BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048199
(495 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224131692|ref|XP_002321154.1| predicted protein [Populus trichocarpa]
gi|222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa]
Length = 672
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/493 (78%), Positives = 432/493 (87%), Gaps = 8/493 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+EVST +VPAVKP+ KPS++ T AA A +S +EL+KD LCPICMQ
Sbjct: 1 MEEVSTGAIVPAVKPEPKPSTS------TAAAVASPEPSSAPSAEEAELEKDFLCPICMQ 54
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLT CGHSFCYMCI THLRNK+DCPCC HYLT NQL+PNFLL KLLKK SARQ S
Sbjct: 55 IIKDAFLTVCGHSFCYMCITTHLRNKNDCPCCSHYLTTNQLFPNFLLQKLLKKASARQTS 114
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
K ASP+E+FRQ+LQQGC VS+K++D+LMSLL+E+KRKMEQEEAERNMQ+LLDFLH LRKQ
Sbjct: 115 KNASPIEHFRQSLQQGCEVSIKDLDTLMSLLAERKRKMEQEEAERNMQVLLDFLHYLRKQ 174
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E++TDL YIKEDI+AVE+HRI+LYRARDRYS+KLRMLGDD RK W S+IDKN
Sbjct: 175 KVDELNEVRTDLRYIKEDIDAVEKHRIELYRARDRYSMKLRMLGDDLTVRKPWPSTIDKN 234
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
SG++TSSLNARG ++ G++ KK DGKAQ +SHG QRKD+ GSD Q N SGLS V+K
Sbjct: 235 HSGVVTSSLNARGLTT-GNIPIKKMDGKAQVSSHGLQRKDTSGGSDPQ-YNHSGLSAVKK 292
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
KRVHAQFNDLQ+CYLQKRRQ+AN PH + E DKN+IHREGYNAGLADFQSVL TFT+YSR
Sbjct: 293 KRVHAQFNDLQDCYLQKRRQLANHPHNQSERDKNVIHREGYNAGLADFQSVLGTFTQYSR 352
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
LRVIAELRHGDIFHSANIVSSIEFDRDD+ FATAGVSRRIKVFDF+SVVNEPADVHCPVV
Sbjct: 353 LRVIAELRHGDIFHSANIVSSIEFDRDDEFFATAGVSRRIKVFDFSSVVNEPADVHCPVV 412
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNKF+KN+IASSDYEGIVTVWDVTT+QSVMEYEEHEKRAWSVDFSRTE
Sbjct: 413 EMSTRSKLSCLSWNKFTKNQIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTE 472
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 473 PSMLVSGSDDCKV 485
>gi|15225760|ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|2702280|gb|AAB91983.1| COP1 regulatory protein [Arabidopsis thaliana]
gi|95147316|gb|ABF57293.1| At2g32950 [Arabidopsis thaliana]
gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
Length = 675
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/495 (77%), Positives = 436/495 (88%), Gaps = 9/495 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAP--QETDAAAAYTAAASTSEVGVSELDKDMLCPIC 58
M+E+ST+PVVPAVKPD + SS E D + SE+G +LDKD+LCPIC
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHEND-----DGGSGGSEIGAPDLDKDLLCPIC 55
Query: 59 MQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQ 118
MQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR
Sbjct: 56 MQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARH 115
Query: 119 ISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLR 178
+SKTASPL+ FR+ALQ+GC VS+KE+D+L++LL+E+KRKMEQEEAERNMQILLDFLHCLR
Sbjct: 116 VSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLR 175
Query: 179 KQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSID 238
KQKVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W +
Sbjct: 176 KQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--E 233
Query: 239 KNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVV 298
KN G ++SL+ RGG+ G+ QNKK +GKAQ +SHG +KD+L+GSDSQ LNQS +S+
Sbjct: 234 KNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMA 293
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKR+HAQFNDLQECYLQKRRQ+A+QP++KQE+DK+++ REGY+ GLADFQSVLTTFTRY
Sbjct: 294 RKKRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRY 353
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCP 418
SRLRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD+ CP
Sbjct: 354 SRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCP 413
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
+VEM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS+MEYEEHEKRAWSVDFSR
Sbjct: 414 IVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSR 473
Query: 479 TEPSMLVSGSDDCKV 493
TEPSMLVSGSDDCKV
Sbjct: 474 TEPSMLVSGSDDCKV 488
>gi|297823085|ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
gi|297325264|gb|EFH55684.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
Length = 675
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/493 (77%), Positives = 435/493 (88%), Gaps = 5/493 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+E+ST+P+VPAVKPD + SS + SE+G +LDKD+LCPICMQ
Sbjct: 1 MEEISTDPLVPAVKPDPRTSSVGEGYNRNEND---DGGDGGSEIGAPDLDKDLLCPICMQ 57
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSARQ+S
Sbjct: 58 IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARQVS 117
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASPL+ FR+ALQ+GC VS+KE+D+L+SLL+E+KRKMEQEEAERNMQILLDFLHCLRKQ
Sbjct: 118 KTASPLDQFREALQRGCDVSIKEVDNLLSLLAERKRKMEQEEAERNMQILLDFLHCLRKQ 177
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W +KN
Sbjct: 178 KVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKN 235
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
SG ++SL+ RGG+ G+ QNKK +GKAQ +SHG +KD+L+GSDSQ LNQS +S+ RK
Sbjct: 236 QSGFNSNSLSVRGGNFLGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARK 295
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
KR+HAQFNDLQECYLQKRRQ+ +QP++KQE+DK+++ REGY+ GLADFQSVLTTFTRYSR
Sbjct: 296 KRIHAQFNDLQECYLQKRRQLVDQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSR 355
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
LRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD+ CP+V
Sbjct: 356 LRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIV 415
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS+MEYEEHEKRAWSVDFSRTE
Sbjct: 416 EMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTE 475
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 476 PSMLVSGSDDCKV 488
>gi|402685|gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
Length = 675
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/495 (76%), Positives = 434/495 (87%), Gaps = 9/495 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAP--QETDAAAAYTAAASTSEVGVSELDKDMLCPIC 58
M+E+ST+PVVPAVKPD + SS E D + SE+G +LDKD+LCPIC
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHEND-----DGGSGGSEIGAPDLDKDLLCPIC 55
Query: 59 MQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQ 118
MQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR
Sbjct: 56 MQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARH 115
Query: 119 ISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLR 178
+SKTASPL+ FR+ALQ+GC VS+KE+D+L++LL+E+KRKMEQEEAERNMQILLDFLHCLR
Sbjct: 116 VSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLR 175
Query: 179 KQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSID 238
KQKVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W +
Sbjct: 176 KQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--E 233
Query: 239 KNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVV 298
KN G ++SL+ RGG+ G+ QNKK +GKAQ +SHG +KD+L+GSDSQ LNQS +S+
Sbjct: 234 KNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSIA 293
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKR+HAQFNDLQECYLQKRRQ+A+QP++KQE+DK+++ REGY+ GLADFQSVLTTFTRY
Sbjct: 294 RKKRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRY 353
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCP 418
SRLRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+S VNEPAD+ CP
Sbjct: 354 SRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSFVNEPADMQCP 413
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
+VEM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS MEYEEHEKRAWSVDFSR
Sbjct: 414 IVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSRMEYEEHEKRAWSVDFSR 473
Query: 479 TEPSMLVSGSDDCKV 493
TEPSMLVSGSDDCKV
Sbjct: 474 TEPSMLVSGSDDCKV 488
>gi|356554527|ref|XP_003545597.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max]
Length = 675
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/495 (78%), Positives = 436/495 (88%), Gaps = 9/495 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+E+S P+VPAV +KP ++ A A + A+ T SE DKD LCPICMQ
Sbjct: 1 MEELSAGPLVPAV---VKPEASKGA--AVAADTSAAASGGTFPASTSEPDKDFLCPICMQ 55
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN L+PNFLLDKLLKKTSARQIS
Sbjct: 56 IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNTNLFPNFLLDKLLKKTSARQIS 115
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E+FRQALQ+GC VS+KE+D+L+SLL+EKKRKMEQEEAERNMQILLDFLHCLRKQ
Sbjct: 116 KTASPVEHFRQALQKGCDVSIKELDTLLSLLAEKKRKMEQEEAERNMQILLDFLHCLRKQ 175
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDELKE+QTDL +IKEDINAVE+HR+DLYRARDRYSVKLRML DDS RKSW SS+DKN
Sbjct: 176 KVDELKEVQTDLQFIKEDINAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSWHSSMDKN 234
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQSGLSVV 298
+SG+I+S LN RGG S+GS KK DGK+Q +SHGH QR+D++TGSDSQ +NQSGLS+V
Sbjct: 235 NSGLISSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGVQRRDAITGSDSQYINQSGLSLV 293
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKRVH QFNDLQECYLQKRR A++PH++Q D N+I REGY AGL DFQSVLTTFTRY
Sbjct: 294 RKKRVHTQFNDLQECYLQKRRHAADRPHSQQVRDINLISREGYTAGLEDFQSVLTTFTRY 353
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCP 418
SRLRVIAELRHGDIFHSANIVSSIEFD DD LFATAGVSRRIKVFDF++VVNEP D HCP
Sbjct: 354 SRLRVIAELRHGDIFHSANIVSSIEFDCDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCP 413
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVEM TRSKLSCLSWNK++KN+IASSDYEGIVTVWDVTT++S+MEYEEHEKRAWSVDFSR
Sbjct: 414 VVEMSTRSKLSCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSR 473
Query: 479 TEPSMLVSGSDDCKV 493
T+PSMLVSGSDDCKV
Sbjct: 474 TDPSMLVSGSDDCKV 488
>gi|255587080|ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223525812|gb|EEF28255.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 677
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/493 (77%), Positives = 436/493 (88%), Gaps = 3/493 (0%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+EVST +VPAVK ++P + ++ A ++ AAA+ E G+SEL+KD LCPICMQ
Sbjct: 1 MEEVSTGAIVPAVK--LEPRPSSSSVAVAAAVSSEPAAAAEEEAGLSELEKDFLCPICMQ 58
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHLRNKSDCPCC HYLT NQL+PNFLL KLLKK SARQ S
Sbjct: 59 IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCTHYLTTNQLFPNFLLQKLLKKASARQTS 118
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E+FR ALQQGC +S+KE+D+LMS+LSEKKRKMEQEEAERNMQILLDFLH LRKQ
Sbjct: 119 KTASPVEHFRHALQQGCEISIKELDTLMSMLSEKKRKMEQEEAERNMQILLDFLHYLRKQ 178
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E++TDL +IKEDI AVE+HRI+LY ARDRYS+KLRMLGDD N RK W +I+K+
Sbjct: 179 KVDELNEVRTDLQFIKEDIEAVEKHRIELYHARDRYSMKLRMLGDDPNARKPWSPTIEKS 238
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
+ G+I+++ N RGG G+L KK DGKAQ +SHG QRKDSL+GSDSQ N SGLSVVRK
Sbjct: 239 NGGVISNAFNVRGGMITGNLPTKKMDGKAQVSSHGLQRKDSLSGSDSQ-FNHSGLSVVRK 297
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
KRVHAQFNDLQECYLQKRRQMANQ H +Q+ DKN++HREGY+ GL DFQSVL+TFT+YSR
Sbjct: 298 KRVHAQFNDLQECYLQKRRQMANQLHNQQDKDKNVMHREGYSTGLLDFQSVLSTFTQYSR 357
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
LRVIAELRHGDIFHSANIVSSIEFDRDD+LFATAGVSRRIKVFDF++V+N+PADVHCPV
Sbjct: 358 LRVIAELRHGDIFHSANIVSSIEFDRDDELFATAGVSRRIKVFDFSTVLNDPADVHCPVE 417
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNK++KN+IASSDYEGIVTVWDVTT+QSVMEYEEHEKRAWSVDFSRTE
Sbjct: 418 EMSTRSKLSCLSWNKYAKNQIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTE 477
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 478 PSMLVSGSDDCKV 490
>gi|332656170|gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
Length = 677
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/497 (75%), Positives = 431/497 (86%), Gaps = 11/497 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAP---QETDAAAAYTAAASTSEVGVSELDKDMLCPI 57
M+E+ +P+VPAVKPD + SS P E D + E+G +LDKD+LCPI
Sbjct: 1 MEEIRKDPLVPAVKPDPRTSSIGEGPNHRHENDEGGS-----GGLEIGAPDLDKDLLCPI 55
Query: 58 CMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
CMQ+IK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR
Sbjct: 56 CMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSAR 115
Query: 118 QISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCL 177
+SKTASPL+ FR ALQ+GC VS+KE+D+L++LL+EKKRKMEQEEAERNMQILLDFLHCL
Sbjct: 116 HVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQILLDFLHCL 175
Query: 178 RKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSI 237
RKQK DEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W +
Sbjct: 176 RKQKADELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAW--PL 233
Query: 238 DKNSSGIITSSLNARGGSSAGSLQNKKG-DGKAQANSHGHQRKDSLTGSDSQCLNQSGLS 296
+K+ +G ++SL+ RGG+ +G+ QNKK +GKAQ +SHG +KD+ +GSDSQ LNQS +S
Sbjct: 234 EKSHTGFNSNSLSIRGGNPSGNFQNKKVVEGKAQGSSHGISKKDAQSGSDSQSLNQSSVS 293
Query: 297 VVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFT 356
+ RKKR+HAQFNDLQECYLQKRRQ+ +QPHT QESD +++ REGY+ GLADFQSVLTTFT
Sbjct: 294 MARKKRIHAQFNDLQECYLQKRRQLVDQPHTNQESDNSVVRREGYSHGLADFQSVLTTFT 353
Query: 357 RYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
RYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD+
Sbjct: 354 RYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQ 413
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CP+VEM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS+MEYEEHEKRAWSVDF
Sbjct: 414 CPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDF 473
Query: 477 SRTEPSMLVSGSDDCKV 493
SRTEPSMLVSGSDDCKV
Sbjct: 474 SRTEPSMLVSGSDDCKV 490
>gi|313667084|gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa subsp. chinensis]
Length = 676
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/496 (75%), Positives = 428/496 (86%), Gaps = 10/496 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAP---QETDAAAAYTAAASTSEVGVSELDKDMLCPI 57
M+E+ +P+VPAVKPD + SS P E D + E+G +LDKD+LCPI
Sbjct: 1 MEEIRKDPLVPAVKPDPRTSSIGEGPNRRHENDEGGS-----GGLEIGAPDLDKDLLCPI 55
Query: 58 CMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
CMQ+IK+AFLTACGHSFCYMCIITHL+NKSDCPCC +LTN QLYPNFLLDKLLKKTSAR
Sbjct: 56 CMQVIKDAFLTACGHSFCYMCIITHLKNKSDCPCCSQHLTNKQLYPNFLLDKLLKKTSAR 115
Query: 118 QISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCL 177
+SKTASPL+ FR ALQ+GC VS+KE+D+L++LL+EKKRKMEQEEAERNMQILLDFLHCL
Sbjct: 116 HVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQILLDFLHCL 175
Query: 178 RKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSI 237
RKQKVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W
Sbjct: 176 RKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAW--PP 233
Query: 238 DKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSV 297
+K+ +G ++SL+ RGG+ + QNKK +GKAQ +SHG +KD+ +GSDSQ LNQS +S+
Sbjct: 234 EKSHTGFNSNSLSIRGGNPPANFQNKKVEGKAQGSSHGISKKDAQSGSDSQSLNQSSVSM 293
Query: 298 VRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
RKKR+HAQF+DLQECYLQKRRQ+ +QPH+ QESD +++ REGY+ GLADFQSVLTTFTR
Sbjct: 294 ARKKRIHAQFSDLQECYLQKRRQLVDQPHSNQESDNSVVRREGYSYGLADFQSVLTTFTR 353
Query: 358 YSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHC 417
YSRLRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD+ C
Sbjct: 354 YSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQC 413
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
P+VEM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS+MEYEEHEKRAWSVDFS
Sbjct: 414 PIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFS 473
Query: 478 RTEPSMLVSGSDDCKV 493
RTEPSMLVSGSDDCKV
Sbjct: 474 RTEPSMLVSGSDDCKV 489
>gi|302633366|gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
Length = 677
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/497 (75%), Positives = 429/497 (86%), Gaps = 11/497 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAP---QETDAAAAYTAAASTSEVGVSELDKDMLCPI 57
M+E+ +P+VPAVKPD + SS E D + E+G +LDKD+LCPI
Sbjct: 1 MEEIRKDPLVPAVKPDPRTSSIGEGHNHRHENDEGGS-----GGLEIGAPDLDKDLLCPI 55
Query: 58 CMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
CMQ+IK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR
Sbjct: 56 CMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSAR 115
Query: 118 QISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCL 177
+SKTASPL+ FR ALQ+GC VS+KE+D+L++LL+EKKRKMEQEEAERNMQILLDFLHCL
Sbjct: 116 HVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQILLDFLHCL 175
Query: 178 RKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSI 237
RKQKVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W
Sbjct: 176 RKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAW--PP 233
Query: 238 DKNSSGIITSSLNARGGSSAGSLQNKKG-DGKAQANSHGHQRKDSLTGSDSQCLNQSGLS 296
+K+ +G ++SL+ RGG+ +G+ QNKK +GKAQ +SHG +KD+ +GSDSQ LNQS +S
Sbjct: 234 EKSHTGFNSNSLSIRGGNPSGNFQNKKVVEGKAQGSSHGISKKDAQSGSDSQSLNQSSVS 293
Query: 297 VVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFT 356
+ RKKR+HAQFNDLQECYLQKRRQ+ +QPH QESD +++ REGY+ GLADFQSVLTTFT
Sbjct: 294 MARKKRIHAQFNDLQECYLQKRRQLVDQPHANQESDNSVVRREGYSHGLADFQSVLTTFT 353
Query: 357 RYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
RYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD+
Sbjct: 354 RYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQ 413
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CP+VEM TRSKLSCLSWNK KN IASSDYEGIVTVWDVTT+QS+MEYEEHEKRAWSVDF
Sbjct: 414 CPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDF 473
Query: 477 SRTEPSMLVSGSDDCKV 493
SRTEPSMLVSGSDDCKV
Sbjct: 474 SRTEPSMLVSGSDDCKV 490
>gi|356501265|ref|XP_003519446.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max]
Length = 669
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/495 (76%), Positives = 428/495 (86%), Gaps = 15/495 (3%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+E+S P+VPAV +KP E A+ A+ T SE DKD LCPICMQ
Sbjct: 1 MEELSAGPLVPAV---VKP--------EPSKGASAAASGGTFPASTSEPDKDFLCPICMQ 49
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+ FLTACGHSFCYMCIITHLRNKSDCPCCG YLTN L+PN LLDKLLKKTSARQIS
Sbjct: 50 IIKDPFLTACGHSFCYMCIITHLRNKSDCPCCGDYLTNTNLFPNLLLDKLLKKTSARQIS 109
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E+FRQ LQ+G VS+KE+D+L+SLL+EKKRKMEQEEAERNMQILLDFLHCLRKQ
Sbjct: 110 KTASPVEHFRQVLQKGSDVSIKELDTLLSLLAEKKRKMEQEEAERNMQILLDFLHCLRKQ 169
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDELKE+QTDLH+IKEDINAVE+HR++LYRARDRYSVKL+ML D S RKSW SS+DKN
Sbjct: 170 KVDELKEVQTDLHFIKEDINAVEKHRMELYRARDRYSVKLQML-DGSGGRKSWHSSMDKN 228
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQSGLSVV 298
SSG+++S LN RGG S+GS KK DGK+ +SHGH QR++ +TGSDSQ +NQSGL++V
Sbjct: 229 SSGLLSSPLNLRGGLSSGS-HTKKNDGKSHISSHGHGIQRRNVITGSDSQYINQSGLALV 287
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKRVH QFNDLQECYLQKRR A++ H++QE D ++I REGY AGL DFQSVLTTFTRY
Sbjct: 288 RKKRVHTQFNDLQECYLQKRRHAADRSHSQQERDISLISREGYTAGLEDFQSVLTTFTRY 347
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCP 418
SRLRVIAELRHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKVFDF++VVNEP D HCP
Sbjct: 348 SRLRVIAELRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCP 407
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVEM TRSKLSCLSWNKF+KN+IASSDYEGIVTVWDVTT++S+MEYEEHEKRAWSVDFSR
Sbjct: 408 VVEMSTRSKLSCLSWNKFAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSR 467
Query: 479 TEPSMLVSGSDDCKV 493
T+PSMLVSGSDDCKV
Sbjct: 468 TDPSMLVSGSDDCKV 482
>gi|359483452|ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 687
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/502 (73%), Positives = 418/502 (83%), Gaps = 11/502 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTA---------PQETDAAAAYTAAASTSEVGVSELDK 51
M + S +VP VKP S+ A P+ A A +E GVSE+DK
Sbjct: 1 MGDSSMGALVPTVKPPEPAGSSSEAVTAPPPPPPPEPAPEEQAEVPAVEATETGVSEVDK 60
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLL 111
D+LCPICMQIIK+AFLTACGHSFCYMCI+THL NK+DCPCCGH+LT N L+PNFLL+K L
Sbjct: 61 DLLCPICMQIIKDAFLTACGHSFCYMCIVTHLNNKNDCPCCGHFLTTNHLFPNFLLNKFL 120
Query: 112 KKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILL 171
+KTSARQI+KTA+P E+ RQALQQGC VSVKE+DSLMSLL EK+RKMEQEEAE NMQILL
Sbjct: 121 RKTSARQIAKTATPFEHLRQALQQGCEVSVKELDSLMSLLVEKRRKMEQEEAETNMQILL 180
Query: 172 DFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRK 231
DFLHCLRKQK++EL EIQTDL Y+KEDINAVERHRIDLYR+R+RYSVKLRML DD K
Sbjct: 181 DFLHCLRKQKLEELNEIQTDLQYVKEDINAVERHRIDLYRSRERYSVKLRMLADDPIATK 240
Query: 232 SWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLN 291
+W S DK+SSGII+S+ + +G AGS QNKK D KAQ +SHG QRKD+ +GSDS +
Sbjct: 241 AWPSLTDKHSSGIISSAHSTQGRMGAGSSQNKKADVKAQVSSHGLQRKDAYSGSDSH-VT 299
Query: 292 QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSV 351
QSGL V RK+R+HAQFNDLQ+CYLQKRR Q H ++E D N REGY+AGL DFQSV
Sbjct: 300 QSGLVVARKRRLHAQFNDLQDCYLQKRRHWVRQQHKQEERDTN-SSREGYHAGLEDFQSV 358
Query: 352 LTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNE 411
LTTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVSRRIKVF+F+SVVNE
Sbjct: 359 LTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRIKVFEFSSVVNE 418
Query: 412 PADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRA 471
PADVHCPVVEM TRSKLSCLSWNK++KN IASSDYEGIVTVWDVTT+QSVMEYEEHEKRA
Sbjct: 419 PADVHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVTTRQSVMEYEEHEKRA 478
Query: 472 WSVDFSRTEPSMLVSGSDDCKV 493
WSVDFSRTEPSMLVSGSDDCKV
Sbjct: 479 WSVDFSRTEPSMLVSGSDDCKV 500
>gi|3121867|sp|P93471.1|COP1_PEA RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|1694900|emb|CAA70768.1| Cop1 protein [Pisum sativum]
gi|8574409|emb|CAB94801.1| COP1 regulatory protein [Pisum sativum]
Length = 672
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/495 (76%), Positives = 430/495 (86%), Gaps = 12/495 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+E S P+VPAV +KP + +T AA + + +S+LDKD LCPICMQ
Sbjct: 1 MEEHSVGPLVPAV---VKPEPSKNFSTDTTAAGTFLLVPT-----MSDLDKDFLCPICMQ 52
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN+ L+PNFLLDKLLKKTS RQIS
Sbjct: 53 IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQIS 112
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E+FRQA+Q+GC V++KE+D+L+ LL+EKKRKMEQEEAERNMQILLDFLHCLRKQ
Sbjct: 113 KTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQ 172
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML DDS RKS SS+D N
Sbjct: 173 KVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLN 231
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQSGLSVV 298
SSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D +TGSDSQ +NQSGL++V
Sbjct: 232 SSGLASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALV 290
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKRVH QFNDLQECYLQKRRQ A++PH +QE D N I REGY+ GL DFQSVLTTFTRY
Sbjct: 291 RKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRY 350
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCP 418
SRLRVIAE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKVFDF++VVNEP D HCP
Sbjct: 351 SRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCP 410
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVEM TRSKLSCLSWNK++KN+IASSDYEGIVTVW +TT++S+MEYEEHEKRAWSVDFSR
Sbjct: 411 VVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSR 470
Query: 479 TEPSMLVSGSDDCKV 493
T+PSMLVSGSDDCKV
Sbjct: 471 TDPSMLVSGSDDCKV 485
>gi|7688063|emb|CAB89693.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 675
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/501 (77%), Positives = 434/501 (86%), Gaps = 21/501 (4%)
Query: 1 MDEVSTEPVVPAV-KPD-MKPSSTDTAPQETDAAAAYTAAASTSEV-GVSELDKDMLCPI 57
M+E S P+VPAV KP+ K STDT TAA S V +S+LDKD LCPI
Sbjct: 1 MEEHSVGPLVPAVVKPEPSKNFSTDT-----------TAAGDVSPVPTMSDLDKDFLCPI 49
Query: 58 CMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
CMQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN+ L+PNFLLDKLLKKTS R
Sbjct: 50 CMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDR 109
Query: 118 QISKTASPLENFRQALQ---QGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFL 174
QISKTASP+E+FRQA+Q QGC V++KE+D+L+ LL+EKKRKMEQEEAERNMQILLDFL
Sbjct: 110 QISKTASPVEHFRQAVQKLKQGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFL 169
Query: 175 HCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWL 234
HCLRKQKVDELK++QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML DDS RKS
Sbjct: 170 HCLRKQKVDELKKVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRH 228
Query: 235 SSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQ 292
SS+D NSSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D +TGSDSQ +NQ
Sbjct: 229 SSMDLNSSGLASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQ 287
Query: 293 SGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVL 352
SGL++VRKKRVH QFNDLQECYLQKRRQ A++PH +QE D N I REGY+ GL DFQSVL
Sbjct: 288 SGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVL 347
Query: 353 TTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEP 412
TTFTRYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKVFDF++VVNEP
Sbjct: 348 TTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEP 407
Query: 413 ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAW 472
D HCPVVEM TRSKLSCLSWNK++KN+IASSDYEGIVTVWDVTT++S+MEYEEHEKRAW
Sbjct: 408 TDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAW 467
Query: 473 SVDFSRTEPSMLVSGSDDCKV 493
SVDFSRT+PSMLVSGSDDCKV
Sbjct: 468 SVDFSRTDPSMLVSGSDDCKV 488
>gi|225447155|ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Vitis vinifera]
gi|297739218|emb|CBI28869.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/493 (73%), Positives = 422/493 (85%), Gaps = 4/493 (0%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+EVST +VP VKP M PS T AP E +A A EVGVS +DKD LCPICMQ
Sbjct: 1 MEEVSTGALVPLVKPVMTPS-TSVAPTEATGSADEETA---EEVGVSNMDKDSLCPICMQ 56
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHL+NKSDCPCCG YLTNNQL+PN LLDKLLKKTSA+QIS
Sbjct: 57 IIKDAFLTACGHSFCYMCIITHLQNKSDCPCCGVYLTNNQLFPNRLLDKLLKKTSAQQIS 116
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E F +L+QGC VSVKE+D+L+S+L+EKKRKMEQ+EAERNM+IL++FL+ L+ Q
Sbjct: 117 KTASPVEQFHHSLEQGCEVSVKELDTLLSVLTEKKRKMEQDEAERNMKILMEFLNSLKMQ 176
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E Q DL Y+KEDIN VERHRI+LYR RDRYSVKLRM DD K S + K+
Sbjct: 177 KVDELNETQNDLQYVKEDINVVERHRIELYRVRDRYSVKLRMHVDDPMATKPRTSLVGKS 236
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
SSG+++SS +GG ++G+LQNK+ DG+ QA+S RKD+LTG DSQC+NQ G++VVRK
Sbjct: 237 SSGLVSSSRKIQGGMASGNLQNKQLDGRGQASSQSLHRKDALTGLDSQCINQPGVAVVRK 296
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
KR+H+QFNDLQ+CYLQKRRQ+ N+PH + E + N+IHREGY+AGLADFQSVLTTF++YSR
Sbjct: 297 KRIHSQFNDLQQCYLQKRRQLVNKPHKQDERNTNVIHREGYSAGLADFQSVLTTFSQYSR 356
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
L+VIAELRHGD+FHSANIVSSIEFD DD+LFATAGVSRRIKVFDF+SVVNE A++HCPVV
Sbjct: 357 LKVIAELRHGDLFHSANIVSSIEFDCDDELFATAGVSRRIKVFDFSSVVNERAEMHCPVV 416
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNK +KN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTE
Sbjct: 417 EMSTRSKLSCLSWNKCTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRTE 476
Query: 481 PSMLVSGSDDCKV 493
PS LVSGSDDCKV
Sbjct: 477 PSRLVSGSDDCKV 489
>gi|350537659|ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum]
gi|4090943|gb|AAC98912.1| COP1 homolog [Solanum lycopersicum]
Length = 677
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/494 (73%), Positives = 414/494 (83%), Gaps = 5/494 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M E S VVPAVK ++ D + + + V ELD+++LCPICMQ
Sbjct: 1 MVESSVGGVVPAVKGEVMRRMGD----KEEGGSVTLRDEEVGTVTEWELDRELLCPICMQ 56
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCI+THL NKSDCPCC HYLT +QLYPNFLLDKLLKKTSARQIS
Sbjct: 57 IIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKLLKKTSARQIS 116
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E FR +L+QG VS+KE+D+L+ +LSEKKRK+EQEEAERNMQILLDFL LRKQ
Sbjct: 117 KTASPVEQFRHSLEQGSEVSIKELDALLLMLSEKKRKLEQEEAERNMQILLDFLQMLRKQ 176
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E+Q DL YIKED+N+VERHRIDLYRARDRYS+KLRML DD +K W SS D+N
Sbjct: 177 KVDELNEVQHDLQYIKEDLNSVERHRIDLYRARDRYSMKLRMLADDPIGKKPWSSSTDRN 236
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKD-SLTGSDSQCLNQSGLSVVR 299
G+ ++S NA GG G+L KK D KAQ +S G QRKD S++ +SQ ++QSGL+VVR
Sbjct: 237 FGGLFSTSQNAPGGLPTGNLTFKKVDSKAQISSPGPQRKDTSISELNSQHMSQSGLAVVR 296
Query: 300 KKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYS 359
KKRV+AQFNDLQECYLQKRRQ+AN+ K+E D +++ REGY+ GLADFQSVL+TFTRYS
Sbjct: 297 KKRVNAQFNDLQECYLQKRRQLANKSRVKEEKDADVVQREGYSEGLADFQSVLSTFTRYS 356
Query: 360 RLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPV 419
RLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVSRRIKVFDF+SVVNEPAD HCPV
Sbjct: 357 RLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRIKVFDFSSVVNEPADAHCPV 416
Query: 420 VEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRT 479
VEM TRSKLSCLSWNK++KN IASSDY+GIVTVWDVTT+QSVMEYEEHEKRAWSVDFSRT
Sbjct: 417 VEMSTRSKLSCLSWNKYTKNHIASSDYDGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRT 476
Query: 480 EPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 477 EPSMLVSGSDDCKV 490
>gi|147825286|emb|CAN71084.1| hypothetical protein VITISV_028588 [Vitis vinifera]
Length = 676
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/493 (73%), Positives = 422/493 (85%), Gaps = 4/493 (0%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+EVST +VP+VKP M PS T AP E +A A EVGVS +DKD LCPICMQ
Sbjct: 1 MEEVSTGALVPSVKPVMTPS-TSVAPTEATGSADEETA---EEVGVSNMDKDSLCPICMQ 56
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHL+NKSDCPCCG YLTNNQL+PN LLDKLLKKTSA+QIS
Sbjct: 57 IIKDAFLTACGHSFCYMCIITHLQNKSDCPCCGVYLTNNQLFPNRLLDKLLKKTSAQQIS 116
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E F +L+QGC VSVKE+D+L+S+L+EKKRKMEQ+EAERNM+IL++FL+ L+ Q
Sbjct: 117 KTASPVEQFHHSLEQGCEVSVKELDTLLSVLTEKKRKMEQDEAERNMKILMEFLNSLKMQ 176
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDEL E Q DL Y+KEDIN VERHRI+LYR RDRYSVKLRM DD K S + K+
Sbjct: 177 KVDELNETQNDLQYVKEDINVVERHRIELYRVRDRYSVKLRMHVDDPMATKPRTSLVGKS 236
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
SSG+++SS +GG ++G+LQNK+ DG+ QA+S RKD+LTG DSQC+NQ G++VVRK
Sbjct: 237 SSGLVSSSRKIQGGMASGNLQNKQLDGRGQASSQSLHRKDALTGLDSQCINQPGVAVVRK 296
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
KR+H+QFNDLQ+CYLQKRRQ+ N+PH + E + N+IHREGY+AGLADFQSVLTTF++YSR
Sbjct: 297 KRIHSQFNDLQQCYLQKRRQLVNKPHKQDERNTNVIHREGYSAGLADFQSVLTTFSQYSR 356
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
L+VIAELRHGD+FHSANIVSSIEFD DD+LFATAGVSRRIKVFDF+SVVNE A+ HCPVV
Sbjct: 357 LKVIAELRHGDLFHSANIVSSIEFDCDDELFATAGVSRRIKVFDFSSVVNERAEXHCPVV 416
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNK +KN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTE
Sbjct: 417 EMSTRSKLSCLSWNKCTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRTE 476
Query: 481 PSMLVSGSDDCKV 493
PS LVSGSDDCKV
Sbjct: 477 PSRLVSGSDDCKV 489
>gi|11127996|gb|AAG31173.1| COP1 [Ipomoea nil]
Length = 677
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/452 (77%), Positives = 397/452 (87%), Gaps = 13/452 (2%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
ELD+++LCPICMQIIK+AFLT+CGHSFCYMCI+THL NKSDCPCC HYLT QLYPNFLL
Sbjct: 46 ELDRELLCPICMQIIKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLL 105
Query: 108 DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
DKLLKKTSA QISKTASP+E FR +++QG VS+KE+D L+++L+EKKRK+EQEEAERNM
Sbjct: 106 DKLLKKTSAHQISKTASPVEQFRHSIEQGREVSIKELDVLLTILAEKKRKLEQEEAERNM 165
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDS 227
QILL+FLH L+K+KVDEL E+Q DL YIKEDINAVERHRIDLYRARDRYS+KLRML DD
Sbjct: 166 QILLEFLHMLKKKKVDELNEVQNDLQYIKEDINAVERHRIDLYRARDRYSMKLRMLADDP 225
Query: 228 NTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKD------S 281
KS SS+D+N+ G+ SS +A GG ++G+L KK DG G QRKD S
Sbjct: 226 LGSKSRSSSVDRNTIGLFPSSRSAHGGLASGNLMYKKNDG-------GSQRKDVSVTELS 278
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGY 341
L GSDSQ +NQSGL+V+RKKRVHAQFNDLQECYLQKRRQ+ANQ K+E D+N+ REGY
Sbjct: 279 LNGSDSQHMNQSGLAVMRKKRVHAQFNDLQECYLQKRRQLANQLQNKEERDQNVTRREGY 338
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
+AGL++FQSVL+TFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDD+LFATAGVSRRIK
Sbjct: 339 SAGLSEFQSVLSTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDELFATAGVSRRIK 398
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VFDF+SVVNEPAD HCPVVEM TRSKLSCLSWNK++KN IASSDY+GIVTVWDVTT+QSV
Sbjct: 399 VFDFSSVVNEPADAHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYDGIVTVWDVTTRQSV 458
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
MEYEEHEKRAWSVDFSRT+PSMLVSGSDDCKV
Sbjct: 459 MEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKV 490
>gi|449450966|ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 675
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/498 (70%), Positives = 412/498 (82%), Gaps = 15/498 (3%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGV-----SELDKDMLC 55
MD+ ST +VPAVK T P + +A S +E+G ++LDKD LC
Sbjct: 1 MDDGSTGALVPAVK---------TEPVSSSISAPSIPDCSLAELGTVFEASAQLDKDFLC 51
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS 115
PICMQII++AFLTACGHSFCYMCIITHLRNKSDCPCC +LT++QL+PNFLLDKLLKKTS
Sbjct: 52 PICMQIIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTS 111
Query: 116 ARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLH 175
A QI+KTA+P+E FR ALQ+GC VS+KE+DSL+++LSEKKRKMEQEE+ RNM+IL DFLH
Sbjct: 112 AHQIAKTATPIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLH 171
Query: 176 CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLS 235
CLRKQKV EL E+Q DL +IKEDI+AVERHR++L RARDRYS+KLR GDD R+ WL+
Sbjct: 172 CLRKQKVSELNEVQIDLQFIKEDISAVERHRMELSRARDRYSMKLRKAGDDMKAREPWLT 231
Query: 236 SIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGL 295
+DK + G ++SLN G SAG+ QNKK D ++Q +++G +KDSL+G++ Q +N +GL
Sbjct: 232 LMDKRNDGPTSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLSGAEPQ-VNHTGL 290
Query: 296 SVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTF 355
SV RKKRVHAQFNDLQECYLQKRRQ+ NQ +QE DKN++HREGYN GL+DFQSVLTTF
Sbjct: 291 SVARKKRVHAQFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTF 350
Query: 356 TRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADV 415
TRYSRLRVIAELRHGD+FH+ NIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEP D
Sbjct: 351 TRYSRLRVIAELRHGDLFHNTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDA 410
Query: 416 HCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVD 475
HCP+VEM TR+KLSCLSW+K SKN IASSDYEGIVTVWDV QSVMEYEEHEKRAWSVD
Sbjct: 411 HCPIVEMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVD 470
Query: 476 FSRTEPSMLVSGSDDCKV 493
FSRTEPS LVSGSDDCKV
Sbjct: 471 FSRTEPSRLVSGSDDCKV 488
>gi|383931931|gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulgaris]
Length = 474
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/451 (77%), Positives = 393/451 (87%), Gaps = 2/451 (0%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
EV +E DKD++CPICMQ+IK+AFLTACGHSFCYMCIITHLRNKSDCPCCG +LTNNQLY
Sbjct: 1 EVSPTETDKDLMCPICMQMIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGRHLTNNQLY 60
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
PNFLLDKLLKK S RQ+S+ ASP+E FR+AL QGC VSVKE+D+LMSLL+EKKRKMEQEE
Sbjct: 61 PNFLLDKLLKKASVRQVSRNASPVEQFRRALLQGCEVSVKEVDTLMSLLAEKKRKMEQEE 120
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
AERNMQILLDFLHCLRKQKVDEL EIQ DL YIKEDI AVERHR++LYRARDRYSVKLRM
Sbjct: 121 AERNMQILLDFLHCLRKQKVDELSEIQGDLQYIKEDITAVERHRMELYRARDRYSVKLRM 180
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
L DD + K W S+ D++ G+ + S ++ GG +AG+ QNKK DGKAQ S G RKD+L
Sbjct: 181 LSDDPSP-KLWPSTADRSGGGVSSGSRSSLGGLAAGTFQNKKMDGKAQG-SQGPLRKDAL 238
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
G DSQ + QSGL+V+RKK +H QFNDLQECYLQKRRQ+ QP + E D + RE Y
Sbjct: 239 GGLDSQYIXQSGLAVMRKKXIHVQFNDLQECYLQKRRQLGGQPVRQDERDPXFMQREXYT 298
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKV 402
AGLA+FQSVL+TFTRYSRLRVIAEL+HGD FHSANIVSSIEFDRDD+LFATAGVSRRIKV
Sbjct: 299 AGLAEFQSVLSTFTRYSRLRVIAELKHGDPFHSANIVSSIEFDRDDELFATAGVSRRIKV 358
Query: 403 FDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
FDF+SVVNEPAD HCPVVE+ T SKLSCLSWNKF+KN+IASSDYEGIVTVWDVTT+QSVM
Sbjct: 359 FDFSSVVNEPADAHCPVVEISTLSKLSCLSWNKFTKNQIASSDYEGIVTVWDVTTRQSVM 418
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EYEEHEKRAWSVDFS TEPSMLVSGSDDCKV
Sbjct: 419 EYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 449
>gi|15029364|gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar]
Length = 662
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/498 (69%), Positives = 406/498 (81%), Gaps = 28/498 (5%)
Query: 1 MDEVSTEPVVPAVK--PDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPIC 58
M+E ST +VPAVK P + P +D T E G+SE+DKD+LCPIC
Sbjct: 1 MEECSTGALVPAVKVEPILSSIGGSVDPCSSDLGRL------TEEKGMSEVDKDLLCPIC 54
Query: 59 MQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQ 118
MQI+K+AFLTACGHSFCYMCIITHL NKSDCPCC L+ NQL+PNFLLDKLLKKTSA+Q
Sbjct: 55 MQIVKDAFLTACGHSFCYMCIITHLSNKSDCPCCAQSLSKNQLFPNFLLDKLLKKTSAQQ 114
Query: 119 ISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLR 178
ISK+A P+E+FRQALQQGC VS+KE+D+L++LL+EKKRKMEQEEAERNMQILLDFL+CLR
Sbjct: 115 ISKSAPPVEHFRQALQQGCEVSIKELDTLLALLAEKKRKMEQEEAERNMQILLDFLNCLR 174
Query: 179 KQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDD---SNTRKSWLS 235
KQKV EL E+Q+ L ++KEDI+ VER R++LYRARDRYSV+ RMLG D + R SW S
Sbjct: 175 KQKVQELNEVQSHLQFLKEDISVVERRRMELYRARDRYSVRQRMLGGDDSVNGARNSWPS 234
Query: 236 SIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGL 295
SID N TS+L RGG+S+ ++Q + G QR D+L+ SDSQ +NQSGL
Sbjct: 235 SIDNN-----TSALRVRGGTSSWNIQGR-----------GLQRNDALSASDSQYVNQSGL 278
Query: 296 SVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTF 355
+V RKKRVHA F++LQECYLQKRRQM NQP+++ E D+ +I REGY+ GLADFQSVLTT
Sbjct: 279 AVARKKRVHALFDELQECYLQKRRQM-NQPYSQLERDRTVIPREGYSTGLADFQSVLTTL 337
Query: 356 TRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADV 415
TRYSR+RVIAELRH D+FHSANIVSSIEFDRD +LFATAGVS+ IKVFDF+SVVN+PAD+
Sbjct: 338 TRYSRMRVIAELRHEDLFHSANIVSSIEFDRDYELFATAGVSKCIKVFDFSSVVNDPADM 397
Query: 416 HCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVD 475
H VVEMPTRSKLSCLSWNKF+KN IAS+DYEGIVTVWDV T+QSVMEYEEHEKRAWSVD
Sbjct: 398 HTAVVEMPTRSKLSCLSWNKFTKNHIASTDYEGIVTVWDVDTRQSVMEYEEHEKRAWSVD 457
Query: 476 FSRTEPSMLVSGSDDCKV 493
FS TEPSMLVSGSDDCKV
Sbjct: 458 FSCTEPSMLVSGSDDCKV 475
>gi|296090656|emb|CBI41056.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/417 (78%), Positives = 368/417 (88%), Gaps = 2/417 (0%)
Query: 77 MCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQG 136
MCI+THL NK+DCPCCGH+LT N L+PNFLL+K L+KTSARQI+KTA+P E+ RQALQQG
Sbjct: 1 MCIVTHLNNKNDCPCCGHFLTTNHLFPNFLLNKFLRKTSARQIAKTATPFEHLRQALQQG 60
Query: 137 CGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
C VSVKE+DSLMSLL EK+RKMEQEEAE NMQILLDFLHCLRKQK++EL EIQTDL Y+K
Sbjct: 61 CEVSVKELDSLMSLLVEKRRKMEQEEAETNMQILLDFLHCLRKQKLEELNEIQTDLQYVK 120
Query: 197 EDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSS 256
EDINAVERHRIDLYR+R+RYSVKLRML DD K+W S DK+SSGII+S+ + +G
Sbjct: 121 EDINAVERHRIDLYRSRERYSVKLRMLADDPIATKAWPSLTDKHSSGIISSAHSTQGRMG 180
Query: 257 AGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQ 316
AGS QNKK D KAQ +SHG QRKD+ +GSDS + QSGL V RK+R+HAQFNDLQ+CYLQ
Sbjct: 181 AGSSQNKKADVKAQVSSHGLQRKDAYSGSDSH-VTQSGLVVARKRRLHAQFNDLQDCYLQ 239
Query: 317 KRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSA 376
KRR Q H ++E D N REGY+AGL DFQSVLTTFTRYSRLRVIAELRHGD+FHSA
Sbjct: 240 KRRHWVRQQHKQEERDTN-SSREGYHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSA 298
Query: 377 NIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKF 436
NIVSSIEFDRDD+LFATAGVSRRIKVF+F+SVVNEPADVHCPVVEM TRSKLSCLSWNK+
Sbjct: 299 NIVSSIEFDRDDELFATAGVSRRIKVFEFSSVVNEPADVHCPVVEMSTRSKLSCLSWNKY 358
Query: 437 SKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+KN IASSDYEGIVTVWDVTT+QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 359 TKNHIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 415
>gi|226503711|ref|NP_001152482.1| ubiquitin ligase protein COP1 [Zea mays]
gi|195656705|gb|ACG47820.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/499 (68%), Positives = 400/499 (80%), Gaps = 16/499 (3%)
Query: 9 VVPAV-KPDMKPSSTDTA------------PQETDAAAAYTAAASTSEVGVSELDKDMLC 55
+VP+V KP+ PS DT+ P+E AA + +E G D+D+LC
Sbjct: 10 LVPSVPKPEPAPSG-DTSAAAAATTAALAMPEEAGMRAASASPQGPAEEGEGPADRDLLC 68
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS 115
PICM +IK+AFLTACGHSFCYMCI+THL NKSDCPCCGHYLT QLYPNFLLDK+LKK S
Sbjct: 69 PICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKIS 128
Query: 116 ARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLH 175
A+QI+KTASP++ FR ALQQG + VKE+DSLM+L++EKKR+MEQ+E+E NMQILL FLH
Sbjct: 129 AQQIAKTASPIDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLH 188
Query: 176 CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLS 235
CLRKQK++EL EIQTDL YIKEDI++VERHR +LYR ++RYS+KLRML D+ +K W S
Sbjct: 189 CLRKQKLEELNEIQTDLQYIKEDISSVERHRAELYRTKERYSMKLRMLLDEPTAQKMWPS 248
Query: 236 SIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSD-SQCLNQSG 294
SIDK S + +S GS G+LQNKK D KAQ + G QR+D+LT SD QSG
Sbjct: 249 SIDKASCRFLPNSRTPLSGSCPGTLQNKKLDLKAQVSHQGFQRRDALTSSDPPNSPIQSG 308
Query: 295 LSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTT 354
+ RK+RV AQFN+LQE YLQ+RR A Q ++E D ++REGY+AGL DFQSVLTT
Sbjct: 309 NVIARKRRVQAQFNELQEYYLQRRRTGA-QARRQEERDIVAMNREGYHAGLQDFQSVLTT 367
Query: 355 FTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD 414
FTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP+D
Sbjct: 368 FTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSD 427
Query: 415 VHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSV 474
VHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSV
Sbjct: 428 VHCPVVEMATRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSV 487
Query: 475 DFSRTEPSMLVSGSDDCKV 493
DFSRT+ SMLVSGSDDCKV
Sbjct: 488 DFSRTDSSMLVSGSDDCKV 506
>gi|413939110|gb|AFW73661.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/499 (67%), Positives = 399/499 (79%), Gaps = 16/499 (3%)
Query: 9 VVPAV-KPDMKPSSTDTA------------PQETDAAAAYTAAASTSEVGVSELDKDMLC 55
+VP+V KP+ PS DT+ P+E AA + +E G D+D+LC
Sbjct: 10 LVPSVPKPEPAPSG-DTSAAAAATTAALAMPEEAGMRAASASPQGPAEEGEGPADRDLLC 68
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS 115
PICM +IK+AFLTACGHSFCYMCI+THL NKSDCPCCGHYLT QLYPNFLLDK+LKK S
Sbjct: 69 PICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKIS 128
Query: 116 ARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLH 175
A+QI+KTASP++ FR ALQQG + VKE+DSLM+L++EKKR+MEQ+E+E NMQILL FLH
Sbjct: 129 AQQIAKTASPIDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLH 188
Query: 176 CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLS 235
CLRKQK++EL EIQTDL YIKEDI++VERHR +LYR ++RYS+KLRML D+ +K W S
Sbjct: 189 CLRKQKLEELNEIQTDLQYIKEDISSVERHRAELYRTKERYSMKLRMLLDEPTAQKMWPS 248
Query: 236 SIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSD-SQCLNQSG 294
IDK S + +S GS G+LQNKK D KAQ + G QR+D+LT SD QSG
Sbjct: 249 PIDKASCRFLPNSRTPLSGSCPGTLQNKKLDLKAQVSHQGFQRRDALTSSDPPNSPIQSG 308
Query: 295 LSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTT 354
+ RK+RV AQFN+LQE YLQ+RR A Q ++E D ++REGY+AGL DFQSVLTT
Sbjct: 309 NVIARKRRVQAQFNELQEYYLQRRRTGA-QARRQEERDIVAMNREGYHAGLQDFQSVLTT 367
Query: 355 FTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD 414
FTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP+D
Sbjct: 368 FTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSD 427
Query: 415 VHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSV 474
VHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSV
Sbjct: 428 VHCPVVEMATRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSV 487
Query: 475 DFSRTEPSMLVSGSDDCKV 493
DFSRT+ SMLVSGSDDCKV
Sbjct: 488 DFSRTDSSMLVSGSDDCKV 506
>gi|242066674|ref|XP_002454626.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
gi|241934457|gb|EES07602.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
Length = 725
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/470 (70%), Positives = 382/470 (81%), Gaps = 2/470 (0%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN 85
P+E AA + D+D+LCPICM +IK+AFLTACGHSFCYMCI+THL N
Sbjct: 41 PEEAGTRAASASPQGPPAEDEGPADRDLLCPICMALIKDAFLTACGHSFCYMCIVTHLSN 100
Query: 86 KSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEID 145
KSDCPCCGHYLT QLYPNFLLDK+LKK SARQI+KTASP++ FR ALQQG + VKE+D
Sbjct: 101 KSDCPCCGHYLTKAQLYPNFLLDKVLKKISARQIAKTASPIDQFRCALQQGNEMGVKELD 160
Query: 146 SLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERH 205
SLM+L++EKKR+MEQ+E+E NMQILL FLHCLRKQK++EL EIQTDL YIKEDI+AVERH
Sbjct: 161 SLMTLIAEKKRQMEQQESETNMQILLVFLHCLRKQKLEELNEIQTDLQYIKEDISAVERH 220
Query: 206 RIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKG 265
R +LYR ++RYS+KLRML D+ +K W S IDK S +S S G+LQNKK
Sbjct: 221 RKELYRTKERYSMKLRMLLDEPTAQKMWPSPIDKASCRFPPNSRTPLSASCPGTLQNKKL 280
Query: 266 DGKAQANSHGHQRKDSLTGSDSQCLN-QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQ 324
D KAQ + G QR+D+LT SD QSG + RK+RV AQFN+LQE YLQ+RR A Q
Sbjct: 281 DLKAQVSHQGFQRRDALTSSDPPNPPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGA-Q 339
Query: 325 PHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEF 384
++E D ++REGY+AGL DFQSVLTTFTRYSRLRVIAELRHGD+FHSANIVSSIEF
Sbjct: 340 ARRQEERDIVAMNREGYHAGLQDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEF 399
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
DRDD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM TRSKLSCLSWNK+SKN IASS
Sbjct: 400 DRDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNVIASS 459
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVL 494
DYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRT+PSMLVSGSDDCKV
Sbjct: 460 DYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVF 509
>gi|7592844|dbj|BAA94422.1| COP1 [Oryza sativa Japonica Group]
Length = 685
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/501 (66%), Positives = 393/501 (78%), Gaps = 14/501 (2%)
Query: 2 DEVSTEPVVPAVKPDMKPSSTDTAPQ--------ETDAAAAYTAAASTSEVGVSELDKDM 53
D +VP+V + S D + E DA A +A + G + D+D+
Sbjct: 3 DSTVAGALVPSVPKQEQAPSGDASTAALAVAGEGEEDAGARASAGGN----GEAAADRDL 58
Query: 54 LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKK 113
LCPICM +IK+AFLTACGHSFCYMCI+THL +KSDCPCCG+YLT QLYPNFLLDK+LKK
Sbjct: 59 LCPICMAVIKDAFLTACGHSFCYMCIVTHLSHKSDCPCCGNYLTKAQLYPNFLLDKVLKK 118
Query: 114 TSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDF 173
SARQI+KTASP++ FR ALQQG ++VKE+DSLM+L++EKKR MEQ+E+E NMQILL F
Sbjct: 119 MSARQIAKTASPIDQFRYALQQGNDMAVKELDSLMTLIAEKKRHMEQQESETNMQILLVF 178
Query: 174 LHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSW 233
LHCLRKQK++EL EIQTDL YIKEDI+AVERHR++LYR ++RYS+KLRML D+ K W
Sbjct: 179 LHCLRKQKLEELNEIQTDLQYIKEDISAVERHRLELYRTKERYSMKLRMLLDEPAASKMW 238
Query: 234 LSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLN-Q 292
S +DK S + +S S+ G LQNKK D K Q + G QR+D LT SD Q
Sbjct: 239 PSPMDKPSGLFLPNSRGPLSTSNPGGLQNKKLDLKGQISHQGFQRRDVLTCSDPPSAPIQ 298
Query: 293 SGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVL 352
SG + RK+RV AQFN+LQE YLQ+RR A Q +E D I++EGY+AGL DFQSVL
Sbjct: 299 SGNVIARKRRVQAQFNELQEYYLQRRRTGA-QSRRLEERDIVTINKEGYHAGLEDFQSVL 357
Query: 353 TTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEP 412
TTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP
Sbjct: 358 TTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEP 417
Query: 413 ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAW 472
+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAW
Sbjct: 418 SDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAW 477
Query: 473 SVDFSRTEPSMLVSGSDDCKV 493
SVDFSRTEPSMLVSGSDDCKV
Sbjct: 478 SVDFSRTEPSMLVSGSDDCKV 498
>gi|115448949|ref|NP_001048254.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|16151847|gb|AAL14875.1| copI [Oryza sativa]
gi|46805327|dbj|BAD16846.1| COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica
Group]
gi|113537785|dbj|BAF10168.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|215767107|dbj|BAG99335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|333943945|dbj|BAK26796.1| E3 ubiquitin-protein ligase [Oryza sativa Japonica Group]
Length = 685
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/467 (70%), Positives = 382/467 (81%), Gaps = 6/467 (1%)
Query: 28 ETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS 87
E DA A +A + G + D+D+LCPICM +IK+AFLTACGHSFCYMCI+THL +KS
Sbjct: 37 EEDAGARASAGGN----GEAAADRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSHKS 92
Query: 88 DCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSL 147
DCPCCG+YLT QLYPNFLLDK+LKK SARQI+KTASP++ FR ALQQG ++VKE+DSL
Sbjct: 93 DCPCCGNYLTKAQLYPNFLLDKVLKKMSARQIAKTASPIDQFRYALQQGNDMAVKELDSL 152
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
M+L++EKKR MEQ+E+E NMQILL FLHCLRKQK++EL EIQTDL YIKEDI+AVERHR+
Sbjct: 153 MTLIAEKKRHMEQQESETNMQILLVFLHCLRKQKLEELNEIQTDLQYIKEDISAVERHRL 212
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
+LYR ++RYS+KLRML D+ K W S +DK S +S S+ G LQNKK D
Sbjct: 213 ELYRTKERYSMKLRMLLDEPAASKMWPSPMDKPSGLFPPNSRGPLSTSNPGGLQNKKLDL 272
Query: 268 KAQANSHGHQRKDSLTGSDSQCLN-QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPH 326
K Q + G QR+D LT SD QSG + RK+RV AQFN+LQE YLQ+RR A Q
Sbjct: 273 KGQISHQGFQRRDVLTCSDPPSAPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGA-QSR 331
Query: 327 TKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDR 386
+E D I++EGY+AGL DFQSVLTTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDR
Sbjct: 332 RLEERDIVTINKEGYHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDR 391
Query: 387 DDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDY 446
DD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDY
Sbjct: 392 DDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDY 451
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 452 EGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 498
>gi|125583833|gb|EAZ24764.1| hypothetical protein OsJ_08537 [Oryza sativa Japonica Group]
Length = 685
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/467 (70%), Positives = 381/467 (81%), Gaps = 6/467 (1%)
Query: 28 ETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS 87
E DA A +A + G + D+D+LCPICM +IK+AFLTACG SFCYMCI+THL +KS
Sbjct: 37 EEDAGARASAGGN----GEAAADRDLLCPICMAVIKDAFLTACGQSFCYMCIVTHLSHKS 92
Query: 88 DCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSL 147
DCPCCG+YLT QLYPNFLLDK+LKK SARQI+KTASP++ FR ALQQG ++VKE+DSL
Sbjct: 93 DCPCCGNYLTKAQLYPNFLLDKVLKKMSARQIAKTASPIDQFRYALQQGNDMAVKELDSL 152
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
M+L++EKKR MEQ+E+E NMQILL FLHCLRKQK++EL EIQTDL YIKEDI+AVERHR+
Sbjct: 153 MTLIAEKKRHMEQQESETNMQILLVFLHCLRKQKLEELNEIQTDLQYIKEDISAVERHRL 212
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
+LYR ++RYS+KLRML D+ K W S +DK S +S S+ G LQNKK D
Sbjct: 213 ELYRTKERYSMKLRMLLDEPAASKMWPSPMDKPSGLFPPNSRGPLSTSNPGGLQNKKLDL 272
Query: 268 KAQANSHGHQRKDSLTGSDSQCLN-QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPH 326
K Q + G QR+D LT SD QSG + RK+RV AQFN+LQE YLQ+RR A Q
Sbjct: 273 KGQISHQGFQRRDVLTCSDPPSAPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGA-QSR 331
Query: 327 TKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDR 386
+E D I++EGY+AGL DFQSVLTTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDR
Sbjct: 332 RLEERDIVTINKEGYHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDR 391
Query: 387 DDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDY 446
DD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDY
Sbjct: 392 DDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDY 451
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 452 EGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 498
>gi|413924381|gb|AFW64313.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 489
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/490 (66%), Positives = 383/490 (78%), Gaps = 36/490 (7%)
Query: 9 VVPAV-KPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSE----LDKDMLCPICMQIIK 63
+VP+V KP+ PS ++ A T AAS S G +E D+D+LCPICM +IK
Sbjct: 10 LVPSVPKPETAPSGDNSTAALALPEEAGTRAASASPQGPAEEEGPADRDLLCPICMAVIK 69
Query: 64 EAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTA 123
+AFLTACGHSFCYMC++THL NKSDCPCCGHYLT QLYPNFLLDK+LKK SARQI+KTA
Sbjct: 70 DAFLTACGHSFCYMCVVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKISARQIAKTA 129
Query: 124 SPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVD 183
SP++ FR ALQQG + VKE+DSLM+L++EKKR+MEQ+E+E NMQILL FLHCLRKQK++
Sbjct: 130 SPVDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLHCLRKQKLE 189
Query: 184 ELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSG 243
EL EIQ+DL YIKEDI+AVERHR++LYR ++RYS+KLRML D+ +K W S +DK S
Sbjct: 190 ELNEIQSDLQYIKEDISAVERHRVELYRTKERYSMKLRMLLDEPTAQKMWPSPMDKASCR 249
Query: 244 IITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRV 303
+S GGS G+LQNKK D KAQ +RV
Sbjct: 250 FPPNSRTPLGGSCPGTLQNKKLDPKAQ------------------------------RRV 279
Query: 304 HAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRV 363
AQFN+LQE YLQ+RR A Q ++E + ++REGY+AGL DFQSVLTTFTRYSRLRV
Sbjct: 280 QAQFNELQEYYLQRRRTGA-QARRQEERETVAMNREGYHAGLQDFQSVLTTFTRYSRLRV 338
Query: 364 IAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMP 423
IAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM
Sbjct: 339 IAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMA 398
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTEPSM
Sbjct: 399 TRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTEPSM 458
Query: 484 LVSGSDDCKV 493
LVSGSDDCKV
Sbjct: 459 LVSGSDDCKV 468
>gi|226501498|ref|NP_001145835.1| uncharacterized protein LOC100279342 [Zea mays]
gi|219884613|gb|ACL52681.1| unknown [Zea mays]
gi|413924382|gb|AFW64314.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 655
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/490 (66%), Positives = 383/490 (78%), Gaps = 36/490 (7%)
Query: 9 VVPAV-KPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSE----LDKDMLCPICMQIIK 63
+VP+V KP+ PS ++ A T AAS S G +E D+D+LCPICM +IK
Sbjct: 10 LVPSVPKPETAPSGDNSTAALALPEEAGTRAASASPQGPAEEEGPADRDLLCPICMAVIK 69
Query: 64 EAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTA 123
+AFLTACGHSFCYMC++THL NKSDCPCCGHYLT QLYPNFLLDK+LKK SARQI+KTA
Sbjct: 70 DAFLTACGHSFCYMCVVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKISARQIAKTA 129
Query: 124 SPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVD 183
SP++ FR ALQQG + VKE+DSLM+L++EKKR+MEQ+E+E NMQILL FLHCLRKQK++
Sbjct: 130 SPVDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLHCLRKQKLE 189
Query: 184 ELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSG 243
EL EIQ+DL YIKEDI+AVERHR++LYR ++RYS+KLRML D+ +K W S +DK S
Sbjct: 190 ELNEIQSDLQYIKEDISAVERHRVELYRTKERYSMKLRMLLDEPTAQKMWPSPMDKASCR 249
Query: 244 IITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRV 303
+S GGS G+LQNKK D KAQ +RV
Sbjct: 250 FPPNSRTPLGGSCPGTLQNKKLDPKAQ------------------------------RRV 279
Query: 304 HAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRV 363
AQFN+LQE YLQ+RR A Q ++E + ++REGY+AGL DFQSVLTTFTRYSRLRV
Sbjct: 280 QAQFNELQEYYLQRRRTGA-QARRQEERETVAMNREGYHAGLQDFQSVLTTFTRYSRLRV 338
Query: 364 IAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMP 423
IAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM
Sbjct: 339 IAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMA 398
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTEPSM
Sbjct: 399 TRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTEPSM 458
Query: 484 LVSGSDDCKV 493
LVSGSDDCKV
Sbjct: 459 LVSGSDDCKV 468
>gi|326499049|dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 693
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/445 (69%), Positives = 369/445 (82%), Gaps = 4/445 (0%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D+D+LCPICM +IK+AFLTACGHSFCYMCI+THL +KSDCPCC +YLT QLYPNFLLDK
Sbjct: 65 DRDLLCPICMALIKDAFLTACGHSFCYMCIVTHLNHKSDCPCCANYLTKAQLYPNFLLDK 124
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQI 169
++KK SARQ++KTASP++ FR +QQG ++VKE+D LM+L++EKKR+MEQ+E+E NMQI
Sbjct: 125 VVKKMSARQVAKTASPIDQFRHVVQQGNDMTVKELDGLMTLIAEKKRQMEQQESETNMQI 184
Query: 170 LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNT 229
LL FLHCLRKQK++EL EIQTDL YIK+DI++VERHR+DLYR ++RYS++LRML D+
Sbjct: 185 LLVFLHCLRKQKLEELNEIQTDLQYIKDDISSVERHRLDLYRTKERYSMRLRMLLDEPAA 244
Query: 230 RKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQC 289
K W S +DK S +S SS G L N++ D +A A+ GHQR+D+L SD
Sbjct: 245 SKMWPSPMDKPSGPFGLNSRAPPSTSSPGGLNNRRFDLRAPASHQGHQRRDALASSDPPN 304
Query: 290 LN-QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADF 348
QS + RK+RV AQFN+LQE YLQ+RR A + ++ D ++REGY+ GL DF
Sbjct: 305 PPIQSSNVIARKRRVQAQFNELQEYYLQRRRTGA---QSHRQEDVVTMNREGYHEGLEDF 361
Query: 349 QSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASV 408
QSVLTTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++V
Sbjct: 362 QSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTV 421
Query: 409 VNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHE 468
VNEP+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHE
Sbjct: 422 VNEPSDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE 481
Query: 469 KRAWSVDFSRTEPSMLVSGSDDCKV 493
KRAWSVDFSRTEP MLVSGSDDCKV
Sbjct: 482 KRAWSVDFSRTEPKMLVSGSDDCKV 506
>gi|449513531|ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 670
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/493 (64%), Positives = 390/493 (79%), Gaps = 9/493 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M S +VP VK + PS+ D+ P ++ Y + S ++ +LDKDMLCPICMQ
Sbjct: 1 MGGGSIGALVPTVKTE--PSTLDSTPS---SSPLYRPSHSNTD----DLDKDMLCPICMQ 51
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLT CGHSFCYMCI+THLRNKSDCPCC H+L +N ++PN LLDKLLKKTSARQI
Sbjct: 52 IIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIK 111
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP +QALQ+GC +S+K+++ L++LL+EKKRKMEQEEAE NMQILL FL+CLRKQ
Sbjct: 112 KTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQ 171
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
K++EL EIQ DLHYIKEDI++VE+ R++LYR+++RYS K++ML DD+ + KS S IDK+
Sbjct: 172 KLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKH 231
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
+GI + + ++G S+G+ N + D K Q +S G RKD+ SD + QSGL+V K
Sbjct: 232 GNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANK 291
Query: 301 KRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
+RVH QFN+LQ+CYLQKRR Q + +++ D E YN L DFQSVLT+F RYSR
Sbjct: 292 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSR 351
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
LRVIAEL HGD+FHS NIVSSIEFDRDD+ FATAGVSR IKVF+F+SVVNEPADVH PVV
Sbjct: 352 LRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV 411
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
EM TRSKLSCLSWNK++K+ IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSR+E
Sbjct: 412 EMATRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE 471
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 472 PSMLVSGSDDCKV 484
>gi|449455449|ref|XP_004145465.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 663
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/452 (68%), Positives = 370/452 (81%)
Query: 42 SEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQL 101
S +LDKDMLCPICMQIIK+AFLT CGHSFCYMCI+THLRNKSDCPCC H+L +N +
Sbjct: 26 SHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSI 85
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
+PN LLDKLLKKTSARQI KTASP +QALQ+GC +S+K+++ L++LL+EKKRKMEQE
Sbjct: 86 FPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQE 145
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
EAE NMQILL FL+CLRKQK++EL EIQ DLHYIKEDI++VE+ R++LYR+++RYS K++
Sbjct: 146 EAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMK 205
Query: 222 MLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
ML DD+ + KS S IDK+ +GI + + ++G S+G+ N + D K Q +S G RKD+
Sbjct: 206 MLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDA 265
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGY 341
SD + QSGL+V K+RVH QFN+LQ+CYLQKRR Q + +++ D E Y
Sbjct: 266 YCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESY 325
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
N L DFQSVLT+F RYSRLRVIAEL HGD+FHS NIVSSIEFDRDD+ FATAGVSR IK
Sbjct: 326 NPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIK 385
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF+F+SVVNEPADVH PVVEM TRSKLSCLSWNK++K+ IASSDYEGIVTVWDV T+QSV
Sbjct: 386 VFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSV 445
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
MEYEEHEKRAWSVDFSR+EPSMLVSGSDDCKV
Sbjct: 446 MEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKV 477
>gi|224118164|ref|XP_002331573.1| predicted protein [Populus trichocarpa]
gi|222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 308/457 (67%), Positives = 351/457 (76%), Gaps = 58/457 (12%)
Query: 37 AAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL 96
A S + ELDKD+LCPICMQIIK+AFLT+CGHSFCY+CI THLRNK+DCPCC HYL
Sbjct: 18 ATTSKMQPPTEELDKDILCPICMQIIKDAFLTSCGHSFCYLCITTHLRNKNDCPCCSHYL 77
Query: 97 TNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKR 156
TNN ++PNFLL+KLL++T ARQ +K ASP E+ RQALQQGC VSVKE+D L++LL+EKKR
Sbjct: 78 TNNHIFPNFLLNKLLERTYARQAAKNASPYEHLRQALQQGCEVSVKELDGLLTLLAEKKR 137
Query: 157 KMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRY 216
KMEQEEAERNM+ILLDFL CLRKQK+DEL EIQTDL YIKEDINAVER RI+L RA+DR
Sbjct: 138 KMEQEEAERNMRILLDFLCCLRKQKLDELNEIQTDLQYIKEDINAVERQRIELCRAKDRC 197
Query: 217 SVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH 276
S+KLRM DD N S +T S G++ +KK
Sbjct: 198 SLKLRMFADDPN-------------SQFVTQS---------GTVASKK------------ 223
Query: 277 QRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNII 336
K AQFNDLQECYLQKRR Q + ++E D +I+
Sbjct: 224 ------------------------KWAQAQFNDLQECYLQKRRNWVRQAYKEEEKDTDIM 259
Query: 337 HREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGV 396
+REGYN GL DFQSVLT FTRYSRLR +AELRHGD+FHSANIVSSIEFDRDD+LFATAGV
Sbjct: 260 NREGYNQGLEDFQSVLTNFTRYSRLRAVAELRHGDLFHSANIVSSIEFDRDDELFATAGV 319
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
SRRIK+F+F+SV+NEPADVHCPVVEM TRSKLSCLSWNK++KN IASSDYEGIVTVWDVT
Sbjct: 320 SRRIKIFEFSSVMNEPADVHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVT 379
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T+QS+MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 380 TRQSIMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 416
>gi|357137921|ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Brachypodium
distachyon]
Length = 670
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/441 (68%), Positives = 357/441 (80%), Gaps = 31/441 (7%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLK 112
+LCPICM +IK+AFLTACGHSFCYMCI+THL +KSDCPCCG+YLT QLYPNFLLDK++K
Sbjct: 74 LLCPICMGVIKDAFLTACGHSFCYMCIVTHLGHKSDCPCCGNYLTKAQLYPNFLLDKVVK 133
Query: 113 KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLD 172
K SARQI+KTASP++ FR +QQG ++VKE+DSLM+L++EKKR+MEQ+E+E NMQILL
Sbjct: 134 KMSARQIAKTASPVDQFRHVVQQGNDMTVKELDSLMTLIAEKKRQMEQQESETNMQILLV 193
Query: 173 FLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKS 232
FLHCLRKQK++EL EIQTDL YIK+DI++VERHR+DLYR ++RYS+KLRML D+ K
Sbjct: 194 FLHCLRKQKLEELNEIQTDLQYIKDDISSVERHRLDLYRTKERYSMKLRMLLDEPAASKM 253
Query: 233 WLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQ 292
W S DK SS ++S SS G LQN++ D + HQR
Sbjct: 254 WSSPTDKPSSLFASNSRAPLSASSQGGLQNRRLDLR-------HQR-------------- 292
Query: 293 SGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVL 352
RV AQFN+LQE YLQ+RR A Q ++E D ++++EGY+AGL DFQSVL
Sbjct: 293 ---------RVQAQFNELQEYYLQRRRNGA-QSRRQEERDTVMMNKEGYHAGLDDFQSVL 342
Query: 353 TTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEP 412
TTFTRYSRLRVIAELRHGD+FHS NIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP
Sbjct: 343 TTFTRYSRLRVIAELRHGDLFHSPNIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEP 402
Query: 413 ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAW 472
+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAW
Sbjct: 403 SDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAW 462
Query: 473 SVDFSRTEPSMLVSGSDDCKV 493
SVDFSRTEPSMLVSGSDDCKV
Sbjct: 463 SVDFSRTEPSMLVSGSDDCKV 483
>gi|46805328|dbj|BAD16847.1| putative COP1, constitutive photomorphogenesis 1 [Oryza sativa
Japonica Group]
Length = 604
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 301/418 (72%), Positives = 347/418 (83%), Gaps = 2/418 (0%)
Query: 77 MCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQG 136
MCI+THL +KSDCPCCG+YLT QLYPNFLLDK+LKK SARQI+KTASP++ FR ALQQG
Sbjct: 1 MCIVTHLSHKSDCPCCGNYLTKAQLYPNFLLDKVLKKMSARQIAKTASPIDQFRYALQQG 60
Query: 137 CGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
++VKE+DSLM+L++EKKR MEQ+E+E NMQILL FLHCLRKQK++EL EIQTDL YIK
Sbjct: 61 NDMAVKELDSLMTLIAEKKRHMEQQESETNMQILLVFLHCLRKQKLEELNEIQTDLQYIK 120
Query: 197 EDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSS 256
EDI+AVERHR++LYR ++RYS+KLRML D+ K W S +DK S +S S+
Sbjct: 121 EDISAVERHRLELYRTKERYSMKLRMLLDEPAASKMWPSPMDKPSGLFPPNSRGPLSTSN 180
Query: 257 AGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLN-QSGLSVVRKKRVHAQFNDLQECYL 315
G LQNKK D K Q + G QR+D LT SD QSG + RK+RV AQFN+LQE YL
Sbjct: 181 PGGLQNKKLDLKGQISHQGFQRRDVLTCSDPPSAPIQSGNVIARKRRVQAQFNELQEYYL 240
Query: 316 QKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHS 375
Q+RR A Q +E D I++EGY+AGL DFQSVLTTFTRYSRLRVIAELRHGD+FHS
Sbjct: 241 QRRRTGA-QSRRLEERDIVTINKEGYHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHS 299
Query: 376 ANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNK 435
ANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM TRSKLSCLSWNK
Sbjct: 300 ANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNK 359
Query: 436 FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 360 YSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 417
>gi|7688065|emb|CAB89694.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 968
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 310/390 (79%), Positives = 349/390 (89%), Gaps = 4/390 (1%)
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
F LLKKTS RQISKTASP+E+FRQA+Q+GC V++KE+D+L+ LL+EKKRKMEQEEAE
Sbjct: 395 FDFSALLKKTSDRQISKTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAE 454
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLG 224
RNMQILLDFLHCLRKQKVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML
Sbjct: 455 RNMQILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML- 513
Query: 225 DDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSL 282
DDS RKS SS+D NSSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D +
Sbjct: 514 DDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPI 572
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
TGSDSQ +NQSGL++VRKKRVH QFNDLQECYLQKRRQ A++PH +QE D N I REGY+
Sbjct: 573 TGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYS 632
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKV 402
GL DFQSVLTTFTRYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKV
Sbjct: 633 CGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKV 692
Query: 403 FDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
FDF++VVNEP D HCPVVEM TRSKLSCLSWNK++KN+IASSDYEGIVTVWDVTT++S+M
Sbjct: 693 FDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLM 752
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
EYEEHEKRAWSVDFSRT+PSMLVSGSDDCK
Sbjct: 753 EYEEHEKRAWSVDFSRTDPSMLVSGSDDCK 782
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 312/419 (74%), Positives = 356/419 (84%), Gaps = 18/419 (4%)
Query: 1 MDEVSTEPVVPAV-KPD-MKPSSTDTAPQETDAAAAYTAAASTSEV-GVSELDKDMLCPI 57
M+E S P+VPAV KP+ K STDT TAA S V +S+LDKD LCPI
Sbjct: 1 MEEHSVGPLVPAVVKPEPSKNFSTDT-----------TAAGDVSPVPTMSDLDKDFLCPI 49
Query: 58 CMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
CMQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN+ L+PNFLLDKLLKKTS R
Sbjct: 50 CMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDR 109
Query: 118 QISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCL 177
QISKTASP+E+FRQA+Q+GC V++KE+D+L+ LL+EKKRKMEQEEAERNMQILLDFLHCL
Sbjct: 110 QISKTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCL 169
Query: 178 RKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSI 237
RKQKVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML DDS RKS SS+
Sbjct: 170 RKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSM 228
Query: 238 DKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQSGL 295
D NSSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D +TGSDSQ +NQSGL
Sbjct: 229 DLNSSGLASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGL 287
Query: 296 SVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTF 355
++VRKKRVH QFNDLQECYLQKRRQ A++PH +QE D N I REGY+ GL DFQSVLTTF
Sbjct: 288 ALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTF 347
Query: 356 TRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD 414
TRYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKVFDF++++ + +D
Sbjct: 348 TRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSALLKKTSD 406
>gi|8574407|emb|CAB94800.1| COP1 regulatory protein [Pisum sativum]
Length = 970
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 309/391 (79%), Positives = 349/391 (89%), Gaps = 4/391 (1%)
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
F LLKKTS RQISKTASP+E+FRQA+Q+GC V++KE+D+L+ LL+EKKRKMEQEEAE
Sbjct: 395 FDFSALLKKTSDRQISKTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAE 454
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLG 224
RNMQILLDFLHCLRKQKVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML
Sbjct: 455 RNMQILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML- 513
Query: 225 DDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSL 282
DDS RKS SS+D NSSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D +
Sbjct: 514 DDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPI 572
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
TGSDSQ +NQSGL++VRKKRVH QFNDLQECYLQKRRQ A++PH +QE D N I REGY+
Sbjct: 573 TGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYS 632
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKV 402
GL DFQSVLTTFTRYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKV
Sbjct: 633 CGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKV 692
Query: 403 FDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
FDF++VVNEP D HCPVVEM TRSKLSCLSWNK++KN+IASSDYEGIVTVW +TT++S+M
Sbjct: 693 FDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLM 752
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EYEEHEKRAWSVDFSRT+PSMLVSGSDDCKV
Sbjct: 753 EYEEHEKRAWSVDFSRTDPSMLVSGSDDCKV 783
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 305/416 (73%), Positives = 353/416 (84%), Gaps = 12/416 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
M+E S P+VPAV +KP + +T AA + + +S+LDKD LCPICMQ
Sbjct: 1 MEEHSVGPLVPAV---VKPEPSKNFSTDTTAAGTFLLVPT-----MSDLDKDFLCPICMQ 52
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
IIK+AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN+ L+PNFLLDKLLKKTS RQIS
Sbjct: 53 IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQIS 112
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
KTASP+E+FRQA+Q+GC V++KE+D+L+ LL+EKKRKMEQEEAERNMQILLDFLHCLRKQ
Sbjct: 113 KTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQ 172
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
KVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML DDS RKS SS+D N
Sbjct: 173 KVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLN 231
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQSGLSVV 298
SSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D +TGSDSQ +NQSGL++V
Sbjct: 232 SSGLASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALV 290
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKRVH QFNDLQECYLQKRRQ A++PH +QE D N I REGY+ GL DFQSVLTTFTRY
Sbjct: 291 RKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRY 350
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD 414
SRLRVIAE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKVFDF++++ + +D
Sbjct: 351 SRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSALLKKTSD 406
>gi|110742039|dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
Length = 391
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/382 (73%), Positives = 329/382 (86%), Gaps = 9/382 (2%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAP--QETDAAAAYTAAASTSEVGVSELDKDMLCPIC 58
M+E+ST+PVVPAVKPD + SS E D + SE+G +LDKD+LCPIC
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHEND-----DGGSGGSEIGAPDLDKDLLCPIC 55
Query: 59 MQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQ 118
MQIIK+AFLTACGHSFCYMCIITHLRNKSDCPCC +LTNNQLYPNFLLDKLLKKTSAR
Sbjct: 56 MQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARH 115
Query: 119 ISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLR 178
+SKTASPL+ FR+ALQ+GC VS+KE+D+L++LL+E+KRKMEQEEAERNMQILLDFLHCLR
Sbjct: 116 VSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLR 175
Query: 179 KQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSID 238
KQKVDEL E+QTDL YIKEDINAVERHRIDLYRARDRYSVKLRMLGDD +TR +W +
Sbjct: 176 KQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--E 233
Query: 239 KNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVV 298
KN G ++SL+ RGG+ G+ QNKK +GKAQ +SHG +KD+L+GSDSQ LNQS +S+
Sbjct: 234 KNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMA 293
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
RKKR+HAQFNDLQECYLQKRRQ+A+QP++KQE+DK+++ REGY+ GLADFQSVLTTFTRY
Sbjct: 294 RKKRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRY 353
Query: 359 SRLRVIAELRHGDIFHSANIVS 380
SRLRVIAE+RHGDIFHSANIVS
Sbjct: 354 SRLRVIAEIRHGDIFHSANIVS 375
>gi|218191653|gb|EEC74080.1| hypothetical protein OsI_09100 [Oryza sativa Indica Group]
Length = 636
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 297/450 (66%), Positives = 345/450 (76%), Gaps = 16/450 (3%)
Query: 59 MQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF------------- 105
M +IK+AFLTACGHSFCYMCI+THL + P P
Sbjct: 1 MAVIKDAFLTACGHSFCYMCIVTHLSPQERLPLLRQLPHQGAALPQLPPRQESPAVDSIS 60
Query: 106 -LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
+ +LKK SARQI+KTASP++ FR ALQQG ++VKE+DSLM+L++EKKR MEQ+E+E
Sbjct: 61 SMSALVLKKMSARQIAKTASPIDQFRYALQQGNDMAVKELDSLMTLIAEKKRHMEQQESE 120
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLG 224
NMQILL FLHCLRKQK++EL EIQTDL YIKEDI+AVERHR++LYR ++RYS+KLRML
Sbjct: 121 TNMQILLVFLHCLRKQKLEELNEIQTDLQYIKEDISAVERHRLELYRTKERYSMKLRMLL 180
Query: 225 DDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTG 284
D+ K W S +DK S +S S+ G LQNKK D K Q + G QR+D LT
Sbjct: 181 DEPAASKMWPSPMDKPSGLFPPNSRGPLSTSNPGGLQNKKLDLKGQISHQGFQRRDVLTC 240
Query: 285 SDSQCLN-QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNA 343
SD QSG + RK+RV AQFN+LQE YLQ+RR A Q +E D I++EGY+A
Sbjct: 241 SDPPSAPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGA-QSRRLEERDIVTINKEGYHA 299
Query: 344 GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
GL DFQSVLTTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RIKVF
Sbjct: 300 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVF 359
Query: 404 DFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVME 463
+F++VVNEP+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QSVME
Sbjct: 360 EFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVME 419
Query: 464 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 420 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 449
>gi|168037507|ref|XP_001771245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677486|gb|EDQ63956.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 292/499 (58%), Positives = 352/499 (70%), Gaps = 35/499 (7%)
