjct: 125 GHHTFLMEEALKESQEMLQAALTRLRKEQQKAEKLEADIREERTSWKYQIQT-ERQRI 181
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 432 SWN---KFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR 470
SW + + RI +++ + ++ D Q+ + + EE EK+
Sbjct: 169 SWKYQIQTERQRI-QTEFNQLRSILDSEEQRELQKLEEEEKK 209
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 135 (52.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLL 111
++L
Sbjct: 125 KREIL 129
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 24/111 (21%), Positives = 50/111 (45%)
Query: 117 RQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK-RKMEQEEAERNMQILLDFLH 175
R S S + NF++ +QQ G V++ + L ++ + + M E +R ++ L D +
Sbjct: 303 RPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVA 362
Query: 176 CLRKQKVDEL---KEIQTDLHY-IKEDINAVERHRIDLYRARDRYSVKLRM 222
+ Q+ + + K +H +E+ V H Y + Y + +R+
Sbjct: 363 EIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRL 413
>UNIPROTKB|Q865W2 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 EMBL:AY081951 RefSeq:NP_999351.1
UniGene:Ssc.17223 ProteinModelPortal:Q865W2
Ensembl:ENSSSCT00000008446 GeneID:397383 KEGG:ssc:397383
ArrayExpress:Q865W2 Uniprot:Q865W2
Length = 486
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/211 (25%), Positives = 98/211 (46%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V V EL+ + CP+C+++ KE + CGHS+C C+++ HL ++ CP C + ++
Sbjct: 5 VSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSSS 64
Query: 101 LYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLL-SEKKRK 157
PN L ++++ A Q+ P + R L C + I L LL S + +
Sbjct: 65 SPPNVSLARVIE---ALQLPGDPEPQVCTHHRNPLSLFCEKDQELICGLCGLLGSHQHHR 121
Query: 158 MEQEEA--ERNMQILLDFLHCLRKQ--KVDE--LKEIQTDLHYIKE-DINA--VERHRID 208
+ R + L + L+++ KV+E K + + E D+ + + R +
Sbjct: 122 VTPVSTVYSRMKEELAALISDLKQEQKKVEEQVAKLVNNRTRIVNESDVFSWVIRREFQE 181
Query: 209 LYRARDRYSVKLRML-GDDSNTRKSWLSSID 238
L+ D K R L G + +TR ++S+D
Sbjct: 182 LHHLVDEE--KARCLEGVEGHTR-GLVASLD 209
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 132 (51.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQLYP- 103
L+ CPIC+ ++EA T CGH FC CI+ +R D CP L NQL+P
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRRCRDAGHKCPVDNEILLENQLFPD 123
Query: 104 NFLLDKLLKKT 114
NF ++L T
Sbjct: 124 NFAKREILSLT 134
Score = 52 (23.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/102 (20%), Positives = 49/102 (48%)
Query: 126 LENFRQALQQGCGVSVKEIDSLMSLLSEKK-RKMEQEEAERNMQILLDFLHCLRKQKVDE 184
+ENF++ +QQ G V++ + L+++ + + E +R ++ L + + Q+ +
Sbjct: 318 VENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRDLEGKITEMEAQQCNG 377
Query: 185 LK--EIQ--TDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+ +I+ + L +E+ V H Y + Y + LR+
Sbjct: 378 IYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRL 419
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 131 (51.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQE----EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
KR ++ E E ++ + L L +R + + + Q YI+
Sbjct: 135 KRLLQSEPENPSLETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIE 180
>UNIPROTKB|F1RWB5 [details] [associations]
symbol:F1RWB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009701 OMA:MEEVANQ Uniprot:F1RWB5
Length = 341
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
+++L + CPIC+ +++ T CGH+FC+ C++ L+ CP C + + L
Sbjct: 7 LAQLQAEASCPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPDRSLR 66
Query: 103 PN----FLLD--KLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
N ++D K L T ++ + PL E Q L C ++ + + S
Sbjct: 67 RNTQLCHMVDVVKQLPNTRRKRKRQEEKPLCEKHHQVLSLFCEEDLELLCPQCKISSHHG 126
Query: 156 RK----MEQEEA--ERNMQILLDFLHCLRKQKVDELKEIQTDLHY-IKEDINAVERHRID 208
ME A + ++ + FL R ++VDE EIQT Y + E++ A +R+++
Sbjct: 127 GHLVVPMELAAACHRKKLKGFIKFL-TKRLEEVDEALEIQTSKAYHLMEEV-ANQRNKLQ 184
Query: 209 L 209
+
Sbjct: 185 V 185
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 138 (53.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ LR+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHKCPVDNEILMENQLFPDNFA 125
Query: 107 LDKLLK---KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLL--SEKKRKMEQE 161
++L K ++ ++T L + + L Q C + E S ++ ME E
Sbjct: 126 KREILSLKVKCPSQGCTETME-LRHLERHLGQ-CQFASVECSQCQGSFPKSRLEKHMEHE 183
Query: 162 EAERNM 167
R +
Sbjct: 184 CGRRKI 189
Score = 45 (20.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 276 HQRKDSLTGSDSQCLNQSGLS-VVRKKRVHAQFNDLQEC---YLQKRRQMANQPHTKQES 331
HQ ++ + ++QC + L +R D C ++ K + + T++E
Sbjct: 345 HQIRELIAKMETQCTYVNELKHTIRSLEDKLLDVDGHHCNGVFIWKIKGFSGLQKTQEEE 404
Query: 332 DKNIIHREGYNAGLADFQSVL 352
+IH G+ G ++ L
Sbjct: 405 KPVVIHSPGFYTGKPGYKLCL 425
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>UNIPROTKB|A7XUJ6 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9823 "Sus scrofa" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0046849 "bone remodeling" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005938 GO:GO:0005634 GO:GO:0007165
GO:GO:0042981 GO:GO:0005811 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:EU095967
RefSeq:NP_001098756.1 UniGene:Ssc.96412 ProteinModelPortal:A7XUJ6
SMR:A7XUJ6 STRING:A7XUJ6 Ensembl:ENSSSCT00000014516
Ensembl:ENSSSCT00000033074 GeneID:396629 KEGG:ssc:396629
Uniprot:A7XUJ6
Length = 541
Score = 138 (53.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLLKKT 114
++L T
Sbjct: 125 KREILSLT 132
>UNIPROTKB|E1BNQ6 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:DAAA02058197 IPI:IPI00688074 RefSeq:NP_001193185.1
UniGene:Bt.112402 ProteinModelPortal:E1BNQ6 PRIDE:E1BNQ6
Ensembl:ENSBTAT00000007623 GeneID:616685 KEGG:bta:616685
NextBio:20900262 Uniprot:E1BNQ6
Length = 487
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V V EL+ + CP+C+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 5 VSVPELEDRLQCPMCLEVFKEPLMLQCGHSYCKGCLVSLSHHLASELRCPVCRQEVDYSS 64
Query: 101 LYPNFLLDKLLK 112
PN L K+++
Sbjct: 65 SPPNVSLAKVIE 76
>MGI|MGI:2385051 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:2385051 Prosite:PS00518 GO:GO:0005739
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:CH466559 HOGENOM:HOG000234133
CTD:11074 eggNOG:NOG310139 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EMBL:AK033650 EMBL:BC026666 IPI:IPI00153211 RefSeq:NP_666189.1
UniGene:Mm.213417 HSSP:Q92021 ProteinModelPortal:Q8R0K2 SMR:Q8R0K2
STRING:Q8R0K2 PRIDE:Q8R0K2 Ensembl:ENSMUST00000078438 GeneID:224762
KEGG:mmu:224762 UCSC:uc008cll.1 GeneTree:ENSGT00700000104499
InParanoid:Q8R0K2 NextBio:377349 Bgee:Q8R0K2 Uniprot:Q8R0K2
Length = 507
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI--ITHLRNKSDCPCCGHYLTNNQLYPNF 105
+L +++ CPICM+I+++ CGH+FC CI + K CP C + N PN
Sbjct: 9 QLQEEVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTSEKIQCPLCKLSVNKNTFRPNK 68
Query: 106 LLDKLLKKTSAR-----QISKTASPLENFRQALQQGC 137
LL L +K + Q K S + ++ L C
Sbjct: 69 LLASLAEKIQSMDPADIQAEKEDSRCQRHKEKLHYFC 105
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
Score = 42 (19.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF-----NDLQEC-YLQKRRQMANQ 324
S R DS+TGS + +Q L RKK + F ND++ LQK N+
Sbjct: 277 SEAKSRHDSITGSLKKFKDQ--LQADRKKDENRFFKSMNKNDMKSWGLLQKNNHKMNK 332
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
Score = 42 (19.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF-----NDLQEC-YLQKRRQMANQ 324
S R DS+TGS + +Q L RKK + F ND++ LQK N+
Sbjct: 277 SEAKSRHDSITGSLKKFKDQ--LQADRKKDENRFFKSMNKNDMKSWGLLQKNNHKMNK 332
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
Score = 42 (19.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF-----NDLQEC-YLQKRRQMANQ 324
S R DS+TGS + +Q L RKK + F ND++ LQK N+
Sbjct: 277 SEAKSRHDSITGSLKKFKDQ--LQADRKKDENRFFKSMNKNDMKSWGLLQKNNHKMNK 332
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
Score = 42 (19.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF-----NDLQEC-YLQKRRQMANQ 324
S R DS+TGS + +Q L RKK + F ND++ LQK N+
Sbjct: 277 SEAKSRHDSITGSLKKFKDQ--LQADRKKDENRFFKSMNKNDMKSWGLLQKNNHKMNK 332
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
Score = 42 (19.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF-----NDLQEC-YLQKRRQMANQ 324
S R DS+TGS + +Q L RKK + F ND++ LQK N+
Sbjct: 277 SEAKSRHDSITGSLKKFKDQ--LQADRKKDENRFFKSMNKNDMKSWGLLQKNNHKMNK 332
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC CI T + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCI-TQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
Score = 42 (19.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF-----NDLQEC-YLQKRRQMANQ 324
S R DS+TGS + +Q L RKK + F ND++ LQK N+
Sbjct: 277 SEAKSRHDSITGSLKKFKDQ--LQADRKKDENRFFKSMNKNDMKSWGLLQKNNHKMNK 332
>UNIPROTKB|D6RAH9 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00966985
ProteinModelPortal:D6RAH9 SMR:D6RAH9 Ensembl:ENST00000510143
HOGENOM:HOG000207449 ArrayExpress:D6RAH9 Bgee:D6RAH9 Uniprot:D6RAH9
Length = 99
Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
E+D D++C IC+Q + + T CGH++C +C+ L K CP
Sbjct: 34 EVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCP 76
>UNIPROTKB|D6RB76 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00967553
ProteinModelPortal:D6RB76 SMR:D6RB76 Ensembl:ENST00000512247
ArrayExpress:D6RB76 Bgee:D6RB76 Uniprot:D6RB76
Length = 90
Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
E+D D++C IC+Q + + T CGH++C +C+ L K CP
Sbjct: 34 EVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCP 76
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 47 SELDKDMLCPICMQIIKEAF-LTACGHSFCYMCIITHLRNK-SDCPCC-GHYLTNNQLYP 103
S + D CP+C +++K TAC H FC C +T +R + CP C G+ + P
Sbjct: 10 SYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACP 69
Query: 104 NFLLD--KLLKKTS 115
LD +++K S
Sbjct: 70 ERALDLENIMRKFS 83
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 47 SELDKDMLCPICMQIIKEAF-LTACGHSFCYMCIITHLRNK-SDCPCC-GHYLTNNQLYP 103
S + D CP+C +++K TAC H FC C +T +R + CP C G+ + P
Sbjct: 10 SYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACP 69
Query: 104 NFLLD--KLLKKTS 115
LD +++K S
Sbjct: 70 ERALDLENIMRKFS 83
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCI-ITHLRNKS-----DCPCCGH-YLTNNQL 101
+ +++ CPIC++++KE T C HSFC CI I + N++ CP C YL N L
Sbjct: 9 IKEEVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCYLFRN-L 67
Query: 102 YPN 104
PN
Sbjct: 68 RPN 70
>UNIPROTKB|Q9C030 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0070206 "protein
trimerization" evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 EMBL:CH471064 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
eggNOG:NOG259921 KO:K11999 EMBL:AB039903 UniGene:Hs.729048
GermOnline:ENSG00000121236 EMBL:AF220030 EMBL:AK027664
EMBL:AK290172 EMBL:BC047564 IPI:IPI00552150 IPI:IPI00940053
RefSeq:NP_001003818.1 RefSeq:NP_001185573.1 RefSeq:NP_001185574.1
RefSeq:NP_477514.1 ProteinModelPortal:Q9C030 SMR:Q9C030
STRING:Q9C030 PhosphoSite:Q9C030 DMDM:25009488 PaxDb:Q9C030
PRIDE:Q9C030 Ensembl:ENST00000278302 Ensembl:ENST00000380097
GeneID:117854 KEGG:hsa:117854 UCSC:uc001mbc.2 UCSC:uc001mbd.3
CTD:117854 GeneCards:GC11P005617 HGNC:HGNC:16277 MIM:607564
neXtProt:NX_Q9C030 PharmGKB:PA38110 OMA:CNCVIPM ChiTaRS:TRIM6
GenomeRNAi:117854 NextBio:80243 ArrayExpress:Q9C030 Bgee:Q9C030
Genevestigator:Q9C030 Uniprot:Q9C030
Length = 488
Score = 104 (41.7 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCCGHYLTNNQ 100
++ +++ CPIC++++ E CGHSFC CI + R + CP C
Sbjct: 8 DIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 67
Query: 101 LYPNFLLDKLLKK 113
L PN L ++++
Sbjct: 68 LRPNRHLANIVRR 80
Score = 60 (26.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 15/69 (21%), Positives = 34/69 (49%)
Query: 152 SEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYR 211
S KK K E++EAE+ + + + Q E IQT+ + ++ ++ VE+ +
Sbjct: 147 SLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLE 206
Query: 212 ARDRYSVKL 220
++ +++
Sbjct: 207 QEEKKGLRI 215
Score = 55 (24.4 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 432 SWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
S+N F++N A S Y+ W + Q + EY +E + S+ S T P
Sbjct: 381 SFNHFAQNHSAYSRYQPQSGYWVIGLQHN-HEYRAYEDSSPSLLLSMTVP 429
Score = 46 (21.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 22/86 (25%), Positives = 44/86 (51%)
Query: 127 ENFRQALQQGCGVSVKEIDSLMSLLSEKKRKME-QEEAER-NMQILLDFL-HCLRKQKVD 183
E F+++L++ +E + L + + EKK + Q E ER +Q + L + L + +
Sbjct: 142 EKFQESLKK-LKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQR 200
Query: 184 ELKEIQTDLHYIKEDINAVERHRIDL 209
ELK+++ + K+ + +E DL
Sbjct: 201 ELKKLEQEE---KKGLRIIEEAENDL 223
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>UNIPROTKB|F1RWB2 [details] [associations]
symbol:TRIM61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
EMBL:CU693419 Ensembl:ENSSSCT00000009704 OMA:ISDHIST Uniprot:F1RWB2
Length = 460
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/279 (20%), Positives = 117/279 (41%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
+++L + CPIC+ +++ T CGH+FC+ CI+ L+ CP C + + L
Sbjct: 7 LAQLQAEASCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPDRSLR 66
Query: 103 PNF----LLD--KLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
N ++D K L T ++ + PL E Q L C E D + LL +
Sbjct: 67 RNTQLCRMVDVVKQLPNTRRKRKRQEEKPLCEKHHQVLSLFC-----EED--LELLCPQC 119
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARD- 214
R + + + + + C RK+ +K+ I + +H + Y+A +
Sbjct: 120 R-VSSDHCDHPLVPMEQAAACHRKR--------------LKDSIERLTKHLEEAYKALEM 164
Query: 215 RYSVKLRMLGDDSNTRKSWLSSID--KNSSGIITSSLNARGGSSAGSLQNKKGDGKAQAN 272
+ S ++ + N + ++ K+ G + ++ R +Q+K + Q +
Sbjct: 165 QVSKSYELMWEVENQKSKLQLEVEHMKHFLGKMHDDIHFRLLKEEKDVQDKMIEKNNQLS 224
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQ 311
H K L + +C+ ++ +++H+ F +L+
Sbjct: 225 DHISMLKTLLDDINDKCVQPDTNLLMGIEKIHSTFENLE 263
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 144 (55.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 55/178 (30%), Positives = 79/178 (44%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-----LRNKSDCPCCGHYLTNNQ 100
V L +++ CPIC +++ E CGHSFC CI L S CP CG +
Sbjct: 362 VMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTQYSLGN 421
Query: 101 LYPNF----LLDKLLK-KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
L+PN ++++L K K S + KT + + + L C K I L E
Sbjct: 422 LWPNLHLANIVERLRKVKLSPEEGQKTGLCVHH-EEKLLLFCKEDRKVICRLCERSQEHH 480
Query: 156 --RKMEQEEAERNMQILLDF-LHCLRK--QKVDELK-EIQTDLHYIKEDINAVERHRI 207
EEA + Q +L L LRK QK ++L+ +I+ + K I ER RI
Sbjct: 481 GHHTFLMEEALKESQEMLQAALTRLRKEQQKAEKLEADIREERTSWKYQIQT-ERQRI 537
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 432 SWN---KFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR 470
SW + + RI +++ + ++ D Q+ + + EE EK+
Sbjct: 525 SWKYQIQTERQRI-QTEFNQLRSILDSEEQRELQKLEEEEKK 565
>UNIPROTKB|Q8N448 [details] [associations]
symbol:LNX2 "Ligand of Numb protein X 2" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478
PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184 SMART:SM00228
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 eggNOG:NOG236845 HOGENOM:HOG000261605
HOVERGEN:HBG039539 KO:K10692 EMBL:AL138699 EMBL:BC036755
EMBL:AK172771 IPI:IPI00171047 RefSeq:NP_699202.1 UniGene:Hs.132359
PDB:2VWR PDBsum:2VWR ProteinModelPortal:Q8N448 SMR:Q8N448
IntAct:Q8N448 STRING:Q8N448 PhosphoSite:Q8N448 DMDM:29840784
PeptideAtlas:Q8N448 PRIDE:Q8N448 Ensembl:ENST00000316334
GeneID:222484 KEGG:hsa:222484 UCSC:uc001url.4 CTD:222484
GeneCards:GC13M028120 HGNC:HGNC:20421 HPA:HPA040698 MIM:609733
neXtProt:NX_Q8N448 PharmGKB:PA134899015 InParanoid:Q8N448
OMA:EKDFCPL OrthoDB:EOG4ZW59N PhylomeDB:Q8N448 ChiTaRS:LNX2
EvolutionaryTrace:Q8N448 GenomeRNAi:222484 NextBio:91602
Bgee:Q8N448 CleanEx:HS_LNX2 Genevestigator:Q8N448
GermOnline:ENSG00000139517 Uniprot:Q8N448
Length = 690
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/133 (30%), Positives = 60/133 (45%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG---HY--LTNNQL 101
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP H+ + +
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSI 101
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQ 160
+ LLDKLL + K + L+ C G S + + L +K Q
Sbjct: 102 LVHKLLDKLLVLCPFSSVCKDVMQRCDLEAHLKNRCPGASHRRV-----ALERRKTSRTQ 156
Query: 161 EEAER-NMQILLD 172
E E N LLD
Sbjct: 157 AEIENENGPTLLD 169
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/196 (20%), Positives = 87/196 (44%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
L PN L ++++ ++S + + + + KE ++ + E ++ +
Sbjct: 68 LRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCELSQEHQG 127
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV-- 218
+ R +++ + L+ +KE Q + +++DI ER Y +R +