Query: 5 STEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKE 64
S P VP+V + T + E + Y A +T LDKD LCPIC+Q +K+
Sbjct: 11 SAGPHVPSVAEVKQEPRTGSWSSEDNK---YEVAMATKPA----LDKDFLCPICIQTMKD 63
Query: 65 AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTAS 124
AFLTACGHSFCY CI+THL NKS+CPCCG YLTNNQL+PNFLL+KLL K SA + AS
Sbjct: 64 AFLTACGHSFCYTCIMTHLSNKSNCPCCGLYLTNNQLFPNFLLNKLLGKASASHLVSNAS 123
Query: 125 PLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDE 184
P EN R ALQQG + VKE+DSLM LLSEKKRK EQEEAE NM+ILL+FLH R+QK +E
Sbjct: 124 PAENLRLALQQGVDLPVKELDSLMRLLSEKKRKAEQEEAETNMEILLEFLHRSRQQKQEE 183
Query: 185 LKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTR-KSWLSSIDKNSSG 243
L +Q DL ++KEDI VE+ R DL RA+++Y++K+RM+GD +T L++ +K S
Sbjct: 184 LSLLQGDLQFLKEDIITVEKQRQDLLRAKEKYALKIRMIGDGPSTSMPDTLAACEKTSKS 243
Query: 244 IITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRV 303
+TS G S + D + A S + +++ +K+RV
Sbjct: 244 GVTSQKRGGQGGGGVSSGKNQLDSQGLAPS------------------PAVMTMAKKRRV 285
Query: 304 HAQFNDLQECYLQKRRQMANQPHTKQESDKNII------HREG---YNAGLADFQSVLTT 354
AQF DLQE YLQ+RR++A KQ ++ I+ H G Y +GL DFQSVLT
Sbjct: 286 VAQFEDLQEAYLQRRRKVAQVQRQKQNVNEAIVRKDEEVHSAGSDRYCSGLNDFQSVLTA 345
Query: 355 FTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD 414
FTRYSRLRVIAELRHGD+FHS+NIVSSIEFDRDDQLFATAGVSRRIKVF+FA+VVNE AD
Sbjct: 346 FTRYSRLRVIAELRHGDLFHSSNIVSSIEFDRDDQLFATAGVSRRIKVFEFATVVNELAD 405
Query: 415 VHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSV 474
VHCPVVEM TRSKLSCLSWNK+ + IASSDYEGI+TVWDV T QS+MEYEEHEKRAWSV
Sbjct: 406 VHCPVVEMSTRSKLSCLSWNKYINSHIASSDYEGIITVWDVNTHQSIMEYEEHEKRAWSV 465
Query: 475 DFSRTEPSMLVSGSDDCKV 493
DFSRT+P+MLVSGSDD KV
Sbjct: 466 DFSRTDPTMLVSGSDDGKV 484
>gi|383210359|dbj|BAM08276.1| constitutive photomorphogenic 1 [Malus x domestica]
Length = 646
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 284/487 (58%), Positives = 349/487 (71%), Gaps = 39/487 (8%)
Query: 9 VVPAVKPD-MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFL 67
+VP VK + + S+ +TAP + E DKDM CPICMQII++A L
Sbjct: 10 LVPTVKSEYFQDSAAETAPFD------------------DEPDKDMKCPICMQIIRDACL 51
Query: 68 TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLE 127
TACGHSFC++CI THLR KSDCPCC LT ++PNFLLDKLLK S+ A E
Sbjct: 52 TACGHSFCHVCISTHLRIKSDCPCCASSLTPASIFPNFLLDKLLKNVLD---SRMAKNFE 108
Query: 128 NFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKE 187
+ L +GC +S+KE+D L+SLL EK+RKME +EAE +M I+L FLHCLR+QK+ EL E
Sbjct: 109 LLSRKLNKGCEISIKELDGLLSLLEEKRRKMELQEAENSMDIMLSFLHCLRRQKLQELNE 168
Query: 188 IQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITS 247
++ DL YIKEDI AVERHR++L S KLRML D++ +GI S
Sbjct: 169 LEADLRYIKEDITAVERHRLELCSWEQERSAKLRMLVPG-----------DQHGNGIACS 217
Query: 248 SLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSG-LSVVRKKRVHAQ 306
+ + S+ +LQNK+ D Q++S Q KD+ S+ QC+ G LSV RK+RVH+Q
Sbjct: 218 TQYVQDRMSSFNLQNKRADVNGQSSSKLLQLKDAYGRSEMQCVTTRGVLSVARKRRVHSQ 277
Query: 307 FNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAE 366
FNDLQ+CYLQKRR +QE D N + EGYN GL DFQSVL +FT+YSRLRV+AE
Sbjct: 278 FNDLQDCYLQKRRNW-----NRQEEDTNAMDIEGYNPGLEDFQSVLASFTQYSRLRVVAE 332
Query: 367 LRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS 426
L HGD+FHSANIVSSIEFDRD++LFATAGVSR IKVF+F+SVVNEP D+HCP+VE+ +RS
Sbjct: 333 LSHGDLFHSANIVSSIEFDRDEELFATAGVSRCIKVFEFSSVVNEPTDIHCPIVEISSRS 392
Query: 427 KLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVS 486
KLSCLSWNK+++N IASSDYEG+VTVWDV T QS+MEYEEHEKRAWSVDFS T+PSMLVS
Sbjct: 393 KLSCLSWNKYTRNHIASSDYEGVVTVWDVNTCQSMMEYEEHEKRAWSVDFSCTDPSMLVS 452
Query: 487 GSDDCKV 493
GSDDCKV
Sbjct: 453 GSDDCKV 459
>gi|383209880|dbj|BAM08275.1| constitutive photomorphogenic 1 [Malus x domestica]
Length = 646
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 284/487 (58%), Positives = 349/487 (71%), Gaps = 39/487 (8%)
Query: 9 VVPAVKPD-MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFL 67
+VP VK + + S+ +TAP + E DKDM CPICMQII++A L
Sbjct: 10 LVPTVKSEYFQDSAAETAPFD------------------DEPDKDMKCPICMQIIRDACL 51
Query: 68 TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLE 127
TACGHSFC++CI THLR KSDCPCC LT ++PNFLLDKLLK S+ A E
Sbjct: 52 TACGHSFCHVCISTHLRIKSDCPCCASSLTPASIFPNFLLDKLLKNVLD---SRMAKNFE 108
Query: 128 NFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKE 187
+ L +GC +S+KE+D L+SLL EK+RKME +EAE +M I+L FLHCLR+QK+ EL E
Sbjct: 109 LLSRKLNKGCEISIKELDGLLSLLEEKRRKMELQEAENSMDIMLSFLHCLRRQKLQELNE 168
Query: 188 IQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITS 247
++ DL YIKEDI AVERHR++L S KLRML D++ +GI S
Sbjct: 169 LEADLRYIKEDITAVERHRLELCSWEQERSAKLRMLVPG-----------DQHGNGIACS 217
Query: 248 SLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSG-LSVVRKKRVHAQ 306
+ + S+ +LQNK+ D Q++S Q KD+ S+ QC+ G LSV RK+RVH+Q
Sbjct: 218 TQYVQDRMSSFNLQNKRADVNGQSSSKLLQLKDAYGRSEMQCVTTRGVLSVARKRRVHSQ 277
Query: 307 FNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAE 366
FNDLQ+CYLQKRR +QE D N + EGYN GL DFQSVL +FT+YSRLRV+AE
Sbjct: 278 FNDLQDCYLQKRRNW-----NRQEEDTNAMDIEGYNPGLEDFQSVLASFTQYSRLRVVAE 332
Query: 367 LRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS 426
L HGD+FHSANIVSSIEFDRD++LFATAGVSR IKVF+F+SVVNEP D+HCP+VE+ +RS
Sbjct: 333 LSHGDLFHSANIVSSIEFDRDEELFATAGVSRCIKVFEFSSVVNEPTDIHCPIVEISSRS 392
Query: 427 KLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVS 486
KLSCLSWNK+++N IASSDYEG+VTVWDV T QS+MEYEEHEKRAWSVDFS T+PSMLVS
Sbjct: 393 KLSCLSWNKYTRNHIASSDYEGVVTVWDVNTCQSMMEYEEHEKRAWSVDFSCTDPSMLVS 452
Query: 487 GSDDCKV 493
GSDDCKV
Sbjct: 453 GSDDCKV 459
>gi|168028370|ref|XP_001766701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682133|gb|EDQ68554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/512 (55%), Positives = 359/512 (70%), Gaps = 39/512 (7%)
Query: 8 PVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFL 67
P V AVK + + S + + + A A A LDKD LCPIC+Q +K+AFL
Sbjct: 16 PSVAAVKQEPRTGSWSSQDNKCELAMASKPA----------LDKDFLCPICIQTMKDAFL 65
Query: 68 TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLE 127
TACGHSFCY CI+THL NKS+CPCCG YLTNNQL+PNFLL+KLL+K SA Q+ ASP E
Sbjct: 66 TACGHSFCYTCIMTHLSNKSNCPCCGQYLTNNQLFPNFLLNKLLRKASASQLVSNASPAE 125
Query: 128 NFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKE 187
+ R ALQQG + VKE+DSLM LLS+KKRK EQEEAE NM+ILL+FLH R+QK +EL
Sbjct: 126 HLRLALQQGVDLPVKELDSLMHLLSDKKRKAEQEEAEANMEILLEFLHRSRQQKNEELNL 185
Query: 188 IQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRML-GDDSNTRKSWLSSIDKNSSGIIT 246
+Q DL ++KEDI+ VE+ R DL ++ ++K+RM+ G S++R L++ + S G T
Sbjct: 186 LQGDLQFLKEDISTVEKQRQDLLHITEKNALKIRMIAGGPSSSRPDTLATNENTSKGEAT 245
Query: 247 SSLNARGGSSAGSLQNK------KGDGKAQANSHGHQRKDSLTGSDSQCLNQSGL----- 295
S +RGG S+ + K D + + S G K+ + G S +QS L
Sbjct: 246 S--QSRGGQFGASVPSNLPPASLKRDYRGRVTSIG-TYKEMIGGDVSLSKSQSELKALTP 302
Query: 296 -----SVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREG---------Y 341
++ +K+RV AQ LQE YLQ+RR++A +Q+ + I+ ++ Y
Sbjct: 303 SPAVLTMAKKRRVVAQIEVLQEAYLQRRRKVAQVHRQEQKVHETIVRKDEEVNSARADLY 362
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
++GL DFQSVLT FTRYSRL VIAELRHGD+FHS+NIVSSIEF RDD+LFATAGVSRRIK
Sbjct: 363 SSGLDDFQSVLTAFTRYSRLSVIAELRHGDLFHSSNIVSSIEFGRDDELFATAGVSRRIK 422
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
+F+FA+VVNE A VHCPVVEM TRSKLSCLSWNK+ K+ IASSDYEGI+TVWDV +QS+
Sbjct: 423 IFEFATVVNEFAGVHCPVVEMSTRSKLSCLSWNKYIKSHIASSDYEGIITVWDVNRRQSI 482
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EYEEHEKRAWSVDFSRT+P+MLVSGSDD KV
Sbjct: 483 TEYEEHEKRAWSVDFSRTDPTMLVSGSDDGKV 514
>gi|168002467|ref|XP_001753935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694911|gb|EDQ81257.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 702
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/472 (58%), Positives = 336/472 (71%), Gaps = 27/472 (5%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
S+LDKD LCPIC+Q +K+A LTACGHSFCY CI THL NK +CPCCG YLTNNQL+PNFL
Sbjct: 47 SDLDKDFLCPICIQTMKDACLTACGHSFCYACITTHLNNKKNCPCCGLYLTNNQLFPNFL 106
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERN 166
L+KLL K SA Q+ ASP E+ R ALQQ V E+DSLM LLSEKKRK EQEEAE N
Sbjct: 107 LNKLLVKASASQLCSNASPAEHLRLALQQDVDFPVIELDSLMHLLSEKKRKAEQEEAETN 166
Query: 167 MQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDD 226
M+ILL+FL ++QK ++L IQ DL ++ EDI+ VE+ R DL RA+D Y +K+RM+G
Sbjct: 167 MEILLEFLRRSQQQKQEDLYLIQGDLQFLTEDISTVEKQRQDLLRAKDEYLLKIRMMGQY 226
Query: 227 SNTRKSWLSSIDKNSSGIITSSLNARGGSS--AGSLQNK-KGDGKAQANSHGHQRK---- 279
+ + + + G + + +GG+S A SL + D + + S G +K
Sbjct: 227 TGADTLAICE-NIGNGGATSQNRGGQGGASVPASSLSTSLQRDHRGRGASIGTHKKAILV 285
Query: 280 DSLTGS----DSQCLNQSG--LSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDK 333
+ LT S DSQ L S L + +K+RV AQF DLQE YLQ+RR++A KQ+
Sbjct: 286 EGLTLSKCQTDSQGLFSSPAVLIMAKKRRVMAQFEDLQEAYLQRRRKVAQAQRQKQKLSH 345
Query: 334 NIIHR---------EGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEF 384
+ + + Y +GL DFQSVL FTRYSRLRVIAELRHGD+FHS+NIVSSIEF
Sbjct: 346 TVADKGENVASAGSDRYCSGLHDFQSVLNAFTRYSRLRVIAELRHGDLFHSSNIVSSIEF 405
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
DRDD+ FAT GVSRRIKVF+FA+VVNE ADVHCPVVEM TRSKLSCLSWNK+ K+ IASS
Sbjct: 406 DRDDEFFATGGVSRRIKVFEFATVVNELADVHCPVVEMSTRSKLSCLSWNKYIKSHIASS 465
Query: 445 DYEGIVTVWDVTTQ----QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
DYEGI+TVWD+ QS+MEYEEHEKRAWSVDFSRT+P+MLVSGSDD K
Sbjct: 466 DYEGIITVWDINKHQAMLQSIMEYEEHEKRAWSVDFSRTDPTMLVSGSDDGK 517
>gi|413939108|gb|AFW73659.1| hypothetical protein ZEAMMB73_704258 [Zea mays]
Length = 491
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/361 (70%), Positives = 300/361 (83%), Gaps = 2/361 (0%)
Query: 134 QQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLH 193
++G + VKE+DSLM+L++EKKR+MEQ+E+E NMQILL FLHCLRKQK++EL EIQTDL
Sbjct: 5 RRGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLHCLRKQKLEELNEIQTDLQ 64
Query: 194 YIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARG 253
YIKEDI++VERHR +LYR ++RYS+KLRML D+ +K W S IDK S + +S
Sbjct: 65 YIKEDISSVERHRAELYRTKERYSMKLRMLLDEPTAQKMWPSPIDKASCRFLPNSRTPLS 124
Query: 254 GSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDS-QCLNQSGLSVVRKKRVHAQFNDLQE 312
GS G+LQNKK D KAQ + G QR+D+LT SD QSG + RK+RV AQFN+LQE
Sbjct: 125 GSCPGTLQNKKLDLKAQVSHQGFQRRDALTSSDPPNSPIQSGNVIARKRRVQAQFNELQE 184
Query: 313 CYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDI 372
YLQ+RR A Q ++E D ++REGY+AGL DFQSVLTTFTRYSRLRVIAELRHGD+
Sbjct: 185 YYLQRRRTGA-QARRQEERDIVAMNREGYHAGLQDFQSVLTTFTRYSRLRVIAELRHGDL 243
Query: 373 FHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLS 432
FHSANIVSSIEFDRDD+LFATAGVS+RIKVF+F++VVNEP+DVHCPVVEM TRSKLSCLS
Sbjct: 244 FHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLS 303
Query: 433 WNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
WNK+SKN IASSDYEGIVTVWDV T+QSVMEYEEHEKRAWSVDFSRT+ SMLVSGSDDCK
Sbjct: 304 WNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTDSSMLVSGSDDCK 363
Query: 493 V 493
V
Sbjct: 364 V 364
>gi|224116030|ref|XP_002317189.1| predicted protein [Populus trichocarpa]
gi|222860254|gb|EEE97801.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/452 (57%), Positives = 315/452 (69%), Gaps = 65/452 (14%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFC------YMCIITHLRNKSDCPCCGHYLTNNQL 101
ELDKD+ PICMQIIK+A +T+CGHSF + + + K+DCPCC HYLT N +
Sbjct: 29 ELDKDLF-PICMQIIKDASVTSCGHSFLMPPTTSLLLHVHYYSFKNDCPCCAHYLTYNHI 87
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
+PN LL+KLL++T ARQ++KTASP E+ RQALQQGCGVS +D LM+LL+EK RKMEQE
Sbjct: 88 FPNVLLNKLLERTYARQVAKTASPYEHLRQALQQGCGVSFTVVDGLMALLAEKTRKMEQE 147
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
EA+ NM+ILLDFL+CL KQK+D+L EIQTDL YI+EDIN VE+ RI L R DR+S+KL
Sbjct: 148 EADTNMRILLDFLYCLSKQKLDDLNEIQTDLQYIEEDINYVEKKRIQLSRENDRFSLKLG 207
Query: 222 MLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
M DD N++ ++T S G +KK +A+ N+
Sbjct: 208 MFADDPNSK-------------LVTQS---------GPNASKKKWVRAKLNAL------- 238
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGY 341
+C Q + VR Q C +QE + +REGY
Sbjct: 239 -----QECYLQKRRNWVR-----------QAC-------------KEQERGTDTSNREGY 269
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
N GL DFQSVLT FTR S+ RV+AELR GD+FHSANIVSSIEFDRDD+LFAT GVSRRIK
Sbjct: 270 NPGLEDFQSVLTNFTRCSQFRVVAELRQGDLFHSANIVSSIEFDRDDELFATTGVSRRIK 329
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
+F+F+ V+NEP DVHCPVVEM TRSKLSC+SWNK+ KN IASSDYEGIVTVWDVTT+QS+
Sbjct: 330 IFEFSKVMNEPEDVHCPVVEMSTRSKLSCVSWNKYMKNHIASSDYEGIVTVWDVTTRQSI 389
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
MEYEEHEKRAWSVDFS+ EPSMLVSGSDDCKV
Sbjct: 390 MEYEEHEKRAWSVDFSQNEPSMLVSGSDDCKV 421
>gi|302793522|ref|XP_002978526.1| hypothetical protein SELMODRAFT_176960 [Selaginella moellendorffii]
gi|300153875|gb|EFJ20512.1| hypothetical protein SELMODRAFT_176960 [Selaginella moellendorffii]
Length = 647
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/453 (57%), Positives = 319/453 (70%), Gaps = 21/453 (4%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
DKD CPIC+Q +K+AFLTACGHSFCYMCIITHL NK +CPCCG YLT++QLYPNFLL+K
Sbjct: 22 DKDFQCPICIQTMKDAFLTACGHSFCYMCIITHLNNKKNCPCCGVYLTSSQLYPNFLLNK 81
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQI 169
+LKK + QIS ASP E R ALQQG V +KEIDSL+ LLS+KKRK E EEAE NM++
Sbjct: 82 ILKKVATSQIS-CASPTEQLRFALQQGVDVPLKEIDSLLVLLSDKKRKAEHEEAEVNMEV 140
Query: 170 LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGD---- 225
LL+FL R+QK++EL EIQ DL ++EDI+ VE R +L ++R S+K R L D
Sbjct: 141 LLEFLQRSRQQKMEELSEIQGDLQSLREDISTVEIQRQELLKSRQTSSLKWRFLLDCPAL 200
Query: 226 DSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGS 285
D +++ N + + G + G Q K G +K+ T +
Sbjct: 201 DCPAQEN-----PYNRPAVPLHRVGQAGAALLGGEQRKATRGPLV-------KKNGGTSN 248
Query: 286 DSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRR---QMAN-QPHTKQESDKNIIHREGY 341
+ +KKR+ QF DLQ+CYL KRR QM + K+E D+
Sbjct: 249 GTSDFEPLPCKTAKKKRMLNQFEDLQDCYLNKRRRDRQMKKFEAIVKKEKDEEACGGFNQ 308
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
+GL DF+S+L FTRYSRL ++AELRHGD+FHS+NIVSSIEFDRDD+LFATAGVSRRIK
Sbjct: 309 PSGLEDFRSILAGFTRYSRLELVAELRHGDLFHSSNIVSSIEFDRDDELFATAGVSRRIK 368
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
+F+FA+VVNE ADVHCPV EM TRSKLSCLSWNK+ K +IASSDYEG VTVWDV + QSV
Sbjct: 369 IFEFATVVNELADVHCPVAEMSTRSKLSCLSWNKYIKGQIASSDYEGTVTVWDVNSCQSV 428
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVL 494
MEYEEHE+RAWSVDFSRT+P+MLVSGSDD KV+
Sbjct: 429 MEYEEHERRAWSVDFSRTDPTMLVSGSDDGKVV 461
>gi|302774074|ref|XP_002970454.1| hypothetical protein SELMODRAFT_171333 [Selaginella moellendorffii]
gi|300161970|gb|EFJ28584.1| hypothetical protein SELMODRAFT_171333 [Selaginella moellendorffii]
Length = 646
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/452 (58%), Positives = 320/452 (70%), Gaps = 21/452 (4%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
DKD CPIC+Q +K+AFLTACGHSFCYMCIITHL NK +CPCCG YLT++QLYPNFLL+K
Sbjct: 22 DKDFQCPICIQTMKDAFLTACGHSFCYMCIITHLNNKKNCPCCGVYLTSSQLYPNFLLNK 81
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQI 169
+LKK + QIS ASP E R ALQQG V +KEIDSL+ LLS+KKRK E EEAE NM++
Sbjct: 82 ILKKVATSQIS-CASPTEQLRFALQQGVDVPLKEIDSLLVLLSDKKRKAEHEEAEVNMEV 140
Query: 170 LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGD---- 225
LL+FL R+QK++EL EIQ DL ++EDI+AVE R +L ++R S+K R L D
Sbjct: 141 LLEFLQRSRQQKMEELSEIQGDLQSLREDISAVEIQRQELLKSRQTSSLKWRFLLDCPAL 200
Query: 226 DSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGS 285
D +++ N + + G + G Q K G + G S S
Sbjct: 201 DCAAQEN-----PYNRPAVPLHRVGQAGAALLGGEQRKATRGPLVKKNGG----ISNGTS 251
Query: 286 DSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRR---QMAN-QPHTKQESDKNIIHREGY 341
D + L +KKR+ QF DLQ+CYL KRR QM + K+E D+
Sbjct: 252 DFEPL---PCKTAKKKRMLNQFEDLQDCYLNKRRRDRQMKKLEAIVKKEKDEEGCGGFNQ 308
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
+GL DF+S+L FTRYSRL ++AELRHGD+FHS+NIVSSIEFDRDD+LFATAGVSRRIK
Sbjct: 309 PSGLEDFRSILAGFTRYSRLELVAELRHGDLFHSSNIVSSIEFDRDDELFATAGVSRRIK 368
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
+F+FA+VVNE ADVHCPV EM TRSKLSCLSWNK+ K +IASSDYEG VTVWDV + QSV
Sbjct: 369 IFEFATVVNELADVHCPVAEMSTRSKLSCLSWNKYIKGQIASSDYEGTVTVWDVNSCQSV 428
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
MEYEEHE+RAWSVDFSRT+P+MLVSGSDD KV
Sbjct: 429 MEYEEHERRAWSVDFSRTDPTMLVSGSDDGKV 460
>gi|168027087|ref|XP_001766062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682705|gb|EDQ69121.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/468 (54%), Positives = 333/468 (71%), Gaps = 15/468 (3%)
Query: 41 TSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQ 100
++++ S++DKD LCPIC Q +++AFLT+CGHSFCY CI THL N+++CP C YLT ++
Sbjct: 34 SADIARSDVDKDFLCPICFQPMEDAFLTSCGHSFCYSCITTHLNNRNNCPNCARYLTADR 93
Query: 101 LYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
L PNFL+ KL++K ++ S SP E+ R LQQG + +K+IDSL+ LLSE+KR++EQ
Sbjct: 94 LIPNFLVTKLMRKLTSFHCSGKISPAEHLRFVLQQGADLPMKDIDSLLHLLSERKRRVEQ 153
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKL 220
+EAE NM++LLDFLH + K +EL E+Q DL Y+KEDI VE R +L RA+ +++ +
Sbjct: 154 DEAESNMEVLLDFLHLSCQLKQEELAELQGDLQYLKEDIATVESRRQELLRAKKKFAKRS 213
Query: 221 RMLGDDSNTRKSWLSSIDKN-SSGIITSSLNARGGSSAGSLQNK-KGDGKAQANSHGHQR 278
R+ D S+ S D+ + G I+ +GG+ A ++K KG + ++
Sbjct: 214 RLTADLSSPTLDTHSGCDQGINEGAISVWRGGQGGALAPLREHKLKGGNSIRTSAFAMAI 273
Query: 279 KD--------SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMA-NQPH--- 326
KD + + SD + + +++RV AQF DLQE YL +RR++A NQ H
Sbjct: 274 KDDGKNGNYFANSFSDPHSESVGVPKINKRQRVLAQFEDLQEAYLMRRRKVARNQRHRQM 333
Query: 327 TKQESDKNIIH-REGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFD 385
KQES K E Y GL DF+S+L FTRYSRLRV+ EL HGD+FHS+NIVSSIEFD
Sbjct: 334 QKQESMKEASKLSESYQDGLEDFESILLAFTRYSRLRVVTELHHGDLFHSSNIVSSIEFD 393
Query: 386 RDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSD 445
RDD+ FATAGVSRRIKVFDF+ VVN+ ADVHCPVVE+PTRSKLSCLSWNK K+ IASSD
Sbjct: 394 RDDEFFATAGVSRRIKVFDFSRVVNDVADVHCPVVEIPTRSKLSCLSWNKCEKSLIASSD 453
Query: 446 YEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
YEGIVT+WDV T+QSVMEYEEHE+RAWSVDFSRTEPSMLVSGSDD KV
Sbjct: 454 YEGIVTLWDVNTRQSVMEYEEHERRAWSVDFSRTEPSMLVSGSDDGKV 501
>gi|168040460|ref|XP_001772712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675937|gb|EDQ62426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/459 (55%), Positives = 322/459 (70%), Gaps = 15/459 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+DKD LCPIC Q +++AF+T CGHSFCY CI THL N+S+CP C YLT+ L PNFLL
Sbjct: 44 VDKDFLCPICFQTMEDAFVTNCGHSFCYTCITTHLNNRSNCPSCARYLTSEHLIPNFLLS 103
Query: 109 KLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQ 168
KLLKKT A Q+ +SP E R AL+QG + +K++ SL+ LL E+KR++EQ EAE NM+
Sbjct: 104 KLLKKTVASQLLGISSPAEQLRLALEQGADLPLKDLGSLLCLLGERKRRLEQVEAESNME 163
Query: 169 ILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSN 228
+LLDFL+ R++K +E++E+Q DL ++KEDI VER R R +D+ + + + D S
Sbjct: 164 VLLDFLYLSRQRKQEEMQELQNDLSFLKEDIATVERRR-QFLRLKDKPAERACLSADSSL 222
Query: 229 TRKSWLSSIDKNS-SGIITSSLNARGGSSAGSLQNKKGDGKAQANS--------HGHQRK 279
R S K S G I+ +GG+ + + K G A NS G Q++
Sbjct: 223 PRLDLYSGCKKPSHGGAISVWRGGQGGAFSPPNEVKSMAGNADRNSAFLMSKKAEGIQKR 282
Query: 280 DSLTGSDSQCLNQSGL-SVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQ--ESDKNII 336
G+ +V +K+RV AQF DLQE YL +RRQ+A + + +Q E+ +N
Sbjct: 283 LPENPYIESHAGSMGVHAVSKKRRVLAQFEDLQEAYLLRRRQVARKQNQRQIQEAVRNTA 342
Query: 337 HR--EGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATA 394
+ E Y GL DF+SVLT FTRYSRLRV+AEL HGD+FHS+NIVSSIEFDRDD+ FATA
Sbjct: 343 TKGSESYQDGLEDFESVLTAFTRYSRLRVVAELHHGDLFHSSNIVSSIEFDRDDEFFATA 402
Query: 395 GVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWD 454
GVSRR+KVF+F +VVNE ADVHCP+VE+ TRSKLSCLSWNK +K IASSDYEG VTVWD
Sbjct: 403 GVSRRVKVFNFETVVNELADVHCPLVEIATRSKLSCLSWNKCAKPLIASSDYEGTVTVWD 462
Query: 455 VTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
V T+Q+VMEYEEHEKRAWSVDFSRTEPSMLVSGSDD KV
Sbjct: 463 VNTRQAVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDGKV 501
>gi|168054700|ref|XP_001779768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668853|gb|EDQ55452.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 629
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/453 (56%), Positives = 321/453 (70%), Gaps = 30/453 (6%)
Query: 62 IKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISK 121
+K+AFLTACGHSFCY CI+THL NK++CPCCG YLTN+Q++PNFLL K L K Q+
Sbjct: 1 MKDAFLTACGHSFCYKCIMTHLSNKNNCPCCGLYLTNSQIFPNFLLSKFLGKAPTSQLVS 60
Query: 122 TASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQK 181
ASP E+ R ALQQG + +++IDSLM LLSE KRK EQEEAE NM+ILL+FL R+Q+
Sbjct: 61 NASPAEHLRLALQQGADLPIEDIDSLMHLLSETKRKAEQEEAETNMEILLEFLDRSRQQR 120
Query: 182 VDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNS 241
+E IQ DL +++EDI+ VE+ R DL RA+++Y + +R+ G S + +I +N
Sbjct: 121 QEEFNLIQGDLQFLREDISIVEKQRQDLVRAKEKYGLIIRLSGSSSCMPDTL--AISQNR 178
Query: 242 SGIITSSLNARGGSSAGSL--QNKKGDGKAQANSHGHQRKDSLT--------GSDSQCLN 291
G G S +L + + D + + S +K+ L +DSQ L+
Sbjct: 179 CG-------QDGASVPATLLPTSVQRDQRGRGTSIEPHKKEILAEGVTLNKCQTDSQRLS 231
Query: 292 QSG--LSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR---------EG 340
S L++ +K+RV AQF DLQE YLQ RR++ KQ+ K + + +
Sbjct: 232 SSPAVLTMAKKRRVLAQFEDLQEAYLQHRRKVTQVQGQKQKVQKTVADKSEEVTFAGSDR 291
Query: 341 YNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
Y +GL DFQSVLT FTRYSR+RV+AELRHGD+FHS+NIVSSIEFDRDD+ FATAGVSRRI
Sbjct: 292 YCSGLNDFQSVLTAFTRYSRMRVVAELRHGDLFHSSNIVSSIEFDRDDEFFATAGVSRRI 351
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KVF+FA+VVNE ADVHCPVVE+ TRSKLS LSWNK K+ IASSDYEGI+TVWD+ T QS
Sbjct: 352 KVFEFATVVNELADVHCPVVEISTRSKLSSLSWNKCIKSHIASSDYEGIITVWDINTHQS 411
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
VMEYEEHEKRAWSVDFSRT+P+MLVSGSDD KV
Sbjct: 412 VMEYEEHEKRAWSVDFSRTDPTMLVSGSDDGKV 444
>gi|13925701|gb|AAK49415.1|AF261992_1 COP1, partial [Oryza sativa Indica Group]
Length = 519
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/333 (71%), Positives = 271/333 (81%), Gaps = 2/333 (0%)
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
E+E NMQILL FLHCLRKQK++EL EIQTDL YIKEDI+AVERHR++LYR ++RYS+KLR
Sbjct: 1 ESETNMQILLVFLHCLRKQKLEELNEIQTDLQYIKEDISAVERHRLELYRTKERYSMKLR 60
Query: 222 MLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
ML D+ K W S +DK S +S S+ G LQNKK D K Q + G QR+D
Sbjct: 61 MLLDEPAASKMWPSPMDKPSGLFPPNSRGPLSTSNPGGLQNKKLDLKGQISHQGFQRRDV 120
Query: 282 LTGSDSQCLN-QSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREG 340
LT SD QSG + RK+RV AQFN+LQE YLQ+RR A Q +E D I++EG
Sbjct: 121 LTCSDPPSAPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGA-QSRRLEERDIVTINKEG 179
Query: 341 YNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
Y+AGL DFQSVLTTFTRYSRLRVIAELRHGD+FHSANIVSSIEFDRDD+LFATAGVS+RI
Sbjct: 180 YHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRI 239
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KVF+F++VVNEP+DVHCPVVEM TRSKLSCLSWNK+SKN IASSDYEGIVTVWDV T+QS
Sbjct: 240 KVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQS 299
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV
Sbjct: 300 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 332
>gi|449516806|ref|XP_004165437.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 494
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/306 (73%), Positives = 261/306 (85%), Gaps = 1/306 (0%)
Query: 188 IQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITS 247
+Q DL +IKEDI+AVERHR++L RARDRYS+KLR GDD R+ WL+ +DK + G ++
Sbjct: 3 VQIDLQFIKEDISAVERHRMELSRARDRYSMKLRKAGDDMKAREPWLTLMDKRNDGPTST 62
Query: 248 SLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQF 307
SLN G SAG+ QNKK D ++Q +++G +KDSL+G++ Q +N +GLSV RKKRVHAQF
Sbjct: 63 SLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLSGAEPQ-VNHTGLSVARKKRVHAQF 121
Query: 308 NDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAEL 367
NDLQECYLQKRRQ+ NQ +QE DKN++HREGYN GL+DFQSVLTTFTRYSRLRVIAEL
Sbjct: 122 NDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTRYSRLRVIAEL 181
Query: 368 RHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSK 427
RHGD+FH+ NIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEP D HCP+VEM TR+K
Sbjct: 182 RHGDLFHNTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTRAK 241
Query: 428 LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
LSCLSW+K SKN IASSDYEGIVTVWDV QSVMEYEEHEKRAWSVDFSRTEPS LVSG
Sbjct: 242 LSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLVSG 301
Query: 488 SDDCKV 493
SDDCKV
Sbjct: 302 SDDCKV 307
>gi|168044506|ref|XP_001774722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674022|gb|EDQ60537.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/452 (54%), Positives = 312/452 (69%), Gaps = 20/452 (4%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
+++DKD CPIC+Q I++AFLT+CGH FCY CI THL +S+CP C YLT+ QL PNFL
Sbjct: 28 ADVDKDFQCPICLQTIEDAFLTSCGHFFCYSCITTHLDIRSNCPSCARYLTSEQLIPNFL 87
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERN 166
KL+KKT+A Q+ + S E R ALQQG + +K+++SL+ L+ E+KR EQEEAE N
Sbjct: 88 FSKLMKKTAASQLLDSTSSAEQLRLALQQGADLPMKDLNSLLRLIGERKRIHEQEEAECN 147
Query: 167 MQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDD 226
M+ILLDFLH +K +E++EIQ DL ++KEDI VE R ++ A+ ++ + +L
Sbjct: 148 MEILLDFLHLSHHRKQEEMQEIQGDLQFLKEDIAMVESRRQEILSAKKKFIKRSHLLTYS 207
Query: 227 SNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSD 286
S +K S G S+ R G S + + K N +S GS
Sbjct: 208 PPPSLDTHSGYEKLSDGGALSTW--RSGLDGAS--SPPSERKLLENPF----TESFDGST 259
Query: 287 S-QCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQ--ESDKNIIHR--EGY 341
Q LN +K+RV AQF DLQE YL +RRQ+A +Q ES N + + Y
Sbjct: 260 GVQTLN-------KKRRVLAQFEDLQEAYLVRRRQVALNQRCRQMQESGTNSTLKGVKSY 312
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
GL +F+SVLT F+RYSRLRV+AEL GD+FH++NIVSSIEFDRDD+ FATAGVSRRIK
Sbjct: 313 QDGLEEFESVLTAFSRYSRLRVVAELHRGDLFHNSNIVSSIEFDRDDEFFATAGVSRRIK 372
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
+FDFA+V+NE DVHCPVVE+PTRSK+SCLSWNK K IASSDYEGIVTVWDV T+QSV
Sbjct: 373 IFDFATVINELTDVHCPVVEIPTRSKMSCLSWNKCLKPLIASSDYEGIVTVWDVNTRQSV 432
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
MEYEEHEKRAWS+DFSRT+PSMLVSGSDD K+
Sbjct: 433 MEYEEHEKRAWSIDFSRTDPSMLVSGSDDGKM 464
>gi|357493175|ref|XP_003616876.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
gi|355518211|gb|AES99834.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
Length = 761
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/311 (71%), Positives = 260/311 (83%), Gaps = 9/311 (2%)
Query: 1 MDEVSTEPVVPAV-KPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICM 59
M+E S P+VPAV KP+ + + T D A +T ++ELDKD LCPICM
Sbjct: 1 MEEHSVGPLVPAVVKPEPSKNLSTTVTVTGDIAGGDNFPIAT----MTELDKDFLCPICM 56
Query: 60 QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQI 119
QIIK+AFLT+CGHSFCYMCIITHLRNKSDCPCCGHYLTN+ L+PNFLLDKLLKKTS RQI
Sbjct: 57 QIIKDAFLTSCGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQI 116
Query: 120 SKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRK 179
SKTASP+E+FRQA+Q+GC V++KE+D+L+SLL+EKKRKMEQEEAERNMQILLDFLHCLRK
Sbjct: 117 SKTASPVEHFRQAIQKGCEVTMKELDTLLSLLAEKKRKMEQEEAERNMQILLDFLHCLRK 176
Query: 180 QKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDK 239
QKVDELKE+QTDL +IKEDI AVE+HR+DLYRARDRYSVKLRML DDS RKSW SS+DK
Sbjct: 177 QKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSWHSSMDK 235
Query: 240 NSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH--QRKDSLTGSDSQCLNQSGLSV 297
NSSG+ +S LN RGG S+GS KK DGK+Q +SHGH QR+D ++GSDSQ +NQSGL++
Sbjct: 236 NSSGLASSPLNIRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPISGSDSQYINQSGLAL 294
Query: 298 VRKKRVHAQFN 308
VRKKRVH Q N
Sbjct: 295 VRKKRVHTQHN 305
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 176/189 (93%)
Query: 305 AQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVI 364
QFNDLQECYLQKRRQ A++PH +QE D N I REGY+ GL DFQSVLTTFTRYSRLRVI
Sbjct: 386 VQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSGGLDDFQSVLTTFTRYSRLRVI 445
Query: 365 AELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPT 424
AE+RHGDIFHSANIVSSIEFDRDD LFATAGVSRRIKVFDF++VVNEP D HCPVVEM T
Sbjct: 446 AEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTT 505
Query: 425 RSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSML 484
RSKLSCLSWNK++KN+IASSDYEGIVTVWDVTT++S+MEYEEHEKRAWSVDFSRT+PSML
Sbjct: 506 RSKLSCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSML 565
Query: 485 VSGSDDCKV 493
VSGSDDCKV
Sbjct: 566 VSGSDDCKV 574
>gi|168013805|ref|XP_001759457.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689387|gb|EDQ75759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 668
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/486 (47%), Positives = 321/486 (66%), Gaps = 27/486 (5%)
Query: 27 QETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK 86
+E+ AA++ ++ + +D+D LCPIC+ +K+AFLT CGH+FCY CI+THL+N+
Sbjct: 6 EESFAASSVEEKYESAVRARANMDRDFLCPICLHTMKDAFLTRCGHNFCYSCIMTHLKNR 65
Query: 87 SDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDS 146
++CPCC YLT + L PNFLL KL+ + SA + K ASP E R AL+Q + KE+DS
Sbjct: 66 NNCPCCAQYLTIDLLMPNFLLTKLMNELSASMMLKNASPAEQLRLALEQDADLPPKELDS 125
Query: 147 LMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHR 206
L+ LL+E+K+K+++EEAE N +I+ DFLH L+ +K++ +KE+Q+DL ++K+DI VER
Sbjct: 126 LLLLLNERKQKLDREEAEINTEIIFDFLHRLQFRKLEAMKEVQSDLQFLKDDIATVERRL 185
Query: 207 IDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGD 266
L + +S ++ +S LS +D ++ TS+ A +G
Sbjct: 186 RCLLASNKSHSKRV--------CEESPLSDLDIHTEYGSTSTGGAVSMWRSGQSGAYTPP 237
Query: 267 GKAQANSHGHQRKDSLTGS------------DSQCLNQSGLSVVRKKRVHAQFNDLQECY 314
G+ + N R +L + DS + +K+RV AQF +LQ Y
Sbjct: 238 GEEKLNRAERIRIRNLAYTSVSTDIENDPSVDSPGEYAGAHKIAKKRRVLAQFEELQGAY 297
Query: 315 LQKRRQMANQPHTKQESDKNIIHR------EGYNAGLADFQSVLTTFTRYSRLRVIAELR 368
+RRQ+A + KQ+S +++ + + Y+ GL DFQS+LTT+TRYS+LRV+AEL
Sbjct: 298 FLRRRQIAFKECQKQQSQESVSKKGAYKDWDTYDDGLDDFQSILTTYTRYSQLRVVAELH 357
Query: 369 HGDIFH-SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSK 427
H D F S+NIVSSI+FD DDQLFATAGV+RRIK+F+FA+V+++ DVHCPV E+PTRSK
Sbjct: 358 HDDPFQPSSNIVSSIDFDGDDQLFATAGVTRRIKIFNFATVIDDVVDVHCPVTEIPTRSK 417
Query: 428 LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
LSCLSWNK K +ASSDYEGI+ VWDV QSV+EYEEHEKRAWSVDFS +PSM+VSG
Sbjct: 418 LSCLSWNKLKKPLVASSDYEGIIAVWDVNRSQSVVEYEEHEKRAWSVDFSCIDPSMMVSG 477
Query: 488 SDDCKV 493
SDD KV
Sbjct: 478 SDDGKV 483
>gi|302760721|ref|XP_002963783.1| hypothetical protein SELMODRAFT_141846 [Selaginella moellendorffii]
gi|300169051|gb|EFJ35654.1| hypothetical protein SELMODRAFT_141846 [Selaginella moellendorffii]
Length = 560
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/418 (50%), Positives = 287/418 (68%), Gaps = 39/418 (9%)
Query: 77 MCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQG 136
MCI+THL KS+CPCCG YLT+ QLYPNFLL+K+L+K S Q++ +ASP E+ R AL+QG
Sbjct: 1 MCIMTHLNIKSNCPCCGAYLTSGQLYPNFLLNKILRKASVCQVASSASPGEHLRLALKQG 60
Query: 137 CGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIK 196
+S+K+ID+L+SLL+EKKRK E+EEAE N+++L DFL R+QK EL EIQTDL ++K
Sbjct: 61 ADISMKDIDTLLSLLTEKKRKAEREEAETNLEVLHDFLQRSRQQKQQELNEIQTDLQWLK 120
Query: 197 EDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSS 256
EDI AVE+ L ++++R++ + S R +
Sbjct: 121 EDIAAVEKQATSLKKSKERHASPVHQKLPSSRCR------------------------AK 156
Query: 257 AGSLQNKKGDGKAQANSHGHQRKDSLTG-SDSQCLNQSGLSVVRKKRVHAQFNDLQECYL 315
A + + DG+ + +G +S+ L+ +K+RV +QF DLQ+CYL
Sbjct: 157 ASEAEGRSPDGEKARLKRAQTDDEGTSGVRESEVLS-------KKRRVLSQFEDLQDCYL 209
Query: 316 QKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHS 375
QKR+Q + P ES + GL DFQ+VL +FTRYS+LRV+AE+RH D+F +
Sbjct: 210 QKRKQ-SQDPSETGES------LSSHATGLEDFQAVLNSFTRYSQLRVVAEVRHPDLFQN 262
Query: 376 ANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNK 435
+NIVSSIEFDRDD+ FATAGVSRRIKVF++++VVN ADVH P +E+P+R+KLSCLSWNK
Sbjct: 263 SNIVSSIEFDRDDEFFATAGVSRRIKVFEYSAVVNSSADVHYPAMEIPSRAKLSCLSWNK 322
Query: 436 FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
K+ IASSDY+G VT+WDV QS+MEYEEH KRAWSVDF+RT+P++LVSGSDD K+
Sbjct: 323 CIKHHIASSDYDGSVTIWDVNNAQSIMEYEEHAKRAWSVDFARTDPNLLVSGSDDGKL 380
>gi|27357054|gb|AAN86553.1| COP1 [Brassica rapa subsp. pekinensis]
Length = 254
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/261 (70%), Positives = 217/261 (83%), Gaps = 9/261 (3%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS 115
PICMQIIK+AFLT+CGHSFCYMCI+THL NKSDCPCC HYLT QLYPNFLLDKLLKKTS
Sbjct: 2 PICMQIIKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLLDKLLKKTS 61
Query: 116 ARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLH 175
A QISKTASP+E FR +++QG VS+KE+D L ++L+EKKRK+EQEEAERNMQILL+FLH
Sbjct: 62 AHQISKTASPVEQFRHSIEQGREVSIKELDVLSTILAEKKRKLEQEEAERNMQILLEFLH 121
Query: 176 CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLS 235
L+K+KVDEL EIQ DL YIKED+NAVERHRI+LYRARDRYS+KLRML DD KS S
Sbjct: 122 MLKKKKVDELNEIQNDLQYIKEDVNAVERHRIELYRARDRYSMKLRMLADDPLGSKSRSS 181
Query: 236 SIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKD-SLTGSDSQCLNQSG 294
S+D+N+ G+ SS +A GG ++G+L KK DG QRKD S+T +SQ ++QSG
Sbjct: 182 SVDRNTIGLFPSSRSAHGGLASGNLMYKKMDGS--------QRKDVSVTELNSQHMSQSG 233
Query: 295 LSVVRKKRVHAQFNDLQECYL 315
L+V+RKKRVHAQFNDLQECYL
Sbjct: 234 LAVMRKKRVHAQFNDLQECYL 254
>gi|327493249|gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]
Length = 173
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 139/168 (82%), Positives = 157/168 (93%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
ELD+++LCPICMQIIK+AFLTACGHSFCYMCI+THL NKSDCPCC HYLT +QLYPNFLL
Sbjct: 6 ELDRELLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLL 65
Query: 108 DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
DKLLKKTSARQISKTASP+E FR +L+QGC VS+KE+D+L+S+LSEKKRK+EQEEAERNM
Sbjct: 66 DKLLKKTSARQISKTASPVEQFRHSLEQGCEVSIKELDALLSMLSEKKRKLEQEEAERNM 125
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDR 215
QILLDFL LRKQKVDEL E+Q DL YIKED+N+VERHRIDLYRARDR
Sbjct: 126 QILLDFLQMLRKQKVDELNEVQHDLQYIKEDLNSVERHRIDLYRARDR 173
>gi|307211652|gb|EFN87676.1| E3 ubiquitin-protein ligase RFWD2 [Harpegnathos saltator]
Length = 688
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 253/471 (53%), Gaps = 45/471 (9%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLL 111
D LCPIC +I EA +T CGH+FCY CI+ L K CP C L+ ++PNFLL +L+
Sbjct: 44 DYLCPICFDLIDEAHITRCGHTFCYSCIVKSLETKDRCPKCSFTLSKQDIFPNFLLHELI 103
Query: 112 KKTSARQ--ISKTASPLENFRQ------ALQQGC------------GVSVKEIDSLMSLL 151
K R +S+ S + R+ +L C +++ +++ ++ +L
Sbjct: 104 LKYKIRSKGLSQIGSYATDGRRKSAGTDSLSSACDGLRNIVAAESANLTLPDVNVMLEVL 163
Query: 152 SEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY- 210
+++K +E E ++L +FL L +QK ++ ++Q ++ IK D+ VE D+
Sbjct: 164 TQRKHLLEAETCTAQNKLLHEFLKHLLQQKEEQKNQLQKEVALIKRDMEEVENILKDVQN 223
Query: 211 ---RARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
R D V S RK L ID S ++ S A G + N G G
Sbjct: 224 KCPRVEDLKKVSEHETAQVSAIRKEMLGLIDIIDSNMVKPSDKAVGMTDT-FFANHPG-G 281
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQ--MANQP 325
AQ + H +L +R+KR+HA F+D +CY R + + Q
Sbjct: 282 SAQKQNEYHPGGSTLA--------------IRRKRLHAHFDDFVQCYFDSRGKELLLGQK 327
Query: 326 HTKQESDKNIIHREGYN--AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSI 382
+++ H ++ +GL F+ L F+RY+ LR +A L + DIF+++ IVSSI
Sbjct: 328 SQLSQNEAQAQHGGAHSTSSGLDVFRENLVKFSRYNSLRSLATLNYSSDIFNNSTIVSSI 387
Query: 383 EFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIA 442
EFD+D++ FA AGV++RIKVFD+ +V+ + D+H P VEM + SK+SC+SWN F K +A
Sbjct: 388 EFDKDNEFFAIAGVTKRIKVFDYGAVIRDTVDIHYPCVEMVSSSKISCVSWNSFHKGMLA 447
Query: 443 SSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
SSDYEG VTVWD TT Q ++EHEKR WSVDF+ + ++ SGSDD +V
Sbjct: 448 SSDYEGTVTVWDATTGQRTKAFQEHEKRCWSVDFNDVDTKLIASGSDDARV 498
>gi|328875233|gb|EGG23598.1| hypothetical protein DFA_05732 [Dictyostelium fasciculatum]
Length = 751
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 263/472 (55%), Gaps = 67/472 (14%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
++D + CPIC+QIIKE F+T CGHSFCY CI+T + +K+ CP C HYLT +Q++PNF L
Sbjct: 133 DIDDTLSCPICLQIIKEPFITRCGHSFCYQCILTQITDKTSCPICLHYLTRDQIFPNFAL 192
Query: 108 DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
+ +++K S ++ T P++ + + +S+ +I+++M+ L
Sbjct: 193 NTMVEKFSHSHLA-TTPPIKQLQNTITHE-NISITDINNIMATL---------------- 234
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDS 227
+ K+K+ EL++ Q + + + + + +++ Y+ + ++ +L D
Sbjct: 235 ---------MEKKKLLELQDQQVEYEILLDFLTKTKGQKMEAYKQLKK---QIVLLEQD- 281
Query: 228 NTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDS 287
+S I+ +S L + S+ + + ++S +++ DS
Sbjct: 282 ------ISRIENETSN--QQQLTSDSNPSSSTTTTTTSSSSSSSSSSTTTAVNNVQTKDS 333
Query: 288 QCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESD--------------- 332
NQ + +K+++ DLQ CY ++ N + + +
Sbjct: 334 SKENQKLEN--KKRKIDTHLEDLQNCYFSTYNEIENNNNNSKSNGNNNNNTSSSSSTSSS 391
Query: 333 ----------KNIIHREGYNA-GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSS 381
++ ++R+ N+ GL F L+ FTRY+ +VI+ L++GD+F++++IVSS
Sbjct: 392 SSLSNDLLLMEDQMNRKMNNSRGLLTFSKNLSRFTRYNEFKVISTLKYGDLFNTSSIVSS 451
Query: 382 IEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRI 441
IEFD+DD+ FATAGV+++IKVF+F+ V + DVH PV EM RSK+SCLSWN + KN+I
Sbjct: 452 IEFDKDDEFFATAGVTKKIKVFEFSQVTMKDVDVHAPVKEMVCRSKISCLSWNTYFKNQI 511
Query: 442 ASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
ASSDYEGI+T+WDV T Q + EEHEKR WSVDFSRT+P+ SGSDD KV
Sbjct: 512 ASSDYEGIITLWDVNTGQEMAMMEEHEKRVWSVDFSRTDPTQFASGSDDTKV 563
>gi|427785535|gb|JAA58219.1| Putative e3 ubiquitin-ligase protein [Rhipicephalus pulchellus]
Length = 626
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 247/453 (54%), Gaps = 65/453 (14%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL-TNNQLYPNFLLD 108
+ D LCPIC +I+EA +T CGH+FCY CI T L + CP C + Q+YPNFLL+
Sbjct: 41 NSDFLCPICFDVIEEAHMTPCGHTFCYKCITTGLEYSNRCPKCNFVIEKKEQIYPNFLLN 100
Query: 109 KLLKKTSARQISKTA-----SPL--ENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
+L+ K + K SP+ E LQ+ +++ ++ +++ +LS+KK+++E +
Sbjct: 101 ELITKYKQKAADKKLKLEGNSPVVSELHELILQESDSMNLNDVYNMLDVLSQKKQQLEAD 160
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
Q+L +FL +RK K +++ ++ T+L +I +D+ VE
Sbjct: 161 CKAAQAQLLREFLQQVRKHKQEQMHQLTTELSFIDQDLKRVEE----------------- 203
Query: 222 MLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
SS ++ ++ + GG +A S A A++ S
Sbjct: 204 -------------SSKSPDNCWLVDPASCLTGGDTASS---------ANASTMQDGFNGS 241
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGY 341
GS Q + + S R+KRVH F+DL++CYL R + N +
Sbjct: 242 KHGSKPQWVQTTLAS--RRKRVHLHFDDLEDCYLTARTKSLNSTSSD------------- 286
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
GL +F L+ FTRYS +R +A L + D+ + +IVSSIEFD+D++ FA AGV+++I
Sbjct: 287 --GLKEFTENLSKFTRYSSMRPLATLNYATDLLNGTSIVSSIEFDKDNEFFAIAGVTKKI 344
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KVF++ +V+ + D+H PV EM SK+SC+SW+ + K +ASSDYEG VT+WD T Q
Sbjct: 345 KVFEYGTVIQDIVDIHYPVNEMMCNSKISCISWSSYHKGMLASSDYEGTVTIWDAFTGQK 404
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
V Y+EHEKR WSVDF++ + ++ SGSDD KV
Sbjct: 405 VKMYQEHEKRCWSVDFNKVDTKIIASGSDDAKV 437
>gi|340725942|ref|XP_003401323.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Bombus
terrestris]
Length = 676
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 252/469 (53%), Gaps = 74/469 (15%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
+ D LCPIC+++I EA +T CGH+FCY CII L CP C + LT ++PNFLL +
Sbjct: 67 NNDYLCPICLEVIDEAHITRCGHTFCYRCIIKSLEANGRCPKCSYALTQQDIFPNFLLHE 126
Query: 110 LLKK--TSARQISKTAS------------------PLENFRQALQ-QGCGVSVKEIDSLM 148
L+ K T + +++ S P + R + + +++ +++ ++
Sbjct: 127 LISKYKTRIKGLAELGSSYAADGRHRVVGTDLPVPPHDGLRDIIAAESANLTLPDVNVML 186
Query: 149 SLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRID 208
+L+++K +E E ++L +FL L +QK ++ ++Q ++ IK+D+ V
Sbjct: 187 EVLTQRKHLLEAETCTAQNKLLHEFLKHLLQQKEEQKNQLQKEIALIKKDMEEV------ 240
Query: 209 LYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGK 268
S RK + ID S ++ + A S GS G
Sbjct: 241 ------------------SAIRKEMIGLIDIIDSNMVKPNEKA---SVVGSETFINPTGS 279
Query: 269 AQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQ---MANQP 325
+ N D GS VR+KR+HA F+D +CY R + + ++
Sbjct: 280 KKQN-------DYAVGSTL---------AVRRKRMHAHFDDFVQCYFDSRAKELLLGHKS 323
Query: 326 HTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEF 384
H++ +S +G ++GL F+ L F+RY LR +A L + DIF+++ IVSSIEF
Sbjct: 324 HSQSDS------WQGTSSGLDVFRENLVKFSRYKALRPLATLNYSSDIFNNSTIVSSIEF 377
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
D+D++ FA AGV++RIKVFD+++V+ + D+H P VEM + SK+SC+SWN F K +ASS
Sbjct: 378 DKDNEFFAIAGVTKRIKVFDYSAVIRDTVDIHYPCVEMVSSSKISCVSWNSFHKGMLASS 437
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
DYEGIVTVWD T Q ++EHEKR WSVDF+ + ++ SGSDD +V
Sbjct: 438 DYEGIVTVWDAATCQRTKTFQEHEKRCWSVDFNDVDTKLIASGSDDARV 486
>gi|345496707|ref|XP_003427793.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Nasonia
vitripennis]
Length = 675
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 251/470 (53%), Gaps = 51/470 (10%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
+ D LCPIC + I+EA +T CGH+FCY CII L + CP C LT ++PNFLL++
Sbjct: 41 NSDYLCPICFETIEEAHVTRCGHTFCYKCIIRSLESLGRCPKCNINLTQQDIFPNFLLNE 100
Query: 110 LLKK--TSARQISK-------------TASP----------LENFRQALQQGCGVSVKEI 144
L+ K T A+ I T P L NF + +S+ ++
Sbjct: 101 LIAKYKTRAKGIGALDRTLALDNKGKGTFIPMDSSVGISDGLRNFIAS--DSTSLSLPDV 158
Query: 145 DSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVER 204
++++ +L+++K +E E ++L +FL L QK ++ ++Q ++ IK DI VE
Sbjct: 159 NAMLEVLTQRKHLLEAESCAAQNRLLYEFLKHLLTQKEEQRNQLQKEVALIKSDIKEVEN 218
Query: 205 HRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKK 264
DL R R L + + + +++I K +I N S+
Sbjct: 219 ILKDLQRKCPR----LEDVKKTTEYDTAQVTAIRKEMINLI----NIIDSSTIKPCDETD 270
Query: 265 GDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQ 324
A ANS +Q K +T S + VR++R+HA F+D +CY R A +
Sbjct: 271 QVPSAFANSSSNQSKYDITSSSTL--------AVRRRRMHAHFDDFVQCYFDAR---AKE 319
Query: 325 PHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIE 383
H S + + ++GL F+ L F+RY+ LR +A L + DIF+ + IVSSIE
Sbjct: 320 LHFGANSSE----FQSTSSGLDVFREDLVKFSRYNSLRPLATLNYSSDIFNHSTIVSSIE 375
Query: 384 FDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIAS 443
FD+D++ FA AGV++RIKVFD+ +V+ D+H P VEM + SK+SC+SWN F K +AS
Sbjct: 376 FDKDNEFFAIAGVTKRIKVFDYNTVIRGTVDLHYPCVEMTSSSKISCVSWNSFHKGVLAS 435
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
SDYEG VTVWD T Q + EHEKR WS+DF+ + ++ SGSDD +V
Sbjct: 436 SDYEGTVTVWDAMTGQRTKAFHEHEKRCWSIDFNDVDTRLIASGSDDARV 485
>gi|302784374|ref|XP_002973959.1| hypothetical protein SELMODRAFT_451299 [Selaginella moellendorffii]
gi|300158291|gb|EFJ24914.1| hypothetical protein SELMODRAFT_451299 [Selaginella moellendorffii]
Length = 634
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 240/458 (52%), Gaps = 70/458 (15%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +++L+KD+ CP+C Q +++ FLTACGHSFCY C+ THL ++ CPCC YLT +YP
Sbjct: 44 VALADLEKDLSCPVCFQTLRDPFLTACGHSFCYSCVSTHLNGRNSCPCCSSYLTTKLMYP 103
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQEE 162
N LL K++++ + SP EN R ALQ G +S+KEID L++LLS++K K + E
Sbjct: 104 NVLLGKVVRELQTLKSLTRGSPTENLRVALQHGAHDMSLKEIDFLLNLLSDRKMKSQHRE 163
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
AE NM LL+F H L+++K Q +L +KED+ A++ + L + R +
Sbjct: 164 AEENMDYLLEFFHELKRRK-------QLELDKVKEDMRALKNDLLSLRQERSQLQ----- 211
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+KS+L++ ++S S A LQ KA
Sbjct: 212 -----QQKKSYLTAFSGAKMSASSTSSGISQNSVAKLLQPTPKRRKAMV----------- 255
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
+ Q++ +E Y+ + R+ + R Y
Sbjct: 256 --------------------LIEQYDLFREIYIDEIRRCQS--------------RGSYG 281
Query: 343 AGLADFQSVLTTFTRYSR-----LRVIAELR--HGDIFHSANIVSSIEFDRDDQLFATAG 395
+GL F+SV++ F RY L+ EL N + S++FD D+ F TA
Sbjct: 282 SGLDTFRSVVSGFCRYRYDFSMYLKAFQELTMLQKTTCIIGNSIRSLDFDPGDEFFVTAS 341
Query: 396 VSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
VS ++VF+F V V P +E+ T KLSC+SW+KFSK+ +A+SDY+GI+ +WD+
Sbjct: 342 VSGYLRVFEFPKAVRWSLVVWNPSLELQTGKKLSCVSWDKFSKSCVATSDYDGIIKIWDI 401
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ Q+ + Y+EHE+R WSVDFS EPS LVSG DD KV
Sbjct: 402 SACQNTVNYDEHERRIWSVDFSPMEPSRLVSGGDDGKV 439
>gi|73961335|ref|XP_537181.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Canis lupus
familiaris]
Length = 733
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 251/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q LQ G + + ++ ++ LL +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 307
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 308 ----VSEDSTVPQ--FEAPSPSHSNIIDSTEYSQPPGFSGSSQTKK-------------- 347
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 348 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 392
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 393 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 443
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 444 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 503
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 504 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 540
>gi|348577823|ref|XP_003474683.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cavia porcellus]
Length = 954
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 279 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 338
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 339 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGADQDNLDLANVNLMLELLVQKKKQL 398
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 399 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 451
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 452 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 491
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 492 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDARTASQLD----- 536
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 537 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 587
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 588 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 647
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 648 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 684
>gi|449509373|ref|XP_002192026.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Taeniopygia guttata]
Length = 671
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 249/456 (54%), Gaps = 64/456 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 73 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 132
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q +Q G + + ++ ++ LL +KK+++
Sbjct: 133 ILKQKQRSEEKRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQL 192
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 193 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 245
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 246 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 285
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR 338
Q S L+ R+KR+ A F DL++CY R T+ D +
Sbjct: 286 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRM-------TRVSDDSRTTSQ 328
Query: 339 EGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVS 397
L +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+
Sbjct: 329 ------LDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVT 382
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T
Sbjct: 383 KKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFT 442
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 443 GQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 478
>gi|355746208|gb|EHH50833.1| hypothetical protein EGM_01718, partial [Macaca fascicularis]
Length = 625
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 27 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 86
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + I+ ++ LL +KK+++
Sbjct: 87 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANINLMLELLVQKKKQL 146
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 147 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 199
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 200 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 239
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 240 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 284
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 285 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 335
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 336 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 395
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 396 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 432
>gi|297662665|ref|XP_002809816.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Pongo
abelii]
Length = 731
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 345
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 346 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 390
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 391 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538
>gi|21359963|ref|NP_071902.2| E3 ubiquitin-protein ligase RFWD2 isoform a [Homo sapiens]
gi|114568088|ref|XP_514018.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Pan
troglodytes]
gi|55976539|sp|Q8NHY2.1|RFWD2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RFWD2; AltName:
Full=Constitutive photomorphogenesis protein 1 homolog;
Short=hCOP1; AltName: Full=RING finger and WD repeat
domain protein 2; AltName: Full=RING finger protein 200
gi|21105537|gb|AAM34692.1|AF508940_1 constitutive photomorphogenic protein [Homo sapiens]
gi|28394261|tpg|DAA01050.1| TPA_exp: RING finger protein COP1 [Homo sapiens]
gi|33327265|gb|AAQ08989.1| putative ubiquitin ligase COP1 [Homo sapiens]
gi|63102253|gb|AAH94728.1| Ring finger and WD repeat domain 2 [Homo sapiens]
gi|119611406|gb|EAW91000.1| ring finger and WD repeat domain 2, isoform CRA_b [Homo sapiens]
gi|189054516|dbj|BAG37289.1| unnamed protein product [Homo sapiens]
gi|410223718|gb|JAA09078.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410259872|gb|JAA17902.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410301282|gb|JAA29241.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410339119|gb|JAA38506.1| ring finger and WD repeat domain 2 [Pan troglodytes]
Length = 731
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 345
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 346 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 390
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 391 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538
>gi|388452804|ref|NP_001253194.1| E3 ubiquitin-protein ligase RFWD2 [Macaca mulatta]
gi|402858319|ref|XP_003893659.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Papio
anubis]
gi|383420755|gb|AFH33591.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 731
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 345
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 346 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 390
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 391 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 442 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538
>gi|332219663|ref|XP_003258975.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Nomascus
leucogenys]
Length = 731
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 345
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 346 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 390
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 391 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 442 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538
>gi|296229716|ref|XP_002760382.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Callithrix
jacchus]
Length = 731
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 249/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRCEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 345
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R +++ T + D
Sbjct: 346 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSHISDDSRTASQLD----- 390
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 391 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 442 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538
>gi|296478996|tpg|DAA21111.1| TPA: ring finger and WD repeat domain 2 [Bos taurus]
Length = 735
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 137 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 196
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 197 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 256
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 257 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 309
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 310 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 349
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 350 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 394
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 395 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 505
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 506 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 542
>gi|344278495|ref|XP_003411029.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Loxodonta africana]
Length = 720
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 251/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q LQ G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQMLQDVLGTDQDNLDLANVNFMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 345
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 346 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 390
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 391 ---------EFQECLSRFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538
>gi|157074030|ref|NP_001096726.1| E3 ubiquitin-protein ligase RFWD2 [Bos taurus]
gi|126010815|gb|AAI33613.1| RFWD2 protein [Bos taurus]
Length = 735
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 137 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 196
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 197 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 256
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 257 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 309
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 310 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 349
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 350 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 394
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 395 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 505
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 506 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 542
>gi|241167385|ref|XP_002410055.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]
gi|215494716|gb|EEC04357.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]
Length = 602
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 247/451 (54%), Gaps = 67/451 (14%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL-TNNQLYPNFLLDKLLKKT 114
PIC II+EA +T CGH+FCY CI T L + CP C + Q+YPNFLL++L+ K
Sbjct: 1 PICFDIIEEAHMTPCGHTFCYKCITTGLEYSNRCPKCNFVVEKKEQIYPNFLLNELITKY 60
Query: 115 SARQISK-----TASPLENFRQAL-------QQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
+ K T L F A Q+ + + ++ +++ +LS+KK+++E +
Sbjct: 61 KQKLADKKLKMQTVRGLHFFWVATGFLLLIAQEADNMDLNDVYNMLEILSQKKQQLEADC 120
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL +FL +RK K +++ ++ ++L++I ED+ +VE + +R
Sbjct: 121 KAAQAQILKEFLQQVRKHKQEQMDQLTSELNFIDEDLRSVEVLFTLHFVEPER------- 173
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
SWL+ +D +SS + + Q+ DG N H
Sbjct: 174 ---------SWLAGMDSSSSELQAVPVE----------QSAMQDG---FNGSKH------ 205
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
G+ Q L QS L+ R+KRVH F+DL++CYL R + T SD
Sbjct: 206 -GAKPQWL-QSTLAA-RRKRVHLHFDDLEQCYLSARTKNL----TSTSSD---------- 248
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
GL +F L+ FTRY +R +A L + D+ + +IVSSIEFD+D++ FA AGV+++IK
Sbjct: 249 -GLREFTENLSKFTRYCSMRPLATLNYATDLLNGTSIVSSIEFDKDNEFFAIAGVTKKIK 307
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF++ +V+ + D+H PV EM SK+SC+SW+ + K +ASSDYEG VT+WD T Q V
Sbjct: 308 VFEYGTVIQDIVDIHYPVNEMMCNSKISCISWSSYHKGMLASSDYEGTVTIWDAFTGQKV 367
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
++EHEKR WSVDF++ + ++ SGSDD K
Sbjct: 368 KMFQEHEKRCWSVDFNKVDTKLIASGSDDAK 398
>gi|301770741|ref|XP_002920790.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Ailuropoda
melanoleuca]
Length = 722
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 124 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 183
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 184 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 243
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 244 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 296
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 297 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 336
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 337 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 381
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 382 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 432
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 433 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 492
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 493 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 529
>gi|302771373|ref|XP_002969105.1| hypothetical protein SELMODRAFT_451298 [Selaginella moellendorffii]
gi|300163610|gb|EFJ30221.1| hypothetical protein SELMODRAFT_451298 [Selaginella moellendorffii]
Length = 595
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 234/451 (51%), Gaps = 85/451 (18%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +++L+KD+ CP+C Q +++ FLTACGHSFCY C+ THL +S CPCC YLT +YP
Sbjct: 44 VALADLEKDLSCPVCFQTLRDPFLTACGHSFCYSCVSTHLNGRSSCPCCSSYLTTKLMYP 103
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQEE 162
N LL K++++ + SP EN R ALQ G +S+KEID L++LLS++K K + E
Sbjct: 104 NVLLGKVVRELQTLKSLTRGSPTENLRVALQHGAHDMSLKEIDFLLNLLSDRKMKAQHRE 163
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
AE NM LL+F H L+++K Q +L +KED+ A++ + L + R +
Sbjct: 164 AEENMDYLLEFFHELKRRK-------QLELDKVKEDMRALKNDLLSLRQERSQLQ----- 211
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+KS+L++ ++S S A LQ KA
Sbjct: 212 -----QQKKSYLTAFSGAKMSASSTSSGISQNSVAKLLQPTPKRRKAMV----------- 255
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
+ Q++ +E Y+ + R+ + R Y
Sbjct: 256 --------------------LIEQYDLFREIYIDEIRRCQS--------------RGSYG 281
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKV 402
+GL F+SV++ F RYS ++FD D+ F TA VS ++V
Sbjct: 282 SGLDTFRSVVSGFCRYS----------------------LDFDPGDEFFVTASVSGYLRV 319
Query: 403 FDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
F+F V V P +E+ T KLSC+SW+KFSK+ +A+SDY+GI+ +WD++ Q+ +
Sbjct: 320 FEFPKAVRWSLVVWNPSLEIQTGKKLSCVSWDKFSKSCVATSDYDGIIKIWDISACQNTV 379
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHE+R WSVDFS EPS LVSG DD KV
Sbjct: 380 NYDEHERRIWSVDFSPMEPSRLVSGGDDGKV 410
>gi|395825001|ref|XP_003785734.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Otolemur
garnettii]
Length = 735
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 137 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 196
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 197 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 256
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 257 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 309
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 310 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 349
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 350 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 394
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 395 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 505
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 506 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 542
>gi|281340942|gb|EFB16526.1| hypothetical protein PANDA_009573 [Ailuropoda melanoleuca]
Length = 606
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 26 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 85
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 86 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 145
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 146 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 198
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 199 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 238
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 239 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 283
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 284 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 334
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 335 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 394
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 395 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 431
>gi|126306441|ref|XP_001373596.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2 [Monodelphis
domestica]
Length = 808
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 142 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 201
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 202 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLPNVNLMLELLVQKKKQL 261
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 262 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 314
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 315 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 354
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++A+ T + D
Sbjct: 355 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRVADDSRTASQLD----- 399
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 400 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 450
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 451 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 510
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 511 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 547
>gi|242021289|ref|XP_002431077.1| RING finger and WD repeat domain protein, putative [Pediculus
humanus corporis]
gi|212516326|gb|EEB18339.1| RING finger and WD repeat domain protein, putative [Pediculus
humanus corporis]
Length = 642
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 248/457 (54%), Gaps = 56/457 (12%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
E+ D LCPIC ++I+EA +T CGH++CY CI L K CP CG ++PNFLL
Sbjct: 42 EVSSDYLCPICFELIEEAHITRCGHTYCYSCITKALVEKPQCPRCGVSTRVTDIFPNFLL 101
Query: 108 DKLLKKTSARQISKTASPLEN---------FRQALQQGC-GVSVKEIDSLMSLLSEKKRK 157
+ L+ K + ++ S N R + G +S+ +++ ++ +L+++K
Sbjct: 102 NDLVSKHKTKLFAQELSQALNSQERVHTNGLRDFVTSGSQNLSLPDVNVMLEVLNQRKCI 161
Query: 158 MEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYS 217
+E E ++L +FL LR+Q+ ++LK++ ++ I++D+ VE
Sbjct: 162 LEAETCTAQNELLYEFLKHLRQQREEKLKQLTREVALIQKDMEEVE-------------- 207
Query: 218 VKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQ 277
S L +I+ + S +ITS S +N DG +
Sbjct: 208 --------------SILKNIEISKSNMITSDTVDSDMKSVTD-KNFTNDGYFSS------ 246
Query: 278 RKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIH 337
K ++ S N R+KR+HA F+D +CY R + +++K++
Sbjct: 247 -KKNIENITSNLAN-------RRKRMHAHFDDFVQCYFSARAK--ELLFGIDQNEKSVPD 296
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
G +GL F+ L F+RY+ LR +A L + DIF+++ IVSSIEFD+D++ FA AGV
Sbjct: 297 SSGSESGLNVFRENLVKFSRYNCLRPLAVLNYSSDIFNNSTIVSSIEFDKDNEFFAIAGV 356
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
++ IK++D+ SV+ + D+H P +EM + SK+SC+SWN + K +ASSDYEG +TVWDVT
Sbjct: 357 TKLIKIYDYGSVIRDMVDIHYPCLEMTSTSKISCVSWNFYHKGTLASSDYEGTITVWDVT 416
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q ++EHEKR WSVDF+ + ++ SGSDD +V
Sbjct: 417 TGQRTKTFQEHEKRCWSVDFNNVDTRLIASGSDDARV 453
>gi|187957396|gb|AAI58003.1| Ring finger and WD repeat domain 2 [Mus musculus]
Length = 733
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 307
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +G+ Q KK
Sbjct: 308 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGTSQTKK-------------- 347
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 348 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 392
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 393 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 443
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 444 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 503
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 504 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 540
>gi|363736531|ref|XP_426628.3| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Gallus gallus]
Length = 698
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 249/456 (54%), Gaps = 64/456 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 109 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 168
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q +Q G + + ++ ++ LL +KK+++
Sbjct: 169 ILKQKQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQL 228
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 229 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 281
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 282 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQAKK-------------- 321
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR 338
Q S L+ R+KR+ A F DL++CY R T+ D
Sbjct: 322 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRM-------TRVSDDSRT--- 361
Query: 339 EGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVS 397
+ L +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+
Sbjct: 362 ---TSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVT 418
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T
Sbjct: 419 KKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFT 478
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 479 GQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 514
>gi|26024211|ref|NP_036061.1| E3 ubiquitin-protein ligase RFWD2 [Mus musculus]
gi|55976616|sp|Q9R1A8.2|RFWD2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RFWD2; AltName:
Full=Constitutive photomorphogenesis protein 1 homolog;
Short=mCOP1; AltName: Full=RING finger and WD repeat
domain protein 2
gi|20800468|gb|AAD51094.2| constitutive photomorphogenic protein [Mus musculus]
gi|52350654|gb|AAH82804.1| Ring finger and WD repeat domain 2 [Mus musculus]
gi|148707402|gb|EDL39349.1| ring finger and WD repeat domain 2 [Mus musculus]
Length = 733
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 307
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +G+ Q KK
Sbjct: 308 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGTSQTKK-------------- 347
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 348 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 392
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 393 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 443
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 444 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 503
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 504 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 540
>gi|171846427|gb|AAI61699.1| LOC100158422 protein [Xenopus laevis]
Length = 727
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 248/453 (54%), Gaps = 62/453 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFEMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSARQISK--TASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R K P R Q G + + ++ ++ LL +KKR++E E
Sbjct: 193 ILKQKQRFDDKRLKLDPSNGHRWQIFHDLLGADQDNLDLANVNLMLQLLVQKKRQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY +
Sbjct: 253 HASQLQILMEFLIVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSPQ--------- 302
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+DS + + + S +I S+ ++ +GS Q KK
Sbjct: 303 -SEDSTVPQ--FEAPSPSHSSLIDSTEYSQSPGFSGSSQTKK------------------ 341
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 342 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMARVSDDSRTASQLD--------- 386
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 387 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 441
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 442 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 501
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 534
>gi|62859105|ref|NP_001016199.1| ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
[Xenopus (Silurana) tropicalis]
gi|89268128|emb|CAJ82063.1| ring finger and WD repeat domain 2 [Xenopus (Silurana) tropicalis]
gi|213624124|gb|AAI70678.1| ring finger and WD repeat domain 2 [Xenopus (Silurana) tropicalis]
Length = 684
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 248/453 (54%), Gaps = 62/453 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 90 DFVCPICFEMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 149
Query: 111 LKKTSARQISK--TASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R K P R Q Q G + + ++ ++ LL +KKR++E E
Sbjct: 150 ILKQKQRFDDKRLKLDPSNGHRWQIFQDLLGTDQDNLDLANVNLMLQLLVQKKRQLEAES 209
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 210 HAAQLQILMEFLIVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSPG--------- 259
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+DS + S + S +I S+ ++ +GS Q KK
Sbjct: 260 -SEDSTVPQCEAPS--PSHSSLIDSTEYSQSPGFSGSSQTKK------------------ 298
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRR-QMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 299 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMARVSDDSRTASQLD--------- 343
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 344 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 398
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 399 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNVLASSDYEGTVILWDGFTGQR 458
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 459 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 491
>gi|148235253|ref|NP_001083011.1| E3 ubiquitin-protein ligase RFWD2 [Danio rerio]
gi|141796336|gb|AAI39709.1| Zgc:163067 protein [Danio rerio]
Length = 694
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 243/452 (53%), Gaps = 55/452 (12%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA +T CGHSFCY CI L + + CP C + + N +QLYPNFL+++L
Sbjct: 95 DFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNEL 154
Query: 111 LKKTSARQISKTAS---PLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R K P Q Q G + + ++ ++ L +KK+++E E
Sbjct: 155 ILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAES 214
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL++FL R+ K ++L+++Q +L++++EDI VE M
Sbjct: 215 QAAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEE-----------------M 257
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
G S +S +D NS + S A S Q G+ +
Sbjct: 258 SG-----MYSPISDMDCNSDSTVP---QVEAPSPAPSSSIIDPSEYIQPPFGGNSQSKRQ 309
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
T +S + R+KR+ A F DL++CY R ++ D +++
Sbjct: 310 TWYNSTLAS-------RRKRLTAHFEDLEQCYFSNRM-------SRITDDSRTVNQ---- 351
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
L DF L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IK
Sbjct: 352 --LDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK 409
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF++ +V+ + D+H PV EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 410 VFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRS 469
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 470 KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 501
>gi|351706098|gb|EHB09017.1| E3 ubiquitin-protein ligase RFWD2 [Heterocephalus glaber]
Length = 734
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 247/454 (54%), Gaps = 66/454 (14%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKK 113
CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K
Sbjct: 122 CPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILK 181
Query: 114 TSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQE 161
R ++ + S R Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 182 QKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 241
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
+QIL++FL R+ K ++L++IQ DL ++EDI VE LY
Sbjct: 242 SHAAQLQILMEFLKVARRNKREQLEQIQKDLSVVEEDIKRVEEMS-GLYSP--------- 291
Query: 222 MLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 292 -VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSNQTKK----------------- 331
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREG 340
Q S L+ R+KR+ A F DL++CY R +++ T + D
Sbjct: 332 ------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSHISDDSRTASQLD-------- 376
Query: 341 YNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRR 399
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++
Sbjct: 377 ------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKK 430
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 431 IKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQ 490
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 491 RSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 524
>gi|327270275|ref|XP_003219915.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Anolis
carolinensis]
Length = 719
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 249/456 (54%), Gaps = 64/456 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 121 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 180
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 181 ILKQKQRFDEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 240
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 241 EAESHAAQLQILIEFLKVARRNKKEQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 293
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 294 ----VSEDSTVPQ--FEAPSPSPSSIIDSTEYSQPPGFSGSSQTKK-------------- 333
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR 338
Q S L+ R+KR+ A F DL++CY R T+ D
Sbjct: 334 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRM-------TRVSDDSRT--- 373
Query: 339 EGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVS 397
++ L +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+
Sbjct: 374 ---SSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVT 430
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T
Sbjct: 431 KKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFT 490
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 491 GQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 526
>gi|149058294|gb|EDM09451.1| similar to constitutive photomorphogenic protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 733
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 249/457 (54%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 307
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +G Q KK
Sbjct: 308 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGPSQTKK-------------- 347
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 348 ---------QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 392
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 393 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 443
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 444 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 503
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 504 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 540
>gi|169158558|emb|CAQ15481.1| novel protein similar to vertebrate ring finger and WD repeat
domain 2 (RFWD2, zgc:163067) [Danio rerio]
Length = 694
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 243/452 (53%), Gaps = 55/452 (12%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA +T CGHSFCY CI L + + CP C + + N +QLYPNFL+++L
Sbjct: 95 DFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNEL 154
Query: 111 LKKTSARQISKTAS---PLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R K P Q Q G + + ++ ++ L +KK+++E E
Sbjct: 155 ILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAES 214
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL++FL R+ K ++L+++Q +L++++EDI VE M
Sbjct: 215 QAAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEE-----------------M 257
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
G S +S +D NS + S A S Q G+ +
Sbjct: 258 SG-----MYSPISDMDCNSDSTVPQ---VEAPSPAPSSSIIDPSEYIQPPFGGNSQSKRQ 309
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
T +S + R+KR+ A F DL++CY R ++ D +++
Sbjct: 310 TWYNSTLAS-------RRKRLTAHFEDLEQCYFSNRM-------SRITDDSRTVNQ---- 351
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
L DF L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IK
Sbjct: 352 --LDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK 409
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF++ +V+ + D+H PV EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 410 VFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRS 469
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 470 KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 501
>gi|119611405|gb|EAW90999.1| ring finger and WD repeat domain 2, isoform CRA_a [Homo sapiens]
Length = 770
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 257/473 (54%), Gaps = 59/473 (12%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 305
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQ---NKKGDGKAQANSHG 275
+ +DS + + + S II S+ ++ +GS Q + G Q
Sbjct: 306 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQAGVQWRYLGSLQPPPPR 359
Query: 276 HQRKDSLTGSDS-------------QCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQM 321
++R LT S Q S L+ R+KR+ A F DL++CY R ++
Sbjct: 360 YKRFSCLTLPSSWDYRRLPPHLTKKQPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRI 418
Query: 322 ANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVS 380
++ T + D +FQ L+ FTRY+ +R +A L + D+++ ++IVS
Sbjct: 419 SDDSRTASQLD--------------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVS 464
Query: 381 SIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNR 440
SIEFDRD FA AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN
Sbjct: 465 SIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNL 524
Query: 441 IASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ASSDYEG V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 525 LASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 577
>gi|354477523|ref|XP_003500969.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cricetulus
griseus]
Length = 812
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 251/458 (54%), Gaps = 67/458 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-NKSDCPCCGHYLTN-NQLYPNFLLDK 109
D +CPIC +I+EA++T CGHSFCY CI L N + CP C + + N + LYPNFL+++
Sbjct: 213 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNNRCPKCNYVVDNIDHLYPNFLVNE 272
Query: 110 LLKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRK 157
L+ K R ++ + S R Q Q G + + ++ ++ LL +KK++
Sbjct: 273 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 332
Query: 158 MEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYS 217
+E E +QIL++FL R+ K ++L++IQ +L+ ++EDI VE LY
Sbjct: 333 LEAESHAAQLQILMEFLKVARRNKREQLEQIQKELNVLEEDIKRVEEMS-GLYSP----- 386
Query: 218 VKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQ 277
+ +DS + + + S II S+ ++ +G+ Q KK
Sbjct: 387 -----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPSGFSGTSQTKK------------- 426
Query: 278 RKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNII 336
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 427 ----------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD---- 471
Query: 337 HREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAG 395
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AG
Sbjct: 472 ----------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG 521
Query: 396 VSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
V+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 522 VTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG 581
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 582 FTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 619
>gi|432914419|ref|XP_004079103.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Oryzias latipes]
Length = 705
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 245/453 (54%), Gaps = 59/453 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA +T CGHSFCY CI L + + CP C + + N +QL+PNFL+++L
Sbjct: 108 DFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIVDNVDQLFPNFLVNEL 167
Query: 111 LKKTSARQISK-------TASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R K S + F+ L + + ++ ++ LL +KK+++E E
Sbjct: 168 ILKHKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAES 227
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL++FL RK K ++L ++Q +L++++EDI VE + + +
Sbjct: 228 QAAQRQILMEFLKEARKNKKEQLDQLQKELNFLEEDIKRVE----------EMSGLHSPV 277
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ + S + S II + + GS Q K+
Sbjct: 278 MEAECTVPNVETPSPGPSCSSIIEPADYTQPPGFGGSTQGKR------------------ 319
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQ-KRRQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F+DL++CY K ++ ++ T + D
Sbjct: 320 -----QTWYNSTLAS-RRKRLTAHFDDLEQCYFSSKMSRITDEGRTLNQLD--------- 364
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
DF L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 365 -----DFMECLSKFTRYNTVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 419
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KVF++ +V+ + D+H PV EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 420 KVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 479
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 480 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 512
>gi|410924241|ref|XP_003975590.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Takifugu
rubripes]
Length = 703
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 245/452 (54%), Gaps = 58/452 (12%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I+EA +T CGHSFC+ CI L + + CP C + + N +QLYPNFL+++L
Sbjct: 107 DFVCPICFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNEL 166
Query: 111 L---KKTSARQISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K+ S + K P + Q Q + + ++ ++ LL +KK+++E E
Sbjct: 167 ILKQKQMSEEKRLKLDHPNGSRWQIFQDALNPDQENLDLANVNLMLELLIQKKKQLEAES 226
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL++FL R+ K ++L+++Q +L++++EDI VE LY +
Sbjct: 227 QAAQRQILMEFLKEARRNKKEQLEQLQKELNFLEEDIKRVEEMS-GLYSPMEA------- 278
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ S + S II ++ G+ Q K+
Sbjct: 279 ---ECTVPNVEAPSPAPSCSSIIDPPDYSQPPGFGGTNQGKR------------------ 317
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
Q S L+ R+KR+ A F DL++CY + H +ES +N+
Sbjct: 318 -----QTWYNSTLAS-RRKRLTAHFEDLEQCYFSNKMS-----HITEES-RNMNQ----- 360
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
L DF L FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IK
Sbjct: 361 --LDDFMECLAKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK 418
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF++ +V+ + D+H PV EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 419 VFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQKS 478
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 479 KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 510
>gi|383420753|gb|AFH33590.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 727
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 248/453 (54%), Gaps = 62/453 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 301
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 302 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 341
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 342 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 386
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 387 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 441
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 442 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 501
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 534
>gi|410223720|gb|JAA09079.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410259874|gb|JAA17903.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410301284|gb|JAA29242.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410339121|gb|JAA38507.1| ring finger and WD repeat domain 2 [Pan troglodytes]
Length = 727
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 248/453 (54%), Gaps = 62/453 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRFEEKRFKLDHSNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 253 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 301
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 302 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 341
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 342 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 386
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 387 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 441
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 442 KVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 501
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 502 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 534
>gi|387019679|gb|AFJ51957.1| e3 ubiquitin-protein ligase RFWD2-like [Crotalus adamanteus]
Length = 709
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 250/454 (55%), Gaps = 65/454 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 116 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 175
Query: 111 LKKTSARQISKTASPLENFR----QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQE 161
+ K R + L++ Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 176 ILKQKQR-FEEKRFKLDHSNGHRWQIFQDFLGTEQDNLDLANVNLMLELLVQKKKQLEAE 234
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 235 SHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP--------- 284
Query: 222 MLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
+ +DS + + + S II S+ ++ G S GS Q KK
Sbjct: 285 -VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPGFS-GSSQTKK----------------- 323
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREG 340
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 324 ------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMTRLSDDSRTSNQLD-------- 368
Query: 341 YNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRR 399
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++
Sbjct: 369 ------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKK 422
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 423 IKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQ 482
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 483 RSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 516
>gi|397508595|ref|XP_003846253.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD2
[Pan paniscus]
Length = 749
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 253/465 (54%), Gaps = 64/465 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY S
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSPVSEDST 311
Query: 219 KLRM--------LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQ 270
+ L S+ + +++ I S II S+ ++ +GS Q KK
Sbjct: 312 VPQFEAPSPSHSLEFSSDMHRIFVNGILIIS--IIDSTEYSQPPGFSGSSQTKK------ 363
Query: 271 ANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQ 329
Q S L+ R+KR+ A F DL++CY R ++++ T
Sbjct: 364 -----------------QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTAS 405
Query: 330 ESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDD 388
+ D +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD
Sbjct: 406 QLD--------------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDC 451
Query: 389 QLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEG 448
FA AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG
Sbjct: 452 DYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEG 511
Query: 449 IVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 512 TVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 556
>gi|426332831|ref|XP_004027998.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Gorilla gorilla
gorilla]
Length = 565
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 253/465 (54%), Gaps = 64/465 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 98 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNVDHLYPNFLVNEL 157
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 158 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQL 217
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY S
Sbjct: 218 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSPVSEDST 276
Query: 219 KLRM--------LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQ 270
+ L S+ + +++ I S II S+ ++ +GS Q KK
Sbjct: 277 VPQFEAPSPSHSLEFSSDMHRIFVNGILIIS--IIDSTEYSQPPGFSGSSQTKK------ 328
Query: 271 ANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQ 329
Q S L+ R+KR+ A F DL++CY R ++++ T
Sbjct: 329 -----------------QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTAS 370
Query: 330 ESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDD 388
+ D +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD
Sbjct: 371 QLD--------------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDC 416
Query: 389 QLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEG 448
FA AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG
Sbjct: 417 DYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEG 476
Query: 449 IVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 477 TVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 521
>gi|348531414|ref|XP_003453204.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Oreochromis
niloticus]
Length = 716
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 241/453 (53%), Gaps = 59/453 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC ++I EA +T CGHSFC+ CI L + + CP C + + N +Q+YPNFL+++L
Sbjct: 119 DFVCPICFEMIDEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIIDNVDQVYPNFLVNEL 178
Query: 111 LKKTSARQISK-------TASPLENFRQALQQGC-GVSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R K S + F+ L + + ++ ++ LL +KK+++E E
Sbjct: 179 ILKQKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLLQKKKQLEAES 238
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
QIL++FL R+ K ++L+++Q +L++++EDI VE LY +
Sbjct: 239 QAAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMS-GLYSP---------V 288
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ + S + S II + G+ Q K+
Sbjct: 289 MEAECTVPNVEAPSPAPSCSSIIDQPDYNQPPGFGGAAQGKR------------------ 330
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
Q S L+ R+KR+ A F DL++CY + I EG N
Sbjct: 331 -----QTWYNSTLAS-RRKRLTAHFEDLEQCYFSSKMSR--------------ITDEGRN 370
Query: 343 AG-LADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
L DF L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 371 LNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 430
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KVF++ +V+ + D+H PV EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 431 KVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 490
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 491 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 523
>gi|440897554|gb|ELR49211.1| E3 ubiquitin-protein ligase RFWD2, partial [Bos grunniens mutus]
Length = 608
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 247/453 (54%), Gaps = 66/453 (14%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKT 114
PIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K
Sbjct: 2 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 61
Query: 115 SAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
R ++ + S R Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 62 KQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 121
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 122 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 170
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 171 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 210
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 211 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 255
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 256 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 310
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 311 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 370
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 371 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 403
>gi|449266465|gb|EMC77518.1| E3 ubiquitin-protein ligase RFWD2, partial [Columba livia]
Length = 580
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 246/452 (54%), Gaps = 64/452 (14%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKT 114
PIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K
Sbjct: 1 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 60
Query: 115 SAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
R ++ + S R Q +Q G + + ++ ++ LL +KK+++E E
Sbjct: 61 KQRSEEKRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 120
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 121 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 169
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 170 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 209
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
Q S L+ R+KR+ A F DL++CY R T+ D
Sbjct: 210 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRM-------TRVSDDSRT------T 250
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
+ L +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IK
Sbjct: 251 SQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK 310
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
V+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 311 VYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRS 370
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 371 KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 402
>gi|326924742|ref|XP_003208584.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Meleagris
gallopavo]
Length = 696
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 246/452 (54%), Gaps = 64/452 (14%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKT 114
PIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K
Sbjct: 102 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 161
Query: 115 SAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
R ++ + S R Q +Q G + + ++ ++ LL +KK+++E E
Sbjct: 162 KQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 221
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 222 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 270
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 271 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQAKK------------------ 310
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYN 342
Q S L+ R+KR+ A F DL++CY R T+ D
Sbjct: 311 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRM-------TRVSDDSRT------T 351
Query: 343 AGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
+ L +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IK
Sbjct: 352 SQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK 411
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
V+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 412 VYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRS 471
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 472 KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 503
>gi|345325443|ref|XP_001515470.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Ornithorhynchus
anatinus]
Length = 756
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 247/453 (54%), Gaps = 66/453 (14%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKT 114
PIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K
Sbjct: 162 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 221
Query: 115 SAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
R ++ + S R Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 222 KQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 281
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 282 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 330
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 331 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 370
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 371 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRVSDDSRTASQLD--------- 415
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 416 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 470
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 471 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 530
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 531 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 563
>gi|390346065|ref|XP_003726470.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 250/454 (55%), Gaps = 46/454 (10%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL-TNNQLYPNFLLD 108
D D LCPIC ++I+EA +T CGHSFC CI+ L + + CP C + +Q++PNF L+
Sbjct: 41 DNDFLCPICFEVIEEAHMTRCGHSFCQRCILRSLESSNRCPKCNFVIEKTDQIFPNFALN 100
Query: 109 KLLKKTSARQISK--------TASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
+L+ K + K T +P + ++ +Q + E++ ++ +L KKRK+E
Sbjct: 101 ELILKYRQQVEEKRLKLGPQQTGAPAPDVQEFIQDQEKWDLAEVNLMLEILVSKKRKLEM 160
Query: 161 EEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKL 220
+ +QIL DFL R++K++++ E+ + +++DI +E + + R Y+ +
Sbjct: 161 DNQVAQIQILKDFLDEARRKKLEQINELSAQMSLLEDDIKRIEER---MKKQRHAYNAMM 217
Query: 221 RMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKD 280
+ +++ N + ++S ++ ++ K DG Q +G
Sbjct: 218 SAFP---------VKAVNSNDIFLPSTS----HSETSTKVEGVKPDG-PQEGFNG----- 258
Query: 281 SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREG 340
S G Q L+ + S R+K+++ F+DLQ CY R Q P + S+
Sbjct: 259 SKNGGRQQWLDSTLAS--RRKKLYNHFDDLQSCYFSIR-QSELTPCELRSSEM------- 308
Query: 341 YNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHS-ANIVSSIEFDRDDQLFATAGVSRR 399
L F L+ FT++S +R +A L + D ++ ++IVSSIEFD+D+ FA AGV+++
Sbjct: 309 ----LDSFSENLSKFTKFSSMRPLATLSYADPYNGQSSIVSSIEFDKDNDFFAIAGVTKK 364
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
IKVF++ +V+ + D+H PV EM SK+SC++W+ + K +ASSDYEG VT+WD
Sbjct: 365 IKVFEYGTVIMDAVDIHYPVHEMACNSKISCVAWSAYHKGVLASSDYEGTVTLWDAFAGV 424
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
++EHEKR WS+DF+R +P +L SGSDD KV
Sbjct: 425 KTQSFQEHEKRCWSIDFNRMDPKLLASGSDDAKV 458
>gi|449531091|ref|XP_004172521.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 191
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 152/193 (78%), Gaps = 14/193 (7%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGV-----SELDKDMLC 55
MD+ ST +VPAVK T P + +A S +E+G ++LDKD LC
Sbjct: 1 MDDGSTGALVPAVK---------TEPVSSSISAPSIPDCSLAELGTVFEASAQLDKDFLC 51
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS 115
PICMQII++AFLTACGHSFCYMCIITHLRNKSDCPCC +LT++QL+PNFLLDKLLKKTS
Sbjct: 52 PICMQIIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTS 111
Query: 116 ARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLH 175
A QI+KTA+P+E FR ALQ+GC VS+KE+DSL+++LSEKKRKMEQEE+ RNM+IL DFLH
Sbjct: 112 AHQIAKTATPIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLH 171
Query: 176 CLRKQKVDELKEI 188
CLRKQKV EL E+
Sbjct: 172 CLRKQKVSELNEV 184
>gi|91077676|ref|XP_974586.1| PREDICTED: similar to E3 ubiquitin-ligase protein COP1 [Tribolium
castaneum]
gi|270001535|gb|EEZ97982.1| hypothetical protein TcasGA2_TC000377 [Tribolium castaneum]
Length = 662
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 247/459 (53%), Gaps = 50/459 (10%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D CP+C +I+EA++T CGH+FCY CI+ + CP C +T + ++PNFLL++L
Sbjct: 48 DFSCPVCFNLIEEAYITKCGHTFCYTCILKSIEALKRCPKCNAPVTGEDMIFPNFLLNEL 107
Query: 111 LKKTSAR---------------QISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
++K R + +A L +F Q +++ +++ ++ +L+++K
Sbjct: 108 IRKHKTRLNNFEALGLNRDSSGEFGTSADGLRDFVATESQN--LTLPDVNVMLEVLTQRK 165
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDR 215
+ +E E ++LL+FL L KQK + +I ++ I+ DI V Y
Sbjct: 166 QLLEAESCAAQNRLLLEFLKHLLKQKKERQAQIIKEIAIIEHDIEEV-------YNKLKE 218
Query: 216 YSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHG 275
K L D T S + D ++ L GSS G
Sbjct: 219 VHSKCPTLEDVERTVASAADNADVSAMKKEMIDLIDTIGSSTG----------------- 261
Query: 276 HQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNI 335
RKD T D+ S +R++R+HA F+D +CY R + + K DK
Sbjct: 262 --RKDDTTNPDAPLRLGSTSLAMRRRRMHAHFDDFVDCYFTSRSK--DLFFGKDGVDKT- 316
Query: 336 IHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATA 394
+ N GL +F+ L F+RY+ LRV+A L + D+F+++ IVSSIEFD+D++ A A
Sbjct: 317 --KTTINTGLDEFRENLIKFSRYNSLRVLATLNYSSDLFNNSTIVSSIEFDKDNEFLAIA 374
Query: 395 GVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWD 454
GV+++IKVFD+ +V+ + D+H P +EM ++SK+SC+SWN + K+ +ASSDYEG VT+WD
Sbjct: 375 GVTKKIKVFDYGAVIKDTVDIHYPCIEMLSKSKISCVSWNTYHKSILASSDYEGTVTIWD 434
Query: 455 VTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+T Q Y+EHEKR WSVDF+ + ++ SGSDD +V
Sbjct: 435 ASTGQRTKTYQEHEKRCWSVDFNEVDTRLIASGSDDARV 473
>gi|432097690|gb|ELK27802.1| E3 ubiquitin-protein ligase RFWD2 [Myotis davidii]
Length = 695
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 242/446 (54%), Gaps = 62/446 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 85 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 144
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 145 ILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 204
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 205 HAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP---------- 253
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 254 VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 293
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 294 -----QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 338
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 339 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 393
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 394 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 453
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVS 486
Y+EHEKR WSVDF+ +P +L S
Sbjct: 454 SKVYQEHEKRCWSVDFNLMDPKLLAS 479
>gi|118344224|ref|NP_001071934.1| zinc finger protein [Ciona intestinalis]
gi|92081586|dbj|BAE93340.1| zinc finger protein [Ciona intestinalis]
Length = 645
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 265/490 (54%), Gaps = 47/490 (9%)
Query: 17 MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCY 76
MK SS+ ++ + T A T T E++ D +CPIC +I+EA++T CGH+FCY
Sbjct: 1 MKRSSSGSSIKPTVPENA-TPLQPTVLGSYREMNSDFICPICFNLIEEAYMTKCGHTFCY 59
Query: 77 MCIITHLRNKSDCPCCGHYLT-NNQLYPNFLLDKLLKKTSAR--------QISKTASPLE 127
C+ L + C C L+ +++YPN+LL+ L++K + + K S L
Sbjct: 60 NCLKKSLEQSNKCTKCNSALSKTDEIYPNYLLNNLIQKKKKKMDEMLACSKRMKIDSRLW 119
Query: 128 NFRQAL-QQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELK 186
++ L + + + +ID ++ LL EK+R++ QE A + Q+LL+FL L+KQK L+
Sbjct: 120 EWQSLLATEDDDIHLADIDQMLKLLQEKRRRLVQESAVAHNQVLLEFLFELKKQKQTALE 179
Query: 187 EIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGD-DSNTRKSWLSSIDKNSSGII 245
+T+L ++ DI+ VE L R D+ + + D D N +K L +S
Sbjct: 180 RARTELSVVETDISRVEEA---LERGVDKTLLDSVVPDDNDENIKKEQLVPKPHSSEPST 236
Query: 246 TSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHA 305
+S+ + +S + Q + + SL + ++ R+ R+HA
Sbjct: 237 SSAAGSSSETSIETFN--------QLSQKSKDEESSLHRTVAK----------RRCRLHA 278
Query: 306 QFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIA 365
F+DL ECY R ++N+ L DF + L FT++S +R +A
Sbjct: 279 HFDDLHECYYNTRL-----CEIAPVEERNV-------ELLGDFSNKLRRFTQFSSIRAVA 326
Query: 366 ELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD-VHCPVVEMP 423
L + DI + ++IVSSI+FD+D FA AGV+++IKV+D+ SVVN D V+CP+V+M
Sbjct: 327 SLSYASDILNQSSIVSSIDFDKDCDHFAVAGVTKKIKVYDYESVVNNVIDGVNCPIVQMA 386
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
SK+S +SW+ + K+ +ASSDYEG V +WD T Q ++EHEKR WSVDF+ +P +
Sbjct: 387 CNSKISSISWSHYHKSWLASSDYEGSVILWDAFTGQKNKVFQEHEKRCWSVDFNSVDPRL 446
Query: 484 LVSGSDDCKV 493
L SGSDD +V
Sbjct: 447 LASGSDDARV 456
>gi|383420751|gb|AFH33589.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 711
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 236/457 (51%), Gaps = 86/457 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 193 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 252
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K +E+ + + + ED +
Sbjct: 253 EAESHAAQLQILMEFLKVARRNKREEMSGLYSP---VSEDSTVPQ--------------- 294
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ + S II S+ ++ +GS Q KK
Sbjct: 295 ---------------FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 325
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 326 ---------QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 370
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 371 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 421
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 422 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 481
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 482 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 518
>gi|391342898|ref|XP_003745752.1| PREDICTED: ubiquitin-protein ligase E3B-like [Metaseiulus
occidentalis]
Length = 1671
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 234/456 (51%), Gaps = 61/456 (13%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN----QLYPNFLLDKL 110
CP+C +I++A++T CGHSFC+ CI + ++ +CP C L + Q++PN +L+
Sbjct: 38 CPVCFGMIQDAYMTRCGHSFCHECIKQSIESRPNCPMCATELIDKDGKEQVFPNIMLNDF 97
Query: 111 LKKTSARQISKTASPLEN--FRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQ 168
+ +T + + ++P + Q + ++V +I + LL KK ++E E ++
Sbjct: 98 ISRTHREKRLRPSAPEISSCIMQLFAENKPLNVSDIQHALDLLQTKKLELESNSREMQLK 157
Query: 169 ILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSN 228
+L +FL K+K+ E+ ++ DL +I+ED L L +
Sbjct: 158 LLREFLEHFHKKKLAEVARLKHDLAFIEED---------------------LSFLNANER 196
Query: 229 TRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKK-GDGKAQANSHGHQRKDSLTGSDS 287
T + W ++ ++ +G A L G + A G QR + L S
Sbjct: 197 TDEEW---------QLLPNTPTGQGADFASGLPASACGQMASVAGGSGSQRPNGLLSS-- 245
Query: 288 QCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNI---------IHR 338
R+ R+ + F L+ECY R QM T I I +
Sbjct: 246 -----------RRFRMQSHFACLEECYFSTR-QMFRDEATAAAHPAGIGSASASGEKIEQ 293
Query: 339 EGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVS 397
GL F L+ FTRYS+LR ++ L + D+ + +IVSSIEFD+D++ FA AGV+
Sbjct: 294 PVAPRGLNRFAESLSKFTRYSQLRSLSTLNYSSDLLNGTSIVSSIEFDKDNEYFAIAGVT 353
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IK+F+++SV+ ++H P+ EM SK+SC+SWN ++K +A SDYEG VT+WD
Sbjct: 354 KKIKMFEYSSVIRSDVEMHYPIHEMVCNSKISCISWNTYNKGMLACSDYEGTVTLWDAYR 413
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q + Y+EHEKR WSVDF++ + +L SGSDD KV
Sbjct: 414 SQKLWVYQEHEKRCWSVDFNKVDTKLLASGSDDTKV 449
>gi|332219665|ref|XP_003258976.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Nomascus
leucogenys]
Length = 707
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 234/453 (51%), Gaps = 82/453 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K +E+ + + + ED +
Sbjct: 253 HAAQLQILMEFLKVARRNKREEMSGLYSP---VSEDSTVPQ------------------- 290
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ + S II S+ ++ +GS Q KK
Sbjct: 291 -----------FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 321
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 322 -----QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 366
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 367 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 421
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 422 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 481
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 482 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 514
>gi|402858321|ref|XP_003893660.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Papio
anubis]
Length = 707
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 234/453 (51%), Gaps = 82/453 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K +E+ + + + ED +
Sbjct: 253 HAAQLQILMEFLKVARRNKREEMSGLYSP---VSEDSTVPQ------------------- 290
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ + S II S+ ++ +GS Q KK
Sbjct: 291 -----------FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 321
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 322 -----QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 366
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 367 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 421
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 422 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 481
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 482 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 514
>gi|196000046|ref|XP_002109891.1| hypothetical protein TRIADDRAFT_21397 [Trichoplax adhaerens]
gi|190588015|gb|EDV28057.1| hypothetical protein TRIADDRAFT_21397 [Trichoplax adhaerens]
Length = 659
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 239/461 (51%), Gaps = 72/461 (15%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN--NQLYPNFLL 107
+ D +CPIC +I+EA++T CGHSFCY CI L S CP C +T+ + ++PN L
Sbjct: 43 NNDYICPICFGVIEEAYMTKCGHSFCYECIRRSLDENSKCPKCNFQITDKVDPIFPNITL 102
Query: 108 DKLLKKTSAR---------QISKTASPLENFRQAL------QQGCGVSVKEIDSLMSLLS 152
++L+ K R +SK A+ + R + + + + +I+ L+ LS
Sbjct: 103 NELIIKHKRRLDVANKCESSVSKAANIIRGNRLDVADILSSKSNDDMVLSDINYLLESLS 162
Query: 153 EKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRA 212
EKK+++E +Q+L +FL RK K ++L +++T L + D+ VE + + A
Sbjct: 163 EKKQQLELNSKSNRLQLLKEFLLQSRKNKEEQLNDLKTKLDLLSNDLKVVEENLVQFPTA 222
Query: 213 RDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQAN 272
+T ++ ++ G+ +S N +AG+ +G N
Sbjct: 223 ---------------STSPAFNGNV-----GVAATSNNLNSTVNAGA---NGFNGSKYVN 259
Query: 273 SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESD 332
K ++ S S+ R+KR+ + DL++CY ++ ++
Sbjct: 260 P-----KYLVSHSISE----------RRKRLSIHYEDLEDCYFSIKQSAGSK-------- 296
Query: 333 KNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFA 392
+ L F L+ FT++ R R +A L +GD+++ ++IVSSIEFDRD FA
Sbjct: 297 ---------DDSLELFMEHLSKFTKFDRFRALATLNYGDLYNHSSIVSSIEFDRDCDYFA 347
Query: 393 TAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTV 452
AGV+++IK+F+++S++ + D+H PV EM SK+SC+SW+ + K +ASSDYEG V +
Sbjct: 348 IAGVTKKIKIFEYSSIIRDAVDIHYPVTEMTCSSKISCISWSAYHKEVLASSDYEGTVAL 407
Query: 453 WDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
WD Y+EHEKR W VDF++ +P + SGSDD KV
Sbjct: 408 WDAFNGVKTRCYQEHEKRCWCVDFNKVDPKLFASGSDDAKV 448
>gi|50233824|ref|NP_001001740.1| E3 ubiquitin-protein ligase RFWD2 isoform d24 [Homo sapiens]
gi|332811252|ref|XP_001153038.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Pan
troglodytes]
gi|46241158|gb|AAS82851.1| constitutive photomorphogenic protein isoform d24 [Homo sapiens]
Length = 707
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 234/453 (51%), Gaps = 82/453 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRFEEKRFKLDHSNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K +E+ + + + ED +
Sbjct: 253 HAAQLQILMEFLKVARRNKREEMSGLYSP---VSEDSTVPQ------------------- 290
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ + S II S+ ++ +GS Q KK
Sbjct: 291 -----------FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 321
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 322 -----QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 366
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 367 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 421
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 422 KVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 481
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 482 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 514
>gi|395825003|ref|XP_003785735.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Otolemur
garnettii]
Length = 711
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 235/453 (51%), Gaps = 82/453 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 137 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 196
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 197 ILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 256
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K +E+ + + +
Sbjct: 257 HAAQLQILMEFLKVARRNKREEMSGLYSPV------------------------------ 286
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+DS + + + S II S+ ++ +GS Q KK
Sbjct: 287 -SEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 325
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 326 -----QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 370
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 371 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 425
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 426 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 485
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 486 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 518
>gi|395729376|ref|XP_003775537.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Pongo
abelii]
Length = 707
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 234/453 (51%), Gaps = 82/453 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRFEEKRFKLDHSNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K +E+ + + + ED +
Sbjct: 253 HAAQLQILMEFLKVARRNKREEMSGLYSP---VSEDSTVPQ------------------- 290
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+ + S II S+ ++ +GS Q KK
Sbjct: 291 -----------FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 321
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 322 -----QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------- 366
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 367 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 421
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 422 KVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 481
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 482 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 514
>gi|390477079|ref|XP_003735239.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Callithrix
jacchus]
Length = 707
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 234/453 (51%), Gaps = 82/453 (18%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR---QISKTASPLENFRQALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEE 162
+ K R + K + Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 193 ILKQKQRCEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 252
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRM 222
+QIL++FL R+ K +E+ + + +
Sbjct: 253 HAAQLQILMEFLKVARRNKREEMSGLYSPV------------------------------ 282
Query: 223 LGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSL 282
+DS + + + S II S+ ++ +GS Q KK
Sbjct: 283 -SEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK------------------ 321
Query: 283 TGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGY 341
Q S L+ R+KR+ A F DL++CY R +++ T + D
Sbjct: 322 -----QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSHISDDSRTASQLD--------- 366
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRI 400
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++I
Sbjct: 367 -----EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI 421
Query: 401 KVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQS 460
KV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q
Sbjct: 422 KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR 481
Query: 461 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 482 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 514
>gi|355559061|gb|EHH15841.1| hypothetical protein EGK_01992, partial [Macaca mulatta]
Length = 620
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 233/457 (50%), Gaps = 66/457 (14%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPI +I+EA++T CGHSFCY CI L + + CP C + N + LYPNFL+++L
Sbjct: 22 DFVCPIFFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVGDNIDHLYPNFLVNEL 81
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + I+ ++ LL +KK+++
Sbjct: 82 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANINLMLELLVQKKKQL 141
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K E LY
Sbjct: 142 EAESHAAQLQILMEFLKVARRNK-REXXXXXXXXXXXXXXXXXXXXEMSGLYSP------ 194
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ ++ +GS Q KK
Sbjct: 195 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-------------- 234
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 235 ---------QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 279
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGV 396
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV
Sbjct: 280 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 330
Query: 397 SRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVT 456
+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD
Sbjct: 331 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 390
Query: 457 TQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 391 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 427
>gi|338724555|ref|XP_001493699.3| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Equus caballus]
Length = 570
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 232/448 (51%), Gaps = 86/448 (19%)
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR-- 117
+I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE 60
Query: 118 ----QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
++ + S R Q LQ G + + ++ ++ LL +KK+++E E +
Sbjct: 61 EKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDS 227
QIL++FL R+ K +E+ + + + +DS
Sbjct: 121 QILMEFLKVARRNKREEMSGLYSPV-------------------------------SEDS 149
Query: 228 NTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDS 287
+ + + S II S+ ++ +GS Q KK
Sbjct: 150 TVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK----------------------- 184
Query: 288 QCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLA 346
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 185 QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD-------------- 229
Query: 347 DFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDF 405
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++
Sbjct: 230 EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEY 289
Query: 406 ASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYE 465
+V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+
Sbjct: 290 GTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQ 349
Query: 466 EHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 350 EHEKRCWSVDFNLMDPKLLASGSDDAKV 377
>gi|355716213|gb|AES05541.1| ring finger and WD repeat domain 2 [Mustela putorius furo]
Length = 577
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 232/435 (53%), Gaps = 66/435 (15%)
Query: 74 FCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QISKTASPL 126
FCY CI L + + CP C + + N + LYPNFL+++L+ K R ++ + S
Sbjct: 1 FCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSST 60
Query: 127 ENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
R Q Q G + + ++ ++ LL +KK+++E E +QIL++FL R+
Sbjct: 61 NGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRN 120
Query: 181 KVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKN 240
K ++L++IQ +L ++EDI VE LY + +DS + + +
Sbjct: 121 KREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----------VSEDSTVPQ--FEAPSPS 167
Query: 241 SSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRK 300
S II S+ ++ +GS Q KK Q S L+ R+
Sbjct: 168 HSSIIDSTEYSQPPGFSGSSQTKK-----------------------QPWYNSTLA-SRR 203
Query: 301 KRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYS 359
KR+ A F DL++CY R ++++ T + D +FQ L+ FTRY+
Sbjct: 204 KRLTAHFEDLEQCYFSTRMSRISDDTRTASQLD--------------EFQECLSKFTRYN 249
Query: 360 RLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCP 418
+R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H P
Sbjct: 250 SVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYP 309
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+
Sbjct: 310 ENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNL 369
Query: 479 TEPSMLVSGSDDCKV 493
+P +L SGSDD KV
Sbjct: 370 MDPKLLASGSDDAKV 384
>gi|410985932|ref|XP_003999269.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Felis catus]
Length = 570
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 233/448 (52%), Gaps = 86/448 (19%)
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR-- 117
+I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K + R
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQNQRFE 60
Query: 118 ----QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
++ + S R Q Q G + + ++ ++ LL +KK+++E E +
Sbjct: 61 EKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDS 227
QIL++FL R+ K +E+ + + + ED
Sbjct: 121 QILMEFLKVARRNKREEMSGLYSP---VSED----------------------------- 148
Query: 228 NTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDS 287
+T + + +SS I ++ N G S GS Q KK
Sbjct: 149 STVPQFEAPSPSHSSIIDSTEFNQPPGFS-GSSQTKK----------------------- 184
Query: 288 QCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLA 346
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 185 QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD-------------- 229
Query: 347 DFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDF 405
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++
Sbjct: 230 EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEY 289
Query: 406 ASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYE 465
+V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+
Sbjct: 290 GTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQ 349
Query: 466 EHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 350 EHEKRCWSVDFNLMDPKLLASGSDDAKV 377
>gi|426239933|ref|XP_004013871.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Ovis aries]
Length = 564
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 225/442 (50%), Gaps = 86/442 (19%)
Query: 67 LTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QI 119
+T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R ++
Sbjct: 1 MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKL 60
Query: 120 SKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDF 173
+ S R Q Q G + + ++ ++ LL +KK+++E E +QIL++F
Sbjct: 61 DHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF 120
Query: 174 LHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSW 233
L R+ K +E+ + + + +DS +
Sbjct: 121 LKVARRNKREEMSGLYSPV-------------------------------SEDSTVPQ-- 147
Query: 234 LSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQS 293
+ + S II S+ ++ +GS Q KK Q S
Sbjct: 148 FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-----------------------QPWYNS 184
Query: 294 GLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVL 352
L+ R+KR+ A F DL++CY R ++++ T + D +FQ L
Sbjct: 185 TLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECL 229
Query: 353 TTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNE 411
+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ +
Sbjct: 230 SKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQD 289
Query: 412 PADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRA 471
D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR
Sbjct: 290 AVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRC 349
Query: 472 WSVDFSRTEPSMLVSGSDDCKV 493
WSVDF+ +P +L SGSDD KV
Sbjct: 350 WSVDFNLMDPKLLASGSDDAKV 371
>gi|403266440|ref|XP_003925391.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Saimiri boliviensis
boliviensis]
Length = 564
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 225/442 (50%), Gaps = 86/442 (19%)
Query: 67 LTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QI 119
+T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R ++
Sbjct: 1 MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRCEEKRFKL 60
Query: 120 SKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDF 173
+ S R Q Q G + + ++ ++ LL +KK+++E E +QIL++F
Sbjct: 61 DHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF 120
Query: 174 LHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSW 233
L R+ K +E+ + + + +DS +
Sbjct: 121 LKVARRNKREEMSGLYSPV-------------------------------SEDSTVPQ-- 147
Query: 234 LSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQS 293
+ + S II S+ ++ +GS Q KK Q S
Sbjct: 148 FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-----------------------QPWYNS 184
Query: 294 GLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVL 352
L+ R+KR+ A F DL++CY R ++++ T + D +FQ L
Sbjct: 185 TLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECL 229
Query: 353 TTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNE 411
+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ +
Sbjct: 230 SKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQD 289
Query: 412 PADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRA 471
D+H P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR
Sbjct: 290 AVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRC 349
Query: 472 WSVDFSRTEPSMLVSGSDDCKV 493
WSVDF+ +P +L SGSDD KV
Sbjct: 350 WSVDFNLMDPKLLASGSDDAKV 371
>gi|452821129|gb|EME28163.1| E3 ubiquitin-protein ligase RFWD2 [Galdieria sulphuraria]
Length = 541
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 219/445 (49%), Gaps = 74/445 (16%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
+K + CPIC +K++F+T C H+FCY CI HL KS CP CG YL + L PN+
Sbjct: 28 EKLVECPICFTTLKDSFVTPCQHTFCYECISKHLETKSSCPSCGRYLVMSLLKPNY---- 83
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQI 169
E+D + L E+KRK +
Sbjct: 84 ---------------------------------EVDEAVKLYEERKRKKRSRSNSYPLAA 110
Query: 170 LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNT 229
L L C +VD L +L + ED+ + + R + D++ + L +
Sbjct: 111 DLQQLMC----QVDSLS--AEELTALIEDLKSKKEQREKTEKREDQF-LLFEFLQQAISK 163
Query: 230 RKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQC 289
++S + +++ ++ S S + LQ K + + H H
Sbjct: 164 KESTVKRLEEELQVLLQS--RNYLESESPLLQEWKDNWLEE---HMH------------- 205
Query: 290 LNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADF 348
N S L + R++R+ F+ YL+ R + +Q +S+ + I A L F
Sbjct: 206 -NSSSLHMNRRQRIMEHFD-----YLEDRFYSLHSQERKSSDSETSCI-----GAVLDTF 254
Query: 349 QSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASV 408
+ L F++YS L A L+H +I + +NI+SSIEFDRD + ATAGV++RI++F+F S+
Sbjct: 255 REDLYKFSKYSGLHCKAILKHAEIPNISNIISSIEFDRDSEYIATAGVTKRIRIFEFGSI 314
Query: 409 VNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHE 468
+ D H PV EM + +KLSCLSWN + N + SSDYEG+VT+WD T Q++ E+EEHE
Sbjct: 315 LESVLDTHYPVKEMVSSTKLSCLSWNSYIHNHLLSSDYEGVVTLWDAITGQTLNEFEEHE 374
Query: 469 KRAWSVDFSRTEPSMLVSGSDDCKV 493
KR W VDFS+ EP+ S SDD KV
Sbjct: 375 KRIWCVDFSKVEPTRFASASDDGKV 399
>gi|321456923|gb|EFX68020.1| hypothetical protein DAPPUDRAFT_330505 [Daphnia pulex]
Length = 690
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 224/446 (50%), Gaps = 70/446 (15%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDK 109
D D+LCP+C+ ++ E ++T CGHSFC+ CI+ L S CP C L ++ P+ +
Sbjct: 114 DSDLLCPVCLDMMSEPYVTTCGHSFCHGCIVRSLELASKCPKCSGPLDSSGRNPSVFPNV 173
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQI 169
L +Q K Q + +K+ +L+ R E R ++
Sbjct: 174 TLNALITKQKKKLVE---------SQDGNILMKDFTTLLD-----TRDWHPSELVRMQEV 219
Query: 170 LLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNT 229
LL RKQ + + T+ + E + ++ + + R + +L +L D N
Sbjct: 220 LL------RKQCDLDGERKLTEAQLLNEFLQQLKTKKNNELRNVQQ---ELEVLDKDLN- 269
Query: 230 RKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQC 289
+ +LN S+A ++N + + A +S
Sbjct: 270 ---------------MAQTLNPGIDSAAIKVENYEVNETAFNSS---------------- 298
Query: 290 LNQSGLSV-VRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADF 348
+ + LS+ R+ R+H F DL+ Y R N +++S L DF
Sbjct: 299 IASTPLSIGQRRVRMHQHFEDLEGKYWALRNNRLNGEEEEKKS-------------LLDF 345
Query: 349 QSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
QS L TR+SRLR +A L +G ++ ++A+IVSSIEFDRD FA AGV++RIKV+D+A
Sbjct: 346 QSNLNQLTRWSRLRPLANLSYGSELLNTAHIVSSIEFDRDADFFAIAGVTKRIKVYDYAV 405
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
VV + D+H PV+EM SK+SC+SW+ + K+ +ASSDYEG V+VWD + + ++EH
Sbjct: 406 VVRDAVDLHYPVMEMVAGSKISCISWSAYHKSVLASSDYEGSVSVWDASVGTRLRVFQEH 465
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
EKR WSVDF+R + ++ SGSDD +V
Sbjct: 466 EKRCWSVDFNRMDSHLMASGSDDSRV 491
>gi|281205537|gb|EFA79727.1| hypothetical protein PPL_07418 [Polysphondylium pallidum PN500]
Length = 829
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 137/196 (69%), Gaps = 4/196 (2%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
+K+++ +DLQ CY Q +P ES+ + GL F L+ FTRY
Sbjct: 450 KKRKIDTHLDDLQSCYFSAYDQ---EPEPPLESNTESNQPKKLGKGLLSFSRNLSKFTRY 506
Query: 359 SRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASV-VNEPADVHC 417
+ RVI L++GD+ ++++IVSSIEFD+DD+ FATAGV+++IKVF++A + + + D+H
Sbjct: 507 NDFRVITTLKYGDLNNTSSIVSSIEFDKDDEFFATAGVTKKIKVFEYAQLNIRDHVDIHV 566
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
P+ EM RSK+SCLSWN + K++IASSDYEGI+T+WDV T Q VM EEHEKR WSVDFS
Sbjct: 567 PIKEMTCRSKISCLSWNTYIKSQIASSDYEGIITLWDVNTGQDVMSMEEHEKRVWSVDFS 626
Query: 478 RTEPSMLVSGSDDCKV 493
RT+P+ L SGSDD +V
Sbjct: 627 RTDPTQLASGSDDTRV 642
>gi|170033008|ref|XP_001844371.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
gi|167873485|gb|EDS36868.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
Length = 685
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 238/467 (50%), Gaps = 54/467 (11%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT-NNQLYPNFLLDKL 110
D LCPIC +I EA +T CGH+FC+ CII + CP C + LT ++ + PN+LL+ L
Sbjct: 57 DFLCPICFDVITEAHITKCGHTFCHHCIIKSIEVTKKCPKCNYTLTSHDSIVPNYLLNDL 116
Query: 111 LKKTSARQ----ISKTAS-----PLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
+ K ++ S TAS L++F + + +S+ +++ ++ +L+++K +E E
Sbjct: 117 ITKFKLKKKGTDSSNTASGDSADTLKHFLASESKK--LSLSDVNVMLEILNQRKLLLEAE 174
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLR 221
++L +FL L +QK + ++ ++ IK DI VE+ ++ +
Sbjct: 175 SCAAQNRLLHEFLKHLLQQKEQQQLQVANEIALIKNDITDVEKILKEVQSSCPTVEEVEN 234
Query: 222 MLGDDSN-----TRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGH 276
+ D+ + +K + IDK + + S+ R SS K D + +
Sbjct: 235 SVKDEKDEHVVAIKKEIIQIIDKIDTITVPSN---RSESSNEGFNLYKNDPSSSS----- 286
Query: 277 QRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQ--------MANQPHTK 328
+ RK+R++ F+D +CY R + +
Sbjct: 287 -------------------FMARKQRMYQHFDDFVQCYFAARSEELYFGKDRSLSSGSLG 327
Query: 329 QESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRD 387
+ I L F+ L F++YS LR +A L + + + + IVSSIEFD+D
Sbjct: 328 TSTPTRSIDTTRSTKSLDTFRENLIKFSKYSALRPLATLNYSCESNYVSTIVSSIEFDKD 387
Query: 388 DQLFATAGVSRRIKVFDFASVVNEPA-DVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDY 446
+ FA AGV++RIK+FD+ S + + + D++ P+ EM SK+SC+ WN + K +ASSDY
Sbjct: 388 SEYFAIAGVTKRIKIFDYYSAIRDASVDINYPINEMVCNSKISCVIWNNYFKEILASSDY 447
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EGIV+VWDV+T+ +EEH+KR W VDF+ + +L SGSDD +V
Sbjct: 448 EGIVSVWDVSTKTRTKAFEEHDKRCWCVDFNEVDTRLLASGSDDARV 494
>gi|380798359|gb|AFE71055.1| E3 ubiquitin-protein ligase RFWD2 isoform a, partial [Macaca
mulatta]
Length = 531
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 196/357 (54%), Gaps = 53/357 (14%)
Query: 139 VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKED 198
+ + ++ ++ LL +KK+++E E +QIL++FL R+ K ++L++IQ +L ++ED
Sbjct: 33 LDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEED 92
Query: 199 INAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAG 258
I VE LY + +DS + + + S II S+ ++ +G
Sbjct: 93 IKRVEEMS-GLYSP----------VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSG 139
Query: 259 SLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR 318
S Q KK Q S L+ R+KR+ A F DL++CY R
Sbjct: 140 SSQTKK-----------------------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTR 175
Query: 319 -RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSA 376
++++ T + D +FQ L+ FTRY+ +R +A L + D+++ +
Sbjct: 176 MSRISDDSRTASQLD--------------EFQECLSKFTRYNSVRPLATLSYASDLYNGS 221
Query: 377 NIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKF 436
+IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ +
Sbjct: 222 SIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSY 281
Query: 437 SKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 282 HKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 338
>gi|168021105|ref|XP_001763082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685565|gb|EDQ71959.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 756
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 194/365 (53%), Gaps = 55/365 (15%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
++E++ ++ EE E ++LL+FL ++ QK + +++ D+ + DI VER R+ L
Sbjct: 230 IAERQAAVQLEEKEAESEVLLEFLLRMQNQKQENARKLAQDVSRLSADIQEVERRRLALK 289
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQ 270
+ R + G++S R+ +G+ +LQ +KG +
Sbjct: 290 KKRGPITK-----GENSGQRRI---------TGV--------------NLQERKGILGKR 321
Query: 271 ANSHGHQRKDSLTGSDS--QCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMA------ 322
+ +D + G + C + G + + R + FN L++ Y +
Sbjct: 322 PHP-----EDGIGGREKGIACTDGRGKMLSKSARFMSNFNHLEKVYFSMNWRAGAPGMGM 376
Query: 323 NQPHTK-----------QESDKNIIHREGYNA---GLADFQSVLTTFTRYSRLRVIAELR 368
++P ++ DK I R G + L F L + RYSR V A LR
Sbjct: 377 SKPSSRLGAQSLSIGCASNDDKKGISRAGEDNEEDWLGCFFDSLCKYARYSRFEVKATLR 436
Query: 369 HGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKL 428
HGD+ ++AN+V S+ FDRD++ FATAGV +RIKVF+ +++NE D+H PVVEMP RSKL
Sbjct: 437 HGDLLNTANMVCSLSFDRDEEYFATAGVCKRIKVFECDTILNEHVDIHYPVVEMPCRSKL 496
Query: 429 SCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGS 488
S + WN + K+ +AS DYEG+V +WD + + +YEEHEKRAWSVDFS+ +P+ L SGS
Sbjct: 497 SSVCWNGYIKSHLASCDYEGVVQLWDANVPRVLRDYEEHEKRAWSVDFSKADPTKLASGS 556
Query: 489 DDCKV 493
DD V
Sbjct: 557 DDGTV 561
>gi|330793214|ref|XP_003284680.1| hypothetical protein DICPUDRAFT_45662 [Dictyostelium purpureum]
gi|325085378|gb|EGC38786.1| hypothetical protein DICPUDRAFT_45662 [Dictyostelium purpureum]
Length = 629
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 127/169 (75%), Gaps = 4/169 (2%)
Query: 325 PHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEF 384
P+T SD I + GL +F L FTR++ +VIA L++GD+F++++IVSSIEF
Sbjct: 278 PYTNINSD---IEQLKVGRGLLNFSKNLLKFTRFNEFKVIATLKYGDLFNTSSIVSSIEF 334
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
DRD + FATAGV+++IKVF+F S + + DVH PV EM RSK+SCLSWN + K++IASS
Sbjct: 335 DRDQEFFATAGVTKKIKVFEF-SQIRDNVDVHTPVREMICRSKISCLSWNTYIKSQIASS 393
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
DYEGI+++WD T QS+M +EEHEKR WSVDFSRT+P+ L SGSDD KV
Sbjct: 394 DYEGIISLWDSNTGQSIMTFEEHEKRVWSVDFSRTDPTQLASGSDDTKV 442
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
+IKE F+T CGHSFCY CI HL N CP C +LT Q++PNF L+ ++K +
Sbjct: 1 MIKEPFITKCGHSFCYQCITQHLTNSKTCPFCMMFLTREQIFPNFALNSFVQKVGIKTNL 60
Query: 121 KTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQ 180
+ + R L S+++I+ +++ L EKK+ +E ++ + ILLDFL + Q
Sbjct: 61 LPSPSFKQLRNTLTNE-KFSLQDINLMVNTLLEKKKSLELQDQQVEFDILLDFLQKTKSQ 119
Query: 181 KVDELKEIQTDLHYIKEDINAVERHR 206
K+++ K+++ + Y++ DI A+E +
Sbjct: 120 KMEDFKQLKRQIDYLENDIKAIEHQK 145
>gi|344240054|gb|EGV96157.1| E3 ubiquitin-protein ligase RFWD2 [Cricetulus griseus]
Length = 556
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 217/434 (50%), Gaps = 87/434 (20%)
Query: 76 YMCIITHLR-NKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QISKTASPLE 127
Y CI L N + CP C + + N + LYPNFL+++L+ K R ++ + S
Sbjct: 1 YKCIHQSLEDNNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTN 60
Query: 128 NFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQK 181
R Q Q G + + ++ ++ LL +KK+++E E +QIL++FL R+ K
Sbjct: 61 GHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNK 120
Query: 182 VDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNS 241
+E+ + + + +DS + + +
Sbjct: 121 REEMSGLYSPV-------------------------------SEDSTVPQ--FEAPSPSH 147
Query: 242 SGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKK 301
S II S+ ++ +G+ Q KK Q S L+ R+K
Sbjct: 148 SSIIDSTEYSQPSGFSGTSQTKK-----------------------QPWYNSTLAS-RRK 183
Query: 302 RVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSR 360
R+ A F DL++CY R ++++ T + D +FQ L+ FTRY+
Sbjct: 184 RLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTRYNS 229
Query: 361 LRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPV 419
+R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H P
Sbjct: 230 VRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPE 289
Query: 420 VEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRT 479
EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+
Sbjct: 290 NEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLM 349
Query: 480 EPSMLVSGSDDCKV 493
+P +L SGSDD KV
Sbjct: 350 DPKLLASGSDDAKV 363
>gi|119611408|gb|EAW91002.1| ring finger and WD repeat domain 2, isoform CRA_d [Homo sapiens]
Length = 530
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 199/365 (54%), Gaps = 46/365 (12%)
Query: 147 LMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHR 206
++ LL +KK+++E E +QIL++FL R+ K ++L++IQ +L ++EDI VE
Sbjct: 1 MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS 60
Query: 207 IDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQ---NK 263
LY + +DS + + + S II S+ ++ +GS Q
Sbjct: 61 -GLYSP----------VSEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQAGVQW 107
Query: 264 KGDGKAQANSHGHQRKDSLTGSDS-------------QCLNQSGLSVVRKKRVHAQFNDL 310
+ G Q ++R LT S Q S L+ R+KR+ A F DL
Sbjct: 108 RYLGSLQPPPPRYKRFSCLTLPSSWDYRRLPPHLTKKQPWYNSTLAS-RRKRLTAHFEDL 166
Query: 311 QECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRH 369
++CY R ++++ T + D +FQ L+ FTRY+ +R +A L +
Sbjct: 167 EQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTRYNSVRPLATLSY 212
Query: 370 G-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKL 428
D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H P EM SK+
Sbjct: 213 ASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKI 272
Query: 429 SCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGS 488
SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+ +P +L SGS
Sbjct: 273 SCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGS 332
Query: 489 DDCKV 493
DD KV
Sbjct: 333 DDAKV 337
>gi|320166226|gb|EFW43125.1| photoregulatory zinc-finger protein COP1 [Capsaspora owczarzaki
ATCC 30864]
Length = 731
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 222/461 (48%), Gaps = 88/461 (19%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
+++ +D++CP+C+Q++ F++ CGH+ G LT Q++PN L
Sbjct: 142 ADIPEDLVCPVCLQLMAAPFMSTCGHNILQ---------------GGPPLT--QMFPNAL 184
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGC---GVSVKEIDSLMSLLSEKKRKMEQEEA 163
+L + S L N LQQ C S+ +I +++ L K+R++ E
Sbjct: 185 AQRLAE-----------SYLRNPLSQLQQLCTKSSWSLPDITAVLQTLENKRRQLVASEE 233
Query: 164 ERNMQILLDFL-HCLRKQKVD------ELKEIQTDLHYIKEDINAVERHRIDLYRARDRY 216
++L FL R+ KV+ +L+ IQ DL E N++ +
Sbjct: 234 SIETELLHTFLTEAERRTKVEVLQLANQLRTIQADLQATTERRNSLRQLEASEVGDSGPP 293
Query: 217 SVKLRMLGDDSNTRKSWL---SSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANS 273
S + R+ + +S S +N SG I S +A S ++Q
Sbjct: 294 SKRSRLADEVPEPTESAAVADGSQPRNPSGPIALSGSAAFTSLVSAVQ------------ 341
Query: 274 HGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDK 333
K + S +Q RK RV+ +F DL + Y
Sbjct: 342 -----KPAYMKSLAQ----------RKNRVYTEFPDLLQHYFDA---------------- 370
Query: 334 NIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFAT 393
HR + F + L+ FTRY V+ LR+GD + ++I+SSIEFD+D+++F+T
Sbjct: 371 ---HRRTPGRAVNRFSTSLSMFTRYDTANVLTTLRYGDADNFSSIISSIEFDKDEKVFST 427
Query: 394 AGVSRRIKVFDFASVVNEP-ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTV 452
AGV ++IK+FDF + N DVH PV+E+ K+S SWN F ++ +A SDY G V +
Sbjct: 428 AGVQKKIKIFDFETFANTTYVDVHYPVLEITLEHKISSQSWNPFMQSVLAVSDYSGAVGL 487
Query: 453 WDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
WDV T Q++ ++EHEKRAW+VDF++T+P+ L SGSDD +V
Sbjct: 488 WDVNTGQNLRIFQEHEKRAWTVDFAQTDPTRLASGSDDSRV 528
>gi|168010514|ref|XP_001757949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690826|gb|EDQ77191.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 184/366 (50%), Gaps = 57/366 (15%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
++E++ + EE E ++L +FL ++ QK + +++ D+ + DI VER R+ L
Sbjct: 277 IAERQAAVLLEEKEAESEVLFEFLLRMQNQKQENARKLAHDVSRLSADIQEVERRRLALK 336
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGS-LQNKKG-DGK 268
+ R G IT N+ G+ +Q +KG GK
Sbjct: 337 KKR-----------------------------GPITKVENSGQRRVTGANMQERKGLQGK 367
Query: 269 AQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTK 328
Q G ++ C++ G + + R + FN L++ Y + A P
Sbjct: 368 RQHPEDGVGFREKGIA----CIDGRGKILSKSARFMSNFNHLEKVYFSMNWR-ACAPGMG 422
Query: 329 QESDKNIIHREGYNAG---------------------LADFQSVLTTFTRYSRLRVIAEL 367
+ EG + G L F L + RYSR V A L
Sbjct: 423 MSKSSSRQGAEGLSIGCAASDELKATSRSGEENEEDWLGCFFDSLCKYARYSRFEVKATL 482
Query: 368 RHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSK 427
RHGD+ ++AN+V S+ FDRD++ FATAGV +RIKVF+ +++NE D+H PVVE+P RSK
Sbjct: 483 RHGDLLNTANMVCSLSFDRDEEYFATAGVCKRIKVFECDTILNEHVDIHYPVVEIPCRSK 542
Query: 428 LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
LS + WN + K+ +AS DYEG+V +WD + + + EYEEHEKRAWSVDFS+ P+ L SG
Sbjct: 543 LSSVCWNGYIKSHLASCDYEGVVQLWDASNNRVLKEYEEHEKRAWSVDFSKAYPTKLASG 602
Query: 488 SDDCKV 493
SDD V
Sbjct: 603 SDDGTV 608
>gi|384253047|gb|EIE26522.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]
Length = 533
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 136/222 (61%), Gaps = 30/222 (13%)
Query: 299 RKKRVHAQFNDLQECYLQKRR---------QMANQPHTKQESDKNIIHREGYNA------ 343
RK+RV +QF+DLQ CY++ RR A++ E + ++ NA
Sbjct: 123 RKRRVVSQFDDLQNCYMKLRRGESGSEGQRDGASEEGDAAEGMREMVVGGNVNARKLELV 182
Query: 344 --------------GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQ 389
GLA+F +L+ FT S+L+V+AEL A I+SSIEFDRD
Sbjct: 183 QAGEGAVGPVLAPDGLAEFSRMLSVFTHCSKLKVVAELPRASARQQAAILSSIEFDRDRA 242
Query: 390 LFATAGVSRRIKVFDFASVVNEP-ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEG 448
+FATAGVS+RI +FD+A+V+ P HCP E+ TRSKLSCLSWNK+ ++ I SSDYEG
Sbjct: 243 VFATAGVSKRISLFDYANVLAHPHVQQHCPAAELVTRSKLSCLSWNKYVRSHIISSDYEG 302
Query: 449 IVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
VT+WDV TQ +V EYE H+KR WSVD+S +P + VSGSDD
Sbjct: 303 CVTLWDVDTQATVNEYEAHDKRIWSVDYSTADPLLFVSGSDD 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Query: 59 MQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQ 118
M ++++ F+TACGH+FC C+ THL +S CP C YL + +PNF+L K++ + +A +
Sbjct: 1 MSLLRDPFVTACGHTFCCSCLTTHLNARSTCPSCAQYLIKDSTFPNFMLSKVVARAAAAE 60
Query: 119 ISKTASPLENFRQALQQG-CGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
+ + + +++ C +S++++++L+ L EK+ MEQ+EAE
Sbjct: 61 EREKKPVAQKMVEDIREDRCKLSLQDVNTLLQCLWEKREAMEQQEAE 107
>gi|66806049|ref|XP_636746.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
gi|60465153|gb|EAL63252.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
Length = 970
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 119/150 (79%), Gaps = 1/150 (0%)
Query: 344 GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
GL F L FT+Y+ +V+A L++GD+F++++IVSSIEFDRD++ FATAGV+++IK+F
Sbjct: 635 GLLSFSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVSSIEFDRDEEYFATAGVTKKIKIF 694
Query: 404 DFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVME 463
+F S + + +VH PV EM RSK+SCLSWN + K++IASSDYEGI+++WD T Q++M
Sbjct: 695 EF-SQIRDNVEVHSPVKEMTCRSKISCLSWNTYIKSQIASSDYEGIISLWDANTGQNIMT 753
Query: 464 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EEHEKR WSVDFSRT+P+ L SGSDD +V
Sbjct: 754 LEEHEKRVWSVDFSRTDPTQLASGSDDTRV 783
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
E+D+ +LCP+C +IKE F++ CGHSFCY CII HL CP C YLT Q++PNF L
Sbjct: 149 EVDELLLCPVCNDMIKEPFISKCGHSFCYQCIIIHLSKSKTCPICMVYLTREQIFPNFAL 208
Query: 108 DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNM 167
+K ++K + ++ FR L +S+ +I+ ++S L EKK+ +E + +
Sbjct: 209 NKFVEKIGVKSSLLPTPTVKQFRNTLSNE-NLSLHDINLMVSTLLEKKKNLEVHDQQVEY 267
Query: 168 QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHR--------IDLYRARDRYSVK 219
ILLDFL R QK++ K+++ + Y++ DI A+E + DL RD ++
Sbjct: 268 DILLDFLQKTRSQKMETFKQLKRQISYLENDIKAIEHQKDISESLSNGDLDMLRD--ALF 325
Query: 220 LRMLGDDSN 228
+ GDDSN
Sbjct: 326 IGKGGDDSN 334
>gi|384487260|gb|EIE79440.1| hypothetical protein RO3G_04145 [Rhizopus delemar RA 99-880]
Length = 623
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 218/462 (47%), Gaps = 103/462 (22%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
S + + ++D+++ CPIC I+KE T CGHSFCY CI ++ + +CP
Sbjct: 61 SLAYANLDKVDEELNCPICHDIMKEVIATTCGHSFCYECICEQIKYQPECP--------- 111
Query: 100 QLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSE-KKRKM 158
LL++L + + Q+ + ++P + + D + +LL K ++
Sbjct: 112 ------LLNRLAELRT--QVVEKSAP---------------IYKSDPMEALLRRIKNDRL 148
Query: 159 EQEEAERNMQILLD-FLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYS 217
+ N D FL L+ + ++ + I D++ ++ R D + D+ +
Sbjct: 149 SIATSMANSLTYADAFLIRLKNRNDTTIQNLILQNKLILSDLDMLDIARRDQQQPEDQST 208
Query: 218 VKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQ 277
+ M DD NTR A +++++ DG
Sbjct: 209 EEAEM--DDGNTR-------------------------VASRVRSEEADG---------- 231
Query: 278 RKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIH 337
LN LS R+ +F+DL+E Y K MA P +N+I
Sbjct: 232 ------------LNDRSLS----NRMDERFHDLKELYYSK---MAPDP-------ENVIL 265
Query: 338 REGYNAG-LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGV 396
E L F SVL TRY L V+ L + D HS +IVSSIEFD+DD+LFA G+
Sbjct: 266 DEDERCSRLESFSSVLYDVTRYGTLDVLDTLHYADTTHSTSIVSSIEFDKDDELFAVGGI 325
Query: 397 SRRIKVFDFASVVNEP-----ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVT 451
+ IK++DF P A +HCPV + +K+SCLSW+ + K+++AS+DY+G++
Sbjct: 326 LKDIKIYDFRLTCRGPNEARTATIHCPVRRIKCDNKISCLSWSSYIKSQVASADYQGVIN 385
Query: 452 VWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
VWDVTT Q + EH+KRAWSVD S P+++ SGSDD V
Sbjct: 386 VWDVTTGQKTSSFVEHKKRAWSVDTSARNPNLIASGSDDTSV 427
>gi|307110243|gb|EFN58479.1| hypothetical protein CHLNCDRAFT_6949, partial [Chlorella
variabilis]
Length = 641
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 137/210 (65%), Gaps = 11/210 (5%)
Query: 295 LSVVR--KKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREG-------YNAGL 345
LS++R K+R+ +QF+DLQ+ YLQ R + + GL
Sbjct: 244 LSLLRNKKRRIASQFDDLQQSYLQLRAAQLRRTQAAAAGGNGAGEAAADGAVGALIDEGL 303
Query: 346 ADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDF 405
+F +L+ TR ++++++AE++ + S+ IVSS+EFD++ LFATAGVS+RI +F+F
Sbjct: 304 QEFSRLLSVITRCNKIKLVAEVQRPPLRQSSAIVSSLEFDKEGALFATAGVSKRISIFEF 363
Query: 406 ASVVNEPAD--VHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVME 463
ASVV A +H PVVE+ +RSKLSCLSWNK+ + IASSDYEG+V+VWDV T ++E
Sbjct: 364 ASVVPSAASPGLHTPVVELVSRSKLSCLSWNKYIQAHIASSDYEGVVSVWDVGTSGQLLE 423
Query: 464 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
YE H KR WSVDF +P++L SGSDDC V
Sbjct: 424 YEAHSKRIWSVDFCEADPTLLASGSDDCSV 453
>gi|302805344|ref|XP_002984423.1| hypothetical protein SELMODRAFT_181056 [Selaginella moellendorffii]
gi|300147811|gb|EFJ14473.1| hypothetical protein SELMODRAFT_181056 [Selaginella moellendorffii]
Length = 731
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 187/355 (52%), Gaps = 60/355 (16%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
L+E++ ++ EE E + +LL+FL ++++K + +++ D+ + DI+ VE+ R
Sbjct: 229 LAEREAAVDIEEKEADSALLLEFLLRVQQEKEEAAQKLCRDVQGLSTDIDEVEKRR---- 284
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNAR--GGSSAGSLQNKKGDGK 268
+ K+ +++ + R GG AG +G
Sbjct: 285 -------------------------GVLKHKGLMVSHAERDRIVGGDEAG-----PSEGN 314
Query: 269 AQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTK 328
+ R+ S S R R+ F+ L++ Y R ++ + P
Sbjct: 315 DIVSPVAESRRHSEVLS-------------RSARLMRNFSQLEQAYFSMRWKV-DPPGVD 360
Query: 329 QESD------KNIIHRE----GYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANI 378
+ D K I+ N L F L + RYSR V A LRHGD+ ++AN+
Sbjct: 361 MDVDGPSSGGKQIVEASPVAGSANDRLGGFFDSLCKYARYSRFEVKATLRHGDLLNTANM 420
Query: 379 VSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSK 438
V S+ FDRD++ FATAGV ++IKVF+ +V+NE D+H PVVEM +RSKLS + WN + K
Sbjct: 421 VCSLSFDRDEEFFATAGVCKKIKVFECDTVLNEHVDIHYPVVEMASRSKLSNICWNSYIK 480
Query: 439 NRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ +ASSDY+G++ +WD +T Q+++EY+EHEKRAWSVDFS +P+ L SGSDD V
Sbjct: 481 SHLASSDYDGVIQLWDASTSQTLVEYKEHEKRAWSVDFSHADPTKLASGSDDGTV 535
>gi|324507138|gb|ADY43033.1| E3 ubiquitin-protein ligase RFWD2 [Ascaris suum]
Length = 646
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 215/463 (46%), Gaps = 82/463 (17%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL---TNNQLYPNFLLDKLL 111
CPIC+Q+ +E + T CGHSFC CI HL S CP C L + ++PNF +
Sbjct: 53 CPICLQLFREPYSTICGHSFCRECISAHLERCSRCPICSRELDTASGPIVFPNFTAAAI- 111
Query: 112 KKTSARQISKTASPLENFRQALQQGCGVS----------------VKEIDSLMSLLSEKK 155
A I + + R A +GCG++ ID +M +L +++
Sbjct: 112 ----ADSIRSKTRMVRSIRSA-AEGCGIASEGTSDELVDLAMSLDASSIDRVMDVLRKRR 166
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDR 215
++ + R ++ +F+ + ++ D +++ Q +L ++K DR
Sbjct: 167 EQIALGDTRRKNVLMSEFIDEMITRREDTIRQAQHELSFLKH----------------DR 210
Query: 216 YSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHG 275
+V+ +L D+ + S + R AG L G A
Sbjct: 211 QTVQT-ILKDEK-----------------VVGSSSHRMVPDAGGLSTFVTCGSDIALRQP 252
Query: 276 HQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNI 335
D + S + R+ N L++ Y+ KR T ++ N+
Sbjct: 253 SFADDEIEMSK------------YRARLRQHMNGLEQAYVLKRICY----KTGNDARNNV 296
Query: 336 IHREGYNA---GLADFQSVLTTFTRYSRLRVIAELRHG--DIFHSANIVSSIEFDRDDQL 390
E A GL +F VL ++Y R +A L + D + +IVSSIEFD+D +
Sbjct: 297 --EEAIGACPDGLEEFSRVLQGMSQYGSFRRLASLNYNISDTSPALSIVSSIEFDKDGEY 354
Query: 391 FATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIV 450
F AGV+++IKV+ F +VV+ +H P+ ++ SK+S +SWN ++KN +ASSDY+G V
Sbjct: 355 FVVAGVTKKIKVYAFRNVVDNADALHYPLTQLQCNSKISNVSWNPYTKNMLASSDYDGTV 414
Query: 451 TVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+WD +S+ Y+EHEKR W+V F+ +P ++ SGSDD KV
Sbjct: 415 QLWDTYMSKSIRRYQEHEKRCWTVQFNNVDPQLMASGSDDAKV 457
>gi|308802161|ref|XP_003078394.1| COP1-like protein (ISS) [Ostreococcus tauri]
gi|116056846|emb|CAL53135.1| COP1-like protein (ISS) [Ostreococcus tauri]
Length = 635
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 220/453 (48%), Gaps = 72/453 (15%)
Query: 53 MLCPICMQIIKEAFLTA-CGHSFCYMCIITHL--------RNKSDCPCCGHYLTNNQLYP 103
+ CPIC+ +A A CGH+FC+ C L + CP CG TN QL P
Sbjct: 56 VTCPICLDPFSDAHCVATCGHTFCHACARATLDASASGGGERMAACPTCGSRFTNEQLVP 115