Sbjct: 128 HQTFRINEVVKECQEKLQVALQRLIKEDQ-EAEKLEDDIRQ-ERTAWKNYIQIERQKILK 185
Query: 219 ---KLRMLGDDSNTRK 231
++R++ D+ R+
Sbjct: 186 GFNEMRVILDNEEQRE 201
>POMBASE|SPCC548.05c [details] [associations]
symbol:SPCC548.05c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034080 "CENP-A containing nucleosome assembly at
centromere" evidence=ISO] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPCC548.05c Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GO:GO:0044732 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006368 GO:GO:0004842 GO:GO:0034080
InterPro:IPR017907 OrthoDB:EOG4R53CF HSSP:Q9CQJ4 eggNOG:NOG260903
RefSeq:NP_587745.1 ProteinModelPortal:Q9P3U8
EnsemblFungi:SPCC548.05c.1 GeneID:2539314 KEGG:spo:SPCC548.05c
NextBio:20800479 Uniprot:Q9P3U8
Length = 468
Score = 134 (52.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
++ K + CPIC + ++ F T CGH++CY C++ L+ CP C L Q P +L+
Sbjct: 78 KIKKTLECPICTEALQRPFTTHCGHTYCYECLLNWLKESKSCPTCRQKLYT-QPSPAYLV 136
Query: 108 DKLLKKTSARQISKTASPL 126
+++ +A S + PL
Sbjct: 137 YEIMNVVAA---SNSGFPL 152
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/68 (25%), Positives = 24/68 (35%)
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGS-SAGSLQNKKGDGKAQANSHGHQRKDS 281
+ DD ++ + W + S + N RGG+ S N G A R D
Sbjct: 214 ISDDQDSGREWFWDGENAESDSSLNGDNTRGGNISTNRAFNNMGHAPITAVPQDWLRFDE 273
Query: 282 ---LTGSD 286
GSD
Sbjct: 274 GEEFVGSD 281
Score = 37 (18.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/42 (33%), Positives = 15/42 (35%)
Query: 200 NAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNS 241
N V R Y RY R L D N L+S NS
Sbjct: 355 NMVSRSET-CYNDGQRYDELRRELADIQNESLDSLNSSSNNS 395
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 134 (52.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ LRN CP L QL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAGHKCPVDNEILMEKQLFPDNFA 125
Query: 107 LDKLL 111
++L
Sbjct: 126 KREIL 130
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 445 DYEGIVTVWDV--TTQQSVMEYEEHEKRAWSVDFSRTEPSML 484
DY+ ++ W + T + S+++ E R V+ T+P +L
Sbjct: 451 DYDSLLP-WPLQGTIRLSILDQSESTARQDQVEVMDTKPDLL 491
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIIT--HLRNKSD-CPCCGHYLTNNQLYPNFLLDK 109
C IC+++ +E +T CGH FC+ C+ H +KS+ CP C + + L P + + K
Sbjct: 19 CNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKEDTLVPLYGMGK 76
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/210 (20%), Positives = 93/210 (44%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
L PN L ++++ ++S + + + + KE ++ + E ++ +
Sbjct: 68 LRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCELSQEHQG 127
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV-- 218
+ R +++ + L+ +KE Q + +++DI ER Y +R +
Sbjct: 128 HQTFRINEVVKECQEKLQVALQRLIKEDQ-EAEKLEDDIRQ-ERTAWKNYIQIERQKILK 185
Query: 219 ---KLRMLGDDSNTRKSWLSSIDKNSSGII 245
++R++ D+ R+ L +++ ++
Sbjct: 186 GFNEMRVILDNEEQRE--LQKLEEGEVNVL 213
>ZFIN|ZDB-GENE-081030-6 [details] [associations]
symbol:trim35-38 "tripartite motif containing 35-38"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-6 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00859170 Ensembl:ENSDART00000036309
Uniprot:E7F326
Length = 450
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS--DCPCCGHYLTNNQLYPN 104
S + D +CP+C +I K + +C HSFC C+ RNK+ +CP C + N
Sbjct: 3 SSAEYDYICPVCQEIFKTPVILSCSHSFCKECLQQFWRNKNTQECPVCRRRSSKENPPVN 62
Query: 105 FLLDKL----LKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKME- 159
L L LK+ + R+IS + + L+ C + K+ L+ SEK K
Sbjct: 63 LALQNLCESFLKERNERRISGSEEICSLHSEKLKLFC-LEDKQPVCLVCRDSEKHLKHTF 121
Query: 160 ---QEEAERNMQILLDFLHCLRKQ-KV-DELK-EIQTDLHYIKEDINAVER 204
E A + L L L+++ K+ +E+K E + +IK ER
Sbjct: 122 RPISEMAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQHIKAQAEHTER 172
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>RGD|1308607 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 RGD:1308607
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 OrthoDB:EOG4K0QNJ
GeneTree:ENSGT00700000104499 IPI:IPI00768380
Ensembl:ENSRNOT00000061558 UCSC:RGD:1308607 Uniprot:D3ZN56
Length = 508
Score = 133 (51.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGHYLTNNQLYP 103
S+L +D+ CPIC++I+++ CGH+FC CI + S+ CP C ++ N P
Sbjct: 8 SQLQEDVTCPICLEILQDPVTIDCGHNFCLKCI-NQIGKTSENILCPLCKCSVSKNTFRP 66
Query: 104 NFLLDKLLKK 113
N LL L +K
Sbjct: 67 NKLLASLAEK 76
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 380 SSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKN 439
SSIE +D A + +R K F F S + P D+ E R + S +F N
Sbjct: 241 SSIELLKD----AEDTLQQRNKEFQFLSPIPVPVDLEKKRSEAKARLESVLKSLTEFKDN 296
>ZFIN|ZDB-GENE-040426-745 [details] [associations]
symbol:rad18 "RAD18 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
Prosite:PS00518 ZFIN:ZDB-GENE-040426-745 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P28990 eggNOG:COG5432
KO:K10627 CTD:56852 HOGENOM:HOG000234845 HOVERGEN:HBG054721
OrthoDB:EOG4RFKTF EMBL:BC044430 IPI:IPI00608781 RefSeq:NP_956431.1
UniGene:Dr.81359 ProteinModelPortal:Q803L3 STRING:Q803L3
GeneID:393106 KEGG:dre:393106 InParanoid:Q803L3 NextBio:20814179
ArrayExpress:Q803L3 Uniprot:Q803L3
Length = 426
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+D + CPIC + + + +T C H+FC +CI L K CP C T L N LLD
Sbjct: 19 MDTLLRCPICFEFLNISMMTQCSHNFCSLCIRKFLSYKLLCPVCNSPSTEQDLRNNRLLD 78
Query: 109 KLLKK-TSARQ 118
L++ +ARQ
Sbjct: 79 DLVQSFQTARQ 89
>UNIPROTKB|E7EUM2 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946315
ProteinModelPortal:E7EUM2 SMR:E7EUM2 Ensembl:ENST00000478531
UCSC:uc002idc.1 ArrayExpress:E7EUM2 Bgee:E7EUM2 Uniprot:E7EUM2
Length = 623
Score = 131 (51.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQE----EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
KR ++ E E ++ + L L +R + + + Q YI+
Sbjct: 135 KRLLQSEPENPSLETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIE 180
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 198 DINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSA 257
D+N E+ + R ++Y + G +S T S S + S I+T+ +
Sbjct: 244 DLNTTEKRAAE--RHPEKYQGEAAS-GCESETSVSEDCSGLSSQSDILTTQQRDTMQHNL 300
Query: 258 GSLQNKKGDGKAQANSHGHQRKDSLTG--SDSQCL 290
LQ + + +A HG Q +S SDS L
Sbjct: 301 IKLQQEMAELEAVLEQHGSQPSNSYPSIISDSSAL 335
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
>ZFIN|ZDB-GENE-040426-1000 [details] [associations]
symbol:trim47 "tripartite motif containing 47"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-040426-1000 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q92021
GeneTree:ENSGT00700000104222 CTD:91107 eggNOG:NOG265106
EMBL:BX511060 EMBL:BC049412 IPI:IPI00488420 RefSeq:NP_956578.1
UniGene:Dr.105276 Ensembl:ENSDART00000079207 GeneID:393254
KEGG:dre:393254 HOGENOM:HOG000146434 OrthoDB:EOG4T1HMM
NextBio:20814315 Uniprot:Q7ZU70
Length = 479
Score = 130 (50.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 28/84 (33%), Positives = 39/84 (46%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-NKSD-----CPCCGHYLTNNQL 101
EL K+++C IC+ + + CGH+FC MCI+ H N D CP C
Sbjct: 10 ELQKELVCSICLDYFDDPVILKCGHNFCRMCILMHWEENGGDDVGYQCPECRMVFAKMSF 69
Query: 102 YPNFLLDKLLKKTSARQISKTASP 125
N+L+ L+ K S KT P
Sbjct: 70 TKNYLVKNLVDKLSDFDYLKTCRP 93
Score = 44 (20.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 371 DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEP 412
D ++S + +++DR F A +RI ++F + +EP
Sbjct: 418 DYWNSPRVGVFLDYDRGHVTFFDAVTMKRI--YNFVTYFDEP 457
>UNIPROTKB|Q86XT4 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC073841
HOGENOM:HOG000234133 EMBL:AY081948 EMBL:AY081949 IPI:IPI00173642
IPI:IPI00477038 RefSeq:NP_835226.1 UniGene:Hs.647053
ProteinModelPortal:Q86XT4 SMR:Q86XT4 STRING:Q86XT4
PhosphoSite:Q86XT4 DMDM:56404881 PRIDE:Q86XT4
Ensembl:ENST00000333149 Ensembl:ENST00000453152 GeneID:135892
KEGG:hsa:135892 UCSC:uc003txy.1 UCSC:uc003txz.1 CTD:135892
GeneCards:GC07M072726 HGNC:HGNC:19017 HPA:HPA019862 MIM:612548
neXtProt:NX_Q86XT4 PharmGKB:PA38778 eggNOG:NOG245385
HOVERGEN:HBG106596 InParanoid:Q86XT4 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 PhylomeDB:Q86XT4 GenomeRNAi:135892 NextBio:83506
ArrayExpress:Q86XT4 Bgee:Q86XT4 CleanEx:HS_TRIM50
Genevestigator:Q86XT4 GermOnline:ENSG00000146755 Uniprot:Q86XT4
Length = 487
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 5 VSLLELEDWLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSS 64
Query: 101 LYPNFLLDKLLK 112
PN L ++++
Sbjct: 65 SLPNVSLARVIE 76
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>RGD|1359645 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
RGD:1359645 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX883051 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OrthoDB:EOG4W9J4P
IPI:IPI00422032 RefSeq:NP_001009175.1 UniGene:Rn.215808
ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8 GeneID:365528
KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8 NextBio:687589
Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 49 LDKDM--LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-----DCPCCGHYLTNNQL 101
LDKD +CPIC+ +KEA T C H FC MC+I H+ S CP C + L
Sbjct: 4 LDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSETVL 63
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
N++ K+ R + L + LQ + E+ S+ + +S K ++ +
Sbjct: 64 GDNYICHTHQKRV-CRFCESSRHLL--CEECLQSPEHRAHTEL-SIENAISHYKERLNRR 119
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTD 191
R ++ L L L+ Q+ L+ +Q D
Sbjct: 120 S--RKLRKDLGDLQRLKAQEEKMLQALQVD 147
>UNIPROTKB|Q6MFY8 [details] [associations]
symbol:Trim40 "Tripartite motif-containing protein 40"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 RGD:1359645 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BX883051 CTD:135644
eggNOG:NOG263238 HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016
OrthoDB:EOG4W9J4P IPI:IPI00422032 RefSeq:NP_001009175.1
UniGene:Rn.215808 ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8
GeneID:365528 KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8
NextBio:687589 Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 49 LDKDM--LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-----DCPCCGHYLTNNQL 101
LDKD +CPIC+ +KEA T C H FC MC+I H+ S CP C + L
Sbjct: 4 LDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSETVL 63
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
N++ K+ R + L + LQ + E+ S+ + +S K ++ +
Sbjct: 64 GDNYICHTHQKRV-CRFCESSRHLL--CEECLQSPEHRAHTEL-SIENAISHYKERLNRR 119
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTD 191
R ++ L L L+ Q+ L+ +Q D
Sbjct: 120 S--RKLRKDLGDLQRLKAQEEKMLQALQVD 147
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>UNIPROTKB|C9J0Q4 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0045910 EMBL:AC068312
EMBL:AC008151 EMBL:AC034186 HGNC:HGNC:18278 HOGENOM:HOG000234845
IPI:IPI00879143 ProteinModelPortal:C9J0Q4 SMR:C9J0Q4 STRING:C9J0Q4
Ensembl:ENST00000413832 ArrayExpress:C9J0Q4 Bgee:C9J0Q4
Uniprot:C9J0Q4
Length = 92
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 52 DML-CPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D+L C IC + A + C H++C +CI L K+ CP C +T L N +LD+
Sbjct: 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDE 80
Query: 110 LLK 112
L+K
Sbjct: 81 LVK 83
>MGI|MGI:104537 [details] [associations]
symbol:Brca1 "breast cancer 1" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0005813 "centrosome" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006633 "fatty acid biosynthetic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=ISO] [GO:0007098
"centrosome cycle" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IDA]
[GO:0010212 "response to ionizing radiation" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISO;IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0043009 "chordate embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=ISO] [GO:0045739
"positive regulation of DNA repair" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051298 "centrosome duplication"
evidence=TAS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO;IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO;IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=ISO;IMP] [GO:0070531 "BRCA1-A complex"
evidence=ISO] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] [GO:0071681 "cellular response to
indole-3-methanol" evidence=ISO] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISO] [GO:2000145 "regulation of cell
motility" evidence=ISO] [GO:2000617 "positive regulation of histone
H3-K9 acetylation" evidence=ISO;IMP] [GO:2000620 "positive
regulation of histone H4-K16 acetylation" evidence=ISO;IMP]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:104537 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0008630 GO:GO:0005654
GO:GO:0051298 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0045944 GO:GO:0006633
GO:GO:0003723 GO:GO:0044212 GO:GO:0045717 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794
GO:GO:0004842 GO:GO:0006349 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
Reactome:REACT_27235 GO:GO:0031436 GO:GO:0085020 GO:GO:0051572
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0051573 GO:GO:0051571 GO:GO:2000617
GO:GO:2000620 GO:GO:0070512 EMBL:U31625 EMBL:U35641 EMBL:U32446
EMBL:U36475 EMBL:AL590996 EMBL:U33835 IPI:IPI00331711
IPI:IPI00421063 PIR:I49350 RefSeq:NP_033894.3 UniGene:Mm.244975
ProteinModelPortal:P48754 DIP:DIP-41981N STRING:P48754
PhosphoSite:P48754 PRIDE:P48754 Ensembl:ENSMUST00000017290
GeneID:12189 KEGG:mmu:12189 GeneTree:ENSGT00440000034289
InParanoid:P48754 OMA:CMLKLLN NextBio:280581 CleanEx:MM_BRCA1
Genevestigator:P48754 GermOnline:ENSMUSG00000017146 GO:GO:0043009
GO:GO:0009048 GO:GO:0035067 GO:GO:0051574 GO:GO:0044030
Uniprot:P48754
Length = 1812
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPN- 104
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGST 77
Query: 105 -F--LLDKLLKKTSARQISKTASPLEN---FRQALQQGCGVSVKEIDSLMSL-LSEKKRK 157
F L ++LL+ +A ++ T L N F + C +E + S+ + R+
Sbjct: 78 RFSQLAEELLRIMAAFELD-TGMQLTNGFSFSKKRNNSCERLNEEASIIQSVGYRNRVRR 136
Query: 158 MEQEEA-----ERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
+ Q E + ++ + L L +R K + + + YI+ D ++ E
Sbjct: 137 LPQVEPGNATLKDSLGVQLSNLGIVRSVKKNRQTQPRKKSVYIELDSDSSE 187
Score = 60 (26.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 196 KEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWL--SSIDKNSSGIITSSLNARG 253
K D V+R ++ + D + + SN +++ + S++ K S T SL
Sbjct: 513 KADSAGVQRTPDNINQGTDLMEPNEQAVSTTSNCQENKIAGSNLQKEKSAHPTESLRKEP 572
Query: 254 GSSAG--SLQNKKGDGKAQANSHGHQ--RKDSLTGSDS-QC 289
S+AG S+ N D + + N H + +K+ L S +C
Sbjct: 573 ASTAGAKSISNSVSDLEVELNVHSSKAPKKNRLRRKSSIRC 613
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE R Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAREYQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|F1ND52 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AADN02014962 IPI:IPI00578455 Ensembl:ENSGALT00000025265
Uniprot:F1ND52
Length = 190
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN + CP C LT+ Q +P ++
Sbjct: 132 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 190
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 131 (51.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
Score = 47 (21.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 198 DINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSA 257
D+N E+ + R ++Y + G +S T S S + S I+T+ +
Sbjct: 245 DLNTTEKRAAE--RHPEKYQGEAAS-GCESETSVSEDCSGLSSQSDILTTQQRDTMQHNL 301
Query: 258 GSLQNKKGDGKAQANSHGHQRKDSLTG--SDSQCL 290
LQ + + +A HG Q +S SDS L
Sbjct: 302 IKLQQEMAELEAVLEQHGSQPSNSYPSIISDSSAL 336
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/145 (31%), Positives = 64/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK ++E AE N D HC
Sbjct: 159 GKKHQIENGSGAEDNG----DSSHC 179
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
>ZFIN|ZDB-GENE-030131-4325 [details] [associations]
symbol:trim8b "tripartite motif-containing 8b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-030131-4325 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL928692 CTD:81603 HOVERGEN:HBG056254
IPI:IPI00862400 RefSeq:NP_001038379.1 UniGene:Dr.73064
ProteinModelPortal:Q1MTE4 PRIDE:Q1MTE4 GeneID:559967
KEGG:dre:559967 InParanoid:Q1MTE4 NextBio:20883228
ArrayExpress:Q1MTE4 Bgee:Q1MTE4 Uniprot:Q1MTE4
Length = 564
Score = 118 (46.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGH-YLTNNQLYPN 104
L+++++CPIC+ + E C H+FC MCI + CP C + Y L N
Sbjct: 9 LEEELICPICLNVFSEPVQLPCKHNFCRMCINEAWSKDAGMVRCPECNNAYTQKPALEKN 68
Query: 105 FLLDKLLKKTSARQISKTASPL 126