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEA 163
N ++ ++ + + ++ ++ + L+ LSEK R++ E
Sbjct: 116 NAAVNGMVAEMRRMLEEEEEKAAAG---SIVADGADDLERLTPLVKKLSEKHRELVLESR 172
Query: 164 ERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRML 223
+ ++L +FL R +K + ++ +L + DINAV R ++L
Sbjct: 173 AASREVLKEFLLESRARKEASAEALERELRCLSSDINAVRRE------------IQLLGG 220
Query: 224 GDDSNTRKSWLSS----IDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRK 279
GDDS + L S DK +IT ++ A G + G +
Sbjct: 221 GDDSEQLQDLLRSRGEVYDKE---VITRAMEALGLTRVGDI------------------- 258
Query: 280 DSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHRE 339
+++S +++RV QFN+LQ Y ++R + +D
Sbjct: 259 ---------VVDES-----KRRRVLRQFNELQSWYSRRRCLEKTDDEGAEPADDAC---P 301
Query: 340 GYNAGLADFQSVLTTFTRYSRLRVIAEL--RHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
+ + +F ++ TF R+S + + EL G ++ + +SSIEFD ++ FATAGVS
Sbjct: 302 SDSETIEEFSKLIDTFKRFSNITMATELVTTEGGGTNTGSPISSIEFDSTEENFATAGVS 361
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
+RI+ ++ V+ A P ++ T SKL+CLS+NK + IA+SDYEG+V++WDV
Sbjct: 362 KRIQFYNLERVL---AGSRQPAEQIMTHSKLTCLSYNKLIRQHIAASDYEGVVSIWDVEK 418
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+++++++EEHEKR WSVDF R+ PS+LVSGSDD
Sbjct: 419 KRAIIDFEEHEKRIWSVDFCRSNPSLLVSGSDD 451
>gi|47216612|emb|CAG10910.1| unnamed protein product [Tetraodon nigroviridis]
Length = 797
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 194/370 (52%), Gaps = 51/370 (13%)
Query: 125 PLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDE 184
P FR+ + G V+E D ++ ++E E+ +A + QIL++FL R+ K ++
Sbjct: 241 PGRRFRKRPETGHVDLVRE-DMEVAGVTEADESFEESQAAQR-QILMEFLKEARRNKKEQ 298
Query: 185 LKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGI 244
L+++Q +L+++++ D+ R + + M + + S SS I
Sbjct: 299 LEQLQKELNFLED----------DIKRVEEMSGLYSPMEAECTVPNVEAPSPAASCSSII 348
Query: 245 ITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVH 304
N G G+ Q K+ Q S L+ R+KR+
Sbjct: 349 DPPDYNQPPGF-GGTNQGKR-----------------------QTWYNSTLAS-RRKRLT 383
Query: 305 AQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVI 364
A F DL++CY + H +ES +N+ L DF L FTRY+ +R +
Sbjct: 384 AHFEDLEQCYFSNK-----MSHITEES-RNMNQ-------LDDFMECLAKFTRYNSVRPL 430
Query: 365 AELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMP 423
A L + D+++ ++IVSSIEFDRD FA AGV+++IKVF++ +V+ + D+H PV EM
Sbjct: 431 ATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMT 490
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+ +P +
Sbjct: 491 CNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQKSKVYQEHEKRCWSVDFNLMDPKL 550
Query: 484 LVSGSDDCKV 493
L SGSDD KV
Sbjct: 551 LASGSDDAKV 560
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFL 106
D +CPIC ++I+EA +T CGHSFC+ CI L + + CP C + + N +QLYPNFL
Sbjct: 27 DFVCPICFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFL 82
>gi|359485383|ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vinifera]
Length = 906
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 192/374 (51%), Gaps = 43/374 (11%)
Query: 150 LLSEKKRKMEQEEAERNM-------QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAV 202
L+E + +E+ EA + ++LL+FL ++++K+ ++ L + DI V
Sbjct: 353 FLNEPRDHLEEREALIKLTEDIEEQEVLLEFLLQVQQRKLVAADKLHGALSCLSSDIGEV 412
Query: 203 ERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQN 262
++ L + + L++ D+ LS DK + L +G +S G +
Sbjct: 413 MEQQMILNKKGGSF---LKLKRDE-------LSVFDK--VDYPSQCLAGKGSASLGLRKR 460
Query: 263 KKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR---- 318
+ + D + S++Q NQ + + + R+ F L+ Y R
Sbjct: 461 IRQGHDPHCVEDWSEHLDEVQKSETQSGNQEAI-LSKGSRLMKNFKKLESAYFSTRCKPS 519
Query: 319 ----RQMANQPH----------TKQESDKNIIHREGYNAG-----LADFQSVLTTFTRYS 359
+ + + P T+ S N++ + GYN G + F L + +S
Sbjct: 520 KPTEKMLTSSPISSTGWGSLVITEGSSVDNLVSKAGYNEGKGSRWINPFLEGLCKYLSFS 579
Query: 360 RLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPV 419
L+V A+L+ GD+ +S N+V S+ FDRD + FATAGV+++IK+F+ ++NE D+H PV
Sbjct: 580 NLKVRADLKQGDLLNSPNLVCSLSFDRDREFFATAGVNKKIKIFECDMILNENRDIHYPV 639
Query: 420 VEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRT 479
EM ++SKLSC+ WN + KN+I SSD+EG+V VWDV+ Q ME +EHEKR WSVDFS
Sbjct: 640 TEMASQSKLSCICWNGYIKNQIVSSDFEGVVQVWDVSRSQRFMEMKEHEKRVWSVDFSLA 699
Query: 480 EPSMLVSGSDDCKV 493
+P+ L SG DD V
Sbjct: 700 DPTKLASGGDDGAV 713
>gi|302782155|ref|XP_002972851.1| hypothetical protein SELMODRAFT_98534 [Selaginella moellendorffii]
gi|300159452|gb|EFJ26072.1| hypothetical protein SELMODRAFT_98534 [Selaginella moellendorffii]
Length = 731
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 131/207 (63%), Gaps = 15/207 (7%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQM--------ANQPHTKQESDKNIIHRE----GYNAGLA 346
R R+ F+ L++ Y R ++ + P + K I+ N L
Sbjct: 332 RSARLMRNFSQLEQAYFSMRWKVDPAGVDMDVDGPSS---GGKQIVEASPVAGSANDRLG 388
Query: 347 DFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFA 406
F L + RYSR V A LRHGD+ ++AN+V S+ FDRD++ FATAGV ++IKVF+
Sbjct: 389 GFFDSLCKYARYSRFEVKATLRHGDLLNTANMVCSLSFDRDEEFFATAGVCKKIKVFECD 448
Query: 407 SVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEE 466
+V+NE D+H PVVEM +RSKLS + WN + K+ +ASSDY+G++ +WD +T Q+++EY+E
Sbjct: 449 TVLNEHVDIHYPVVEMASRSKLSNICWNSYIKSHLASSDYDGVIQLWDASTSQTLVEYKE 508
Query: 467 HEKRAWSVDFSRTEPSMLVSGSDDCKV 493
HEKRAWSVDFS +P+ L SGSDD V
Sbjct: 509 HEKRAWSVDFSHADPTKLASGSDDGTV 535
>gi|313217594|emb|CBY38656.1| unnamed protein product [Oikopleura dioica]
gi|313242948|emb|CBY39678.1| unnamed protein product [Oikopleura dioica]
Length = 608
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 87/451 (19%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
G + + D+ C IC+ + KE +T CGH+FC C+ L CP C ++ N +PN
Sbjct: 54 GPTVFEPDLHCSICVSMFKEPHVTRCGHTFCRGCLSRSLAISPKCPKCDTPVSRNDHFPN 113
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
++ +++ R +K Q + + V I S++ L E++ +E +
Sbjct: 114 HAINDMIR---VRHRNKKHLEHMTIDQIVNLPGNIPVDSITSIIDALQERREVIEDRQ-- 168
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLG 224
C+ K LH+ + ++++ +D R R+ +++ +
Sbjct: 169 ----------QCIHKHM----------LHHFLIKMKKMKQNELDNLR-REFKTIEADLEI 207
Query: 225 DDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTG 284
+ N R S T S NA + R D L
Sbjct: 208 SERNVRSS-------------TDSENALVPDA--------------------DRPDDLNL 234
Query: 285 SDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAG 344
DS S R++R+ F DL Y++ R + +
Sbjct: 235 MDS--------SAGRRRRLDHHFADLTRSYIENRCAVTEK------------------FT 268
Query: 345 LADFQSVLTTFTRYSRLRVIAELRH-GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
L DF L+ FT Y +LR +A L++ + ++IVSSI+FD D FA AGV+++IK++
Sbjct: 269 LDDFSHELSRFTAYDKLRPLATLQYSNENIQQSSIVSSIDFDCDSDYFAVAGVTKKIKIY 328
Query: 404 DFASVV-NEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
D+ +V+ N + H P+ EM ++K+SC+ WNK+ KN++ASSDY+G++++WD + +
Sbjct: 329 DYHNVISNSVSTFHLPIHEMSCQNKISCVVWNKYHKNKLASSDYDGLISIWDTVSGKQTE 388
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+++EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 389 KFKEHEKRCWSVDFNTVDPKILASGSDDAKV 419
>gi|10438410|dbj|BAB15239.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 183/341 (53%), Gaps = 46/341 (13%)
Query: 171 LDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTR 230
++FL R+ K ++L++IQ +L ++EDI VE LY + +DS
Sbjct: 1 MEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----------VSEDSTVP 49
Query: 231 KSWLSSIDKNSSGIITSSLNARGGSSAGSLQ---NKKGDGKAQANSHGHQRKDSLTGSDS 287
+ + + S II S+ ++ +GS Q + G Q ++R LT S
Sbjct: 50 Q--FEAPSPSHSSIIDSTEYSQPPGFSGSSQAGVQWRYLGSLQPPPPRYKRFSCLTLPSS 107
Query: 288 -------------QCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDK 333
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 108 WDYRRLPPHLTKKQPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD- 165
Query: 334 NIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFA 392
+FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEFDRD FA
Sbjct: 166 -------------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFA 212
Query: 393 TAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTV 452
AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASSDYEG V +
Sbjct: 213 IAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVIL 272
Query: 453 WDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
WD T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 273 WDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 313
>gi|147836234|emb|CAN64346.1| hypothetical protein VITISV_017786 [Vitis vinifera]
Length = 1795
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 192/374 (51%), Gaps = 43/374 (11%)
Query: 150 LLSEKKRKMEQEEAERNM-------QILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAV 202
L+E + +E+ EA + ++LL+FL ++++K+ ++ L + DI V
Sbjct: 14 FLNEPRDHLEEREALIKLTEDIEEQEVLLEFLLQVQQRKLVAADKLHGALSCLSSDIGEV 73
Query: 203 ERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQN 262
++ L + + L++ D+ LS DK + L +G +S G +
Sbjct: 74 MEQQMILNKKGGSF---LKLKRDE-------LSVFDKVD--YPSQCLAGKGSASLGLRKR 121
Query: 263 KKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR---- 318
+ + D + S++Q NQ + + + R+ F L+ Y R
Sbjct: 122 IRQGHDPHCVEDWSEHLDEVQKSETQSGNQEAI-LSKGSRLMKNFKKLESAYFSTRCKPS 180
Query: 319 ----RQMANQPH----------TKQESDKNIIHREGYNAG-----LADFQSVLTTFTRYS 359
+ + + P T+ S N++ + GYN G + F L + +S
Sbjct: 181 KPTEKMLTSSPISSTGWGSLVITEGSSVDNLVSKAGYNEGKGSRWINPFLEGLCKYLSFS 240
Query: 360 RLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPV 419
L+V A+L+ GD+ +S N+V S+ FDRD + FATAGV+++IK+F+ ++NE D+H PV
Sbjct: 241 NLKVRADLKQGDLLNSPNLVCSLSFDRDREFFATAGVNKKIKIFECDMILNENRDIHYPV 300
Query: 420 VEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRT 479
EM ++SKLSC+ WN + KN+I SSD+EG+V VWDV+ Q ME +EHEKR WSVDFS
Sbjct: 301 TEMASQSKLSCICWNGYIKNQIVSSDFEGVVQVWDVSRSQRFMEMKEHEKRVWSVDFSLA 360
Query: 480 EPSMLVSGSDDCKV 493
+P+ L SG DD V
Sbjct: 361 DPTKLASGGDDGAV 374
>gi|119611407|gb|EAW91001.1| ring finger and WD repeat domain 2, isoform CRA_c [Homo sapiens]
Length = 460
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 179/349 (51%), Gaps = 73/349 (20%)
Query: 147 LMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHR 206
++ LL +KK+++E E +QIL++FL R+ K +E+ + + +
Sbjct: 1 MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREEMSGLYSPV-------------- 46
Query: 207 IDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGD 266
+DS + + + S II S+ ++ +GS Q KK
Sbjct: 47 -----------------SEDSTVPQ--FEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK-- 85
Query: 267 GKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQP 325
Q S L+ R+KR+ A F DL++CY R ++++
Sbjct: 86 ---------------------QPWYNSTLAS-RRKRLTAHFEDLEQCYFSTRMSRISDDS 123
Query: 326 HTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSSIEF 384
T + D +FQ L+ FTRY+ +R +A L + D+++ ++IVSSIEF
Sbjct: 124 RTASQLD--------------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEF 169
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
DRD FA AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ + KN +ASS
Sbjct: 170 DRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASS 229
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
DYEG V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD KV
Sbjct: 230 DYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 278
>gi|224075074|ref|XP_002304547.1| predicted protein [Populus trichocarpa]
gi|222841979|gb|EEE79526.1| predicted protein [Populus trichocarpa]
Length = 1020
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 103/147 (70%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F L + RYS+ V LR GD +SAN++ S+ FDRD FA GVS++IK+FD
Sbjct: 684 LGSFFDGLCKYARYSKFEVRGLLRTGDFSNSANVICSLSFDRDADYFAAGGVSKKIKIFD 743
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F S+ N+P D+H PV+EM SKLSC+ WN + KN +AS+ Y+G+V +WDV+T Q V +Y
Sbjct: 744 FNSIFNDPVDIHYPVIEMSNESKLSCICWNSYIKNYLASTGYDGVVKLWDVSTGQGVFQY 803
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDC 491
EHEKRAWSVDFS+ P+ L SGSDDC
Sbjct: 804 NEHEKRAWSVDFSQVCPTKLASGSDDC 830
>gi|255583820|ref|XP_002532662.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223527622|gb|EEF29735.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 1011
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 18/218 (8%)
Query: 293 SGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNII-HREGYNA-------- 343
S +S + R+ N + Y R Q+ P + SDK+ + +RE ++A
Sbjct: 599 SSVSNTDEVRLMRNINQIGNAYFSMRSQVCLTP-AQSRSDKDFLKNRERWSAVHNDNEEL 657
Query: 344 --------GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAG 395
L F F RYS+ V L++ D+ S N++ S+ FDRD++ A AG
Sbjct: 658 NMTQKSEDPLGAFFEGFCKFARYSKFEVCGSLKNRDLLSSTNVLCSLSFDRDEEYIAAAG 717
Query: 396 VSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
+S++IKVF+FA+++N+ D+H PVVEM +SKLSCLSWN + KN +AS+DY+G++ +WD
Sbjct: 718 ISKKIKVFEFATLLNDSIDIHYPVVEMSNKSKLSCLSWNNYIKNYLASTDYDGVIQMWDA 777
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q + +Y EH+KRAWSVDFS +P+M SGSDDC V
Sbjct: 778 GTGQGLSQYTEHQKRAWSVDFSLADPTMFASGSDDCSV 815
>gi|242054261|ref|XP_002456276.1| hypothetical protein SORBIDRAFT_03g033340 [Sorghum bicolor]
gi|241928251|gb|EES01396.1| hypothetical protein SORBIDRAFT_03g033340 [Sorghum bicolor]
Length = 783
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 139/236 (58%), Gaps = 26/236 (11%)
Query: 281 SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR-- 338
S T S+ + +S LS + R+ F L+ Y R ++A Q Q S+ I+ R
Sbjct: 358 SRTVPSSELIQESVLS--KSSRLMKNFKKLETAYFLTRSKLAKQA-GNQISNHQIVKRAT 414
Query: 339 ------EGYN---------------AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSAN 377
EG + + F L + +S+L+V AEL+H D+ +S+N
Sbjct: 415 GSAIGTEGSSIDDFSLERQYGRRQRGWVNSFLEGLCKYLSFSKLKVRAELKHCDLLNSSN 474
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFS 437
+V S+ FDRD + FATAGV+++IKVFD+ +VNE D+H PVVEM RSKLSC+ WN +
Sbjct: 475 LVCSVGFDRDREFFATAGVNKKIKVFDYNMIVNEHRDIHYPVVEMSNRSKLSCICWNSYM 534
Query: 438 KNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
K+ IASSD+EGIV VWDVT Q +E EHE+R WSVDFS +P+ LVSGSDD V
Sbjct: 535 KSHIASSDFEGIVQVWDVTRSQVFVEMREHERRVWSVDFSIVDPTKLVSGSDDGSV 590
>gi|242091417|ref|XP_002441541.1| hypothetical protein SORBIDRAFT_09g029030 [Sorghum bicolor]
gi|241946826|gb|EES19971.1| hypothetical protein SORBIDRAFT_09g029030 [Sorghum bicolor]
Length = 1128
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 189/361 (52%), Gaps = 64/361 (17%)
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
+SLL + + +++ E ++ L +FL L+++K ++ +L ++ DI VER
Sbjct: 621 LSLLDQAPVSISEDDTESSL--LFNFLSQLKEEKEMLAAKLSAELGSLETDITEVER--- 675
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
R+S ++R+ +D++ S SG+++ G+S ++Q G
Sbjct: 676 -------RHSARMRLSLEDTDVLPS---------SGVLS-------GASVSAVQGALLSG 712
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQM--ANQP 325
L S S V ++RV L+ Y R + +
Sbjct: 713 ---------------------LLPTSCKSSVYEERVMRNLVQLENAYYSMRSSVDTSETN 751
Query: 326 HTKQESDKNIIHREGYNAGLADFQS-------------VLTTFTRYSRLRVIAELRHGDI 372
K+ ++ + RE ++ +DF + L + R+SR V L++ DI
Sbjct: 752 AIKRPDNEALRVRENFHQLHSDFDAKGEKTDRLGCFFDGLCKYARHSRFEVRGILKNADI 811
Query: 373 FHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLS 432
+S N++ S+ FDRD++ FA AGVS++IK+F+F +++N+ D+H P+VEMP++SKLSC+S
Sbjct: 812 LNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLVEMPSKSKLSCVS 871
Query: 433 WNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
WN + KN +AS+DY+G V +WD ++ Q ++ EH KRAWSV FS +P+ML SGSDDC
Sbjct: 872 WNNYIKNYLASTDYDGTVQLWDASSGQGFTQFTEHRKRAWSVSFSEVDPTMLASGSDDCC 931
Query: 493 V 493
V
Sbjct: 932 V 932
>gi|356546870|ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 892
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 115/156 (73%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
REG +A + F L + +S+L+V A+L+ GD+ HS+N+V S+ FDRD + FATAGV+
Sbjct: 544 REGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVN 603
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKVF+ S++NE D+H PVVEM +RSKLS + WN + K++IASS++EG+V +WDVT
Sbjct: 604 KKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTR 663
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q + E EHE+R WS+DFS +P+ML SGSDD V
Sbjct: 664 SQVISEMREHERRVWSIDFSSADPTMLASGSDDGSV 699
>gi|356542282|ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 892
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 115/156 (73%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
REG +A + F L + +S+L+V A+L+ GD+ HS+N+V S+ FDRD + FATAGV+
Sbjct: 543 REGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVN 602
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKVF+ S++NE D+H PVVEM +RSKLS + WN + K++IASS++EG+V +WDVT
Sbjct: 603 KKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTR 662
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q + E EHE+R WS+DFS +P+ML SGSDD V
Sbjct: 663 SQVISEMREHERRVWSIDFSSADPTMLASGSDDGSV 698
>gi|255537717|ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223549824|gb|EEF51312.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 1044
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 105/149 (70%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F L + RYS+ V LR GD +SAN++ S+ FDRD FATAGVS++IK+F+
Sbjct: 700 LGSFFDGLCKYARYSKFEVRGLLRTGDFNNSANVICSLSFDRDMDYFATAGVSKKIKIFE 759
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F S++N+ D+H PV+EM +SKLSC+ WN + KN +AS+DY+G+V +WD T Q V +Y
Sbjct: 760 FNSLLNDSVDIHYPVIEMSNKSKLSCICWNTYIKNYLASTDYDGVVKLWDANTGQGVYQY 819
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHE+RAWSVDFS+ P+ L SG DDC V
Sbjct: 820 NEHERRAWSVDFSQVYPTKLASGGDDCTV 848
>gi|359473903|ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, partial [Vitis vinifera]
Length = 1054
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 16/209 (7%)
Query: 300 KKRVHAQFNDLQECYLQKRRQMANQPHTK--QESDKNII-HREGYNAG------------ 344
+KR+ + L+ Y R ++ P T SDK+++ +RE +
Sbjct: 651 EKRLMRNISQLESAYFSMRSKI-QLPETDALTRSDKDLLLNRENFYQAQKNGEDLKVTDR 709
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F + L + RYS+ V LR+GD +SAN++ S+ FDRD+ A AGVS++IK+F+
Sbjct: 710 LGTFFNGLCKYARYSKFEVRGILRNGDFINSANVICSLSFDRDEDYLAAAGVSKKIKIFE 769
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F ++ N+ D+H PV+EM +SKLSC+ WN + KN +AS+DY+G+V +WD +T Q + +Y
Sbjct: 770 FHALFNDSVDIHYPVIEMTNKSKLSCICWNNYIKNYLASTDYDGVVKLWDASTGQGLSQY 829
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+H+KRAWSVDFSR +P L SGSDDC V
Sbjct: 830 IDHQKRAWSVDFSRVDPKKLASGSDDCSV 858
>gi|297742304|emb|CBI34453.3| unnamed protein product [Vitis vinifera]
Length = 799
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 300 KKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYS 359
+KR+ + L+ Y R ++ D + R L F + L + RYS
Sbjct: 416 EKRLMRNISQLESAYFSMRSKIQLPETDALTQDLKVTDR------LGTFFNGLCKYARYS 469
Query: 360 RLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPV 419
+ V LR+GD +SAN++ S+ FDRD+ A AGVS++IK+F+F ++ N+ D+H PV
Sbjct: 470 KFEVRGILRNGDFINSANVICSLSFDRDEDYLAAAGVSKKIKIFEFHALFNDSVDIHYPV 529
Query: 420 VEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRT 479
+EM +SKLSC+ WN + KN +AS+DY+G+V +WD +T Q + +Y +H+KRAWSVDFSR
Sbjct: 530 IEMTNKSKLSCICWNNYIKNYLASTDYDGVVKLWDASTGQGLSQYIDHQKRAWSVDFSRV 589
Query: 480 EPSMLVSGSDDCKV 493
+P L SGSDDC V
Sbjct: 590 DPKKLASGSDDCSV 603
>gi|440790793|gb|ELR12061.1| COP1, putative [Acanthamoeba castellanii str. Neff]
Length = 596
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 213/454 (46%), Gaps = 92/454 (20%)
Query: 89 CPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLM 148
CP C L +QL+PN+ L+ +L+K I T PL L +++ +++ L+
Sbjct: 2 CPTCKTPLRRDQLFPNYALNAVLEKVKTNSIGVTLPPLAQLENVLTSQS-LALADVNKLL 60
Query: 149 SLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRID 208
LL +KR ME E +++LLDFL+ ++Q D+ ++E I +ER ++
Sbjct: 61 GLLLAQKRSMESETKHEELELLLDFLYRTKQQHKSSNLNGSYDM--LEEHIKQLERQKV- 117
Query: 209 LYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGK 268
+++S D ++ G S + R S S+ K+G G
Sbjct: 118 -----------------------LFVASQDPDAYGFTPSCIGGRERSP--SVGEKRGYGT 152
Query: 269 AQAN----SHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQ----KRRQ 320
A + H+ +D L V +K+R+ ++LQ+ Y + K++Q
Sbjct: 153 MAAPCDSMNRPHEERDQL--------------VNKKRRIVEHMDELQQTYFRMLKAKKQQ 198
Query: 321 MANQPHTKQESD------KNIIHREGYNAGLAD-----------------------FQSV 351
+ T E D +++ R G A A+ F
Sbjct: 199 RLARAVTSGEHDAKGKERRDVTGRPGTEAVAAEYKNDAATTTPTTGGGGAVVDLDTFGKQ 258
Query: 352 LTTFTRYSRLRVIAELR------------HGDIFHSANIVSSIEFDRDDQLFATAGVSRR 399
L R++ +IA ++ G A++V+SIEFD++ Q FA AG ++R
Sbjct: 259 LQKLVRFNGYEIIAAIQDPSRGSAREGSGRGQGRAHASLVTSIEFDKEGQHFAVAGYNKR 318
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
I+VFD+ SVV H PV E+ T S+LSC+SWN + ++++A S+Y G V+VWD+ T Q
Sbjct: 319 IRVFDYRSVVEGAGTTHFPVHELTTLSRLSCVSWNGYIRSQLAGSEYSGRVSVWDLNTSQ 378
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
V ++ EHEKRAWSV F+ T P+ +VS SDD KV
Sbjct: 379 LVCKWHEHEKRAWSVHFAPTHPTRIVSASDDTKV 412
>gi|224114936|ref|XP_002316897.1| predicted protein [Populus trichocarpa]
gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 175/337 (51%), Gaps = 42/337 (12%)
Query: 180 QKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDK 239
+K D ++Q + + DI V +H++ L + D + K R GD + L+ +D
Sbjct: 343 RKQDAADKLQDTISLLCSDIEEVTKHQVFLKKKGD--TCKERGEGDHLTSNIPALNVVDI 400
Query: 240 NSSGIITSSLNARGGSSAG-SLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVV 298
+ S SSL +R G + N + K N Q D+ S L
Sbjct: 401 DDS----SSLGSRKRFCPGLEIHNVE---KCDDNLDESQNSDTFVESQESPL-------F 446
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPH--------------------TKQESDKNIIHR 338
R R+ F L+ Y R + P T++ S +I +
Sbjct: 447 RSSRLMKNFKKLESAYFLTRCRPVRPPGKPSFARNLPVISDGRISIVATERSSINSIAPK 506
Query: 339 EGYNAG-----LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFAT 393
+ + G ++ F L + +S+L+V A+L+ GD+ +S+N+V SI FDRD + FAT
Sbjct: 507 QQFTEGRRSGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSISFDRDGEFFAT 566
Query: 394 AGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVW 453
AGV+++IKVF+ +++NE D+H PVVEM RSKLS + WN + K+++ASS++EG+V VW
Sbjct: 567 AGVNKKIKVFECDTIINEARDIHYPVVEMVCRSKLSSICWNSYIKSQLASSNFEGVVQVW 626
Query: 454 DVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
DVT Q V E EHE+R WSVDFS +P+ML SGSDD
Sbjct: 627 DVTRSQVVTEMREHERRVWSVDFSSADPTMLASGSDD 663
>gi|297597537|ref|NP_001044115.2| Os01g0725800 [Oryza sativa Japonica Group]
gi|57899731|dbj|BAD87451.1| Cop1 protein-like [Oryza sativa Japonica Group]
gi|215678883|dbj|BAG95320.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673643|dbj|BAF06029.2| Os01g0725800 [Oryza sativa Japonica Group]
Length = 628
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 136/236 (57%), Gaps = 25/236 (10%)
Query: 281 SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR-- 338
S T S + +S LS + R+ F L+ Y R ++A Q S ++ R
Sbjct: 376 SGTVPSSVLIQESVLS--KSSRLMKNFKKLETAYFLTRSKLAKQVGNPVSSCHQVVKRTT 433
Query: 339 ----------------EGY-----NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSAN 377
EG+ + F L ++ +S+L+V AEL+ D+ +S+N
Sbjct: 434 GSPVVTEGSSIDDFALEGHYGTRQRGWMNSFLEGLCSYLSFSKLKVKAELKQCDLLNSSN 493
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFS 437
+V S+ FDRD + FATAGV+++IKVF++ +VNE D+H PVVEM RSKLSC+ WN +
Sbjct: 494 LVCSVGFDRDKEFFATAGVNKKIKVFEYNMIVNEHCDIHYPVVEMSNRSKLSCICWNSYM 553
Query: 438 KNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
K+ IASSD+EGIV VWDVT Q +E EHE+R WSVDFS +P+ LVSGSDD V
Sbjct: 554 KSHIASSDFEGIVQVWDVTRSQVFVEMREHERRVWSVDFSLADPTKLVSGSDDGSV 609
>gi|395530861|ref|XP_003767505.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Sarcophilus
harrisii]
Length = 460
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 128/197 (64%), Gaps = 16/197 (8%)
Query: 299 RKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R +++++ T + D +FQ L+ FTR
Sbjct: 85 RRKRLTAHFEDLEQCYFSTRMSRVSDESRTASQLD--------------EFQECLSKFTR 130
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 131 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 190
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 191 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 250
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 251 NLMDPKLLASGSDDAKV 267
>gi|414880672|tpg|DAA57803.1| TPA: hypothetical protein ZEAMMB73_989456 [Zea mays]
Length = 438
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 108/146 (73%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L + +S+L+V AEL+H D +S+N+V S+ FDRD + FATAGV+++IKVF++
Sbjct: 100 FLEGLCKYLSFSKLKVRAELKHCDSLNSSNLVCSVGFDRDREFFATAGVNKKIKVFEYNM 159
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
+VNE D+H PVVEM RSKLSC+SWN + K+ IASSD+EGIV VWDVT Q +E EH
Sbjct: 160 IVNEHRDIHYPVVEMSNRSKLSCISWNSYMKSHIASSDFEGIVQVWDVTRSQVFVEMREH 219
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
E+R WSVDFS +P+ LVSGSDD V
Sbjct: 220 ERRVWSVDFSIVDPTKLVSGSDDGSV 245
>gi|68341963|ref|NP_001020297.1| ring finger and WD repeat domain 2 [Rattus norvegicus]
gi|60551479|gb|AAH91284.1| Ring finger and WD repeat domain 2 [Rattus norvegicus]
Length = 433
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 16/197 (8%)
Query: 299 RKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 58 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 103
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 104 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 163
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 164 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 223
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 224 NLMDPKLLASGSDDAKV 240
>gi|449446929|ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus]
gi|449498653|ref|XP_004160596.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus]
Length = 850
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 181/349 (51%), Gaps = 60/349 (17%)
Query: 178 RKQKVDELKEIQTDLHYIKEDINAVERHRIDLYR--------ARDRY-SVKLRMLGDDSN 228
RKQ+ ++Q + ++ DI V RH+ + + +D + + L + N
Sbjct: 337 RKQEAAH--KLQDTISFLCSDIEQVMRHQTNFKKNIGSHTDLVKDNHLPLNLPSMPPVRN 394
Query: 229 TRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQ 288
T + L S + GI+T + A G D + + S+
Sbjct: 395 TDSAALGSRKRFRPGILTHDIEACG-----------------------DNLDHCSKTSSE 431
Query: 289 CLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPH-------------------TKQ 329
N+ G+ + + R+ F L+ Y R ++ N+P T++
Sbjct: 432 NDNEQGV-LFKSSRLMKNFKKLELAYFLMRGRV-NKPSRQFVKHSSVSSDGRGSVVLTER 489
Query: 330 ESDKNIIHREGYN-----AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEF 384
S N+ +E N ++ F L + +S+L+V A+L+ GD+ +S+N+V S+ F
Sbjct: 490 SSVNNLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSLSF 549
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
DRD + FATAGV+R+IKVF + S+VNE D+H PVVEM +RSKLS + WN++ K++IASS
Sbjct: 550 DRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIASS 609
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
++EG+V VWDVT Q V E EHE+R WS+DFS +P++L SGSDD V
Sbjct: 610 NFEGVVQVWDVTRSQVVTEMGEHERRVWSIDFSSADPTILASGSDDGSV 658
>gi|349604922|gb|AEQ00335.1| E3 ubiquitin-protein ligase RFWD2-like protein, partial [Equus
caballus]
Length = 320
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 16/197 (8%)
Query: 299 RKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 60 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 105
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 106 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 165
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 166 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 225
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 226 NLMDPKLLASGSDDAKV 242
>gi|431915989|gb|ELK16243.1| E3 ubiquitin-protein ligase RFWD2, partial [Pteropus alecto]
Length = 555
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 16/197 (8%)
Query: 299 RKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 212 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 257
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 258 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 317
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF
Sbjct: 318 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF 377
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 378 NLMDPKLLASGSDDAKV 394
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 28/205 (13%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 38 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 97
Query: 111 LKKTSARQISKTASPLENFR----QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQE 161
+ K R + L++ Q Q G + + ++ ++ LL +KK+++E E
Sbjct: 98 ILKQKQR-FEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 156
Query: 162 EAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRA-----RDR- 215
+QIL++FL R+ K ++L++IQ +L ++EDI VE + Y + R R
Sbjct: 157 SHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVETKKQPWYNSTLASRRKRL 216
Query: 216 -----------YSVKLRMLGDDSNT 229
+S ++ + DDS T
Sbjct: 217 TAHFEDLEQCYFSTRMSRISDDSRT 241
>gi|413951136|gb|AFW83785.1| hypothetical protein ZEAMMB73_750611 [Zea mays]
Length = 812
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 137/236 (58%), Gaps = 25/236 (10%)
Query: 281 SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQES-DKNIIHRE 339
S T S+ + +S LS + R+ F L+ Y R ++ Q ++ S D+ + +
Sbjct: 364 SRTVPSSELIQESVLS--KSSRLMKNFKKLETAYFLTRSKLMKQVGSQISSCDRVVKNTT 421
Query: 340 GYNAG----------------------LADFQSVLTTFTRYSRLRVIAELRHGDIFHSAN 377
G G + F L + +S+L+V AEL+H D+ +S+N
Sbjct: 422 GSAVGTEGSSLDDFSLERQYGTRQRGWVNSFLEGLCKYLSFSKLKVRAELKHCDLLNSSN 481
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFS 437
+V S+ FDRD + FATAGV+++IKVF++ +VNE D+H PVVEM RSKLSC+ WN +
Sbjct: 482 LVCSVGFDRDREFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSKLSCICWNSYM 541
Query: 438 KNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
K+ IASSD+EGIV VWDVT Q + EHE+R WSVDFS +P+ LVSGSDD V
Sbjct: 542 KSHIASSDFEGIVQVWDVTRSQVFVGMREHERRVWSVDFSIVDPTKLVSGSDDGSV 597
>gi|359493656|ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
Length = 903
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 192/380 (50%), Gaps = 58/380 (15%)
Query: 150 LLSEKKRKMEQEEAERNMQILLDFLHCL---------RKQKVDELKEIQTDLHYIKEDIN 200
L+E + KME+ EA ++ ++ L RKQ + ++Q + ++ DI
Sbjct: 355 FLTEPRDKMEEREAAIELRERIEEQELLLEFLLLMQQRKQGA--VDKLQDTISFLSSDIE 412
Query: 201 AVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNS-SGIITSSLNARGGSSAGS 259
V + + L + Y ++ DD +T +D+N S + SS R
Sbjct: 413 EVGKQQATLRKRGGSYQ---ELVKDDQSTSDLSPMDVDENEDSTSVRSSKRFR------- 462
Query: 260 LQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKK--RVHAQFNDLQECYLQK 317
Q H + D+L +N ++ K R+ F L+ YL
Sbjct: 463 ----------QGVHHIKELDDTLNNGQKLGMNAENPEILISKSSRLMKNFKKLESAYLLT 512
Query: 318 RRQM---ANQPH----------------TKQESDKNIIHREGYN-----AGLADFQSVLT 353
RR+ + +P T++ S N+ ++ YN + F L
Sbjct: 513 RRKPTKPSGKPSNKISPPSSNGRGSIVVTERSSVNNLASKDQYNEHGQSGWINPFLDGLC 572
Query: 354 TFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPA 413
+ +S+L+V A+L+ GD+ +S+N+V S+ FDRD +LFATAGV+++IKVF+ S++NE
Sbjct: 573 KYLSFSKLKVKADLKQGDLLNSSNLVCSVSFDRDGELFATAGVNKKIKVFECNSILNEDR 632
Query: 414 DVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWS 473
D+H P+VEM RSKLS + WN + K++IASS++EG+V VWDVT Q + E EHE+R WS
Sbjct: 633 DIHYPLVEMACRSKLSSICWNSYIKSQIASSNFEGVVQVWDVTRSQVLTEMREHERRVWS 692
Query: 474 VDFSRTEPSMLVSGSDDCKV 493
+D+S +P+ML SGSDD V
Sbjct: 693 IDYSLADPTMLASGSDDGSV 712
>gi|224053801|ref|XP_002297986.1| predicted protein [Populus trichocarpa]
gi|222845244|gb|EEE82791.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 14/206 (6%)
Query: 302 RVHAQFNDLQECYLQKRR--QMANQPHTKQESDKNIIHREGYNAG------------LAD 347
R+ + + L+ Y R Q+A ++ +I+R+ ++ L
Sbjct: 320 RLMSNISQLESAYFSMRSKVQLAETDAATRQDKDLLINRKNWDLAQEDEETQNTTDCLGS 379
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L + RYS+ LR GD +SAN++ S+ FDRD FA AGVS++IK+F+F S
Sbjct: 380 FFDGLCKYARYSKFEARGLLRTGDFNNSANVICSLSFDRDADYFAAAGVSKKIKIFEFDS 439
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
+ N+ D+H PV+EM SKLSC+ WN + K+ +AS+ Y+G+V +WDV T Q V +Y+EH
Sbjct: 440 LFNDSVDIHYPVIEMSNESKLSCICWNSYIKSYLASTGYDGVVKLWDVNTGQVVFQYKEH 499
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
EKRAWSVDFS+ P+ L SGSDDC V
Sbjct: 500 EKRAWSVDFSQVYPTKLASGSDDCSV 525
>gi|357136242|ref|XP_003569714.1| PREDICTED: protein SPA1-RELATED 3-like [Brachypodium distachyon]
Length = 781
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 136/236 (57%), Gaps = 25/236 (10%)
Query: 281 SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR-- 338
S T S + +S LS + R+ F L+ Y R + A+Q S +I R
Sbjct: 355 SRTVPSSVLIQESVLS--KSSRLLKNFKKLEAAYFLTRSKFASQVCNPISSCDQVIKRTT 412
Query: 339 ----------------EGY-----NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSAN 377
EG+ + F L + +S+L+V AEL+ D+ +S+N
Sbjct: 413 GSAVGTEGSSIDDFALEGHYRRRQRGWMNSFLEGLCRYLSFSKLKVRAELKQCDLLNSSN 472
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFS 437
+V S+ FDRD++ FATAGV+++IKVF++ +VNE D+H PVVEM RSKLSC+ WN +
Sbjct: 473 LVCSVGFDRDNEFFATAGVNKKIKVFEYNMLVNEHRDIHYPVVEMSNRSKLSCICWNSYM 532
Query: 438 KNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
K+ IASSD+EG+V VWDVT Q +E EHE+R WSVDFS +P+ LVSGSDD V
Sbjct: 533 KSHIASSDFEGLVQVWDVTRSQVFVEMREHERRVWSVDFSLADPTKLVSGSDDGSV 588
>gi|357128456|ref|XP_003565889.1| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Brachypodium
distachyon]
Length = 1143
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 181/368 (49%), Gaps = 77/368 (20%)
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
+SLL K EE + +LL+FL L+++K + ++ DL ++ DI VER
Sbjct: 635 LSLLDNKVPAAVNEE-DTESGLLLNFLSQLKEEKEMQASKLSADLAGLQTDIAEVERR-- 691
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
+ R+ +S++ G++ SS N G+S+ +L
Sbjct: 692 --HSLRNGFSLE---------------------DMGVLASS-NDLPGTSSDAL------- 720
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHT 327
R SL+G L S + ++RV L+ Y R T
Sbjct: 721 ----------RGGSLSG----LLPPICRSSIYEQRVMRNLEQLENAYYSMR-------ST 759
Query: 328 KQESDKNIIHREGYNA----------------------GLADFQSVLTTFTRYSRLRVIA 365
S+ N+I R +A L F L + R+SR V
Sbjct: 760 IDTSETNVIKRSDNDALRVRDNFYQLHGDTDAMNEQTDRLGCFFDGLCKYARHSRFEVRG 819
Query: 366 ELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTR 425
L++ DI +S N++ S+ FDRD++ FA AGVS++IK+F+F +++N+ D+H P++EMP++
Sbjct: 820 ILKNADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSK 879
Query: 426 SKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLV 485
SKLSC+ WN + KN +AS+DY+G V +WD +T Q ++ EH KRAWSV FS +P+ L
Sbjct: 880 SKLSCVCWNSYIKNYLASTDYDGTVQLWDASTGQGFTQFTEHRKRAWSVSFSEVDPTKLA 939
Query: 486 SGSDDCKV 493
SGSDDC V
Sbjct: 940 SGSDDCCV 947
>gi|413946609|gb|AFW79258.1| hypothetical protein ZEAMMB73_545110 [Zea mays]
Length = 1120
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 184/361 (50%), Gaps = 64/361 (17%)
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
+SLL E + +++ E ++ LL+FL L+++K + ++ +L ++ DI V++
Sbjct: 613 LSLLDEAPVSIGEDDTESSL--LLNFLSQLKEEKAMQSAKLSAELGSLQTDITEVDK--- 667
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
R+S ++R+ DD++ + S +A G+S +LQ G
Sbjct: 668 -------RHSARMRLSLDDTD----------------VLPSSSALSGASVSALQGALLSG 704
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQM--ANQP 325
L S S + ++RV L+ Y R +
Sbjct: 705 ---------------------LLPASYKSSIYEERVMRNLVQLENAYYSMRSSLDTCETN 743
Query: 326 HTKQESDKNIIHREGYNAGLAD-------------FQSVLTTFTRYSRLRVIAELRHGDI 372
K+ ++ + RE ++ +D F L + R++R V L++ DI
Sbjct: 744 VIKRPDNEALRARENFHQLHSDSDAKDEKTDRLGCFFDGLCKYARHNRFEVRGILKNADI 803
Query: 373 FHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLS 432
+S N++ S+ FDRD++ FA AGVS++IK+F+F +++N+ D+H P++EMP++SKLSC+
Sbjct: 804 LNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSKLSCVC 863
Query: 433 WNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
WN + KN +AS+DY+G V +WD ++ Q ++ EH KR WSV FS +P+ L SGSDDC
Sbjct: 864 WNNYIKNYLASTDYDGTVQLWDASSGQGFTQFTEHRKRTWSVSFSDVDPTKLASGSDDCC 923
Query: 493 V 493
V
Sbjct: 924 V 924
>gi|260828987|ref|XP_002609444.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
gi|229294800|gb|EEN65454.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
Length = 584
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
R+ R+ F+DL++CY R + Q T L +F LT FT+Y
Sbjct: 221 RRTRLDQHFDDLEKCYFSIRLKEFGQTETHSTD------------SLCEFTDSLTKFTKY 268
Query: 359 SRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHC 417
S R +A L + DI++ ++IVSSIEFDRD++ FA AGV+++IKVF++ +V+ + D+H
Sbjct: 269 SGFRPLATLSYASDIYNGSSIVSSIEFDRDNEYFAIAGVTKKIKVFEYGTVIRDAVDIHY 328
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
P EM SK+SC+ W+ + K +ASSDYEG VT+WD ++EHEKR WSVDF+
Sbjct: 329 PCSEMACNSKISCVCWSSYHKGMLASSDYEGTVTLWDAFNATKSRMFQEHEKRCWSVDFN 388
Query: 478 RTEPSMLVSGSDDCKV 493
+P +L SGSDD KV
Sbjct: 389 HVDPKLLASGSDDAKV 404
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL-TNNQLYPNFLLD 108
+ D +CPIC +I+EA +T CGHSFC+ CI L + CP C + +Q++PNFLL+
Sbjct: 30 NNDFVCPICFDMIEEAHMTKCGHSFCFKCIQQSLEESNRCPKCNFVIEKTDQIFPNFLLN 89
Query: 109 KLL----KKTSARQISKTASP----LENFRQAL-QQGCGVSVKEIDSLMSLLSEKKRKME 159
+L+ ++ R+ K P L F++ L + + + +++ ++ +L +KK ++E
Sbjct: 90 ELILKHRQRLEERKRVKLDQPNGMKLTEFQELLSHEDDNLDITDVNLMLEVLYQKKTRLE 149
Query: 160 QEEAERNMQILLDFLHCLRKQK 181
+ QIL +FL R++K
Sbjct: 150 ADSIAAQNQILKEFLQHARRRK 171
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRY 358
R+ R+ F+DL++CY R + Q T L +F LT FT+Y
Sbjct: 493 RRTRLDQHFDDLEKCYFSIRLKEFGQTETHSTD------------SLCEFTDSLTKFTKY 540
Query: 359 SRLRVIAELRHG-DIFHSANIVS 380
S R +A L + DI++ ++IVS
Sbjct: 541 SGFRPLATLSYASDIYNGSSIVS 563
>gi|357481459|ref|XP_003611015.1| Histone acetyltransferase type B subunit [Medicago truncatula]
gi|355512350|gb|AES93973.1| Histone acetyltransferase type B subunit [Medicago truncatula]
Length = 1323
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 126/215 (58%), Gaps = 14/215 (6%)
Query: 293 SGLSVVRKKRVHAQFNDLQECYLQKRRQM-ANQPHTKQESDKNIIH-REGYNA------- 343
S +S + R+ L+ Y R ++ ++ DK+I+ RE ++
Sbjct: 624 SPISNTNELRLMKNIGHLESAYFSMRSKVQISETDATDHPDKDILRTRENWSVTQKGEEQ 683
Query: 344 -----GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSR 398
L F L + RYS+L V LR+ D + AN++ S+ FDRD+ FA+AG+S+
Sbjct: 684 HNSKDALGTFFDGLCKYARYSKLEVRGILRNADFNNPANVICSLSFDRDEDYFASAGISK 743
Query: 399 RIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQ 458
+IK+FDF ++ N+ D+H P VEM RSKLSC+ WN + KN +AS+DY+G+V +WD +T
Sbjct: 744 KIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNSYIKNYLASTDYDGVVKLWDASTG 803
Query: 459 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q +Y EHEKRAWSVDFS P+ SGSDDC V
Sbjct: 804 QEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTV 838
>gi|449452259|ref|XP_004143877.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus]
gi|449501807|ref|XP_004161464.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus]
Length = 1036
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 104/149 (69%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F ++RYS+ V LR+GD S+N++ S+ FDRD++ FA AGVS++I++F+
Sbjct: 692 LGAFFDGFCKYSRYSKFEVRGVLRNGDFNSSSNVICSLSFDRDEEYFAAAGVSKKIRIFE 751
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F SV ++ D+H P VEM RSKLSC+ WN + KN +AS+DY+G+V +WD T Q V ++
Sbjct: 752 FNSVFSDSVDIHYPAVEMFNRSKLSCICWNGYIKNYLASTDYDGVVKLWDATVGQEVSQF 811
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EH KRAWSVDFS+ P+ L SGSDDC V
Sbjct: 812 NEHNKRAWSVDFSQVHPTKLASGSDDCSV 840
>gi|224128308|ref|XP_002329131.1| predicted protein [Populus trichocarpa]
gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa]
Length = 857
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
Query: 339 EGYNAG-LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
+G +G ++ F L + YS+L+V A+L+ GD+ +S+N+V S+ FDRD + FATAGV+
Sbjct: 509 KGRQSGWISPFLEGLCKYLSYSKLKVKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVN 568
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKVF+ +++NE D+H PVVEM +RSKLS + WN++ ++IASS++EG+V VWDVT
Sbjct: 569 KKIKVFECDTIINEARDIHYPVVEMVSRSKLSSICWNRYITSQIASSNFEGVVQVWDVTR 628
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q V E EHE+R WS+DFS +P+ML SGSDD V
Sbjct: 629 SQVVTEMREHERRVWSIDFSSADPTMLASGSDDGSV 664
>gi|359489834|ref|XP_002276685.2| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Vitis vinifera]
Length = 1072
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 103/149 (69%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
+ F L F RY + V LR+GD+ +SAN+ S+ FDRD A AGVS++IK+F+
Sbjct: 728 IGAFFEGLCKFARYGKFEVRGTLRNGDLLNSANVTCSLSFDRDQDYIAAAGVSKKIKIFE 787
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F +++N+ D+H PVVEM +SKLSC+ WN + KN +AS+DY+G+V +WD +T + +Y
Sbjct: 788 FDALLNDSVDIHYPVVEMSNKSKLSCVCWNNYIKNYLASTDYDGVVQMWDASTGEGFSQY 847
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EH+KRAWSVDFS +P+ SGSDDC V
Sbjct: 848 TEHQKRAWSVDFSPVDPTKFASGSDDCSV 876
>gi|115465541|ref|NP_001056370.1| Os05g0571000 [Oryza sativa Japonica Group]
gi|52353524|gb|AAU44090.1| unknown protein [Oryza sativa Japonica Group]
gi|113579921|dbj|BAF18284.1| Os05g0571000 [Oryza sativa Japonica Group]
gi|222632622|gb|EEE64754.1| hypothetical protein OsJ_19610 [Oryza sativa Japonica Group]
Length = 1144
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 179/363 (49%), Gaps = 67/363 (18%)
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
+SLL + K + E + +LL FL L+++K ++ DL ++ DI VE+
Sbjct: 636 LSLL-DNKTPVAVNEEDTESGLLLGFLSQLKEEKEMHAAKLSADLASLETDIAEVEK--- 691
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
R+S+++ +D + + S+ + +S A GG+S L
Sbjct: 692 -------RHSMRMGFSLEDMD--------VLAGSNDLSGASACALGGASLSGL------- 729
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQM----AN 323
S C S + ++RV L+ Y R + AN
Sbjct: 730 -----------------PPSLCR-----SSIYEERVMRNLEQLENAYYSMRSTIDTSEAN 767
Query: 324 -------------QPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG 370
Q + SD N I + G F L + RYSR V L++
Sbjct: 768 IIKRVDNDALRVRQNFHELHSDANAIDEQADPLGW--FFDGLCKYARYSRFEVRGILKNA 825
Query: 371 DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSC 430
DI +S N++ S+ FDRD++ FA AGVS++IK+F+F +++N+ D+H P++EMP++SKLSC
Sbjct: 826 DILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSKLSC 885
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ WN + KN +AS+DY+G V +WD ++ Q ++ EH KRAWSV FS +P+ L SGSDD
Sbjct: 886 VCWNSYIKNYLASTDYDGTVQLWDASSGQGFTQFTEHRKRAWSVSFSEVDPTKLASGSDD 945
Query: 491 CKV 493
C V
Sbjct: 946 CCV 948
>gi|413939109|gb|AFW73660.1| hypothetical protein ZEAMMB73_704258 [Zea mays]
Length = 163
Score = 172 bits (435), Expect = 5e-40, Method: Composition-based stats.
Identities = 84/140 (60%), Positives = 101/140 (72%), Gaps = 14/140 (10%)
Query: 9 VVPAV-KPDMKPSSTDTA------------PQETDAAAAYTAAASTSEVGVSELDKDMLC 55
+VP+V KP+ PS DT+ P+E AA + +E G D+D+LC
Sbjct: 10 LVPSVPKPEPAPSG-DTSAAAAATTAALAMPEEAGMRAASASPQGPAEEGEGPADRDLLC 68
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS 115
PICM +IK+AFLTACGHSFCYMCI+THL NKSDCPCCGHYLT QLYPNFLLDK+LKK S
Sbjct: 69 PICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKIS 128
Query: 116 ARQISKTASPLENFRQALQQ 135
A+QI+KTASP++ FR ALQQ
Sbjct: 129 AQQIAKTASPIDQFRCALQQ 148
>gi|297745400|emb|CBI40480.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 103/149 (69%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
+ F L F RY + V LR+GD+ +SAN+ S+ FDRD A AGVS++IK+F+
Sbjct: 460 IGAFFEGLCKFARYGKFEVRGTLRNGDLLNSANVTCSLSFDRDQDYIAAAGVSKKIKIFE 519
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F +++N+ D+H PVVEM +SKLSC+ WN + KN +AS+DY+G+V +WD +T + +Y
Sbjct: 520 FDALLNDSVDIHYPVVEMSNKSKLSCVCWNNYIKNYLASTDYDGVVQMWDASTGEGFSQY 579
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EH+KRAWSVDFS +P+ SGSDDC V
Sbjct: 580 TEHQKRAWSVDFSPVDPTKFASGSDDCSV 608
>gi|218197299|gb|EEC79726.1| hypothetical protein OsI_21053 [Oryza sativa Indica Group]
Length = 1144
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 179/363 (49%), Gaps = 67/363 (18%)
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
+SLL + K + E + +LL FL L+++K ++ DL ++ DI VE+
Sbjct: 636 LSLL-DNKTPVAVNEEDTESGLLLGFLSQLKEEKEMHAAKLSADLASLETDIAEVEK--- 691
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
R+S+++ +D + + S+ + +S A GG+S L
Sbjct: 692 -------RHSMRMGFSLEDMD--------VLAGSNDLSGASACALGGASLSGL------- 729
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQM----AN 323
S C S + ++RV L+ Y R + AN
Sbjct: 730 -----------------PPSLCR-----SSIYEERVMRNLEQLENAYYSMRSTIDTSEAN 767
Query: 324 -------------QPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHG 370
Q + SD N I + G F L + RYSR V L++
Sbjct: 768 IIKRVDNDALRVRQNFHELHSDANAIDEQADPLGC--FFDGLCKYARYSRFEVRGILKNA 825
Query: 371 DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSC 430
DI +S N++ S+ FDRD++ FA AGVS++IK+F+F +++N+ D+H P++EMP++SKLSC
Sbjct: 826 DILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSKLSC 885
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ WN + KN +AS+DY+G V +WD ++ Q ++ EH KRAWSV FS +P+ L SGSDD
Sbjct: 886 VCWNSYIKNYLASTDYDGTVQLWDASSGQGFTQFTEHRKRAWSVSFSEVDPTKLASGSDD 945
Query: 491 CKV 493
C V
Sbjct: 946 CCV 948
>gi|4559377|gb|AAD23037.1| putative photomorphogenesis repressor protein [Arabidopsis
thaliana]
Length = 532
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 126/227 (55%), Gaps = 19/227 (8%)
Query: 286 DSQCLNQSGLSV--VRKKRVHAQFNDLQECYLQKRRQM-ANQPHTKQESDKNIIHR---- 338
D C S L V R+ + L++ Y R Q+ + SDK + R
Sbjct: 110 DEHCTTSSALFVPTANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTLKDRDRCS 169
Query: 339 EGYNAG------------LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDR 386
E N L F L F RYS+ +R GD+ +SA++V S+ FD
Sbjct: 170 ENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDP 229
Query: 387 DDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDY 446
D++ A AG+S++IK+FDF + +NE VH P+VEM +SKLSC+ WN + KN +AS+DY
Sbjct: 230 DEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDY 289
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+G+V +WD T Q +Y EH+KRAWSVDFS ++P+ VSGSDDC V
Sbjct: 290 DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 336
>gi|255585740|ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 889
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
Query: 337 HREGYNAG-LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAG 395
H E +G ++ F L + +++L++ A+L+ GD+ +S+N+V S+ FDRD + FATAG
Sbjct: 539 HVESRQSGWISPFLEGLCKYLSFNKLKIKADLKQGDLLNSSNLVCSLSFDRDGEFFATAG 598
Query: 396 VSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
V+++IK+F+ +++NE D+H PVVE+ TRSKLS + WN + K++IASS++EG+V VWD+
Sbjct: 599 VNKKIKIFECDAIINENRDIHYPVVEIATRSKLSSVCWNSYIKSQIASSNFEGVVQVWDI 658
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T Q + E EHE+R WS+DFS +P+ L SGSDDC V
Sbjct: 659 TRSQVLTEMREHERRVWSIDFSSADPTTLASGSDDCSV 696
>gi|30690337|ref|NP_182157.2| protein SUPPRESSOR OF PHYA-105 1 [Arabidopsis thaliana]
gi|75337885|sp|Q9SYX2.1|SPA1_ARATH RecName: Full=Protein SUPPRESSOR OF PHYA-105 1
gi|4809171|gb|AAD30124.1|AF135455_1 phytochrome A supressor spa1 [Arabidopsis thaliana]
gi|330255587|gb|AEC10681.1| protein SUPPRESSOR OF PHYA-105 1 [Arabidopsis thaliana]
Length = 1029
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 126/227 (55%), Gaps = 19/227 (8%)
Query: 286 DSQCLNQSGLSV--VRKKRVHAQFNDLQECYLQKRRQM-ANQPHTKQESDKNIIHR---- 338
D C S L V R+ + L++ Y R Q+ + SDK + R
Sbjct: 607 DEHCTTSSALFVPTANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTLKDRDRCS 666
Query: 339 EGYNAG------------LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDR 386
E N L F L F RYS+ +R GD+ +SA++V S+ FD
Sbjct: 667 ENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDP 726
Query: 387 DDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDY 446
D++ A AG+S++IK+FDF + +NE VH P+VEM +SKLSC+ WN + KN +AS+DY
Sbjct: 727 DEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDY 786
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+G+V +WD T Q +Y EH+KRAWSVDFS ++P+ VSGSDDC V
Sbjct: 787 DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 833
>gi|110742626|dbj|BAE99225.1| putative photomorphogenesis repressor protein [Arabidopsis
thaliana]
Length = 1029
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 126/227 (55%), Gaps = 19/227 (8%)
Query: 286 DSQCLNQSGLSV--VRKKRVHAQFNDLQECYLQKRRQM-ANQPHTKQESDKNIIHR---- 338
D C S L V R+ + L++ Y R Q+ + SDK + R
Sbjct: 607 DEHCTTSSALFVPTANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTLKDRDRCS 666
Query: 339 EGYNAG------------LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDR 386
E N L F L F RYS+ +R GD+ +SA++V S+ FD
Sbjct: 667 ENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDP 726
Query: 387 DDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDY 446
D++ A AG+S++IK+FDF + +NE VH P+VEM +SKLSC+ WN + KN +AS+DY
Sbjct: 727 DEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDY 786
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+G+V +WD T Q +Y EH+KRAWSVDFS ++P+ VSGSDDC V
Sbjct: 787 DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 833
>gi|145340093|ref|NP_192849.4| protein SPA1-related 2 [Arabidopsis thaliana]
gi|223635833|sp|Q9T014.2|SPA2_ARATH RecName: Full=Protein SPA1-RELATED 2
gi|332657574|gb|AEE82974.1| protein SPA1-related 2 [Arabidopsis thaliana]
Length = 1036
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 105/149 (70%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
+ F L + RYS+ LR ++ +++N++ S+ FDRD+ FATAGVS++IK+++
Sbjct: 692 VGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYE 751
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F S+ NE D+H P +EMP RSKLS + WN + +N +ASSDY+GIV +WDVTT Q++ +
Sbjct: 752 FNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHF 811
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHEKRAWSVDFS P+ L SGSDDC V
Sbjct: 812 IEHEKRAWSVDFSEACPTKLASGSDDCSV 840
>gi|297828353|ref|XP_002882059.1| suppressor of phya-105 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327898|gb|EFH58318.1| suppressor of phya-105 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1028
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 103/149 (69%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F L F RYS+ +R GD+ +SA++V S+ FD D++ A AG+S++IK+FD
Sbjct: 684 LEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFD 743
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F + +NE VH P+VEM +SKLSC+ WN + KN +AS+DY+G+V +WD T Q +Y
Sbjct: 744 FNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQY 803
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EH+KRAWSVDFS ++P+ VSGSDDC V
Sbjct: 804 TEHQKRAWSVDFSPSDPTKFVSGSDDCSV 832
>gi|356540404|ref|XP_003538679.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 1103
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 119/197 (60%), Gaps = 13/197 (6%)
Query: 310 LQECYLQKRRQMA-NQPHTKQESDKNII-HREGYNAG-----------LADFQSVLTTFT 356
L+ Y R ++ ++ DK+I+ +RE +N L F L +
Sbjct: 711 LESAYFSMRSKLQLSETDASTHPDKDILRNRENWNVAEKSEEQPKKDTLGAFFDGLCKYA 770
Query: 357 RYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
RY + V LR+ D + AN++ S+ FDRD FA+AG+S++IK+F+F+++ N+ D+H
Sbjct: 771 RYCKFEVRGVLRNADFNNPANVICSLSFDRDADYFASAGISKKIKIFEFSALCNDSVDIH 830
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P VEM RSKLSC+ WN + KN +AS+DY+GIV +WD +T Q ++ EHEKRAWSVDF
Sbjct: 831 YPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKLWDASTGQEFSQFTEHEKRAWSVDF 890
Query: 477 SRTEPSMLVSGSDDCKV 493
S P+ SGSDDC V
Sbjct: 891 SAVCPTKFASGSDDCTV 907
>gi|110738246|dbj|BAF01052.1| COP1 like protein [Arabidopsis thaliana]
Length = 1100
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 105/149 (70%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
+ F L + RYS+ LR ++ +++N++ S+ FDRD+ FATAGVS++IK+++
Sbjct: 756 VGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYE 815
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F S+ NE D+H P +EMP RSKLS + WN + +N +ASSDY+GIV +WDVTT Q++ +
Sbjct: 816 FNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHF 875
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHEKRAWSVDFS P+ L SGSDDC V
Sbjct: 876 IEHEKRAWSVDFSEACPTKLASGSDDCSV 904
>gi|294464327|gb|ADE77676.1| unknown [Picea sitchensis]
Length = 347
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 109/152 (71%)
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
N L F L + R+S+ V A L GD+ +++N+V S+ FDRD +LFATAGV++RIK
Sbjct: 2 NDRLGSFFDSLCKYLRFSKFEVKANLNQGDLLNTSNLVCSLSFDRDKELFATAGVNKRIK 61
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF+ +++N+ D++ PV+EM +SK S + WN KN+IASSD+EG+V +WD T Q +
Sbjct: 62 VFECDTILNDNMDINYPVIEMIGKSKFSNVCWNSHIKNQIASSDFEGVVRIWDATRSQPI 121
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
M+Y+EH KR WSVDFS+++P+ L SGSDDC V
Sbjct: 122 MDYKEHGKRVWSVDFSQSDPTKLASGSDDCTV 153
>gi|3600059|gb|AAC35546.1| contains similarity to WB domains, G-beta repeats (Pfam:
G-beta.hmm, score: 14.83 and 23.03) [Arabidopsis
thaliana]
Length = 479
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 104/146 (71%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L + RYS+ LR ++ +++N++ S+ FDRD+ FATAGVS++IK+++F S
Sbjct: 102 FFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNS 161
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
+ NE D+H P +EMP RSKLS + WN + +N +ASSDY+GIV +WDVTT Q++ + EH
Sbjct: 162 LFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEH 221
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
EKRAWSVDFS P+ L SGSDDC V
Sbjct: 222 EKRAWSVDFSEACPTKLASGSDDCSV 247
>gi|357452949|ref|XP_003596751.1| SPA1-like protein [Medicago truncatula]
gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula]
Length = 875
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
R+ +A + F L + +S+L+V A+L+ GD+ HS+N+V S+ FDRD + FATAGV+
Sbjct: 527 RDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVN 586
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IK+F+ +++ D+H PVVEM RSKLS L WN + K++IASS++EG+V +WDVT
Sbjct: 587 KKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTR 646
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q + E EHE+R WS+DFS +P+ML SGSDD V
Sbjct: 647 SQILSEMREHERRVWSIDFSSADPTMLASGSDDGSV 682
>gi|357519507|ref|XP_003630042.1| SPA1-like protein [Medicago truncatula]
gi|355524064|gb|AET04518.1| SPA1-like protein [Medicago truncatula]
Length = 814
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
R+ +A + F L + +S+L+V A+L+ GD+ HS+N+V S+ FDRD + FATAGV+
Sbjct: 530 RDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVN 589
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IK+F+ +++ D+H PVVEM RSKLS L WN + K++IASS++EG+V +WDVT
Sbjct: 590 KKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTR 649
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Q + E EHE+R WS+DFS +P+ML SGSDD V
Sbjct: 650 SQILSEMREHERRVWSIDFSSADPTMLASGSDDGSV 685
>gi|297809331|ref|XP_002872549.1| hypothetical protein ARALYDRAFT_911432 [Arabidopsis lyrata subsp.
lyrata]
gi|297318386|gb|EFH48808.1| hypothetical protein ARALYDRAFT_911432 [Arabidopsis lyrata subsp.
lyrata]
Length = 1032
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 103/149 (69%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
+ F L + RYS+ LR ++ ++N++ S+ FDRD+ F TAGVS++IK+++
Sbjct: 688 VGAFFDGLCKYARYSKFETRGVLRTSELNSTSNVICSLGFDRDEDYFVTAGVSKKIKIYE 747
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F S+ NE D+H P VEMP RSKLS + WN + +N +ASSDY+GIV +WDVTT Q++ +
Sbjct: 748 FNSLFNESVDIHYPAVEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHF 807
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHEKRAWSVDFS P+ L SGSDDC V
Sbjct: 808 IEHEKRAWSVDFSEACPTKLASGSDDCSV 836
>gi|356495711|ref|XP_003516717.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 1129
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 13/214 (6%)
Query: 293 SGLSVVRKKRVHAQFNDLQECYLQKRRQMA-NQPHTKQESDKNII-HREGYNAG------ 344
S +S K R+ L+ Y R ++ ++ DK+I+ +RE N
Sbjct: 720 SPISNSNKVRLMRSICHLEGAYFSTRSKLQLSETDASTHPDKDILRNRENQNVAQKSEEQ 779
Query: 345 -----LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRR 399
L F L + RY + V LR+ D + AN++ S+ FDRD FA+AG+SR+
Sbjct: 780 PKKDTLGVFFDGLCKYARYCKFEVRGVLRNVDFNNPANVICSLSFDRDADYFASAGISRK 839
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
IK+F+F+++ N+ D+H P VEM RSKLSC+ WN + KN +AS+DY+GIV +WD +T Q
Sbjct: 840 IKIFEFSALCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKLWDASTGQ 899
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
++ EHEKRAWSVDFS P+ SGSDDC V
Sbjct: 900 EFSQFTEHEKRAWSVDFSAVCPTKFASGSDDCTV 933
>gi|224130490|ref|XP_002320850.1| predicted protein [Populus trichocarpa]
gi|222861623|gb|EEE99165.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 166/326 (50%), Gaps = 39/326 (11%)
Query: 169 ILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSN 228
+L FL L++QK ++ D+ ++EDI VE+ + L + + R L DS
Sbjct: 475 LLHHFLSLLKEQKQKHEAKLLVDIECLEEDIKEVEKRHL-LRTPKIVSETQERCL--DSR 531
Query: 229 TRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQ 288
+ + S+ +SS ++ AR + ++N ++Q + S SD
Sbjct: 532 EQDLYPGSVAISSSFSVSKKNEARLSRNINQIKNAYFSMRSQI-----RHTSSAPPSDKD 586
Query: 289 CL-NQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLAD 347
L N+ L V Q+N R+ +N T Q SD L
Sbjct: 587 LLKNRDSLPAV-------QYN----------REDSN---TNQRSDDP----------LGA 616
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L F YSR V L++GD S N+V ++ FDRD+ A AGVS++IKVF+F +
Sbjct: 617 FFEGLCKFASYSRFEVCGSLKNGDFMSSTNVVCTLSFDRDEDYIAAAGVSKKIKVFEFGA 676
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
++N+ D+H P VEM +SK+S + WN + KN +AS+DY+G+V +WD T Q +Y EH
Sbjct: 677 LLNDSIDIHYPTVEMSNKSKISSVCWNNYIKNYLASTDYDGVVQMWDAGTGQIFSQYTEH 736
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
+KRAWSVDFS +P M SGSDDC V
Sbjct: 737 QKRAWSVDFSLADPMMFASGSDDCSV 762
>gi|384246880|gb|EIE20368.1| WD40 repeat-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 349
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 107/149 (71%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L+ F S L+ F RYS+L+V A L++GD+ HSA+++ SI FDRDD+ FATAGVSRRIKV+
Sbjct: 1 LSAFTSDLSKFVRYSKLKVKATLQYGDMMHSADMLCSISFDRDDEYFATAGVSRRIKVYA 60
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
+ V+ + VHCP +EM +RSKLSC+ WN + K+ + ++DY+G + +WD T +
Sbjct: 61 TSDVLESNSAVHCPRLEMASRSKLSCVVWNSYIKHLLLAADYDGCLALWDAETNTCTATF 120
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EEH KR WS DFS+++P+ VSGSDD V
Sbjct: 121 EEHAKRVWSADFSQSDPTRFVSGSDDGTV 149
>gi|413948534|gb|AFW81183.1| hypothetical protein ZEAMMB73_790006 [Zea mays]
Length = 1121
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 183/361 (50%), Gaps = 65/361 (18%)
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRI 207
+SLL + + +++ E ++ LL+FL L+++K + ++ +L ++ DI ++R
Sbjct: 615 LSLLDKSPVSISEDDTESSL--LLNFLSQLKEEKEMQAAKLSAELGSLQTDITEIDR--- 669
Query: 208 DLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDG 267
R+S +R+ +D + + +SSL G+S +LQ G
Sbjct: 670 -------RHSAGMRLSLEDMDV--------------LPSSSLP---GASVSALQGALLSG 705
Query: 268 KAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQM--ANQP 325
L S S + ++RV L+ Y R +
Sbjct: 706 ---------------------LLPASCKSSIYEERVMRNLVQLENAYYSMRSSVDTCETN 744
Query: 326 HTKQESDKNIIHREGYNAGLAD-------------FQSVLTTFTRYSRLRVIAELRHGDI 372
K+ ++ + RE ++ +D F L + R++R V L++ D+
Sbjct: 745 VIKRPDNEALRVRENFHQRHSDSDAKGEKTDRLGCFFDGLCKYARHNRFEVRGILKNADV 804
Query: 373 FHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLS 432
S N++ S+ FDRD++ FA AGVS++IK+F+F +++N+ D+H P+VEMP++SKLSC+
Sbjct: 805 LSSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLVEMPSKSKLSCVC 864
Query: 433 WNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
WN + KN +AS+DY+G V +WD + Q ++ EH KRAWSV FS+ +P+ L SGSDDC
Sbjct: 865 WNSYIKNYLASTDYDGTVQLWDAGSGQGFTQFTEHRKRAWSVSFSQVDPTKLASGSDDCC 924
Query: 493 V 493
V
Sbjct: 925 V 925
>gi|118485594|gb|ABK94648.1| unknown [Populus trichocarpa]
Length = 389
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 4/179 (2%)
Query: 315 LQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFH 374
L+ R + + +++S+ N + + L F L F YSR V L++GD
Sbjct: 19 LKNRDSLPAVQYNREDSNTN----QRSDDPLGAFFEGLCKFASYSRFEVCGSLKNGDFMS 74
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWN 434
S N+V ++ FDRD+ A AGVS++IKVF+F +++N+ D+H P VEM +SK+S + WN
Sbjct: 75 STNVVCTLSFDRDEDYIAAAGVSKKIKVFEFGALLNDSIDIHYPTVEMSNKSKISSVCWN 134
Query: 435 KFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ KN +AS+DY+G+V +WD T Q +Y EH+KRAWSVDFS +P M SGSDDC V
Sbjct: 135 NYIKNYLASTDYDGVVQMWDAGTGQIFSQYTEHQKRAWSVDFSLADPMMFASGSDDCSV 193
>gi|222619188|gb|EEE55320.1| hypothetical protein OsJ_03317 [Oryza sativa Japonica Group]
Length = 797
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 121/209 (57%), Gaps = 23/209 (11%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR------------------EG 340
+ R+ F L+ Y R ++A Q S ++ R EG
Sbjct: 392 KSSRLMKNFKKLETAYFLTRSKLAKQVGNPVSSCHQVVKRTTGSPVVTEGSSIDDFALEG 451
Query: 341 Y-----NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAG 395
+ + F L ++ +S+L+V AEL+ D+ +S+N+V S+ FDRD + FATAG
Sbjct: 452 HYGTRQRGWMNSFLEGLCSYLSFSKLKVKAELKQCDLLNSSNLVCSVGFDRDKEFFATAG 511
Query: 396 VSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
V+++IKVF++ +VNE D+H PVVEM RSKLSC+ WN + K+ IASSD+EGIV VWDV
Sbjct: 512 VNKKIKVFEYNMIVNEHCDIHYPVVEMSNRSKLSCICWNSYMKSHIASSDFEGIVQVWDV 571
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSML 484
T Q +E EHE+R WSVDFS +P+ L
Sbjct: 572 TRSQVFVEMREHERRVWSVDFSLADPTKL 600
>gi|444705398|gb|ELW46827.1| E3 ubiquitin-protein ligase RFWD2 [Tupaia chinensis]
Length = 297
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 126/211 (59%), Gaps = 31/211 (14%)
Query: 299 RKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTR 357
R+KR+ A F DL++CY R ++++ T + D +FQ L+ FTR
Sbjct: 98 RRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD--------------EFQECLSKFTR 143
Query: 358 YSRLRVIAELRHG-DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
Y+ +R +A L + D+++ ++IVSSIEFDRD FA AGV+++IKV+++ +V+ + D+H
Sbjct: 144 YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH 203
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ---------------SV 461
P EM SK+SC+SW+ + KN +ASSDYEG V +WD T Q S
Sbjct: 204 YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQIGILFESTLSF 263
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
+EHEKR WSVDF+ +P +L SGSDD K
Sbjct: 264 FYIQEHEKRCWSVDFNLMDPKLLASGSDDAK 294
>gi|218188984|gb|EEC71411.1| hypothetical protein OsI_03584 [Oryza sativa Indica Group]
Length = 793
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 129/227 (56%), Gaps = 25/227 (11%)
Query: 281 SLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHR-- 338
S T S + +S LS + R+ F L+ Y R ++A Q S ++ R
Sbjct: 372 SGTVPSSVLIQESVLS--KSSRLMKNFKKLETAYFLTRSKLARQVGNPVSSCHQVVKRTT 429
Query: 339 ----------------EGY-----NAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSAN 377
EG+ + F L ++ +S+L+V AEL+ D+ +S+N
Sbjct: 430 GSPVVTEGSSIDDFALEGHYGTRQRGWMNSFLEGLCSYLSFSKLKVKAELKQCDLLNSSN 489
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFS 437
+V S+ FDRD + FATAGV+++IKVF++ +VNE D+H PVVEM RSKLSC+ WN +
Sbjct: 490 LVCSVGFDRDKEFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSKLSCICWNSYM 549
Query: 438 KNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSML 484
K+ IASSD+EGIV VWDVT Q +E EHE+R WSVDFS +P+ L
Sbjct: 550 KSHIASSDFEGIVQVWDVTRSQVFVEMREHERRVWSVDFSLADPTKL 596
>gi|9454536|gb|AAF87859.1|AC022520_3 Unknown protein [Arabidopsis thaliana]
Length = 763
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 107/143 (74%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L + +S+LRV A+L+ GD+ +S+N+V +I FDRD + FATAGV+++IK+F+ S
Sbjct: 430 FLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECES 489
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
++ + D+H PVVE+ +RSKLS + WN + K+++ASS++EG+V VWDV Q V E +EH
Sbjct: 490 IIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEH 549
Query: 468 EKRAWSVDFSRTEPSMLVSGSDD 490
EKR WS+D+S +P++L SGSDD
Sbjct: 550 EKRVWSIDYSSADPTLLASGSDD 572
>gi|356514725|ref|XP_003526054.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 804
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
Query: 319 RQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANI 378
R AN+ K+ S REG + F L + +S+L+V A+L+ GD+ S+N+
Sbjct: 443 RNCANKVELKEMS------REGKSLWTNPFLEGLCKYLSFSKLKVKADLKQGDLLQSSNL 496
Query: 379 VSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSK 438
V S+ FDRD + FATAGV+++IKVF+ + +NE D+H PVVEM +RS LS WN + K
Sbjct: 497 VCSLSFDRDAEFFATAGVNKKIKVFECNTTINEYRDIHYPVVEMVSRSTLSSTCWNTYIK 556
Query: 439 NRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
++IASS++EG+V +WDVT Q E +EHE+R WS+DFS +P++L SGSDD V
Sbjct: 557 SQIASSNFEGVVQLWDVTRSQVQSEMKEHERRVWSIDFSSADPTLLASGSDDGSV 611
>gi|15219179|ref|NP_175717.1| SPA1-related 4 protein [Arabidopsis thaliana]
gi|30695417|ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana]
gi|75332075|sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4
gi|14532798|gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis
thaliana]
gi|22136946|gb|AAM91817.1| putative phytochrome A supressor spa1 protein [Arabidopsis
thaliana]
gi|332194767|gb|AEE32888.1| SPA1-related 4 protein [Arabidopsis thaliana]
gi|332194768|gb|AEE32889.1| SPA1-related 4 protein [Arabidopsis thaliana]
Length = 794
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 108/146 (73%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L + +S+LRV A+L+ GD+ +S+N+V +I FDRD + FATAGV+++IK+F+ S
Sbjct: 456 FLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECES 515
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
++ + D+H PVVE+ +RSKLS + WN + K+++ASS++EG+V VWDV Q V E +EH
Sbjct: 516 IIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEH 575
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
EKR WS+D+S +P++L SGSDD V
Sbjct: 576 EKRVWSIDYSSADPTLLASGSDDGSV 601
>gi|75335085|sp|Q9LJR3.1|SPA3_ARATH RecName: Full=Protein SPA1-RELATED 3
gi|9294263|dbj|BAB02165.1| photomorphogenesis repressor protein-like [Arabidopsis thaliana]
gi|330688323|gb|AEC32932.1| SPA3 isoform 1 [Arabidopsis thaliana]
Length = 845
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 185/376 (49%), Gaps = 61/376 (16%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
L E++ +E + + LL+FL ++++K + +Q + + DI V + ++ L
Sbjct: 304 LEEREAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILK 363
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKN----SSGIITSSLNARGGSSAGSLQNKKGD 266
+ R S LS K+ +SG S A SA K+
Sbjct: 364 K------------------RGSSLSDFSKDDHQYTSGQPLMSFQANEEPSAFLASRKRVR 405
Query: 267 GKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECY-LQKRRQMANQP 325
A +G + + GS +++ R+ F L+ Y L +RRQM
Sbjct: 406 QGILALENGVEVDEESQGS----------TLLESSRLMRNFKKLESVYFLTRRRQMKAAA 455
Query: 326 -------HTKQESD--------------------KNIIHREGYNAGLAD-FQSVLTTFTR 357
H+ S+ K + + G D F L +
Sbjct: 456 SGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLS 515
Query: 358 YSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHC 417
+S+LRV A+L+ GD+ +S+N+V ++ FDR+ +LFATAGV+++IK+F+ S+VN+ D+H
Sbjct: 516 FSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHY 575
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
PVVE+ RSKLS L WN + K++IASS+++G+V +WDV Q V E +EH+KR WS+D S
Sbjct: 576 PVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDIS 635
Query: 478 RTEPSMLVSGSDDCKV 493
+P++L SGSDD V
Sbjct: 636 SADPTLLASGSDDGTV 651
>gi|330688325|gb|AEC32933.1| SPA3 isoform 2 [Arabidopsis thaliana]
Length = 662
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 185/376 (49%), Gaps = 61/376 (16%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
L E++ +E + + LL+FL ++++K + +Q + + DI V + ++ L
Sbjct: 304 LEEREAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILK 363
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKN----SSGIITSSLNARGGSSAGSLQNKKGD 266
+ R S LS K+ +SG S A SA K+
Sbjct: 364 K------------------RGSSLSDFSKDDHQYTSGQPLMSFQANEEPSAFLASRKRVR 405
Query: 267 GKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECY-LQKRRQMANQP 325
A +G + + GS +++ R+ F L+ Y L +RRQM
Sbjct: 406 QGILALENGVEVDEESQGS----------TLLESSRLMRNFKKLESVYFLTRRRQMKAAA 455
Query: 326 -------HTKQESD--------------------KNIIHREGYNAGLAD-FQSVLTTFTR 357
H+ S+ K + + G D F L +
Sbjct: 456 SGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLS 515
Query: 358 YSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHC 417
+S+LRV A+L+ GD+ +S+N+V ++ FDR+ +LFATAGV+++IK+F+ S+VN+ D+H
Sbjct: 516 FSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHY 575
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
PVVE+ RSKLS L WN + K++IASS+++G+V +WDV Q V E +EH+KR WS+D S
Sbjct: 576 PVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDIS 635
Query: 478 RTEPSMLVSGSDDCKV 493
+P++L SGSDD V
Sbjct: 636 SADPTLLASGSDDGTV 651
>gi|356527668|ref|XP_003532430.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 1012
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 99/150 (66%)
Query: 344 GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
L F L + RYS+ V LR+ D + AN++ S+ FDRD+ FA AG+S++IK+F
Sbjct: 667 ALGAFFDSLCKYARYSKFEVRGILRNTDFNNPANVICSLSFDRDEDYFAAAGISKKIKIF 726
Query: 404 DFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVME 463
+F ++ N+ D+H PVVEM RS+LSC+ WN + +N +AS+DY+G V +WD T Q
Sbjct: 727 EFNALFNDSIDIHYPVVEMSNRSRLSCVCWNNYIQNYLASTDYDGAVKLWDANTGQGFSR 786
Query: 464 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ EHEKRAWSVDFS P+ SGSDDC V
Sbjct: 787 FTEHEKRAWSVDFSLLCPTKFASGSDDCSV 816
>gi|22331100|ref|NP_683567.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana]
gi|332642126|gb|AEE75647.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana]
Length = 837
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 184/373 (49%), Gaps = 61/373 (16%)
Query: 151 LSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLY 210
L E++ +E + + LL+FL ++++K + +Q + + DI V + ++ L
Sbjct: 304 LEEREAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILK 363
Query: 211 RARDRYSVKLRMLGDDSNTRKSWLSSIDKN----SSGIITSSLNARGGSSAGSLQNKKGD 266
+ R S LS K+ +SG S A SA K+
Sbjct: 364 K------------------RGSSLSDFSKDDHQYTSGQPLMSFQANEEPSAFLASRKRVR 405
Query: 267 GKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECY-LQKRRQMANQP 325
A +G + + GS +++ R+ F L+ Y L +RRQM
Sbjct: 406 QGILALENGVEVDEESQGS----------TLLESSRLMRNFKKLESVYFLTRRRQMKAAA 455
Query: 326 -------HTKQESD--------------------KNIIHREGYNAGLAD-FQSVLTTFTR 357
H+ S+ K + + G D F L +
Sbjct: 456 SGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLS 515
Query: 358 YSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHC 417
+S+LRV A+L+ GD+ +S+N+V ++ FDR+ +LFATAGV+++IK+F+ S+VN+ D+H
Sbjct: 516 FSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHY 575
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
PVVE+ RSKLS L WN + K++IASS+++G+V +WDV Q V E +EH+KR WS+D S
Sbjct: 576 PVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDIS 635
Query: 478 RTEPSMLVSGSDD 490
+P++L SGSDD
Sbjct: 636 SADPTLLASGSDD 648
>gi|356511456|ref|XP_003524442.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 852
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 100/149 (67%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F L TRYS+ V +R+ D + AN++ S+ FDRD+ FA AG+S++IK+F+
Sbjct: 508 LGAFFDGLCKSTRYSKFEVRGIVRNTDFNNPANVICSLSFDRDEDYFAAAGISKKIKIFE 567
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
F ++ N+ D+H PVVEM RS+LSC+ WN + +N +AS+DY+G V +WD T Q +
Sbjct: 568 FNALFNDSIDIHYPVVEMSNRSRLSCVCWNNYIQNYLASTDYDGAVKLWDANTGQGFSGF 627
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EHEKRAWSVDFS P+ VSGSDDC V
Sbjct: 628 TEHEKRAWSVDFSLVCPTKFVSGSDDCSV 656
>gi|297847694|ref|XP_002891728.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337570|gb|EFH67987.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 786
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 107/146 (73%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L + +S+LRV A+L+ GD+ +S+N+V +I FDRD + FATAGV+++IK+F+ S
Sbjct: 448 FLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECES 507
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
++ + D+H PVVE+ +RSKLS + WN + K+++ASS++EG+V VWD Q V E +EH
Sbjct: 508 IIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDAARSQLVTEMKEH 567
Query: 468 EKRAWSVDFSRTEPSMLVSGSDDCKV 493
EKR WS+D+S +P++L SGSDD V
Sbjct: 568 EKRVWSIDYSSADPTLLASGSDDGSV 593
>gi|302786202|ref|XP_002974872.1| hypothetical protein SELMODRAFT_101639 [Selaginella moellendorffii]
gi|300157767|gb|EFJ24392.1| hypothetical protein SELMODRAFT_101639 [Selaginella moellendorffii]
Length = 283
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 90/103 (87%)
Query: 391 FATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIV 450
FATAGVSRRIKVF++++VVN ADVH P +E+P+R+KLSCLSWNK K+ IASSDY+G V
Sbjct: 1 FATAGVSRRIKVFEYSAVVNSSADVHYPAMEIPSRAKLSCLSWNKCIKHHIASSDYDGHV 60
Query: 451 TVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T+WDV QS+MEYEEH KRAWSVDF+RT+P++LVSGSDD K+
Sbjct: 61 TIWDVNNAQSIMEYEEHAKRAWSVDFARTDPNLLVSGSDDGKL 103
>gi|356545455|ref|XP_003541158.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 788
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 108/156 (69%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVS 397
REG + F L+ + +S+L+V A+L+ GD+ S+N+V S+ FDRD + FATAGV+
Sbjct: 440 REGKSPWTNPFLEGLSKYLSFSKLKVKADLKQGDLLQSSNLVCSLSFDRDAEYFATAGVN 499
Query: 398 RRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTT 457
++IKVF+ + +NE D+H PVVEM +RS LS WN + K++IASS++EG+V +WDVT
Sbjct: 500 KKIKVFECNTTINEDRDIHYPVVEMVSRSTLSSTCWNTYIKSQIASSNFEGVVQLWDVTR 559
Query: 458 QQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
E EHE+R WS+DFS +P++L SGSDD V
Sbjct: 560 SHVQSEMREHEQRVWSIDFSSADPTLLASGSDDGSV 595
>gi|356522530|ref|XP_003529899.1| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Glycine max]
Length = 1035
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 31/242 (12%)
Query: 278 RKDSLTGSDSQCLNQSGLSVVR--------KKRVHAQFNDLQECYLQKR-RQMANQPHTK 328
R DSL DS SG + R ++R + N L+ Y R R + + +
Sbjct: 602 RGDSLHFQDS-----SGSDISRSIRRLFGYEERYMSNINQLENSYFSSRFRVLPKEASSV 656
Query: 329 QESDKNIIHR-------EGYN----------AGLADFQSVLTTFTRYSRLRVIAELRHGD 371
+DKN++ E N L F L F RYS+ LR+ D
Sbjct: 657 SINDKNVMESRWRLPQVENVNKESRRIQSSVGCLGSFFEGLCKFARYSKFEECGRLRNRD 716
Query: 372 IFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCL 431
+ SAN++ ++ FDRD+ A GVS++IK+FD ++ ++ D+ PVVEM +SKLSC+
Sbjct: 717 LLSSANVMCALSFDRDEDHIAAGGVSKKIKIFDLNAISSDSVDIQYPVVEMSNKSKLSCV 776
Query: 432 SWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDC 491
WN + KN +AS+DY+G+V +WD T Q + +Y EH+KRAWSV FS ++P M SGSDDC
Sbjct: 777 CWNPYIKNHLASTDYDGVVQMWDADTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDC 836
Query: 492 KV 493
V
Sbjct: 837 SV 838
>gi|449017032|dbj|BAM80434.1| photoregulatory zinc-finger protein COP1 [Cyanidioschyzon merolae
strain 10D]
Length = 855
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 103/149 (69%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
L F L T T+Y+++R + LR+G+ F +NIVS ++FD +L A AGV R+IK+FD
Sbjct: 493 LEQFAHELCTATKYAQMRCLTLLRYGEPFRGSNIVSCLDFDMFGELLAAAGVMRKIKIFD 552
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEY 464
+VV+ A V P+ E+P R+KLSCLSW+ ++ IASSDY+G+V +WD + + V EY
Sbjct: 553 LHTVVDHDAQVKYPICELPARAKLSCLSWSPSTRQHIASSDYDGVVCIWDTESCKLVAEY 612
Query: 465 EEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
EEHEKRAW+VD+ +P +L SGSDD V
Sbjct: 613 EEHEKRAWTVDYCPMKPHILASGSDDGNV 641
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKL 110
K + CPIC + + A T CGH+FC+ CI+ H RN CP CG +LT +Q+ P+ + K
Sbjct: 107 KSLECPICFDLFRAAVTTRCGHTFCFSCIMRHFRNHKSCPVCGGFLTRDQIAPDSSVQKA 166
Query: 111 LKKTSARQISKTASP 125
++ +++ ASP
Sbjct: 167 VR------LAQAASP 175
>gi|297834396|ref|XP_002885080.1| hypothetical protein ARALYDRAFT_897813 [Arabidopsis lyrata subsp.
lyrata]
gi|297330920|gb|EFH61339.1| hypothetical protein ARALYDRAFT_897813 [Arabidopsis lyrata subsp.