L +++K +A + KT + L
Sbjct: 69 HKLSNIVEKFNALNVEKTPAVL 90
Score = 57 (25.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 137 CGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
C + V+ D L+ ++ R ++ + L+ CL + KV LKE + L Y K
Sbjct: 181 CDIEVRRNDIRQMLIKQQDRIEDRVQDIEEQLYKLESDKCLMEDKVQHLKE-EVQLQYQK 239
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 106 (42.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCP 90
++ + K + CPIC+++IKE T C H FC C++ L K S CP
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCP 62
>UNIPROTKB|G3XAC3 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_l"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
ProteinModelPortal:G3XAC3 SMR:G3XAC3 PRIDE:G3XAC3
Ensembl:ENST00000351666 ArrayExpress:G3XAC3 Bgee:G3XAC3
Uniprot:G3XAC3
Length = 680
Score = 131 (51.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
>RGD|631346 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016235 "aggresome" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0070201 "regulation of establishment of protein localization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 129 (50.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 50/214 (23%), Positives = 88/214 (41%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQLY 102
V EL + CPIC+++ KE + CGHS+C C+ + HL ++ CP C + +
Sbjct: 7 VPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSSP 66
Query: 103 PNFLLDKLLKKTSARQISKTASPLE--NFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
PN L +++ A ++ P + R L C + I L LL Q
Sbjct: 67 PNVSLARVI---DALRLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGS-----HQ 118
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKL 220
+ + + ++ ELKE D ++E I + +R + D +S +
Sbjct: 119 HHRVTPVSTVYSRMKEELAGRLSELKEQHRD---VEEHIGKLVNNRTRIINESDVFSWVI 175
Query: 221 RM-------LGDDSNTRKSWLSSIDKNSSGIITS 247
R L D+ R L ++ ++ G++ S
Sbjct: 176 RREFQELHHLVDEEKAR--CLEGVESHTRGLVAS 207
>UNIPROTKB|Q810I1 [details] [associations]
symbol:Trim50 "E3 ubiquitin-protein ligase TRIM50"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 129 (50.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 50/214 (23%), Positives = 88/214 (41%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQLY 102
V EL + CPIC+++ KE + CGHS+C C+ + HL ++ CP C + +
Sbjct: 7 VPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSSP 66
Query: 103 PNFLLDKLLKKTSARQISKTASPLE--NFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
PN L +++ A ++ P + R L C + I L LL Q
Sbjct: 67 PNVSLARVI---DALRLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGS-----HQ 118
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKL 220
+ + + ++ ELKE D ++E I + +R + D +S +
Sbjct: 119 HHRVTPVSTVYSRMKEELAGRLSELKEQHRD---VEEHIGKLVNNRTRIINESDVFSWVI 175
Query: 221 RM-------LGDDSNTRKSWLSSIDKNSSGIITS 247
R L D+ R L ++ ++ G++ S
Sbjct: 176 RREFQELHHLVDEEKAR--CLEGVESHTRGLVAS 207
>UNIPROTKB|F1NLH3 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AADN02014962 IPI:IPI00683734
Ensembl:ENSGALT00000032038 Uniprot:F1NLH3
Length = 196
Score = 120 (47.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN + CP C LT+ Q +P ++
Sbjct: 138 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 196
>POMBASE|SPAC144.05 [details] [associations]
symbol:SPAC144.05 "ATP-dependent DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 PomBase:SPAC144.05 Prosite:PS00518
GO:GO:0005524 EMBL:CU329670 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 KO:K15710 OMA:HTWGVSG OrthoDB:EOG4Q2HPM PIR:T37672
RefSeq:NP_594666.1 ProteinModelPortal:Q9UTL9
EnsemblFungi:SPAC144.05.1 GeneID:2542902 KEGG:spo:SPAC144.05
NextBio:20803941 Uniprot:Q9UTL9
Length = 1375
Score = 134 (52.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 39/140 (27%), Positives = 62/140 (44%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT-NNQLYPN 104
V + + +C IC IIK+ F+T CGH +C C+ L++ S CP C L NN Y
Sbjct: 1083 VLKAESHQICIICRDIIKQGFITTCGHLYCSFCLEAWLKHSSSCPMCKTKLNKNNAYYIG 1142
Query: 105 FLLDKLLKKTSARQISKTASPLENFR-QALQQGCGVSVKE-IDSLMSLLSEKKRKMEQEE 162
D ++ +K LE +A +Q + +KE S + +S+ ++ E
Sbjct: 1143 ESRDIYSRQEFVTGFNKRDERLEILDDEAYRQISNMELKESFGSKIDTISKHLLYLKHNE 1202
Query: 163 AERNMQIL---LDFLHCLRK 179
+ + LD L L K
Sbjct: 1203 LYPKVVVFSQWLDVLDVLHK 1222
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/141 (27%), Positives = 62/141 (43%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKR 156
PNF L+ K+ + + + QQ S++E + ++ S +R
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNSRLQR 159
Query: 157 -KMEQEEAERNMQILLDFLHC 176
K +Q E + D HC
Sbjct: 160 GKKQQIENGSGAEDNGDSSHC 180
>UNIPROTKB|F8WFA6 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151
EMBL:AC034186 HGNC:HGNC:18278 IPI:IPI00925824
ProteinModelPortal:F8WFA6 SMR:F8WFA6 Ensembl:ENST00000421052
ArrayExpress:F8WFA6 Bgee:F8WFA6 Uniprot:F8WFA6
Length = 126
Score = 105 (42.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 52 DML-CPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D+L C IC + A + C H++C +CI L K+ CP C +T L N +LD+
Sbjct: 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDE 80
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCGVSV 141
L ++SA + S + F ++ C S+
Sbjct: 81 L--ESSAAVCFRVTSQISCFF-LFKESCCQSI 109
>DICTYBASE|DDB_G0283193 [details] [associations]
symbol:DDB_G0283193 species:44689 "Dictyostelium
discoideum" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 Pfam:PF04564 dictyBase:DDB_G0283193
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AAFI02000051 RefSeq:XP_639213.1 ProteinModelPortal:Q54RD2
EnsemblProtists:DDB0185407 GeneID:8623986 KEGG:ddi:DDB_G0283193
eggNOG:NOG272577 InParanoid:Q54RD2 OMA:TECDLEF Uniprot:Q54RD2
Length = 356
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 49 LDKDMLC-PICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
+D D+L PI M+I+ + ++ CGHSF II L+ K CP C +T N L PN+
Sbjct: 1 MDNDILLDPITMEIMSDPVISKLCGHSFSNDSIIVWLQKKETCPICNIKITTNDLTPNYS 60
Query: 107 LDKLLKKTSARQ 118
L ++K +Q
Sbjct: 61 LRDIIKHMEQQQ 72
>RGD|1310896 [details] [associations]
symbol:Trim6 "tripartite motif containing 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0070206 "protein trimerization" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1310896 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
OrthoDB:EOG4229JJ KO:K11999 CTD:117854 EMBL:AC113720
IPI:IPI00394064 RefSeq:NP_001163932.1 UniGene:Rn.80076
ProteinModelPortal:D4A3L4 Ensembl:ENSRNOT00000023043 GeneID:293294
KEGG:rno:293294 UCSC:RGD:1310896 NextBio:635769 Uniprot:D4A3L4
Length = 488
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 47/177 (26%), Positives = 77/177 (43%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCCGHYLTNNQ 100
++ ++ CPIC++++ E CGHSFC CII + N KS CP C
Sbjct: 8 DIRDEVTCPICLELLTEPLSIDCGHSFCQACIIGNSDNSVLNPEGKSSCPVCRTVYQPGS 67
Query: 101 LYPNFLLDKLLKKTSARQISKTASPLENFRQALQ-QGCGVSVKEIDSLMSLLSEKKRK-- 157
L PN L ++K+ + LE AL + + KE L+ L E+ +
Sbjct: 68 LRPNRHLAAIVKRLR-EVVLGPGKQLEVIFCALHGEKLQLFCKEDGKLICWLCERSLEHR 126
Query: 158 -----MEQEEAERNMQILLDFLHCLRK--QKVDELKEIQTDLHYIKEDINAVERHRI 207
+ +E A+ + + L LR+ Q+ ++LK + + + ERHRI
Sbjct: 127 GHHTFLMEEVAQEYQDMFQESLKKLRREQQEAEKLKALIQEKRESWKSQVEPERHRI 183
>UNIPROTKB|F1N541 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 KO:K11999
CTD:117854 EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00883463
RefSeq:NP_001192118.1 UniGene:Bt.111657 Ensembl:ENSBTAT00000015712
GeneID:514492 KEGG:bta:514492 OMA:HHKHEYR NextBio:20871361
ArrayExpress:F1N541 Uniprot:F1N541
Length = 487
Score = 101 (40.6 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCC--GHYLTN 98
++ ++ CPIC++++ E CGHSFC CI + +S CP C ++L N
Sbjct: 8 DIQDEVTCPICLELLTEPLSIDCGHSFCQACITADNKESMPGQEGQSRCPVCQTSYWLGN 67
Query: 99 NQLYPN 104
L PN
Sbjct: 68 --LRPN 71
Score = 56 (24.8 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 20/103 (19%), Positives = 43/103 (41%)
Query: 152 SEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYR 211
S KK + EQ+EAE+ ++ + + Q E IQ +++ ++ E+ ++
Sbjct: 147 SLKKLRQEQQEAEKLAAVIREKRISWKNQMEPERHRIQKQFDHLRSILDKEEQRQLKKLE 206
Query: 212 ARDRYSVKLRM-----LGDDSNTRKSWLSSIDKNSSGIITSSL 249
+R + + L S + + +S ++ G T L
Sbjct: 207 EEERRGLNIIAEAEVELVQQSQSLRELISDLEHRCQGSATELL 249
Score = 54 (24.1 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 432 SWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
S+N+F+ NR S Y+ W + EY +E+ + S+ S T P
Sbjct: 380 SFNQFANNRNVYSRYQPQSGYWVIGLHHK-HEYRAYEESSTSLLLSMTVP 428
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/116 (28%), Positives = 63/116 (54%)
Query: 380 SSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSC--LSWNKFS 437
+++ ++D+ A AG S +KV+ S+ + C + S ++W+
Sbjct: 22 NALALNKDNNQIALAGRSL-LKVY---SINSNGFTESCNMRGKNQNLSYSANDVAWSTLD 77
Query: 438 KNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SGS D
Sbjct: 78 SNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQD 133
>UNIPROTKB|C9JWC5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00657693 ProteinModelPortal:C9JWC5 SMR:C9JWC5 STRING:C9JWC5
Ensembl:ENST00000454828 UCSC:uc009yet.2 ArrayExpress:C9JWC5
Bgee:C9JWC5 Uniprot:C9JWC5
Length = 305
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>ZFIN|ZDB-GENE-070112-502 [details] [associations]
symbol:trim62 "tripartite motif containing 62"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-070112-502 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:FSGGVHY EMBL:CR848022 IPI:IPI00805914
Ensembl:ENSDART00000086296 Bgee:F1Q674 Uniprot:F1Q674
Length = 475
Score = 106 (42.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-----DCPCCGHYLTNNQL 101
S L ++LC IC+ I ++ C H FC CI H + DCP C T+ L
Sbjct: 3 SYLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEHHGTRDCPECRRTFTDPLL 62
Query: 102 YPNFLLDKLLKKTSA 116
P+ L ++++ +A
Sbjct: 63 SPSLKLSNIVERYTA 77
Score = 65 (27.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 17/89 (19%), Positives = 43/89 (48%)
Query: 117 RQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHC 176
RQ+++T S ++ R + + + L L E+++ M +E + L D H
Sbjct: 162 RQLTETKSSAKSLRATIGEA-------FERLQRFLRERQKSMLEELEADTARTLTDIEHK 214
Query: 177 LRKQKVDELKEIQTDLHYIKEDINAVERH 205
+++ +L++++ + ++E ++ RH
Sbjct: 215 IQRYS-QQLRDVKEGIQILQERLSETSRH 242
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 124 (48.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 46/145 (31%), Positives = 65/145 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L + +
Sbjct: 40 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRS 99
Query: 102 Y---PNF--LLDKLLKKTS---ARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLS 152
PNF L+ K+ A Q A N +QAL +K I ++ L
Sbjct: 100 LRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALCHSIEEGLK-IQAMNRLQR 158
Query: 153 EKKRKMEQEE-AERNMQILLDFLHC 176
KK+++E AE N D HC
Sbjct: 159 GKKQQIENGSGAEDNG----DSSHC 179
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 33/128 (25%), Positives = 59/128 (46%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 36 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 95
Query: 102 Y---PNF--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKR 156
PNF L+ K+ + + + R QQ S++E + ++ ++
Sbjct: 96 LRPDPNFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQAMHRAQRV 155
Query: 157 KMEQEEAE 164
+ Q E++
Sbjct: 156 RKHQHESD 163
>UNIPROTKB|F1NYJ6 [details] [associations]
symbol:GEMIN5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0017069 "snRNA binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0016604
GO:GO:0017069 OMA:GQNHSRI GeneTree:ENSGT00620000088064
EMBL:AADN02028674 IPI:IPI00586887 ProteinModelPortal:F1NYJ6
Ensembl:ENSGALT00000006272 Uniprot:F1NYJ6
Length = 1518
Score = 132 (51.5 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTR------SKLSCLSWNKFSKNRIAS 443
L A+ V+ I V + SV+ ++ + E P R SK++ LSW+ + R+ S
Sbjct: 592 LIASGSVNAIIYVHNLKSVIESTSESPLTITE-PFRTLAGHTSKVTSLSWSPHHEGRLVS 650
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ Y+G VWDV ++ + Y H+ R V +S + + +G+DD V
Sbjct: 651 ACYDGTAQVWDVMKEEPLCNYRGHQGRLLCVQWSPVDSDSIYTGADDFSV 700
>UNIPROTKB|E1BM69 [details] [associations]
symbol:LOC516599 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:DAAA02040907 IPI:IPI00838178
Ensembl:ENSBTAT00000006913 OMA:MANSENE Uniprot:E1BM69
Length = 497
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 51/223 (22%), Positives = 99/223 (44%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQL 101
L ++ CPIC++++ E CGHSFC +CI +T CP C + +L
Sbjct: 9 LQDEVTCPICLELLTEPLSLDCGHSFCQICITANSNESLTGQERARKCPVCRINYKSGKL 68
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFRQALQ-QGCGVSVKEIDSLMSLLSEKKRK--- 157
PN+ L ++++ R++ + E A + + +E ++ L E+ ++
Sbjct: 69 RPNWHLANIVQRV--REVKLSLEEQEKHLCAHHGEKLLLFCEEDGKVICWLCERSQEHHG 126
Query: 158 -----MEQ--EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
ME+ +E ++ +Q L+ L KQ+ E +E+++D +E+I A +
Sbjct: 127 HPTFLMEEVAQEYQKKLQAALERL----KQEQQEAEELESDF---REEIAAWKNQT---Q 176
Query: 211 RARDRYSVKLRMLGD--DSNTRKSWLSSIDKNSSGIITSSLNA 251
R + + L + DS RK L + + I+ + N+
Sbjct: 177 HERQNVQAEFKKLREILDSEERKE-LQKLKAEETAILCTMANS 218
>UNIPROTKB|Q8IYM9 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0009615 "response to virus"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0003714 GO:GO:0019048
GO:GO:0006955 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0016567
GO:GO:0051607 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0015030 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 EMBL:X82200
EMBL:BC022281 EMBL:BC035582 IPI:IPI00477398 IPI:IPI00477812
PIR:A57041 RefSeq:NP_001186502.1 RefSeq:NP_006065.2
UniGene:Hs.501778 UniGene:Hs.684559 UniGene:Hs.733231
ProteinModelPortal:Q8IYM9 SMR:Q8IYM9 IntAct:Q8IYM9
MINT:MINT-2868217 STRING:Q8IYM9 PhosphoSite:Q8IYM9 DMDM:47606181
PaxDb:Q8IYM9 PRIDE:Q8IYM9 DNASU:10346 Ensembl:ENST00000379965
GeneID:10346 KEGG:hsa:10346 UCSC:uc001mbr.3 UCSC:uc009yes.3
CTD:10346 GeneCards:GC11P005667 HGNC:HGNC:16379 HPA:HPA003307
HPA:HPA003575 MIM:606559 neXtProt:NX_Q8IYM9 PharmGKB:PA38129
eggNOG:NOG258942 InParanoid:Q8IYM9 OMA:HQTFRIN ChiTaRS:TRIM22
GenomeRNAi:10346 NextBio:39235 ArrayExpress:Q8IYM9 Bgee:Q8IYM9
CleanEx:HS_TRIM22 Genevestigator:Q8IYM9 GermOnline:ENSG00000132274
Uniprot:Q8IYM9
Length = 498
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 42/210 (20%), Positives = 93/210 (44%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
L PN L ++++ ++S + + + + KE ++ + E ++ +
Sbjct: 68 LRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCELSQEHQG 127
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV-- 218
+ R +++ + L+ +KE Q + +++DI ER Y +R +
Sbjct: 128 HQTFRINEVVKECQEKLQVALQRLIKEDQ-EAEKLEDDIRQ-ERTAWKNYIQIERQKILK 185
Query: 219 ---KLRMLGDDSNTRKSWLSSIDKNSSGII 245
++R++ D+ R+ L +++ ++
Sbjct: 186 GFNEMRVILDNEEQRE--LQKLEEGEVNVL 213
>ZFIN|ZDB-GENE-040801-199 [details] [associations]
symbol:trim35-36 "tripartite motif containing
35-36" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040801-199 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:CU137686 EMBL:BC077164 IPI:IPI00511023 RefSeq:NP_001003462.1
UniGene:Dr.73072 Ensembl:ENSDART00000031534 GeneID:445068
KEGG:dre:445068 CTD:445068 InParanoid:Q6DEF5 OMA:WIVELKE
NextBio:20831830 Uniprot:Q6DEF5
Length = 450
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 46/171 (26%), Positives = 74/171 (43%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS--DCPCCGHYLTNNQLYPN 104
S + D+ CP+C I K + +C HSFC C+ RNK+ +CP C + ++ N
Sbjct: 3 SSAEYDLTCPVCQDIFKTPVILSCSHSFCKECLQQFWRNKNTQECPVCRRRSSKDRPLVN 62
Query: 105 FLLDKL----LKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKME- 159
L L LK+ + R+ S + + L+ C + K+ L+ SEK K
Sbjct: 63 LALQNLCESFLKERNERRSSGSEEICSLHSEKLKLFC-LEDKQPVCLVCRDSEKHLKHTF 121
Query: 160 ---QEEAERNMQILLDFLHCLRK--QKVDELK-EIQTDLHYIKEDINAVER 204
E A + L L L++ + +E+K E + +IK ER
Sbjct: 122 RPVSEVAPAKKEELNTALKSLQEKCELNEEMKREFEKTAQHIKAQAEHTER 172
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 33/128 (25%), Positives = 59/128 (46%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQL 101
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 37 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 96
Query: 102 Y---PNF--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKR 156
PNF L+ K+ + + + R QQ S++E + ++ ++
Sbjct: 97 LRPDPNFDALISKIYPSRDEYEAHQDRVLAKLNRLHNQQALSSSIEEGLKMQAMHRAQRV 156
Query: 157 KMEQEEAE 164
+ Q E++
Sbjct: 157 RKHQHESD 164
>ZFIN|ZDB-GENE-071004-19 [details] [associations]
symbol:trim35-28 "tripartite motif containing 35-28"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-071004-19 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX571761 IPI:IPI00493500 Ensembl:ENSDART00000041787