lyrata]
Length = 837
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 132/226 (58%), Gaps = 29/226 (12%)
Query: 294 GLSVVRKKRVHAQFNDLQECY-LQKRRQMA----------NQPHTKQESDKNIIHREG-- 340
G +++ R+ F L+ Y L +RRQM + P + + ++I E
Sbjct: 423 GSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSS 482
Query: 341 ----------YN-----AGLAD-FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEF 384
YN G D F L + +S+LRV A+L+ GD+ +S+N+V ++ F
Sbjct: 483 VSNPAVPKDFYNHDLRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAF 542
Query: 385 DRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASS 444
DRD + FATAGV+++IK+F+ S+VN D+H PVVE+ RSKLS L WN + K++IASS
Sbjct: 543 DRDGEFFATAGVNKKIKIFECNSIVNNNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASS 602
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+++G+V +WDV Q V E +EH KR WS+D S +P++L SGSDD
Sbjct: 603 NFDGVVQIWDVARCQLVTEMKEHRKRVWSIDISSADPTLLASGSDD 648
>gi|356560290|ref|XP_003548426.1| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Glycine max]
Length = 1023
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 18/212 (8%)
Query: 300 KKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIHR-------EGYN--------- 342
++R + N L+ Y R R + + + ++KN++ E N
Sbjct: 615 EERFMSNLNQLENSYFSMRFRVLPKEASSVSSNEKNVMESRWRLPQVENVNKESRRIQSS 674
Query: 343 -AGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
+ F L F RYS+ LR+ D+ SAN++ ++ FDRD+ A GVS++IK
Sbjct: 675 VGCVGSFFEGLCKFARYSKFEECGRLRNRDLLSSANVMCALSFDRDEDHIAAGGVSKKIK 734
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
+FD ++ ++ D+ PV+EM +SKLSC+ WN + KN +AS+DY+G V +WD T Q +
Sbjct: 735 IFDLNAIASDSVDIQYPVIEMSNKSKLSCVCWNTYIKNHLASTDYDGAVQMWDADTGQPL 794
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+Y EH+KRAWSV FS ++P M SGSDDC V
Sbjct: 795 SQYMEHQKRAWSVHFSLSDPKMFASGSDDCSV 826
>gi|405977821|gb|EKC42254.1| E3 ubiquitin-protein ligase RFWD2 [Crassostrea gigas]
Length = 2317
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 112/197 (56%), Gaps = 39/197 (19%)
Query: 299 RKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNA--GLADFQSVLTTFT 356
R+KRV F DL++CY R+ ++ YN GL +F L+ FT
Sbjct: 172 RRKRVSQHFEDLEQCYFSIRQ------------------KDEYNGEEGLDEFTECLSKFT 213
Query: 357 RYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
+++ SIEFDRD FA AGV+++IKVF++ +V+ + D+H
Sbjct: 214 KFNSF-------------------SIEFDRDCDFFAIAGVTKKIKVFEYGTVIKDAVDIH 254
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
PV EM SK+SC++W+ + KN +ASSDYEG +T+WD T Q ++EHEKR WSVDF
Sbjct: 255 YPVNEMICNSKISCVTWSSYHKNVLASSDYEGTITLWDAFTGQKSKLFQEHEKRCWSVDF 314
Query: 477 SRTEPSMLVSGSDDCKV 493
+ +P +L SGSDD KV
Sbjct: 315 NTMDPKLLASGSDDAKV 331
>gi|303272107|ref|XP_003055415.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463389|gb|EEH60667.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 123/211 (58%), Gaps = 18/211 (8%)
Query: 295 LSVVRKKRVHAQFNDLQECYLQKR--RQMANQPHTKQESDKNIIHREGYNAGLADFQSVL 352
LS ++ RV A F +LQ+ Y + R ++ S+ + G L +F +++
Sbjct: 253 LSETKRARVLANFANLQDLYSKIRCGGFGGLGGGRRKSSEPSAAAARG---DLDEFANLM 309
Query: 353 TTFTRYSRLRVIAELRHGD-----IFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
+ T+Y R RV E+RHG+ +++IVSSIEFDRD FAT GVS+++ VF FA
Sbjct: 310 RSLTKYERARVAGEVRHGERNARLGAGASSIVSSIEFDRDYANFATGGVSKKVHVFSFAE 369
Query: 408 VVN--------EPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
D P+ + +SKLSCLS+NK N +ASSDYEG+VTVWDV
Sbjct: 370 ACGGVDGDRAASDVDAPGPIQTLDAKSKLSCLSYNKHVANHLASSDYEGVVTVWDVEAGV 429
Query: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+V E+EEH+KRAW+VD+ R +P +L SGSDD
Sbjct: 430 AVAEFEEHDKRAWTVDYCRVDPRILASGSDD 460
>gi|312384230|gb|EFR29000.1| hypothetical protein AND_02381 [Anopheles darlingi]
Length = 1283
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 104/151 (68%), Gaps = 2/151 (1%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRH-GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
L F+ L F++YS LR +A L + + +++ IVSSIEFD+D + FA AGV++RIK+F
Sbjct: 462 LDTFRENLIKFSKYSALRPLATLNYSNNSNYASTIVSSIEFDKDSEYFAIAGVTKRIKIF 521
Query: 404 DFASVVNEPA-DVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
D+ + + + A D++ P+ EM SK+SC+ WN + K +ASSDYEGIVT+WDV T+
Sbjct: 522 DYYTAIRDAAVDINYPINEMTCNSKISCVIWNTYFKQVLASSDYEGIVTIWDVVTRTCTK 581
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
YEEH+KR W VDF+ + +L SGSDD +V
Sbjct: 582 TYEEHDKRCWCVDFNEVDTRLLASGSDDARV 612
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL-TNNQLYPNFLLDKL 110
D LCPIC II EA +T CGH+FC+ CI + CP C L T + + PNF+L++L
Sbjct: 79 DFLCPICFDIINEAHITRCGHTFCHQCISRSIDVTKKCPKCNSPLATQDHILPNFVLNEL 138
Query: 111 LKKTSARQISKT---------ASPLENFRQALQQGCG---------------------VS 140
+ K + + P +A Q G G +S
Sbjct: 139 ITKHRLKMGMFGGGGGLQRNRSQPGMVSPKAGQPGLGDAIGSGEGDTLRHFLATESKKLS 198
Query: 141 VKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDIN 200
+ +++ ++ +L+++K +E E ++L +FL L KQK + +I ++ I+ D+
Sbjct: 199 LSDVNVMLEILTQRKTLLEAESCAAQNRLLHEFLKHLLKQKEQQQLQIANEIALIRSDLL 258
Query: 201 AVER 204
VE+
Sbjct: 259 EVEK 262
>gi|347970796|ref|XP_003436639.1| AGAP013233-PA [Anopheles gambiae str. PEST]
gi|333466835|gb|EGK96393.1| AGAP013233-PA [Anopheles gambiae str. PEST]
Length = 817
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRH-GDIFHSANIVSSIEFDRDDQLFATAGV 396
R + L F+ L F++YS LR +A L + D + + IVSSIEFD+D + FA AGV
Sbjct: 439 RSSGRSSLDTFRESLIKFSKYSALRPLATLNYSNDSNYVSTIVSSIEFDKDSEYFAIAGV 498
Query: 397 SRRIKVFDFASVVNEPA-DVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDV 455
++RIK+FD+ + + + A D++ P+ EM SK+SC+ WN + K +ASSDYEGIVT+WDV
Sbjct: 499 TKRIKIFDYYTAIRDAAVDINYPINEMTCNSKISCVIWNSYFKQVLASSDYEGIVTIWDV 558
Query: 456 TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
T+ +EEH+KR W VDF+ + +L SGSDD +V
Sbjct: 559 LTRTRTKTFEEHDKRCWCVDFNEVDTRLLASGSDDARV 596
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 36/195 (18%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQ-LYPN 104
V + D LCPIC II EA++T CGH+FC+ CI + CP C + L +++ + PN
Sbjct: 56 VDDKTNDFLCPICFDIINEAYITRCGHTFCHQCIARSIDVAKKCPKCNYPLASHEHIVPN 115
Query: 105 FLLDKLLKKTSARQIS-----------KTASPLENFRQALQQG-CG-------------- 138
FLL++L+ K + K++ P +N Q G CG
Sbjct: 116 FLLNELITKHRLKGGGGGGGGGLLHRHKSSQPGDNSPQFHTGGACGGGDANAGGEGDTLK 175
Query: 139 ---------VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQ 189
+S+ +++ ++ +L+++K +E E ++L +FL L KQK + +I
Sbjct: 176 HFLATESKKLSLSDVNVMLEILTQRKTLLEAESCAAQNRLLHEFLKHLLKQKEQQQLQIA 235
Query: 190 TDLHYIKEDINAVER 204
++ I+ D+ VE+
Sbjct: 236 NEIALIRSDLLDVEK 250
>gi|4850290|emb|CAB43046.1| COP1 like protein [Arabidopsis thaliana]
gi|7267810|emb|CAB81212.1| COP1 like protein [Arabidopsis thaliana]
Length = 1040
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 104/164 (63%), Gaps = 15/164 (9%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFD 404
+ F L + RYS+ LR ++ +++N++ S+ FDRD+ FATAGVS++IK+++
Sbjct: 645 VGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYE 704
Query: 405 FASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWD---------- 454
F S+ NE D+H P +EMP RSKLS + WN + +N +ASSDY+GIV V++
Sbjct: 705 FNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKVFEPLKFYVDCLS 764
Query: 455 -----VTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
++ Q++ + EHEKRAWSVDFS P+ L SGSDDC V
Sbjct: 765 LDYPFISFGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSV 808
>gi|51948346|gb|AAU14277.1| COP1-like protein [Ostreococcus tauri]
Length = 395
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 201/430 (46%), Gaps = 72/430 (16%)
Query: 55 CPICMQIIKEAFLTA-CGHSFCYMCIITHL--------RNKSDCPCCGHYLTNNQLYPNF 105
CPIC+ +A A CGH+FC+ C L + CP CG TN QL PN
Sbjct: 23 CPICLDPFSDAHCVATCGHTFCHACARATLDASASGGGERMAACPTCGSRFTNEQLVPNA 82
Query: 106 LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAER 165
++ ++ + + ++ ++ + L+ LSEK R++ E
Sbjct: 83 AVNGMVAEMRRMLEEEEEKAAAG---SIVADGADDLERLTPLVKKLSEKHRELVLESRAA 139
Query: 166 NMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGD 225
+ ++L +FL R +K + ++ +L + DINAV R ++L GD
Sbjct: 140 SREVLKEFLLESRARKEASAEALERELRCLSSDINAVRRE------------IQLLGGGD 187
Query: 226 DSNTRKSWLSS----IDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDS 281
DS + L S DK +IT ++ A G + G +
Sbjct: 188 DSEQLQDLLRSRGEVYDKE---VITRAMEALGLTRVGDI--------------------- 223
Query: 282 LTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGY 341
+++S +++RV QFN+LQ Y ++R + +D
Sbjct: 224 -------VVDES-----KRRRVLRQFNELQSWYSRRRCLEKTDDEGAEPADDAC---PSD 268
Query: 342 NAGLADFQSVLTTFTRYSRLRVIAEL--RHGDIFHSANIVSSIEFDRDDQLFATAGVSRR 399
+ + +F ++ TF R+S + + EL G ++ + +SSIEFD ++ FATAGVS+R
Sbjct: 269 SETIEEFSKLIDTFKRFSNITMATELVTTEGGGTNTGSPISSIEFDSTEENFATAGVSKR 328
Query: 400 IKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
I+ ++ V+ A P ++ T SKL+CLS+NK + IA+SDYEG+V++WDV ++
Sbjct: 329 IQFYNLERVL---AGSRQPAEQIMTHSKLTCLSYNKLIRQHIAASDYEGVVSIWDVEKKR 385
Query: 460 SVMEYEEHEK 469
+++++EEHE+
Sbjct: 386 AIIDFEEHEE 395
>gi|170586954|ref|XP_001898244.1| hypothetical protein [Brugia malayi]
gi|158594639|gb|EDP33223.1| conserved hypothetical protein [Brugia malayi]
Length = 598
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 206/447 (46%), Gaps = 81/447 (18%)
Query: 78 CIITHLRNKSDCPCCGHYL---TNNQLYPNF----LLDKLLKKT-SARQISKTASPLENF 129
CI HL CP C L + ++PNF ++D + + +AR ++ + E
Sbjct: 13 CISAHLERSLRCPVCSRGLDPRSGPIVFPNFTAASIVDAIRRNIKTARSLAAVSGRNEGL 72
Query: 130 RQALQQGCGVSVKE----IDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDEL 185
++ +++ +D M LL +++ ++ R +L +F+ + Q+ ++L
Sbjct: 73 ELTSEKLVDLALNADANFLDHFMDLLKKRREQISNNVTRRKNMLLNEFIDEMIAQREEKL 132
Query: 186 KEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGII 245
K++Q +L ++ D + S++ M D SN + + ++SG
Sbjct: 133 KQLQNELSILRND----------------KASIQAMMKDDSSNNAGTHSQRMVPDASG-- 174
Query: 246 TSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKDSLTGSDSQCLNQSGLSVVRKKRVHA 305
++ SA L+ + DG +D++ + + + R+
Sbjct: 175 -----SQIMQSASVLKKMRFDGG---------------DNDTEEIGK------YRSRLQQ 208
Query: 306 QFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIA 365
L++ Y +R N ++ +D ++ L DF VL ++Y R +A
Sbjct: 209 HMTGLEQAYFSRR---LNNTESRTITDDSL---GPCCDTLDDFSQVLHAMSQYGSFRRLA 262
Query: 366 ELRH--GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMP 423
L + D + +IVSSIEFD+D + F AGV++RIKV++F SV+ +H PV ++
Sbjct: 263 SLNYNVADATAALSIVSSIEFDKDGEYFILAGVAKRIKVYEFQSVIENTDTLHYPVTQLQ 322
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYE-----------------E 466
SK+S +SWN + KN +ASSDY+G V +WD + +S+ Y+ E
Sbjct: 323 CTSKISNVSWNPYCKNTLASSDYDGTVQLWDTSLAKSIRRYQINFILIRYKLAGNIAFYE 382
Query: 467 HEKRAWSVDFSRTEPSMLVSGSDDCKV 493
HEKR W+V F+ +P ++ SGSDD +V
Sbjct: 383 HEKRCWTVVFNSVDPHLMASGSDDARV 409
>gi|61417409|gb|AAX46320.1| COP1 regulatory protein [Brassica rapa]
Length = 77
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/77 (89%), Positives = 74/77 (96%)
Query: 355 FTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD 414
FTRYSRLRVIAE+RHGDIFHSANIVSSIEFDRDD+LFATAGVSR IKVFDF+SVVNEPAD
Sbjct: 1 FTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPAD 60
Query: 415 VHCPVVEMPTRSKLSCL 431
+ CP+VEM TRSKLSCL
Sbjct: 61 IQCPIVEMSTRSKLSCL 77
>gi|328688677|gb|AEB35950.1| COP1 [Helianthus annuus]
gi|328688707|gb|AEB35965.1| COP1 [Helianthus annuus]
gi|328688709|gb|AEB35966.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688701|gb|AEB35962.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRVEPSMLVSGSDDCKV 77
>gi|328688409|gb|AEB35816.1| COP1 [Helianthus paradoxus]
gi|328688411|gb|AEB35817.1| COP1 [Helianthus paradoxus]
Length = 96
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVELPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688393|gb|AEB35808.1| COP1 [Helianthus paradoxus]
gi|328688395|gb|AEB35809.1| COP1 [Helianthus paradoxus]
gi|328688397|gb|AEB35810.1| COP1 [Helianthus paradoxus]
gi|328688399|gb|AEB35811.1| COP1 [Helianthus paradoxus]
Length = 95
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVELPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|145345107|ref|XP_001417064.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577290|gb|ABO95357.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 402
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 207/444 (46%), Gaps = 90/444 (20%)
Query: 53 MLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN--------------KSDCPCCGHYLT 97
+ CPIC++ +A A CGH+FC+ C L + CP C T
Sbjct: 22 VTCPICLEPFTDAHCVATCGHTFCHGCASAALDAAAAAPRDGGADAGVSARCPTCSSMFT 81
Query: 98 NNQLYPNFLLDKLLK--KTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKK 155
+ QL PN ++ ++ K+ A + + ++ E+ L++ + L+ LSEK
Sbjct: 82 SAQLVPNAAVNAMVAAMKSGASEAAAASTSAEDGEDDLER--------LTPLVKTLSEKH 133
Query: 156 RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDR 215
R + E + ++L +FL R +K ++ +L + DI+AV R
Sbjct: 134 RSLVLESRAVSREVLKEFLVESRARKQASAVALERELRCLDADIDAVRR----------- 182
Query: 216 YSVKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHG 275
++ LG + DK +I ++ A G + G Q
Sbjct: 183 ---EIEALGGGARVSHERSDLHDKE---VIAHAMEALGLTRPGESQ-------------- 222
Query: 276 HQRKDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTK---QESD 332
+++S +++RV QF++LQ Y KRR T + S
Sbjct: 223 ------------IVIDES-----KRRRVLRQFSELQSWY-SKRRSAERDDVTSDGGKSSG 264
Query: 333 KNIIHREGY---NAGLADFQSVLTTFTRYSRLRVIAELR-HGDIFHSANIVSSIEFDRDD 388
+ GY + + +F +++ TF RYS + + AE+R D + VSSIEFD
Sbjct: 265 SALNGGRGYAPDSTTMEEFSTIIDTFKRYSNISIAAEIRGEEDASNPGAPVSSIEFDSTQ 324
Query: 389 QLFATAGVSRRIKVFDFASVV---NEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSD 445
+ FATAGVS+RI+ ++ V+ +PAD E+ TRSKL+CLS+NKF K+ IA+SD
Sbjct: 325 EYFATAGVSKRIQFYNLEHVLEGSQQPAD------EINTRSKLTCLSYNKFVKHHIAASD 378
Query: 446 YEGIVTVWDVTTQQSVMEYEEHEK 469
YEG+V+VWDV + S++++EEHEK
Sbjct: 379 YEGVVSVWDVEKKCSIIDFEEHEK 402
>gi|328688643|gb|AEB35933.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRVEPSMLVSGSDDCKV 77
>gi|328688651|gb|AEB35937.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRVEPSMLVSGSDDCKV 77
>gi|328688675|gb|AEB35949.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRVEPSMLVSGSDDCKV 77
>gi|328688719|gb|AEB35971.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRXEPSMLVSGSDDCKV 77
>gi|328688445|gb|AEB35834.1| COP1 [Helianthus tuberosus]
Length = 95
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688381|gb|AEB35802.1| COP1 [Helianthus petiolaris]
gi|328688383|gb|AEB35803.1| COP1 [Helianthus petiolaris]
gi|328688419|gb|AEB35821.1| COP1 [Helianthus exilis]
gi|328688421|gb|AEB35822.1| COP1 [Helianthus exilis]
gi|328688439|gb|AEB35831.1| COP1 [Helianthus tuberosus]
gi|328688441|gb|AEB35832.1| COP1 [Helianthus tuberosus]
gi|328688451|gb|AEB35837.1| COP1 [Helianthus tuberosus]
gi|328688453|gb|AEB35838.1| COP1 [Helianthus tuberosus]
gi|328688511|gb|AEB35867.1| COP1 [Helianthus annuus]
gi|328688513|gb|AEB35868.1| COP1 [Helianthus annuus]
gi|328688515|gb|AEB35869.1| COP1 [Helianthus annuus]
gi|328688517|gb|AEB35870.1| COP1 [Helianthus annuus]
gi|328688519|gb|AEB35871.1| COP1 [Helianthus annuus]
gi|328688521|gb|AEB35872.1| COP1 [Helianthus annuus]
gi|328688523|gb|AEB35873.1| COP1 [Helianthus annuus]
gi|328688525|gb|AEB35874.1| COP1 [Helianthus annuus]
gi|328688527|gb|AEB35875.1| COP1 [Helianthus annuus]
gi|328688529|gb|AEB35876.1| COP1 [Helianthus annuus]
gi|328688539|gb|AEB35881.1| COP1 [Helianthus annuus]
gi|328688541|gb|AEB35882.1| COP1 [Helianthus annuus]
gi|328688543|gb|AEB35883.1| COP1 [Helianthus annuus]
gi|328688567|gb|AEB35895.1| COP1 [Helianthus annuus]
gi|328688569|gb|AEB35896.1| COP1 [Helianthus annuus]
gi|328688571|gb|AEB35897.1| COP1 [Helianthus annuus]
gi|328688573|gb|AEB35898.1| COP1 [Helianthus annuus]
gi|328688583|gb|AEB35903.1| COP1 [Helianthus annuus]
gi|328688585|gb|AEB35904.1| COP1 [Helianthus annuus]
gi|328688591|gb|AEB35907.1| COP1 [Helianthus annuus]
gi|328688593|gb|AEB35908.1| COP1 [Helianthus annuus]
gi|328688595|gb|AEB35909.1| COP1 [Helianthus annuus]
gi|328688597|gb|AEB35910.1| COP1 [Helianthus annuus]
gi|328688607|gb|AEB35915.1| COP1 [Helianthus annuus]
gi|328688609|gb|AEB35916.1| COP1 [Helianthus annuus]
gi|328688615|gb|AEB35919.1| COP1 [Helianthus annuus]
gi|328688617|gb|AEB35920.1| COP1 [Helianthus annuus]
gi|328688619|gb|AEB35921.1| COP1 [Helianthus annuus]
gi|328688621|gb|AEB35922.1| COP1 [Helianthus annuus]
gi|328688627|gb|AEB35925.1| COP1 [Helianthus annuus]
gi|328688629|gb|AEB35926.1| COP1 [Helianthus annuus]
gi|328688631|gb|AEB35927.1| COP1 [Helianthus annuus]
gi|328688633|gb|AEB35928.1| COP1 [Helianthus annuus]
gi|328688639|gb|AEB35931.1| COP1 [Helianthus annuus]
gi|328688641|gb|AEB35932.1| COP1 [Helianthus annuus]
gi|328688655|gb|AEB35939.1| COP1 [Helianthus annuus]
gi|328688657|gb|AEB35940.1| COP1 [Helianthus annuus]
gi|328688663|gb|AEB35943.1| COP1 [Helianthus annuus]
gi|328688665|gb|AEB35944.1| COP1 [Helianthus annuus]
gi|328688685|gb|AEB35954.1| COP1 [Helianthus annuus]
gi|328688699|gb|AEB35961.1| COP1 [Helianthus annuus]
gi|328688711|gb|AEB35967.1| COP1 [Helianthus annuus]
gi|328688713|gb|AEB35968.1| COP1 [Helianthus annuus]
Length = 96
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688401|gb|AEB35812.1| COP1 [Helianthus paradoxus]
gi|328688403|gb|AEB35813.1| COP1 [Helianthus paradoxus]
Length = 92
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVELPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688417|gb|AEB35820.1| COP1 [Helianthus exilis]
gi|328688429|gb|AEB35826.1| COP1 [Helianthus exilis]
gi|328688431|gb|AEB35827.1| COP1 [Helianthus exilis]
gi|328688443|gb|AEB35833.1| COP1 [Helianthus tuberosus]
gi|328688545|gb|AEB35884.1| COP1 [Helianthus annuus]
Length = 95
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688467|gb|AEB35845.1| COP1 [Helianthus tuberosus]
Length = 91
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRVEPSMLVSGSDDCKV 77
>gi|328688715|gb|AEB35969.1| COP1 [Helianthus annuus]
Length = 96
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688423|gb|AEB35823.1| COP1 [Helianthus exilis]
Length = 95
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|302843772|ref|XP_002953427.1| hypothetical protein VOLCADRAFT_42633 [Volvox carteri f.
nagariensis]
gi|300261186|gb|EFJ45400.1| hypothetical protein VOLCADRAFT_42633 [Volvox carteri f.
nagariensis]
Length = 353
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 98/143 (68%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L F ++ L +A LR+GD S+++V+ FDRDD+ FA AGVS+RIK+++ +
Sbjct: 1 FAEDLAAFATFTTLTPVASLRYGDPPTSSSMVAGAAFDRDDEFFAVAGVSKRIKIYEREA 60
Query: 408 VVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH 467
V+ H PV+E+ +RS+LS ++W+ + K +AS+DYEG+V +WD T +M++EEH
Sbjct: 61 VLRSHIGAHYPVLEISSRSRLSSVTWSGYIKGHLASADYEGVVQLWDANTNSELMQFEEH 120
Query: 468 EKRAWSVDFSRTEPSMLVSGSDD 490
KR WS+DFS+ +P+ L+SG DD
Sbjct: 121 RKRVWSIDFSQADPARLLSGGDD 143
>gi|328688469|gb|AEB35846.1| COP1 [Helianthus tuberosus]
gi|328688531|gb|AEB35877.1| COP1 [Helianthus annuus]
gi|328688533|gb|AEB35878.1| COP1 [Helianthus annuus]
gi|328688601|gb|AEB35912.1| COP1 [Helianthus annuus]
Length = 91
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688503|gb|AEB35863.1| COP1 [Helianthus annuus]
gi|328688505|gb|AEB35864.1| COP1 [Helianthus annuus]
gi|328688599|gb|AEB35911.1| COP1 [Helianthus annuus]
Length = 92
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688667|gb|AEB35945.1| COP1 [Helianthus annuus]
gi|328688669|gb|AEB35946.1| COP1 [Helianthus annuus]
Length = 88
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688459|gb|AEB35841.1| COP1 [Helianthus tuberosus]
Length = 82
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|167525172|ref|XP_001746921.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774701|gb|EDQ88328.1| predicted protein [Monosiga brevicollis MX1]
Length = 499
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 20/197 (10%)
Query: 300 KKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYS 359
+ R++ F+DLQE YL+ H DK RE + F + +++
Sbjct: 121 QARLYKHFDDLQEAYLE---------HHAVADDK----REAFRR----FADDVRNMDQFA 163
Query: 360 RLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVN---EPADVH 416
RL + LR+GD++++ +IVSSIE D ++ FATAGVS++I+V+D+ +V++ + A++H
Sbjct: 164 RLESVCRLRYGDLYNNNSIVSSIELDPEENRFATAGVSKQIRVYDYNTVLSRGRQGAEIH 223
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
P++ M SK+SCL+WN +++ASSD G V VWDV + ++EHE+R WSVD
Sbjct: 224 LPILTMDCPSKISCLAWNPVQGHQLASSDNHGSVRVWDVNAGTPITVFQEHERRVWSVDV 283
Query: 477 SRTEPSMLVSGSDDCKV 493
+R P +L SGSDD +V
Sbjct: 284 NRQNPVLLASGSDDRQV 300
>gi|328688671|gb|AEB35947.1| COP1 [Helianthus annuus]
gi|328688673|gb|AEB35948.1| COP1 [Helianthus annuus]
Length = 85
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688385|gb|AEB35804.1| COP1 [Helianthus petiolaris]
Length = 95
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQ+SVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQKSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688461|gb|AEB35842.1| COP1 [Helianthus tuberosus]
Length = 96
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 69/77 (89%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EP MLVSGSDDCKV
Sbjct: 61 SRIEPPMLVSGSDDCKV 77
>gi|328688387|gb|AEB35805.1| COP1 [Helianthus petiolaris]
Length = 95
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 70/77 (90%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQ+SVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQKSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRLEPSMLVSGSDDCKV 77
>gi|328688191|gb|AEB35707.1| COP1 [Lactuca sativa]
gi|328688193|gb|AEB35708.1| COP1 [Lactuca sativa]
gi|328688195|gb|AEB35709.1| COP1 [Lactuca sativa]
gi|328688197|gb|AEB35710.1| COP1 [Lactuca sativa]
gi|328688199|gb|AEB35711.1| COP1 [Lactuca sativa]
gi|328688201|gb|AEB35712.1| COP1 [Lactuca sativa]
gi|328688203|gb|AEB35713.1| COP1 [Lactuca sativa]
gi|328688205|gb|AEB35714.1| COP1 [Lactuca sativa]
gi|328688207|gb|AEB35715.1| COP1 [Lactuca sativa]
gi|328688209|gb|AEB35716.1| COP1 [Lactuca sativa]
gi|328688211|gb|AEB35717.1| COP1 [Lactuca sativa]
gi|328688213|gb|AEB35718.1| COP1 [Lactuca sativa]
gi|328688215|gb|AEB35719.1| COP1 [Lactuca sativa]
gi|328688217|gb|AEB35720.1| COP1 [Lactuca sativa]
gi|328688219|gb|AEB35721.1| COP1 [Lactuca sativa]
gi|328688221|gb|AEB35722.1| COP1 [Lactuca sativa]
gi|328688223|gb|AEB35723.1| COP1 [Lactuca sativa]
gi|328688225|gb|AEB35724.1| COP1 [Lactuca sativa]
gi|328688227|gb|AEB35725.1| COP1 [Lactuca sativa]
gi|328688229|gb|AEB35726.1| COP1 [Lactuca sativa]
gi|328688231|gb|AEB35727.1| COP1 [Lactuca sativa]
gi|328688233|gb|AEB35728.1| COP1 [Lactuca sativa]
gi|328688235|gb|AEB35729.1| COP1 [Lactuca sativa]
gi|328688237|gb|AEB35730.1| COP1 [Lactuca sativa]
gi|328688239|gb|AEB35731.1| COP1 [Lactuca sativa]
gi|328688241|gb|AEB35732.1| COP1 [Lactuca sativa]
gi|328688243|gb|AEB35733.1| COP1 [Lactuca sativa]
gi|328688245|gb|AEB35734.1| COP1 [Lactuca sativa]
gi|328688247|gb|AEB35735.1| COP1 [Lactuca sativa]
gi|328688249|gb|AEB35736.1| COP1 [Lactuca sativa]
gi|328688251|gb|AEB35737.1| COP1 [Lactuca sativa]
gi|328688253|gb|AEB35738.1| COP1 [Lactuca sativa]
gi|328688255|gb|AEB35739.1| COP1 [Lactuca sativa]
gi|328688257|gb|AEB35740.1| COP1 [Lactuca serriola]
gi|328688259|gb|AEB35741.1| COP1 [Lactuca serriola]
gi|328688261|gb|AEB35742.1| COP1 [Lactuca serriola]
gi|328688263|gb|AEB35743.1| COP1 [Lactuca serriola]
gi|328688265|gb|AEB35744.1| COP1 [Lactuca serriola]
gi|328688267|gb|AEB35745.1| COP1 [Lactuca serriola]
gi|328688269|gb|AEB35746.1| COP1 [Lactuca serriola]
gi|328688271|gb|AEB35747.1| COP1 [Lactuca serriola]
gi|328688273|gb|AEB35748.1| COP1 [Lactuca serriola]
gi|328688275|gb|AEB35749.1| COP1 [Lactuca serriola]
gi|328688277|gb|AEB35750.1| COP1 [Lactuca serriola]
gi|328688279|gb|AEB35751.1| COP1 [Lactuca serriola]
gi|328688281|gb|AEB35752.1| COP1 [Lactuca serriola]
gi|328688283|gb|AEB35753.1| COP1 [Lactuca serriola]
gi|328688285|gb|AEB35754.1| COP1 [Lactuca serriola]
gi|328688287|gb|AEB35755.1| COP1 [Lactuca serriola]
gi|328688289|gb|AEB35756.1| COP1 [Lactuca serriola]
gi|328688291|gb|AEB35757.1| COP1 [Lactuca serriola]
gi|328688293|gb|AEB35758.1| COP1 [Lactuca saligna]
gi|328688295|gb|AEB35759.1| COP1 [Lactuca saligna]
gi|328688297|gb|AEB35760.1| COP1 [Lactuca saligna]
gi|328688299|gb|AEB35761.1| COP1 [Lactuca saligna]
gi|328688301|gb|AEB35762.1| COP1 [Lactuca saligna]
gi|328688303|gb|AEB35763.1| COP1 [Lactuca saligna]
gi|328688305|gb|AEB35764.1| COP1 [Lactuca saligna]
gi|328688307|gb|AEB35765.1| COP1 [Lactuca saligna]
gi|328688309|gb|AEB35766.1| COP1 [Lactuca saligna]
gi|328688311|gb|AEB35767.1| COP1 [Lactuca saligna]
gi|328688313|gb|AEB35768.1| COP1 [Lactuca saligna]
gi|328688315|gb|AEB35769.1| COP1 [Lactuca saligna]
gi|328688317|gb|AEB35770.1| COP1 [Lactuca saligna]
gi|328688319|gb|AEB35771.1| COP1 [Lactuca saligna]
gi|328688321|gb|AEB35772.1| COP1 [Lactuca saligna]
gi|328688323|gb|AEB35773.1| COP1 [Lactuca saligna]
gi|328688325|gb|AEB35774.1| COP1 [Lactuca saligna]
gi|328688327|gb|AEB35775.1| COP1 [Lactuca saligna]
gi|328688329|gb|AEB35776.1| COP1 [Lactuca saligna]
gi|328688331|gb|AEB35777.1| COP1 [Lactuca saligna]
gi|328688333|gb|AEB35778.1| COP1 [Lactuca saligna]
gi|328688335|gb|AEB35779.1| COP1 [Lactuca saligna]
gi|328688337|gb|AEB35780.1| COP1 [Lactuca saligna]
gi|328688339|gb|AEB35781.1| COP1 [Lactuca saligna]
gi|328688341|gb|AEB35782.1| COP1 [Lactuca saligna]
gi|328688343|gb|AEB35783.1| COP1 [Lactuca saligna]
gi|328688345|gb|AEB35784.1| COP1 [Lactuca saligna]
gi|328688347|gb|AEB35785.1| COP1 [Lactuca virosa]
gi|328688349|gb|AEB35786.1| COP1 [Lactuca virosa]
gi|328688351|gb|AEB35787.1| COP1 [Lactuca virosa]
gi|328688353|gb|AEB35788.1| COP1 [Lactuca virosa]
gi|328688355|gb|AEB35789.1| COP1 [Lactuca virosa]
gi|328688357|gb|AEB35790.1| COP1 [Lactuca virosa]
gi|328688359|gb|AEB35791.1| COP1 [Lactuca virosa]
gi|328688361|gb|AEB35792.1| COP1 [Lactuca virosa]
gi|328688363|gb|AEB35793.1| COP1 [Lactuca virosa]
gi|328688365|gb|AEB35794.1| COP1 [Lactuca virosa]
gi|328688367|gb|AEB35795.1| COP1 [Lactuca virosa]
gi|328688369|gb|AEB35796.1| COP1 [Lactuca virosa]
gi|328688371|gb|AEB35797.1| COP1 [Lactuca sativa]
Length = 90
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/77 (85%), Positives = 71/77 (92%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVEMPTRSKLSCLSWNK +KN IASSDYEGIVT+WDV T+QSVMEYEEHEKR WSVDF
Sbjct: 1 CPVVEMPTRSKLSCLSWNKHTKNHIASSDYEGIVTIWDVNTRQSVMEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
S+ + SMLVSGSDDCKV
Sbjct: 61 SKMDSSMLVSGSDDCKV 77
>gi|328688425|gb|AEB35824.1| COP1 [Helianthus exilis]
gi|328688427|gb|AEB35825.1| COP1 [Helianthus exilis]
Length = 96
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 69/77 (89%)
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDF 476
CPVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSV EYEEHEKR WSVDF
Sbjct: 1 CPVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVTEYEEHEKRVWSVDF 60
Query: 477 SRTEPSMLVSGSDDCKV 493
SR EPSMLVSGSDDCKV
Sbjct: 61 SRIEPSMLVSGSDDCKV 77
>gi|328688653|gb|AEB35938.1| COP1 [Helianthus annuus]
Length = 91
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 69/76 (90%)
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
PVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFS
Sbjct: 2 PVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFS 61
Query: 478 RTEPSMLVSGSDDCKV 493
R EPSMLVSGSDDCKV
Sbjct: 62 RIEPSMLVSGSDDCKV 77
>gi|328688717|gb|AEB35970.1| COP1 [Helianthus annuus]
Length = 83
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 69/76 (90%)
Query: 418 PVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFS 477
PVVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFS
Sbjct: 1 PVVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFS 60
Query: 478 RTEPSMLVSGSDDCKV 493
R EPSMLVSGSDDCKV
Sbjct: 61 RIEPSMLVSGSDDCKV 76
>gi|255070521|ref|XP_002507342.1| E3 ubiquitin-protein ligase COP1 [Micromonas sp. RCC299]
gi|226522617|gb|ACO68600.1| E3 ubiquitin-protein ligase COP1 [Micromonas sp. RCC299]
Length = 827
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 120/210 (57%), Gaps = 20/210 (9%)
Query: 295 LSVVRKKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGY--NAG------LA 346
+S + K+V F++LQ+ Y R + + N++ R +AG L
Sbjct: 373 VSGAKIKKVFTHFSNLQQIYSDVR---------CGDDNNNVVLRGSRVKDAGSIAVPSLD 423
Query: 347 DFQSVLTTFTRYSRLRVIAELRH---GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
F ++T + RL V+ +++H + S I+SSIE D +D FATAGVSR I F
Sbjct: 424 HFARLITDSSSCDRLAVVGQVQHIGSSNTSASNPIISSIEIDMEDFCFATAGVSRLIHFF 483
Query: 404 DFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVME 463
FA V N P + T SKLSCLS++K + IASSDYEG+++VWD+ +++E
Sbjct: 484 RFADVCNGYEHSGLPAQSISTSSKLSCLSYSKHVQKHIASSDYEGVISVWDIEIGSALVE 543
Query: 464 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
YEEH KRAW+VDF RT+P +L SGSDD +V
Sbjct: 544 YEEHGKRAWTVDFCRTDPRLLASGSDDGRV 573
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
SE D +CPIC +I AF + CGH+FC+ CI + + CPCC H L+ + L+PN
Sbjct: 3 SERTDDHVCPICREIYVNAFSSICGHTFCFECIRARIAHIQTCPCCSHPLSRDTLFPNLA 62
Query: 107 LDKLLKKTS----ARQISKTASP--LENFRQALQQG-------CGVSVKEIDSLMSLLSE 153
LD+LLK S R K P + R + Q G+ + + L+ ++
Sbjct: 63 LDRLLKGLSLASQPRDSLKKNKPCSVRGERDIMIQSQRIADAVTGLPLGCVPGLLHSVAG 122
Query: 154 KKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDL 209
K R + ++ N+ +L DFL K+K+ + ++ ++ I+ED+ V++ ++L
Sbjct: 123 KHRDLIMDDEHSNIGLLRDFLLFSFKRKMRCTEHLEREISSIEEDVAWVDKQHMEL 178
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
Query: 348 FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFAS 407
F L +S+L + A LR GD+ + FDRDD+ FAT GVSRR+K+FDFA+
Sbjct: 625 FARDLNELAAHSKLSLKATLRSGDLASPVEMACCAAFDRDDEFFATVGVSRRVKIFDFAA 684
Query: 408 VV-NEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEE 466
+ + + +H P +++ TRSKLS +SWN + K+++ +SDY G++ +WD T +Y+E
Sbjct: 685 CLEGQDSVMHYPALQITTRSKLSSVSWNSYVKSQLITSDYGGLIQLWDAATAGEAAQYDE 744
Query: 467 HEKRAWSVDFSRTEPSMLVSGSDDCKV 493
H +R WSVDFS T+P +SGSDD V
Sbjct: 745 HARRVWSVDFSTTDPMRFLSGSDDGSV 771
>gi|328688695|gb|AEB35959.1| COP1 [Helianthus annuus]
gi|328688697|gb|AEB35960.1| COP1 [Helianthus annuus]
Length = 94
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688447|gb|AEB35835.1| COP1 [Helianthus tuberosus]
gi|328688455|gb|AEB35839.1| COP1 [Helianthus tuberosus]
gi|328688457|gb|AEB35840.1| COP1 [Helianthus tuberosus]
gi|328688477|gb|AEB35850.1| COP1 [Helianthus argophyllus]
gi|328688479|gb|AEB35851.1| COP1 [Helianthus argophyllus]
gi|328688481|gb|AEB35852.1| COP1 [Helianthus argophyllus]
gi|328688483|gb|AEB35853.1| COP1 [Helianthus argophyllus]
gi|328688485|gb|AEB35854.1| COP1 [Helianthus argophyllus]
gi|328688487|gb|AEB35855.1| COP1 [Helianthus argophyllus]
gi|328688489|gb|AEB35856.1| COP1 [Helianthus argophyllus]
gi|328688491|gb|AEB35857.1| COP1 [Helianthus argophyllus]
gi|328688493|gb|AEB35858.1| COP1 [Helianthus argophyllus]
gi|328688579|gb|AEB35901.1| COP1 [Helianthus annuus]
gi|328688581|gb|AEB35902.1| COP1 [Helianthus annuus]
gi|328688587|gb|AEB35905.1| COP1 [Helianthus annuus]
gi|328688589|gb|AEB35906.1| COP1 [Helianthus annuus]
gi|328688623|gb|AEB35923.1| COP1 [Helianthus annuus]
gi|328688625|gb|AEB35924.1| COP1 [Helianthus annuus]
Length = 93
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688563|gb|AEB35893.1| COP1 [Helianthus annuus]
gi|328688565|gb|AEB35894.1| COP1 [Helianthus annuus]
Length = 90
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688645|gb|AEB35934.1| COP1 [Helianthus annuus]
Length = 90
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688647|gb|AEB35935.1| COP1 [Helianthus annuus]
gi|328688649|gb|AEB35936.1| COP1 [Helianthus annuus]
Length = 90
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688475|gb|AEB35849.1| COP1 [Helianthus argophyllus]
Length = 93
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688611|gb|AEB35917.1| COP1 [Helianthus annuus]
gi|328688613|gb|AEB35918.1| COP1 [Helianthus annuus]
Length = 88
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688449|gb|AEB35836.1| COP1 [Helianthus tuberosus]
Length = 93
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 68/75 (90%)
Query: 419 VVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSR 478
VVE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQ+VMEYEEHEKR WSVDFSR
Sbjct: 1 VVEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQNVMEYEEHEKRVWSVDFSR 60
Query: 479 TEPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 IEPSMLVSGSDDCKV 75
>gi|328688603|gb|AEB35913.1| COP1 [Helianthus annuus]
gi|328688605|gb|AEB35914.1| COP1 [Helianthus annuus]
Length = 93
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 67/74 (90%)
Query: 420 VEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRT 479
VE+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR
Sbjct: 1 VEIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRI 60
Query: 480 EPSMLVSGSDDCKV 493
EPSMLVSGSDDCKV
Sbjct: 61 EPSMLVSGSDDCKV 74
>gi|390363653|ref|XP_001192151.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial
[Strongylocentrotus purpuratus]
Length = 290
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 82/113 (72%)
Query: 381 SIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNR 440
SIEFD+D+ FA AGV+++IKVF++ +V+ + D+H PV EM SK+SC++W+ + K
Sbjct: 29 SIEFDKDNDFFAIAGVTKKIKVFEYGTVIMDAVDIHYPVHEMACNSKISCVAWSAYHKGV 88
Query: 441 IASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ASSDYEG VT+WD ++EHEKR WS+DF+R +P +L SGSDD KV
Sbjct: 89 LASSDYEGTVTLWDAFAGVKTQSFQEHEKRCWSIDFNRMDPKLLASGSDDAKV 141
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
Query: 309 DLQECYLQKRRQMANQPHTKQESDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELR 368
D Q ++KRRQ A S L F L+ TR + LR IA++
Sbjct: 996 DAQRALVEKRRQGAIAETAAAASQA-------LGQALHAFGQDLSQATRKTTLRTIADVS 1048
Query: 369 HGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKL 428
GD+ ++ +DRD + ATAG+S+R+++F+ ++N A VHCPV EM +KL
Sbjct: 1049 LGDVHSFGEMICCTGWDRDAEYIATAGISKRLRIFEVDPLINSGAAVHCPVAEMKASAKL 1108
Query: 429 SCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGS 488
S ++WN + K+ +A++DYEG+V++WDV + + EH+KR WS +S+ +P+ LVSGS
Sbjct: 1109 SSMTWNPYIKHTVATADYEGVVSLWDVNRGEVGSAFHEHKKRVWSTSWSKLDPTRLVSGS 1168
Query: 489 DD--CKV 493
DD C+V
Sbjct: 1169 DDGTCRV 1175
>gi|221119584|ref|XP_002164501.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial [Hydra
magnipapillata]
Length = 301
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 82/112 (73%)
Query: 382 IEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRI 441
IEFDRD FA AGV+++IKVF++ ++ + D+H PV EM SK+SC+SW+++ K +
Sbjct: 1 IEFDRDCDYFAIAGVTKKIKVFEYGQILRDVVDIHYPVHEMTCNSKISCISWSQYHKGML 60
Query: 442 ASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
ASSDYEGIVT+WD T ++EHEKR WSVDF+ +P+++ SGSDD KV
Sbjct: 61 ASSDYEGIVTIWDAFTGTQTQVFQEHEKRCWSVDFNIVDPNLIASGSDDAKV 112
>gi|328688413|gb|AEB35818.1| COP1 [Helianthus paradoxus]
gi|328688415|gb|AEB35819.1| COP1 [Helianthus paradoxus]
Length = 87
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 66/73 (90%)
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
E+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR E
Sbjct: 1 ELPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIE 60
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 61 PSMLVSGSDDCKV 73
>gi|328688437|gb|AEB35830.1| COP1 [Helianthus tuberosus]
Length = 91
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 66/73 (90%)
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
E+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR E
Sbjct: 1 EIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIE 60
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 61 PSMLVSGSDDCKV 73
>gi|328688659|gb|AEB35941.1| COP1 [Helianthus annuus]
gi|328688661|gb|AEB35942.1| COP1 [Helianthus annuus]
Length = 87
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 66/73 (90%)
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
E+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR E
Sbjct: 1 EIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIE 60
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 61 PSMLVSGSDDCKV 73
>gi|350589033|ref|XP_003130377.3| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Sus scrofa]
Length = 445
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 66/345 (19%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 132 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 191
Query: 111 LKKTSAR------QISKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKM 158
+ K R ++ + S R Q Q G + + ++ ++ LL +KK+++
Sbjct: 192 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 251
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSV 218
E E +QIL++FL R+ K ++L++IQ +L ++EDI VE LY
Sbjct: 252 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP------ 304
Query: 219 KLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQR 278
+ +DS + + + S II S+ + +GS Q KK
Sbjct: 305 ----VSEDSTVPQ--FEAPSPSHSSIIDSTEYIQPPGFSGSSQTKK-------------- 344
Query: 279 KDSLTGSDSQCLNQSGLSVVRKKRVHAQFNDLQECYLQKR-RQMANQPHTKQESDKNIIH 337
Q S L+ R+KR+ A F DL++CY R ++++ T + D
Sbjct: 345 ---------QPWYNSTLA-SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLD----- 389
Query: 338 REGYNAGLADFQSVLTTFTRYSRLRVIAELRHG-DIFHSANIVSS 381
+FQ L+ FTRY+ +R +A L + D+++ ++IVSS
Sbjct: 390 ---------EFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSS 425
>gi|402590836|gb|EJW84766.1| hypothetical protein WUBG_04318 [Wuchereria bancrofti]
Length = 432
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 99/155 (63%), Gaps = 6/155 (3%)
Query: 345 LADFQSVLTTFTRYSRLRVIAELRH--GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKV 402
L DF VL ++Y R +A L + D + +IVSSIEFD+D + F AGV++RIKV
Sbjct: 89 LDDFSQVLHGMSQYGSFRRLASLNYNVADATAALSIVSSIEFDKDGEFFILAGVAKRIKV 148
Query: 403 FDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV- 461
++F SV+ +H PV ++ SK+S +SWN + KN +ASSDY+G V +WD + +S+
Sbjct: 149 YEFQSVIENTDTLHYPVTQLQCTSKISNVSWNPYCKNTLASSDYDGTVQLWDTSLARSIR 208
Query: 462 ---MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ + EHEKR W+V F+ +P ++ SGSDD +V
Sbjct: 209 PGNIAFYEHEKRCWTVVFNSVDPHLMASGSDDARV 243
>gi|328688389|gb|AEB35806.1| COP1 [Helianthus petiolaris]
gi|328688391|gb|AEB35807.1| COP1 [Helianthus petiolaris]
Length = 87
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 66/73 (90%)
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
E+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQ+SVMEYEEHEKR WSVDFSR E
Sbjct: 1 EIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQKSVMEYEEHEKRVWSVDFSRIE 60
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 61 PSMLVSGSDDCKV 73
>gi|328688683|gb|AEB35953.1| COP1 [Helianthus annuus]
Length = 91
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/72 (87%), Positives = 65/72 (90%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EP
Sbjct: 1 IPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEP 60
Query: 482 SMLVSGSDDCKV 493
SMLVSGSDDCKV
Sbjct: 61 SMLVSGSDDCKV 72
>gi|328688373|gb|AEB35798.1| COP1 [Helianthus petiolaris]
gi|328688375|gb|AEB35799.1| COP1 [Helianthus petiolaris]
gi|328688377|gb|AEB35800.1| COP1 [Helianthus petiolaris]
gi|328688379|gb|AEB35801.1| COP1 [Helianthus petiolaris]
Length = 90
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 66/73 (90%)
Query: 421 EMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTE 480
E+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQ+SVMEYEEHEKR WSVDFSR E
Sbjct: 1 EIPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQKSVMEYEEHEKRVWSVDFSRIE 60
Query: 481 PSMLVSGSDDCKV 493
PSMLVSGSDDCKV
Sbjct: 61 PSMLVSGSDDCKV 73
>gi|328688555|gb|AEB35889.1| COP1 [Helianthus annuus]
gi|328688557|gb|AEB35890.1| COP1 [Helianthus annuus]
Length = 83
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/72 (87%), Positives = 65/72 (90%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EP
Sbjct: 1 IPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEP 60
Query: 482 SMLVSGSDDCKV 493
SMLVSGSDDCKV
Sbjct: 61 SMLVSGSDDCKV 72
>gi|328688471|gb|AEB35847.1| COP1 [Helianthus argophyllus]
gi|328688473|gb|AEB35848.1| COP1 [Helianthus argophyllus]
Length = 86
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/72 (87%), Positives = 65/72 (90%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
+PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EP
Sbjct: 1 IPTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEP 60
Query: 482 SMLVSGSDDCKV 493
SMLVSGSDDCKV
Sbjct: 61 SMLVSGSDDCKV 72
>gi|328688497|gb|AEB35860.1| COP1 [Helianthus annuus]
Length = 85
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688433|gb|AEB35828.1| COP1 [Helianthus exilis]
gi|328688435|gb|AEB35829.1| COP1 [Helianthus exilis]
Length = 90
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688535|gb|AEB35879.1| COP1 [Helianthus annuus]
gi|328688537|gb|AEB35880.1| COP1 [Helianthus annuus]
Length = 87
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688495|gb|AEB35859.1| COP1 [Helianthus annuus]
gi|328688507|gb|AEB35865.1| COP1 [Helianthus annuus]
gi|328688509|gb|AEB35866.1| COP1 [Helianthus annuus]
gi|328688559|gb|AEB35891.1| COP1 [Helianthus annuus]
gi|328688561|gb|AEB35892.1| COP1 [Helianthus annuus]
gi|328688679|gb|AEB35951.1| COP1 [Helianthus annuus]
gi|328688681|gb|AEB35952.1| COP1 [Helianthus annuus]
Length = 85
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688575|gb|AEB35899.1| COP1 [Helianthus annuus]
gi|328688577|gb|AEB35900.1| COP1 [Helianthus annuus]
gi|328688703|gb|AEB35963.1| COP1 [Helianthus annuus]
gi|328688705|gb|AEB35964.1| COP1 [Helianthus annuus]
Length = 84
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688499|gb|AEB35861.1| COP1 [Helianthus annuus]
gi|328688501|gb|AEB35862.1| COP1 [Helianthus annuus]
Length = 86
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688463|gb|AEB35843.1| COP1 [Helianthus tuberosus]
gi|328688465|gb|AEB35844.1| COP1 [Helianthus tuberosus]
Length = 84
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|328688547|gb|AEB35885.1| COP1 [Helianthus annuus]
gi|328688549|gb|AEB35886.1| COP1 [Helianthus annuus]
gi|328688551|gb|AEB35887.1| COP1 [Helianthus annuus]
gi|328688553|gb|AEB35888.1| COP1 [Helianthus annuus]
Length = 82
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 64/71 (90%)
Query: 423 PTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPS 482
PTRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPS
Sbjct: 1 PTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPS 60
Query: 483 MLVSGSDDCKV 493
MLVSGSDDCKV
Sbjct: 61 MLVSGSDDCKV 71
>gi|350589031|ref|XP_003482771.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Sus scrofa]
Length = 118
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFS 437
++S IEFDRD FA AGV+++IKV+++ +V+ + D+H P EM SK+SC+SW+ +
Sbjct: 1 MLSVIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYH 60
Query: 438 KNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 492
KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD K
Sbjct: 61 KNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAK 115
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Query: 343 AGLAD-FQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIK 401
AG D F + L R + L V+A++ G + +V S +DRD + AT G+S+R++
Sbjct: 943 AGAMDGFGADLARCVRRTTLNVVADVSIGHVHSFGEMVCSTGWDRDGEYIATGGISKRLR 1002
Query: 402 VFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSV 461
VF+ A V A VHCPV E+ T SKLS L+WN + K+ +AS+DY+G V +WD
Sbjct: 1003 VFEVAVVTELGAAVHCPVSEIKTNSKLSSLAWNPYIKHGLASADYDGSVHLWDADRGVLT 1062
Query: 462 MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
E+ EH KRAWS+D+S+ +P+ LVSGSDD V
Sbjct: 1063 SEFNEHRKRAWSLDYSQLDPTRLVSGSDDGTV 1094
>gi|328688405|gb|AEB35814.1| COP1 [Helianthus paradoxus]
gi|328688407|gb|AEB35815.1| COP1 [Helianthus paradoxus]
Length = 87
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/72 (86%), Positives = 64/72 (88%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
+ TRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EP
Sbjct: 1 LLTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEP 60
Query: 482 SMLVSGSDDCKV 493
SMLVSGSDDCKV
Sbjct: 61 SMLVSGSDDCKV 72
>gi|328688687|gb|AEB35955.1| COP1 [Helianthus annuus]
gi|328688689|gb|AEB35956.1| COP1 [Helianthus annuus]
Length = 83
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 63/70 (90%)
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
TRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPSM
Sbjct: 1 TRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPSM 60
Query: 484 LVSGSDDCKV 493
LVSGSDDCKV
Sbjct: 61 LVSGSDDCKV 70
>gi|328688635|gb|AEB35929.1| COP1 [Helianthus annuus]
gi|328688637|gb|AEB35930.1| COP1 [Helianthus annuus]
gi|328688691|gb|AEB35957.1| COP1 [Helianthus annuus]
gi|328688693|gb|AEB35958.1| COP1 [Helianthus annuus]
Length = 84
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 63/70 (90%)
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
TRSKLSCLSWNK +KN IASSDYEG V VWDV TQQSVMEYEEHEKR WSVDFSR EPSM
Sbjct: 1 TRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTQQSVMEYEEHEKRVWSVDFSRIEPSM 60
Query: 484 LVSGSDDCKV 493
LVSGSDDCKV
Sbjct: 61 LVSGSDDCKV 70
>gi|384487947|gb|EIE80127.1| hypothetical protein RO3G_04832 [Rhizopus delemar RA 99-880]
Length = 397
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 374 HSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD-----VHCPVVEMPTRSKL 428
+ +IVSSIEFDRD++ FA G+ + IK++DF + N +D +HCP+ + +K+
Sbjct: 95 QNTSIVSSIEFDRDEEYFAVGGILKDIKIYDF-RLTNRSSDDNQYAMHCPIRRISCENKI 153
Query: 429 SCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGS 488
SCLSW+ + K+++AS+DY+G++ VWDVTT Q + + EH KRAWSVD S P++L SGS
Sbjct: 154 SCLSWSSYIKSQLASADYQGVINVWDVTTGQKMSSFVEHRKRAWSVDTSPRNPNLLASGS 213
Query: 489 DDCKV 493
DD V
Sbjct: 214 DDTTV 218
>gi|443712181|gb|ELU05603.1| hypothetical protein CAPTEDRAFT_195766, partial [Capitella teleta]
Length = 322
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Query: 314 YLQKRRQMANQPHTKQESDKNIIHREGYNAG--LADFQSVLTTFTRYSRLRVIAELRHG- 370
+ R+ +A H + ++N + YNA L +F L+ F R++ R +A L +
Sbjct: 170 FTSGRQAVAANDHGITKEEENF--KPSYNASDTLDEFTESLSKFVRFTSFRTLASLNYAS 227
Query: 371 DIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSC 430
DI+ +++IVSSIEFDRD FA AGV+++IKVF++ +V+ + ++H PV EM SK+S
Sbjct: 228 DIYLTSSIVSSIEFDRDADYFAIAGVTKKIKVFEYGTVIKDQVNIHYPVKEMVCNSKISS 287
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT 457
++W+ + K+ +ASSDYEG VT+WD T
Sbjct: 288 ITWSSYHKSLLASSDYEGTVTLWDAFT 314
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 91 CCGHYLTNNQLYPNFLLDKLLKKTSA-RQISK---TASPLENFRQALQQGCGVSVKEIDS 146
CC L N L+ K +KT+ ++I K T S +E + G+ + ++
Sbjct: 7 CCIRILNEK---VNELISKQKQKTAEHKKIKKENSTGSNIETTLLDIIDQDGLDLPGLNL 63
Query: 147 LMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKE-------IQTDLHYIKEDI 199
++ +L +KK ++EQ+ +Q+L DFL +R +K ++L + I +DLH + + I
Sbjct: 64 MLDVLDKKKNQLEQDCHVAQLQVLKDFLSQVRLKKQEQLDQLTRELALINSDLHRVNDKI 123
Query: 200 NAVERH 205
+RH
Sbjct: 124 GEQKRH 129
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 340 GYNA--GLADFQSVLTTFTRYSRLRVIAELRHGDI--FHSAN-IVSSIEFDRDDQLFATA 394
GY+ L DF+S + TR L+ A + GD+ F + N +V +DRD +LFATA
Sbjct: 527 GYSVCNALDDFESEIRLVTRSVSLKRCASI-GGDVTDFVANNSMVCCASWDRDGELFATA 585
Query: 395 GVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWD 454
G SR I V++ +V+ A VHCP VE K+S L +N + K IAS DY+G+V +WD
Sbjct: 586 GTSRSICVYEADAVMKLGARVHCPAVEFEANDKVSSLCFNHYVKQSIASGDYQGVVQLWD 645
Query: 455 VTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
V + S E H +R WS+DFS +P+ L SGSDD V
Sbjct: 646 VHKEVSTWENNTHRRRVWSLDFSSIDPTKLASGSDDGTV 684
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 334 NIIHREGYNAGLAD----FQSVLTTFTRYSRLRVIAELRHGDIFH-SANIVSSIEFDRDD 388
N+I R L D F S LT TR R RV+A L GD+ S+++V S ++RD
Sbjct: 828 NMIKRTNVEEQLTDDLKEFGSCLTRVTRKWRFRVVARLGCGDLVGGSSDMVCSTAWNRDG 887
Query: 389 QLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEG 448
LFATAG+S+R+ +++ ASV+ VHCP +E+ T SKLS +S+N + K +AS+ Y+G
Sbjct: 888 DLFATAGISKRLCIYEVASVMQLGNAVHCPAIELSTSSKLSSISFNPYVKPVMASATYDG 947
Query: 449 IVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ +WDV M + H KR WS +FS +P+ L+S SDD
Sbjct: 948 AMQIWDVQKGMETMRLKNHTKRVWSTEFSPIDPTRLLSASDD 989
>gi|340374691|ref|XP_003385871.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Amphimedon
queenslandica]
Length = 616
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 103/164 (62%), Gaps = 7/164 (4%)
Query: 331 SDKNIIHREGYNAGLADFQSVLTTFTRYSRLRVIAELRHGD-IFHSANIVSSIEFDRDDQ 389
+D ++ EG A F+ L+ T+YS + +A L + D S++IVSSIEFD+D
Sbjct: 264 TDSTVMRSEGSTA----FRETLSAVTQYSSFKELATLTYADGPIGSSSIVSSIEFDKDGD 319
Query: 390 LFATAGVSRRIKVFDFASVVNEP--ADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYE 447
FA GV++++K+FD+ +V +H PV E+P +K+S ++++ + K ++A+SDY+
Sbjct: 320 FFAVGGVTKKVKIFDYNTVTEARMFPTIHYPVREIPCHAKISSVAYSPYIKPQLATSDYD 379
Query: 448 GIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDC 491
G +++WD + Y+EHEKR WSV +++ + S+L +G DDC
Sbjct: 380 GTLSIWDCHQMKCTRNYQEHEKRVWSVSYNQYDTSLLATGGDDC 423
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 43 EVGVSELDK-DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQL 101
+VG +L K D++CP+C I +T CGHSFC+ CI + CP CG L+ +
Sbjct: 12 QVGEEKLSKSDVICPVCFDIFTSVQVTVCGHSFCHECIHKSIAQTQQCPICGTKLSRDSG 71
Query: 102 Y-PNFLLDKLLKKTSARQISKTASPLEN--FRQALQQGCGVSVKEIDSLMSLLSEKKRKM 158
+ PNF L+ ++ K +++ AS + + LQ + + +L +S +
Sbjct: 72 FAPNFSLNDIVAKIRSQETHHDASLSYDAYYGNVLQMVKNLKPNHLIALNEQISSQIDLN 131
Query: 159 EQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHR 206
++EE + + +FL +K K EL+ + T+L + EDI + R +
Sbjct: 132 KKEENKVEDSVFNEFLIESKKAKEMELERVTTELSTLSEDIQVLSRTK 179
>gi|145351732|ref|XP_001420221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580454|gb|ABO98514.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%)
Query: 377 NIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKF 436
++V +DRD +LFATAG S+ I V++ ++V+ A VHCP VE SK+S L +N +
Sbjct: 2 SMVCCASWDRDGELFATAGTSKSICVYETSAVMTLGARVHCPAVEFEAHSKVSALCYNPY 61
Query: 437 SKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
K IAS DY+G+V +WDV + S E H +R WS+DFS +P+ L S SDD V
Sbjct: 62 VKQSIASGDYQGVVQLWDVQKETSTWENTTHRRRVWSIDFSHIDPTKLASASDDGTV 118
>gi|312079151|ref|XP_003142050.1| hypothetical protein LOAG_06466 [Loa loa]
Length = 631
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 32/218 (14%)
Query: 300 KKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNA-GLADFQSVLTTFTRY 358
+ R+ L++ Y +R N ++ +D ++ G++ L DF VL ++Y
Sbjct: 280 RSRLQQHMAGLEQAYFSRR---LNNTESRSITDDSL----GFSCDTLDDFSQVLHGMSQY 332
Query: 359 SRLRVIAELRH--GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
R +A L + D + +IVSSIEFD+D + F AGV++RIKV++F SV+ +H
Sbjct: 333 GSFRRLASLNYNVADATAALSIVSSIEFDKDGEFFILAGVAKRIKVYEFQSVIENTDTLH 392
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVD- 475
PV ++ SK+S +SWN + K+ +ASSDY+G V +WD + +S+ Y + + WS+
Sbjct: 393 YPVTQLQCTSKISNVSWNPYCKSTLASSDYDGTVQLWDTSLARSIRRY---QVKLWSIGV 449
Query: 476 -----------------FSRTEPSMLVSGS-DDCKVLY 495
FS T+ + LV GS D C LY
Sbjct: 450 DRSVATIDAKVNVCCVCFSPTQRNYLVFGSADHCIHLY 487
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL---TNNQLYPNF----LL 107
CPIC Q+ +E + T CGHSFC CI HL CP C L + ++PNF ++
Sbjct: 67 CPICFQLFREPYSTLCGHSFCRECISAHLERSLRCPVCSRGLDPRSGPIVFPNFTAASIV 126
Query: 108 DKLLKKT-SARQISKTASPLENF----RQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
D + + +AR ++ + E + + + +D M LL +++ ++
Sbjct: 127 DAIRRNMKTARSLTAASGRNEGLELTSEKLIDLALNADARFLDHFMDLLKKRREQISSNV 186
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
R +L +F+ + Q+ ++LK++Q +L ++ D +V+
Sbjct: 187 TRRKNMLLNEFIDEMITQREEKLKQLQNELSILRNDKASVQ 227
>gi|393911987|gb|EJD76535.1| E3 ubiquitin-protein ligase RFWD2 [Loa loa]
Length = 406
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 32/218 (14%)
Query: 300 KKRVHAQFNDLQECYLQKRRQMANQPHTKQESDKNIIHREGYNA-GLADFQSVLTTFTRY 358
+ R+ L++ Y +R N ++ +D ++ G++ L DF VL ++Y
Sbjct: 55 RSRLQQHMAGLEQAYFSRR---LNNTESRSITDDSL----GFSCDTLDDFSQVLHGMSQY 107
Query: 359 SRLRVIAELRH--GDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH 416
R +A L + D + +IVSSIEFD+D + F AGV++RIKV++F SV+ +H
Sbjct: 108 GSFRRLASLNYNVADATAALSIVSSIEFDKDGEFFILAGVAKRIKVYEFQSVIENTDTLH 167
Query: 417 CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVD- 475
PV ++ SK+S +SWN + K+ +ASSDY+G V +WD + +S+ Y + + WS+
Sbjct: 168 YPVTQLQCTSKISNVSWNPYCKSTLASSDYDGTVQLWDTSLARSIRRY---QVKLWSIGV 224
Query: 476 -----------------FSRTEPSMLVSGS-DDCKVLY 495
FS T+ + LV GS D C LY
Sbjct: 225 DRSVATIDAKVNVCCVCFSPTQRNYLVFGSADHCIHLY 262
>gi|424513549|emb|CCO66171.1| predicted protein [Bathycoccus prasinos]
Length = 849
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 85/126 (67%), Gaps = 8/126 (6%)
Query: 376 ANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPA---DVHCPVV---EMPTRSKLS 429
++IVSSI+ D +FATAGVS+RI+ + F + + A + P + ++ +SK+S
Sbjct: 479 SDIVSSIDVSMDQTMFATAGVSKRIEFYTFTDICDRTAANQNEERPRITRAQIKVKSKIS 538
Query: 430 CLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM--LVSG 487
CLS+++ + IA+SDYEG+VT+WD T QS++++EEH+KR W+V++ R +M + SG
Sbjct: 539 CLSFSRKHVSHIAASDYEGVVTIWDAETSQSILKFEEHDKRCWTVEYCRCVDNMHLIASG 598
Query: 488 SDDCKV 493
SDD V
Sbjct: 599 SDDGAV 604
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH 82
LD CPIC +I K F CGH+FC+ C++ H
Sbjct: 10 LDDSRTCPICREIYKAPFNATCGHTFCHDCVVEH 43
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 80 ITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTS-----ARQISKTASPLE------- 127
+ N + CP C +T+ L PN L K++ + QI++ SP+E
Sbjct: 121 LVDFSNPAPCPICNASITS--LTPNVALTKVVDALARVDAMTMQITEEHSPMEPQHSKIA 178
Query: 128 ---NFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDE 184
ALQ + +++ ++ L EK + E E+ ++IL DF ++K +
Sbjct: 179 RAEKVVSALQH---MDEEQLAPIVKALVEKHARAVAEGEEKRLEILRDFFDEATRRKRMK 235
Query: 185 LKEIQTDLHYIKEDINAVER 204
+ E + ++ +++ DI VE+
Sbjct: 236 MAEGEMEMKFLRTDIERVEK 255
>gi|2285947|emb|CAA04168.1| COP1 protein [Arabidopsis thaliana]
Length = 49
Score = 96.3 bits (238), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/49 (91%), Positives = 48/49 (97%)
Query: 344 GLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFA 392
GLADFQSVLTTFTRYSRLRVIA++RHGDIFHSANIVSSIEFD DD+LFA
Sbjct: 1 GLADFQSVLTTFTRYSRLRVIAQIRHGDIFHSANIVSSIEFDPDDELFA 49
>gi|293333135|ref|NP_001170311.1| uncharacterized protein LOC100384276 [Zea mays]
gi|224034979|gb|ACN36565.1| unknown [Zea mays]
Length = 268
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
MP++SKLSC+ WN + KN +AS+DY+G V +WD ++ Q ++ EH KR WSV FS +P
Sbjct: 1 MPSKSKLSCVCWNNYIKNYLASTDYDGTVQLWDASSGQGFTQFTEHRKRTWSVSFSDVDP 60
Query: 482 SMLVSGSDDCKV 493
+ L SGSDDC V
Sbjct: 61 TKLASGSDDCCV 72
>gi|193785518|dbj|BAG50884.1| unnamed protein product [Homo sapiens]
Length = 265
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
M SK+SC+SW+ + KN +ASSDYEG V +WD T Q Y+EHEKR WSVDF+ +P
Sbjct: 1 MTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDP 60
Query: 482 SMLVSGSDDCKV 493
+L SGSDD KV
Sbjct: 61 KLLASGSDDAKV 72
>gi|328767564|gb|EGF77613.1| hypothetical protein BATDEDRAFT_13928 [Batrachochytrium
dendrobatidis JAM81]
Length = 279
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
M +RSK+SCLS+N + K + SSDYEG+VT+WD + +++ +EHEKR WSVDFS T+P
Sbjct: 1 MSSRSKISCLSYNAYIKPYLLSSDYEGVVTLWDASMGVALLALDEHEKRTWSVDFSTTDP 60
Query: 482 SMLVSGSDDCKV 493
+ SGSDD +V
Sbjct: 61 MRIASGSDDTRV 72
>gi|395530863|ref|XP_003767506.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial
[Sarcophilus harrisii]
Length = 175
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Query: 67 LTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKTSAR------QI 119
+T CGHSFCY CI L + + CP C + + N + LYPNFL+++L+ K R ++
Sbjct: 1 MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKL 60
Query: 120 SKTASPLENFR-QALQQGCG-----VSVKEIDSLMSLLSEKKRKMEQEEAERNMQILLDF 173
+ S R Q Q G + + ++ ++ LL +KK+++E E +QIL++F
Sbjct: 61 DHSVSSTNGHRWQIFQDLLGTDQDNLDLPNVNLMLELLVQKKKQLEAESHAAQLQILMEF 120
Query: 174 LHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
L R+ K ++L++IQ +L ++EDI VE
Sbjct: 121 LKVARRNKREQLEQIQKELSVLEEDIKRVE 150
>gi|302143002|emb|CBI20297.3| unnamed protein product [Vitis vinifera]
Length = 125
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 422 MPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEP 481
M RSKLS + WN + K++IASS++EG+V VWDVT Q + E EHE+R WS+D+S +P
Sbjct: 1 MACRSKLSSICWNSYIKSQIASSNFEGVVQVWDVTRSQVLTEMREHERRVWSIDYSLADP 60
Query: 482 SMLVSGSDDCKV 493
+ML SGSDD V
Sbjct: 61 TMLASGSDDGSV 72
>gi|168007458|ref|XP_001756425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692464|gb|EDQ78821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 329
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVN---EPADV---HCPVVEMPTRSKL 428
S +I+ +I F++ + FAT G++R+I+V+ ++ +V+ D+ C V E+ T +KL
Sbjct: 2 STDIIGTIAFEKTHEYFATGGIARKIRVYAYSPLVSGLTSAIDIDHARCCVQEVCTPAKL 61
Query: 429 SCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSMLVSG 487
S L W++ N IA DY+G+V WDV ++ E +E+ +R WS+D+S+ P ++ S
Sbjct: 62 SSLQWHQERPNVIACGDYDGVVAEWDVERMCAICERDENGGQRIWSIDYSKDFPDLIASA 121
Query: 488 SDDCKV 493
SDD V
Sbjct: 122 SDDGTV 127
>gi|307107086|gb|EFN55330.1| hypothetical protein CHLNCDRAFT_57959 [Chlorella variabilis]
Length = 625
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 374 HSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTR-----SKL 428
H ++V ++EF+ L A+AGVS++++V+ AS + P D P P R SKL
Sbjct: 263 HRQDMVCALEFEEHGWLLASAGVSKQVRVYSLASCLQHPGD---PAYTQPIRCHRMASKL 319
Query: 429 SCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGS 488
S L+WN + + +DY+G+V+ D+ + + E +EH R WSV S P + S S
Sbjct: 320 SSLAWNPDAPGAVTVADYDGVVSQVDMESGHLIAEADEHAGRVWSVSHSLQRPHLCASAS 379
Query: 489 DDCKV 493
DD V
Sbjct: 380 DDGTV 384
>gi|21592812|gb|AAM64761.1| contains similarity to photomorphogenesis repressor protein
[Arabidopsis thaliana]
Length = 385
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVE--MPTRSKLSCLS 432
++ + +IEFD ++ AT G++R+I+ + +S++ E D H E + T +KLS L
Sbjct: 70 GSDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASESCICTPAKLSSLK 128
Query: 433 WNK-FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSML-VSGSD 489
W FS I S DY+G+VT +DV Q V E +EH +R WSVD++ S+L SGSD
Sbjct: 129 WRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLLGASGSD 188
Query: 490 DCKV 493
D V
Sbjct: 189 DGTV 192
>gi|116283971|gb|AAH20845.1| RFWD2 protein [Homo sapiens]
Length = 257
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR 117
+ K R
Sbjct: 193 ILKQKQR 199
>gi|168061990|ref|XP_001782967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665532|gb|EDQ52213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 469
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 36/155 (23%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH------------------ 416
S +++ +I F++ ++ FAT G++R+I+V+ ++ +V+ + +
Sbjct: 100 STDVIGTIAFEKTNEYFATGGIARKIRVYSYSQLVSGVSSTYEDEDEDEDEEESLDYLKQ 159
Query: 417 -----------------CPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQ 459
C V E+ T +KLS L W + N IA DY+G+V WD+
Sbjct: 160 RRLRKRRASTSEIDHARCCVQEVCTPAKLSSLQWYQERPNLIACGDYDGVVAEWDLERNC 219
Query: 460 SVMEYEEH-EKRAWSVDFSRTEPSMLVSGSDDCKV 493
++ E +E+ +R WS+D+S+ P+++ S SDD V
Sbjct: 220 TISERDENGGQRIWSIDYSKDFPNLIASASDDGTV 254
>gi|15242945|ref|NP_200038.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|8885538|dbj|BAA97468.1| unnamed protein product [Arabidopsis thaliana]
gi|27808604|gb|AAO24582.1| At5g52250 [Arabidopsis thaliana]
gi|110736198|dbj|BAF00070.1| hypothetical protein [Arabidopsis thaliana]
gi|332008809|gb|AED96192.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 385
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVE--MPTRSKLSCLS 432
++ + +IEFD ++ AT G++R+I+ + +S++ E D H E + T +KLS L
Sbjct: 70 GSDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASESYICTPAKLSSLK 128
Query: 433 WNK-FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSML-VSGSD 489
W FS I S DY+G+VT +DV Q V E +EH +R WSVD++ S++ SGSD
Sbjct: 129 WRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSD 188
Query: 490 DCKV 493
D V
Sbjct: 189 DGTV 192
>gi|449461297|ref|XP_004148378.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 383
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMP----------T 424
+++ + +EFD D L ATAG++R+I+ + +++ + D + + ++ T
Sbjct: 49 ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
Query: 425 RSKLSCLSWNKFSKNRI-ASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPS 482
+KLS L W + RI S DY+G+V +D+ + + E +EH +R WSVD+S EP
Sbjct: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
Query: 483 MLVSGSDDCKV 493
+ SGSDD V
Sbjct: 169 VGASGSDDGTV 179
>gi|380791671|gb|AFE67711.1| E3 ubiquitin-protein ligase RFWD2 isoform a, partial [Macaca
mulatta]
Length = 224
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR 117
+ K R
Sbjct: 193 ILKQKQR 199
>gi|449517463|ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
COP1-like [Cucumis sativus]
Length = 384
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMP----------T 424
+++ + +EFD D L ATAG++R+I+ + +++ + D + + ++ T
Sbjct: 49 ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
Query: 425 RSKLSCLSWNKFSKNRI-ASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPS 482
+KLS L W + RI S DY+G+V +D+ + + E +EH +R WSVD+S EP
Sbjct: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
Query: 483 MLVSGSDDCKV 493
+ SGSDD V
Sbjct: 169 VGASGSDDGTV 179
>gi|380791651|gb|AFE67701.1| E3 ubiquitin-protein ligase RFWD2 isoform d24, partial [Macaca
mulatta]
Length = 220
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 111 LKKTSAR 117
+ K R
Sbjct: 193 ILKQKQR 199
>gi|149058293|gb|EDM09450.1| similar to constitutive photomorphogenic protein 1, isoform CRA_a
[Rattus norvegicus]
Length = 251
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKL 110
D +CPIC +I+EA++T CGHSFCY CI L + + CP C + + N + LYPNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194
Query: 111 LKKTSAR 117
+ K R
Sbjct: 195 ILKQKQR 201
>gi|225470155|ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 382
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 20/136 (14%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH---------------CPV 419
S + + IEFD D L AT G++R+I+V+ S++ P + H C
Sbjct: 54 STDTIGVIEFDPSDNLVATGGIARKIRVYSVKSLL--PGENHSHGEHNVKLLQHNNACDY 111
Query: 420 VEMPTRSKLSCLSWNKFSKNRI-ASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFS 477
+ T +KLS L W S R+ S DY+G+VT +D+ + + E +EH +R WSVD+S
Sbjct: 112 Y-IWTPAKLSSLRWKPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRIWSVDYS 170
Query: 478 RTEPSMLVSGSDDCKV 493
P + SGSDD +
Sbjct: 171 HWNPFVGASGSDDGTI 186
>gi|302773880|ref|XP_002970357.1| hypothetical protein SELMODRAFT_147206 [Selaginella moellendorffii]
gi|300161873|gb|EFJ28487.1| hypothetical protein SELMODRAFT_147206 [Selaginella moellendorffii]
Length = 467
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVN-------EPADVHCPVVEMPTRSK 427
S++++S+I++D QL AT G++R+I++ + +VN + +V + +K
Sbjct: 124 SSDVISTIDYDETGQLIATGGLARKIRICSYQELVNGMGRECFQGRNVKNLFTTICMPAK 183
Query: 428 LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR-AWSVDFSRTEPSMLVS 486
LS L W IA DY+G VT WDV +V E EH R WS+D+SR +L S
Sbjct: 184 LSSLKWRPGGSEVIACGDYDGSVTEWDVEHGVTVSERYEHTGRTVWSIDYSRDFRGLLAS 243
Query: 487 GSDDCKVLY 495
S D V +
Sbjct: 244 ASSDSTVRF 252
>gi|225470157|ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 383
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVH-------------CPVVE 421
S + + IEFD D L T G++R+I+V+ S +++ H C
Sbjct: 54 STDTIGIIEFDPSDNLVVTGGIARKIRVYSIKSFLSDENHSHGERKVTWLQHNDACDYY- 112
Query: 422 MPTRSKLSCLSWNKFSKNRI-ASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRT 479
+ T +KLS L W S R+ S DY+G+VT +D+ + + E +EH +R WSVD+S
Sbjct: 113 VCTPAKLSSLRWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGGRRIWSVDYSHW 172
Query: 480 EPSMLVSGSDD 490
+P + SGSDD
Sbjct: 173 DPFVGASGSDD 183
>gi|393911986|gb|EJD76534.1| hypothetical protein LOAG_16547 [Loa loa]
Length = 235
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL---TNNQLYPNF----LL 107
CPIC Q+ +E + T CGHSFC CI HL CP C L + ++PNF ++
Sbjct: 67 CPICFQLFREPYSTLCGHSFCRECISAHLERSLRCPVCSRGLDPRSGPIVFPNFTAASIV 126
Query: 108 DKLLKKT-SARQISKTASPLENF----RQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
D + + +AR ++ + E + + + +D M LL +++ ++
Sbjct: 127 DAIRRNMKTARSLTAASGRNEGLELTSEKLIDLALNADARFLDHFMDLLKKRREQISSNV 186
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
R +L +F+ + Q+ ++LK++Q +L ++ D +V+
Sbjct: 187 TRRKNMLLNEFIDEMITQREEKLKQLQNELSILRNDKASVQ 227
>gi|384249757|gb|EIE23238.1| WD40 repeat-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 266
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 376 ANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVN---EPADVHCPVVE-MPTRSKLSCL 431
A+IV S+EF D L A+AGV+++I+V+ AS+ N +P V + +P SK+S +
Sbjct: 1 ADIVCSVEFSPDGSLLASAGVAKQIRVYPLASIRNGEYDPEPVAAAFIHRLP--SKMSSV 58
Query: 432 SWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 490
+W+ F + + DY+G+V + + + + +EH +R WSV S P + S SDD
Sbjct: 59 AWSPFDEGVLTVGDYDGVVAQVHIPSGHLIADVDEHAGRRVWSVAHSTLRPHLCASASDD 118
>gi|302769404|ref|XP_002968121.1| hypothetical protein SELMODRAFT_409247 [Selaginella moellendorffii]
gi|300163765|gb|EFJ30375.1| hypothetical protein SELMODRAFT_409247 [Selaginella moellendorffii]
Length = 499
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVN-------EPADVHCPVVEMPTRSK 427
S++++S+I++D QL AT G++R+I++ + +VN + +V + +K
Sbjct: 163 SSDVISTIDYDETGQLIATGGLARKIRICSYQELVNGMGRECFQGRNVKNLFTTICMPAK 222
Query: 428 LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR-AWSVDFSRTEPSMLVS 486
LS L W S IA DY+G VT WDV +V E EH R WS+D+ R +L S
Sbjct: 223 LSSLKWRPGSSEVIACGDYDGSVTEWDVEHGVTVSERYEHTGRTVWSIDYCRDFRGLLAS 282
Query: 487 GSDDCKVLY 495
S D V +
Sbjct: 283 ASSDSTVRF 291
>gi|297808375|ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317908|gb|EFH48330.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 377 NIVSSIEFDRDDQLFATAGVSRRIKVFDFASVV--NEPADVHCPVVE--------MPTRS 426
+++ +IEFD D + ATAG+SR+I+ + S++ N + V+ + T +
Sbjct: 38 DVIGAIEFDPTDNIVATAGISRKIRFYGLPSLLRTNAVSGTGVSFVDQATACEYYICTPA 97
Query: 427 KLSCLSWNKFSKNR-IASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSML 484
KLS L W S +R I S DY+G+VT +D+ + V E +EH +R WSVD++R +
Sbjct: 98 KLSSLRWRPGSGSRVIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGDASA 157
Query: 485 V--SGSDD 490
V SGSDD
Sbjct: 158 VGASGSDD 165
>gi|255575819|ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223531761|gb|EEF33581.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 426
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 14/123 (11%)
Query: 382 IEFDRDDQLFATAGVSRRIKVFDFASVVNEPA------DV----HCPVVE--MPTRSKLS 429
IEFD+ + + AT G++R+I+++ S++ + D+ H E + T +KLS
Sbjct: 103 IEFDQSENIVATGGIARKIRIYSIKSLLPQEQQHENGNDIALMDHVNACEFFICTPAKLS 162
Query: 430 CLSWNKFSKNR-IASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSMLVSG 487
L W S R I S DY+G+V +DV T+ + E +EH +R WSVD+S P + SG
Sbjct: 163 SLRWKPCSGGRVIGSGDYDGVVMEYDVETRIPIFERDEHGGRRIWSVDYSHWSPVVGASG 222
Query: 488 SDD 490
SDD
Sbjct: 223 SDD 225
>gi|297792549|ref|XP_002864159.1| hypothetical protein ARALYDRAFT_495294 [Arabidopsis lyrata subsp.