OMA:LINISMH Bgee:F1QJY4 Uniprot:F1QJY4
Length = 477
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 61/263 (23%), Positives = 105/263 (39%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN--KSDCPCCGHYLTNNQLYPNFL 106
L+ D+ CP+C I KE L +C HSFC +C+ +N K CP C PN
Sbjct: 16 LETDLTCPVCKDIFKEPELLSCSHSFCKVCLEGSWKNQTKRQCPMCRKCCDGETPIPNRA 75
Query: 107 LDKLL---KKTSARQISKTASPLEN---FRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
L KK R+ + T S E ++ Q C +K+ + + E
Sbjct: 76 LHNACVSYKKERNRRGATTGSEEELCGLHQRPFQLFC---IKDEEPVCVECVTLHPGHEL 132
Query: 161 EEAERNMQILLDFLHC---LRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY-RARDRY 216
E+ + D L + + K+D K ++ Y KE I +E + + + +
Sbjct: 133 VPTEQGVPFCKDELTMKIKILEGKLDSFKRMKK--RY-KETITFIEGQTKEAENQIKQEF 189
Query: 217 SVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGS---LQNKKGDGKAQ--- 270
++L ++ +R LS + ++T + A G G +Q+ K + A+
Sbjct: 190 ERLHQVLNEEEKSRLLALSREEDEKKQVVTEKIEAIGRDITGLAELIQSVKREMGAEDLT 249
Query: 271 --ANSHGHQRKDSLTGSDSQCLN 291
N +R+ TG D + +N
Sbjct: 250 FLLNFQKLKRRTQWTGDDPRRVN 272
>MGI|MGI:2155959 [details] [associations]
symbol:Lnx2 "ligand of numb-protein X 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 MGI:MGI:2155959 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030165 SUPFAM:SSF50156 InterPro:IPR017907
GeneTree:ENSGT00650000092901 eggNOG:NOG236845 HOGENOM:HOG000261605
HOVERGEN:HBG039539 KO:K10692 CTD:222484 OMA:EKDFCPL
OrthoDB:EOG4ZW59N ChiTaRS:LNX2 EMBL:AF401681 EMBL:AK036218
EMBL:AL513345 EMBL:CH466614 IPI:IPI00314565 RefSeq:NP_542985.4
UniGene:Mm.272203 ProteinModelPortal:Q91XL2 SMR:Q91XL2
STRING:Q91XL2 PhosphoSite:Q91XL2 PRIDE:Q91XL2
Ensembl:ENSMUST00000016664 GeneID:140887 KEGG:mmu:140887
InParanoid:A6PW04 NextBio:370025 Bgee:Q91XL2 CleanEx:MM_LNX2
Genevestigator:Q91XL2 GermOnline:ENSMUSG00000016520 Uniprot:Q91XL2
Length = 687
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG---HY--LTNNQLY 102
E+D D++C IC+Q + + T CGH+FC+ C+ L+ K CP H+ + +
Sbjct: 44 EVDDDLVCHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDFCPLDRKRLHFKLCKKSSIL 103
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQE 161
+ LLDKLL + + + L+ C G S + +D S+ + ++E E
Sbjct: 104 VHKLLDKLLVLCPFSPVCQDVMQRCDLEAHLKNRCPGASHRRVDLERRKTSQTQTQIEGE 163
>MGI|MGI:2137352 [details] [associations]
symbol:Trim6 "tripartite motif-containing 6" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070206 "protein
trimerization" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2137352
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 CTD:117854
EMBL:AK033396 EMBL:AK049238 EMBL:BC138965 EMBL:AF220031
IPI:IPI00407811 RefSeq:NP_001013637.1 UniGene:Mm.274843
ProteinModelPortal:Q8BGE7 SMR:Q8BGE7 PhosphoSite:Q8BGE7
PRIDE:Q8BGE7 Ensembl:ENSMUST00000098180 GeneID:94088 KEGG:mmu:94088
UCSC:uc009ivq.1 eggNOG:NOG238217 InParanoid:B2RSQ8 OMA:KSQMEPE
NextBio:352065 Bgee:Q8BGE7 CleanEx:MM_TRIM6 Genevestigator:Q8BGE7
Uniprot:Q8BGE7
Length = 488
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 42/159 (26%), Positives = 75/159 (47%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCCGHYLTNNQ 100
++ ++ CPIC++++ E CGHSFC +CII + N +S CP C
Sbjct: 8 DIRDEVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCRTSYQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQISKT-ASPLENFRQALQ-QGCGVSVKEIDSLMSLLSEKKRK- 157
L PN L ++K+ R+++ LE AL + + KE L+ L E+ ++
Sbjct: 68 LRPNRHLAAIVKRL--REVALCPGKQLEVIFCALHGEKLQLFCKEDGKLICWLCERSQEH 125
Query: 158 ------MEQEEAERNMQILLDFLHCLRK--QKVDELKEI 188
+ +E A+ + + L LR+ Q+ ++LK +
Sbjct: 126 RGHHTFLMEEVAQEYQDMFQESLKKLRREQQEAEKLKAL 164
>UNIPROTKB|F8W8H7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930098 ProteinModelPortal:F8W8H7 SMR:F8W8H7
PRIDE:F8W8H7 Ensembl:ENST00000354071 ArrayExpress:F8W8H7
Bgee:F8W8H7 Uniprot:F8W8H7
Length = 1598
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
>RGD|1308222 [details] [associations]
symbol:Lnx2 "ligand of numb-protein X 2" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA;ISO] [GO:0051260
"protein homooligomerization" evidence=IEA;ISO] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 RGD:1308222
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 OrthoDB:EOG4ZW59N
IPI:IPI00765318 ProteinModelPortal:D3ZRH6
Ensembl:ENSRNOT00000001263 UCSC:RGD:1308222 Uniprot:D3ZRH6
Length = 588
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG---HY--LTNNQLY 102
E+D D++C IC+Q + + T CGH+FC+ C+ L+ K CP H+ + +
Sbjct: 44 EVDDDLVCHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDFCPLDRKRLHFKLCKKSSIL 103
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQE 161
+ LLDKLL + + + L+ C G S + +D S+ ++E E
Sbjct: 104 VHKLLDKLLVLCPFSSVCQDVMQRCDLEAHLKNRCLGASHRRVDLERRKTSQAHTQIEGE 163
>UNIPROTKB|F8W6N8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI01012489 ProteinModelPortal:F8W6N8 SMR:F8W6N8
Ensembl:ENST00000396853 ArrayExpress:F8W6N8 Bgee:F8W6N8
Uniprot:F8W6N8
Length = 327
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE R Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAREYQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|F1RWB4 [details] [associations]
symbol:LOC100737099 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000009702 OMA:KISGHES Uniprot:F1RWB4
Length = 440
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 43/179 (24%), Positives = 75/179 (41%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
+++L + CPIC+ +++ T CGH+FC+ C++ L+ CP C + + L
Sbjct: 4 LAQLQAEASCPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPDRSLR 63
Query: 103 PN----FLLD--KLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
N ++D K L T + PL E Q L C ++ + + + +
Sbjct: 64 RNTQLCHMVDVVKQLPNTEGEGKQQEEKPLCEKHHQVLSLFCEEDLELLCPQCQVSCDHQ 123
Query: 156 RK----MEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
MEQ A ++ H L KQ + K ++ + E + VE R DL+
Sbjct: 124 DHHLVPMEQAAACHRKRLKGSIEH-LTKQFKEANKALEMQVSKSFELVRKVENQRRDLH 181
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
L+ ++ C IC + EA C HSFC CI ++ K +CP C
Sbjct: 47 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPIC 90
>UNIPROTKB|K7GNS2 [details] [associations]
symbol:K7GNS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000034844 Uniprot:K7GNS2
Length = 250
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 41/168 (24%), Positives = 75/168 (44%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
+++L + CPIC+ +++ T CGH+FC+ CI+ L+ CP C + + L
Sbjct: 7 LAQLQAEASCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPDRSLR 66
Query: 103 PNF----LLD--KLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
N ++D K L T ++ + PL E Q L C E D + LL +
Sbjct: 67 RNTQLCRMVDVVKQLPNTRRKRKRQEEKPLCEKHHQVLSLFC-----EED--LELLCPQC 119
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
R + + + + + C RK+ D ++ + +++E A+E
Sbjct: 120 R-VSSDHCDHPLVPMEQAAACHRKRLKDSIERLTK---HLEEAYKALE 163
>UNIPROTKB|F1RSW8 [details] [associations]
symbol:LNX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 OMA:EKDFCPL
EMBL:CU606917 Ensembl:ENSSSCT00000010196 Uniprot:F1RSW8
Length = 692
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG---HY--LTNNQLY 102
E+D D++C IC+Q + + T CGH+FC C+ L+ K CP H+ + +
Sbjct: 44 EVDDDLVCHICLQPLLQPLDTPCGHTFCCKCLRNFLQEKDFCPLDRKRLHFKLCKKSSIL 103
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQE 161
+ LLDKLL + + + L+ C G S++ + L +KR Q
Sbjct: 104 VHKLLDKLLVLCPFSSVCQDVMQRCDLEAHLKNRCPGASLRR-----AALERRKRSKAQS 158
Query: 162 EAE 164
E E
Sbjct: 159 EVE 161
>FB|FBgn0028847 [details] [associations]
symbol:CG9014 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014134 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 Gene3D:3.90.890.10
HSSP:P15919 GeneTree:ENSGT00530000063647 KO:K11981 EMBL:BT003232
RefSeq:NP_609668.2 UniGene:Dm.12062 SMR:Q9VJW5 IntAct:Q9VJW5
MINT:MINT-313528 STRING:Q9VJW5 EnsemblMetazoa:FBtr0080579
GeneID:34777 KEGG:dme:Dmel_CG9014 UCSC:CG9014-RA
FlyBase:FBgn0028847 eggNOG:NOG250957 InParanoid:Q9VJW5 OMA:HVDEELI
OrthoDB:EOG49CNQ9 GenomeRNAi:34777 NextBio:790166 Uniprot:Q9VJW5
Length = 328
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 42/175 (24%), Positives = 84/175 (48%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPC------CGHYLTN 98
V +D++++CPIC +++E ++ C H+FC CI + K CP H +
Sbjct: 9 VGHVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQICPVDRSGLLTSHLVPV 68
Query: 99 NQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKM 158
++L N L +K T ++ LE FR + C + K + + K+
Sbjct: 69 SRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVA-ACEHNPKVV---VECSKGCGMKV 124
Query: 159 EQEEAERNMQI--LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYR 211
++E R+ + L + + L K+ V +LK+ Q+D+ E+ ++ +R ++L++
Sbjct: 125 PKDEMSRHNCVFELRELVEKLAKE-VSDLKQKQSDM----EEQSSSQRREMELFQ 174
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 8 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 67
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 68 LRPDPNFDALISK 80
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 8 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 67
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 68 LRPDPNFDALISK 80
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 8 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 67
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 68 LRPDPNFDALISK 80
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 8 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 67
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 68 LRPDPNFDALISK 80
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 12 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 71
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 72 LRPDPNFDALISK 84
>ZFIN|ZDB-GENE-081030-14 [details] [associations]
symbol:trim35-37 "tripartite motif containing 35-37"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081030-14
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 EMBL:CU137686 IPI:IPI00512555
Ensembl:ENSDART00000140241 Uniprot:E9QHI9
Length = 409
Score = 125 (49.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 47/172 (27%), Positives = 76/172 (44%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS--DCPCCGHYLTNNQLYPN 104
S + D +CP+C +I K L +C HSFC C+ RNK+ +CP C + + N
Sbjct: 3 SSAEYDYICPVCQEIFKTPVLLSCSHSFCKECLQQFWRNKNTQECPVCRRRSSKSAPPVN 62
Query: 105 FLL----DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKME- 159
L + LK+ + + S + + L+ C + K+ L+ SEK K
Sbjct: 63 LGLKNVCESFLKERNESRSSGSEEICSLHSEKLKLFC-LEDKQPVCLVCRDSEKHLKHTF 121
Query: 160 ---QEEAERNMQILLDFLHCLRKQ-KV-DELK-EIQTDLHYIKEDINAVERH 205
E A + L L L+++ K+ +E+K E + +IK ERH
Sbjct: 122 RPVSEVAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQHIKAQAEHTERH 173
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAEL 367
R+GY +DF SV ++R+ RV +L
Sbjct: 366 RKGYVFFKSDFWSVCYGWSRWFGFRVDQDL 395
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 37 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 96
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 97 LRPDPNFDALISK 109
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 37 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 96
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 97 LRPDPNFDALISK 109
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 37 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 96
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 97 LRPDPNFDALISK 109
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 37 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 96
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 97 LRPDPNFDALISK 109
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQ- 100
V L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L + +
Sbjct: 37 VSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS 96
Query: 101 LYPNFLLDKLLKK 113
L P+ D L+ K
Sbjct: 97 LRPDPNFDALISK 109
>UNIPROTKB|E1C2T9 [details] [associations]
symbol:LNX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 KO:K10692
CTD:222484 OMA:EKDFCPL EMBL:AADN02005182 IPI:IPI00590150
RefSeq:XP_417122.2 ProteinModelPortal:E1C2T9
Ensembl:ENSGALT00000027616 GeneID:418928 KEGG:gga:418928
NextBio:20822052 Uniprot:E1C2T9
Length = 692
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG---HY--LTNNQL 101
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP H+ + +
Sbjct: 40 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSI 99
Query: 102 YPNFLLDKLL 111
+ LLDKLL
Sbjct: 100 LVHKLLDKLL 109
>RGD|1305795 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10116
"Rattus norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 RGD:1305795 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0019005
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 GeneTree:ENSGT00690000101646
OrthoDB:EOG4KWJSP IPI:IPI00359044 Ensembl:ENSRNOT00000024992
UCSC:RGD:1305795 Uniprot:D4ACF2
Length = 474
Score = 106 (42.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 46/179 (25%), Positives = 79/179 (44%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCG-HYLTNNQL 101
+ + ++ +++ C IC++ + E CGH FC CI N CP C H+L N L
Sbjct: 9 MSLEKMWEEVTCSICLEPMVEPMSIECGHCFCKECISEVGGNGGGSCPVCRQHFLLRN-L 67
Query: 102 YPNFLLDKLLK--KTSARQISKTASPLENFR--QALQQGCGVSVKEIDSLMSLLSEKKRK 157
PN + +++ K A+ K + + + L C + + + S K R
Sbjct: 68 RPNRHIANMVENLKQEAQNTKKGTQEVHCMKHGEILHLFCEEDGQAL-CWVCAQSGKHRD 126
Query: 158 MEQEEAERNMQILLDFLH-CLRK-QKVDELKE-IQTDLHYIKEDINAVERHRIDLYRAR 213
+ E +I + +H L K +K EL E ++ DL + D A R+ ID ++R
Sbjct: 127 HTKVPIEEAAKIYQEKIHKALEKLRKGKELAEKLEMDLAMQRTDWKARTRN-IDTQKSR 184
Score = 61 (26.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 38/189 (20%), Positives = 79/189 (41%)
Query: 299 RKKRVHAQFNDLQECYLQK-RRQMANQPHTKQESDKNIIHREGY----NAGLADFQSVLT 353
+K R+H +F Q+ +RQ+ ++E + + +E N L + S L
Sbjct: 181 QKSRIHEEFAHQNSLLAQEEQRQLQRLEKDEREHLRLLGEKEAELAEKNQALQELISELE 240
Query: 354 TFTRYSRLRVIAELRHGDIFHSANI-VSSIEFDRDDQLFATAGVSRRIKVFDFASV-VNE 411
+R S L ++ E+R + S + + +++ D D L +T V R K+ V +
Sbjct: 241 RRSRGSELELLKEVRIV-LERSVSWKLDTVDVDSPD-LTSTCHVPGRKKMLRTCWVHITL 298
Query: 412 PADV--HCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEK 469
D C ++ R ++ S+N ++Y ++ ++ + E + +K
Sbjct: 299 DRDTANSCLIISKDRRQVRMGDTYQNVSENAERFNNYPMVLGAQRFSSGKMYWEVDVTQK 358
Query: 470 RAWSVDFSR 478
+AW + R
Sbjct: 359 QAWDLGVCR 367
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 26/65 (40%), Positives = 33/65 (50%)
Query: 46 VSELDKDML--CPICMQII--KEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQL 101
+ E K+ L CPICM + +E T CGH FC CI T +R CP C LT Q
Sbjct: 255 IDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNKKLTARQF 314
Query: 102 YPNFL 106
+ +L
Sbjct: 315 FRIYL 319
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGH----YLTNNQLYPNFLL 107
D CP+C+++ E T CGH+FC CI L + CP C Y N + P LL
Sbjct: 312 DFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKNRKYNPTVLL 371
Query: 108 DKLLKKTSARQISK 121
+++ + +Q+++
Sbjct: 372 QEIMSRLFPQQLAE 385
>MGI|MGI:1890476 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=IDA] [GO:0001741 "XY body"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005657 "replication fork" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0045910
"negative regulation of DNA recombination" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 MGI:MGI:1890476 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 GO:GO:0016567 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031593 InterPro:IPR017907 GO:GO:0001741
GO:GO:0045910 eggNOG:COG5432 KO:K10627 CTD:56852
HOGENOM:HOG000234845 HOVERGEN:HBG054721 EMBL:AF205278 EMBL:AK012795
IPI:IPI00470179 RefSeq:NP_067360.2 UniGene:Mm.103812
ProteinModelPortal:Q9QXK2 SMR:Q9QXK2 STRING:Q9QXK2
PhosphoSite:Q9QXK2 PRIDE:Q9QXK2 Ensembl:ENSMUST00000077088
GeneID:58186 KEGG:mmu:58186 UCSC:uc009dec.2
GeneTree:ENSGT00390000011230 NextBio:314151 Bgee:Q9QXK2
CleanEx:MM_RAD18 Genevestigator:Q9QXK2
GermOnline:ENSMUSG00000030254 Uniprot:Q9QXK2
Length = 509
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 40/153 (26%), Positives = 66/153 (43%)
Query: 52 DML-CPICMQIIKEA-FLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D+L C IC + A + C H++C +CI L K+ CP C +T L N LLD+
Sbjct: 21 DLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTEPDLRNNRLLDE 80
Query: 110 LLK-----KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
L+K +T Q + + P+ ++ V V D+ + + R M++
Sbjct: 81 LVKSMNFARTHLLQFALESPPISPVSSTSKKVV-VKVHNADAAQHPVKQANRLMDKFLIR 139
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKE 197
+ + L ++K KE+ T IKE
Sbjct: 140 ETGDCVFELLGKENERKFSPQKELSTSAE-IKE 171
>DICTYBASE|DDB_G0278935 [details] [associations]
symbol:rad18 "C3HC4-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00513
dictyBase:DDB_G0278935 Prosite:PS00518 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 EMBL:AAFI02000024
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0008094 KO:K10695 RefSeq:XP_641970.2
ProteinModelPortal:Q54XR0 EnsemblProtists:DDB0304878 GeneID:8621702
KEGG:ddi:DDB_G0278935 eggNOG:NOG328594 InParanoid:Q54XR0
OMA:IHANECL Uniprot:Q54XR0
Length = 668
Score = 129 (50.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/117 (25%), Positives = 58/117 (49%)
Query: 55 CPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLK- 112
CPIC A + C H++C CI L K CP C QL N LD +++
Sbjct: 19 CPICYDFFNTAMMIPKCSHNYCSFCIRQSLSFKEFCPSCRISCNATQLVNNRQLDLIVQN 78
Query: 113 -KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQ 168
K+ ++ISK L+N + +Q + +K +++ + +++++ +Q++ ++ Q
Sbjct: 79 YKSLIKEISKQKQSLQNQQNQIQDQILLHLK-LENQFNQQQQQQQQQQQQQQQQQQQ 134
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/117 (12%), Positives = 47/117 (40%)
Query: 217 SVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH 276
++ R +SN + ++ + N++ ++ N ++ + N + N++ +
Sbjct: 253 AIVTRSRSRNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 312
Query: 277 QRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF--NDLQECYLQKRRQMANQPHTKQES 331
++ +++ N S + + + + + ND+ Q + ++ TK S
Sbjct: 313 NNNNNNNNNNNNNTNASNIEIQNTFNITSSYSENDITPTSTQSPPKSSSFSSTKSPS 369
>RGD|1306993 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001741 "XY body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 RGD:1306993
Prosite:PS00518 GO:GO:0005634 GO:GO:0009411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 IPI:IPI00951538 Ensembl:ENSRNOT00000008214
UCSC:RGD:1306993 ArrayExpress:F1LYK9 Uniprot:F1LYK9
Length = 528
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 42/153 (27%), Positives = 68/153 (44%)
Query: 52 DML-CPICMQIIKEA-FLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D+L C IC + A + C H++C +CI L K+ CP C +T L N LLD+
Sbjct: 19 DLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTEPDLRNNRLLDE 78
Query: 110 LLKKTS-AR----QISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
L+K S AR Q + + P+ ++ V V +++ + + R M++
Sbjct: 79 LVKSMSFARTRLLQFALESPPISPVSSTSKKVV-VKVHNVEATQHPVKQGNRLMDKFLIR 137
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKE 197
+ + L ++K KEI T IKE
Sbjct: 138 ETGDCVSELLGKENERKFSPQKEISTSAD-IKE 169
>DICTYBASE|DDB_G0270014 [details] [associations]
symbol:DDB_G0270014 species:44689 "Dictyostelium
discoideum" [GO:2001070 "starch binding" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002044 InterPro:IPR013784
Pfam:PF00686 PROSITE:PS50089 PROSITE:PS51166 SMART:SM00184
SMART:SM01065 dictyBase:DDB_G0270014 Prosite:PS00518
EMBL:AAFI02000005 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49452 GO:GO:2001070 eggNOG:NOG254243
RefSeq:XP_646470.1 ProteinModelPortal:Q55CL1
EnsemblProtists:DDB0190739 GeneID:8617431 KEGG:ddi:DDB_G0270014
InParanoid:Q55CL1 OMA:EYKYCIS Uniprot:Q55CL1
Length = 206
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
V + +CPI +I++ +T CGH+FC C+I L+++ CP +T+ QL N+
Sbjct: 9 VDRISPHFICPIGGGVIEDPVVTPCGHTFCNPCLIKWLQSRRQCPTDRLPVTDKQLIQNW 68
Query: 106 LL 107
L+
Sbjct: 69 LV 70
>UNIPROTKB|E1BGL7 [details] [associations]
symbol:TRIM40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
OMA:HYKERLN EMBL:DAAA02055413 IPI:IPI00906997
Ensembl:ENSBTAT00000009916 Uniprot:E1BGL7
Length = 245
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 46/165 (27%), Positives = 68/165 (41%)
Query: 54 LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-----DCPCCGHYLTNNQLYPNFLLD 108
+CPIC + +KEA T CGH FC C+ HL S CP C + L + D
Sbjct: 13 ICPICQECLKEAVRTDCGHLFCRACLAQHLEKASASGVRSCPLCRKPCSEGVLGAGYTCD 72
Query: 109 KLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQ 168
KK A E R+ L C V+ E S L E +E E ++
Sbjct: 73 SPQKK--AYWFC------EESRRLLCMECRVT-PEHKSHCELPIENAISHYKERLEGRIK 123
Query: 169 ILLDFLHCLRKQKVDE--LKEIQTD--LHYIKEDINAVERHRIDL 209
L + R+ ++ E L+E+Q D H ++ ++ + R L
Sbjct: 124 RLNRRIRRRRQLRIQEEILQEMQADHGTHRLEAELEQQPQTRRQL 168
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 99 (39.9 bits), Expect = 0.00024, P = 0.00024
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 99 (39.9 bits), Expect = 0.00024, P = 0.00024
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCC 92
L ++ CPIC++ +K+ CGH+FC C+ ++ D CP C
Sbjct: 10 LQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVC 56
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 99 (39.9 bits), Expect = 0.00024, P = 0.00024
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQL 101
CPICM +I++ L T CGH FC C+ L+N + CP C + + +L
Sbjct: 48 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRL 101
>UNIPROTKB|E2QUP0 [details] [associations]
symbol:TRIML1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
OMA:ELTLCHI EMBL:AAEX03010485 Ensembl:ENSCAFT00000011588
Uniprot:E2QUP0
Length = 470
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS---DCPCCGHYLTNNQLY 102
+ L +++ C IC+ T CGHSFC +C++ + CP C L +
Sbjct: 13 MENLREELTCFICLDYFTSPVTTECGHSFCLLCLLRSWEEHNTPLSCPECWRTLESPHFQ 72
Query: 103 PNFLLDKL--LKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSE----KKR 156
PN L +L + K Q+ ++ L+ + L G VS + + + S+ +
Sbjct: 73 PNERLGRLAGIGKQLRSQVLQSEGELDASGRMLA-GTKVSSDDEQGVNAFSSQCHGINRL 131
Query: 157 KMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDI 199
E ER+ + L + L+ L K++ KE Q L + KE +
Sbjct: 132 HPSSEAEERHKEKLKEILNLLHKKR----KETQVILTHEKERV 170
>UNIPROTKB|F1NGM4 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR006574
SMART:SM00589 GeneTree:ENSGT00680000099496 EMBL:AADN02018387
EMBL:AADN02018388 IPI:IPI00588433 Ensembl:ENSGALT00000026786
OMA:HEEANLF Uniprot:F1NGM4
Length = 477
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 47/209 (22%), Positives = 88/209 (42%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYPNFLLDK 109
+++LCPIC + +EA CGH+FC CI ++ CP C + + L N L+
Sbjct: 9 EELLCPICYEPFREAVTLCCGHNFCKGCISRSWEHRQHTCPVCKETSSFDDLRINHTLNN 68
Query: 110 LLK---KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERN 166
L++ + R++ + A+ + C + KE L + ++ E +
Sbjct: 69 LVEMILREEGRRLGRPAALCPLHHEEANLFC-LDDKE---LACFACQGSKQHEGHKMRPV 124
Query: 167 MQILLDFLHCLRKQKV---DELKEIQTDLHYIKEDI---NAVERHRIDLYRARDRYSVKL 220
+ +DF L+ + D++K+ +H E I N VE R++ R+ +
Sbjct: 125 QETAMDFRAKLKNMETSLQDKVKDFGA-VHRSYESISKHNKVEAKRLEEQIKRE-FEKLH 182
Query: 221 RMLGDDSNTRKSWLSSIDKNSSGIITSSL 249
L D+ S L ++ +I S +
Sbjct: 183 EFLRDEEKALLSQLQEEKQHKHSLIESKM 211
>MGI|MGI:2664992 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016235 "aggresome" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070201 "regulation of establishment of protein localization"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2664992
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 EMBL:AY081947
IPI:IPI00408393 RefSeq:NP_839971.1 UniGene:Mm.261834
ProteinModelPortal:Q810I2 SMR:Q810I2 STRING:Q810I2
PhosphoSite:Q810I2 PRIDE:Q810I2 Ensembl:ENSMUST00000065785
GeneID:215061 KEGG:mmu:215061 UCSC:uc008zyf.1 NextBio:374596
CleanEx:MM_TRIM50 Genevestigator:Q810I2 Uniprot:Q810I2
Length = 483
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQLY 102
V EL + CPIC+++ KE + CGHS+C C+ HL ++ CP C + +
Sbjct: 7 VPELQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSSSP 66
Query: 103 PNFLLDKLL 111
PN L +++
Sbjct: 67 PNVSLARVI 75
>UNIPROTKB|A6NLP3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005794 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691
EMBL:AC025016 EMBL:AC131574 HOVERGEN:HBG001357 HOGENOM:HOG000234134
HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341 IPI:IPI00394971
ProteinModelPortal:A6NLP3 SMR:A6NLP3 IntAct:A6NLP3 STRING:A6NLP3
PRIDE:A6NLP3 Ensembl:ENST00000305836 ArrayExpress:A6NLP3
Bgee:A6NLP3 Uniprot:A6NLP3
Length = 493
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE R Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAREYQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|Q9C035 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0008329
"pattern recognition receptor activity" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IDA]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0019048 EMBL:CH471064
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
EMBL:AC015691 HOVERGEN:HBG001357 OrthoDB:EOG4229JJ GO:GO:0031664
EMBL:AF220025 EMBL:AF220026 EMBL:AF220027 EMBL:AF220028
EMBL:AF220029 EMBL:AY625000 EMBL:DQ301444 EMBL:DQ301445
EMBL:DQ301446 EMBL:DQ301447 EMBL:DQ301448 EMBL:DQ301449
EMBL:DQ301450 EMBL:DQ301451 EMBL:DQ301452 EMBL:DQ301453
EMBL:DQ301454 EMBL:DQ301455 EMBL:DQ301456 EMBL:DQ301457
EMBL:DQ301458 EMBL:DQ301459 EMBL:DQ301460 EMBL:DQ301461
EMBL:DQ301462 EMBL:DQ301463 EMBL:DQ301464 EMBL:DQ301465
EMBL:DQ301466 EMBL:DQ301467 EMBL:DQ301468 EMBL:DQ301469
EMBL:DQ301470 EMBL:DQ301471 EMBL:DQ301472 EMBL:DQ301473
EMBL:DQ301474 EMBL:DQ301475 EMBL:DQ301476 EMBL:DQ301477
EMBL:DQ301478 EMBL:DQ301479 EMBL:DQ301480 EMBL:DQ288685
EMBL:JF928461 EMBL:JF928462 EMBL:AK027593 EMBL:EU260465
EMBL:BC021258 IPI:IPI00394972 IPI:IPI00394973 IPI:IPI00394974
IPI:IPI00394975 IPI:IPI00873422 RefSeq:NP_149023.2
RefSeq:NP_149083.2 RefSeq:NP_149084.2 UniGene:Hs.125300 PDB:2ECV
PDB:2YRG PDBsum:2ECV PDBsum:2YRG ProteinModelPortal:Q9C035
SMR:Q9C035 IntAct:Q9C035 STRING:Q9C035 PhosphoSite:Q9C035
DMDM:38605459 PaxDb:Q9C035 PRIDE:Q9C035 DNASU:85363
Ensembl:ENST00000380027 Ensembl:ENST00000380034
Ensembl:ENST00000396847 Ensembl:ENST00000396855
Ensembl:ENST00000433961 GeneID:85363 KEGG:hsa:85363 UCSC:uc001mbm.2
UCSC:uc001mbn.3 UCSC:uc001mbp.3 CTD:85363 GeneCards:GC11M005641
H-InvDB:HIX0009393 HGNC:HGNC:16276 HPA:CAB013497 HPA:HPA023420
HPA:HPA023422 MIM:608487 neXtProt:NX_Q9C035 PharmGKB:PA38109
eggNOG:NOG253216 KO:K10648 OMA:WILGVCA ChiTaRS:TRIM5
EvolutionaryTrace:Q9C035 GenomeRNAi:85363 NextBio:75883
ArrayExpress:Q9C035 Bgee:Q9C035 Genevestigator:Q9C035
GermOnline:ENSG00000132256 Uniprot:Q9C035
Length = 493
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE R Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAREYQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|Q1ACD8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9597 "Pan paniscus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229282 ProteinModelPortal:Q1ACD8 SMR:Q1ACD8
Uniprot:Q1ACD8
Length = 493
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE R Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAREYQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|Q5D7J1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9598 "Pan troglodytes" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 HSSP:Q14134 GO:GO:0031664 CTD:85363
eggNOG:NOG253216 KO:K10648 EMBL:AH014830 EMBL:AY740617
EMBL:AY843506 EMBL:DQ298177 EMBL:AY923177 EMBL:DQ437595
RefSeq:NP_001012668.1 UniGene:Ptr.6259 ProteinModelPortal:Q5D7J1
SMR:Q5D7J1 STRING:Q5D7J1 GeneID:503563 KEGG:ptr:503563
NextBio:20866205 Uniprot:Q5D7J1
Length = 493
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCAHHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE R Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAREYQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|I3LPZ1 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070206 "protein trimerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00690000101646 OMA:WAICWSS
EMBL:FP102554 Ensembl:ENSSSCT00000024949 Uniprot:I3LPZ1
Length = 502
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHYLTNNQLYPN 104
+L +++ C IC+ ++ CGH+FC C+ L N+ CP C T + L PN
Sbjct: 5 DLQEELSCSICLDYFEDPVSIECGHNFCRDCLRRGLAQGCNQFPCPECRRPSTPSALRPN 64
Query: 105 FLLDKLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEA 163
+ L +L +K R+ + L + + L+ C ++ LM ++ + QE
Sbjct: 65 WALARLAQKARRRREGPASRGLCDRHGEPLRLFC----EDDQRLMCMVCRES----QEHQ 116
Query: 164 ERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKL 220
M + + R+ +L ++ D YI E + A + + L A+ + KL
Sbjct: 117 AHTMAPMDEAFQSYRRLIQKDLGMMEQDNSYILELLRAFKNWQGKLLEAQCHLTAKL 173
>UNIPROTKB|I3L7C9 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IEA] [GO:2000617 "positive regulation of
histone H3-K9 acetylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0044030 "regulation of DNA methylation"
evidence=IEA] [GO:0043009 "chordate embryonic development"
evidence=IEA] [GO:0035067 "negative regulation of histone
acetylation" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0007098 "centrosome
cycle" evidence=IEA] [GO:0006349 "regulation of gene expression by
genetic imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:FP340289
Ensembl:ENSSSCT00000025436 Uniprot:I3L7C9
Length = 1865
Score = 130 (50.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 13 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 72
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLEN--FRQALQQGCGVSVKEIDSLMSLLSEKKR 156
+ F L+++LLK A ++ N F + + +KE S++ + + R
Sbjct: 73 ESTRFSQLVEELLKIIHAFELDTGLQFANNYNFSKKTENNSPEHLKEEVSIIQSMGYRNR 132
Query: 157 --KMEQEEAE 164
++ Q + E
Sbjct: 133 AKRLRQSDPE 142
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/102 (20%), Positives = 40/102 (39%)
Query: 242 SGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQC---LNQSGLSVV 298
+ + L+ G S SL+N D Q S ++ L+ D +C L S S +
Sbjct: 1239 NAVAAEGLSKEAGESLVSLKNSLNDCSDQVTSAKASQEHHLS-EDVRCSGSLFSSQCSAL 1297
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQE-SDKNIIHRE 339
+ D + +Q+ +Q ++ SDK ++ +
Sbjct: 1298 EDSAANTNSQDPFLMFDPPSKQVEHQSENQEVLSDKELVSED 1339
>RGD|1309302 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 RGD:1309302 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
GeneTree:ENSGT00530000063647 OrthoDB:EOG4V6ZHF IPI:IPI00368706
RefSeq:NP_001100457.1 UniGene:Rn.89276 Ensembl:ENSRNOT00000018964
GeneID:302977 KEGG:rno:302977 UCSC:RGD:1309302 NextBio:650458
Uniprot:D3ZJQ8
Length = 238
Score = 105 (42.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D + LC +C ++K C H FC CI L ++ CPCC + ++ ++K
Sbjct: 15 DCNFLCSVCHGVLKRPMRLPCSHIFCKKCIFQWLARQNTCPCCRKEVKRRKMVQ---VNK 71
Query: 110 LLKKTSARQIS-KTAS 124
L K Q+ K A+
Sbjct: 72 LRKTIGRLQVKCKNAA 87
Score = 50 (22.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 127 ENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRK 179
+N +Q GCG ++ ++ + R + ERN +LL+ L +R+
Sbjct: 136 QNGQQRCPLGCGATLAALEGEQHNCYRELRDAWVQRHERNRTLLLNLLGRVRR 188
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 98 (39.6 bits), Expect = 0.00031, P = 0.00031
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHYLTNNQLYP 103
C IC+ K+A ++ CGH FC+ C+ L N+ CP C ++ +++ P
Sbjct: 4 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIP 55
>UNIPROTKB|Q5T8Z5 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643353 SMR:Q5T8Z5
Ensembl:ENST00000456675 Uniprot:Q5T8Z5
Length = 92
Score = 98 (39.6 bits), Expect = 0.00031, P = 0.00031
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 44 VGVSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
+ ++EL+ ++C +C I + C HSFC CI+ +L CP C + +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPL 66
Query: 103 PNFLLDKLLK 112
N DK L+
Sbjct: 67 LNIRSDKTLQ 76
>UNIPROTKB|Q5T8Z6 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 GO:GO:0016574
GO:GO:0033092 GO:GO:0021903 GO:GO:0048103 EMBL:AL158211
UniGene:Hs.380403 UniGene:Hs.731287 HGNC:HGNC:1066
HOGENOM:HOG000231946 IPI:IPI00640733 SMR:Q5T8Z6 MINT:MINT-1403210
Ensembl:ENST00000416820 HOVERGEN:HBG071649 Uniprot:Q5T8Z6
Length = 105
Score = 98 (39.6 bits), Expect = 0.00031, P = 0.00031
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 44 VGVSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
+ ++EL+ ++C +C I + C HSFC CI+ +L CP C + +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPL 66
Query: 103 PNFLLDKLLK 112
N DK L+
Sbjct: 67 LNIRSDKTLQ 76
>UNIPROTKB|E1BYN8 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
KO:K11489 OMA:FYQSYPM CTD:84333 EMBL:AADN02027727 IPI:IPI00603520
RefSeq:XP_421668.1 UniGene:Gga.14951 ProteinModelPortal:E1BYN8
Ensembl:ENSGALT00000010507 GeneID:423796 KEGG:gga:423796
NextBio:20826216 Uniprot:E1BYN8
Length = 256
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG+ +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LD L++
Sbjct: 69 LRLDNTLEE 77
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 126 (49.4 bits), Expect = 0.00035, P = 0.00035
Identities = 28/120 (23%), Positives = 67/120 (55%)
Query: 374 HSANIVSSIEFD-RDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLS 432