lyrata]
gi|297309994|gb|EFH40418.1| hypothetical protein ARALYDRAFT_495294 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVE--MPTRSKLSCLS 432
++ + +IEFD ++ AT G++R+I+ + +S++ E D H + + T +KLS L
Sbjct: 69 GSDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASDSCIYTPAKLSSLK 127
Query: 433 WNK-FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSML-VSGSD 489
W S I S DY+G+VT +DV Q V E +EH +R WSVD++ S++ SGSD
Sbjct: 128 WRPDLSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSD 187
Query: 490 DCKV 493
D V
Sbjct: 188 DGTV 191
>gi|79518327|ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|10176840|dbj|BAB10046.1| unnamed protein product [Arabidopsis thaliana]
gi|332005822|gb|AED93205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 368
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 14/128 (10%)
Query: 377 NIVSSIEFDRDDQLFATAGVSRRIKVFDFASVV--NEPADVHCPVVE--------MPTRS 426
+++ +IEFD D + ATAG+SR+I+ + S++ N + V+ + T +
Sbjct: 41 DVIGAIEFDPTDNIVATAGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPA 100
Query: 427 KLSCLSWNKFSKNR-IASSDYEGIVTVWDVTTQQSVMEYEEH-EKRAWSVDFSRTEPSML 484
KLS L W S R I S DY+G+V +D+ + V E +EH +R WSVD++R +
Sbjct: 101 KLSSLRWRPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGAST 160
Query: 485 V--SGSDD 490
V SGSDD
Sbjct: 161 VGASGSDD 168
>gi|402590837|gb|EJW84767.1| hypothetical protein WUBG_04321 [Wuchereria bancrofti]
Length = 234
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYL---TNNQLYPNF----LL 107
CPIC Q+ +E + T CGHSFC CI HL CP C L + ++PNF ++
Sbjct: 67 CPICFQLFREPYSTLCGHSFCRECISAHLERSLRCPVCSQGLDPRSGPIVFPNFTAASIV 126
Query: 108 DKLLKKT-SARQISKTASPLENFRQALQQGCGVSVKE----IDSLMSLLSEKKRKMEQEE 162
D + + +AR ++ + E ++ +++ +D M LL +++ ++
Sbjct: 127 DAIRRNMKTARNLAAASGRNEGLELTSEKLVDLALNADAGFLDHFMDLLKKRREQISNNV 186
Query: 163 AERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
R +L +F+ + Q+ ++LK++Q +L ++ D +++
Sbjct: 187 TRRKNLLLNEFIDEMIVQREEKLKQLQNELSILRNDKASIQ 227
>gi|326487848|dbj|BAJ89763.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 412
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVV 420
R+ A + + ++ + S++FD +L AT G++R+++++ A + + P+ C V
Sbjct: 66 FRLAATVPSPSLAGASEAIGSVDFDPAGRLLATGGIARKVRIYGVAGLPSSPSPAACICV 125
Query: 421 EMPTRSKLSCLSW--NKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHE-KRAWSVDFS 477
+KLS + W + + DY+G+VT +DV + E +EH +R W++D++
Sbjct: 126 P----AKLSSVRWRPEEGGGRAVGCGDYDGVVTEYDVERGVAAWERDEHAGRRVWALDYA 181
Query: 478 -RTEP-SMLVSGSDD 490
R P SM SGSDD
Sbjct: 182 PRGAPTSMAASGSDD 196
>gi|313231899|emb|CBY09011.1| unnamed protein product [Oikopleura dioica]
Length = 886
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
G + + D+ C IC+ + KE +T CGH+FC C+ L CP C ++ N +PN
Sbjct: 54 GPTVFEPDLHCSICVSMFKEPHVTRCGHTFCRGCLSRSLAISPKCPKCDTPVSRNDHFPN 113
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
++ +++ R +K Q + + V I S++ L E++ +E +
Sbjct: 114 HAINDMIR---VRHRNKKHLEHMTIDQIVNLPGNIPVDSITSIIDALQERREVIEDRQQC 170
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERH 205
+ +L FL ++K K +EL ++ + I+ D+ ER+
Sbjct: 171 IHKHMLHHFLIKMKKMKQNELDNLRREFKTIEADLEISERN 211
>gi|313217525|emb|CBY38605.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
G + + D+ C IC+ + KE +T CGH+FC C+ L CP C ++ N +PN
Sbjct: 54 GPTVFEPDLHCSICVSMFKEPHVTRCGHTFCRGCLSRSLAISPKCPKCDTPVSRNDHFPN 113
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
++ +++ R +K Q + + V I S++ L E++ +E +
Sbjct: 114 HAINDMIR---VRHRNKKHLEHMTIDQIVNLPGNIPVDSIISIIDALQERREVIEDRQQC 170
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVER 204
+ +L FL ++K K +EL ++ + I+ D+ ER
Sbjct: 171 IHKHMLHHFLIKMKKMKQNELDNLRREFKTIEADLEISER 210
>gi|41052591|dbj|BAD07933.1| putative COP1 [Oryza sativa Japonica Group]
gi|41052817|dbj|BAD07708.1| putative COP1 [Oryza sativa Japonica Group]
Length = 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 323 NQPHTKQESDKNIIHREGYNAGL-ADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSS 381
Q H + D+ + +E AG+ D + L+ R+ A + + +++ + S
Sbjct: 16 QQLHDQDHRDEAALQQEHAAAGIIPDDEDKLSPPRCEWEFRLAATVPSPALAGASDSIGS 75
Query: 382 IEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRI 441
++FD + AT G++R+I+++ V EP+ P + +KLS + W +
Sbjct: 76 LDFDPTGRHLATGGIARKIRIYR----VAEPS---SPAACICVPAKLSSVRWRPGGGEAV 128
Query: 442 ASS-----DYEGIVTVWDVTTQQSVMEYEEHE-KRAWSVDFSR--TEPSMLVSGSDD 490
A+S DY+G+VT +DV V E +EHE +R W++D++R +M+ SGSDD
Sbjct: 129 AASHVGCGDYDGVVTEYDVERGVPVWERDEHEGRRVWALDYARGGGAATMVASGSDD 185
>gi|125537798|gb|EAY84193.1| hypothetical protein OsI_05571 [Oryza sativa Indica Group]
Length = 404
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 323 NQPHTKQESDKNIIHREGYNAGL-ADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSS 381
Q H + D+ + +E AG+ D + L+ R+ A + + +++ + S
Sbjct: 16 QQLHDQDHRDEAALQQEHAAAGIIPDDEDKLSPPRCEWEFRLAATVPSPALAGASDSIGS 75
Query: 382 IEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRI 441
++FD + AT G++R+I+++ V EP+ P + +KLS + W +
Sbjct: 76 LDFDPTGRHLATGGIARKIRIYR----VAEPS---SPAACICVPAKLSSVRWRPGGGEAV 128
Query: 442 ASS-----DYEGIVTVWDVTTQQSVMEYEEHE-KRAWSVDFSR--TEPSMLVSGSDD 490
A+S DY+G+VT +DV V E +EHE +R W++D++R +M+ SGSDD
Sbjct: 129 AASHVGCGDYDGVVTEYDVERGVPVWERDEHEGRRVWALDYARGGGAATMVASGSDD 185
>gi|401626543|gb|EJS44478.1| rad18p [Saccharomyces arboricola H-6]
Length = 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
+TS + +LD + C IC +K LT CGH+FC +CI HL N+ +CP C +
Sbjct: 13 TTSIPHLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIREHLNNQPNCPLCLFEFRES 72
Query: 100 QLYPNFLLDKLLKKTSARQIS-----KTASPLENFRQALQQGCGVSVKEIDSLMSLLSE 153
L FL++++++ ++ + S K PL N C + + + SL+ L+SE
Sbjct: 73 LLRSEFLVNEIIQSYTSIRPSLLNALKIEKPLTN-----SNSCKIPITQDSSLIELISE 126
>gi|302786196|ref|XP_002974869.1| hypothetical protein SELMODRAFT_101888 [Selaginella moellendorffii]
gi|300157764|gb|EFJ24389.1| hypothetical protein SELMODRAFT_101888 [Selaginella moellendorffii]
Length = 218
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 459 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
QS+MEYEEH KRAWSVDF+RT+P++LVSGSDD K+
Sbjct: 1 QSIMEYEEHAKRAWSVDFARTDPNLLVSGSDDGKL 35
>gi|62321324|dbj|BAD94577.1| putative photomorphogenesis repressor protein [Arabidopsis
thaliana]
Length = 241
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 449 IVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+V +WD T Q +Y EH+KRAWSVDFS ++P+ VSGSDDC V
Sbjct: 1 VVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 45
>gi|302794955|ref|XP_002979241.1| hypothetical protein SELMODRAFT_444188 [Selaginella moellendorffii]
gi|300153009|gb|EFJ19649.1| hypothetical protein SELMODRAFT_444188 [Selaginella moellendorffii]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 42/157 (26%)
Query: 374 HSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADV------------------ 415
H+ + S+ FD ++L AT G++R+I+V+D +++++
Sbjct: 68 HATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEDKQQQDQAADEDDEDGLEDED 127
Query: 416 ---------------------HCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWD 454
V+ P+R LS L W IA DY+G+VT W
Sbjct: 128 EEGRFVSSRRRARNTFDTDRSSLSVICAPSR--LSSLQWRPGKTGTIACGDYDGVVTEWS 185
Query: 455 VTTQQSVMEYEEHEKR-AWSVDFSRTEPSMLVSGSDD 490
V Q ++E +EH R WSVD++ + VS SDD
Sbjct: 186 VERQIPLVERDEHGGRHVWSVDYATDMSGVCVSASDD 222
>gi|148701481|gb|EDL33428.1| mCG1049275 [Mus musculus]
Length = 90
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKT 114
PIC + +EA++T CG SFCY CI L + + CP C + + N + LYPNFL+++L+ K
Sbjct: 1 PICFGMTEEAYMTKCGLSFCYNCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 60
Query: 115 SAR 117
R
Sbjct: 61 KQR 63
>gi|149584809|ref|XP_001508094.1| PREDICTED: tripartite motif-containing protein 69-like
[Ornithorhynchus anatinus]
Length = 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 17 MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCY 76
M S++T ++ AAA+ SE V E+ +D+ CP+C + L ACGH+FC
Sbjct: 1 MPTMSSNTEEKKGPAAASSLDPHMASEAQVEEIMQDLSCPLCRDWFGDPILLACGHNFCS 60
Query: 77 MCI--ITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQ 134
+C+ + R + CP C + Q PN+ L +L++K + + + ++L+
Sbjct: 61 ICLSGLWGQREDTYCPECQQLCQDRQGTPNWALGRLVEKVRGLPLGRGQPQCQEHNESLK 120
Query: 135 QGCGVSVK 142
C S K
Sbjct: 121 LFCKQSGK 128
>gi|293341762|ref|XP_002725041.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Rattus
norvegicus]
gi|293353201|ref|XP_001070577.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Rattus
norvegicus]
Length = 154
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLL 111
M PIC ++++A++T CGHS CY CI L + + CP C H + + + LYPNFL+++L+
Sbjct: 34 MASPICFDMVEDAYMTKCGHSVCYNCIHQSLEDNNRCPKCNHVVDDIDLLYPNFLVNELI 93
Query: 112 KKTSAR 117
K R
Sbjct: 94 LKQKQR 99
>gi|357138463|ref|XP_003570811.1| PREDICTED: protein SPA1-RELATED 3-like [Brachypodium distachyon]
Length = 421
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVV-----NEPADV 415
R+ A + + +++ + S++FD L ATAG++R++++++ A+++ + PA
Sbjct: 59 FRLAATVPSPAMVGASDAIGSVDFDPSGSLLATAGIARKVRIYNAATLLLDQQSSSPAAC 118
Query: 416 HCPVVEMPTRSKLSCLSWNKFSKNR---IASSDYEGIVTVWDVT-TQQSVMEYEEHE-KR 470
C +KLS + W S + + DY+G+VT +D+ + E +EH +R
Sbjct: 119 IC------VPAKLSSVRWRPDSSSSGRFVGCGDYDGVVTEYDLDRGGAATWERDEHSGRR 172
Query: 471 AWSVDFSRTEPSMLVSGSDD 490
W++D+S + SM SGSDD
Sbjct: 173 VWALDYSPSS-SMAASGSDD 191
>gi|413936614|gb|AFW71165.1| hypothetical protein ZEAMMB73_146858 [Zea mays]
Length = 287
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 47/102 (46%), Gaps = 52/102 (50%)
Query: 382 IEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRI 441
IEFDRDD+LFAT GVS+RIK
Sbjct: 66 IEFDRDDELFATDGVSKRIK---------------------------------------- 85
Query: 442 ASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM 483
V++ +T SVMEYEEHEKRAWSVDFSRT+ SM
Sbjct: 86 ----------VFEFST--SVMEYEEHEKRAWSVDFSRTDSSM 115
>gi|302817272|ref|XP_002990312.1| hypothetical protein SELMODRAFT_447996 [Selaginella moellendorffii]
gi|300141874|gb|EFJ08581.1| hypothetical protein SELMODRAFT_447996 [Selaginella moellendorffii]
Length = 436
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 42/157 (26%)
Query: 374 HSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADV------------------ 415
H+ + S+ FD ++L AT G++R+I+V+D +++++
Sbjct: 68 HATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEEKQQQDQAADEDDEDGLEDED 127
Query: 416 ---------------------HCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWD 454
V+ P+R LS L W I DY+G+VT W
Sbjct: 128 EEGRFVSSRRRARNTFDTDRSSLSVICAPSR--LSSLQWRPGKTGTITCGDYDGVVTEWS 185
Query: 455 VTTQQSVMEYEEHEKR-AWSVDFSRTEPSMLVSGSDD 490
V Q ++E +EH R WSVD++ + VS SDD
Sbjct: 186 VERQIPLVERDEHGGRHVWSVDYATGMSDVCVSASDD 222
>gi|344306461|ref|XP_003421906.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31-like [Loxodonta
africana]
Length = 559
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQL 101
VS L ++++CPIC+ I+++A CGHSFC C I+ ++ SD CP C + + L
Sbjct: 7 VSNLQEEVICPICIDILQDAVTIDCGHSFCLSC-ISWTQDPSDGLLKCPLCKKSVRKDTL 65
Query: 102 YPNFLLDKLLKKTSARQISKTASPLE 127
PN+LL L++K A SPLE
Sbjct: 66 RPNWLLMNLVEKIQA------MSPLE 85
>gi|297720547|ref|NP_001172635.1| Os01g0830200 [Oryza sativa Japonica Group]
gi|56202103|dbj|BAD73632.1| putative ring finger protein 5 [Oryza sativa Japonica Group]
gi|56785168|dbj|BAD81844.1| putative ring finger protein 5 [Oryza sativa Japonica Group]
gi|215697377|dbj|BAG91371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704669|dbj|BAG94297.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189311|gb|EEC71738.1| hypothetical protein OsI_04298 [Oryza sativa Indica Group]
gi|222619487|gb|EEE55619.1| hypothetical protein OsJ_03954 [Oryza sativa Japonica Group]
gi|255673841|dbj|BAH91365.1| Os01g0830200 [Oryza sativa Japonica Group]
Length = 561
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 83/215 (38%), Gaps = 46/215 (21%)
Query: 16 DMKPSSTDTAPQETDAAAAYT--------------AAASTSEVGVSELDKD-------ML 54
D+ P S++ P DAAA AA +EVG SE ++
Sbjct: 175 DLPPLSSEAYPAGRDAAAVPVLQHEPMNDTVEHNKVAADGAEVGASEESEEQGRSAATFE 234
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHYLTNNQLYP-----NFL 106
C IC + E +T+CGH FC+ C+ L N +CP C +T + P N
Sbjct: 235 CNICFDMASEPVVTSCGHLFCWPCLYQWLNVYSNHKECPVCKGEVTEANITPIYGRGNSC 294
Query: 107 LDKLLKKTSARQISKTASP------LENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
LD +Q T P LE+FRQ +S + + LLS +R ++Q
Sbjct: 295 LDAEKAVEGGKQTGPTIPPRPHGNRLESFRQQFHHLRPIS-RRLGEAHGLLSSWRRLLDQ 353
Query: 161 E----------EAERNMQILLDFLHCLRKQKVDEL 185
+ E +Q ++D H ++ L
Sbjct: 354 QIMNTASRFEGPPESAVQEMVDTAHAQHTSRLSRL 388
>gi|190406488|gb|EDV09755.1| postreplication repair ubiquitin-protein ligase E3 RAD18
[Saccharomyces cerevisiae RM11-1a]
gi|256270187|gb|EEU05411.1| Rad18p [Saccharomyces cerevisiae JAY291]
gi|259145005|emb|CAY78270.1| Rad18p [Saccharomyces cerevisiae EC1118]
gi|323349542|gb|EGA83764.1| Rad18p [Saccharomyces cerevisiae Lalvin QA23]
Length = 487
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLKK-TSARQISKTASPLENFR----QALQQGCGVSVKEIDSLMSLLSE 153
+ L FL+ ++++ TS R +S L+ R + + V E SL+ L+SE
Sbjct: 72 SLLRSEFLVSEIIQSYTSLR-----SSLLDALRIPKPTPVPENEEVPGPENSSLIELISE 126
>gi|323334419|gb|EGA75796.1| Rad18p [Saccharomyces cerevisiae AWRI796]
Length = 488
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 13 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 72
Query: 99 NQLYPNFLLDKLLKK-TSARQISKTASPLENFR----QALQQGCGVSVKEIDSLMSLLSE 153
+ L FL+ ++++ TS R +S L+ R + + V E SL+ L+SE
Sbjct: 73 SLLRSEFLVSEIIQSYTSLR-----SSLLDALRIPKPTPVPENEEVPGPENSSLIELISE 127
>gi|365766735|gb|EHN08229.1| Rad18p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 487
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLK 112
+ L FL+ ++++
Sbjct: 72 SLLRSEFLVSEIIQ 85
>gi|323338517|gb|EGA79738.1| Rad18p [Saccharomyces cerevisiae Vin13]
Length = 460
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLK 112
+ L FL+ ++++
Sbjct: 72 SLLRSEFLVSEIIQ 85
>gi|6319911|ref|NP_009992.1| E3 ubiquitin-protein ligase RAD18 [Saccharomyces cerevisiae S288c]
gi|131780|sp|P10862.1|RAD18_YEAST RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18; AltName: Full=Radiation sensitivity protein 18
gi|4267|emb|CAA31101.1| unnamed protein product [Saccharomyces cerevisiae]
gi|172322|gb|AAA34932.1| DNA repair protein (RAD18) [Saccharomyces cerevisiae]
gi|1907206|emb|CAA42281.1| DNA repair protein [Saccharomyces cerevisiae]
gi|62122103|emb|CAA31059.1| RAD18 [Saccharomyces cerevisiae]
gi|285810754|tpg|DAA07538.1| TPA: E3 ubiquitin-protein ligase RAD18 [Saccharomyces cerevisiae
S288c]
gi|226104|prf||1410314A RAD18 gene
Length = 487
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLK 112
+ L FL+ ++++
Sbjct: 72 SLLRSEFLVSEIIQ 85
>gi|151943879|gb|EDN62179.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 487
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLK 112
+ L FL+ ++++
Sbjct: 72 SLLRSEFLVSEIIQ 85
>gi|349576799|dbj|GAA21969.1| K7_Rad18p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300708|gb|EIW11798.1| Rad18p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 487
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLK 112
+ L FL+ ++++
Sbjct: 72 SLLRSEFLVSEIIQ 85
>gi|323310008|gb|EGA63204.1| Rad18p [Saccharomyces cerevisiae FostersO]
Length = 487
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLKK-TSARQISKTASPLENFR----QALQQGCGVSVKEIDSLMSLLSE 153
+ L FL+ ++++ TS R +S L+ R + + V E SL+ L+SE
Sbjct: 72 SLLRSEFLVSEIIQSYTSLR-----SSLLDALRIPKPTPVPENEEVPGPENSSLIELISE 126
>gi|323355962|gb|EGA87770.1| Rad18p [Saccharomyces cerevisiae VL3]
Length = 487
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+TS + +LD + C IC +K LT CGH+FC +CI THL N+ +CP C
Sbjct: 12 TTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE 71
Query: 99 NQLYPNFLLDKLLK 112
+ L FL+ ++++
Sbjct: 72 SLLRSEFLVSEIIQ 85
>gi|194578815|ref|NP_001124134.1| uncharacterized protein LOC100170828 [Danio rerio]
gi|190338807|gb|AAI62527.1| Similar to Tripartite motif-containing protein 62 [Danio rerio]
Length = 426
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY- 102
+ L +D+ C IC ++ KE + C H FC CI+++ +R+ CP C N +
Sbjct: 8 TSLREDLTCAICFELFKEPVMLGCMHHFCRRCIVSYWKSVRSPVTCPQCRQEFPNKCCFQ 67
Query: 103 PNFLLDKLLKKTSARQISKTASPLEN-FRQALQQGCGVSVKEIDSLMSLLSEKKRKME-- 159
N+L+ L++K A + LE L+ C + DS +S++ + K KME
Sbjct: 68 ANYLVANLVEKVRASSSPASVKYLEKELNDCLESQCSMK----DSYISMIRKDKDKMEKI 123
Query: 160 -------QEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERH 205
Q + Q L FL + ++ELK Q ++ + +ERH
Sbjct: 124 KKTGAELQGRVHNDFQALHHFLRVEEEAMIEELKREQEEM------LQGLERH 170
>gi|159464074|ref|XP_001690267.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284255|gb|EDP10005.1| predicted protein [Chlamydomonas reinhardtii]
Length = 280
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPAD----------VHCPVVE-MP 423
A IV ++EF D +L A GV ++I++++ +S + D VV+ MP
Sbjct: 6 GAGIVCALEFSPDGRLLAAGGVDKQIRLYNLSSFFGDLEDDDELGLLTDAADGAVVQRMP 65
Query: 424 TRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR-AWSVDFSRTEPS 482
SK+SC+SW+ F + DY+G++ + + + + + H R WSV S P
Sbjct: 66 --SKVSCISWSPFMDGVMTVGDYDGVLLQLHIASGHQLSDVDAHGGRKIWSVAHSSRRPH 123
Query: 483 MLVSGSDD 490
+ S +DD
Sbjct: 124 LAASAADD 131
>gi|50305263|ref|XP_452591.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690357|sp|Q6CTZ8.1|RAD18_KLULA RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|49641724|emb|CAH01442.1| KLLA0C08756p [Kluyveromyces lactis]
Length = 427
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 41 TSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQ 100
TS +++LD + C IC +K + LT CGHSFC +CI +L+ +S CP C LT +
Sbjct: 18 TSVPQLTDLDSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQKESKCPLCLSDLTESM 77
Query: 101 LYPNFLLDKL 110
L FL+ ++
Sbjct: 78 LQKEFLVQEI 87
>gi|367009578|ref|XP_003679290.1| hypothetical protein TDEL_0A07470 [Torulaspora delbrueckii]
gi|359746947|emb|CCE90079.1| hypothetical protein TDEL_0A07470 [Torulaspora delbrueckii]
Length = 408
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
A T+ +++LDK + C IC + ++ LT CGH+FC +CI +LR CP C + L
Sbjct: 12 AQTAIPQLTQLDKLLRCHICKEFLRVPVLTPCGHTFCSLCIRQYLRQDPKCPLCLNELRE 71
Query: 99 NQLYPNFLLDKLLK-KTSARQ 118
+ L FL+ ++++ S+RQ
Sbjct: 72 SSLRSEFLVGEIVEIHKSSRQ 92
>gi|147902563|ref|NP_001085046.1| tripartite motif containing 39 [Xenopus laevis]
gi|47506875|gb|AAH70974.1| MGC78802 protein [Xenopus laevis]
Length = 461
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 51/279 (18%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHY 95
A+ + V+EL +++ CPIC+ E CGHSFC CI R + +CP C +
Sbjct: 2 AAANRNPVTELKEELTCPICLDHFSEPVSIECGHSFCRTCINRSWRGIHSYFECPQCRNV 61
Query: 96 LTNNQLYPNFLLDKLLKKTSARQISKTASPL-----ENFRQALQQGCGVSVKEIDSLMSL 150
L PN L++ +++ T SK SP+ E ++ ++ C V +EI L+
Sbjct: 62 SRWKFLRPNRLVENMVEITERLAASKI-SPVSKKQCEKHQEPMKLYCQVDGREI-CLVCR 119
Query: 151 LSEKKRK---MEQEEAERNMQI-LLDFLHCLR-------------KQKVDEL-KEIQ--- 189
S + R + EE+ R ++ L D L LR KQKV++L KEI+
Sbjct: 120 ESVEHRTHTVIPVEESTREFKVQLRDRLQTLRKEAATIIQTKSEDKQKVEKLQKEIEKKR 179
Query: 190 ----TDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSNTRKSWLSS--------- 236
++ ++E +N ER +DR+ V +++ +N + S L+
Sbjct: 180 RMLASEFEILREILNDRERE------LKDRFEVIEKLIIQRTNEKTSKLNEKLSSLQKLI 233
Query: 237 IDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHG 275
+D + + S + S+ G L D + Q SHG
Sbjct: 234 MDIEQNVLPPSQIYEEPKSAVGRLSQNLSDPQ-QKPSHG 271
>gi|440802816|gb|ELR23742.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 409
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLL 111
+ LCPIC I+ ++T CGH FC CI+ + K CPCC T QL N DK+L
Sbjct: 22 EFLCPICFSPIQNCYMTPCGHHFCEGCIMECVNRKHVCPCCNADATKAQLVRNHWFDKML 81
>gi|296083495|emb|CBI23464.3| unnamed protein product [Vitis vinifera]
Length = 828
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V EL ++ CP+C +++K+A LT+ C SFCY CI H+ +KS C C + + L P
Sbjct: 289 VGELPPELHCPLCKEVMKDAVLTSKCCFKSFCYKCIRDHIISKSMCVCGATNILADDLLP 348
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQ 134
N K L+ T R + S EN ALQ
Sbjct: 349 N----KTLRDTINRILESNNSSAENAGSALQ 375
>gi|359496488|ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
Length = 823
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V EL ++ CP+C +++K+A LT+ C SFCY CI H+ +KS C C + + L P
Sbjct: 284 VGELPPELHCPLCKEVMKDAVLTSKCCFKSFCYKCIRDHIISKSMCVCGATNILADDLLP 343
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQ 134
N K L+ T R + S EN ALQ
Sbjct: 344 N----KTLRDTINRILESNNSSAENAGSALQ 370
>gi|147792812|emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]
Length = 828
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V EL ++ CP+C +++K+A LT+ C SFCY CI H+ +KS C C + + L P
Sbjct: 289 VGELPPELHCPLCKEVMKDAVLTSKCCFKSFCYKCIRDHIISKSMCVCGATNILADDLLP 348
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQ 134
N K L+ T R + S EN ALQ
Sbjct: 349 N----KTLRDTINRILESNNSSAENAGSALQ 375
>gi|50290855|ref|XP_447860.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690846|sp|Q6FPI4.1|RAD18_CANGA RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|49527171|emb|CAG60809.1| unnamed protein product [Candida glabrata]
Length = 411
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
+ ELD + C IC +K LT CGH+FC +CI +L N+ CP C H L + L +
Sbjct: 18 LQELDDLLRCHICKDFLKNPVLTPCGHTFCSLCIRGYLSNEPKCPLCLHELRESMLRSEY 77
Query: 106 LLDKLLKK-TSARQ 118
L++++ + +ARQ
Sbjct: 78 LVNEITETYKAARQ 91
>gi|328868313|gb|EGG16691.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 1147
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 379 VSSIEFD-RDDQLFATAGVSRRIKVFDFASVVNEPAD--VHCPVVEMPTRSKLSCLSWNK 435
V +++F+ + L A+ G I V+D +N PA + P + P S + +SWNK
Sbjct: 125 VQALDFNPQQPNLIASGGPDSEIFVWD----LNNPASPSAYTPGTKPPQSSDCTSISWNK 180
Query: 436 FSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR--AWSVDFSRTEPSMLVSGSDD 490
++ IASS Y GI +VWD+ ++S++++ + +R S+ ++ TE + LV+ S+D
Sbjct: 181 KVQHIIASSFYNGITSVWDLKAKKSIIQFSDRTRRCKTRSILWNPTESTQLVTASED 237
>gi|405961802|gb|EKC27547.1| ADP-ribosylation factor [Crassostrea gigas]
Length = 1098
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 46 VSELDKDMLCPICMQIIKEAF-LTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
+ E+D + CPIC + A L C H+FC CI HL + + CP C H N L N
Sbjct: 177 MKEIDSLLRCPICYDFMHTAMILPECSHTFCSFCIRQHLSHTNQCPACNHGACENNLRNN 236
Query: 105 FLLDKLL 111
L+D L+
Sbjct: 237 RLVDDLI 243
>gi|401840891|gb|EJT43528.1| RAD18-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 489
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
+TS + +LD + C IC +K LT CGH+FC +CI HL N+ CP C +
Sbjct: 13 NTSIPNLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIREHLNNQPSCPLCLFEFRES 72
Query: 100 QLYPNFLLDKLLK 112
L FL++++++
Sbjct: 73 LLRSEFLVNEIIQ 85
>gi|242001834|ref|XP_002435560.1| gem-associated protein, putative [Ixodes scapularis]
gi|215498896|gb|EEC08390.1| gem-associated protein, putative [Ixodes scapularis]
Length = 1374
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 391 FATAGVSRRIKVFDFASVVNEPADVH---CPVVEMPTRS-KLSCLSWNKFSKNRIASSDY 446
A + + I ++D + + + ADV P +++ S K+ CL+W+ F +AS+ Y
Sbjct: 562 LACSSTNGTIFLYDLSKLASPSADVLRMLQPSLQLSGHSAKVVCLAWSPFRDGMLASASY 621
Query: 447 EGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ V VWDV + V Y H R +SV +S +P +L SG +D V
Sbjct: 622 DETVQVWDVAQGKPVANYRGHSGRVFSVCWSPLDPDVLFSGGEDATV 668
>gi|348676854|gb|EGZ16671.1| hypothetical protein PHYSODRAFT_345983 [Phytophthora sojae]
Length = 407
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 33 AAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLR-NKSDCP 90
A T A+T + V +L+ D+ CPIC+ IIKE + C H FC CI T +R +K +CP
Sbjct: 60 APVTDPAATKTLSVRQLNADLTCPICLGIIKETMVVMECLHRFCGDCISTAIRQSKRECP 119
Query: 91 CCG-HYLTNNQLYPNFLLDKLLKK 113
C H + L P+ D L+ K
Sbjct: 120 SCRIHIPSKRSLRPDPNFDALISK 143
>gi|351705363|gb|EHB08282.1| E3 ubiquitin-protein ligase TRIM50 [Heterocephalus glaber]
Length = 451
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL + CPIC+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QVSVPELQDQLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDSELRCPVCRQEVDGS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASPL--ENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ A ++ A P+ E+ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIE---ALRLPGGAEPMVCEHHRNPLSLFCEKDQELICGLCGLLG 115
>gi|366999470|ref|XP_003684471.1| hypothetical protein TPHA_0B03650 [Tetrapisispora phaffii CBS 4417]
gi|357522767|emb|CCE62037.1| hypothetical protein TPHA_0B03650 [Tetrapisispora phaffii CBS 4417]
Length = 1576
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 9 VVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLT 68
+V A+K D + T + Y + +T + + E +K CPIC+ +I +
Sbjct: 1226 IVRAIKNDNQYKINLKQIMTTGSRLKYLDSLTTLQESI-EQNKTFTCPICLGLIHTGSMI 1284
Query: 69 ACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
+CGH FC CI + L+ S+CP C T +QLY NF
Sbjct: 1285 SCGHFFCNNCIFSWLKLNSNCPLCKRDTTQSQLY-NF 1320
>gi|449474895|ref|XP_002194844.2| PREDICTED: gem-associated protein 5 [Taeniopygia guttata]
Length = 1500
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS------KLSCLSWNKFSKNRIAS 443
L A+ V+ I V + SVV ++ + E P R+ K++ LSW+ + R+ S
Sbjct: 605 LIASGSVNATIYVHNLKSVVENSSESPLTITE-PFRTLAGHTAKITSLSWSPHHEGRLVS 663
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ Y+G VWDV ++ + Y H+ R SV +S +P + +G+DD V
Sbjct: 664 ACYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDPDCVYTGADDFSV 713
>gi|45184872|ref|NP_982590.1| AAR049Cp [Ashbya gossypii ATCC 10895]
gi|74695775|sp|Q75EN0.1|RAD18_ASHGO RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|44980481|gb|AAS50414.1| AAR049Cp [Ashbya gossypii ATCC 10895]
gi|374105789|gb|AEY94700.1| FAAR049Cp [Ashbya gossypii FDAG1]
Length = 443
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
A T+ +++LD + C IC +++ LT CGH+FC +CI +L +S CP C L
Sbjct: 16 AGTTIPELADLDSLLRCHICKDMLQTPVLTQCGHTFCSLCIREYLNKESRCPLCLAELRQ 75
Query: 99 NQLYPNFLLDKL 110
N L FL+ +L
Sbjct: 76 NMLQKEFLVGEL 87
>gi|410080870|ref|XP_003958015.1| hypothetical protein KAFR_0F02840 [Kazachstania africana CBS 2517]
gi|372464602|emb|CCF58880.1| hypothetical protein KAFR_0F02840 [Kazachstania africana CBS 2517]
Length = 445
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
+S+LD + C IC +K LT CGH+FC +CI ++ +S CP C + L + L
Sbjct: 18 NISQLDALLRCHICKDFLKVPVLTPCGHTFCSICIREYINRQSKCPLCLNELRESMLRSE 77
Query: 105 FLLDKLLK 112
FL++++++
Sbjct: 78 FLVNEIVQ 85
>gi|270008553|gb|EFA05001.1| hypothetical protein TcasGA2_TC015080 [Tribolium castaneum]
Length = 334
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 31 AAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
A A A E +LD ++ C IC ++ +A C H+FC CI ++NKS+CP
Sbjct: 141 AEGAPPEAKPQPEPNSEDLDTELTCSICSELFIKAVTLNCSHTFCKFCIDRWMKNKSNCP 200
Query: 91 CCGHYLTNNQLYPNFLLDKLLKK 113
C +TN + P +LD ++K
Sbjct: 201 ICRKSITN--IAPTLVLDNFIEK 221
>gi|284009784|ref|NP_001165007.1| nuclear factor 7, brain [Xenopus (Silurana) tropicalis]
gi|183985957|gb|AAI66279.1| Unknown (protein for MGC:185544) [Xenopus (Silurana) tropicalis]
Length = 648
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 37 AAASTSEVGVS-ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD--CPCCG 93
A+ + S +G + + +++ CP+CM++ K+ + ACGH+FC CI +S CP C
Sbjct: 165 ASKNASTLGAAGDFAEELTCPLCMELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECK 224
Query: 94 HYLTNNQLYPNFLLDKLLKK----TSARQISKTASPLE 127
+T+ + N +L L+KK T + K PLE
Sbjct: 225 ESITDRKYTINRVLANLVKKAVCATPVTPVEKKTQPLE 262
>gi|444323545|ref|XP_004182413.1| hypothetical protein TBLA_0I02360 [Tetrapisispora blattae CBS 6284]
gi|387515460|emb|CCH62894.1| hypothetical protein TBLA_0I02360 [Tetrapisispora blattae CBS 6284]
Length = 644
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
+S+LD + C IC +K LT CGH+FC +CI +L + CP C + L + L
Sbjct: 18 NLSQLDSLLRCHICKDFLKIPVLTPCGHTFCSLCIRGYLNKEPKCPLCLNELRESMLRSE 77
Query: 105 FLLDKLLK 112
FL+ +L+K
Sbjct: 78 FLVSELVK 85
>gi|118344312|ref|NP_001071979.1| zinc finger protein [Ciona intestinalis]
gi|92081506|dbj|BAE93300.1| zinc finger protein [Ciona intestinalis]
Length = 579
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY--- 102
+ LD +CPIC+ +++ T CGH FC++CI+ +R+K+ CP L +NQL+
Sbjct: 37 IPSLDNKYMCPICLLALRDPVQTECGHRFCHLCILRCIRSKASCPVDQITLFSNQLFQDR 96
Query: 103 -------------PNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEID 145
PN D +++ R I + + R + GCG+ + E D
Sbjct: 97 SAHREVLDLKAKCPNIGCDLVVE---LRNIKNHIAKCPHRRTPCKNGCGLELLEQD 149
>gi|356545173|ref|XP_003541019.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like
[Glycine max]
Length = 756
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 352 LTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNE 411
L F YS+ LR+ D+ SAN++ + FDRD+ A GVS++IK+FD ++ ++
Sbjct: 37 LCKFAHYSKFEECGRLRNRDLLSSANVMCVLSFDRDEDHIAAGGVSKKIKIFDLNAISSD 96
Query: 412 PADVHCPVVEMPTR 425
D+ PV+ + R
Sbjct: 97 SVDIQYPVLVVQER 110
>gi|440896262|gb|ELR48242.1| Tripartite motif-containing protein 34, partial [Bos grunniens
mutus]
Length = 839
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 31 AAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-----LRN 85
A+ AA+ + V L +++ CPIC +++ E CGHSFC CI L
Sbjct: 343 ASGGSQGAAAMALNTVMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGG 402
Query: 86 KSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
S CP CG + L+PN L ++++ ++S
Sbjct: 403 DSSCPVCGTRYSLGNLWPNLHLANIVERLRKVKLS 437
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLR 84
A A A TS V V ++ ++ CPIC++++ E CGHSFC CI +
Sbjct: 16 AEARKVATMTSAVLV-DIQDEVTCPICLELLTEPLSIDCGHSFCQACITADNKESMPGQE 74
Query: 85 NKSDCPCC--GHYLTNNQLYPN 104
+S CP C ++L N L PN
Sbjct: 75 GQSRCPVCQTSYWLGN--LRPN 94
>gi|56805539|dbj|BAD83389.1| tripartite motif protein 31 isoform beta [Sus scrofa]
Length = 411
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LRNKSDCPCCGHYLTNNQLY 102
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + +
Sbjct: 7 TNKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIR 66
Query: 103 PNFLLDKLLKKTSA 116
PN+LL L++K A
Sbjct: 67 PNWLLVNLVEKIQA 80
>gi|73957766|ref|XP_546929.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Canis lupus
familiaris]
Length = 487
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C+++ HL ++ CP C + ++
Sbjct: 4 QVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELRCPVCQQEVDSS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ A Q P E+ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIE---ALQFPGDPEPKVCEHHRNPLSLFCERDQELICGLCGLLG 115
>gi|335291962|ref|XP_001928015.3| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Sus scrofa]
gi|211926941|dbj|BAG82682.1| tripartite motif-containing protein 31 [Sus scrofa]
Length = 576
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCII---THLRNKSDCPCCGHYLTNNQLYP 103
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + + P
Sbjct: 8 NKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRP 67
Query: 104 NFLLDKLLKKTSA 116
N+LL L++K A
Sbjct: 68 NWLLVNLVEKIQA 80
>gi|340723907|ref|XP_003400328.1| PREDICTED: hypothetical protein LOC100651499 [Bombus terrestris]
Length = 1412
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
E++ ++CP+C+ +I + C HSFC CI+ HL ++ CP C H L N+ PN
Sbjct: 12 EVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHLNREAHCPSCKHVL--NKAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|329755345|ref|NP_001193331.1| E3 ubiquitin-protein ligase TRIM31 [Sus scrofa]
Length = 576
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCII---THLRNKSDCPCCGHYLTNNQLYP 103
++L ++++CPICM I+++ CGHSFC CI+ L + CP C + + + P
Sbjct: 8 NKLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRP 67
Query: 104 NFLLDKLLKKTSA 116
N+LL L++K A
Sbjct: 68 NWLLVNLVEKIQA 80
>gi|345481546|ref|XP_001606737.2| PREDICTED: hypothetical protein LOC100123126 [Nasonia vitripennis]
Length = 838
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLL 111
M+C IC + I +T C H++C +CI +L K+ CP C H + LY N +D L+
Sbjct: 23 MICGICYEYIDTTVMTPCSHNYCSLCIRKYLHYKTQCPACFHNVFEKDLYINRAMDSLI 81
>gi|410083092|ref|XP_003959124.1| hypothetical protein KAFR_0I02090 [Kazachstania africana CBS 2517]
gi|372465714|emb|CCF59989.1| hypothetical protein KAFR_0I02090 [Kazachstania africana CBS 2517]
Length = 1466
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 9 VVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLT 68
++ ++K D + T + ++ Y S + + E +K CPIC+ I +
Sbjct: 1106 ILRSIKDDKQYKENLTKISQIESRIKYLKNLSKIQ-DLIEQNKSFNCPICLNTIYMGSII 1164
Query: 69 ACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
CGH FC CI + L+NKS CP C N+LY
Sbjct: 1165 KCGHFFCKHCIFSWLKNKSVCPICKKTTNKNELY 1198
>gi|327273676|ref|XP_003221606.1| PREDICTED: e3 ubiquitin-protein ligase LNX-like isoform 1 [Anolis
carolinensis]
Length = 734
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT-----NNQLY 102
++D D++C IC+Q + E T CGH+FC +C+ L + CP L + L
Sbjct: 38 DVDDDLICHICLQPLLEPLDTPCGHTFCTVCLTDFLVEQDFCPMDRKTLILQTCRKSSLL 97
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
N LLDKLL P N Q Q GC + S L E+KR+ +
Sbjct: 98 VNKLLDKLLVSCPFSDSCSEIVPRCNLEQHFQNGCKGA-----SHYGLTKERKRRSQDSS 152
Query: 163 AERNMQILLDFL 174
+ N + + L
Sbjct: 153 PDLNAALTIAAL 164
>gi|410914094|ref|XP_003970523.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 444
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 31 AAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR---NKS 87
A A A ST L +D+ C +C + +E + AC H FC +CI + R +
Sbjct: 6 APDAVPAGVSTPTFSKGSLREDLTCAVCCDLFREPVMLACMHHFCKLCICQYWRGTEGRV 65
Query: 88 DCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSL 147
CP C ++ N+L+ +++K ++ + S +EN+++ L++ ++
Sbjct: 66 RCPQCRKEFSSKHYQTNYLVSSIVEKI---RVVTSDSYIENYQKQLRELLESHHLRKEAF 122
Query: 148 MSLLSEKKRKME---------QEEAERNMQILLDFLH--------CLRKQKVDELKEIQT 190
+ +S K K++ Q E + + L LH L+K++V+EL+++Q
Sbjct: 123 IKSVSGDKDKIDAIKRAAADLQARIEGDFRALHQILHDEEARLLERLKKEQVEELEKVQR 182
Query: 191 DL 192
L
Sbjct: 183 HL 184
>gi|345570617|gb|EGX53438.1| hypothetical protein AOL_s00006g304 [Arthrobotrys oligospora ATCC
24927]
Length = 454
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 44/212 (20%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
G+ L+ + C +C ++ +T+CGH+FC +CI L S CP C +L N
Sbjct: 18 GLQALETSLRCQVCKELFTAPKVTSCGHTFCSLCIRRCLSASSKCPTCMKPDEEPRLRDN 77
Query: 105 FLLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
++ +L+ S R++L +D+L++ E+ RK +EEAE
Sbjct: 78 IVVSELV------------SSFNTIRKSL----------LDTLVA--KEEARKQAEEEAE 113
Query: 165 RNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLG 224
R+ + + K ++ D + ED V R + K R
Sbjct: 114 RDSRT---------RPKAEKRSSYDLDDDEVMEDAEPVHRPQ-----------AKKRRRQ 153
Query: 225 DDSNTRKSWLSSIDKNSSGIITSSLNARGGSS 256
D + RK + + S+ + N+R GSS
Sbjct: 154 DTTTLRKPQETEPPRRSTRTSSQRTNSRAGSS 185
>gi|113931534|ref|NP_001039216.1| tripartite motif containing 69 [Xenopus (Silurana) tropicalis]
gi|89272509|emb|CAJ82588.1| novel protein similar to zinc finger nuclear phosphoprotein (xnf7)
[Xenopus (Silurana) tropicalis]
Length = 637
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 8 PVVPAVK---PDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKE 64
P+ P K P+ +P P E+ A A +L +++ CP+C+++ KE
Sbjct: 132 PLSPKRKFEEPEPEPKKIKLEPPESPKNELPLAPAK-------DLAEELTCPLCLELFKE 184
Query: 65 AFLTACGHSFCYMCI--ITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
+ C H+FC CI +RN CP C L N L+KL+ KT +R
Sbjct: 185 PVMVECSHNFCKSCIENAWEVRNSVSCPECEEPLPEKSFIINRTLEKLVMKTLSR 239
>gi|145502955|ref|XP_001437455.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404605|emb|CAK70058.1| unnamed protein product [Paramecium tetraurelia]
Length = 247
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
+D++CPIC++I ++ T CGH+FC MCI L K++CP C
Sbjct: 59 EDLICPICLEIFQKVTTTQCGHAFCEMCIFDSLMRKAECPVC 100
>gi|145523776|ref|XP_001447721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415243|emb|CAK80324.1| unnamed protein product [Paramecium tetraurelia]
Length = 247
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
+D++CPIC++I ++ T CGH+FC MCI L K++CP C
Sbjct: 59 EDLICPICLEIFQKVTTTQCGHAFCEMCIFDSLMRKAECPVC 100
>gi|156551978|ref|XP_001602634.1| PREDICTED: hypothetical protein LOC100118736 [Nasonia vitripennis]
Length = 1304
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
E++ ++CP+C +I + C HSFC CI+ HL + CP C H L N PN
Sbjct: 12 EVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLNKNAQCPTCKHLL--NTAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|19075245|ref|NP_587745.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638645|sp|Q9P3U8.1|YJ95_SCHPO RecName: Full=Uncharacterized RING finger protein C548.05c
gi|8670896|emb|CAB94947.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 468
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+ K + CPIC + ++ F T CGH++CY C++ L+ CP C L Q P +L+
Sbjct: 79 IKKTLECPICTEALQRPFTTHCGHTYCYECLLNWLKESKSCPTCRQKLY-TQPSPAYLVY 137
Query: 109 KLLKKTSARQISKTASPL 126
+++ +A S + PL
Sbjct: 138 EIMNVVAA---SNSGFPL 152
>gi|291395916|ref|XP_002714371.1| PREDICTED: tripartite motif protein 31 [Oryctolagus cuniculus]
Length = 666
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGHYLTNNQLYPN 104
+L ++++CPIC++I++E T CGH+FC CI D CP C + N N
Sbjct: 9 DLQQEVICPICLEILQEPVTTDCGHNFCLQCITQVAEASGDFFKCPLCNSSVRKNAFTLN 68
Query: 105 FLLDKLLKKTSARQISK 121
+LL L+ + A +S+
Sbjct: 69 WLLVNLVDRIQAIDLSE 85
>gi|268575808|ref|XP_002642884.1| C. briggsae CBR-PAR-2 protein [Caenorhabditis briggsae]
Length = 549
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 24 TAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL 83
++P+ A TA + + +L D+LCP+C + + CGHS+C CI H
Sbjct: 19 SSPRLESNATTSTACINDVQPLRRDLSSDLLCPLCDHLFDRPVMVTCGHSYCEPCIERHT 78
Query: 84 RNKSDCPCCGHYLTNNQ-LYPNFLLDKLLKK 113
RN C C H + + + P+ LD +++K
Sbjct: 79 RNTRSCVICKHDVGPFEAMIPSITLDNMVRK 109
>gi|193652565|ref|XP_001945787.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 332
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-NKSDCPCCGHYLTNNQ- 100
EV + + KD++CPIC++++ + T C H FC CI+T LR CP C L + +
Sbjct: 36 EVPLESIHKDLMCPICLELLNKTMATKCLHRFCSECIVTALRAGNKKCPTCRKRLISKRC 95
Query: 101 LYPNFLLDKLLKK 113
L P+ +D L+ K
Sbjct: 96 LRPDHNIDLLISK 108
>gi|383857691|ref|XP_003704337.1| PREDICTED: uncharacterized protein LOC100877658 [Megachile
rotundata]
Length = 1539
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
E++ ++CP+C +I + C HSFC CI+ HL ++ CP C H L N+ PN
Sbjct: 12 EVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNTEAHCPSCKHVL--NKAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|348559168|ref|XP_003465388.1| PREDICTED: tripartite motif-containing protein 34-like [Cavia
porcellus]
Length = 578
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 28 ETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH---LR 84
+ +A A A+ T ++ L+K++ CPIC++++ E CGHS C C+ H
Sbjct: 88 QEEAQGAVIMASKT----LANLEKEVTCPICLELLTEPLSLGCGHSLCQACVTLHNEKTG 143
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
S CP CG L+PN L +++K ++S
Sbjct: 144 KDSGCPVCGIRDPRGNLWPNHHLADIVEKLREVKLS 179
>gi|225717742|gb|ACO14717.1| Postreplication repair E3 ubiquitin-protein ligase RAD18 [Caligus
clemensi]
Length = 350
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
L+ + C +C + I++ LT C HSFC +CI +L K CP C H L N L PN L
Sbjct: 17 LESILSCSVCYETIRDPVLTKCSHSFCSLCIRRYLLYKLQCPSCFHELHENDLIPNKPLR 76
Query: 109 KLLKKTSARQISKTASP 125
+L++ + +SP
Sbjct: 77 DILQQLAITLPKSDSSP 93
>gi|366988101|ref|XP_003673817.1| hypothetical protein NCAS_0A08780 [Naumovozyma castellii CBS 4309]
gi|342299680|emb|CCC67436.1| hypothetical protein NCAS_0A08780 [Naumovozyma castellii CBS 4309]
Length = 1502
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQ 60
+D V+ ++ AV + K + + T++ Y + + E +K C IC+Q
Sbjct: 1138 LDPVARNTILKAVNSNEKSRTIEKNINTTESRIKYLKGLQSLRESI-ENNKSFKCSICLQ 1196
Query: 61 IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
I + CGH FC CI + L+NK +CP C T +++Y NF
Sbjct: 1197 DISLGSMLKCGHFFCKRCITSWLKNKKNCPMCKMVTTASEIY-NF 1240
>gi|410984568|ref|XP_003998600.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Felis catus]
Length = 487
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C++ HL ++ CP C + ++
Sbjct: 4 QVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVNLSHHLDSELRCPVCRQEVDSS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ A Q+ P ++ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIE---ALQLPGDPEPKVCQHHRNPLSLFCERDQELICGLCGLLG 115
>gi|426244953|ref|XP_004016280.1| PREDICTED: tripartite motif-containing protein 34 [Ovis aries]
Length = 489
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCII------THLRNKSDCPCCGHYLTNNQLY 102
L K++ CPIC +++ E CGHSFC CI L S CP CG + L+
Sbjct: 9 LQKEVSCPICQELLTEPLSLGCGHSFCQTCITDSKETDISLEGDSSCPVCGARYSLGNLW 68
Query: 103 PNFLLDKLLKKTSARQIS 120
PN L ++++ ++S
Sbjct: 69 PNLHLANIVERLRTVKLS 86
>gi|301605556|ref|XP_002932422.1| PREDICTED: gem-associated protein 5-like [Xenopus (Silurana)
tropicalis]
Length = 1472
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS------KLSCLSWNKFSKNRIAS 443
L A+ + + V + + P D + E P R+ K++ LSW+ R+ S
Sbjct: 586 LLASGSNNATVYVHNLKGPLENPTDSPVTITE-PFRTLPGHTAKITSLSWSPHHDARLVS 644
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ Y+G VWDV ++ + Y H+ R SV +S EP + +G+DD
Sbjct: 645 ASYDGTAQVWDVLQEEPLSNYRGHKGRLLSVQWSPVEPDQVWTGADD 691
>gi|165970572|gb|AAI58468.1| Unknown (protein for MGC:186357) [Xenopus (Silurana) tropicalis]
Length = 608
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 37 AAASTSEVGVS-ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD--CPCCG 93
A+ + S +G + + +++ CP+C+++ K+ + ACGH+FC CI +S CP C
Sbjct: 125 ASKNASTLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECK 184
Query: 94 HYLTNNQLYPNFLLDKLLKK----TSARQISKTASPLE 127
+T+ + N +L L+KK T + K PLE
Sbjct: 185 ESITDRKYTINRVLANLVKKAVCATPVTPVEKKTQPLE 222
>gi|326432314|gb|EGD77884.1| hypothetical protein PTSG_09518 [Salpingoeca sp. ATCC 50818]
Length = 233
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL--- 106
D + C IC+ + + +T CGH FC+ C+ LR K DCP C +T + + P +
Sbjct: 79 DSEFSCNICLDAVSDPVVTRCGHLFCWPCLHEWLRRKPDCPVCKAGVTQDSVIPIYTASN 138
Query: 107 -LDKLLKKTSARQISKTASPLEN 128
D K+ R ++ A P++N
Sbjct: 139 KTDPRTKQHPPRPQAERAPPVQN 161
>gi|301101684|ref|XP_002899930.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102505|gb|EEY60557.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 33 AAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCP 90
A T +T + V +L+ D+ CPIC+ IIKE + C H FC CI T +R+ + +CP
Sbjct: 55 APVTDPNATRTLSVRQLNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRHSNRECP 114
Query: 91 CCG-HYLTNNQLYPNFLLDKLLKK 113
C H + L P+ D L++K
Sbjct: 115 SCRIHIPSKRSLRPDANFDALIRK 138
>gi|307208978|gb|EFN86178.1| Polycomb group protein Psc [Harpegnathos saltator]
Length = 1598
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
E++ ++CP+C +I + C HSFC CI+ HL + CP C H L N+ PN
Sbjct: 12 EVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLSKSAHCPSCKHAL--NKAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|395856231|ref|XP_003800534.1| PREDICTED: tripartite motif-containing protein 75-like [Otolemur
garnettii]
Length = 468
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI---ITHLRNKSDCPCC------GHY 95
V+ + CPIC+ +++ CGH+FC CI L++ CP C GH+
Sbjct: 6 AVAGFQAEAKCPICLDYLRDPVTIECGHNFCRSCIQQSWADLQDSFPCPVCRHQCQEGHF 65
Query: 96 LTNNQLYPNFLLDKLLKKTSARQISKTASPL-ENFRQALQQGCGVSVKEIDSLMSLLSEK 154
+N QL + KLL + + + +PL E Q L C + + SL + E
Sbjct: 66 RSNTQLGRMIEIAKLLHTPQSNKKRQEETPLCEKHSQVLNVFCEEDLAVLCSLCTEAPEH 125
Query: 155 K----RKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDL- 209
+ R +E E A + + L ++ L+KQ VD K I + E VE R +L
Sbjct: 126 QAHHVRPIE-EAASHHRRRLRSYMPSLKKQLVDLQKLISSQRKKPLELRAMVENQRQELS 184
Query: 210 --------YRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIIT 246
+ R++++V R+ ++ + ++ ++I + ++ + T
Sbjct: 185 SEFEHLNQFLEREQHAVFSRLAEEEEDIQQKLSANITEFTNYVAT 229
>gi|329664640|ref|NP_001193185.1| E3 ubiquitin-protein ligase TRIM50 [Bos taurus]
gi|296473068|tpg|DAA15183.1| TPA: tripartite motif protein 50A-like [Bos taurus]
Length = 487
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CP+C+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QVSVPELEDRLQCPMCLEVFKEPLMLQCGHSYCKGCLVSLSHHLASELRCPVCRQEVDYS 63
Query: 100 QLYPNFLLDKLLK 112
PN L K+++
Sbjct: 64 SSPPNVSLAKVIE 76
>gi|427788423|gb|JAA59663.1| Putative wd40 domain protein [Rhipicephalus pulchellus]
Length = 1394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 399 RIKVFDFASVVNEPADVH---CPVVEMPTRS-KLSCLSWNKFSKNRIASSDYEGIVTVWD 454
+I VFD + + +VH P ++ +S K+ L+W+ F +N +AS+ ++ V VWD
Sbjct: 582 KISVFDLSRLEKPNPNVHRILQPTLQFSGQSGKIVSLAWSPFRENLLASASFDQTVQVWD 641
Query: 455 VTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
V Q V Y+ H +R +SV +S + +L SG +D
Sbjct: 642 VDKAQLVATYQGHTRRLFSVCWSPVDSDVLFSGGED 677
>gi|440908450|gb|ELR58464.1| E3 ubiquitin-protein ligase TRIM50 [Bos grunniens mutus]
Length = 487
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CP+C+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QVSVPELEDRLQCPMCLEVFKEPLMLQCGHSYCKGCLVSLSHHLASELRCPVCRQEVDYS 63
Query: 100 QLYPNFLLDKLLK 112
PN L K+++
Sbjct: 64 SSPPNVSLAKVIE 76
>gi|147772009|emb|CAN60249.1| hypothetical protein VITISV_039399 [Vitis vinifera]
Length = 231
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 452 VWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDC 491
+WD +T + +Y EH+KRAWSVDFS +P+ SGSDDC
Sbjct: 2 MWDASTGEGFSQYTEHQKRAWSVDFSPVDPTKFASGSDDC 41
>gi|284447304|ref|NP_001079694.2| nuclear factor 7, ovary [Xenopus laevis]
gi|52783144|sp|Q91431.1|NF7O_XENLA RecName: Full=Nuclear factor 7, ovary; Short=xNF7-O
gi|1311667|gb|AAB35876.1| nuclear factor 7 [Xenopus laevis]
Length = 610
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 14 KPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHS 73
+P+ +P ++ AA AA + +++ CP+C+++ K+ + ACGH+
Sbjct: 112 EPEPEPKKAKVEDKDASKTAASLGAAG-------DFAEELTCPLCVELFKDPVMVACGHN 164
Query: 74 FCYMCIITHLRNKSD--CPCCGHYLTNNQLYPNFLLDKLLKK---TSARQISKTASPLE 127
FC CI +S CP C +T+ + N +L L KK T + K PLE
Sbjct: 165 FCRSCIDKVWEGQSSFACPECKESITDRKYTINRVLANLAKKAACTPVTPVEKKTRPLE 223
>gi|156084216|ref|XP_001609591.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796843|gb|EDO06023.1| hypothetical protein BBOV_II000630 [Babesia bovis]
Length = 344
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKL 110
KD CP+C +++ + T+CGH+FC CI + CP C L+ +Q PN LL +L
Sbjct: 5 KDFECPVCFKLLYKPVTTSCGHNFCKTCIDQAAAYRLACPLCRQRLS-SQYSPNILLFQL 63
Query: 111 LKKTSARQISKTASPL 126
L +T A ++ + A L
Sbjct: 64 LNETFADEMRERAEEL 79
>gi|62529026|gb|AAX84808.1| TRIM50 [Pan troglodytes]
Length = 102
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSYHLDAELRCPVCWQVVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|449492947|ref|XP_004159149.1| PREDICTED: uncharacterized protein LOC101225295 [Cucumis sativus]
Length = 381
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAAST---SEVGVSELDKDMLCPI 57
+D TEP V P +P S + +++D+ A AS+ S + + +L +++ C I
Sbjct: 94 LDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLPLDKLREELSCAI 153
Query: 58 CMQIIKEAFLTACGHSFCYMCIITHLRNKSD-----CPCCGHYLTNNQ 100
C++I E T CGHSFC C LR+ +D CP C ++N +
Sbjct: 154 CLEICFEPSTTPCGHSFCKKC----LRSAADKCGKRCPKCRQLISNGR 197
>gi|171846709|gb|AAI61790.1| Unknown (protein for IMAGE:8960373) [Xenopus (Silurana) tropicalis]
Length = 536
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 37 AAASTSEVGVS-ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD--CPCCG 93
A+ + S +G + + +++ CP+C+++ K+ + ACGH+FC CI +S CP C
Sbjct: 53 ASKNASTLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECK 112
Query: 94 HYLTNNQLYPNFLLDKLLKK----TSARQISKTASPLE 127
+T+ + N +L L+KK T + K PLE
Sbjct: 113 ESITDRKYTINRVLANLVKKAVCATPVTPVEKKTQPLE 150
>gi|365990045|ref|XP_003671852.1| hypothetical protein NDAI_0I00400 [Naumovozyma dairenensis CBS 421]
gi|343770626|emb|CCD26609.1| hypothetical protein NDAI_0I00400 [Naumovozyma dairenensis CBS 421]
Length = 481
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY 95
T A+T ++LD + C IC +K LT CGH+FC +CI +L++ S CP C
Sbjct: 9 TDFANTKLPDFAQLDFLLRCHICKDFLKTPVLTPCGHTFCSVCIREYLQSNSKCPLCLLE 68
Query: 96 LTNNQLYPNFLLDKLLK 112
L + L FL++ +++
Sbjct: 69 LRESMLRSEFLVNGIVQ 85
>gi|301617127|ref|XP_002937994.1| PREDICTED: nuclear factor 7, ovary-like [Xenopus (Silurana)
tropicalis]
Length = 644
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 16 DMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFC 75
+ +P + T + TDAA S + +++ C +C+++ K+ + CGH+FC
Sbjct: 146 EQEPETKKTKVEVTDAAPNSALVGSAGDFA-----EELTCRLCVELFKDPVMVECGHNFC 200
Query: 76 YMCIITHL--RNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR---QISKTASPLEN 128
CI R+ CP C + + + N L L+KKT+A + K PLEN
Sbjct: 201 KACIEKAWAGRDSFSCPECKEVINDKKYTINRALANLVKKTAAAPVISVEKKEKPLEN 258
>gi|348507571|ref|XP_003441329.1| PREDICTED: E3 ubiquitin-protein ligase RAD18-like [Oreochromis
niloticus]
Length = 497
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+D + CPIC + + +T C H+FC +CI L K CP C +T L N LLD
Sbjct: 19 VDALLRCPICFDFLNISMMTKCSHNFCSLCIRKFLSYKLQCPVCNTQMTEADLRNNRLLD 78
Query: 109 KLLKK-TSARQ 118
L+ SARQ
Sbjct: 79 DLVTNFQSARQ 89
>gi|47523460|ref|NP_999351.1| E3 ubiquitin-protein ligase TRIM50 [Sus scrofa]
gi|56404687|sp|Q865W2.1|TRI50_PIG RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465654|gb|AAL91074.1| tripartite motif protein 50 [Sus scrofa]
Length = 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CP+C+++ KE + CGHS+C C+++ HL ++ CP C + ++
Sbjct: 4 QVSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|431898169|gb|ELK06864.1| E3 ubiquitin-protein ligase TRIM50 [Pteropus alecto]
Length = 487
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ +E + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QVRVPELEDRLQCPICLEVFREPLMLQCGHSYCKGCLVSLSHHLDSELRCPVCRQEVDGS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP 125
PN L ++++ A Q+ + P
Sbjct: 64 SSPPNVSLARVIE---ALQLPRDPEP 86
>gi|260830174|ref|XP_002610036.1| hypothetical protein BRAFLDRAFT_237984 [Branchiostoma floridae]
gi|229295399|gb|EEN66046.1| hypothetical protein BRAFLDRAFT_237984 [Branchiostoma floridae]
Length = 532
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYPN 104
VS LD CP+C+ I++E T CGH +C CI LR S CP G LT ++++P+
Sbjct: 8 VSPLDDRYRCPVCILILREPRQTGCGHRYCNYCITLKLREPSPKCPIDGEELTQDEVFPD 67
Query: 105 FLLDK--LLKKTSAR 117
+ L+ K R
Sbjct: 68 LFCKREILMSKVYCR 82
>gi|366993262|ref|XP_003676396.1| hypothetical protein NCAS_0D04540 [Naumovozyma castellii CBS 4309]
gi|342302262|emb|CCC70035.1| hypothetical protein NCAS_0D04540 [Naumovozyma castellii CBS 4309]
Length = 469
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
+ E+D + C IC +K LT C H+FC +CI +L++ S CP C + L + L F
Sbjct: 19 LQEIDTLLRCHICKDFLKVPVLTPCSHTFCSLCIREYLKDNSKCPLCLNELRESMLRSEF 78
Query: 106 LLDKLLK 112
L++++++
Sbjct: 79 LVNEIVQ 85
>gi|183396403|gb|ACC62085.1| tripartite motif-containing 6 and tripartite motif-containing 34
(predicted) [Rhinolophus ferrumequinum]
Length = 809
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH--- 82
PQE+ A AA + V+ + +DM CPIC++++ E CGHSFC CI +
Sbjct: 318 PQESGQEEARGGAAGVLKFLVN-IQEDMTCPICLELLTEPLSLDCGHSFCQTCITDNKES 376
Query: 83 ---LRNKSDCPCCGHYLTNNQLYPN 104
R ++ CP CG + L+ N
Sbjct: 377 EIGPRGENRCPVCGIKYSLRNLWLN 401
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
++ ++ CPIC++++ E CGHSFC CI + +S CP C
Sbjct: 8 DIQDEVTCPICLELLTEPLSIDCGHSFCQACITENSQESVIGQEGESSCPVCQTSYQLRN 67
Query: 101 LYPNFLLDKLLKKT------SARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEK 154
L PN L + ++ S +Q+ T + R+ LQ C KE L+ L E+
Sbjct: 68 LRPNRHLANIAERLREVVLGSGKQL--TVILCAHHREKLQLFC----KEDGKLICWLCER 121
Query: 155 KRK-------MEQEEAERNMQILLDFLHCLR--KQKVDELKEIQTDLHYIKEDINAVERH 205
++ + +E A+ + + L LR +Q+ ++LK + T+ + ERH
Sbjct: 122 SQEHRGHHTFLMEEVAQEYQEKFQESLKRLRQEQQEAEKLKAVITEKRTHWKSQMEPERH 181
Query: 206 RI 207
RI
Sbjct: 182 RI 183
>gi|161611711|gb|AAI55883.1| Xnf7 protein [Xenopus laevis]
Length = 609
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 37 AAASTSEVGVS-ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD--CPCCG 93
A+ + S +G + + +++ CP+C+++ K+ + ACGH+FC CI +S CP C
Sbjct: 126 ASKNASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECK 185
Query: 94 HYLTNNQLYPNFLLDKLLKK---TSARQISKTASPLE 127
+T+ + N +L L KK T + K PLE
Sbjct: 186 ESITDRKYTINRVLANLAKKAACTPVTPVEKKTRPLE 222
>gi|62529024|gb|AAX84807.1| TRIM50 [Pan troglodytes]
Length = 102
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSYHLDAELRCPMCWQVVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|358418416|ref|XP_595840.6| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Bos taurus]
gi|359078714|ref|XP_002697406.2| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Bos taurus]
Length = 574
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQLY 102
+L ++M+CPIC+ I+++ CGH+FC C IT +D CP C + + +
Sbjct: 8 GKLQEEMICPICLDILQDPATIDCGHNFCLSC-ITQSGEAADSVLKCPLCNKIVKRDTIT 66
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFR 130
PN+LL L++K A S E R
Sbjct: 67 PNWLLVNLVEKIQAMDPSDMQPETEELR 94
>gi|296474320|tpg|DAA16435.1| TPA: tripartite motif-containing protein 31-like [Bos taurus]
Length = 574
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQLY 102
+L ++M+CPIC+ I+++ CGH+FC C IT +D CP C + + +
Sbjct: 8 GKLQEEMICPICLDILQDPATIDCGHNFCLSC-ITQSGEAADSVLKCPLCNKIVKRDTIT 66
Query: 103 PNFLLDKLLKKTSARQISKTASPLENFR 130
PN+LL L++K A S E R
Sbjct: 67 PNWLLVNLVEKIQAMDPSDMQPETEELR 94
>gi|363749623|ref|XP_003645029.1| hypothetical protein Ecym_2490 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888662|gb|AET38212.1| Hypothetical protein Ecym_2490 [Eremothecium cymbalariae
DBVPG#7215]
Length = 465
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
++++D + C IC + ++ L CGH+FC +CI T+L ++ CP C L N L F
Sbjct: 24 IADIDSLLRCHICKEFLQTPVLGHCGHTFCSLCIRTYLNKEARCPLCLVELRQNMLQKEF 83
Query: 106 LLDKLL 111
LL +++
Sbjct: 84 LLGEIV 89
>gi|344289749|ref|XP_003416603.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like [Loxodonta
africana]
Length = 487
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C+++ HL CP C + ++
Sbjct: 4 QVSVPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSRHLDADLRCPVCRQAVDSS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSSPNVSLARVIE 76
>gi|449276529|gb|EMC85001.1| E3 ubiquitin-protein ligase TRIM50 [Columba livia]
Length = 495
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
+ ++EL+ +LCPIC+++ KE + CGHS+C C+++ L + CP C + +
Sbjct: 5 MSINELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSRELDGRFLCPVCRQSVDCSA 64
Query: 101 LYPNFLLDKLLKKTSAR 117
PN L ++++ +R
Sbjct: 65 SPPNVTLARVIEVLQSR 81
>gi|149756002|ref|XP_001504541.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Equus caballus]
Length = 487
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QVSVPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSRHLDSELRCPVCRQEVDCS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|301776204|ref|XP_002923519.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Ailuropoda
melanoleuca]
Length = 487
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C+++ H ++ CP C + ++
Sbjct: 4 QVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHPDSELRCPVCRQEVDSS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ A Q P E+ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIE---ALQFPGDPEPKVCEHHRNPLSLFCERDQELICGLCGLLG 115
>gi|348568674|ref|XP_003470123.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like [Cavia
porcellus]
Length = 490
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+ V EL + CPIC+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QASVPELQDQLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDSELRCPVCRQEVDGS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ P E+ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIEALRLPGAPGAMEPAVCEHHRNPLSLFCEKDQELICGLCGLLG 118
>gi|147902700|ref|NP_001081473.1| nuclear factor 7, brain [Xenopus laevis]
gi|52783145|sp|Q92021.1|NF7B_XENLA RecName: Full=Nuclear factor 7, brain; Short=xNF7; Short=xNF7-B
gi|214915|gb|AAA49995.1| xnf7 [Xenopus laevis]
gi|238611|gb|AAB20269.1| zinc finger nuclear phosphoprotein [Xenopus laevis]
Length = 609
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 37 AAASTSEVGVS-ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD--CPCCG 93
A+ + S +G + + +++ CP+C+++ K+ + ACGH+FC CI +S CP C
Sbjct: 126 ASKNASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECR 185
Query: 94 HYLTNNQLYPNFLLDKLLKK---TSARQISKTASPLE 127
+T+ + N +L L KK T + K PLE
Sbjct: 186 ESITDRKYTINRVLANLAKKAACTPVTPVEKKTRPLE 222
>gi|65285121|ref|NP_944606.2| tripartite motif-containing protein 73 [Homo sapiens]
gi|56404880|sp|Q86UV7.1|TRI73_HUMAN RecName: Full=Tripartite motif-containing protein 73; AltName:
Full=Tripartite motif-containing protein 50B
gi|30315005|gb|AAP30735.1| tripartite motif protein TRIM50B [Homo sapiens]
gi|157170278|gb|AAI52801.1| Tripartite motif-containing 73 [synthetic construct]
gi|162317766|gb|AAI56767.1| Tripartite motif-containing 73 [synthetic construct]
gi|261860870|dbj|BAI46957.1| tripartite motif-containing protein 73 [synthetic construct]
Length = 250
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 4 QVSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGS 63
Query: 100 QLYPNFLL 107
PN L
Sbjct: 64 SSLPNVSL 71
>gi|115313716|gb|AAI23924.1| novel protein similar to zinc finger nuclear phosphoprotein (xnf7)
[Xenopus (Silurana) tropicalis]
Length = 637
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 8 PVVPAVK---PDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKE 64
P+ P K P+ +P P E+ A A +L +++ CP+C+++ KE
Sbjct: 132 PLSPKRKFEEPEPEPKKIKLEPPESPKNELPLAPAK-------DLAEELTCPLCLELFKE 184
Query: 65 AFLTACGHSFCYMCI--ITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
+ C H+FC CI ++N CP C L N L+KL+ KT +R
Sbjct: 185 PVMVECSHNFCKSCIENAWEVQNSVSCPECEEPLPEKSFIINRTLEKLVMKTLSR 239
>gi|302143897|emb|CBI22758.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 375 SANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVV---NEPADVHCPVVEMPTRSKLSCL 431
S + + IEFD D L AT G++R+I+V+ N+ D + + T +KLS L
Sbjct: 54 STDTIGVIEFDPSDNLVATGGIARKIRVYSRKVTWLQHNDACDYY-----VCTPAKLSSL 108
Query: 432 SWNKFSKNRI-ASSDYEGIVTVWDVTTQQSVMEYEEHEK----RAWSVDFSR 478
W S R+ S DY+G+VT +D+ + + E +EH R WS+ +R
Sbjct: 109 RWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGTDGCLRLWSMHDAR 160
>gi|403418356|emb|CCM05056.1| predicted protein [Fibroporia radiculosa]
Length = 423
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
S S G+ +LD+ + C IC ++ CGH +C +CI + L K +CP C + +
Sbjct: 24 SDSAPGLRQLDEALRCSICRELYAAPMTLNCGHCYCSLCIRSVLNEKQECPACRKFASEE 83
Query: 100 QLYPNFLLDKLLK 112
L N ++ +K
Sbjct: 84 HLRKNVAMESAVK 96
>gi|126631290|gb|AAI33209.1| Xnf7 protein [Xenopus laevis]
Length = 588
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 37 AAASTSEVGVS-ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD--CPCCG 93
A+ + S +G + + +++ CP+C+++ K+ + ACGH+FC CI +S CP C
Sbjct: 105 ASKNASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECR 164
Query: 94 HYLTNNQLYPNFLLDKLLKK---TSARQISKTASPLE 127
+T+ + N +L L KK T + K PLE
Sbjct: 165 ESITDRKYTINRVLANLAKKAACTPVTPVEKKTRPLE 201
>gi|397641590|gb|EJK74739.1| hypothetical protein THAOC_03567 [Thalassiosira oceanica]
Length = 452
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 43/254 (16%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP-NFLL 107
L D LC ICM I + F+T+C H FC CI L+ CP C + Q+ P N L
Sbjct: 137 LPADFLCSICMNIQLDPFITSCDHCFCGDCIKQALQASELCPVCRTPQSAQQIKPINGCL 196
Query: 108 DKLLKKTSAR------------QISKTASPLENFRQALQQGCGVSV--KEIDSLMSLLSE 153
++ R I+ + + + A G S +E++ L +
Sbjct: 197 KRVYSTIEVRCCNHKDGCLWKGSIADFVAHTDTCQTARTSSLGSSALREEVNRLNKENKQ 256
Query: 154 KKRKMEQEEAERN-MQILLDFLHC------------LRKQKVDELKEIQTDLHYIKEDIN 200
+ ++ EA R+ ++ +DFL R VDEL ++ + Y E
Sbjct: 257 LQNRLMTVEATRDQLEEEIDFLRAHVIPKFNGDYLQFRSDNVDELSKLIANNLY--ECPV 314
Query: 201 AVERHRI-DLYRAR-----------DRYSVKLRMLGDDS-NTRKSWLSSIDKNSSGIITS 247
V+R+RI ++ RAR D Y + +RML + S ++S+ +G+ +S
Sbjct: 315 EVDRNRIYNVVRARYNDLKRPTSEPDEYWIDMRMLLSLALRVTGSRIASMTTCPTGMTSS 374
Query: 248 SLNARGGSSAGSLQ 261
SL R S+ G+++
Sbjct: 375 SLVPRITSTIGTMR 388
>gi|85567227|gb|AAI12155.1| Tripartite motif protein 50A [Homo sapiens]
gi|85567586|gb|AAI12153.1| Tripartite motif protein 50A [Homo sapiens]
gi|119590094|gb|EAW69688.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|119590097|gb|EAW69691.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|158257580|dbj|BAF84763.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSLPNVSLARVIE 76
>gi|384248823|gb|EIE22306.1| hypothetical protein COCSUDRAFT_66556 [Coccomyxa subellipsoidea
C-169]
Length = 1770
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 17 MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCY 76
+ S A + DAA + A ++ +E D+ CPIC+ + + +T+CGH FC
Sbjct: 1480 LDASKEHPAILDADAAGPSSGAGPSTGPAEAEADEIGSCPICLDVCERRTVTSCGHHFCS 1539
Query: 77 MCIITHLRNKSDCPCCGHYLTNNQLY 102
CI + N+++CP C L LY
Sbjct: 1540 DCIHESVHNRAECPICRAPLRPEDLY 1565
>gi|328777335|ref|XP_393893.4| PREDICTED: hypothetical protein LOC410413 [Apis mellifera]
Length = 1024
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
E++ ++CP+C +I + C HSFC CI+ HL ++ CP C H L N+ PN
Sbjct: 12 EVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNTEAHCPSCKHVL--NKAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|444720557|gb|ELW61339.1| E3 ubiquitin-protein ligase TRIM50 [Tupaia chinensis]
Length = 486
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL + CPIC+++ KE + CGHS+C C+++ HL ++ CP C + +
Sbjct: 4 QVSMPELQDQLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDSELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|22122567|ref|NP_666189.1| E3 ubiquitin-protein ligase TRIM31 [Mus musculus]
gi|81901365|sp|Q8R0K2.1|TRI31_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|20071873|gb|AAH26666.1| Tripartite motif-containing 31 [Mus musculus]
gi|26329337|dbj|BAC28407.1| unnamed protein product [Mus musculus]
gi|148691362|gb|EDL23309.1| tripartite motif-containing 31 [Mus musculus]
Length = 507
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI--ITHLRNKSDCPCCGHYLTNNQLYPNF 105
+L +++ CPICM+I+++ CGH+FC CI + K CP C + N PN
Sbjct: 9 QLQEEVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTSEKIQCPLCKLSVNKNTFRPNK 68
Query: 106 LLDKLLKK 113
LL L +K
Sbjct: 69 LLASLAEK 76
>gi|119590095|gb|EAW69689.1| hCG1642804, isoform CRA_c [Homo sapiens]
gi|219517998|gb|AAI43788.1| TRIM50 protein [Homo sapiens]
Length = 486
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSLPNVSLARVIE 76
>gi|255710917|ref|XP_002551742.1| KLTH0A06556p [Lachancea thermotolerans]
gi|238933119|emb|CAR21300.1| KLTH0A06556p [Lachancea thermotolerans CBS 6340]
Length = 460
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
+LD + C IC IK LT CGH+FC +CI +L + CP C L + L FL+
Sbjct: 30 DLDTLLRCHICKGFIKTPVLTPCGHTFCSLCIREYLNRELKCPLCLAELRESMLRSEFLV 89
Query: 108 DKLL 111
++++
Sbjct: 90 NEII 93
>gi|21707222|gb|AAH33871.1| TRIM74 protein [Homo sapiens]
gi|123979822|gb|ABM81740.1| tripartite motif-containing 74 [synthetic construct]
gi|123994589|gb|ABM84896.1| tripartite motif-containing 74 [synthetic construct]
Length = 249
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 4 QVSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGS 63
Query: 100 QLYPNFLL 107
PN L
Sbjct: 64 SSLPNVSL 71
>gi|393220636|gb|EJD06122.1| hypothetical protein FOMMEDRAFT_166391 [Fomitiporia mediterranea
MF3/22]
Length = 466
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 9 VVPAVKPDMK--PSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAF 66
V A K M+ P TD P E DA G+ +LD C IC ++
Sbjct: 44 VTAACKGHMEDVPDPTDFPP-EADAP------------GLQKLDSAFSCRICGEMYDAPM 90
Query: 67 LTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKL 110
+ CGHSFC MC+ LR++ +CP C QL N L+ L
Sbjct: 91 MLGCGHSFCSMCVRRSLRDRHECPTCRVPAEEVQLVKNAQLEDL 134
>gi|426250664|ref|XP_004019054.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Ovis aries]
Length = 574
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQL 101
S+L ++++CPICM I++ CGH+FC C IT D CP C + + +
Sbjct: 7 TSKLQEEVICPICMDILQHPATIDCGHNFCLSC-ITQSGEAEDSVLKCPLCNKIVRRDTI 65
Query: 102 YPNFLLDKLLKKTSARQISKTASPLENFR 130
PN+LL L++K + + S+ E R
Sbjct: 66 TPNWLLVNLVEKIQSMEPSEMQPETEELR 94
>gi|157777585|gb|ABV69911.1| TRIM22 [Chlorocebus aethiops]
Length = 498
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTMSRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|403285740|ref|XP_003934169.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Saimiri boliviensis
boliviensis]
Length = 487
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKSCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ A ++ P E+ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIE---ALRLPGDPEPKVCEHHRNPLSLFCEKDQELICGLCGLLG 115
>gi|301781422|ref|XP_002926141.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
6-like [Ailuropoda melanoleuca]
Length = 666
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 86/228 (37%), Gaps = 44/228 (19%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLR 84
A A T A TS V V ++ ++ CPIC++++ E CGHSFC CI +T
Sbjct: 172 AGARTEATMTSAVLV-DIRDEVTCPICLELLTEPLSIDCGHSFCQACISRNSAESVTGQE 230
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQAL----------- 133
+ CP C L PN + L + R P + L
Sbjct: 231 GEGSCPVCQTSYQPGDLRPN----RHLANIAERLREVVLGPGMQLKAVLCAHHGEKLRLF 286
Query: 134 ---------------QQGCGVSVKEIDSLMSLLSEK------KRKMEQEEAERNMQILLD 172
Q+ CG ++ + EK K + EQ+EAER +++
Sbjct: 287 CKEDGQLICWLCERSQEHCGHHTVLMEEVAHEYQEKFQESLRKLRQEQQEAERLTAVIIG 346
Query: 173 FLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKL 220
+ Q E IQT+ + ++ ++ ER ++ +R + +
Sbjct: 347 KRTSWKNQMEPERHRIQTEFNKLRRILDKEERRQLKKLEEEERKGLSI 394
>gi|157777559|gb|ABV69898.1| TRIM22 [Erythrocebus patas]
Length = 498
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTMSRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|327266658|ref|XP_003218121.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 475
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK-SDCPCCGHYLTNNQLYPN 104
V EL +++ CPIC++ K+ ACGH+FC C+ + + K + CP C + + PN
Sbjct: 7 VKELREELACPICLEFFKKPVSIACGHNFCQSCLDQYRKEKEASCPQCRKEVLKEDIRPN 66
Query: 105 FLLDKLLK 112
+ L L+K
Sbjct: 67 WQLMNLVK 74
>gi|62529017|gb|AAX84804.1| TRIM50 [Pongo pygmaeus]
Length = 102
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCREAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|145513879|ref|XP_001442850.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410211|emb|CAK75453.1| unnamed protein product [Paramecium tetraurelia]
Length = 292
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 43 EVGVSELDK-----DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
++G+ ELD+ ++ C IC ++ LT CGHSFCY+CI HL CP C
Sbjct: 45 KLGIFELDRKFKEENLRCIICQDYFQKFTLTFCGHSFCYLCIFEHLLKSHKCPSC 99
>gi|38524612|ref|NP_942150.1| tripartite motif-containing protein 74 [Homo sapiens]
gi|56404879|sp|Q86UV6.1|TRI74_HUMAN RecName: Full=Tripartite motif-containing protein 74; AltName:
Full=Tripartite motif-containing protein 50C
gi|30315007|gb|AAP30736.1| tripartite motif protein TRIM50C [Homo sapiens]
Length = 250
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE+ + CGHS+C C+++ HL K CP C + +
Sbjct: 4 QVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGS 63
Query: 100 QLYPNFLL 107
PN L
Sbjct: 64 SSLPNVSL 71
>gi|50543428|ref|XP_499880.1| YALI0A08580p [Yarrowia lipolytica]
gi|74689915|sp|Q6CHI1.1|RAD18_YARLI RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|49645745|emb|CAG83807.1| YALI0A08580p [Yarrowia lipolytica CLIB122]
Length = 344
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYP 103
G+ ++D+ + C IC + +T CGH+FC +CI +L N S CP C +QL
Sbjct: 18 GLKDVDETLRCHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTCMQEQQISQLRK 77
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQQ 135
N ++ L++ SA++ A+ L ++A +Q
Sbjct: 78 NVTVETLVEHFSAQR----ATILRVVKEAAKQ 105
>gi|84996901|ref|XP_953172.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304168|emb|CAI76547.1| hypothetical protein, conserved [Theileria annulata]
Length = 359
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 51 KDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKL 110
KD CPIC I+ + T+CGH+FC CI + + +CP C LT Q PN LL +L
Sbjct: 5 KDFECPICFNILYKPVTTSCGHNFCKFCIDQAIDSSPNCPLCRVPLT-TQYSPNILLTQL 63
Query: 111 LKK 113
+ +
Sbjct: 64 INE 66
>gi|380012175|ref|XP_003690162.1| PREDICTED: uncharacterized protein LOC100863555 [Apis florea]
Length = 1019
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
E++ ++CP+C +I + C HSFC CI+ HL ++ CP C H L N+ PN
Sbjct: 12 EVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNTEAHCPSCKHVL--NKAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|159164697|pdb|2JMD|A Chain A, Solution Structure Of The Ring Domain Of Human Traf6
Length = 63
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYPN 104
CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P+
Sbjct: 9 CPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 59
>gi|114606233|ref|XP_001148040.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 1 [Pan
troglodytes]
Length = 474
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|296192250|ref|XP_002743978.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Callithrix jacchus]
Length = 487
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKSCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSLPNVSLARVIE 76
>gi|428175777|gb|EKX44665.1| hypothetical protein GUITHDRAFT_109441 [Guillardia theta CCMP2712]
Length = 364
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 49 LDKDMLCPICMQII-KEAFLTACGHSFCYMCIITHLRN------KSDCPCCGHYLTNNQL 101
+ D+ CPIC+ ++ + LT CGH+FC++CI T++ CP C +T
Sbjct: 61 FENDLTCPICLDLVARPVTLTECGHTFCFLCIRTNISTVQQQHLVPSCPNCRKNITTAPS 120
Query: 102 YPNFLLDKLLKK-TSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
PN +++K +K ++ S+ A + +A Q+ + +E D L S KM+Q
Sbjct: 121 APNLMIEKCVKTLIGSKPQSEQAELMNKLNEAAQRADRIMRQE-DDLWSCF-----KMQQ 174
Query: 161 E 161
E
Sbjct: 175 E 175
>gi|350426618|ref|XP_003494492.1| PREDICTED: hypothetical protein LOC100746715 [Bombus impatiens]
Length = 1821
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 48 ELDKDMLCPICMQ-IIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
+++ ++CP+C+ +I + C HSFC CI+ HL ++ CP C H L N+ PN
Sbjct: 12 DVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHLNREAYCPSCKHVL--NKAKPNIK 69
Query: 107 LDKLLK 112
DK L+
Sbjct: 70 ADKALQ 75
>gi|62529020|gb|AAX84805.1| TRIM50 [Gorilla gorilla]
Length = 102
Score = 55.5 bits (132), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLLELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|332255052|ref|XP_003276649.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 1 [Nomascus
leucogenys]
gi|332255054|ref|XP_003276650.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 2 [Nomascus
leucogenys]
Length = 487
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|20386036|gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyostelium discoideum]
Length = 577
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%)
Query: 38 AASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT 97
A T G + K++ CPIC + K T CGH FC CI+ L+ K CP C L
Sbjct: 495 AIDTQSNGGDKKSKNLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLH 554
Query: 98 NNQLYPNFLLDKL 110
L F+ + L
Sbjct: 555 GKNLIILFIFNNL 567
>gi|164607189|ref|NP_001106867.1| E3 ubiquitin-protein ligase TRIM22 [Pan troglodytes]
gi|157777565|gb|ABV69901.1| TRIM22 [Pan troglodytes]
gi|410220026|gb|JAA07232.1| tripartite motif containing 22 [Pan troglodytes]
gi|410261600|gb|JAA18766.1| tripartite motif containing 22 [Pan troglodytes]
gi|410296752|gb|JAA26976.1| tripartite motif containing 22 [Pan troglodytes]
Length = 498
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI T + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITTKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|254581628|ref|XP_002496799.1| ZYRO0D08404p [Zygosaccharomyces rouxii]
gi|186703906|emb|CAQ43591.1| Postreplication repair E3 ubiquitin-protein ligase RAD18
[Zygosaccharomyces rouxii]
gi|238939691|emb|CAR27866.1| ZYRO0D08404p [Zygosaccharomyces rouxii]
Length = 409
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY 95
T + TS +S+LD + C IC ++K LT C H+FC +CI +L + CP C
Sbjct: 9 TDFSHTSIPQLSQLDTLVRCHICKDLLKIPVLTPCSHTFCSLCIREYLTREPKCPLCLSE 68
Query: 96 LTNNQLYPNFLLDKLLK 112
L + L FL++++++
Sbjct: 69 LRESNLRSEFLVNEIIE 85
>gi|397496549|ref|XP_003819095.1| PREDICTED: E3 ubiquitin-protein ligase TRIM22 [Pan paniscus]
gi|157777577|gb|ABV69907.1| TRIM22 [Pan paniscus]
Length = 498
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI T + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITTKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|114050847|ref|NP_001039926.1| tripartite motif-containing protein 34 [Bos taurus]
gi|88954123|gb|AAI14125.1| TRIM6-TRIM34 readthrough transcript [Bos taurus]
Length = 488
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-----LRNKSDCPCCGHYLTNNQ 100
V L +++ CPIC +++ E CGHSFC CI L S CP CG +
Sbjct: 6 VMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTRYSLGN 65
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L+PN L ++++ ++S
Sbjct: 66 LWPNLHLANIVERLRKVKLS 85
>gi|355752393|gb|EHH56513.1| E3 ubiquitin-protein ligase TRIM22 [Macaca fascicularis]
Length = 498
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|281344812|gb|EFB20396.1| hypothetical protein PANDA_012667 [Ailuropoda melanoleuca]
Length = 241
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C+++ H ++ CP C + ++
Sbjct: 4 QVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHPDSELRCPVCRQEVDSS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP--LENFRQALQQGCGVSVKEIDSLMSLLS 152
PN L ++++ A Q P E+ R L C + I L LL
Sbjct: 64 SSPPNVSLARVIE---ALQFPGDPEPKVCEHHRNPLSLFCERDQELICGLCGLLG 115
>gi|164518944|ref|NP_001106830.1| E3 ubiquitin-protein ligase TRIM22 [Macaca mulatta]
gi|157777561|gb|ABV69899.1| TRIM22 [Macaca mulatta]
gi|355566779|gb|EHH23158.1| E3 ubiquitin-protein ligase TRIM22 [Macaca mulatta]
gi|380808720|gb|AFE76235.1| E3 ubiquitin-protein ligase TRIM22 isoform 1 [Macaca mulatta]
gi|383409215|gb|AFH27821.1| E3 ubiquitin-protein ligase TRIM22 isoform 1 [Macaca mulatta]
gi|384944716|gb|AFI35963.1| E3 ubiquitin-protein ligase TRIM22 isoform 1 [Macaca mulatta]
Length = 498
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|297680255|ref|XP_002817916.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Pongo abelii]
Length = 489
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 6 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCREAVDGS 65
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 66 SSPPNVSLARVIE 78
>gi|157777591|gb|ABV69914.1| TRIM22 [Colobus guereza kikuyuensis]
Length = 498
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQTCITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|67678434|gb|AAH97790.1| LOC432253 protein, partial [Xenopus laevis]
Length = 599
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 14 KPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHS 73
KP P + D+ Y A S L +D+ C IC+ + + CGH+
Sbjct: 21 KPKNTPEAGDSGTSSGAPHPQYGADC------FSSLTEDITCSICLDDLTDPVYITCGHT 74
Query: 74 FCYMCIITHLRNKSD--CPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQ 131
FC CI TH CP C NQ+ P++ L L+ K + I K+ + EN
Sbjct: 75 FCRNCITTHWGTSQGYLCPECRAVCPRNQIVPDYRLGNLISKIK-QGIKKSDAMQENLTA 133
Query: 132 A 132
A
Sbjct: 134 A 134
>gi|392596175|gb|EIW85498.1| hypothetical protein CONPUDRAFT_162684 [Coniophora puteana
RWD-64-598 SS2]
Length = 421
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 49 LDKDMLCPICMQIIK-EAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
LD + C IC ++ LT CGH FC +C+ H++ +SDCP C + PN +L
Sbjct: 18 LDASLRCTICGELYDGPVMLTGCGHCFCSVCVRQHIQRESDCPSCRMKTSEVAFRPNSVL 77
Query: 108 DKLL 111
++++
Sbjct: 78 EEVV 81
>gi|114613903|ref|XP_527777.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 2 [Pan
troglodytes]
gi|114613905|ref|XP_001144726.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 1 [Pan
troglodytes]
Length = 487
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|429852850|gb|ELA27965.1| DNA repair protein [Colletotrichum gloeosporioides Nara gc5]
Length = 450
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
ST G+S ++ + C +C K LT+C H+FC +CI L N+ CP C
Sbjct: 16 STPLSGLSAVEAALRCQVCKDFFKTPMLTSCCHTFCSLCIRRALSNEGKCPLCRASDQEL 75
Query: 100 QLYPNFLLDKLLKK-TSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKR 156