HS V SI+F+ ++ L A+ G + ++D + +P+ ++ P + S ++C++
Sbjct: 128 HSGP-VQSIDFNVQNPNLLASGGSDSEVFIWDLSDPT-QPSALN-PGSKSQQSSDITCVA 184
Query: 433 WNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAW--SVDFSRTEPSMLVSGSDD 490
WNK + + S+ Y G + +WD+ +++++M + ++ S+ + +E + +V+ S+D
Sbjct: 185 WNKKVAHILGSASYNGYIVIWDLKSKKTLMTINDRNRKCKYRSIVWHPSEATQIVAASED 244
>UNIPROTKB|Q6J6J0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9600 "Pongo pygmaeus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 HOGENOM:HOG000230969 HOVERGEN:HBG050730
InterPro:IPR025994 Pfam:PF12820 EMBL:AY589040 EMBL:AF019077
ProteinModelPortal:Q6J6J0 SMR:Q6J6J0 STRING:Q6J6J0
InParanoid:Q6J6J0 Uniprot:Q6J6J0
Length = 1863
Score = 131 (51.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLQYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
Score = 46 (21.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 37/154 (24%), Positives = 63/154 (40%)
Query: 315 LQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYS----RLRVIAELRHG 370
+QK + ++ SD + R NA +AD VL YS ++ ++A H
Sbjct: 379 IQKVNEWFSRSDELLGSDDSHDGRSESNAKVADVLDVLNEVDEYSGSSEKIDLLASDPHE 438
Query: 371 DIFHSANIV--SSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKL 428
+ + V S+E + +D++F RR S V E + V E P +
Sbjct: 439 ALICKSERVHSKSVESNIEDKIFGKT--YRRKASLPNLSHVTENLIIGAFVTE-PQIIQE 495
Query: 429 SCLSWNKFSKNRIASSDY--EGIVTVWDVTTQQS 460
L+ NK + R A+S E + D+ Q++
Sbjct: 496 RPLT-NKLKRKRRATSGLHPEDFIKKADLAVQKT 528
>POMBASE|SPBC1734.06 [details] [associations]
symbol:rhp18 "Rad18 homolog Rhp18" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP] [GO:0006301
"postreplication repair" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IMP] [GO:0031144 "proteasome localization" evidence=IMP]
[GO:0065007 "biological regulation" evidence=NAS]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
PomBase:SPBC1734.06 Prosite:PS00518 GO:GO:0000077 GO:GO:0046872
GO:GO:0003684 EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0006301 GO:GO:0031144 eggNOG:COG5432
KO:K10627 TIGRFAMs:TIGR00599 OMA:YICKEFF OrthoDB:EOG4F4WMB
EMBL:AB079544 PIR:T39653 RefSeq:NP_595423.1
ProteinModelPortal:O74747 MINT:MINT-4782997 STRING:O74747
PRIDE:O74747 EnsemblFungi:SPBC1734.06.1 GeneID:2539686
KEGG:spo:SPBC1734.06 NextBio:20800840 Uniprot:O74747
Length = 387
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
LD + C IC + + +T+C H+FC CI +LR CP C ++L N +L+
Sbjct: 23 LDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACRAPEQESRLRKNTILE 82
Query: 109 KLLK 112
++L+
Sbjct: 83 EILE 86
>UNIPROTKB|Q95153 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0005694
"chromosome" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005694
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
GO:GO:0006633 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496 PANTHER:PTHR13763
CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605
OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820 EMBL:U50709
RefSeq:NP_001013434.1 UniGene:Cfa.140 ProteinModelPortal:Q95153
SMR:Q95153 STRING:Q95153 GeneID:403437 KEGG:cfa:403437
InParanoid:Q95153 NextBio:20816955 Uniprot:Q95153
Length = 1878
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 40/166 (24%), Positives = 79/166 (47%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L + S CP C + +T L
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VKEIDSLMSLLSEKKR- 156
+ F L+++LLK A ++ +++ + ++ +KE S++ + + R
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHLKEEVSIIQSMGYRNRA 134
Query: 157 -KMEQEEAER-----NMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
++ Q E E ++ + L L +R + + + Q YI+
Sbjct: 135 KRLRQSEPENPTLETSLSVQLSNLGIVRSLRTKQQIQPQNKSVYIE 180
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 97 (39.2 bits), Expect = 0.00040, P = 0.00040
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR----NKSDCPCCGHYLTNNQLYPN 104
L++++ C IC+ +++ CGH FC C T +R ++ CP C + P
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCT-TDVRPISGSRPVCPLCKKPFKKENIRPV 68
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQ 131
+ L L++ ++ K P E R+
Sbjct: 69 WQLASLVENIERLKVDKGRQPGEVTRE 95
>UNIPROTKB|L7N078 [details] [associations]
symbol:TRIM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA]
GeneTree:ENSGT00690000101646 EMBL:AAEX03012850
Ensembl:ENSCAFT00000010104 Uniprot:L7N078
Length = 562
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCII---THL----RNKSDCPCCGHYLTNNQ 100
++ ++ CPIC++++ E CGHSFC CI+ T L +S CP C
Sbjct: 83 DIRDEVTCPICLELLTEPVSIDCGHSFCQACIMGNSTELVMGQDGESSCPVCQTSYQPGD 142
Query: 101 LYPN 104
L PN
Sbjct: 143 LRPN 146
Score = 62 (26.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 19/94 (20%), Positives = 41/94 (43%)
Query: 155 KRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARD 214
K + EQ+EAER +++ + Q E IQT+ + ++ ++ E+ ++ +
Sbjct: 225 KLRQEQQEAERLTAVIIGKRTSWKNQMEPERHRIQTEFNKLRSILDKEEQRQLKKLEEEE 284
Query: 215 RYSVKL-----RMLGDDSNTRKSWLSSIDKNSSG 243
R + + L S T + +S ++ G
Sbjct: 285 RKGLSILEEAENELVQQSETLRELISDLELRCQG 318
>UNIPROTKB|F1RNQ5 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:FP102554
Ensembl:ENSSSCT00000008377 Uniprot:F1RNQ5
Length = 474
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 77/329 (23%), Positives = 137/329 (41%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHYLTNNQLYPN 104
+L +++ C IC+ ++ CGH+FC C+ L N+ CP C T + L PN
Sbjct: 5 DLQEELSCSICLDYFEDPVSIECGHNFCRDCLRRGLAQGCNQFPCPECRRPSTPSALRPN 64
Query: 105 FLLDKLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEKKRKME---- 159
+ L +L +K R+ + L + + L+ C ++ LM ++ + ++ +
Sbjct: 65 WALARLAQKARRRREGPASRGLCDRHGEPLRLFC----EDDQRLMCMVCRESQEHQAHTM 120
Query: 160 --QEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYS 217
+EA ++ + L C K+++ +Q DL +K E+ + R ++
Sbjct: 121 APMDEAFQSYRGKLLEAQCHLTAKLEKAIGLQ-DLE-MKNTAEWKEKMKNQRLRLSAEFA 178
Query: 218 VKLRM-LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHG- 275
KLR+ L ++ LS ++ + R +L+ + K ++ S
Sbjct: 179 -KLRLFLTEEEQLFLQRLSQEEEETKKKQREK-TLRLSQMVSALKQLISEVKEKSQSPEL 236
Query: 276 ---HQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESD 332
KD LT ++Q +N S L V+ K V Q ++E L KR Q+ P
Sbjct: 237 ELLQNPKDVLTRCENQDVNYS-LEVLHVKTV-CQLPMVKE--LLKRFQVPVNPALDTAHP 292
Query: 333 KNIIHREG-Y--NAGLADFQSVLTTFTRY 358
K + +EG Y N A LTT Y
Sbjct: 293 KLVFSQEGRYMKNGAAAAGSWPLTTAWSY 321
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00042
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIIT--HLRNKS-DCPCCGHYLTNNQLYPNFLLDKLL 111
C IC+ + ++ +T CGH FC+ C+ HL ++S DCP C + ++L P L +
Sbjct: 23 CNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVP--LYGR-- 78
Query: 112 KKTSARQISKTASPLE 127
K+SA SK+ LE
Sbjct: 79 GKSSADPRSKSIPGLE 94
>UNIPROTKB|E9PJJ9 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00977425 ProteinModelPortal:E9PJJ9 SMR:E9PJJ9
Ensembl:ENST00000531101 ArrayExpress:E9PJJ9 Bgee:E9PJJ9
Uniprot:E9PJJ9
Length = 187
Score = 111 (44.1 bits), Expect = 0.00044, P = 0.00044
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI--ITHLRNKSD-----CPCCGHYLTN 98
V + +++ CPICM ++E CGHSFC+ C+ + + +S CP C +
Sbjct: 7 VEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQP 66
Query: 99 NQLYPNFLLDKLLKK 113
L PN+ L +++K
Sbjct: 67 RNLRPNWQLANVVEK 81
>UNIPROTKB|A0JN86 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489
OrthoDB:EOG4NKBW6 OMA:FYQSYPM EMBL:BC126565 IPI:IPI00698156
RefSeq:NP_001071448.1 UniGene:Bt.59906 ProteinModelPortal:A0JN86
SMR:A0JN86 PRIDE:A0JN86 Ensembl:ENSBTAT00000006533 GeneID:528946
KEGG:bta:528946 CTD:84333 InParanoid:A0JN86
BioCyc:CATTLE:528946-MONOMER NextBio:20874930 Uniprot:A0JN86
Length = 255
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG+ +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEM 68
Query: 105 FLLDKLLKKTSARQISKTASPLE 127
LD L++ + + LE
Sbjct: 69 LRLDNTLEEIIFKLVPGLREQLE 91
>ASPGD|ASPL0000031841 [details] [associations]
symbol:AN5681 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005779 "integral
to peroxisomal membrane" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 EMBL:AACD01000098 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757
HOGENOM:HOG000180194 OrthoDB:EOG44TSJ5 RefSeq:XP_663285.1
ProteinModelPortal:Q5B199 STRING:Q5B199
EnsemblFungi:CADANIAT00003384 GeneID:2871973 KEGG:ani:AN5681.2
Uniprot:Q5B199
Length = 373
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
C +C++ K+ +T CGH FC+ C+ +R K +CP C L +++ P
Sbjct: 322 CTLCLESFKDPSVTTCGHVFCWTCVCDWVREKPECPLCRQELLASKVLP 370
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 109 (43.4 bits), Expect = 0.00047, P = 0.00047
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-----CPCCGHYLTNNQ 100
+S C IC+ ++K+ CGHS+C CI T N+ D CP C T
Sbjct: 6 ISVAQDQFSCSICLDLLKDPVTIPCGHSYCMNCI-TEYWNRRDLSINSCPQCRQTFTPKP 64
Query: 101 -LYPNFLLDKLLKKTSARQISKTASPLENF 129
L N +L ++++K A ++ +T P ++
Sbjct: 65 ALNKNVMLAEMVEKVKAIKV-QTVDPAPSY 93
>RGD|1583513 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1583513 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:AC127789
IPI:IPI00763179 Ensembl:ENSRNOT00000025020 UCSC:RGD:1583513
ArrayExpress:E9PTD5 Uniprot:E9PTD5
Length = 236
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG+ +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LD L++
Sbjct: 69 LRLDNTLEE 77
>UNIPROTKB|E2R173 [details] [associations]
symbol:TRIM21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:AAEX03012839
Ensembl:ENSCAFT00000009720 OMA:GQNANEV Uniprot:E2R173
Length = 469
Score = 122 (48.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 46/167 (27%), Positives = 77/167 (46%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYPNFLLDK 109
+++ CPIC+ + E CGHSFC+ CI ++ CP C H L PN+ L
Sbjct: 12 EEVTCPICLDPVVEPMSIDCGHSFCHKCISEVGKDGGGVCPVCQHTFLLRNLRPNWPLAN 71
Query: 110 LLKKTSARQISKTASPL--ENFRQALQQGCGVSVKEIDSLMSLL---SEKKRKMEQ---E 161
++ + +QI + A+ + + Q + + +E ++ + S+ R + E
Sbjct: 72 VVD--NLKQIGQNANEVTQREWCQVHGERLHLFCEEDGKILCWVCSQSQNHRNHKTVPVE 129
Query: 162 EAERNMQILLDF-LHCLRK-QKVDELKEIQTDLHYIKEDINAVERHR 206
EA + Q L L LRK QK+ E E+ T + + VERH+
Sbjct: 130 EAAQEYQEKLKVALRKLRKEQKLAEELEVNTAMKRAAWK-SQVERHK 175
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 300 KKRVHAQF-NDLQECYLQKRRQM 321
K+R+HA+F + +++RQM
Sbjct: 175 KRRIHAEFVQQINFLAAEEQRQM 197
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 96 (38.9 bits), Expect = 0.00051, P = 0.00051
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHL----RNKSDCPCC 92
CPIC+ A +T CGH FC+ CI+ +L + S CP C
Sbjct: 18 CPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPIC 59
>UNIPROTKB|F1PAI7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IEA] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IEA] [GO:0009048 "dosage compensation by inactivation of X
chromosome" evidence=IEA] [GO:0007098 "centrosome cycle"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:AAEX03006439 EMBL:AAEX03006438
Ensembl:ENSCAFT00000023190 Uniprot:F1PAI7
Length = 1882
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 34/129 (26%), Positives = 65/129 (50%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L + S CP C + +T L
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VKEIDSLMSLLSEKKR- 156
+ F L+++LLK A ++ +++ + ++ +KE S++ + + R
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHLKEEVSIIQSMGYRNRA 134
Query: 157 -KMEQEEAE 164
++ Q E E
Sbjct: 135 KRLRQSEPE 143
>DICTYBASE|DDB_G0273535 [details] [associations]
symbol:mip1-2 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
G + K++ CPIC + K T CGH FC CI+ L+ K CP C L + Y
Sbjct: 490 GGDKKSKNLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKKPY 547
>DICTYBASE|DDB_G0273399 [details] [associations]
symbol:mip1-1 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
G + K++ CPIC + K T CGH FC CI+ L+ K CP C L + Y
Sbjct: 490 GGDKKSKNLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKKPY 547
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 64/287 (22%), Positives = 113/287 (39%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ L K+ CPIC+ + + CGH+FC CI + S CP C H + L
Sbjct: 7 LARLQKETKCPICLDDLTDPVTVECGHNFCRSCIKDFWAGQQATSSCPVCRHQCQHRNLR 66
Query: 103 PNFLLDKLLKKTSARQ-----ISKTASPLENFRQALQQGCGVSVKEI-DSLMSLLSEKKR 156
N L +++ Q ++++ E QAL C ++ + D + S +
Sbjct: 67 SNAQLGNMIETAQLLQGMENKRHESSTSCERHNQALTLFCEDDLQLLCDQCVEPESHGRH 126
Query: 157 KMEQ--EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARD 214
++ E A + + L D+ L K +V E++ + + L+ K + E+ +
Sbjct: 127 QVLSITEAASLHRKHLQDYSKLL-KWEVKEIQGLMSALN--KRTVTLREQAEAQRSQLTS 183
Query: 215 RYSVKLRMLGDDSNTRKSWLSS----IDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQ 270
+R L + S L ++K I ++L G S L++ G+
Sbjct: 184 ECEKLMRFLDQEERAAFSRLEDEEMRLEKRLLDNI-AALEHHGSSLRDLLRHLMLTGELS 242
Query: 271 ANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQK 317
KD Q ++ S + V+ +RV F LQ LQK
Sbjct: 243 EAKMLSTVKDFYLNCRRQLISPS-IFPVQLRRVEYSF-PLQYSALQK 287
>MGI|MGI:2687279 [details] [associations]
symbol:Triml1 "tripartite motif family-like 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007275
"multicellular organismal development" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
MGI:MGI:2687279 Pfam:PF00097 Prosite:PS00518 GO:GO:0007275
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q9CQJ4
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357 CTD:339976
eggNOG:NOG267050 KO:K12038 OMA:GSYGRMP OrthoDB:EOG41C6W4
EMBL:AK077092 IPI:IPI00225944 RefSeq:NP_808410.1 UniGene:Mm.64542
ProteinModelPortal:Q8BVP1 SMR:Q8BVP1 STRING:Q8BVP1
PhosphoSite:Q8BVP1 PaxDb:Q8BVP1 PRIDE:Q8BVP1
Ensembl:ENSMUST00000059692 GeneID:244448 KEGG:mmu:244448
UCSC:uc009lnz.1 InParanoid:Q8BVP1 NextBio:386285 Bgee:Q8BVP1
CleanEx:MM_TRIML1 Genevestigator:Q8BVP1 Uniprot:Q8BVP1
Length = 470
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 42/164 (25%), Positives = 68/164 (41%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS---DCPCCGHYLTNNQLY 102
+ L +++ C IC+ T CGHSFC MC++ + CP C L
Sbjct: 13 MENLREELTCFICLDYFSSPVTTECGHSFCLMCLLKSWEEHNTPLSCPECWRTLGAPHFQ 72
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLS-------EKK 155
N L +L RQ+ E+ + + G S D S+++ K
Sbjct: 73 ANERLGRLAN--IGRQLRSQVLQSEDEQSICGRMPGPSWVFSDDEQSVINVSPPSQGTNK 130
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDI 199
E E++ + L D ++ LRK+K KE+Q L++ KE +
Sbjct: 131 ACFSSEAEEQHKEKLQDIINILRKKK----KEVQAILNHEKERV 170
>UNIPROTKB|F1RWB1 [details] [associations]
symbol:LOC100513607 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003129044.1
Ensembl:ENSSSCT00000009705 GeneID:100513607 KEGG:ssc:100513607
OMA:IERIYST Uniprot:F1RWB1
Length = 461
Score = 108 (43.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
+++L + CPIC+ +++ T CGH+FC+ C++ L+ CP C + + L
Sbjct: 7 LAQLQAEASCPICLDYLQDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPDRSLR 66
Query: 103 PN 104
N
Sbjct: 67 RN 68
Score = 54 (24.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 19/88 (21%), Positives = 42/88 (47%)
Query: 157 KMEQEEAER--NMQI--LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYR- 211
K + E A++ MQ+ D + ++KQ+ E++ H++ ++ +A+ ++ +
Sbjct: 152 KEQHEVAKKALEMQVSKTFDLMREVQKQRSKLQSEVEYMKHFLNKEHDAIHFRLLNNGKD 211
Query: 212 ARDRYSVKLRMLGDDSNTRKSWLSSIDK 239
+D+ + D S+ KS L I K
Sbjct: 212 VQDKIIESRNQISDHSSRLKSLLDEITK 239
>UNIPROTKB|E9PR29 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00983538 ProteinModelPortal:E9PR29 SMR:E9PR29
Ensembl:ENST00000533021 ArrayExpress:E9PR29 Bgee:E9PR29
Uniprot:E9PR29
Length = 198
Score = 111 (44.1 bits), Expect = 0.00058, P = 0.00058
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI--ITHLRNKSD-----CPCCGHYLTN 98
V + +++ CPICM ++E CGHSFC+ C+ + + +S CP C +
Sbjct: 7 VEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQP 66
Query: 99 NQLYPNFLLDKLLKK 113
L PN+ L +++K
Sbjct: 67 RNLRPNWQLANVVEK 81
>UNIPROTKB|E9PFC7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0007420
GO:GO:0032355 GO:GO:0005759 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0007584
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 IPI:IPI00945705 RefSeq:NP_009231.2 GeneID:672
HGNC:HGNC:1100 ChiTaRS:BRCA1 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 ProteinModelPortal:E9PFC7 SMR:E9PFC7
Ensembl:ENST00000471181 UCSC:uc002ict.3 ArrayExpress:E9PFC7
Bgee:E9PFC7 Uniprot:E9PFC7
Length = 1884
Score = 131 (51.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PN--F--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVS-VK-EIDSLMSL--LSEK 154
+ F L+++LLK A Q+ ++ A ++ +K E+ + S+ +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Query: 155 KRKMEQEEAERNMQ 168
KR ++ E ++Q
Sbjct: 135 KRLLQSEPENPSLQ 148
Score = 44 (20.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 32/128 (25%), Positives = 50/128 (39%)
Query: 224 GDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLT 283
G +S T S S + S I+T+ + LQ + + +A HG Q +S
Sbjct: 1371 GCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAVLEQHGSQPSNSYP 1430
Query: 284 G--SDSQCL----NQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIH 337
SDS L N + + +H Q N+ KR + T Q+S + I
Sbjct: 1431 SIISDSSALEDLRNPEQSTSEKDSHIHGQRNNSM---FSKRPREHISVLTSQKSSEYPIS 1487
Query: 338 R--EGYNA 343
+ EG +A
Sbjct: 1488 QNPEGLSA 1495
>UNIPROTKB|Q96EQ8 [details] [associations]
symbol:RNF125 "E3 ubiquitin-protein ligase RNF125"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0032480 HOGENOM:HOG000230946 EMBL:AK000463
EMBL:BC012021 IPI:IPI00410652 RefSeq:NP_060301.2 UniGene:Hs.633703
ProteinModelPortal:Q96EQ8 SMR:Q96EQ8 IntAct:Q96EQ8 STRING:Q96EQ8
PhosphoSite:Q96EQ8 DMDM:143811449 PRIDE:Q96EQ8
Ensembl:ENST00000217740 GeneID:54941 KEGG:hsa:54941 UCSC:uc002kxf.1
CTD:54941 GeneCards:GC18P029598 H-InvDB:HIX0014384 HGNC:HGNC:21150
HPA:HPA041514 MIM:610432 neXtProt:NX_Q96EQ8 PharmGKB:PA134950383
eggNOG:NOG46770 HOVERGEN:HBG098958 InParanoid:Q96EQ8 KO:K12170
OMA:RTRCGHV OrthoDB:EOG4SJ5FM PhylomeDB:Q96EQ8 GenomeRNAi:54941
NextBio:58082 Bgee:Q96EQ8 CleanEx:HS_RNF125 Genevestigator:Q96EQ8
GermOnline:ENSG00000101695 Uniprot:Q96EQ8
Length = 232
Score = 113 (44.8 bits), Expect = 0.00058, P = 0.00058
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRN-KSDCPCCGHYL 96
C +C++++ + T CGH FC CI T L+N K CP C YL
Sbjct: 37 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 79
>UNIPROTKB|Q86SE9 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6
OMA:FYQSYPM CTD:84333 EMBL:AK303014 EMBL:AL832003 EMBL:AL832496
EMBL:BC007377 EMBL:BC051845 IPI:IPI00328390 IPI:IPI00449145
RefSeq:NP_001243478.1 RefSeq:NP_001244030.1 RefSeq:NP_115749.2
UniGene:Hs.500512 ProteinModelPortal:Q86SE9 SMR:Q86SE9
IntAct:Q86SE9 STRING:Q86SE9 PhosphoSite:Q86SE9 DMDM:74750353
PRIDE:Q86SE9 DNASU:84333 Ensembl:ENST00000336126
Ensembl:ENST00000371687 Ensembl:ENST00000543648 GeneID:84333
KEGG:hsa:84333 UCSC:uc001khh.3 GeneCards:GC10P092979
HGNC:HGNC:28264 HPA:HPA038349 neXtProt:NX_Q86SE9
PharmGKB:PA134929149 InParanoid:Q86SE9 PhylomeDB:Q86SE9
ChiTaRS:PCGF5 GenomeRNAi:84333 NextBio:74097 Bgee:Q86SE9
CleanEx:HS_PCGF5 Genevestigator:Q86SE9 Uniprot:Q86SE9
Length = 256
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG+ +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LD L++
Sbjct: 69 LRLDNTLEE 77
>MGI|MGI:1923505 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1923505
Pfam:PF00097 Prosite:PS00518 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6 OMA:FYQSYPM
CTD:84333 EMBL:AK002387 EMBL:AK017984 EMBL:AK146133 EMBL:BC139258
EMBL:BC139259 EMBL:BC145590 IPI:IPI00135919 IPI:IPI00653832
RefSeq:NP_083784.1 UniGene:Mm.259180 UniGene:Mm.381165
UniGene:Mm.488093 UniGene:Mm.490414 ProteinModelPortal:Q3UK78
SMR:Q3UK78 IntAct:Q3UK78 PhosphoSite:Q3UK78 PRIDE:Q3UK78
Ensembl:ENSMUST00000062389 Ensembl:ENSMUST00000071267 GeneID:76073
KEGG:mmu:76073 UCSC:uc008hhi.1 UCSC:uc008hhk.1 InParanoid:Q3UK78
NextBio:344549 Bgee:Q3UK78 CleanEx:MM_PCGF5 Genevestigator:Q3UK78
Uniprot:Q3UK78
Length = 256
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG+ +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LD L++
Sbjct: 69 LRLDNTLEE 77
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
L+WNK +N +AS + V VWDV T + + E HEK+ +V ++ P +L+SGS D
Sbjct: 222 LAWNKEFRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRD 281
Query: 491 CKVL 494
V+
Sbjct: 282 RTVV 285
>ZFIN|ZDB-GENE-080723-33 [details] [associations]
symbol:pcgf5a "polycomb group ring finger 5a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080723-33 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 EMBL:BC163687 EMBL:BC163702
IPI:IPI00858490 RefSeq:NP_001122184.1 UniGene:Dr.134043
ProteinModelPortal:B3DK16 STRING:B3DK16 Ensembl:ENSDART00000104715
GeneID:562327 KEGG:dre:562327 CTD:562327 HOGENOM:HOG000231946
KO:K11489 OMA:EESNECP OrthoDB:EOG4NKBW6 NextBio:20884351
Bgee:B3DK16 Uniprot:B3DK16
Length = 234
Score = 113 (44.8 bits), Expect = 0.00060, P = 0.00060
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + ++ + C IC +IK +T C H+FC CI+ H ++CP CG +
Sbjct: 9 VRDFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LDK L++
Sbjct: 69 LRLDKTLEE 77
>UNIPROTKB|F8VSP7 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0045637 "regulation of myeloid cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC073896 HGNC:HGNC:18401
IPI:IPI01021772 ProteinModelPortal:F8VSP7 SMR:F8VSP7
Ensembl:ENST00000549038 ArrayExpress:F8VSP7 Bgee:F8VSP7
Uniprot:F8VSP7
Length = 190
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 47/183 (25%), Positives = 89/183 (48%)
Query: 48 ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
++D+D++CPIC +++E C H+FC CI + CP +T L P
Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRP--- 67
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSE----KKRKMEQEE 162
+ ++++ +SK +N A+ GC V+ +D+LMS LS+ KR + E+
Sbjct: 68 VPRIMRN----MLSKLQIACDN---AVF-GCSAVVR-LDNLMSHLSDCEHNPKRPVTCEQ 118
Query: 163 AERNMQILLDFL--H-CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVK 219
+++ D L H C++ + +++ QT + + E +A +H++ + RD +K
Sbjct: 119 G-CGLEMPKDELPNHNCIKHLR-SVVQQQQTRIAEL-EKTSAEHKHQL-AEQKRDIQLLK 174
Query: 220 LRM 222
M
Sbjct: 175 AYM 177
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 95 (38.5 bits), Expect = 0.00065, P = 0.00065
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYP 103
C IC++ +EA ++ CGH +C+ C+ L + +CP C ++ ++ P
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVP 78
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 111 (44.1 bits), Expect = 0.00068, P = 0.00068
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRN-KSDCPCCGHYL 96
C +C++++ T CGH FC CI T L+N K CP C YL
Sbjct: 37 CSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 79
>MGI|MGI:2137359 [details] [associations]
symbol:Trim34a "tripartite motif-containing 34A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070206 "protein trimerization" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2137359 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
EMBL:AF220139 EMBL:AF220140 EMBL:AF220141 IPI:IPI00121329
IPI:IPI00322251 IPI:IPI00462917 RefSeq:NP_109609.2
UniGene:Mm.326945 ProteinModelPortal:Q99PP6 SMR:Q99PP6
STRING:Q99PP6 PRIDE:Q99PP6 DNASU:94094 Ensembl:ENSMUST00000106854
Ensembl:ENSMUST00000143414 GeneID:94094 KEGG:mmu:94094
UCSC:uc009ivr.1 UCSC:uc009ivs.1 UCSC:uc009ivt.1 CTD:94094
eggNOG:NOG259921 InParanoid:Q99PP6 KO:K11999 NextBio:352091
Bgee:Q99PP6 CleanEx:MM_TRIM34 Genevestigator:Q99PP6
GermOnline:ENSMUSG00000056144 Uniprot:Q99PP6
Length = 485
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT------HLRNKSDCPCCGHYLTN 98
G++ + + CP+C +++ +A CGH C C+IT + R KS CP CG +
Sbjct: 5 GLTNIQEKTTCPVCQELLTKALSLGCGHRVCQACLITKKNAVINPREKSSCPVCGTRFSL 64
Query: 99 NQLYPNFLLDKLLKKTSARQISK---TASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEK 154
L N L ++++ ++ T L + + L C K I + E
Sbjct: 65 ENLQANKHLANVVERLGEVKLKPDIGTKRDLCVHHGEKLLLFCKEDKKAICWVCERSQEH 124
Query: 155 K--RKMEQEEAERNMQILLD-FLHCLRKQKVDELKEIQTDLHYIKED 198
+ EEA R Q L L LRK++ ++++ ++ D IKED
Sbjct: 125 RGHHTFLWEEAVRECQENLQKALTRLRKEQ-EKVETLEAD---IKED 167
>UNIPROTKB|Q9BYJ4 [details] [associations]
symbol:TRIM34 "Tripartite motif-containing protein 34"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 EMBL:CH471064 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG259921 KO:K11999
EMBL:AB039902 EMBL:AB039903 EMBL:AB039904 EMBL:AF220143
EMBL:AF220144 EMBL:AK027876 EMBL:AL583914 IPI:IPI00107816
IPI:IPI00719282 RefSeq:NP_001003827.1 RefSeq:NP_067629.2
RefSeq:NP_569074.2 UniGene:Hs.729048 PDB:2EGP PDBsum:2EGP
ProteinModelPortal:Q9BYJ4 SMR:Q9BYJ4 IntAct:Q9BYJ4
PhosphoSite:Q9BYJ4 DMDM:55976584 PaxDb:Q9BYJ4 PRIDE:Q9BYJ4
DNASU:53840 Ensembl:ENST00000429814 Ensembl:ENST00000457787
Ensembl:ENST00000514226 GeneID:53840 KEGG:hsa:53840 UCSC:uc001mbh.3
CTD:53840 GeneCards:GC11P005618 GeneCards:GC11P005619
HGNC:HGNC:10063 MIM:605684 neXtProt:NX_Q9BYJ4 PharmGKB:PA35533
InParanoid:Q9BYJ4 EvolutionaryTrace:Q9BYJ4 GenomeRNAi:53840
NextBio:56186 ArrayExpress:Q9BYJ4 Bgee:Q9BYJ4 CleanEx:HS_TRIM34
Genevestigator:Q9BYJ4 GermOnline:ENSG00000121236 Uniprot:Q9BYJ4
Length = 488
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 45/177 (25%), Positives = 77/177 (43%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCG-----HYL 96
+ +++ CPIC++++ E CGHS C CI +T + KS CP CG +L
Sbjct: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHL 68
Query: 97 TNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK- 155
NQ N ++++L + + K ++ + L C K I L E +
Sbjct: 69 QANQHLAN-IVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRG 127
Query: 156 -RKMEQEEAERNMQILLD-FLHCLRKQKVDELKEIQTDLHYIKEDIN---AVERHRI 207
+ EE + Q L L L+K++ +E ++++ D+ K ER RI
Sbjct: 128 HHTVLTEEVFKECQEKLQAVLKRLKKEE-EEAEKLEADIREEKTSWKYQVQTERQRI 183
>DICTYBASE|DDB_G0277955 [details] [associations]
symbol:nup43 "nucleoporin 43" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277955 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GenomeReviews:CM000152_GR GO:GO:0015031
EMBL:AAFI02000023 GO:GO:0031965 GO:GO:0005643 GO:GO:0051028
RefSeq:XP_642030.1 ProteinModelPortal:Q54Z22 PRIDE:Q54Z22
EnsemblProtists:DDB0235245 GeneID:8621241 KEGG:ddi:DDB_G0277955
eggNOG:NOG270547 InParanoid:Q54Z22 KO:K14305 OMA:INRLICC
Uniprot:Q54Z22
Length = 417
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWN 434
S N+V SI +Q+ + + R IK +D S ++P V + P ++ L+ +
Sbjct: 235 SVNVVKSIT---SNQIITSGELGRYIKFWDIRSNSSQP--VKTIKTQCP---RIFSLAIH 286
Query: 435 KFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
K ++ IA+ +G V ++D+ S+ + + H W + FS++ P+ L S S+D
Sbjct: 287 KDEQHIIAAGSSDGQVNLFDIRNDYSIDQNKTHNSNVWELSFSKSNPNQLYSCSED 342
>UNIPROTKB|F1NVY8 [details] [associations]
symbol:LNX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 GeneTree:ENSGT00650000092901
OMA:LQHCKKS EMBL:AADN02031302 IPI:IPI00811998
Ensembl:ENSGALT00000022592 Uniprot:F1NVY8
Length = 717
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 35/127 (27%), Positives = 55/127 (43%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY--LTN---NQLY 102
E+D D++C IC+Q + + T CGH+FC C+ L K CP L N + +
Sbjct: 32 EVDDDLICHICLQPLLQPLDTLCGHTFCTACLTNFLLEKDFCPMDRKLVALQNCRKSSIL 91
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
N LLDKL+ + + Q Q C + S L E+KR+ +
Sbjct: 92 VNNLLDKLMVSCPFTEHCSEVVQRGHLEQHFQTRCKGA-----SHYGLTKERKRRSQDCS 146
Query: 163 AERNMQI 169
+R+ +
Sbjct: 147 PDRSSSL 153
>MGI|MGI:1914754 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 MGI:MGI:1914754 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q9H0F5 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:146310 eggNOG:NOG319521 GeneTree:ENSGT00530000063647
HOGENOM:HOG000154154 HOVERGEN:HBG087956 OMA:PCCRKEV
OrthoDB:EOG4V6ZHF EMBL:AK005854 EMBL:BC049562 IPI:IPI00131917
RefSeq:NP_080481.1 UniGene:Mm.46159 ProteinModelPortal:Q9CQ29
SMR:Q9CQ29 STRING:Q9CQ29 PhosphoSite:Q9CQ29 PRIDE:Q9CQ29
Ensembl:ENSMUST00000008626 GeneID:67504 KEGG:mmu:67504
UCSC:uc008axw.1 InParanoid:Q9CQ29 NextBio:324764 Bgee:Q9CQ29
CleanEx:MM_RNF151 Genevestigator:Q9CQ29
GermOnline:ENSMUSG00000008482 Uniprot:Q9CQ29
Length = 239
Score = 107 (42.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D LC +C ++K C H FC CI L ++ CPCC +T ++ ++K
Sbjct: 15 DCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVE---VNK 71
Query: 110 LLKKTSARQIS-KTAS 124
L K Q+ K A+
Sbjct: 72 LRKTIGRLQVKCKNAA 87
Score = 44 (20.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 127 ENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRK 179
+N +Q GCG ++ ++ + R + ERN +LL L +R+
Sbjct: 136 QNGQQRCPLGCGSTLAALEGEHHNCYRELRDAWVQRHERNRTLLLGLLGRVRR 188
>MGI|MGI:1918178 [details] [associations]
symbol:Trim69 "tripartite motif-containing 69" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1918178 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0006915 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
EMBL:AL845457 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104222 CTD:140691 eggNOG:NOG296667 KO:K12034
EMBL:AF334958 EMBL:BC050815 IPI:IPI00330670 RefSeq:NP_536771.2
UniGene:Mm.379188 ProteinModelPortal:Q80X56 SMR:Q80X56
IntAct:Q80X56 STRING:Q80X56 PhosphoSite:Q80X56 PaxDb:Q80X56
PRIDE:Q80X56 Ensembl:ENSMUST00000036089 GeneID:70928 KEGG:mmu:70928
UCSC:uc008mah.1 InParanoid:Q80X56 OMA:TEELAIY OrthoDB:EOG4KSPJQ
NextBio:332607 Bgee:Q80X56 CleanEx:MM_TRIM69 Genevestigator:Q80X56
Uniprot:Q80X56
Length = 500
Score = 118 (46.6 bits), Expect = 0.00074, P = 0.00074
Identities = 45/175 (25%), Positives = 83/175 (47%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGHYLTNNQ 100
V + +L ++ CP+C ++ + CGH+FC CI + + S CP C +
Sbjct: 31 VVIQDLTTELHCPLCNDWFRDPLMLTCGHNFCQDCIQSFWKVHSKETFCPDCKMLCQYSN 90
Query: 101 LYPNFLLDKLLKKTSARQISK--TASPL--ENFRQ-ALQQGCGVSVKEIDSLMSLLSEKK 155
N +L+KL++K + K P EN + + +G + + D+ +S+ + K
Sbjct: 91 CTFNLVLEKLVEKIKKLPLLKGHPQCPEHGENLKLFSKPEGKMICFQCKDARLSM-GQSK 149
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKED-INAVERHRIDL 209
++ EA R + L + Q LKE+Q+ L I++D I+A + ++I L
Sbjct: 150 DFLQISEAVR---FFTEELAIYQSQLQTTLKELQS-LRTIQKDAISAYKDNKIQL 200
>UNIPROTKB|J9P2L6 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000045871 Uniprot:J9P2L6
Length = 229
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGIQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LD L++
Sbjct: 69 LRLDNTLEE 77
>TAIR|locus:2171569 [details] [associations]
symbol:AT5G47430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR001841
InterPro:IPR001878 InterPro:IPR014891 Pfam:PF08783 PROSITE:PS51282
SMART:SM00184 SMART:SM00343 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10624 EMBL:AK316913
IPI:IPI00547250 RefSeq:NP_199554.2 UniGene:At.29893
ProteinModelPortal:B9DFV2 SMR:B9DFV2 PRIDE:B9DFV2
EnsemblPlants:AT5G47430.1 GeneID:834790 KEGG:ath:AT5G47430
TAIR:At5g47430 HOGENOM:HOG000015179 OMA:IISKSMC PhylomeDB:B9DFV2
ProtClustDB:CLSN2699121 Genevestigator:B9DFV2 Uniprot:B9DFV2
Length = 892
Score = 121 (47.7 bits), Expect = 0.00075, P = 0.00075
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V EL ++ CP+C +++K+A LT+ C SFC CI H+ +KS C C + + L P
Sbjct: 286 VGELPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIISKSMCVCGRSDVLADDLLP 345
Query: 104 NFLLDKLLKKTSARQISKTASPLEN 128
N K L+ T R + EN
Sbjct: 346 N----KTLRDTINRILEAGNDSTEN 366
>UNIPROTKB|Q4QR06 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 CTD:84759 KO:K11487 EMBL:BC097736
RefSeq:NP_001089498.2 UniGene:Xl.19589 ProteinModelPortal:Q4QR06
GeneID:734550 KEGG:xla:734550 Xenbase:XB-GENE-6255892
Uniprot:Q4QR06
Length = 259
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00079
Identities = 41/205 (20%), Positives = 90/205 (43%)
Query: 44 VGVSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
V + EL++ ++C +C I +T C H+FC CI+ +L+ CP C + Q
Sbjct: 34 VKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPLCNIKIHETQPL 93
Query: 103 PNFLLDKLLKKTSARQI----SKTASPLENF--RQALQ---QGCGV--SVKEIDSLMSLL 151
N LD++++ + + S + +F + L+ Q V SV ++ L L
Sbjct: 94 LNLKLDRVMQDIVYKLVPGLQENEDSRIRDFYHSRGLERVLQPSAVEDSVGDVSQLSLSL 153
Query: 152 SEKKRKMEQEEAERNMQILLDFLHCLRKQK--VDELKEIQTDLHYIKEDINAVERHRIDL 209
+ ++ + ++ + L+ + + +K + + K ++ + + V HR+
Sbjct: 154 AVSQKTSHYYRNDEHVCLCLEKVSSGKDKKKFILQQKYVRCSVRSEIRHLRRVLSHRLSA 213
Query: 210 YRARDRYSVKLRMLGDDSNTRKSWL 234
A+ + + ++L D ++ WL
Sbjct: 214 PLAQVQLLIDNKVLPDHMTMKQLWL 238
>UNIPROTKB|F8VSB6 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0045637 "regulation of myeloid cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC073896 HGNC:HGNC:18401
IPI:IPI01020852 ProteinModelPortal:F8VSB6 SMR:F8VSB6
Ensembl:ENST00000552244 ArrayExpress:F8VSB6 Bgee:F8VSB6
Uniprot:F8VSB6
Length = 201
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 47/183 (25%), Positives = 89/183 (48%)
Query: 48 ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
++D+D++CPIC +++E C H+FC CI + CP +T L P
Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRP--- 67
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSE----KKRKMEQEE 162
+ ++++ +SK +N A+ GC V+ +D+LMS LS+ KR + E+
Sbjct: 68 VPRIMRN----MLSKLQIACDN---AVF-GCSAVVR-LDNLMSHLSDCEHNPKRPVTCEQ 118
Query: 163 AERNMQILLDFL--H-CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVK 219
+++ D L H C++ + +++ QT + + E +A +H++ + RD +K
Sbjct: 119 G-CGLEMPKDELPNHNCIKHLR-SVVQQQQTRIAEL-EKTSAEHKHQL-AEQKRDIQLLK 174