+L N+ ++++++ T AR+ S LE R A Q + E DS E KR
Sbjct: 76 KLRSNWAMEEIVESFTKARK-----STLEFARTAGQASPKRKLVEEDSAPEHQPEAKR 128
>gi|393009465|gb|AFN02447.1| posterior sex combs [Bombyx mori]
Length = 1096
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 46 VSELDKDMLCPICM-QIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
+ E+++ + CP+C I + C HSFC CII HL+ KS CP C + N PN
Sbjct: 29 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI--NSAKPN 86
Query: 105 FLLDKLLK 112
LDK L+
Sbjct: 87 IKLDKALQ 94
>gi|296479964|tpg|DAA22079.1| TPA: tripartite motif-containing 6 and tripartite motif-containing
34 [Bos taurus]
Length = 488
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-----LRNKSDCPCCGHYLTNNQ 100
V L +++ CPIC +++ E CGHSFC CI L S CP CG +
Sbjct: 6 VMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTQYSLGN 65
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L+PN L ++++ ++S
Sbjct: 66 LWPNLHLANIVERLRKVKLS 85
>gi|157777589|gb|ABV69913.1| TRIM22 [Papio anubis]
Length = 498
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|90960948|dbj|BAE92827.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLXNLVEKIQALQASEVQS 88
>gi|332245860|ref|XP_003272070.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Nomascus leucogenys]
Length = 475
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIEETSRGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLWNLVEKIQALQASEVQS 88
>gi|157820429|ref|NP_001099846.1| E3 ubiquitin-protein ligase TRIM31 [Rattus norvegicus]
gi|149029346|gb|EDL84606.1| tripartite motif protein 31 (predicted) [Rattus norvegicus]
Length = 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCI--ITHLRNKSDCPCCGHYLTNNQLYPN 104
S+L +D+ CPIC++I+++ CGH+FC CI I CP C ++ N PN
Sbjct: 8 SQLQEDVTCPICLEILQDPVTIDCGHNFCLKCINQIGKTSENILCPLCKCSVSKNTFRPN 67
Query: 105 FLLDKLLKK 113
LL L +K
Sbjct: 68 KLLASLAEK 76
>gi|432857066|ref|XP_004068521.1| PREDICTED: E3 ubiquitin-protein ligase RAD18-like [Oryzias latipes]
Length = 492
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+D + CPIC + + +T C H+FC +CI L K CP C +T L N +LD
Sbjct: 19 VDSLLRCPICFDYVNISMMTKCSHNFCSLCIRKFLSYKLQCPVCNTPMTEQDLRNNRILD 78
Query: 109 KL 110
+L
Sbjct: 79 EL 80
>gi|432120169|gb|ELK38705.1| Tripartite motif-containing protein 34 [Myotis davidii]
Length = 891
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 51/251 (20%)
Query: 38 AASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-------NKSDCP 90
AA TS V V ++ ++ CPIC++++KE CGHSFC CI + + +S CP
Sbjct: 2 AAMTSAVLV-DIQDEVTCPICLELLKEPLSIDCGHSFCQACITENSKESQIGQEGESSCP 60
Query: 91 CCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLE-----NFRQALQQGCGVSVKEID 145
C L PN L + ++ + + PL+ + R+ LQ C KE
Sbjct: 61 VCQTSYQLRNLRPNRHLANIAERLR-EVVLGSGEPLKVILCAHHREKLQLFC----KEDG 115
Query: 146 SLMSLLSE----------------------------KKRKMEQEEAERNMQILLDFLHCL 177
L+ L E K+ + EQ+EAE+ ++++
Sbjct: 116 KLICWLCERSQDHRGHHTFLMEEIAQEYQEKFQESLKRLRQEQQEAEKLKAVIIEKRTSW 175
Query: 178 RKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDD-----SNTRKS 232
+ Q E IQT+ + ++ ++ E+ ++ +R + + +D S K
Sbjct: 176 KNQMEPERHRIQTEFNQLRSILDKEEQRQLKKLEEEERKGLNIMEEAEDELAHQSQALKE 235
Query: 233 WLSSIDKNSSG 243
+S +++ G
Sbjct: 236 LISDLERRCQG 246
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 4 VSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIK 63
V + P+ P K P + ++ D AA+ + + + + + C IC++++
Sbjct: 351 VFSSPLTPGAK--TSPLGPEGIFKQEDPQEETRGAAAMALKFLVNMKEKVTCAICLKLLT 408
Query: 64 EAFLTACGHSFCYMCIITHLRN------KSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
E CGHSFC CI + + +S CP CG + L+ N L ++++
Sbjct: 409 EPLSLNCGHSFCQACITDNKASEIGPGGESSCPVCGVRYSLGNLWLNQHLANIVERVKEV 468
Query: 118 QIS 120
++S
Sbjct: 469 KLS 471
>gi|440889567|gb|ELR44658.1| E3 ubiquitin-protein ligase TRIM31, partial [Bos grunniens mutus]
Length = 475
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLTNNQLYP 103
+L ++M+CPIC+ I+++ CGHSFC C IT +D CP C + + + P
Sbjct: 1 KLQEEMICPICLDILQDPATIDCGHSFCLSC-ITQSGEAADSVLKCPLCNKIVKRDTITP 59
Query: 104 NFLLDKLLKKTSA 116
N+LL L++K A
Sbjct: 60 NWLLVNLVEKIQA 72
>gi|281182436|ref|NP_001162333.1| E3 ubiquitin-protein ligase TRIM22 [Papio anubis]
gi|160904170|gb|ABX52156.1| tripartite motif-containing 22 (predicted) [Papio anubis]
Length = 498
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|157777557|gb|ABV69897.1| TRIM22 [Cercocebus atys]
Length = 498
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|90960950|dbj|BAE92828.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLXNLVEKIQALQASEVQS 88
>gi|19115578|ref|NP_594666.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698449|sp|Q9UTL9.1|YIV5_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C144.05
gi|6138896|emb|CAB59685.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe]
Length = 1375
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 54 LCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
+C IC IIK+ F+T CGH +C C+ L++ S CP C L N Y
Sbjct: 1091 ICIICRDIIKQGFITTCGHLYCSFCLEAWLKHSSSCPMCKTKLNKNNAY 1139
>gi|397519274|ref|XP_003829791.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Pan paniscus]
Length = 460
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|195394527|ref|XP_002055894.1| GJ10519 [Drosophila virilis]
gi|194142603|gb|EDW59006.1| GJ10519 [Drosophila virilis]
Length = 783
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F TEP++L+SG
Sbjct: 73 VAWSTLDSNILATAATNGVVSVWDLSKFGRQKQLLVYHEHERTAHTVTFHSTEPNILISG 132
Query: 488 SDDCKV 493
S D +
Sbjct: 133 SQDGTI 138
>gi|119590093|gb|EAW69687.1| hCG1642804, isoform CRA_a [Homo sapiens]
gi|119590096|gb|EAW69690.1| hCG1642804, isoform CRA_a [Homo sapiens]
Length = 250
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSLPNVSLARVIE 76
>gi|114614087|ref|XP_001154917.1| PREDICTED: tripartite motif-containing protein 73 isoform 2 [Pan
troglodytes]
Length = 250
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSYHLDAELRCPVCWQVVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|194375319|dbj|BAG62772.1| unnamed protein product [Homo sapiens]
Length = 420
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQISKTASP----LENFRQALQQGCGVSVKEIDSLMSLLSEKKR 156
L PN L ++++ ++S E+ + LQ C KE D + L +E++R
Sbjct: 68 LRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFC----KE-DGKVILDNEEQR 122
Query: 157 KMEQ-EEAERNMQILLDFLHCLRKQKVDELKEIQT 190
++++ EE E N +LD L Q V + ++ T
Sbjct: 123 ELQKLEEGEVN---VLDNLAAATDQLVQQRQDAST 154
>gi|170292124|pdb|2ECI|A Chain A, Solution Structure Of The Ring Domain Of The Human Tnf
Receptor-Associated Factor 6 Protein
Length = 86
Score = 55.1 bits (131), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYPN 104
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P+
Sbjct: 22 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 78
>gi|157777587|gb|ABV69912.1| TRIM22 [Pygathrix nemaeus]
Length = 498
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI +T R +S CP C +
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQTCITAKIKESVTISRGESSCPVCQSRFQPGK 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|195445133|ref|XP_002070188.1| GK11167 [Drosophila willistoni]
gi|194166273|gb|EDW81174.1| GK11167 [Drosophila willistoni]
Length = 695
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
+SW+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 72 VSWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 131
Query: 488 SDDCKV 493
S D +
Sbjct: 132 SQDGTI 137
>gi|426352202|ref|XP_004043605.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Gorilla gorilla
gorilla]
Length = 474
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLWNLVEKIQALQASEVQS 88
>gi|426254717|ref|XP_004021023.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50
[Ovis aries]
Length = 456
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CP+C+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSVPELEDRLQCPMCLEVFKEPLMLQCGHSYCKGCLVSVSRHLAAELRCPECRREVDYS 63
Query: 100 QLYPNFLLDKLLK 112
PN L K+++
Sbjct: 64 SSPPNVSLAKVIE 76
>gi|41053615|ref|NP_956578.1| E3 ubiquitin-protein ligase TRIM41 [Danio rerio]
gi|29612576|gb|AAH49412.1| Zgc:56368 [Danio rerio]
Length = 479
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-RNKSD-----CPCCGHYLTNNQ 100
EL K+++C IC+ + + CGH+FC MCI+ H N D CP C
Sbjct: 9 GELQKELVCSICLDYFDDPVILKCGHNFCRMCILMHWEENGGDDVGYQCPECRMVFAKMS 68
Query: 101 LYPNFLLDKLLKKTSARQISKTASP 125
N+L+ L+ K S KT P
Sbjct: 69 FTKNYLVKNLVDKLSDFDYLKTCRP 93
>gi|238538003|pdb|3HCT|A Chain A, Crystal Structure Of Traf6 In Complex With Ubc13 In The P1
Space Group
gi|238538005|pdb|3HCU|A Chain A, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2
Space Group
gi|238538007|pdb|3HCU|C Chain C, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2
Space Group
Length = 118
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYPN 104
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P+
Sbjct: 15 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 71
>gi|16877522|gb|AAH17017.1| Tripartite motif-containing 31 [Homo sapiens]
gi|30582189|gb|AAP35321.1| tripartite motif-containing 31 [Homo sapiens]
gi|61360717|gb|AAX41911.1| tripartite motif-containing 31 [synthetic construct]
gi|61360720|gb|AAX41912.1| tripartite motif-containing 31 [synthetic construct]
gi|123995881|gb|ABM85542.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|62865604|ref|NP_008959.3| E3 ubiquitin-protein ligase TRIM31 [Homo sapiens]
gi|68068082|sp|Q9BZY9.2|TRI31_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|86197929|dbj|BAE78603.1| tripartite motif-containing 31 [Homo sapiens]
gi|123231709|emb|CAM26290.1| tripartite motif-containing 31 [Homo sapiens]
gi|158261563|dbj|BAF82959.1| unnamed protein product [Homo sapiens]
gi|261859140|dbj|BAI46092.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|148671303|gb|EDL03250.1| mCG1026141 [Mus musculus]
Length = 90
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLLKKT 114
PIC + +EA++T CG SFCY CI L + + C + + N + LYPNFL+++L+ K
Sbjct: 1 PICFDMTEEAYMTKCGLSFCYKCIPQSLEDNNRCTKYNYVVDNIDHLYPNFLVNELILKQ 60
Query: 115 SAR 117
R
Sbjct: 61 KQR 63
>gi|62897017|dbj|BAD96449.1| tripartite motif protein 31 isoform alpha variant [Homo sapiens]
Length = 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|119623664|gb|EAX03259.1| tripartite motif-containing 31, isoform CRA_c [Homo sapiens]
Length = 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|317419567|emb|CBN81604.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS--DCPCC-GHYLTNNQLYPNFLLDK 109
LCPIC+ + T CGH+FC CI T+ N CP C + L N + +
Sbjct: 13 FLCPICLDVFNRPVSTPCGHNFCMSCITTYWTNAPVCQCPVCKAAFERRPDLKVNTFISE 72
Query: 110 LLKKTSARQISKTASPLENFRQALQQGCG-VSVKEIDSLMSLLSEKKRKMEQ-----EEA 163
L + + Q++ A + RQ Q GCG V + L +L+SE +R + EE
Sbjct: 73 LASQFMSLQVAD-ALIWSSDRQ--QAGCGDVMANSVQDLTALVSEIQRSQRELVKVMEEK 129
Query: 164 ERNMQILLD-FLHCLRKQ---------KVDELKEIQTDLHYIKE-------------DIN 200
++ + D F+ + ++ K+ ELK+ + L ++K +
Sbjct: 130 QKTAEAQADGFIGSMEREINELQRTTMKLRELKQTKDQLSFLKNFPKHSLLPHTMDLSLF 189
Query: 201 AVERHRIDLYRARDRYS---VKLRMLGDDSNT 229
+ RH ++++ R S +LRML + NT
Sbjct: 190 SFNRH-VEVHHIRKSLSKSVSQLRMLLNKMNT 220
>gi|150865495|ref|XP_001384734.2| DNA repair protein and ATPase [Scheffersomyces stipitis CBS 6054]
gi|149386751|gb|ABN66705.2| DNA repair protein and ATPase [Scheffersomyces stipitis CBS 6054]
Length = 474
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY 95
T AST +SELD C IC + LT C H+FC CI +L S CP C
Sbjct: 17 TDWASTKLPRLSELDSLKRCYICKEFFTAPVLTVCHHTFCSQCIRQYLLTNSHCPLCKTE 76
Query: 96 LTNNQLYPNFLLDKLL 111
L + L + LLD+++
Sbjct: 77 LYESSLKRDMLLDEIV 92
>gi|50285519|ref|XP_445188.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524491|emb|CAG58088.1| unnamed protein product [Candida glabrata]
Length = 1470
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
M C IC+Q I + CGH FC CI + L+N+ CP C H +N ++Y NF
Sbjct: 1162 MECSICLQPITNGAMVNCGHLFCTSCIFSWLKNRKTCPLCKHPTSNCEVY-NF 1213
>gi|30584893|gb|AAP36702.1| Homo sapiens tripartite motif-containing 31 [synthetic construct]
gi|61370435|gb|AAX43495.1| tripartite motif-containing 31 [synthetic construct]
Length = 426
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|30023818|ref|NP_835226.1| E3 ubiquitin-protein ligase TRIM50 [Homo sapiens]
gi|56404881|sp|Q86XT4.1|TRI50_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465648|gb|AAL91071.1| tripartite motif protein 50 isoform alpha [Homo sapiens]
Length = 487
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLLELEDWLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSLPNVSLARVIE 76
>gi|367001446|ref|XP_003685458.1| hypothetical protein TPHA_0D03910 [Tetrapisispora phaffii CBS 4417]
gi|357523756|emb|CCE63024.1| hypothetical protein TPHA_0D03910 [Tetrapisispora phaffii CBS 4417]
Length = 485
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY 95
T A +S +S+LD + C IC +K LT C H+FC +C+ +L ++ CP C
Sbjct: 9 TDYAKSSIPKLSQLDSLLRCHICKNFLKNPVLTPCSHTFCSICMRLYLSKEAKCPLCLKE 68
Query: 96 LTNNQLYPNFLLDKLLKK-TSARQISKTASPLENFR--QALQQGCGVSVKEIDS 146
+ + L +L+++++ T+ R L N + +A Q G +S+ E++S
Sbjct: 69 VRESMLRSEYLVNEIVGSYTNIRD-----ELLANLKKQEARQDGQDISIVEVES 117
>gi|29465650|gb|AAL91072.1| tripartite motif protein 50 isoform beta [Homo sapiens]
Length = 486
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLLELEDWLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSLPNVSLARVIE 76
>gi|291236304|ref|XP_002738080.1| PREDICTED: ring finger protein 41-like [Saccoglossus kowalevskii]
Length = 326
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR--NKSDCPCCGHYLTNNQLYP 103
V+ D+++LC IC ++++A LT CGH+FC +C+ T L N CPCC ++ Q+ P
Sbjct: 9 VTTPDQNLLCGICSCVVEDAVLTRCGHTFCELCLDTWLTRPNTDTCPCCRGRISKYQVSP 68
Query: 104 NFLLDKLL 111
+ L ++
Sbjct: 69 VWSLRAIV 76
>gi|119623666|gb|EAX03261.1| tripartite motif-containing 31, isoform CRA_e [Homo sapiens]
Length = 349
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|71029014|ref|XP_764150.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351104|gb|EAN31867.1| hypothetical protein TP04_0515 [Theileria parva]
Length = 309
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+ KD CPIC I+ + T+CGH+FC CI + + +CP C L+ +Q PN LL
Sbjct: 3 VPKDFECPICFNILYKPVTTSCGHNFCKFCIDQAIHSSPNCPLCRIPLS-SQYSPNLLLT 61
Query: 109 KLL 111
+L+
Sbjct: 62 QLI 64
>gi|147901488|ref|NP_001085170.1| ring finger protein 112 [Xenopus laevis]
gi|83318197|gb|AAI08431.1| LOC432253 protein [Xenopus laevis]
Length = 612
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 18 KPSSTDTAPQETDAAAAYTAAASTSEVGV---SELDKDMLCPICMQIIKEAFLTACGHSF 74
KP +T P+ D+ + + +A + G S L +D+ C IC+ + + CGH+F
Sbjct: 33 KPKNT---PEAGDSGTS-SGSAPHPQYGADCFSSLTEDITCSICLDDLTDPVYITCGHTF 88
Query: 75 CYMCIITHLRNKSD--CPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQA 132
C CI TH CP C NQ+ P++ L L+ K + I K+ + EN A
Sbjct: 89 CRNCITTHWGTSQGYLCPECRAVCPRNQIVPDYRLGNLISKIK-QGIKKSDAMQENLTAA 147
>gi|348508869|ref|XP_003441975.1| PREDICTED: hypothetical protein LOC100708332 [Oreochromis
niloticus]
Length = 1366
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL----RNKSDCPC 91
T AS + G+S L + + CPIC+ ++ T C H FC C++ L +NK++CP
Sbjct: 3 TPTASDVKKGISALWETLQCPICLDLMTAPVSTKCDHQFCKFCMMKLLDKSKQNKANCPV 62
Query: 92 CGHYLTNNQLYPNFLLDKLL 111
C +T L + KL+
Sbjct: 63 CKSTVTKRSLQESPGFQKLV 82
>gi|899300|emb|CAA57684.1| gpStaf50 [Homo sapiens]
Length = 442
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|440796009|gb|ELR17118.1| Ubox domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 392
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-NKSDCPCCGHYLTNNQLYPNF 105
SE ++ PI + I++EA + CGHSF + I T LR N CP C LT QL PN+
Sbjct: 5 SEAPEEFSDPITLSIMEEAMMATCGHSFSRVSITTWLRQNHPSCPVCKRSLTEEQLVPNY 64
Query: 106 LLDKLLKKTSAR 117
L +++ A+
Sbjct: 65 ALRSAIERYRAK 76
>gi|62529022|gb|AAX84806.1| TRIM50 [Gorilla gorilla]
Length = 102
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+ + HL K CP C + +
Sbjct: 4 QVSLLELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLGSLSYHLDTKLRCPMCWQVVDGS 63
Query: 100 QLYPNFLL 107
PN L
Sbjct: 64 SSPPNVSL 71
>gi|426356494|ref|XP_004045601.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50
[Gorilla gorilla gorilla]
Length = 488
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLLELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|344251973|gb|EGW08077.1| Breast cancer type 1 susceptibility protein-like [Cricetulus
griseus]
Length = 1790
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPISTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGST 77
Query: 106 ----LLDKLLKKTSARQI 119
L+++LLK T A ++
Sbjct: 78 RFSQLVEELLKITDAFEL 95
>gi|47938645|gb|AAH72332.1| LOC432253 protein, partial [Xenopus laevis]
Length = 598
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 18 KPSSTDTAPQETDAAAAYTAAASTSEVGV---SELDKDMLCPICMQIIKEAFLTACGHSF 74
KP +T P+ D+ + + +A + G S L +D+ C IC+ + + CGH+F
Sbjct: 19 KPKNT---PEAGDSGTS-SGSAPHPQYGADCFSSLTEDITCSICLDDLTDPVYITCGHTF 74
Query: 75 CYMCIITHLRNKSD--CPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQA 132
C CI TH CP C NQ+ P++ L L+ K + I K+ + EN A
Sbjct: 75 CRNCITTHWGTSQGYLCPECRAVCPRNQIVPDYRLGNLISKIK-QGIKKSDAMQENLTAA 133
>gi|47221369|emb|CAF97287.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1405
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVV-EMPTR------SKLSCLSWNKFSKNRIA 442
L A+ + + V D S+V +P + PVV P R +K++ L+W+ + R+
Sbjct: 633 LLASGSANAVVYVHDLRSIVEDPPE--SPVVLTEPHRRLCGHTAKITGLAWSPHHEARLV 690
Query: 443 SSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ Y+G VWDV + V Y+ H VD+S +P ++ +G D V
Sbjct: 691 TVSYDGTAQVWDVLQEAPVCNYQGHAGHLLCVDWSPVDPDVIWTGGKDFTV 741
>gi|403223896|dbj|BAM42026.1| uncharacterized protein TOT_040000402 [Theileria orientalis strain
Shintoku]
Length = 406
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+ K+ CPIC+ ++ + T+CGH+FC CI L +CP C LTN+ PN LL
Sbjct: 3 IPKEFECPICLNLLFKPVTTSCGHNFCKQCIDKTLLVTQNCPICKLQLTNDY-SPNLLLV 61
Query: 109 KLLKKTSARQIS 120
+++ + +I+
Sbjct: 62 QIINERFPEEIN 73
>gi|327275572|ref|XP_003222547.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Anolis carolinensis]
Length = 1360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
L K++ CPIC+ ++KE T C H FC C + LR K + CP C +T L +
Sbjct: 18 LQKNLECPICLDVMKEPVSTNCAHIFCRFCTLKLLRQKTGVTQCPLCNAKVTKRSLREDV 77
Query: 106 LLDKLLK 112
+++K
Sbjct: 78 RFKQVIK 84
>gi|354484980|ref|XP_003504663.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cricetulus griseus]
Length = 1805
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPISTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGST 77
Query: 106 ----LLDKLLKKTSARQI 119
L+++LLK T A ++
Sbjct: 78 RFSQLVEELLKITDAFEL 95
>gi|327266526|ref|XP_003218055.1| PREDICTED: tripartite motif-containing protein 10-like [Anolis
carolinensis]
Length = 479
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 42 SEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD------CPCCGHY 95
S V V +L +D LCP+C Q + + L C H+FC +CI + +K + CP C
Sbjct: 3 SPVSVVDLKEDALCPLCKQYLTDPVLVDCDHNFCRICISDYYVSKKEKNEPLQCPVCSSP 62
Query: 96 LTNNQLYPNFLLDKL---LKKTSARQISK 121
+ +L PN L + LKK A ++ K
Sbjct: 63 IQEGKLRPNQQLGSIVEKLKKLPALKVGK 91
>gi|146175590|ref|XP_001019723.2| hypothetical protein TTHERM_00136420 [Tetrahymena thermophila]
gi|146144703|gb|EAR99478.2| hypothetical protein TTHERM_00136420 [Tetrahymena thermophila
SB210]
Length = 543
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 38 AASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT 97
A E L K+ CPIC + + + CGHSFC CI + ++ +CP C ++
Sbjct: 378 VADQIEEKFQNLLKEFDCPICFLPFENCYTSKCGHSFCQSCIQSSVQKFGNCPVCQQNIS 437
Query: 98 NNQLYPNFLLDKLLKKTSARQISKTAS-------PLENFRQALQQGCGVSVKEIDSLMSL 150
L+ NF +++ +K + ++ +T + + +F++ QQ ++ I+S+ +
Sbjct: 438 QEDLFRNFHMNE-IKSIAYKEKEETKNYEINRLKHMNSFKEKFQQIMQTNI--INSVQAQ 494
Query: 151 LSEKK 155
L +K+
Sbjct: 495 LEKKQ 499
>gi|62638180|gb|AAX92675.1| BRCA1-like protein [Monodelphis domestica]
Length = 1844
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYP-- 103
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 22 MQKILECPICLELIKEPVSTTCDHIFCRFCMLKLLSKKKGPSQCPLCKNNITKRSLREST 81
Query: 104 --NFLLDKLLKKTSARQI 119
N L++ LLK A ++
Sbjct: 82 RFNQLVEGLLKTIRAFEL 99
>gi|449504940|ref|XP_004162336.1| PREDICTED: uncharacterized LOC101222261 [Cucumis sativus]
Length = 867
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C +++K+A LT+ C SFC CI H+ KS C C + + L P
Sbjct: 285 VGDLPPELHCPLCKEVMKDAVLTSKCCFKSFCDKCIRDHIITKSACVCGATNILADDLLP 344
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQ----QGCGVSVKEIDSLMSLLSEKKRKME 159
N K L+ T R + S +N A Q + V+ ++ S + K
Sbjct: 345 N----KTLRDTINRILESGNSSADNAGSAYQVQDMESARVAQPKVPSPTLSAASK----- 395
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
ERN+Q +++ + ++V+E K + + + E + A +
Sbjct: 396 ---GERNIQSVIE--ETTKTKEVEEEKVVTSGPQTLVEKVKATK 434
>gi|332021185|gb|EGI61570.1| E3 ubiquitin-protein ligase RAD18 [Acromyrmex echinatior]
Length = 681
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
ST V + +D + C IC + + +T+C HS+C +CI +L +K+ CP C +
Sbjct: 3 STEYVELKRIDALLQCGICYDYMDTSVITSCSHSYCSLCIRKYLHHKTQCPTCFEEIFEK 62
Query: 100 QLYPNFLLDKLL 111
L N L+D+++
Sbjct: 63 DLRKNKLVDEII 74
>gi|449458968|ref|XP_004147218.1| PREDICTED: uncharacterized protein LOC101222261 [Cucumis sativus]
Length = 867
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C +++K+A LT+ C SFC CI H+ KS C C + + L P
Sbjct: 285 VGDLPPELHCPLCKEVMKDAVLTSKCCFKSFCDKCIRDHIITKSACVCGATNILADDLLP 344
Query: 104 NFLLDKLLKKTSARQISKTASPLENFRQALQ----QGCGVSVKEIDSLMSLLSEKKRKME 159
N K L+ T R + S +N A Q + V+ ++ S + K
Sbjct: 345 N----KTLRDTINRILESGNSSADNAGSAYQVQDMESARVAQPKVPSPTLSAASK----- 395
Query: 160 QEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVE 203
ERN+Q +++ + ++V+E K + + + E + A +
Sbjct: 396 ---GERNIQSVIE--ETTKTKEVEEEKVVTSGPQTLVEKVKATK 434
>gi|344285134|ref|XP_003414318.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Loxodonta africana]
Length = 1853
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C +++T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNHITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|328767735|gb|EGF77784.1| hypothetical protein BATDEDRAFT_91452 [Batrachochytrium
dendrobatidis JAM81]
Length = 318
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP-- 103
V +L K C +C+ K+ T CGH FC+ CI RNK +CP C + +NQLYP
Sbjct: 260 VGQLQK---CTLCLGERKQTTATPCGHLFCWKCIGDWCRNKPECPLCRQAVMHNQLYPII 316
Query: 104 NF 105
NF
Sbjct: 317 NF 318
>gi|119623662|gb|EAX03257.1| tripartite motif-containing 31, isoform CRA_a [Homo sapiens]
Length = 267
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|344231845|gb|EGV63724.1| hypothetical protein CANTEDRAFT_93238 [Candida tenuis ATCC 10573]
Length = 357
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN----NQL 101
+ +L + C +C +I+ +++CGHSFCY C + NK+ CP C H L N +
Sbjct: 18 LGDLADSLECSVCAEIMVMPVISSCGHSFCYECCSSWFENKATCPTCRHELDTPPALNVV 77
Query: 102 YPNF---LLDKLLKKTSARQISKTASPL--ENFRQALQ 134
+ L+D LL ++S K L EN R+ Q
Sbjct: 78 LKDISHRLVDVLLDQSSLGDNEKQELKLRQENSRKTYQ 115
>gi|77020291|ref|NP_001029141.1| breast cancer type 1 susceptibility protein [Monodelphis domestica]
Length = 1840
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYP-- 103
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTTCDHIFCRFCMLKLLSKKKGPSQCPLCKNNITKRSLREST 77
Query: 104 --NFLLDKLLKKTSARQI 119
N L++ LLK A ++
Sbjct: 78 RFNQLVEGLLKTIRAFEL 95
>gi|410914868|ref|XP_003970909.1| PREDICTED: gem-associated protein 5-like [Takifugu rubripes]
Length = 1631
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTR-----SKLSCLSWNKFSKNRIASS 444
L A+ + + V D S++ +P + + E R SK++ ++W+ R+ +
Sbjct: 582 LLASGSSNAIVYVHDLRSIIEDPPEGPLVLTEPHRRLCGHTSKITGMAWSPHHDARLVTV 641
Query: 445 DYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
Y+G VWDV + V Y+ H SVD+S +P ++ +G D V
Sbjct: 642 SYDGTAQVWDVLQEAPVSNYQGHTGYLLSVDWSPVDPDVIWTGGKDFTV 690
>gi|432896007|ref|XP_004076254.1| PREDICTED: nuclear factor 7, brain-like [Oryzias latipes]
Length = 476
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 40 STSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-RNKSD----CPCCGH 94
+T+ +L K++ CPIC+++ K+ + CGH+FC CI H N D CP C
Sbjct: 2 ATAAAAGEDLKKELTCPICLEVFKDPVILKCGHNFCRFCICLHWDENGGDYGYQCPQCRT 61
Query: 95 YLTNNQLYPNFLLDKLLKK 113
+ N+L+ L+ K
Sbjct: 62 VFSKRTFTKNYLVQNLVAK 80
>gi|393238591|gb|EJD46127.1| DNA repair protein rad18 [Auricularia delicata TFB-10046 SS5]
Length = 375
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
E +++LD CPIC + + CGHSFC +C+ L K +CP C L
Sbjct: 17 EPKLAKLDASHRCPICKEFLDGPVSLNCGHSFCSLCVRGALSGKQECPSCREKAVEGHLK 76
Query: 103 PNFLLDK-LLKKTSARQISKTAS-PLE 127
N L++ ++ +AR I A+ P+E
Sbjct: 77 KNLALEEAVIAWKAARPIVLAATKPIE 103
>gi|260789153|ref|XP_002589612.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
gi|229274792|gb|EEN45623.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
Length = 350
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A T+E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C
Sbjct: 33 AITDTTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTC 92
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 93 RKKLVSKRSLRPDPNFDALISK 114
>gi|343961883|dbj|BAK62529.1| tripartite motif-containing protein 31 [Pan troglodytes]
Length = 347
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 35 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 93
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 94 RFNSLLRNLVEKIQALQASEVQS 116
>gi|328871515|gb|EGG19885.1| MEK1 interacting protein 1 [Dictyostelium fasciculatum]
Length = 367
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 33 AAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
+A ++TS G E K + CPIC + +++ T CGH FC CI L + CP C
Sbjct: 293 SAANGGSTTSTTGPKEKKKKISCPICFEKMEKMSSTTCGHVFCTDCIQAALTRRKVCPVC 352
Query: 93 GHYLTNNQLY 102
LT + Y
Sbjct: 353 STKLTAKKPY 362
>gi|194765322|ref|XP_001964776.1| GF22867 [Drosophila ananassae]
gi|190615048|gb|EDV30572.1| GF22867 [Drosophila ananassae]
Length = 778
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 72 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 131
Query: 488 SDDCKV 493
S D +
Sbjct: 132 SQDGTI 137
>gi|432931016|ref|XP_004081573.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Oryzias latipes]
Length = 737
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 26 PQETDAAAAYTAAASTSEVGVSEL--DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL 83
P+ + AA + + +EL DM C +CM++ E T CGH+FC C+ L
Sbjct: 413 PRPDEPCTIQDAAVAGGRLVATELLDSGDMECSLCMRLFYEPVTTPCGHTFCLKCLERCL 472
Query: 84 RNKSDCPCC----GHYLTNNQLYPNFLLDKLLKK 113
+ S+CP C YL FL++++L++
Sbjct: 473 DHNSNCPLCKENLAEYLAARGYSKTFLMEEVLQR 506
>gi|195341279|ref|XP_002037238.1| GM12225 [Drosophila sechellia]
gi|194131354|gb|EDW53397.1| GM12225 [Drosophila sechellia]
Length = 777
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 488 SDDCKV 493
S D +
Sbjct: 131 SQDGTI 136
>gi|432948711|ref|XP_004084133.1| PREDICTED: gem-associated protein 5-like, partial [Oryzias latipes]
Length = 876
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTR------SKLSCLSWNKFSKNRIAS 443
L A+ + + V D SV+ P + + E P R +K++ ++W+ R+ +
Sbjct: 138 LLASGSSNAIVYVHDLRSVIENPPETPVVLTE-PYRRLCGHTAKITGMAWSPHHSARLVT 196
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ Y+G VWDV + + Y H SVD+S +P ++ +G D V
Sbjct: 197 ASYDGTAQVWDVLEEAPISNYRGHVGYLLSVDWSPVDPDVIWTGGKDFTV 246
>gi|194906138|ref|XP_001981319.1| GG12005 [Drosophila erecta]
gi|190655957|gb|EDV53189.1| GG12005 [Drosophila erecta]
Length = 777
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 488 SDDCKV 493
S D +
Sbjct: 131 SQDGTI 136
>gi|195503190|ref|XP_002098547.1| GE10431 [Drosophila yakuba]
gi|194184648|gb|EDW98259.1| GE10431 [Drosophila yakuba]
Length = 777
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 488 SDDCKV 493
S D +
Sbjct: 131 SQDGTI 136
>gi|66822495|ref|XP_644602.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|66822589|ref|XP_644649.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472704|gb|EAL70654.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472772|gb|EAL70722.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
Length = 552
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%)
Query: 38 AASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT 97
A T G + K++ CPIC + K T CGH FC CI+ L+ K CP C L
Sbjct: 483 AIDTQSNGGDKKSKNLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLH 542
Query: 98 NNQLY 102
+ Y
Sbjct: 543 GKKPY 547
>gi|303389668|ref|XP_003073066.1| putative zinc finger domain-containing protein [Encephalitozoon
intestinalis ATCC 50506]
gi|303302210|gb|ADM11706.1| putative zinc finger domain-containing protein [Encephalitozoon
intestinalis ATCC 50506]
Length = 101
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 44 VGVSEL----DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG 93
+G SE+ D D+LC IC + +E LT CGHSFC +C I ++ +C CG
Sbjct: 38 IGFSEMGMISDDDLLCGICKKTFEERVLTECGHSFCSLCAIKKYQDGDECNVCG 91
>gi|432877593|ref|XP_004073176.1| PREDICTED: ligand of Numb protein X 2-like [Oryzias latipes]
Length = 692
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
+ E+D +++C IC+Q + + T CGH++C+ C+ L+++ CP YL Q P+
Sbjct: 40 LDEVDDELICHICLQPLLKPMDTPCGHTYCFYCLSNFLKDQDFCPVDRQYLEFEQCRPSS 99
Query: 106 LL 107
LL
Sbjct: 100 LL 101
>gi|328770315|gb|EGF80357.1| hypothetical protein BATDEDRAFT_24856 [Batrachochytrium
dendrobatidis JAM81]
Length = 581
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 28 ETDAAAAYTAAASTSEVGVSE----------LDKDMLCPICMQIIKEAFLTACGHSFCYM 77
E+DA+ A ++ E+ + E +D+ + CPIC ++ A + C H+FC +
Sbjct: 11 ESDASRTALALDASEELDLKEWPDSLTPFKAMDESLRCPICKELFDAAMILPCIHTFCSL 70
Query: 78 CIITHLRNKSDCPCCGHYLTN-NQLYPNFLLDKLL 111
CI L K CP CG +T + L N +LD L+
Sbjct: 71 CIRQSLLVKMQCPSCGKDVTGLHALKNNRVLDDLV 105
>gi|28572024|ref|NP_651720.3| CG7609, isoform B [Drosophila melanogaster]
gi|4972748|gb|AAD34769.1| unknown [Drosophila melanogaster]
gi|23172592|gb|AAN14184.1| CG7609, isoform B [Drosophila melanogaster]
gi|220943706|gb|ACL84396.1| CG7609-PB [synthetic construct]
Length = 776
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 488 SDDCKV 493
S D +
Sbjct: 131 SQDGTI 136
>gi|348533582|ref|XP_003454284.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Oreochromis niloticus]
Length = 731
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 16 DMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDML------CPICMQIIKEAFLTA 69
DM+P D+ + + + ++ + + KD+L C +CM++ E T
Sbjct: 392 DMEPCVVDSGSSKHKKQGEHRSKQKPTKPKMRTIPKDLLDSNDLECSLCMRLFYEPVTTP 451
Query: 70 CGHSFCYMCIITHLRNKSDCPCC----GHYLTNNQLYPNFLLDKLLKKTSARQISK 121
CGH+FC C+ L + CP C YL + + LLD L+K+ +R+ ++
Sbjct: 452 CGHTFCKNCLERCLDHMPQCPLCKESLKEYLASRKFKETTLLDMLIKQYLSREYAE 507
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 24 TAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL 83
P+ ++ AA S++E V E CP C + E ACGHS+C C+ L
Sbjct: 86 AGPEPLSGRSSRDAAESSAEEDVLE------CPNCHCFLGEPVTLACGHSYCKRCLQRRL 139
Query: 84 RNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKT 122
+K C C ++ + N +L LL K ++ K+
Sbjct: 140 LHK--CKLCSEHVRGEEKV-NVILCALLSKWFPEEVEKS 175
>gi|332211577|ref|XP_003254893.1| PREDICTED: E3 ubiquitin-protein ligase TRIM22 [Nomascus leucogenys]
gi|157777563|gb|ABV69900.1| TRIM22 [Nomascus leucogenys]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|442621728|ref|NP_733303.2| CG7609, isoform C [Drosophila melanogaster]
gi|440218036|gb|AAF56930.3| CG7609, isoform C [Drosophila melanogaster]
Length = 777
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 488 SDDCKV 493
S D +
Sbjct: 131 SQDGTI 136
>gi|351709198|gb|EHB12117.1| Tripartite motif-containing protein 5 [Heterocephalus glaber]
Length = 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCII------THLRNKSDCPCCGHYLTNNQL 101
E+ +++ CPIC++++KE T CGHSFC +CI H + S CP C L
Sbjct: 8 EVKEEVTCPICLELLKEPVSTDCGHSFCKLCITANCGSSVHEQGVSSCPVCRVTFQFESL 67
Query: 102 YPN 104
PN
Sbjct: 68 RPN 70
>gi|313760629|ref|NP_001186502.1| E3 ubiquitin-protein ligase TRIM22 isoform 2 [Homo sapiens]
Length = 494
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|229576989|ref|NP_001153280.1| E3 ubiquitin-protein ligase TRIM22 [Pongo abelii]
gi|157777581|gb|ABV69909.1| TRIM22 [Pongo abelii]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|119589173|gb|EAW68767.1| tripartite motif-containing 22, isoform CRA_a [Homo sapiens]
gi|119589174|gb|EAW68768.1| tripartite motif-containing 22, isoform CRA_a [Homo sapiens]
Length = 494
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|55250220|gb|AAH85615.1| BRCA1 protein, partial [Homo sapiens]
Length = 624
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|383853878|ref|XP_003702449.1| PREDICTED: gem-associated protein 5-like [Megachile rotundata]
Length = 1325
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 20/172 (11%)
Query: 340 GYNAGLADFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRR 399
G+ GL F F + + +++ H ++H + + + F A A SR
Sbjct: 519 GFENGLISFCD--NKFKTFGTAKFSSKMLHCLVWHPESTTTDLTFSPLKNYLAAAFESRT 576
Query: 400 IKVFDFASVVNEPADVHCP----------------VVEMPTRS--KLSCLSWNKFSKNRI 441
I +FD ++++ + P VV T + CL+W+ + +
Sbjct: 577 IVIFDLTNLMDHFTKLQDPTNNNEKENSDIYEVNEVVATLTGHIHNVVCLAWSPYISGHL 636
Query: 442 ASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
S Y+GI VW+V TQ+ + Y H +S + +++GS D V
Sbjct: 637 ISGSYDGIAQVWNVETQELIATYTGHSGPVLCCMWSPLNSNFIITGSADFTV 688
>gi|348559172|ref|XP_003465390.1| PREDICTED: tripartite motif-containing protein 6-like [Cavia
porcellus]
Length = 594
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 20 SSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI 79
S D + +A A AA TS V V ++ +++ CPIC++++ E CGHSFC CI
Sbjct: 87 SGNDKKSRSVFSARARRAATMTSRVLV-DIREEVTCPICLELLTEPLSIDCGHSFCQACI 145
Query: 80 -------ITHLRNKSDCPCCGHYLTNNQLYPNFLL----DKLLKKTSARQISKTASPLEN 128
+ +S CP C L PN L ++L + + T
Sbjct: 146 AENTEKSVIGQEEESSCPVCQTSYQPQHLRPNRHLANIAERLREVVLGPERQTTVILCAQ 205
Query: 129 FRQALQQGCGVSVKEIDSLMSLLSEKKRK-------MEQEEAERNMQILLDFLHCLRK-- 179
+ LQ C KE +L+ L E+ ++ + +E A+ ++ + L LRK
Sbjct: 206 HGEKLQLFC----KEDGTLICWLCERSQEHRGHHTFLMEEVAQEYQEMFQESLKKLRKEE 261
Query: 180 QKVDELKEIQTDLHYIKEDINAVERHRI 207
++ + LK + + ++ ERHRI
Sbjct: 262 EEAERLKAVIREKRASWKNQMEPERHRI 289
>gi|157777583|gb|ABV69910.1| TRIM22 [Symphalangus syndactylus]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|118097428|ref|XP_414574.2| PREDICTED: gem-associated protein 5 [Gallus gallus]
Length = 1528
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTR------SKLSCLSWNKFSKNRIAS 443
L A+ V+ I V + SV+ ++ + E P R SK++ LSW+ + R+ S
Sbjct: 594 LIASGSVNAIIYVHNLKSVIESTSESPLTITE-PFRTLAGHTSKVTSLSWSPHHEGRLVS 652
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 493
+ Y+G VWDV ++ + Y H+ R V +S + + +G+DD V
Sbjct: 653 ACYDGTAQVWDVMKEEPLCNYRGHQGRLLCVQWSPVDSDSIYTGADDFSV 702
>gi|116283348|gb|AAH22281.1| Tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|117938316|ref|NP_006065.2| E3 ubiquitin-protein ligase TRIM22 isoform 1 [Homo sapiens]
gi|47606181|sp|Q8IYM9.1|TRI22_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM22; AltName: Full=50
kDa-stimulated trans-acting factor; AltName: Full=RING
finger protein 94; AltName: Full=Staf-50; AltName:
Full=Tripartite motif-containing protein 22
gi|23272543|gb|AAH35582.1| Tripartite motif-containing 22 [Homo sapiens]
gi|123980596|gb|ABM82127.1| tripartite motif-containing 22 [synthetic construct]
gi|123995417|gb|ABM85310.1| tripartite motif-containing 22 [synthetic construct]
gi|208967989|dbj|BAG73833.1| tripartite motif-containing protein 22 [synthetic construct]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|158261891|dbj|BAF83123.1| unnamed protein product [Homo sapiens]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|344233011|gb|EGV64884.1| hypothetical protein CANTEDRAFT_121017 [Candida tenuis ATCC 10573]
Length = 1668
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 35 YTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGH 94
Y + S+ E +++D +++C IC I LT CGH +C C+ L N CP C
Sbjct: 1299 YLQSLSSPEQSSTDIDDNLMCIICRTTITIGSLTPCGHKYCKDCLEQWLSNHRSCPVCKS 1358
Query: 95 YLTNNQLYPNF 105
+T + +Y NF
Sbjct: 1359 IITTSSIY-NF 1368
>gi|41055965|ref|NP_956431.1| E3 ubiquitin-protein ligase RAD18 [Danio rerio]
gi|27881894|gb|AAH44430.1| RAD18 homolog (S. cerevisiae) [Danio rerio]
gi|182892082|gb|AAI65800.1| Rad18 protein [Danio rerio]
Length = 426
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
+D + CPIC + + + +T C H+FC +CI L K CP C T L N LLD
Sbjct: 19 MDTLLRCPICFEFLNISMMTQCSHNFCSLCIRKFLSYKLLCPVCNSPSTEQDLRNNRLLD 78
Query: 109 KLLKK-TSARQ 118
L++ +ARQ
Sbjct: 79 DLVQSFQTARQ 89
>gi|395842885|ref|XP_003794238.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Otolemur garnettii]
Length = 487
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V V EL+ + CPIC+++ KE + CGHS+C C+++ H K CP C + +
Sbjct: 4 QVRVLELEDQLQCPICLEVFKEPLMLQCGHSYCKDCLVSLSCHQDAKLRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|396465588|ref|XP_003837402.1| hypothetical protein LEMA_P036360.1 [Leptosphaeria maculans JN3]
gi|312213960|emb|CBX93962.1| hypothetical protein LEMA_P036360.1 [Leptosphaeria maculans JN3]
Length = 564
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 3 EVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQII 62
+ S PV P P+ ++ P TD TS G ++ + C +C + +
Sbjct: 58 QTSYHPVPPITPPESLMDTSYDLPDSTDWLL-------TSLPGFEAVEAALRCEVCKEFL 110
Query: 63 KEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKT 122
+T+C H+FC +CI + CP C ++++L PN + +++ +
Sbjct: 111 SNPVITSCSHTFCSICIRRCITADGKCPSCKTGCSSDKLTPNIAVREVVMR--------- 161
Query: 123 ASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAE 164
F++A + ++ + + + + S +KRK+E E E
Sbjct: 162 ------FQEARPKALELARADKEDTVEMPSGQKRKLEDTEIE 197
>gi|119589175|gb|EAW68769.1| tripartite motif-containing 22, isoform CRA_b [Homo sapiens]
gi|119589176|gb|EAW68770.1| tripartite motif-containing 22, isoform CRA_b [Homo sapiens]
gi|325003972|gb|ADY69767.1| tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|383421039|gb|AFH33733.1| breast cancer type 1 susceptibility protein isoform 1 [Macaca
mulatta]
Length = 1863
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIIHAFQL 95
>gi|169234602|ref|NP_001108421.1| breast cancer type 1 susceptibility protein homolog [Macaca
mulatta]
gi|55976415|sp|Q6J6I9.1|BRCA1_MACMU RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479018|gb|AAT44833.1| breast cancer type 1 [Macaca mulatta]
Length = 1863
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIIHAFQL 95
>gi|355754208|gb|EHH58173.1| hypothetical protein EGM_07963 [Macaca fascicularis]
Length = 1863
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIIHAFQL 95
>gi|157777579|gb|ABV69908.1| TRIM22 [Gorilla gorilla]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CPIC++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|344285136|ref|XP_003414319.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Loxodonta africana]
Length = 761
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C +++T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNHITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|75875129|gb|ABA29229.1| breast cancer 1 early onset [Homo sapiens]
gi|94315232|gb|ABF14462.1| early onset breast cancer 1 [Homo sapiens]
Length = 1822
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|401882799|gb|EJT47043.1| hypothetical protein A1Q1_04286 [Trichosporon asahii var. asahii
CBS 2479]
Length = 256
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 42 SEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI---ITHLRNKSDCPCCGHYLTN 98
S+ + LDK +LCPIC ++ CGHSFC CI K+ CP C T
Sbjct: 20 SQPQLRRLDKALLCPICKELFDHPVSIGCGHSFCSKCIRGFFASTTKKTACPTCSDPQTE 79
Query: 99 NQLYPNFLLDKLLK 112
+ N +L+++ K
Sbjct: 80 GSIRRNRVLEEIPK 93
>gi|326504044|dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 935
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+S+L +++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 320 LSDLPQELRCPLCKEVMKDAVLTSKCCFKSFCDKCIRDYIINKSMCVCGATSILADDLLP 379
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMS----LLSEKKRKM 158
N K L++T +R + + S EN G V V++++S + L S
Sbjct: 380 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESALPVPHKLRSPAVSAA 429
Query: 159 EQEEAERNMQI 169
+EE + M I
Sbjct: 430 SKEEPKAPMPI 440
>gi|53794093|gb|AAU93634.1| breast and ovarian cancer susceptibility protein [Homo sapiens]
Length = 1841
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|195574827|ref|XP_002105385.1| GD17676 [Drosophila simulans]
gi|194201312|gb|EDX14888.1| GD17676 [Drosophila simulans]
Length = 378
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 488 SDDCKV 493
S D +
Sbjct: 131 SQDGTI 136
>gi|75874794|gb|ABA29217.1| breast cancer 1 early onset [Homo sapiens]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|326931128|ref|XP_003211686.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Meleagris
gallopavo]
Length = 818
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
++ + L+ +LCPIC+++ KE + CGHS+C C+++ L + CP C + +
Sbjct: 4 KMSIDNLEDQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQFLCPVCRKSVDCS 63
Query: 100 QLYPNFLLDKLLKKTSAR 117
PN L ++++ +R
Sbjct: 64 ASPPNVTLARIIEALQSR 81
>gi|6552299|ref|NP_009225.1| breast cancer type 1 susceptibility protein isoform 1 [Homo
sapiens]
gi|728984|sp|P38398.2|BRCA1_HUMAN RecName: Full=Breast cancer type 1 susceptibility protein; AltName:
Full=RING finger protein 53
gi|555932|gb|AAA73985.1| breast and ovarian cancer susceptibility [Homo sapiens]
gi|1698399|gb|AAC37594.1| BRCA1 [Homo sapiens]
gi|30039659|gb|AAP12647.1| breast cancer 1, early onset [Homo sapiens]
gi|75874527|gb|ABA29208.1| breast cancer 1 early onset [Homo sapiens]
gi|75874617|gb|ABA29211.1| breast cancer 1 early onset [Homo sapiens]
gi|75874675|gb|ABA29214.1| breast cancer 1 early onset [Homo sapiens]
gi|75874871|gb|ABA29220.1| breast cancer 1 early onset [Homo sapiens]
gi|75874961|gb|ABA29223.1| breast cancer 1 early onset [Homo sapiens]
gi|75875069|gb|ABA29226.1| breast cancer 1 early onset [Homo sapiens]
gi|168278014|dbj|BAG10985.1| breast cancer type 1 susceptibility protein [synthetic construct]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|297701026|ref|XP_002827527.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Pongo abelii]
gi|297701028|ref|XP_002827528.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Pongo abelii]
Length = 1884
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|291384848|ref|XP_002709100.1| PREDICTED: TNF receptor-associated factor 6 [Oryctolagus cuniculus]
Length = 540
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|449283611|gb|EMC90216.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 37 AAASTSEVGVSELDK--DMLCPICMQIIK-EAFLTACGHSFCYMCIITHLRNKSDCPCC 92
AA+++ E + LD +++CPIC I +A ++ CGH FCY CI+ R ++ CP C
Sbjct: 88 AASTSQEPQATPLDASDNLMCPICQDSIHDQASVSWCGHLFCYACILEWSRRRAVCPIC 146
>gi|55976416|sp|Q6J6J0.1|BRCA1_PONPY RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479020|gb|AAT44834.1| breast cancer type 1 [Pongo pygmaeus]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|119581333|gb|EAW60929.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581337|gb|EAW60933.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581339|gb|EAW60935.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|1651195|dbj|BAA12705.1| TRAF6 [Mus musculus]
Length = 530
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|61365365|gb|AAX42696.1| breast cancer 1 early onset [synthetic construct]
Length = 1864
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|61355355|gb|AAX41131.1| breast cancer 1 early onset [synthetic construct]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|410973582|ref|XP_003993227.1| PREDICTED: TNF receptor-associated factor 6 [Felis catus]
Length = 488
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCRACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|237681119|ref|NP_009231.2| breast cancer type 1 susceptibility protein isoform 2 [Homo
sapiens]
Length = 1884
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|409051912|gb|EKM61388.1| hypothetical protein PHACADRAFT_247951 [Phanerochaete carnosa
HHB-10118-sp]
Length = 651
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN 85
P+ + A + +S SE GV M CPIC+ +T CGH FC+ CI+ H N
Sbjct: 100 PRSSAAVSTANGESSKSEEGV------MSCPICLSPPTSPRMTRCGHIFCFPCIL-HYLN 152
Query: 86 KSD------CPCCGHYLTNNQL 101
SD CP C +T QL
Sbjct: 153 TSDNLKWVRCPICLDSVTEKQL 174
>gi|353441749|gb|AEQ98814.1| breast and ovarian cancer sususceptibility protein 1 [Homo sapiens]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|410730717|ref|XP_003980179.1| hypothetical protein NDAI_0G05200 [Naumovozyma dairenensis CBS 421]
gi|401780356|emb|CCK73503.1| hypothetical protein NDAI_0G05200 [Naumovozyma dairenensis CBS 421]
Length = 1586
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 9 VVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLT 68
+V ++ MK + + T+ Y + +T + + + +K+ C IC+ I + +
Sbjct: 1222 IVGKIRESMKSNVIENTISTTETRIKYLTSLNTIKDSIGQ-NKEFQCTICLDAITKGCML 1280
Query: 69 ACGHSFCYMCIITHLRNKSDCPCCGH 94
CGH FC CI L+ ++ CP C H
Sbjct: 1281 KCGHFFCEDCIYDWLQTRTICPICKH 1306
>gi|395749084|ref|XP_003778880.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Pongo abelii]
Length = 1863
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|440803902|gb|ELR24785.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 206
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY--LTNNQLYPNFLLDK 109
D +CP+C ++I + T CGH+FC +C+ L K+ CP C L++ Q N L+
Sbjct: 17 DFMCPVCTELIYKPVTTPCGHTFCEVCLAMALAYKAKCPMCRETCGLSHAQFKVNVLMAA 76
Query: 110 LLKKTSARQISKTASPLENFRQALQQG 136
+++++ K A +E ++QG
Sbjct: 77 IIEQSFGDLYKKRAQEMEKQALVVRQG 103
>gi|156372854|ref|XP_001629250.1| predicted protein [Nematostella vectensis]
gi|156216246|gb|EDO37187.1| predicted protein [Nematostella vectensis]
Length = 701
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 426 SKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLV 485
+++ LSW+ +R+ +S Y+G VWDV T Q + Y H R SV +S +P ++
Sbjct: 620 GRVTALSWSPHHPDRLVTSSYDGSAQVWDVETNQPIANYRGHVGRVMSVCWSYLDPDVVF 679
Query: 486 SGSDDCKV 493
SG +D V
Sbjct: 680 SGGEDGTV 687
>gi|119581341|gb|EAW60937.1| breast cancer 1, early onset, isoform CRA_k [Homo sapiens]
Length = 1496
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|119581338|gb|EAW60934.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
gi|119581345|gb|EAW60941.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
Length = 1822
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|443685943|gb|ELT89389.1| hypothetical protein CAPTEDRAFT_219532 [Capitella teleta]
Length = 337
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C
Sbjct: 25 ALTDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNKECPTC 84
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 85 RKKLVSKRSLRPDPNFDALISK 106
>gi|322791422|gb|EFZ15854.1| hypothetical protein SINV_05766 [Solenopsis invicta]
Length = 176
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNNQLYPNFLLDKLLKK 113
CPIC+ ++ LT+CGH FC CI T L+ K CP G L + L+P+
Sbjct: 40 CPICLTWLRNPVLTSCGHKFCSQCIHTWLKKKGACCPVDGQPLKSEDLFPDLY------- 92
Query: 114 TSARQIS--KTASPLENFRQALQQGCGVSVKEIDSLMSL 150
++R+IS +T+ + F GC V + +D M +
Sbjct: 93 -TSREISQKRTSCVYQQF------GCEVKLSPVDMEMHI 124
>gi|38348246|ref|NP_033450.2| TNF receptor-associated factor 6 [Mus musculus]
gi|288558832|sp|P70196.2|TRAF6_MOUSE RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|38173732|gb|AAH60705.1| TNF receptor-associated factor 6 [Mus musculus]
gi|74206917|dbj|BAE33263.1| unnamed protein product [Mus musculus]
gi|148695709|gb|EDL27656.1| Tnf receptor-associated factor 6, isoform CRA_a [Mus musculus]
gi|148695710|gb|EDL27657.1| Tnf receptor-associated factor 6, isoform CRA_a [Mus musculus]
Length = 530
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|195062083|ref|XP_001996129.1| GH13986 [Drosophila grimshawi]
gi|193891921|gb|EDV90787.1| GH13986 [Drosophila grimshawi]
Length = 784
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ + ++ Y EHE+ A +V F TEP++L+SG
Sbjct: 74 VAWSTLDSNILATAATNGVVSVWDLSKFGRHKQLLVYNEHERTAHTVTFHSTEPNILISG 133
Query: 488 SDDCKV 493
S D +
Sbjct: 134 SQDGTI 139
>gi|332260951|ref|XP_003279544.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Nomascus leucogenys]
gi|441677725|ref|XP_004092761.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|410266754|gb|JAA21343.1| breast cancer 1, early onset [Pan troglodytes]
Length = 760
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|332260953|ref|XP_003279545.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Nomascus leucogenys]
gi|441677731|ref|XP_004092762.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1884
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|126309020|ref|XP_001364471.1| PREDICTED: tripartite motif-containing protein 58-like [Monodelphis
domestica]
Length = 565
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 37 AAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-------- 88
AAA + V L ++ CPIC+ +++ CGHSFC C IT KSD
Sbjct: 96 AAAMATGFPVERLKEEAKCPICLDFLQDPVSVDCGHSFCLQC-ITEFCEKSDSSQGSVYS 154
Query: 89 CPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASP-----LENFRQALQQGC 137
CP C N PN L +++ S +Q+ ++SP E+ R+ L C
Sbjct: 155 CPQCRSQFHQNSFRPNRQLASMVE--SIKQLGLSSSPKKTWLCESHREELNYFC 206
>gi|312376122|gb|EFR23307.1| hypothetical protein AND_13125 [Anopheles darlingi]
Length = 449
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 25 APQETDAAAAYTAAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIIT 81
APQE A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT
Sbjct: 22 APQE--------AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 73
Query: 82 HLRN-KSDCPCCGHYLTNNQ-LYPNFLLDKLLKK 113
LR+ +CP C L + + L P+ D L+ K
Sbjct: 74 ALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISK 107
>gi|395504948|ref|XP_003756808.1| PREDICTED: gem-associated protein 5 [Sarcophilus harrisii]
Length = 1591
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS------KLSCLSWNKFSKNRIAS 443
L A+ + I V + SV+ + + E P R+ K++ L+W+ R+ S
Sbjct: 671 LIASGSNNAVIYVHNLKSVIESTPESPVTITE-PFRTLSGHTAKITSLAWSPHHDGRLVS 729
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ Y+G V VWDV ++ + Y H R V +S +P + SG+DD
Sbjct: 730 ACYDGTVQVWDVLREEPLCNYRGHRGRLLCVQWSPLDPDSIFSGADD 776
>gi|157427701|ref|NP_001098756.1| TNF receptor-associated factor 6 [Sus scrofa]
gi|288559148|sp|A7XUJ6.1|TRAF6_PIG RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|156530444|gb|ABU75303.1| TNF receptor-associated factor 6 [Sus scrofa]
Length = 541
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLLKKT 114
++L T
Sbjct: 125 KREILSLT 132
>gi|410358541|gb|JAA44608.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|38503185|sp|Q9GKK8.2|BRCA1_PANTR RecName: Full=Breast cancer type 1 susceptibility protein homolog
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|410293720|gb|JAA25460.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|410210842|gb|JAA02640.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|119581327|gb|EAW60923.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
gi|119581342|gb|EAW60938.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
Length = 721
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|113865841|ref|NP_001038958.1| breast cancer type 1 susceptibility protein homolog [Pan
troglodytes]
gi|37953275|gb|AAR04849.1| BRCA1 [Pan troglodytes]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|12003222|gb|AAG43492.1|AF207822_1 BRCA1 [Pan troglodytes]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|1498737|gb|AAC00049.1| Brca1-delta11b [Homo sapiens]
Length = 759
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|410266746|gb|JAA21339.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266748|gb|JAA21340.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266750|gb|JAA21341.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266752|gb|JAA21342.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266756|gb|JAA21344.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|119581328|gb|EAW60924.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
gi|119581340|gb|EAW60936.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
Length = 1598
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|55976414|sp|Q6J6I8.1|BRCA1_GORGO RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479022|gb|AAT44835.1| breast cancer type 1 [Gorilla gorilla]
Length = 1863
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|119581334|gb|EAW60930.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
gi|119581344|gb|EAW60940.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
Length = 1624
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|119581326|gb|EAW60922.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
gi|119581330|gb|EAW60926.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
Length = 719
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|148225312|ref|NP_001086348.1| TNF receptor-associated factor 6-B [Xenopus laevis]
gi|82236068|sp|Q6DJN2.1|TRF6B_XENLA RecName: Full=TNF receptor-associated factor 6-B; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|49522101|gb|AAH75143.1| MGC81955 protein [Xenopus laevis]
Length = 556
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ LR+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHKCPVDNEILMENQLFPDNFA 125
Query: 107 LDKLL 111
++L
Sbjct: 126 KREIL 130
>gi|148229449|ref|NP_001089863.1| TNF receptor-associated factor 6-A [Xenopus laevis]
gi|80477229|gb|AAI08563.1| MGC131035 protein [Xenopus laevis]
Length = 556
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 27 QETDAAAAYTAAASTSEVGVSE-----------LDKDMLCPICMQIIKEAFLTACGHSFC 75
++ D+ +A + +T + V E L+ CPIC+ ++EA T CGH FC
Sbjct: 33 EDADSPSAGLPSGTTQNLDVEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFC 92
Query: 76 YMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFLLDKLL 111
CI+ LRN CP L QL+P NF ++L
Sbjct: 93 KACILKSLRNAGHKCPVDNEILMEKQLFPDNFAKREIL 130
>gi|123916477|sp|Q3MV19.1|TRF6A_XENLA RecName: Full=TNF receptor-associated factor 6-A; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|75674194|dbj|BAE44508.1| TRAF6 [Xenopus laevis]
Length = 556
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 27 QETDAAAAYTAAASTSEVGVSE-----------LDKDMLCPICMQIIKEAFLTACGHSFC 75
++ D+ +A + +T + V E L+ CPIC+ ++EA T CGH FC
Sbjct: 33 EDADSPSAGLPSGTTQNLDVEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFC 92
Query: 76 YMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFLLDKLL 111
CI+ LRN CP L QL+P NF ++L
Sbjct: 93 KACILKSLRNAGHKCPVDNEILMEKQLFPDNFAKREIL 130
>gi|402900432|ref|XP_003913179.1| PREDICTED: LOW QUALITY PROTEIN: breast cancer type 1 susceptibility
protein homolog [Papio anubis]
Length = 1873
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
+S + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 1 MSLMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 60
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 61 ESTRFSQLVEELLKIIHAFQL 81
>gi|224050199|ref|XP_002197969.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Taeniopygia guttata]
Length = 194
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 55 CPICMQIIKEAFL-------TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM + E T CGH FC C+ LRN + CP C LT+ Q +P ++
Sbjct: 136 CPICMDVYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 194
>gi|237681123|ref|NP_009229.2| breast cancer type 1 susceptibility protein isoform 4 [Homo
sapiens]
gi|119581329|gb|EAW60925.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
gi|119581336|gb|EAW60932.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
Length = 759
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|391326829|ref|XP_003737913.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Metaseiulus
occidentalis]
Length = 336
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 41 TSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYL 96
++E+ VS+ L +++CPIC+ I+K T C H FC CIIT LR+ + +CP C L
Sbjct: 31 STEIAVSQRSLHSELMCPICLDILKTTMTTKECLHRFCQDCIITALRSGNKECPTCRKKL 90
Query: 97 TNNQLY---PNFLLDKLLKK 113
+ + PNF D L+ K
Sbjct: 91 VSKRSLRADPNF--DALIAK 108
>gi|350425025|ref|XP_003493989.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Bombus
impatiens]
Length = 380
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A ++E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|119581343|gb|EAW60939.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
gi|119581346|gb|EAW60942.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
Length = 680
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|397485727|ref|XP_003813992.1| PREDICTED: breast cancer type 1 susceptibility protein homolog [Pan
paniscus]
Length = 1849
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|396081577|gb|AFN83193.1| putative zinc finger domain-containing protein [Encephalitozoon
romaleae SJ-2008]
Length = 101
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 23 DTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH 82
D+ D + Y+ + S+ G +LC IC ++ KE +T CGHSFC +C I
Sbjct: 28 DSCKYSHDRSMGYSESPVVSDTG-------LLCGICRKLYKERVVTECGHSFCSLCAIRK 80
Query: 83 LRNKSDCPCCG 93
+N +C CG
Sbjct: 81 YQNGDECGVCG 91
>gi|350419601|ref|XP_003492240.1| PREDICTED: E3 ubiquitin-protein ligase RAD18-like [Bombus
impatiens]
Length = 693
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+G+ ++ ++C IC + + + +T+C H++C +CI +L K+ CP C L
Sbjct: 7 IGLKHIENLLVCGICYEFMDTSVMTSCSHNYCSLCIRKYLHYKTQCPACFAETFEKDLRK 66
Query: 104 NFLLDKLL 111
N +LD+++
Sbjct: 67 NKVLDEII 74
>gi|119623663|gb|EAX03258.1| tripartite motif-containing 31, isoform CRA_b [Homo sapiens]
Length = 267
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|116283824|gb|AAH30969.1| BRCA1 protein [Homo sapiens]
Length = 657
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|449455962|ref|XP_004145719.1| PREDICTED: uncharacterized protein LOC101209296 [Cucumis sativus]
Length = 382
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 1 MDEVSTEPVVPAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVG----VSELDKDMLCP 56
+D TEP V P +P S + +++D+ A AS+ + +L +++ C
Sbjct: 94 LDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLPCMDKLREELSCA 153
Query: 57 ICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-----CPCCGHYLTNNQ 100
IC++I E T CGHSFC C LR+ +D CP C ++N +
Sbjct: 154 ICLEICFEPSTTPCGHSFCKKC----LRSAADKCGKRCPKCRQLISNGR 198
>gi|37537746|gb|AAQ92977.1| IRIS [Homo sapiens]
Length = 1399
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|344238120|gb|EGV94223.1| TNF receptor-associated factor 6 [Cricetulus griseus]
Length = 508
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 42 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 101
Query: 107 LDKLLKKT 114
++L T
Sbjct: 102 KREILSLT 109
>gi|302784943|ref|XP_002974243.1| hypothetical protein SELMODRAFT_414577 [Selaginella moellendorffii]
gi|300157841|gb|EFJ24465.1| hypothetical protein SELMODRAFT_414577 [Selaginella moellendorffii]
Length = 946
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
+ +++ CPIC+ + ++A + +C H FC CI+T L+ CP C T ++ P+
Sbjct: 5 LERFGRELKCPICLSLFQQAAVLSCTHCFCKPCILTSLKGMPFCPVCKVPATRREVRPSP 64
Query: 106 LLDKLL 111
+D ++
Sbjct: 65 KMDNVV 70
>gi|62751431|ref|NP_001015868.1| ring finger protein 112 [Xenopus (Silurana) tropicalis]
gi|59861904|gb|AAH90385.1| ring finger protein 112 [Xenopus (Silurana) tropicalis]
Length = 610
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 30 DAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD- 88
D+ AA E S L +D+ C IC+ + + ACGH+FC CI TH
Sbjct: 40 DSGAASAQQPQYREDSFSSLTEDITCSICLDDLTDPVYIACGHTFCRGCITTHWGTPHPH 99
Query: 89 ---CPCCGHYLTNNQLYPNFLLDKLLKK 113
CP C N + P++ L L+ K
Sbjct: 100 GYLCPECRASCPRNHIVPDYRLGNLVSK 127
>gi|397489232|ref|XP_003815636.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50
[Pan paniscus]
Length = 409
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL + CPIC+++ KE + CGHS+C C+++ HL + CP C + +
Sbjct: 4 QVSLPELXDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGS 63
Query: 100 QLYPNFLLDKLLK 112
PN L ++++
Sbjct: 64 SSPPNVSLARVIE 76
>gi|449270808|gb|EMC81459.1| RING finger protein 4, partial [Columba livia]
Length = 190
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN + CP C LT+ Q +P ++
Sbjct: 132 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 190
>gi|354477533|ref|XP_003500974.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Cricetulus griseus]
Length = 484
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNNQ 100
V V EL + CPIC+++ KE + CGHS+C C+ + HL ++ CP C + +
Sbjct: 5 VTVPELHDQLQCPICLEVFKEPLMLQCGHSYCKGCLDSLSQHLDSELRCPVCRQSVDCSS 64
Query: 101 LYPNFLLDKLL 111
PN L +++
Sbjct: 65 SLPNVSLARVI 75
>gi|357143132|ref|XP_003572814.1| PREDICTED: uncharacterized protein LOC100823388 [Brachypodium
distachyon]
Length = 948
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 352 VGDLPPELRCPLCKEVMKDAVLTSKCCFKSFCDKCIRDYIINKSMCVCGATSILADDLLP 411
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V +++++S + +
Sbjct: 412 N----KTLRETISRILEAPPTSSTEN------PGSMVQIQDMESALPI 449
>gi|358056200|dbj|GAA97940.1| hypothetical protein E5Q_04620 [Mixia osmundae IAM 14324]
Length = 439
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 16 DMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDML--CPICMQIIKEAFLTACGHS 73
D +P+S T + D A A T E +E + C +C+ ++ T CGH+
Sbjct: 346 DGRPASIMTFDPDADNQAEKAEEAQTEEDADAEPEDSHARRCTLCLGPRRDPASTECGHT 405
Query: 74 FCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
FC+ CI+ R K +CP C +T ++L P + L
Sbjct: 406 FCWECIVGWAREKPECPLCRQSVTLSRLLPVYNL 439
>gi|118100004|ref|XP_415709.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Gallus gallus]
Length = 492
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
++ + L+ +LCPIC+++ KE + CGHS+C C+++ L + CP C + +
Sbjct: 4 KMSIDNLEDQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQLLCPVCRKSVDCS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTA--------SPLENF----RQALQQGCGVSVKEIDSL 147
PN L ++++ +R ++ +PL F R+ + CG
Sbjct: 64 ASPPNVTLARIIEALQSRGETEPTPESCPTHDNPLSLFCEADREVICGLCGTIGNHKQHK 123
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFLH-CLRKQKVDELKEIQTDLHYIKEDINAVERHR 206
++ +S +M++E + +LL +H C K+ +DEL I I
Sbjct: 124 ITPISTAYCRMKEE-----LSVLLTDVHRC--KRNLDELFS-----KLINNKIRIANEAD 171
Query: 207 IDLYRARDRYSVKLRMLGDDSNTRKSWLSSIDKNSSGIITS 247
+ + R + R + ++ T +L S++ ++ +ITS
Sbjct: 172 VFKWVIRKEFEELHRYIDEEKAT---FLESVEGKAAQLITS 209
>gi|145519772|ref|XP_001445747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413213|emb|CAK78350.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
+G+ ++++ +LC IC ++ CGH+FC C++ ++ K CP C H+L N
Sbjct: 8 MGLQQVNQHLLCSICREVFYNPIRATCGHTFCGTCLVRWIQQKKSCPLCRHHLERN 63
>gi|405976877|gb|EKC41356.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A +E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDALISK 108
>gi|426368015|ref|XP_004051013.1| PREDICTED: TNF receptor-associated factor 6 [Gorilla gorilla
gorilla]
Length = 471
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|426348156|ref|XP_004041705.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Gorilla gorilla gorilla]
Length = 1399
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|448516398|ref|XP_003867561.1| hypothetical protein CORT_0B04170 [Candida orthopsilosis Co 90-125]
gi|380351900|emb|CCG22124.1| hypothetical protein CORT_0B04170 [Candida orthopsilosis]
Length = 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP-- 103
+S++ + C IC +I+ T CGHSFCY C+ +NK +CP C H + Q P
Sbjct: 22 LSKITNSLECSICSEIMLAPMTTECGHSFCYECLHQWFKNKINCPTCRHEI---QTKPAL 78
Query: 104 NFLLDKLLKKTSARQISKTASP-LENF 129
N L+++ K + I P LE+F
Sbjct: 79 NMKLNEVSKSLAELIIDARLDPNLESF 105
>gi|440799182|gb|ELR20243.1| K+ channel tetramerisation subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 570
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 378 IVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSK---------- 427
+++ I+FD FA + +S RI ++ + S VN V +P +S
Sbjct: 271 VITCIDFDPTGDYFAASQLSERISIYSYTSFVNARESVPLAAQTLPIKSNMRWVVMPDNS 330
Query: 428 ------------LSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVD 475
L+ LSWNK ++ +A D++G + +W+ Q ++ R W++D
Sbjct: 331 NLDHTWLVADCLLTTLSWNKSVRHLLAHGDHDGNICLWNTEIAQFASASDDRTVRLWTID 390
Query: 476 FSRTEPSMLVSGSDDCKVLY 495
+T + + S + C V Y
Sbjct: 391 -DKTSTASIASKATVCCVRY 409
>gi|414871337|tpg|DAA49894.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
Length = 1019
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 324 VGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 383
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V V++++S + +
Sbjct: 384 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESALPV 421
>gi|405966171|gb|EKC31483.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A +E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDALISK 108
>gi|332260959|ref|XP_003279548.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 5 [Nomascus leucogenys]
Length = 699
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|242039613|ref|XP_002467201.1| hypothetical protein SORBIDRAFT_01g021330 [Sorghum bicolor]
gi|241921055|gb|EER94199.1| hypothetical protein SORBIDRAFT_01g021330 [Sorghum bicolor]
Length = 886
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C +++K+A LT+ C SFC CI +L NKS C C + + L P
Sbjct: 284 VGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYLINKSMCVCGATSILADDLLP 343
Query: 104 NFLLDKLLKK 113
N L + + +
Sbjct: 344 NKTLRETINR 353
>gi|348562775|ref|XP_003467184.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cavia porcellus]
Length = 1748
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 15/116 (12%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C +T L +
Sbjct: 17 MQKVLECPICLELIKEPVSTKCDHIFCKFCMLKFLDQKKGLSQCPLCKSSITKRSLQEST 76
Query: 106 LLDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQE 161
+L+++ L+ A + C V+ DSL S ++++E
Sbjct: 77 RFGQLVEE------------LQKTIHAFELDCSSQVENSDSLSKKQSSSPERVKEE 120
>gi|237681125|ref|NP_009230.2| breast cancer type 1 susceptibility protein isoform 5 [Homo
sapiens]
gi|47939870|gb|AAH72418.1| BRCA1 protein [Homo sapiens]
Length = 699
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|62529015|gb|AAX84803.1| TRIM50 [Macaca fuscata]
Length = 103
Score = 52.8 bits (125), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCC 92
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLRCGHSYCKGCLVSLSCHLDAELRCPVC 56
>gi|297661171|ref|XP_002809149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 2 [Pongo
abelii]
Length = 461
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++ A Q S+ S
Sbjct: 66 RFNSLLRNLVENIQALQASEVQS 88
>gi|426245316|ref|XP_004016459.1| PREDICTED: TNF receptor-associated factor 6 [Ovis aries]
Length = 542
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLL 111
++L
Sbjct: 125 KREIL 129
>gi|403363185|gb|EJY81333.1| hypothetical protein OXYTRI_21156 [Oxytricha trifallax]
Length = 276
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDML-CPICMQIIKEAFLTACGHSFCYMCIITHLR 84
PQ+ TA+A ++ G + KD CPIC++II E +T C H FC C L+
Sbjct: 8 PQKPVPQQKVTASAGSTTGGTVKKGKDDFECPICLEIIAEPVMTPCKHLFCLSCQKQVLQ 67
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLD 108
+ CP C + Q P LD
Sbjct: 68 LNATCPMCRRQF-DEQFVPKIDLD 90
>gi|345486954|ref|XP_003425595.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nasonia
vitripennis]
Length = 401
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|291406195|ref|XP_002719221.1| PREDICTED: breast cancer 1, early onset [Oryctolagus cuniculus]
Length = 761
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLKKTSARQISKTASPLEN 128
L+++LLK A ++ T P N
Sbjct: 78 RFSQLVEELLKMIQAFELD-TGLPFAN 103
>gi|194883290|ref|XP_001975736.1| GG22477 [Drosophila erecta]
gi|190658923|gb|EDV56136.1| GG22477 [Drosophila erecta]
Length = 94
Score = 52.8 bits (125), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 50 DKDMLCPICMQIIK--EAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
D CPICM+ ++ + T CGH FC+ CI +R+ CP C LT Q+ P FL
Sbjct: 36 DDPYRCPICMEYVRRRQPGATKCGHVFCFGCIDKAIRSFEKCPICNRQLTIGQILPIFL 94
>gi|406700550|gb|EKD03716.1| hypothetical protein A1Q2_01942 [Trichosporon asahii var. asahii
CBS 8904]
Length = 598
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 42 SEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI---ITHLRNKSDCPCCGHYLTN 98
S+ + LDK +LCPIC ++ CGHSFC CI K+ CP C T
Sbjct: 20 SQPQLRRLDKALLCPICKELFDHPVSIGCGHSFCSKCIRGFFASTTKKTACPTCSDPQTE 79
Query: 99 NQLYPNFLLDKL 110
+ N +L+++
Sbjct: 80 GSIRRNRVLEEM 91
>gi|109107583|ref|XP_001104479.1| PREDICTED: tripartite motif-containing protein 34-like [Macaca
mulatta]
Length = 885
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR------- 84
A A A TS V V ++ +D+ CPIC++++ E CGHSFC CI + R
Sbjct: 64 AGARRVATMTSPVLV-DIREDVTCPICLELLTEPLSIDCGHSFCQACITPNSRESMIGQE 122
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKKT------SARQISKTASPLENFRQALQQGCG 138
+ CP C L PN L ++++ +Q+ A + + LQ C
Sbjct: 123 GERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLK--AVLCADHGEKLQLFCQ 180
Query: 139 VSVKEIDSLM----------SLLSE--------------KKRKMEQEEAERNMQILLDFL 174
K I L + L E KK K E++EAE+ + +
Sbjct: 181 EHGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKK 240
Query: 175 HCLRKQKVDELKEIQTDLHYIKEDINAVER 204
C + Q E IQT+ + ++ ++ VE+
Sbjct: 241 TCWKNQMEPERHRIQTEFNQLRNILDRVEQ 270
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSD 88
+A AS + V E ++ CPIC++++ E CGHS C CI +T KS
Sbjct: 396 SAMASKILLNVQE---EVTCPICLELLTEPLSLGCGHSLCRACITVTNKEAVTSPGGKSS 452
Query: 89 CPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
CP CG + L N L ++++ ++S
Sbjct: 453 CPVCGTSYSFENLQTNRHLTNIVERLKEVKLS 484
>gi|78070589|gb|AAI06746.1| BRCA1 protein [Homo sapiens]
Length = 473
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLKKTSARQI 119
+ L+++LLK A Q+
Sbjct: 75 ESTRFSQLVEELLKIICAFQL 95
>gi|292625693|ref|XP_001339880.3| PREDICTED: gem-associated protein 5 [Danio rerio]
Length = 1446
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS------KLSCLSWNKFSKNRIAS 443
L A+ + I + D S V P++ V E P R+ K++ L+W+ + +
Sbjct: 588 LLASGSSNATIYIHDLRSAVESPSESPVSVTE-PFRTLSGHTNKITDLAWSPHHDGHLVT 646
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
Y+G VWDV ++ V Y H R V +S P ++ +G DD
Sbjct: 647 VCYDGTAQVWDVLKEEPVCNYRGHSGRLLCVQWSAVHPDLIWTGGDD 693
>gi|354470461|ref|XP_003497507.1| PREDICTED: TNF receptor-associated factor 6-like [Cricetulus
griseus]
Length = 530
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|444705695|gb|ELW47092.1| E3 ubiquitin-protein ligase TRIM31 [Tupaia chinensis]
Length = 490
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 42 SEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYLT 97
S+ ++L +++ CPICM I+K CGH+FC C IT SD CP C +
Sbjct: 3 SQQFANKLQEELTCPICMDILKGPVTVDCGHNFCLTC-ITQSAEMSDGSHKCPLC-NMPV 60
Query: 98 NNQLYPNFLLDKLLKKTSARQIS 120
N PN+LL L++K + S
Sbjct: 61 KNTYSPNWLLMNLIEKIGSMDFS 83
>gi|225441479|ref|XP_002279934.1| PREDICTED: uncharacterized protein LOC100260713 isoform 1 [Vitis
vinifera]
gi|359482169|ref|XP_003632722.1| PREDICTED: uncharacterized protein LOC100260713 [Vitis vinifera]
Length = 410
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGHYLTNNQLYP-----NFL 106
C IC+ + ++ +T CGH FC+ C+ L SD CP C +T + P N +
Sbjct: 134 CNICLDLARDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNVTPIYGRGNNI 193
Query: 107 LDKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEI 144
+ + + A +E+FRQ +Q+ G V+E+
Sbjct: 194 HEPEEDSSLKVPLRPHARRIESFRQTIQRNVGFPVEEM 231
>gi|403217578|emb|CCK72072.1| hypothetical protein KNAG_0I02880 [Kazachstania naganishii CBS
8797]
Length = 461
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
S+LD + C IC +K LT CGH+FC +CI + + CP C + L + L +FL
Sbjct: 20 SQLDSLLRCHICKDFLKVPVLTPCGHTFCSICIREAINKSAKCPLCLNELRESGLRGDFL 79
>gi|326531740|dbj|BAJ97874.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 562
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 16 DMKPSSTDTAPQETDAAAAYT-------------AAASTSEVGVSELDKD-------MLC 55
D+ P S++ P DAA + EVG E ++ C
Sbjct: 182 DLPPLSSEVQPLGHDAAVPVPHHEPAIDIVGDNKVTGNGVEVGAPEKSEERGKSVATFAC 241
Query: 56 PICMQIIKEAFLTACGHSFCYMCIITHLR---NKSDCPCCGHYLTNNQLYP------NFL 106
IC ++ E +T+CGH FC+ C+ L N +CP C +T + P N
Sbjct: 242 NICFEMAGEPVVTSCGHLFCWPCLYQWLNVYSNHKECPVCKGEVTEANITPIYGSRGNSC 301
Query: 107 LDKLLKKTSARQISKTASP------LENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQ 160
D +Q T P LE+FRQ Q +S + + +LS +R ++Q
Sbjct: 302 SDAEKAVEEGKQTGLTIPPRPHGNRLESFRQQFQHLRPMS-RRLGDPHGILSSWRRLLDQ 360
Query: 161 E 161
+
Sbjct: 361 Q 361
>gi|440911212|gb|ELR60914.1| hypothetical protein M91_01211 [Bos grunniens mutus]
Length = 520
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 43 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 102
Query: 107 LDKLL 111
++L
Sbjct: 103 KREIL 107
>gi|345486956|ref|XP_003425596.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 3 [Nasonia
vitripennis]
Length = 389
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|301782257|ref|XP_002926543.1| PREDICTED: TNF receptor-associated factor 6-like [Ailuropoda
melanoleuca]
Length = 541
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|157113563|ref|XP_001652000.1| peroxisomal targeting signal 2 receptor [Aedes aegypti]
gi|108877709|gb|EAT41934.1| AAEL006491-PA [Aedes aegypti]
Length = 802
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A SV F TE ++L+SG
Sbjct: 68 VAWSSLDSNILATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHSVAFHGTESNLLISG 127
Query: 488 SDDCKV 493
S D +
Sbjct: 128 SQDGTI 133
>gi|109066279|ref|XP_001110857.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Macaca
mulatta]
gi|355560555|gb|EHH17241.1| E3 ubiquitin-protein ligase TRIM50 [Macaca mulatta]
gi|355747585|gb|EHH52082.1| E3 ubiquitin-protein ligase TRIM50 [Macaca fascicularis]
Length = 488
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCC 92
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLRCGHSYCKGCLVSLSCHLDAELRCPVC 56
>gi|402863190|ref|XP_003895914.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Papio anubis]
Length = 488
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCC 92
+V + EL+ + CPIC+++ KE + CGHS+C C+++ HL + CP C
Sbjct: 4 QVSLPELEDRLQCPICLEVFKEPLMLRCGHSYCKGCLVSLSCHLDAELRCPVC 56
>gi|150866744|ref|XP_001386438.2| associated with histones/Spt16/Pob3 [Scheffersomyces stipitis CBS
6054]
gi|149388000|gb|ABN68409.2| associated with histones/Spt16/Pob3 [Scheffersomyces stipitis CBS
6054]
Length = 301
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN 98
+S++ ++ C IC + + F CGHSFCY C+ T NK +CP C H + N
Sbjct: 23 LSKITANIECTICNETMHVPFTVECGHSFCYDCLHTWFENKINCPTCRHNIEN 75
>gi|344284015|ref|XP_003413766.1| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 2-like [Loxodonta africana]
Length = 655
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLL 111
D C CM++ E T CGH+FC C L + CP CG L N ++ L+
Sbjct: 349 DFRCSFCMRLFFEPVTTPCGHTFCLKCFERSLNHAPRCPLCGETFPEFLLRRNLIITPLI 408
Query: 112 KKTSARQIS 120
++ +R +S
Sbjct: 409 EEIISRYLS 417
>gi|157115358|ref|XP_001652570.1| hypothetical protein AaeL_AAEL007167 [Aedes aegypti]
gi|108876942|gb|EAT41167.1| AAEL007167-PA [Aedes aegypti]
Length = 277
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 6 TEPVVPAVKPD------MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDK-DMLCPIC 58
T PVV ++ D + ++T +P++ AA++ + +E S + + CPIC
Sbjct: 167 TAPVVESISLDDTVAEPVPQTTTRQSPKKRITAASFVQPSPPAESPTSAVPSVSVTCPIC 226
Query: 59 MQII--KEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
++ I ++A T CGH FC CI ++ + CP C L +Q++P +
Sbjct: 227 LESIFHQQAASTVCGHLFCKNCITQEIQIRKKCPMCKRALKRHQVHPIYF 276
>gi|345486958|ref|XP_001608228.2| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nasonia
vitripennis]
Length = 379
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|340724527|ref|XP_003400633.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Bombus
terrestris]
gi|380021048|ref|XP_003694386.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 1 [Apis
florea]
Length = 380
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|302854404|ref|XP_002958710.1| hypothetical protein VOLCADRAFT_108265 [Volvox carteri f.