Query: 220 LRM 222
M
Sbjct: 175 AYM 177
>UNIPROTKB|I3LP53 [details] [associations]
symbol:LOC100621782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003356978.1
Ensembl:ENSSSCT00000028301 GeneID:100621782 KEGG:ssc:100621782
OMA:ESIHIRY Uniprot:I3LP53
Length = 460
Score = 117 (46.2 bits), Expect = 0.00084, P = 0.00084
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
+++L + CPIC+ +++ T CGH+FC+ CI+ L+ CP C + + L
Sbjct: 7 LAQLQAETSCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPDRSLR 66
Query: 103 PN----FLLD--KLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEI--DSLMSLLSE 153
N ++D K L T + PL E Q L C ++ + +S +
Sbjct: 67 RNTQLCHMVDVVKQLPNTEGEGKQQEEKPLCEKHHQVLSLFCEEDLELLCPQCQVSCDHQ 126
Query: 154 KKRKMEQEEAER-NMQILLDFLHCLRKQ--KVDELKEIQTDLHYIKEDINAVERHRIDLY 210
+ E+A + + L + L+KQ + D ++Q Y E + VE + +L+
Sbjct: 127 DHHLVPMEQAAACHRKRLKGSIEPLKKQLEEADMALDMQVSKSY--ELLWRVEHKKRNLH 184
Query: 211 R 211
R
Sbjct: 185 R 185
>UNIPROTKB|E1BID7 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:DAAA02030051 IPI:IPI00717661
Ensembl:ENSBTAT00000009893 Uniprot:E1BID7
Length = 502
Score = 113 (44.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHYLTNNQ 100
V + ++ ++ CP+C ++A + +CGH+FC CI + N++ CP C +
Sbjct: 32 VQIQDITTELHCPLCNDWFRDALMLSCGHNFCQSCIQNFWKQQANETFCPECKMLCQYSN 91
Query: 101 LYPNFLLDKLLKK 113
N +L+KL++K
Sbjct: 92 CTFNLVLEKLVEK 104
Score = 48 (22.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 108 DKLLKKTSARQISKTASPLENFRQAL--QQG-CGVSVKEIDSLMSLLSE-----KKRKME 159
D L +++ + + + F + L QG ++KE+ SL ++ + K+ K+
Sbjct: 141 DARLSVGQSKEFLQISDAVHFFTEELTIHQGQLEATLKELQSLKNMQKDAIAAHKENKLH 200
Query: 160 -QEEAERNMQILLDFLHCLRKQKVDELKE 187
Q+ L FLH K + EL+E
Sbjct: 201 LQQHISLEFLKLHQFLHSKEKDLLSELRE 229
>ZFIN|ZDB-GENE-090507-8 [details] [associations]
symbol:ftr43 "finTRIM family, member 43" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-090507-8 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OrthoDB:EOG4R23TJ HOGENOM:HOG000234136
HOVERGEN:HBG106862 eggNOG:NOG319664 EMBL:BC095315 IPI:IPI00510507
RefSeq:NP_001019821.1 UniGene:Dr.114072 ProteinModelPortal:Q503I6
GeneID:553628 KEGG:dre:553628 CTD:553628 InParanoid:Q503I6
NextBio:20880365 Uniprot:Q503I6
Length = 440
Score = 118 (46.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 45 GVSELDKDM-LCPICMQIIKEAFLTACGHSFCYMCIIT-----HLRNKSDCPCCGHYLTN 98
GV+ +D+D +CP+C+ ++++ ACGHS+C CI L+ CP C T
Sbjct: 5 GVT-VDQDQFMCPVCLNLLQDPVTIACGHSYCMSCITDCWNQEELKRIYSCPLCKQSFTP 63
Query: 99 NQ-LYPNFLLDKLLKKTSARQISKTASP 125
L N + ++L+K ++ +TA+P
Sbjct: 64 RPALAKNVVFAEMLEKLQKSRL-QTAAP 90
Score = 41 (19.5 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 18/89 (20%), Positives = 35/89 (39%)
Query: 126 LENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDEL 185
+ FR LQQ +KEI + + + +Q + K + L
Sbjct: 337 VSQFRDKLQQFASNEIKEISKTVKTVKVIQTPEDQTSKVVQQYSPRAVVSTTEKSRDQIL 396
Query: 186 KEIQTDLHYIKEDINAVERHRIDLYRARD 214
K + D+ + DI+ + H+ ++Y R+
Sbjct: 397 KTL--DM-FRNRDISNLSTHQGNMYGQRN 422
>UNIPROTKB|Q8WVD3 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 EMBL:CH471088
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 CleanEx:HS_NARF
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AF162680 EMBL:AK023579
EMBL:AK315761 EMBL:BT006878 EMBL:CR457150 EMBL:BC018107
EMBL:AL133557 IPI:IPI00012239 IPI:IPI00328938 PIR:T43439
RefSeq:NP_001178253.2 RefSeq:NP_057355.2 RefSeq:NP_937761.1
UniGene:Hs.302408 ProteinModelPortal:Q8WVD3 SMR:Q8WVD3
IntAct:Q8WVD3 MINT:MINT-1479614 STRING:Q8WVD3 PhosphoSite:Q8WVD3
DMDM:74762632 PRIDE:Q8WVD3 DNASU:51444 Ensembl:ENST00000257190
Ensembl:ENST00000261593 GeneID:51444 KEGG:hsa:51444 UCSC:uc002kxg.3
UCSC:uc002kxh.3 GeneCards:GC18P029671 HGNC:HGNC:17765 HPA:HPA041101
HPA:HPA041373 neXtProt:NX_Q8WVD3 PharmGKB:PA134952071
InParanoid:Q8WVD3 PhylomeDB:Q8WVD3 GenomeRNAi:51444 NextBio:55035
Bgee:Q8WVD3 CleanEx:HS_RNF138 Genevestigator:Q8WVD3 Uniprot:Q8WVD3
Length = 245
Score = 112 (44.5 bits), Expect = 0.00089, P = 0.00089
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 47 SELDKDMLCPICMQIIKEAF-LTACGHSFCYMCIITHLRNK-SDCPCC-GHYLTNNQLYP 103
S + D CP+C +++K TAC H FC C +T +R + CP C G+ + P
Sbjct: 10 SYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACP 69
Query: 104 NFLLD--KLLKKTS 115
LD +++K S
Sbjct: 70 ERALDLENIMRKFS 83
>UNIPROTKB|F1SE69 [details] [associations]
symbol:TOPORS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032391 "photoreceptor connecting cilium" evidence=IDA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] [GO:0051443 "positive regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044547 "DNA
topoisomerase binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0036064 "cilium basal body" evidence=IEA] [GO:0019789 "SUMO
ligase activity" evidence=IEA] [GO:0016925 "protein sumoylation"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003823 "antigen binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000930 "gamma-tubulin
complex" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0045893
GO:GO:0008630 GO:GO:0043161 GO:GO:0005814 GO:GO:0003823
GO:GO:0046872 GO:GO:0003677 GO:GO:0016607 GO:GO:0016605
GO:GO:0008270 GO:GO:0042127 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000922 GO:GO:0000930 GO:GO:0051457
InterPro:IPR017907 GO:GO:0070936 GO:GO:0032391 GO:GO:0051443
GO:GO:0016925 GO:GO:0006513 GO:GO:0036064 GO:GO:0019789
GeneTree:ENSGT00530000064170 OMA:DIINFRR EMBL:CU928691
Ensembl:ENSSSCT00000012046 Uniprot:F1SE69
Length = 1049
Score = 102 (41.0 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 47 SELDKDMLCPICMQIIKE-AFLTACGHSFCYMCIITHLRNKSDCPCC 92
++ D CPIC+ ++L C H FC+ C+ +NK++CP C
Sbjct: 98 ADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLC 144
Score = 67 (28.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 39/201 (19%), Positives = 84/201 (41%)
Query: 114 TSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDF 173
+S+ Q+ + S L N + + V+ + + + + + + + + N +++ F
Sbjct: 430 SSSEQVQASMSSLLNTSDSSDEEL-VTGRATSQIQGVQTNEDLNNDSDSSSDNC-VIVGF 487
Query: 174 LHCLRKQKVDELKEIQTDLHYIK--EDINAVE-RHRIDLYRARD----RYSVKLRMLGDD 226
+ L ++ EL E+ +D + E + V+ + + Y + D R S +LG D
Sbjct: 488 VKPLA-ERTPELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDVSRCSSPRSVLGKD 546
Query: 227 SNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNK-KGDGKAQANSHGHQRKDSLTGS 285
K S + S ++ SS L + +GD +H H+R+ S
Sbjct: 547 EQINKGHCDSGTRIKSK--KEEKHSTSLSSPRDLSSSIRGDRVYSPYTHRHRRRGRSRSS 604
Query: 286 DSQCLNQSGLSVVRKKRVHAQ 306
DS+ ++SG +++ H +
Sbjct: 605 DSRSQSRSGHDQKNRRKHHGK 625
>UNIPROTKB|I3LH17 [details] [associations]
symbol:I3LH17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
OMA:WILGVCA Ensembl:ENSSSCT00000029217 Uniprot:I3LH17
Length = 483
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 40/176 (22%), Positives = 89/176 (50%)
Query: 45 GVSE-LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-------LRNKSDCPCCG-HY 95
G+ E + +++ CPIC++++KE CGHSFC C+ + L KS+CP C Y
Sbjct: 4 GILENIREEVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEGKSNCPVCRVSY 63
Query: 96 LTNN-QLYPNF--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLS 152
N +L + ++++L K + + ++ + + + + L C KE ++ +
Sbjct: 64 QPGNLRLNRHVANIVERLRKVSLSPEVEQKGNLCVHHEEKLLFFC----KEDGKVICWIC 119
Query: 153 EKKRK-------MEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINA 201
E+ ++ + +E A+ + L D L L++++ E ++++ ++E+++A
Sbjct: 120 ERSQQHCDHQTFLVEEVAQEYQKKLQDALERLQEEQ-KEAEKLEAQ---VREEVSA 171
>UNIPROTKB|F1RLV7 [details] [associations]
symbol:LOC100738990 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000016021 OMA:HGEGGIS Uniprot:F1RLV7
Length = 492
Score = 117 (46.2 bits), Expect = 0.00092, P = 0.00092
Identities = 40/176 (22%), Positives = 89/176 (50%)
Query: 45 GVSE-LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-------LRNKSDCPCCG-HY 95
G+ E + +++ CPIC++++KE CGHSFC C+ + L KS+CP C Y
Sbjct: 4 GILENIREEVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEGKSNCPVCRVSY 63
Query: 96 LTNN-QLYPNF--LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLS 152
N +L + ++++L K + + ++ + + + + L C KE ++ +
Sbjct: 64 QPGNLRLNRHVANIVERLRKVSLSPEVEQKGNLCVHHEEKLLFFC----KEDGKVICWIC 119
Query: 153 EKKRK-------MEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINA 201
E+ ++ + +E A+ + L D L L++++ E ++++ ++E+++A
Sbjct: 120 ERSQQHCDHQTFLVEEVAQEYQKKLQDALERLQEEQ-KEAEKLEAQ---VREEVSA 171
>UNIPROTKB|Q5C8T6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9595 "Gorilla gorilla gorilla" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY899872 EMBL:AY899866 EMBL:AY899867
EMBL:AY899868 EMBL:AY899869 EMBL:AY899870 EMBL:AY899871
EMBL:AY710300 EMBL:AY740620 EMBL:DQ298178 EMBL:AY843510
EMBL:AY923178 EMBL:DQ437600 ProteinModelPortal:Q5C8T6 SMR:Q5C8T6
Uniprot:Q5C8T6
Length = 493
Score = 117 (46.2 bits), Expect = 0.00093, P = 0.00093
Identities = 35/153 (22%), Positives = 67/153 (43%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIIT-HLRN-----KSDCPCCGHYLTNNQLYPN 104
+++ CPIC++++ + CGHSFC C+ H ++ +S CP C + PN
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKGESSCPVCRISYQPENIRPN 70
Query: 105 FLLDKLLKKTSARQISKTASPLENFR---QALQQGCGVSVKEIDSLMSLLSEKK--RKME 159
+ +++K ++S +++ + L C K I L E +
Sbjct: 71 RHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFL 130
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDL 192
EE + Q+ L + +QK E +E++ D+
Sbjct: 131 TEEVAQECQVKLQAALEMLRQKQQEAEELEADI 163
>UNIPROTKB|E2QWA4 [details] [associations]
symbol:TRIM22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070206 "protein trimerization" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
KO:K11999 CTD:10346 EMBL:AAEX03012850 RefSeq:XP_542402.2
ProteinModelPortal:E2QWA4 Ensembl:ENSCAFT00000010123 GeneID:485284
KEGG:cfa:485284 OMA:EARIVSF NextBio:20859324 Uniprot:E2QWA4
Length = 494
Score = 117 (46.2 bits), Expect = 0.00093, P = 0.00093
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCII-------THLRNKSDCPCCGHYLTNN 99
+ + KD+ CPIC++++ CGHSFC CI TH + CP C
Sbjct: 7 ANIQKDVTCPICLELLTMPLSLDCGHSFCQACITAKSMESGTHQGEEGTCPVCQCKYQFW 66
Query: 100 QLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK--RK 157
L PN L + KK + E + L C K I + +E + +
Sbjct: 67 NLRPNQPLANIAKKVRENMSPQKQKLCEVHGEKLLTFCKEDGKAICQHCAQSAEHRGHQI 126
Query: 158 MEQEEAERNMQILLDF-LHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRY 216
E+ + Q L L LRK+ +++E++ D IKE + + H + R R
Sbjct: 127 FFIEKVIKEYQEKLQAALKKLRKEHT-KVEELEAD---IKEKRVSWKNH---MQSERQRI 179
Query: 217 SVKLRMLGDDSNTR-KSWLSSIDKNSSGIITSSLNAR 252
+ D N+ K L ++++ ++ + + AR
Sbjct: 180 LKGFNEMRDILNSEEKKVLQKLEEDEVNVLDNLIVAR 216
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 98 (39.6 bits), Expect = 0.00093, P = 0.00093
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
L+ ++ C IC + EA C HSFC CI + K +CP C
Sbjct: 5 LENELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPIC 48
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 34/124 (27%), Positives = 65/124 (52%)
Query: 369 HGDIFHSAN-IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSK 427
H S N VSS++F D +L A+A + I+ + + +N+P + PV E
Sbjct: 16 HSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI-NTINDP--IAEPVQEFTGHEN 72
Query: 428 -LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVS 486
+S ++++ ++ +++SD + + +WDV T + H A+ V+F+ + +M+VS
Sbjct: 73 GISDVAFSSDARFIVSASD-DKTLKLWDVETGSLIKTLIGHTNYAFCVNFN-PQSNMIVS 130
Query: 487 GSDD 490
GS D
Sbjct: 131 GSFD 134
>UNIPROTKB|A9R9Q6 [details] [associations]
symbol:TRIM40 "Tripartite motif-containing protein 40"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:18736 eggNOG:NOG263238
HOVERGEN:HBG057956 IPI:IPI00893135 SMR:A9R9Q6
Ensembl:ENST00000445004 Uniprot:A9R9Q6
Length = 229
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 51/201 (25%), Positives = 89/201 (44%)
Query: 54 LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-----CPCCGHYLTNNQLYPNFLLD 108
+CPIC + +KEA T CGH FC +C+ H+ S CP C + L ++
Sbjct: 13 VCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTGYICP 72
Query: 109 KLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQ 168
K+ R + S L + L +S E+ ++ + LS K ++ + R ++
Sbjct: 73 NHQKRV-CRFCEE--SRLLLCVECLVSPEHMSHHEL-TIENALSHCKERLNRRS--RKLR 126
Query: 169 ILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDD-S 227
+ L L+ Q+ +L+ +Q L + E + A +D+ RA +LR L D
Sbjct: 127 KDIAELQRLKAQQEKKLQALQQWLGQL-EHMPAEAARILDISRA----VTQLRSLVIDLE 181
Query: 228 NTRKSWLSSIDKNSSGIITSS 248
T K ++ KN+ ++ S
Sbjct: 182 RTAKELDTNTLKNAGDLLNRS 202
>UNIPROTKB|F1PTU1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000011620 Uniprot:F1PTU1
Length = 252
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V + + + C IC +IK +T C H+FC CI+ H + +DCP CG +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGIQVHETNPLEM 68
Query: 105 FLLDKLLKK 113
LD L++
Sbjct: 69 LRLDNTLEE 77
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 33/124 (26%), Positives = 64/124 (51%)
Query: 374 HSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSW 433
HS + VS++ F+RD L + ++++D A+ C V+ + +++
Sbjct: 204 HS-DPVSAVSFNRDGSLITSGSYDGLVRIWD-------TANGQC--VKTLVDDENPPVAF 253
Query: 434 NKFSKNR--IASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSV--DFSRTEPSMLVSGSD 489
KFS N I SS+ + + +WD +++ +Y+ HE + + +FS T ++SGS+
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSE 313
Query: 490 DCKV 493
DCK+
Sbjct: 314 DCKI 317
>RGD|1304579 [details] [associations]
symbol:Trim5 "tripartite motif-containing 5" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0002218 "activation of innate immune response"
evidence=ISO] [GO:0002221 "pattern recognition receptor signaling
pathway" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008329 "pattern recognition receptor activity" evidence=ISO]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070206 "protein trimerization" evidence=IEA;ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1304579 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
EMBL:CH473956 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
OrthoDB:EOG4229JJ CTD:85363 KO:K10648 EMBL:AC113720 EMBL:BC078926
IPI:IPI00475551 RefSeq:NP_001014045.1 UniGene:Rn.12117 SMR:Q6AYT1
STRING:Q6AYT1 Ensembl:ENSRNOT00000023100 GeneID:308906
KEGG:rno:308906 UCSC:RGD:1304579 InParanoid:Q6AYT1 NextBio:659774
Genevestigator:Q6AYT1 Uniprot:Q6AYT1
Length = 511
Score = 106 (42.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR----NKSD--CPCCG-HYLTN 98
V L +++ CPIC+ ++ E CGHSFC CI + N+ + CP C YL
Sbjct: 6 VMNLKEEVTCPICLDLMVEPVSGDCGHSFCQACITLNYESSKCNQDEFICPVCRVSYLFK 65
Query: 99 NQLYPNFLLDKLLKKTSARQISKTASP 125
N L PN + ++++ + S P
Sbjct: 66 N-LRPNRHVANIVQRLKEFKSSPEEEP 91
Score = 55 (24.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 22/114 (19%), Positives = 56/114 (49%)
Query: 141 VKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDL---H-YIK 196
++E + +MS L E + + Q+ ++LD H L+ + L+ ++ + H +
Sbjct: 205 MQEKEDIMSSLEESENEYSQQSKLLG-DLILDVEHQLQCSATEMLQGVENTIKRSHTFSM 263
Query: 197 EDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWL--SSIDKNSSGI-ITS 247
+ + + ++RA D + L++L + + ++ W+ + ++ N+ I IT+
Sbjct: 264 RKPKTIPKEQRRVFRAPDLQGM-LQVLQEVTEAQRYWVQVTLVESNNPNIFITA 316
>UNIPROTKB|E1BJY5 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GeneTree:ENSGT00530000063064 CTD:54941 KO:K12170
OMA:RTRCGHV EMBL:DAAA02056451 IPI:IPI00717546 RefSeq:NP_001192788.1
UniGene:Bt.51849 ProteinModelPortal:E1BJY5
Ensembl:ENSBTAT00000004048 GeneID:519541 KEGG:bta:519541
NextBio:20872894 Uniprot:E1BJY5
Length = 232
Score = 111 (44.1 bits), Expect = 0.0010, P = 0.0010
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRN-KSDCPCCGHYL 96
C +C++++ T CGH FC CI T L+N K CP C YL
Sbjct: 37 CSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 79
>UNIPROTKB|F1SAL7 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063064
KO:K12170 OMA:RTRCGHV EMBL:CU019565 RefSeq:XP_003127936.2
Ensembl:ENSSSCT00000004129 GeneID:100517591 KEGG:ssc:100517591
Uniprot:F1SAL7
Length = 232
Score = 111 (44.1 bits), Expect = 0.0010, P = 0.0010
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRN-KSDCPCCGHYL 96
C +C++++ T CGH FC CI T L+N K CP C YL
Sbjct: 37 CSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 495 473 0.00099 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 225
No. of states in DFA: 619 (66 KB)
Total size of DFA: 295 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.86u 0.11s 49.97t Elapsed: 00:00:02
Total cpu time: 49.89u 0.11s 50.00t Elapsed: 00:00:02
Start: Fri May 10 15:21:44 2013 End: Fri May 10 15:21:46 2013
WARNINGS ISSUED: 1