nagariensis]
gi|300255950|gb|EFJ40230.1| hypothetical protein VOLCADRAFT_108265 [Volvox carteri f.
nagariensis]
Length = 360
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 17/119 (14%)
Query: 11 PAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQII-----KEA 65
P +P+ P +E+++ AA A T V EL+ CP+C +++
Sbjct: 147 PKSEPNHNPG------RESESLAAQQGALDT--FLVKELESQNTCPVCYELMVPPQHAPV 198
Query: 66 FLTACGHSFCYMCIITHL-RN-KSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKT 122
L CGHSFC C+ H+ RN K+ CP C + + PN+ L +L+++ A++ S +
Sbjct: 199 MLFPCGHSFCGRCLEQHIDRNKKTQCPICRKKIESR--APNYSLQQLIQQVVAKKESAS 255
>gi|410895639|ref|XP_003961307.1| PREDICTED: uncharacterized protein LOC101064828 [Takifugu rubripes]
Length = 1279
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 37 AAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL----RNKSDCPCC 92
A A+ + G+S L + + CPIC+ I+ T C H FC CI L +NK++CP C
Sbjct: 4 AKAADVKKGISVLWESLQCPICLDILTAPVSTKCDHQFCKFCISKLLSNTKQNKANCPVC 63
Query: 93 GHYLTNNQLY--PNF 105
+T L P F
Sbjct: 64 KSKITKRSLQESPGF 78
>gi|355566601|gb|EHH22980.1| TNF receptor-associated factor 6 [Macaca mulatta]
Length = 538
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 80 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 139
Query: 107 LDKLL 111
++L
Sbjct: 140 KREIL 144
>gi|347965412|ref|XP_322003.5| AGAP001159-PA [Anopheles gambiae str. PEST]
gi|333470524|gb|EAA01612.5| AGAP001159-PA [Anopheles gambiae str. PEST]
Length = 803
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A SV F TE ++L+SG
Sbjct: 68 VAWSALDSNILATAATNGVVSVWDLSRFGRQKQLLVYNEHERTAHSVAFHGTEANLLISG 127
Query: 488 SDDCKV 493
S D +
Sbjct: 128 SQDGTI 133
>gi|307204964|gb|EFN83503.1| E3 ubiquitin-protein ligase RING1 [Harpegnathos saltator]
Length = 399
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C L
Sbjct: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 92 SKRSLRPDPNFDLLISK 108
>gi|198427796|ref|XP_002131818.1| PREDICTED: similar to Gem-associated protein 5 (Gemin5) [Ciona
intestinalis]
Length = 1329
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 418 PVVEMPTRS------KLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKR- 470
PVV P R+ +++ LSWN S+N++ S+ Y+G VWDV ++ V Y H+ R
Sbjct: 622 PVVTQPFRTLTGHCGRITSLSWNPDSQNQLVSASYDGTAQVWDVLDEEPVSNYRGHDGRL 681
Query: 471 ---AWSVDFSRTEPSMLV-SGSDDCKV 493
W E S L+ SG+DD V
Sbjct: 682 LCVVWRRKMDEDERSGLIYSGADDYAV 708
>gi|12275860|gb|AAG50165.1|AF230386_1 tripartite motif protein TRIM31 alpha [Homo sapiens]
Length = 425
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + + +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCPQC-ITQIGETSCGFFKCPLCKTSVRRDAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|387019313|gb|AFJ51774.1| TNF receptor-associated factor 6-like [Crotalus adamanteus]
Length = 546
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLENQLFPDNFA 125
Query: 107 LDKLLKKT 114
++L T
Sbjct: 126 KREILSLT 133
>gi|322796367|gb|EFZ18908.1| hypothetical protein SINV_06659 [Solenopsis invicta]
Length = 379
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|77736267|ref|NP_001029833.1| TNF receptor-associated factor 6 [Bos taurus]
gi|122146515|sp|Q3ZCC3.1|TRAF6_BOVIN RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|73587333|gb|AAI02523.1| TNF receptor-associated factor 6 [Bos taurus]
gi|83853856|gb|ABC47877.1| TNF receptor-associated factor 6 [Bos taurus]
gi|89357342|gb|ABD72516.1| TNF receptor-associated factor 6 [Bos taurus]
gi|296479725|tpg|DAA21840.1| TPA: TNF receptor-associated factor 6 [Bos taurus]
Length = 542
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLL 111
++L
Sbjct: 125 KREIL 129
>gi|332021896|gb|EGI62232.1| E3 ubiquitin-protein ligase RING2 [Acromyrmex echinatior]
Length = 379
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|328870711|gb|EGG19084.1| kin17-like protein [Dictyostelium fasciculatum]
Length = 695
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 34 AYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG 93
Y ++ V ++ +CPI +I++ +T CGH+FC C+ L + CP
Sbjct: 486 CYLLMCRAEDLFVDKVSIHFICPIGKGVIEDPIVTPCGHTFCNPCLQNWLNTRRQCPTDR 545
Query: 94 HYLTNNQLYPNFLLDKLL 111
+T+ QL PN+L+ +L
Sbjct: 546 LPVTHKQLIPNYLVLNIL 563
>gi|326919491|ref|XP_003206014.1| PREDICTED: e3 ubiquitin ligase RNF4-like isoform 1 [Meleagris
gallopavo]
Length = 194
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN + CP C LT+ Q +P ++
Sbjct: 136 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI 194
>gi|357126578|ref|XP_003564964.1| PREDICTED: uncharacterized WD repeat-containing protein
C17D11.16-like [Brachypodium distachyon]
Length = 500
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 425 RSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSML 484
RS + L+WNK +N +AS+ + V +WDV+ + V+ + H+ + SV +SR P +L
Sbjct: 264 RSSVLGLAWNKEVRNVLASASADKTVKIWDVSAGKCVVTLQHHDDKVQSVAWSRQSPELL 323
Query: 485 VSGSDDCKV 493
+SGS D V
Sbjct: 324 LSGSFDKSV 332
>gi|355752396|gb|EHH56516.1| Interferon-responsive finger protein 1 [Macaca fascicularis]
Length = 842
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR------- 84
A A A TS V V ++ +D+ CPIC++++ E CGHSFC CI + R
Sbjct: 21 AGARRVATMTSPVLV-DIREDVTCPICLELLTEPLSIDCGHSFCQACITPNSRESMIGQE 79
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKKT------SARQISKTASPLENFRQALQQGCG 138
+ CP C L PN L ++++ +Q+ A + + LQ C
Sbjct: 80 GERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLK--AVLCADHGEKLQLFCQ 137
Query: 139 VSVKEIDSLM----------SLLSE--------------KKRKMEQEEAERNMQILLDFL 174
K I L + L E KK K E++EAE+ + +
Sbjct: 138 EHGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKK 197
Query: 175 HCLRKQKVDELKEIQTDLHYIKEDINAVER 204
C + Q E IQT+ + ++ ++ VE+
Sbjct: 198 TCWKNQMEPERHRIQTEFNQLRNILDRVEQ 227
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSD 88
+A AS + V E ++ CPIC++++ E CGHS C CI +T KS
Sbjct: 353 SAMASKILLNVQE---EVTCPICLELLTEPLSLGCGHSLCRACITVSNKEAVTSPAGKSS 409
Query: 89 CPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
CP CG + L N L ++++ ++S
Sbjct: 410 CPVCGTSYSFENLQTNRHLTNIVERLKEVKLS 441
>gi|388498740|gb|AFK37436.1| unknown [Lotus japonicus]
Length = 446
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 50 DKDML-CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGHYLTNNQLYPNF 105
D D C IC+ + +E +T CGH FC+ C+ L SD CP C +T + P +
Sbjct: 154 DGDFFDCNICLDLAREPVVTCCGHLFCWTCVYRWLHLHSDAKECPVCKGEVTLKSVTPIY 213
Query: 106 LL---------DKLLKKTSARQISKTASPLENFRQALQQGC-GVSVKE--------IDSL 147
D LK Q + +E+ RQ +Q+ + V+E ID
Sbjct: 214 GRGNNGRSSEEDSTLKIPPGPQARR----VESLRQTIQRNAFALPVEEMIRRLGSRIDLT 269
Query: 148 MSLLSEKKRKMEQEEAERNMQILLDFL--HCLRKQKVDELKEIQTDL 192
L+ + +E+AER +L FL +R+++ + Q D+
Sbjct: 270 RDLVQPNEPDNAREQAERTTSLLSRFLTSRGMRREQNPVAPQPQDDV 316
>gi|307174595|gb|EFN65017.1| E3 ubiquitin-protein ligase RING2 [Camponotus floridanus]
Length = 379
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|93278159|gb|ABF06558.1| TNF receptor-associated factor 6 [Bos taurus]
Length = 542
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLL 111
++L
Sbjct: 125 KREIL 129
>gi|61097975|ref|NP_001012907.1| RING finger protein 4 [Gallus gallus]
gi|53127358|emb|CAG31062.1| hypothetical protein RCJMB04_1p20 [Gallus gallus]
Length = 194
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN + CP C LT+ Q +P ++
Sbjct: 136 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRGSLRNANSCPTCRKKLTHRQYHPIYI 194
>gi|380021050|ref|XP_003694387.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 2 [Apis
florea]
Length = 369
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|426367176|ref|XP_004050610.1| PREDICTED: E3 ubiquitin-protein ligase TRIM22 [Gorilla gorilla
gorilla]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-------RNKSDCPCCGHYLTNNQ 100
+++K++ CP+C++++ E CGHSFC CI + R +S CP C
Sbjct: 8 DIEKEVTCPLCLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 101 LYPNFLLDKLLKKTSARQIS 120
L PN L ++++ ++S
Sbjct: 68 LRPNRHLANIVERVKEVKMS 87
>gi|190347421|gb|EDK39684.2| hypothetical protein PGUG_03782 [Meyerozyma guilliermondii ATCC
6260]
Length = 274
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
+++ + + C +C +I+ FL +CGHSFCY C+ + NK +CP C
Sbjct: 6 IAQAQRTVECAVCSEIMHVPFLASCGHSFCYGCLCSWFTNKVNCPTC 52
>gi|89272775|emb|CAJ83567.1| Novel protein containing guanylate-binding protein, N-terminal
domain [Xenopus (Silurana) tropicalis]
Length = 611
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 31 AAAAYTAAASTS------EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR 84
A A + AAS++ E S L +D+ C IC+ + + ACGH+FC CI TH
Sbjct: 36 AGAGDSGAASSAQQPQYREDSFSSLTEDITCSICLDDLTDPVYIACGHTFCRGCITTHWG 95
Query: 85 NKSD----CPCCGHYLTNNQLYPNFLLDKLLKK 113
CP C N + P++ L L+ K
Sbjct: 96 TPHPHGYLCPECRASCPRNHIVPDYRLGNLVSK 128
>gi|242008670|ref|XP_002425125.1| Peroxisome assembly protein, putative [Pediculus humanus corporis]
gi|212508799|gb|EEB12387.1| Peroxisome assembly protein, putative [Pediculus humanus corporis]
Length = 376
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
CP+C+ I K +T CGH FC+ CII+ L++++ CP C
Sbjct: 237 CPLCLNIRKNTSVTPCGHLFCWSCIISWLQSQAKCPLC 274
>gi|440910080|gb|ELR59912.1| TNF receptor-associated factor 6 [Bos grunniens mutus]
Length = 542
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 124
Query: 107 LDKLL 111
++L
Sbjct: 125 KREIL 129
>gi|390348740|ref|XP_792718.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K + T C H FC CIIT LR+ + +CP C
Sbjct: 30 AITDETEIAVSPRSLHSELMCPICLDMLKNTYTTKECLHRFCQDCIITALRSGNKECPTC 89
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 90 RKKLVSKRSLRPDPNFDALISK 111
>gi|66523966|ref|XP_393984.2| PREDICTED: e3 ubiquitin-protein ligase RING2-A isoform 1 [Apis
mellifera]
Length = 403
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 50 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 109
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 110 RKKLVSKRSLRPDPNFDLLISK 131
>gi|383865665|ref|XP_003708293.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Megachile
rotundata]
Length = 368
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|330797592|ref|XP_003286843.1| hypothetical protein DICPUDRAFT_77720 [Dictyostelium purpureum]
gi|325083145|gb|EGC36605.1| hypothetical protein DICPUDRAFT_77720 [Dictyostelium purpureum]
Length = 454
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
G+ +D + CPIC +T C H++C +CI T L K CP C + QL N
Sbjct: 22 GIDNMDSLLRCPICYDYFNTTMMTKCSHNYCSLCIRTALSFKESCPSCRLDCNSTQLLNN 81
Query: 105 FLLDKLLK 112
LD L++
Sbjct: 82 RHLDLLVQ 89
>gi|301761420|ref|XP_002916133.1| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 3-like [Ailuropoda melanoleuca]
Length = 754
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 15 PDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSF 74
P+M ++ P A A +A S V S+L+ C +CM++ E T CGH+F
Sbjct: 426 PEMPTKASKPDPPAEQGAEAAASAPLPSFVDASDLE----CALCMRLFYEPVTTPCGHTF 481
Query: 75 CYMCIITHLRNKSDCPCC----GHYLTNNQLYPNFLLDKLLKK 113
C C+ L + + CP C L + + N ++++L+ K
Sbjct: 482 CLKCLERCLDHNAKCPLCKDGLAQCLASRKYSKNVIMEELIAK 524
>gi|194745676|ref|XP_001955313.1| GF18697 [Drosophila ananassae]
gi|190628350|gb|EDV43874.1| GF18697 [Drosophila ananassae]
Length = 432
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y +E+GVS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDGTEIGVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLLDKLLKK 113
C H FC CI+T LR+ +CP C L + + PNF D L+ K
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNF--DLLISK 107
>gi|260940072|ref|XP_002614336.1| hypothetical protein CLUG_05822 [Clavispora lusitaniae ATCC 42720]
gi|238852230|gb|EEQ41694.1| hypothetical protein CLUG_05822 [Clavispora lusitaniae ATCC 42720]
Length = 1704
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY 102
D++M+C IC I LTACGH FC C+ L S CP C Y + +Y
Sbjct: 1363 DEEMMCIICQSPIIVGSLTACGHRFCKECLNEWLARNSTCPMCKSYTDRDTVY 1415
>gi|402893800|ref|XP_003910074.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Papio
anubis]
gi|402893802|ref|XP_003910075.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Papio
anubis]
gi|288559146|sp|B6CJY4.1|TRAF6_CERTO RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|164652826|gb|ABY64982.1| TNF receptor-associated factor 6 [Cercocebus atys]
Length = 522
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|395826993|ref|XP_003786695.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Otolemur garnettii]
Length = 1803
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLY 102
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 103 PNF----LLDKLLK 112
+ L+++LLK
Sbjct: 75 ESTRFSQLVEELLK 88
>gi|146416863|ref|XP_001484401.1| hypothetical protein PGUG_03782 [Meyerozyma guilliermondii ATCC
6260]
Length = 274
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
+++ + + C +C +I+ FL +CGHSFCY C+ + NK +CP C
Sbjct: 6 IAQAQRTVECAVCSEIMHVPFLASCGHSFCYGCLCSWFTNKVNCPTC 52
>gi|157167823|ref|XP_001655936.1| ring finger protein [Aedes aegypti]
gi|108871414|gb|EAT35639.1| AAEL012209-PA [Aedes aegypti]
Length = 395
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ +CP C
Sbjct: 26 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 85
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 86 RKKLVSKRSLRPDPNFDLLISK 107
>gi|59802499|gb|AAX07493.1| WD-repeat protein [Gemmata sp. Wa1-1]
Length = 279
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 352 LTTFTRYSRLRV--------IAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVF 403
L T R S++R+ + ELRH HS + ++ D A+AG +++V+
Sbjct: 115 LATGNRNSKVRIWDWTGQVPLVELRHRGTVHS------LTYNPDGSRLASAGSDGKVRVW 168
Query: 404 DFASV-VNEPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM 462
+ +V V A V + R + +++N +++ASS ++G V +WD T +
Sbjct: 169 NVKNVGVTRDAPVELLMELSEHRRAVYSVAYNP-DGSKLASSGWDGYVRIWDAATGTQLQ 227
Query: 463 EYEEHEKRAWSVDFSRTEPSMLVSGSD 489
+ H+ AWSV FS + +GSD
Sbjct: 228 SIKGHDGDAWSVAFSNCGKWVASAGSD 254
>gi|334350182|ref|XP_001371945.2| PREDICTED: hypothetical protein LOC100018904 [Monodelphis domestica]
Length = 2255
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN----NQLYPNFLL 107
D+ CP+CM++ E T CGH+FC C+ L + CP C L + N L+
Sbjct: 1819 DLDCPLCMRLFYEPVTTPCGHTFCMKCLERSLDHNPKCPLCKEGLAECVSVRKCSKNLLM 1878
Query: 108 DKLLKK 113
+ ++ K
Sbjct: 1879 EAMIAK 1884
>gi|170047129|ref|XP_001851087.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
gi|167869650|gb|EDS33033.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
Length = 418
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ +CP C
Sbjct: 26 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 85
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 86 RKKLVSKRSLRPDPNFDLLISK 107
>gi|149409636|ref|XP_001509071.1| PREDICTED: TNF receptor-associated factor 6-like [Ornithorhynchus
anatinus]
Length = 544
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|348556143|ref|XP_003463882.1| PREDICTED: TNF receptor-associated factor 6-like [Cavia porcellus]
Length = 543
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 125
Query: 107 LDKLL 111
++L
Sbjct: 126 KREIL 130
>gi|114637057|ref|XP_001154136.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pan
troglodytes]
gi|297688920|ref|XP_002821919.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Pongo
abelii]
gi|297688922|ref|XP_002821920.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pongo
abelii]
gi|397520606|ref|XP_003830405.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Pan
paniscus]
gi|397520608|ref|XP_003830406.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pan
paniscus]
gi|410219122|gb|JAA06780.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410266204|gb|JAA21068.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410294410|gb|JAA25805.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410349181|gb|JAA41194.1| TNF receptor-associated factor 6 [Pan troglodytes]
Length = 522
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|390335932|ref|XP_788976.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 303
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K + T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDETEIAVSPRSLHSELMCPICLDMLKNTYTTKECLHRFCQDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDALISK 108
>gi|4759254|ref|NP_004611.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|22027630|ref|NP_665802.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|30580642|sp|Q9Y4K3.1|TRAF6_HUMAN RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6; AltName:
Full=Interleukin-1 signal transducer; AltName: Full=RING
finger protein 85
gi|1732426|gb|AAB38751.1| putative interleukin 1 signal transducer [Homo sapiens]
gi|28372409|gb|AAO38054.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|119588525|gb|EAW68119.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|119588526|gb|EAW68120.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|119588528|gb|EAW68122.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|158259417|dbj|BAF85667.1| unnamed protein product [Homo sapiens]
gi|168278030|dbj|BAG10993.1| TNF receptor-associated factor 6 [synthetic construct]
Length = 522
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|326920354|ref|XP_003206439.1| PREDICTED: TNF receptor-associated factor 6-like [Meleagris
gallopavo]
Length = 524
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|296476316|tpg|DAA18431.1| TPA: breast cancer type 1 susceptibility protein homolog [Bos
taurus]
Length = 1849
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|118091500|ref|XP_421089.2| PREDICTED: TNF receptor-associated factor 6 [Gallus gallus]
Length = 524
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|332210765|ref|XP_003254483.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Nomascus
leucogenys]
gi|332210767|ref|XP_003254484.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Nomascus
leucogenys]
Length = 522
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|440893907|gb|ELR46515.1| Breast cancer type 1 susceptibility protein-like protein [Bos
grunniens mutus]
Length = 1838
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|449491308|ref|XP_002195279.2| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Taeniopygia guttata]
Length = 1803
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
+S + K++ CPIC+ +++E T C H+FC C+ + K +CP C +T L
Sbjct: 15 LSAMQKNLECPICLDVVQEPVSTKCDHTFCRFCMFKLINKKKKGVVECPLCKTEVTKRSL 74
Query: 102 YPNFLLDKLLK 112
N +L++
Sbjct: 75 KENSRFKQLIE 85
>gi|336267462|ref|XP_003348497.1| hypothetical protein SMAC_02991 [Sordaria macrospora k-hell]
gi|380092152|emb|CCC10420.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 428
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 22 TDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT 81
T P A Y AA+ +G + + +C +C++ +K+ T CGH FC+ CI
Sbjct: 343 TTHTPVSKGGRAKYDLAANEEVMGWIKGRQQRMCTLCLEELKDPAATQCGHVFCWSCIGD 402
Query: 82 HLRNKSDCPCC 92
+R K +CP C
Sbjct: 403 WVREKPECPLC 413
>gi|149588816|ref|XP_001517507.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21-like [Ornithorhynchus
anatinus]
Length = 342
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 42 SEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-NKSDCPCCGHYLTNNQ 100
SE+ V + K+M CPIC++ E CGHSFC+ CI R S CP C
Sbjct: 3 SEMQVERIGKEMTCPICLEFSGEPMSIKCGHSFCHRCISKLWREGHSSCPECRASFQQED 62
Query: 101 LYPNFLLDKLLK 112
+ PN L L++
Sbjct: 63 IRPNRQLGNLVE 74
>gi|426356607|ref|XP_004045651.1| PREDICTED: tripartite motif-containing protein 73-like [Gorilla
gorilla gorilla]
Length = 250
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + EL+ + CPIC+++ KE + CGHS+C C+ + HL K CP C + +
Sbjct: 4 QVSLLELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLGSLSYHLDTKLRCPMCWQVVDGS 63
Query: 100 QLYPNFLL 107
PN L
Sbjct: 64 SSPPNVSL 71
>gi|406606632|emb|CCH42004.1| Postreplication repair E3 ubiquitin-protein ligase RAD18
[Wickerhamomyces ciferrii]
Length = 398
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLL 107
E+D + C IC + + LT CGH+FC +CI +L + CP C L + L N LL
Sbjct: 26 EIDSLLRCHICKEFLSAPMLTNCGHTFCSVCIRKYLIHTPKCPICSKELRESNLCRNVLL 85
Query: 108 DK 109
++
Sbjct: 86 EQ 87
>gi|209447040|ref|NP_001129268.1| TNF receptor-associated factor 6 [Macaca mulatta]
gi|288559147|sp|B6CJY5.1|TRAF6_MACMU RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|164652828|gb|ABY64983.1| TNF receptor-associated factor 6 [Macaca mulatta]
gi|380788709|gb|AFE66230.1| TNF receptor-associated factor 6 [Macaca mulatta]
gi|383413385|gb|AFH29906.1| TNF receptor-associated factor 6 [Macaca mulatta]
Length = 522
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|30842804|ref|NP_851594.1| E3 ubiquitin-protein ligase TRIM50 [Rattus norvegicus]
gi|56404685|sp|Q810I1.1|TRI50_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465652|gb|AAL91073.1| tripartite motif protein 50 [Rattus norvegicus]
gi|149063050|gb|EDM13373.1| tripartite motif protein 50, isoform CRA_b [Rattus norvegicus]
Length = 483
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 41/225 (18%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
++ V EL + CPIC+++ KE + CGHS+C C+ + HL ++ CP C + +
Sbjct: 4 QLTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCS 63
Query: 100 QLYPNFLLDKLLKK------TSARQISKTASPLENFRQALQQG----CGVSVKEIDSLMS 149
PN L +++ T +PL F + Q+ CG+ ++
Sbjct: 64 SSPPNVSLARVIDALRLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQHHRVT 123
Query: 150 LLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDL 209
+S +M++E A R + ELKE D ++E I + +R +
Sbjct: 124 PVSTVYSRMKEELAGR----------------LSELKEQHRD---VEEHIGKLVNNRTRI 164
Query: 210 YRARDRYSVKLR-------MLGDDSNTRKSWLSSIDKNSSGIITS 247
D +S +R L D+ R L ++ ++ G++ S
Sbjct: 165 INESDVFSWVIRREFQELHHLVDEEKARC--LEGVESHTRGLVAS 207
>gi|55249660|gb|AAH85684.1| Tripartite motif-containing 50 [Rattus norvegicus]
Length = 484
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 41/225 (18%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
++ V EL + CPIC+++ KE + CGHS+C C+ + HL ++ CP C + +
Sbjct: 4 QLTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCS 63
Query: 100 QLYPNFLLDKLLKK------TSARQISKTASPLENFRQALQQG----CGVSVKEIDSLMS 149
PN L +++ T +PL F + Q+ CG+ ++
Sbjct: 64 SSPPNVSLARVIDALRLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQHHRVT 123
Query: 150 LLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDL 209
+S +M++E A R + ELKE D ++E I + +R +
Sbjct: 124 PVSTVYSRMKEELAGR----------------LSELKEQHRD---VEEHIGKLVNNRTRI 164
Query: 210 YRARDRYSVKLR-------MLGDDSNTRKSWLSSIDKNSSGIITS 247
D +S +R L D+ R L ++ ++ G++ S
Sbjct: 165 INESDVFSWVIRREFQELHHLVDEEKARC--LEGVESHTRGLVAS 207
>gi|355566782|gb|EHH23161.1| Interferon-responsive finger protein 1 [Macaca mulatta]
Length = 842
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR------- 84
A A A TS V V ++ +D+ CPIC++++ E CGHSFC CI + R
Sbjct: 21 AGARRVATMTSPVLV-DIREDVTCPICLELLTEPLSIDCGHSFCQACITPNSRESMIGQE 79
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKK 113
+ CP C L PN L ++++
Sbjct: 80 GERSCPVCQTSYQPGNLRPNRHLANIVRR 108
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 36 TAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI-------ITHLRNKSD 88
+A AS + V E ++ CPIC++++ E CGHS C CI +T KS
Sbjct: 353 SAMASKILLNVQE---EVTCPICLELLTEPLSLGCGHSLCRACITVSNKEAVTSPGGKSS 409
Query: 89 CPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
CP CG + L N L ++++ ++S
Sbjct: 410 CPVCGTSYSFENLQTNRHLTNIVERLKEVKLS 441
>gi|156400224|ref|XP_001638900.1| predicted protein [Nematostella vectensis]
gi|156226024|gb|EDO46837.1| predicted protein [Nematostella vectensis]
Length = 133
Score = 52.0 bits (123), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK--SDCPCCGHYLTNNQLYP 103
V ++D+++LC IC+ +++ A T CGHSFC C+ T L CP C ++ + L P
Sbjct: 9 VGKIDQNLLCNICVGVLENAITTICGHSFCESCLETWLSRPEVQSCPSCRSHVLSLDLIP 68
Query: 104 ----NFLLDKLLKK-TSARQISKTASPLENFRQALQ---------QGCGVSVKEID 145
L+D LL +A + ++N + L+ + C V VK ID
Sbjct: 69 VHAIRGLVDGLLVHCENADNGCDIVTRMDNMKSHLESCPYGLVQCKACEVKVKRID 124
>gi|21410269|gb|AAH31052.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|123980612|gb|ABM82135.1| TNF receptor-associated factor 6 [synthetic construct]
gi|123995433|gb|ABM85318.1| TNF receptor-associated factor 6 [synthetic construct]
Length = 522
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|30466260|ref|NP_848668.1| breast cancer type 1 susceptibility protein homolog [Bos taurus]
gi|55976506|sp|Q864U1.1|BRCA1_BOVIN RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|29640734|gb|AAL76094.1| breast and ovarian cancer susceptibility protein [Bos taurus]
Length = 1849
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|357140487|ref|XP_003571798.1| PREDICTED: uncharacterized protein LOC100842763 [Brachypodium
distachyon]
Length = 880
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C ++IK+ LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 289 VGDLPPELHCPLCKEVIKDGVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 348
Query: 104 NFLLDKLLKKTSAR 117
N K L++T +R
Sbjct: 349 N----KTLRETISR 358
>gi|296217925|ref|XP_002755232.1| PREDICTED: TNF receptor-associated factor 6 [Callithrix jacchus]
Length = 523
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|134081964|emb|CAK97230.1| unnamed protein product [Aspergillus niger]
Length = 188
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLR----NKSD---------CPCCGHYLTNNQL 101
CP+CM +A TACGH FC+ CII L+ +SD CP C YL+ N L
Sbjct: 105 CPVCMDTPVDATSTACGHLFCHKCIIDTLKFSEEQRSDMSGKGPRGTCPVCRKYLSRNDL 164
Query: 102 Y-PNFLLDKLLKKTSARQISKTA 123
P L L K + R+ +TA
Sbjct: 165 PGPKRNLVPLQIKLTTRKRRETA 187
>gi|119623665|gb|EAX03260.1| tripartite motif-containing 31, isoform CRA_d [Homo sapiens]
Length = 196
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + N +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRKNAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|83405227|gb|AAI10974.1| Unknown (protein for IMAGE:4202738), partial [Xenopus laevis]
Length = 622
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 37 AAASTSEVG-VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS--DCPCCG 93
AA ++S VG + +++ C +C+++ K+ + CGH+FC CI + CP C
Sbjct: 139 AAPNSSLVGPAGDFAEELTCHLCVELFKDPVMVECGHNFCKACIEKAWAGQDSFSCPECK 198
Query: 94 HYLTNNQLYPNFLLDKLLKKTSARQI---SKTASPLEN 128
+ + + N L L+KKT+ + K PLEN
Sbjct: 199 EVINDKKYTINRALANLVKKTATAPVIPAEKKEKPLEN 236
>gi|355725882|gb|AES08693.1| TNF receptor-associated factor 6 [Mustela putorius furo]
Length = 540
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|357620029|gb|EHJ72363.1| putative ring finger protein 2 isoform 1 [Danaus plexippus]
Length = 377
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ +CP C L
Sbjct: 31 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 90
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 91 SKRSLRPDPNFDLLISK 107
>gi|345783121|ref|XP_003432370.1| PREDICTED: TNF receptor-associated factor 6 [Canis lupus
familiaris]
Length = 541
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|301783819|ref|XP_002927328.1| PREDICTED: tripartite motif-containing protein 60-like [Ailuropoda
melanoleuca]
Length = 499
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 17 MKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCY 76
MK + P++T ++ S++ +++L CPIC+ +KE CGH+FC
Sbjct: 28 MKANLISLGPRQTSLLLFISSGVSSTAAALADLQMGASCPICLDYLKEPVTINCGHNFCL 87
Query: 77 MCIITHLRNKS---DCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKT 122
CI +N + CP C + + N L L++ QI ++
Sbjct: 88 SCISMFWKNLNGTFPCPFCRYCSPERKFTNNPQLGNLIEIAKLLQIRRS 136
>gi|449502197|ref|XP_002198512.2| PREDICTED: TNF receptor-associated factor 6 [Taeniopygia guttata]
Length = 545
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|403254596|ref|XP_003920048.1| PREDICTED: TNF receptor-associated factor 6 [Saimiri boliviensis
boliviensis]
Length = 523
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|294659042|ref|XP_461380.2| DEHA2F23870p [Debaryomyces hansenii CBS767]
gi|202953572|emb|CAG89787.2| DEHA2F23870p [Debaryomyces hansenii CBS767]
Length = 1781
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
++E +++++C IC I LT CGH +C C+ LRN+ CP C H + + +Y NF
Sbjct: 1438 LNEEEEELMCIICRSTITIGSLTQCGHKYCKECLELWLRNQKTCPMCKHAINVSTVY-NF 1496
>gi|335297605|ref|XP_003358077.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Sus scrofa]
Length = 1865
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|146741282|dbj|BAF62296.1| breast cancer type 1 susceptibility protein homolog [Sus scrofa]
Length = 1863
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 16 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 75
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 76 RFSQLVEELLK 86
>gi|125830905|ref|XP_001343919.1| PREDICTED: RING finger protein 151-like [Danio rerio]
Length = 276
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
V D D++C IC +++ C H FC CI+ ++ + CPCC + NQ+ F
Sbjct: 44 VDPPDDDLICVICRAVLRCPVRLKCNHVFCKECILQWMKRQVKCPCCRQSIDQNQMLVLF 103
Query: 106 LLDKLLKKTSAR-----QISKTASPLEN 128
L K + + S + Q + PL N
Sbjct: 104 KLSKSIGRLSVKCRNGQQGCRATFPLSN 131
>gi|354543533|emb|CCE40252.1| hypothetical protein CPAR2_102900 [Candida parapsilosis]
Length = 422
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP-- 103
+S++ + C IC +I+ T CGHSFCY C+ +NK +CP C H + Q P
Sbjct: 22 LSKITNSLECSICSEIMLAPMTTECGHSFCYECLHQWFQNKINCPTCRHEI---QTKPAL 78
Query: 104 NFLLDKLLKKTSARQISKTASP-LENFR 130
N L+ + K + I P +++FR
Sbjct: 79 NMKLNDVSKSLAELIIDARLDPNVDSFR 106
>gi|118793629|ref|XP_320974.3| AGAP002073-PA [Anopheles gambiae str. PEST]
gi|116115902|gb|EAA01047.3| AGAP002073-PA [Anopheles gambiae str. PEST]
Length = 423
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C
Sbjct: 26 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 85
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 86 RKKLVSKRSLRPDPNFDLLISK 107
>gi|403339776|gb|EJY69150.1| LON peptidase N-terminal domain and RING finger protein 3
[Oxytricha trifallax]
Length = 305
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITH-LRNKSDCPCCGHY--LTNNQLYPNF 105
+DKD+ C IC+ + + CGH+FC +CI + L N +CP C LT + N
Sbjct: 111 MDKDIKCSICLHMYVKPISLVCGHTFCQLCIFKYFLNNTKNCPLCRRQVNLTIEEFAINI 170
Query: 106 LLDKLLKKTSARQISK 121
+LD L +K + + K
Sbjct: 171 VLDSLSRKVNPEKYMK 186
>gi|351700074|gb|EHB02993.1| TNF receptor-associated factor 6 [Heterocephalus glaber]
Length = 543
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 125
Query: 107 LDKLL 111
++L
Sbjct: 126 KREIL 130
>gi|395543668|ref|XP_003773736.1| PREDICTED: TNF receptor-associated factor 6 [Sarcophilus harrisii]
Length = 530
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFLLDKLLK 112
CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF ++L
Sbjct: 70 CPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNEILLENQLFPDNFAKREILS 129
Query: 113 KT 114
T
Sbjct: 130 LT 131
>gi|395520814|ref|XP_003764518.1| PREDICTED: ligand of Numb protein X 2 [Sarcophilus harrisii]
Length = 685
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 40 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 83
>gi|328876839|gb|EGG25202.1| RING zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 786
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
V + + D+D LCPIC + A +T CGH CY CI+ L + CP C
Sbjct: 268 VYLHDSDEDYLCPICFEPPFAAKVTKCGHITCYGCILRSLSHSPKCPLC 316
>gi|119628818|gb|EAX08413.1| ligand of numb-protein X 2, isoform CRA_a [Homo sapiens]
Length = 1253
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|45383782|ref|NP_989500.1| breast cancer 1, early onset [Gallus gallus]
gi|15081211|gb|AAK83825.1|AF355273_1 breast and ovarian cancer susceptibility-like protein [Gallus
gallus]
Length = 1749
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
+S + K++ CP+C+ +IKE T C H FC C+ L K CP C +T L
Sbjct: 15 LSAMQKNLECPVCLDVIKEPVSTKCDHVFCRFCMFKLLSRKKKGVIQCPLCKTEVTKRSL 74
Query: 102 YPNF----LLDKLLKKTSARQI 119
N L++ LL+ SA ++
Sbjct: 75 KENSRFKQLIEGLLEAISAFEL 96
>gi|193700165|ref|XP_001946738.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 338
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCC 92
A ++E+ VS L +++CPIC+ ++K+ T C H FC CI+T LR+ +CP C
Sbjct: 27 AITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDLLISK 108
>gi|85111992|ref|XP_964203.1| hypothetical protein NCU03277 [Neurospora crassa OR74A]
gi|28925975|gb|EAA34967.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 429
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 22 TDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT 81
T P A Y AA+ +G + + +C +C++ +K+ T CGH FC+ CI
Sbjct: 344 TTHTPVPKGGRANYDLAANEEVMGWIKGRQQRMCTLCLEELKDPAATQCGHVFCWSCIGD 403
Query: 82 HLRNKSDCPCC 92
+R K +CP C
Sbjct: 404 WVREKPECPLC 414
>gi|414871338|tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
Length = 810
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
V +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 285 VGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 344
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V V++++S + +
Sbjct: 345 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESALPV 382
>gi|350296380|gb|EGZ77357.1| hypothetical protein NEUTE2DRAFT_100161 [Neurospora tetrasperma
FGSC 2509]
Length = 432
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 22 TDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT 81
T P A Y AA+ +G + + +C +C++ +K+ T CGH FC+ CI
Sbjct: 347 TTHTPVPKGGRANYDLAANEEVMGWIKGRQQRMCTLCLEELKDPAATQCGHVFCWSCIGD 406
Query: 82 HLRNKSDCPCC 92
+R K +CP C
Sbjct: 407 WVREKPECPLC 417
>gi|126327411|ref|XP_001367057.1| PREDICTED: ligand of Numb protein X 2 [Monodelphis domestica]
Length = 685
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 40 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 83
>gi|12275862|gb|AAG50166.1|AF230387_1 tripartite motif protein TRIM31 beta [Homo sapiens]
Length = 267
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + + +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCPQC-ITQIGETSCGFFKCPLCKTSVRRDAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|413935244|gb|AFW69795.1| hypothetical protein ZEAMMB73_177863 [Zea mays]
Length = 416
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 361 LRVIAELRHGDIFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVV----------N 410
R+ A + + +++ + S++ D +L AT G++R+I+++D S++
Sbjct: 27 FRLAATVPTTALPGASDAIGSVDLDPTGRLLATGGIARKIRMYDVPSMLLPPPDSAGPAP 86
Query: 411 EPADVHCPVVEMPTRSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEH-EK 469
PA C V +KLS + W + DY+G+VT +D + E +EH +
Sbjct: 87 APAPAACICVP----AKLSSVRWRPDGGAAVGCGDYDGVVTEYDAERGVASWERDEHGGR 142
Query: 470 RAWSVDF--SRTEPSMLVSGSDD 490
R WS+D+ +M SGSDD
Sbjct: 143 RVWSLDYAPPGAPAAMAASGSDD 165
>gi|50546765|ref|XP_500852.1| YALI0B13750p [Yarrowia lipolytica]
gi|49646718|emb|CAG83103.1| YALI0B13750p [Yarrowia lipolytica CLIB122]
Length = 409
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 372 IFHSANIVSSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSCL 431
I H ++ + LFA+ G +++ V D + V E TR+ +
Sbjct: 238 IHHQGSVNDVTWHPSEKTLFASVGDDQKLYVIDTTD--------NSTVYETDTRTASLSV 289
Query: 432 SWNKFSKNRIASSDYEGIVTVWDV--TTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSD 489
+++ F+ +A+S +GIV +WD+ T+Q + HE S+D+S P +LVSGS+
Sbjct: 290 AFSPFNNRVVATSGEDGIVNLWDIKSTSQTPIGRLVGHEGPVGSLDWSPHNPRLLVSGSE 349
Query: 490 DCKVL 494
D + +
Sbjct: 350 DKRAI 354
>gi|342180321|emb|CCC89798.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 374 HSANIVSSIEFDR-DDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSKLSC-- 430
HS I+ SI++++ D+ +FAT GV R ++++D + +P P+ +P + +C
Sbjct: 196 HSHQIILSIDWNKHDNSIFATGGVDRMVQLWD----LRKPQQ---PIASLPGHAN-ACRR 247
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTTQQSVM--EYEEHEKRAWSVDFSRTEPSMLVSGS 488
+ ++ S+ +ASS Y+ V VWD++ Q + Y H + +++S P+ L S S
Sbjct: 248 VRFSPHSRTVLASSGYDCRVCVWDLSQPQRPLTARYAHHREFVAGLEWSLDVPNSLASAS 307
Query: 489 DDCKVLY 495
D V +
Sbjct: 308 WDGSVFF 314
>gi|291410362|ref|XP_002721465.1| PREDICTED: ligand of numb-protein X 2 [Oryctolagus cuniculus]
Length = 689
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|281604214|ref|NP_001163932.1| tripartite motif-containing 6 [Rattus norvegicus]
Length = 488
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 41 TSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCCG 93
TS V V ++ ++ CPIC++++ E CGHSFC CII + N KS CP C
Sbjct: 2 TSAVLV-DIRDEVTCPICLELLTEPLSIDCGHSFCQACIIGNSDNSVLNPEGKSSCPVCR 60
Query: 94 HYLTNNQLYPNFLLDKLLKKT------SARQISKTASPLENFRQALQQGCGVSVKEIDSL 147
L PN L ++K+ +Q+ L + LQ C KE L
Sbjct: 61 TVYQPGSLRPNRHLAAIVKRLREVVLGPGKQLEVIFCALHG--EKLQLFC----KEDGKL 114
Query: 148 MSLLSEKKRK-------MEQEEAERNMQILLDFLHCLRK--QKVDELKE-IQTDLHYIKE 197
+ L E+ + + +E A+ + + L LR+ Q+ ++LK IQ K
Sbjct: 115 ICWLCERSLEHRGHHTFLMEEVAQEYQDMFQESLKKLRREQQEAEKLKALIQEKRESWKS 174
Query: 198 DINAVERHRI 207
+ ERHRI
Sbjct: 175 QVEP-ERHRI 183
>gi|291411490|ref|XP_002722012.1| PREDICTED: tripartite motif protein 50A [Oryctolagus cuniculus]
Length = 487
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
+V + +L+ + CPIC+++ +E + CGHS+C C++ HL ++ CP C +
Sbjct: 4 QVSMPQLEDRLQCPICLEVFREPLMLQCGHSYCKDCLLALSRHLDSELRCPVCRQPADCS 63
Query: 100 QLYPNFLLDKLLKKTSARQISKTASP 125
PN L ++++ A Q+ + P
Sbjct: 64 SSPPNVSLARVIE---ALQLPEEPEP 86
>gi|431915712|gb|ELK16045.1| TNF receptor-associated factor 6 [Pteropus alecto]
Length = 571
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CII +R+ CP L QL+P NF
Sbjct: 148 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLETQLFPDNFA 207
Query: 107 LDKLLKKT 114
++L T
Sbjct: 208 KREILSLT 215
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR 84
L+ CPIC+ ++EA T CGH FC CII +R
Sbjct: 42 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 77
>gi|344305785|ref|XP_003421570.1| PREDICTED: tripartite motif-containing protein 5-like, partial
[Loxodonta africana]
Length = 251
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-------NKSDCPCCGHYLTN 98
V +L +++ CPIC+++++E CGHSFC CI + + +S CP C
Sbjct: 6 VVKLQEEVTCPICLELLREPLSLDCGHSFCQACITVNSKTSMVSSEGESTCPMCRIKYQA 65
Query: 99 NQLYPNFLLDKLLKKTSARQIS 120
+ L PN L +++K ++S
Sbjct: 66 DNLRPNQHLANIVEKLREVKVS 87
>gi|194207726|ref|XP_001503790.2| PREDICTED: tripartite motif-containing protein 62-like [Equus
caballus]
Length = 424
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL-----RNKSDCPCCGHYLTNNQLYP 103
L ++LC IC+ I ++ C H FC CI H + DCP C L P
Sbjct: 5 LKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEPALAP 64
Query: 104 NFLLDKLLKKTSARQISKTAS-PLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEE 162
+ L ++++ SA + + L+ QALQ S +E + LL K++ E +
Sbjct: 65 SLKLANIVERYSAFPLDAILNRELKEQLQALQD----SEREHTEALQLL--KRQLAETKS 118
Query: 163 AERNMQILL----DFLH-CLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYS 217
+ ++++ + + LH LR+++ L+E++ D R D+ + RYS
Sbjct: 119 STKSLRTTIGEAFERLHRLLRERQKAMLEELEAD----------TARTLTDIEQKVQRYS 168
Query: 218 VKLRMLGDDSNTRKSWLSSIDKNSSGIITSSLNAR 252
+LR + + + + L+ D+++ +SL+ R
Sbjct: 169 QQLRKVQEGAQILQERLAETDRHTFLAGVASLSER 203
>gi|149054320|gb|EDM06137.1| rCG34321, isoform CRA_a [Rattus norvegicus]
Length = 1817
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGSA 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|336464297|gb|EGO52537.1| hypothetical protein NEUTE1DRAFT_72255 [Neurospora tetrasperma FGSC
2508]
Length = 433
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 22 TDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT 81
T P A Y AA+ +G + + +C +C++ +K+ T CGH FC+ CI
Sbjct: 348 TTHTPVPKGGRANYDLAANEEVMGWIKGRQQRMCTLCLEELKDPAATQCGHVFCWSCIGD 407
Query: 82 HLRNKSDCPCC 92
+R K +CP C
Sbjct: 408 WVREKPECPLC 418
>gi|255953483|ref|XP_002567494.1| peroxisomal integral membrane protein Pex10-Penicillium chrysogenum
[Penicillium chrysogenum Wisconsin 54-1255]
gi|111609725|gb|ABH11418.1| peroxin 10 [Penicillium chrysogenum]
gi|211589205|emb|CAP95345.1| peroxisomal integral membrane protein Pex10-Penicillium chrysogenum
[Penicillium chrysogenum Wisconsin 54-1255]
Length = 376
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
C +C+++ K+ +T CGH FC++C+ +R K +CP C L +++ P
Sbjct: 325 CTLCLEMFKDPSVTTCGHVFCWICVRDWVREKPECPLCRQELLLSKVLP 373
>gi|55639667|ref|XP_522642.1| PREDICTED: ligand of Numb protein X 2 [Pan troglodytes]
gi|397495063|ref|XP_003818381.1| PREDICTED: ligand of Numb protein X 2 [Pan paniscus]
gi|410220896|gb|JAA07667.1| ligand of numb-protein X 2 [Pan troglodytes]
gi|410249430|gb|JAA12682.1| ligand of numb-protein X 2 [Pan troglodytes]
gi|410306068|gb|JAA31634.1| ligand of numb-protein X 2 [Pan troglodytes]
gi|410329377|gb|JAA33635.1| ligand of numb-protein X 2 [Pan troglodytes]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|119628819|gb|EAX08414.1| ligand of numb-protein X 2, isoform CRA_b [Homo sapiens]
gi|306921481|dbj|BAJ17820.1| ligand of numb-protein X 2 [synthetic construct]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|426375011|ref|XP_004054345.1| PREDICTED: ligand of Numb protein X 2 [Gorilla gorilla gorilla]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|24025688|ref|NP_699202.1| ligand of Numb protein X 2 [Homo sapiens]
gi|29840784|sp|Q8N448.1|LNX2_HUMAN RecName: Full=Ligand of Numb protein X 2; AltName:
Full=Numb-binding protein 2; AltName: Full=PDZ
domain-containing RING finger protein 1
gi|22477650|gb|AAH36755.1| Ligand of numb-protein X 2 [Homo sapiens]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|403293325|ref|XP_003937668.1| PREDICTED: tripartite motif-containing protein 62 [Saimiri
boliviensis boliviensis]
Length = 721
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 5 STEPVVPAVKPDMKPSST-DTAPQETDAAAAYTAAASTSEVGVS-ELDKDMLCPICMQII 62
S+ P + +P +PS TAP+ AA A S + ++ L ++LC IC+ I
Sbjct: 205 SSYPCLCGPRPSSQPSVLHPTAPRSLSRPAAPRAPLSAAPGAMACSLKDELLCSICLSIY 264
Query: 63 KEAFLTACGHSFCYMCIITHL-----RNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSA 116
++ C H FC CI H + DCP C L P+ L ++++ SA
Sbjct: 265 QDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEPALAPSLKLANIVERYSA 323
>gi|149054321|gb|EDM06138.1| rCG34321, isoform CRA_b [Rattus norvegicus]
Length = 1550
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGSA 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|350587514|ref|XP_003482431.1| PREDICTED: E3 ubiquitin-protein ligase LNX-like [Sus scrofa]
Length = 1114
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 11 PAVKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTAC 70
PA +PD+ P AP A++ + E+D D++C IC+Q + + T C
Sbjct: 6 PADEPDLSP-----APLCVVCGQAHSPEENHFYTYPEEVDDDLICHICLQALLDPLDTPC 60
Query: 71 GHSFCYMCIITHLRNKSDCP 90
GH++C +C+ L K CP
Sbjct: 61 GHTYCTVCLTNFLVEKDFCP 80
>gi|307210091|gb|EFN86788.1| Breast cancer type 1 susceptibility protein-like protein
[Harpegnathos saltator]
Length = 1955
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
V+ + K + C IC+Q++ T C HSFC CI LR + CP C L ++ +
Sbjct: 18 AVNSIQKCLECAICLQLMTAPVRTRCDHSFCQKCIGRVLRKNAPCPLCKEVLNRRSIFKD 77
Query: 105 FLLDKLLKK 113
L+ + K
Sbjct: 78 DHLESCIHK 86
>gi|242007226|ref|XP_002424443.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507843|gb|EEB11705.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 411
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNN-QLYPN-F 105
LD+ CPIC+ +KE LT+CGH FC C+ L +K + CP G L L+P+ F
Sbjct: 13 LDRQFECPICLSCLKEPVLTSCGHRFCSSCLNLWLESKGESCPVDGGILNKKLDLFPDHF 72
Query: 106 LLDKLLKKTSARQISK 121
++L +T+ ++ K
Sbjct: 73 TRREILNRTTICKLCK 88
>gi|395532332|ref|XP_003768224.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Sarcophilus harrisii]
Length = 1757
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTTCDHIFCKFCMLKLLGKKKGPSQCPLCKNNVTKRSLREST 77
Query: 106 ----LLDKLLKKTSARQI 119
L++ LLK A ++
Sbjct: 78 RFKQLVEGLLKTIRAFEL 95
>gi|332242170|ref|XP_003270257.1| PREDICTED: ligand of Numb protein X 2 [Nomascus leucogenys]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|297693740|ref|XP_002824164.1| PREDICTED: ligand of Numb protein X 2 [Pongo abelii]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|231291746|dbj|BAH58735.1| tripartite motif-containing 31 gamma [Homo sapiens]
Length = 262
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + + +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKC-ITQIGETSCGFFKCPLCKTSVRRDAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|417411332|gb|JAA52106.1| Putative e3 ubiquitin-protein ligase trim22, partial [Desmodus
rotundus]
Length = 515
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN 85
PQE AA A + + + + CPIC++++ E CGHSFC CI + +
Sbjct: 19 PQEETRGAATMALKF-----LVNIKEKVTCPICLEVLTEPLSLNCGHSFCKTCITNNKES 73
Query: 86 ------KSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
+S CP CG + L+ N L +++K +IS
Sbjct: 74 GIGPGGESSCPVCGIRYSPGNLWLNQHLANIVEKLKEVKIS 114
>gi|403343086|gb|EJY70868.1| hypothetical protein OXYTRI_08266 [Oxytricha trifallax]
Length = 736
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 31 AAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
AA S G+S L K +LCP+C+ I + T CGHS+C C+ +L ++ C
Sbjct: 99 AAIGNQQIGSLQTEGLSGLQK-LLCPLCLNCIYKCTTTVCGHSYCEKCLEEYLIIRNYCY 157
Query: 91 CCGHYLTNNQLYPNF----LLDKLLKKTSARQI 119
C + N L F ++D+L+ K+ + I
Sbjct: 158 ICEEIIRNKPLMSCFSVDNIIDQLIHKSEDQDI 190
>gi|296203608|ref|XP_002748957.1| PREDICTED: ligand of Numb protein X 2 [Callithrix jacchus]
Length = 689
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|296201526|ref|XP_002748065.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Callithrix jacchus]
Length = 1857
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|222612863|gb|EEE50995.1| hypothetical protein OsJ_31610 [Oryza sativa Japonica Group]
Length = 892
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+ +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 262 LGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 321
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V V++++S + +
Sbjct: 322 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESAIPV 359
>gi|328707142|ref|XP_001949156.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 25 APQETDAAAAYTAAASTSEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIIT 81
+PQE A +E+ VS L +++CPIC+ ++K+ T C H FC CI+T
Sbjct: 23 SPQE--------AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVT 74
Query: 82 HLRN-KSDCPCCGHYLTNNQ-LYPNFLLDKLLKK 113
LR+ +CP C L + + L P+ D L+ K
Sbjct: 75 ALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISK 108
>gi|218184575|gb|EEC67002.1| hypothetical protein OsI_33708 [Oryza sativa Indica Group]
Length = 894
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+ +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 264 LGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 323
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V V++++S + +
Sbjct: 324 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESAIPV 361
>gi|403254002|ref|XP_003919772.1| PREDICTED: ligand of Numb protein X 2 [Saimiri boliviensis
boliviensis]
Length = 689
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|395850169|ref|XP_003797670.1| PREDICTED: ligand of Numb protein X 2 [Otolemur garnettii]
Length = 688
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|296201528|ref|XP_002748066.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Callithrix jacchus]
Length = 1880
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|170033120|ref|XP_001844427.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873541|gb|EDS36924.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 298
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 51 KDMLCPICMQII--KEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
+ ++CPIC I K+A T CGH FC+ CI ++ + CP C L +Q++P +
Sbjct: 240 RSVVCPICYDSIFKKQASSTVCGHLFCFACIKQEIQLRQKCPLCKRKLGRSQIHPIYF 297
>gi|6978573|ref|NP_036646.1| breast cancer type 1 susceptibility protein homolog [Rattus
norvegicus]
gi|41688427|sp|O54952.1|BRCA1_RAT RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|2695691|gb|AAC36493.1| BRCA1 [Rattus norvegicus]
Length = 1817
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGSA 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|444518030|gb|ELV11917.1| Ligand of Numb protein X 2 [Tupaia chinensis]
Length = 636
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|145510326|ref|XP_001441096.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408335|emb|CAK73699.1| unnamed protein product [Paramecium tetraurelia]
Length = 402
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN--NQLYPNFLLDKLLK 112
CP C + +E CGH+FC CII + K CP C + +TN N + NFL+ ++K
Sbjct: 50 CPSCQLLFEEPITIVCGHTFCRECIIRSVNLKPQCPECLYPITNIINNIQENFLVKSVVK 109
Query: 113 KTSARQISK 121
+ + I++
Sbjct: 110 EINELFIAQ 118
>gi|78708684|gb|ABB47659.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 916
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+ +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 286 LGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 345
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V V++++S + +
Sbjct: 346 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESAIPV 383
>gi|51950093|gb|AAH82342.1| TNF receptor-associated factor 6 [Xenopus (Silurana) tropicalis]
Length = 558
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQLFPDNFA 125
Query: 107 LDKLL 111
++L
Sbjct: 126 KREIL 130
>gi|395815540|ref|XP_003781284.1| PREDICTED: TNF receptor-associated factor 6 [Otolemur garnettii]
Length = 535
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++E T CGH FC CII +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREPVQTPCGHRFCKACIIKSIRDAGHKCPIDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|141795861|gb|AAI34814.1| Unknown (protein for IMAGE:8527468) [Xenopus laevis]
Length = 586
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 37 AAASTSEVG-VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL--RNKSDCPCCG 93
AA ++S VG + +++ C +C+++ K+ + CGH+FC CI ++ CP C
Sbjct: 103 AAPNSSLVGPAGDFAEELTCHLCVELFKDPVMVECGHNFCKACIEKAWAGQDSFSCPECK 162
Query: 94 HYLTNNQLYPNFLLDKLLKKTSARQI---SKTASPLEN 128
+ + + N L L+KKT+ + K PLEN
Sbjct: 163 EVINDKKYTINRALANLVKKTATAPVIPAEKKEKPLEN 200
>gi|29647951|gb|AAO92398.1|AF479648_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11 [Bos taurus]
Length = 715
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLKKTSARQI 119
L+++LLK A ++
Sbjct: 78 RFSQLVEELLKIIHAFEL 95
>gi|355754591|gb|EHH58492.1| Numb-binding protein 2 [Macaca fascicularis]
Length = 690
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|290998744|ref|XP_002681940.1| RING finger domain-containing protein [Naegleria gruberi]
gi|284095566|gb|EFC49196.1| RING finger domain-containing protein [Naegleria gruberi]
Length = 693
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL----RNKSDCPCCG 93
D++ CPIC+ K +T CGH FCY CI+ H+ N CP C
Sbjct: 250 DENQECPICLDTFKAPKMTKCGHVFCYPCILRHVALGETNYRKCPLCN 297
>gi|384475597|ref|NP_001244976.1| ligand of Numb protein X 2 [Macaca mulatta]
gi|355700889|gb|EHH28910.1| Numb-binding protein 2 [Macaca mulatta]
gi|383409801|gb|AFH28114.1| ligand of Numb protein X 2 [Macaca mulatta]
Length = 690
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|426238121|ref|XP_004013006.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Ovis aries]
Length = 1862
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|330803062|ref|XP_003289529.1| hypothetical protein DICPUDRAFT_80290 [Dictyostelium purpureum]
gi|325080389|gb|EGC33947.1| hypothetical protein DICPUDRAFT_80290 [Dictyostelium purpureum]
Length = 673
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 52 DMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
++ CPIC + + +T+ CGH+FC CII K CP C L N L+P FL
Sbjct: 366 NLECPICFEEMGANGMTSTICGHAFCTKCIIKSFERKKSCPMCNKKLRKNSLHPLFL 422
>gi|19112215|ref|NP_595423.1| postreplication repair E3 ubiquitin-protein ligase
[Schizosaccharomyces pombe 972h-]
gi|21362848|sp|O74747.1|RAD18_SCHPO RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
rad18; AltName: Full=RAD18 homolog
gi|3738164|emb|CAA21300.1| Rad18 homolog Rhp18 [Schizosaccharomyces pombe]
gi|18640085|dbj|BAB84669.1| ScRad18 homolog [Schizosaccharomyces pombe]
Length = 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108
LD + C IC + + +T+C H+FC CI +LR CP C ++L N +L+
Sbjct: 23 LDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACRAPEQESRLRKNTILE 82
Query: 109 KLLK 112
++L+
Sbjct: 83 EILE 86
>gi|319803023|ref|NP_001188361.1| E3 ubiquitin-protein ligase RING1 [Bombyx mori]
gi|317175909|dbj|BAJ54070.1| sex combs extra [Bombyx mori]
Length = 377
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C L
Sbjct: 31 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 90
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 91 SKRSLRPDPNFDLLISK 107
>gi|402901665|ref|XP_003913765.1| PREDICTED: ligand of Numb protein X 2-like, partial [Papio
anubis]
Length = 522
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 42 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|344284493|ref|XP_003414001.1| PREDICTED: ligand of Numb protein X 2 [Loxodonta africana]
Length = 688
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 41 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 84
>gi|256080096|ref|XP_002576319.1| polycomb-m33 interacting protein ring1b [Schistosoma mansoni]
gi|350646016|emb|CCD59293.1| polycomb-m33 interacting protein ring1b,putative [Schistosoma
mansoni]
Length = 460
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQL 101
V L +++CPIC+ I+K T C H FC CIIT LRN + +CP C L + +
Sbjct: 33 VSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRNGNKECPTCRKKLVSKRS 92
Query: 102 Y---PNFLLDKLLKK 113
PNF D L+ K
Sbjct: 93 LRRDPNF--DALISK 105
>gi|224043240|ref|XP_002192829.1| PREDICTED: ligand of Numb protein X 2 [Taeniopygia guttata]
Length = 687
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 40 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 83
>gi|395543140|ref|XP_003773479.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Sarcophilus harrisii]
Length = 191
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN S CP C L Q +P ++
Sbjct: 133 CPICMDGYSEILQSGRLIVSTKCGHVFCSQCLRDALRNASSCPTCRKKLNQKQYHPIYI 191
>gi|326914278|ref|XP_003203453.1| PREDICTED: ligand of Numb protein X 2-like [Meleagris gallopavo]
Length = 689
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 40 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 83
>gi|118347248|ref|XP_001007101.1| hypothetical protein TTHERM_00204150 [Tetrahymena thermophila]
gi|89288868|gb|EAR86856.1| hypothetical protein TTHERM_00204150 [Tetrahymena thermophila
SB210]
Length = 242
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
+ L+KD +C IC+Q I + T CGH+FC C+ + C C + N ++ F
Sbjct: 46 IRHLEKDFICAICLQYICCSTSTKCGHAFCETCLTEYELLFDKCLVCDSSIKNQEIRSCF 105
Query: 106 LLDKLLKKTSARQISKTASPLENF 129
LLD L+++ R S L+NF
Sbjct: 106 LLDNLIQEFIER---NHPSELQNF 126
>gi|29647953|gb|AAO92399.1|AF479649_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11b [Bos taurus]
Length = 752
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLKKTSARQI 119
L+++LLK A ++
Sbjct: 78 RFSQLVEELLKIIHAFEL 95
>gi|21357313|ref|NP_649596.1| degringolade, isoform A [Drosophila melanogaster]
gi|7296664|gb|AAF51944.1| degringolade, isoform A [Drosophila melanogaster]
gi|16768306|gb|AAL28372.1| GM01182p [Drosophila melanogaster]
gi|220950342|gb|ACL87714.1| CG10981-PA [synthetic construct]
Length = 319
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 55 CPICMQII--KEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM + +E T CGH FC CI T +R CP C LT Q + +L
Sbjct: 266 CPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNKKLTARQFFRIYL 319
>gi|89886034|ref|NP_001008162.2| TNF receptor-associated factor 6 [Xenopus (Silurana) tropicalis]
gi|123907325|sp|Q28DL4.1|TRAF6_XENTR RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|89273399|emb|CAJ82470.1| TNF receptor-associated factor 6 [Xenopus (Silurana) tropicalis]
Length = 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQLFPDNFA 125
Query: 107 LDKLL 111
++L
Sbjct: 126 KREIL 130
>gi|403361204|gb|EJY80299.1| hypothetical protein OXYTRI_22311 [Oxytricha trifallax]
Length = 363
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGH--YLTNNQLYPNF 105
E++ ++ C IC+ ++ + T CGH+FC C+ L+ K+ C C L+++ L N
Sbjct: 8 EIEDELTCTICLDLLYQPVSTQCGHTFCKTCLSNSLKYKNQCTICREPILLSSDLLPVNI 67
Query: 106 LLDKLLKKTSARQISK 121
+L KL++K + + K
Sbjct: 68 VLQKLIEKKYPKIVKK 83
>gi|449270116|gb|EMC80834.1| TNF receptor-associated factor 6 [Columba livia]
Length = 545
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPIDNEILLENQLFPDNFA 123
Query: 107 LDKLL 111
++L
Sbjct: 124 KREIL 128
>gi|308502261|ref|XP_003113315.1| hypothetical protein CRE_25605 [Caenorhabditis remanei]
gi|308265616|gb|EFP09569.1| hypothetical protein CRE_25605 [Caenorhabditis remanei]
Length = 159
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC----GHYLTNNQL 101
D+D C +C+ E + CGHSFC++CI +HL CP C G+ + N QL
Sbjct: 3 DEDFCCAVCLDFFIEPCIIKCGHSFCHLCIESHLNITEKCPLCRAFPGNPIKNRQL 58
>gi|115441933|ref|NP_001045246.1| Os01g0924300 [Oryza sativa Japonica Group]
gi|57899385|dbj|BAD88032.1| beta transducin-like protein HET-E2C-like [Oryza sativa Japonica
Group]
gi|57900202|dbj|BAD88309.1| beta transducin-like protein HET-E2C-like [Oryza sativa Japonica
Group]
gi|113534777|dbj|BAF07160.1| Os01g0924300 [Oryza sativa Japonica Group]
gi|215704754|dbj|BAG94782.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189636|gb|EEC72063.1| hypothetical protein OsI_04990 [Oryza sativa Indica Group]
gi|222619787|gb|EEE55919.1| hypothetical protein OsJ_04598 [Oryza sativa Japonica Group]
Length = 487
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 425 RSKLSCLSWNKFSKNRIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSML 484
RS + L+WNK +N +AS+ + V +WDV+ + + E H+ + SV +SR P +L
Sbjct: 264 RSSVLGLAWNKEVRNVLASASADKTVKIWDVSVGKCAVTLEHHDDKVQSVAWSRQSPEVL 323
Query: 485 VSGSDDCKV 493
+SGS D V
Sbjct: 324 LSGSFDKSV 332
>gi|410924147|ref|XP_003975543.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Takifugu
rubripes]
Length = 342
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 37 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 96
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 97 KRSLRPDPNFDALISK 112
>gi|229366298|gb|ACQ58129.1| E3 ubiquitin-protein ligase RING2 [Anoplopoma fimbria]
Length = 344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 39 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 98
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 99 KRSLRPDPNFDALISK 114
>gi|194898903|ref|XP_001979002.1| GG13065 [Drosophila erecta]
gi|190650705|gb|EDV47960.1| GG13065 [Drosophila erecta]
Length = 320
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 21 STDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQII--KEAFLTACGHSFCYMC 78
ST+ +P D A + EV +S+ + CP+CM + +E T CGH FC C
Sbjct: 234 STENSPV-VDLDAVSPPKRVSREVNLSQKEDSYKCPVCMDSVTKREPVSTKCGHVFCREC 292
Query: 79 IITHLRNKSDCPCCGHYLTNNQLYPNFL 106
I T + CP C LT Q + +L
Sbjct: 293 IQTAISATHKCPMCNKKLTARQFFRIYL 320
>gi|338711847|ref|XP_001492115.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Equus caballus]
Length = 1856
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 LLDKLLKK 113
+L+++
Sbjct: 78 RFSQLVEE 85
>gi|348543967|ref|XP_003459453.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oreochromis
niloticus]
Length = 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 37 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 96
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 97 KRSLRPDPNFDALISK 112
>gi|344296988|ref|XP_003420182.1| PREDICTED: tripartite motif-containing protein 69 [Loxodonta
africana]
Length = 543
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 13 VKPDMKPSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGH 72
++P PS++ T + T S+V + ++ K++ CP+C ++ + +CGH
Sbjct: 42 LRPSAVPSTSSTMDSGSYVEMNDTVTQIHSKVQIQDITKELHCPLCHDWFRDPLMLSCGH 101
Query: 73 SFCYMCIITHLRNKSD---CPCCGHYLTNNQLYPNFLLDKLLKK 113
+FC +CI + ++ CP C + N +++KL++K
Sbjct: 102 NFCQICIQNFWKQQAKETFCPECKMLCQYSNCTFNIVVEKLVEK 145
>gi|156408748|ref|XP_001642018.1| predicted protein [Nematostella vectensis]
gi|156229159|gb|EDO49955.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLT 97
+E+ +S L +++CPIC+ ++K T C H FC CIIT LR+ +CP C L
Sbjct: 35 TEISISPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNKECPTCRKKLV 94
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 95 SKRSLRPDPNFDALIAK 111
>gi|118084972|ref|XP_417122.2| PREDICTED: ligand of Numb protein X 2 [Gallus gallus]
Length = 692
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47 SELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
+E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 40 NEVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 83
>gi|34996481|ref|NP_571288.1| E3 ubiquitin-protein ligase RING2 [Danio rerio]
gi|62901019|sp|Q803I4.1|RING2_DANRE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|27881923|gb|AAH44472.1| Ring finger protein 2 [Danio rerio]
gi|182890358|gb|AAI64137.1| Rnf2 protein [Danio rerio]
Length = 336
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 37 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 96
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 97 KRSLRPDPNFDALISK 112
>gi|24644441|ref|NP_731017.1| degringolade, isoform B [Drosophila melanogaster]
gi|23175939|gb|AAN14328.1| degringolade, isoform B [Drosophila melanogaster]
gi|25012446|gb|AAN71329.1| RE22765p [Drosophila melanogaster]
Length = 312
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 55 CPICMQII--KEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM + +E T CGH FC CI T +R CP C LT Q + +L
Sbjct: 259 CPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNKKLTARQFFRIYL 312
>gi|268573634|ref|XP_002641794.1| Hypothetical protein CBG10147 [Caenorhabditis briggsae]
Length = 158
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY 95
D+D C +C+ E + CGHSFC++CI +HL CP C Y
Sbjct: 3 DEDFCCAVCLDFFVEPCIIKCGHSFCHLCIESHLNVNEKCPLCRSY 48
>gi|321459285|gb|EFX70340.1| hypothetical protein DAPPUDRAFT_202413 [Daphnia pulex]
Length = 347
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCC 92
A +E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C
Sbjct: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIITALRSGNKECPTC 86
Query: 93 GHYLTNNQ-LYPNFLLDKLLKK 113
L + + L P+ D L+ K
Sbjct: 87 RKKLVSKRSLRPDPNFDMLIAK 108
>gi|50416449|gb|AAH78005.1| Rnf36 protein, partial [Xenopus laevis]
Length = 536
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 37 AAASTSEVG-VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL--RNKSDCPCCG 93
AA ++S VG + +++ C +C+++ K+ + CGH+FC CI ++ CP C
Sbjct: 53 AAPNSSLVGPAGDFAEELTCHLCVELFKDPVMVECGHNFCKACIEKAWAGQDSFSCPECK 112
Query: 94 HYLTNNQLYPNFLLDKLLKKTSARQI---SKTASPLEN 128
+ + + N L L+KKT+ + K PLEN
Sbjct: 113 EVINDKKYTINRALANLVKKTATAPVIPAEKKEKPLEN 150
>gi|432911762|ref|XP_004078710.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oryzias latipes]
Length = 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 37 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 96
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 97 KRSLRPDPNFDALISK 112
>gi|74207028|dbj|BAE33300.1| unnamed protein product [Mus musculus]
Length = 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|308080596|ref|NP_001183915.1| uncharacterized protein LOC100502508 [Zea mays]
gi|238015412|gb|ACR38741.1| unknown [Zea mays]
Length = 263
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 46 VSELDKD--MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQ 100
V E+ K+ + CPICM I EA T CGH FC CI ++ + CP C LT Q
Sbjct: 198 VKEVPKEPKLSCPICMNEITEAASTVCGHIFCQPCIKAAIKAQKKCPTCRRKLTPRQ 254
>gi|119482640|ref|XP_001261348.1| peroxisome biosynthesis protein (Peroxin-10), putative [Neosartorya
fischeri NRRL 181]
gi|119409503|gb|EAW19451.1| peroxisome biosynthesis protein (Peroxin-10), putative [Neosartorya
fischeri NRRL 181]
Length = 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN 85
P +AA Y A ++ + + C +C+++ K+ +T CGH FC+ CI +R
Sbjct: 297 PLLPASAARYDLAEDSNVIPWIPSGQQSKCTLCLELYKDPSVTTCGHVFCWTCIRDWVRE 356
Query: 86 KSDCPCCGHYLTNNQLYP 103
K +CP C + +++ P
Sbjct: 357 KPECPLCRQEVIPSKVLP 374
>gi|326437562|gb|EGD83132.1| ring finger protein 1 [Salpingoeca sp. ATCC 50818]
Length = 348
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---P 103
EL M CPIC+ +I+E T C H FC CI LR+ K +CP C + ++ P
Sbjct: 30 ELVAQMKCPICLNLIEETMATECMHRFCGECIKRSLRHSKKECPTCRKPCASKRVLRRDP 89
Query: 104 NFLLDKLLK 112
NF D+L++
Sbjct: 90 NF--DELIQ 96
>gi|145491951|ref|XP_001431974.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399081|emb|CAK64576.1| unnamed protein product [Paramecium tetraurelia]
Length = 425
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 44 VGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNN 99
+ ++++ +LC IC ++ CGH+FC C++ ++ K CP C H L N
Sbjct: 10 IKTQQVNQHLLCSICREVFYNPIRATCGHTFCGTCLVRWIQMKKSCPLCRHKLERN 65
>gi|345567873|gb|EGX50775.1| hypothetical protein AOL_s00054g861 [Arthrobotrys oligospora ATCC
24927]
Length = 352
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC 92
C +C++ +K+ LT CGH FC+ CI RNK +CP C
Sbjct: 300 CTLCLENMKDPTLTPCGHMFCWTCITEWCRNKPECPLC 337
>gi|326673720|ref|XP_689262.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Danio rerio]
Length = 596
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGH----YLTNNQLYPNFLL 107
D CP+C+++ E T CGH+FC CI L + CP C Y N + P LL
Sbjct: 303 DFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKNRKYNPTVLL 362
Query: 108 DKLLKKTSARQISK 121
+++ + +Q+++
Sbjct: 363 QEIMSRLFPQQLAE 376
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 46 VSELDKDML-CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTN---NQL 101
+ E D+L CPIC+ ++ E +CGHSFC C+ L S CP C L +
Sbjct: 1 MKEWVMDLLECPICLFLMCEPMTMSCGHSFCRRCMGAFL--PSRCPTCKERLKQRDAKNI 58
Query: 102 YPNFLLDKLLKKTSARQ 118
N LL +++K +
Sbjct: 59 KNNVLLFSIIEKCCPEE 75
>gi|675507|gb|AAA62312.1| par-2 [Caenorhabditis elegans]
Length = 627
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC----GHYLTNNQLYP 103
+L ++LCP+C Q+ + CGHS+C CI H R+ C C G + + P
Sbjct: 49 DLSSELLCPLCDQLFDRPVMVTCGHSYCEPCIERHTRDTRACVICKLDVGPFAA---MIP 105
Query: 104 NFLLDKLLKK 113
+ LD +++K
Sbjct: 106 SITLDNMVRK 115
>gi|414879006|tpg|DAA56137.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 260
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 46 VSELDKD--MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQ 100
V E+ K+ + CPICM I EA T CGH FC CI ++ + CP C LT Q
Sbjct: 195 VKEVPKEPKLSCPICMNEITEAASTVCGHIFCQPCIKAAIKAQKKCPTCRRKLTPRQ 251
>gi|301781416|ref|XP_002926117.1| PREDICTED: e3 ubiquitin-protein ligase TRIM22-like [Ailuropoda
melanoleuca]
gi|281342820|gb|EFB18404.1| hypothetical protein PANDA_015737 [Ailuropoda melanoleuca]
Length = 494
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCII-------THLRNKSDCPCCGHYLTNNQL 101
+ KD+ CPIC++++ CGHSFC CI TH +S+CP C L
Sbjct: 9 IQKDVTCPICLELLTMPLSLDCGHSFCQACITAKSKESGTHKGGESNCPVCQCKYQFWNL 68
Query: 102 YPNFLLDKLLKKT 114
PN L ++KK
Sbjct: 69 RPNQPLANIVKKV 81
>gi|410981211|ref|XP_003996966.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Felis catus]
Length = 1873
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL---RNKSDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L + S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQEST 77
Query: 106 LLDKLLKK 113
+L+++
Sbjct: 78 RFSQLVEE 85
>gi|400600037|gb|EJP67728.1| DNA repair protein rad18 [Beauveria bassiana ARSEF 2860]
Length = 424
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 30 DAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDC 89
D A T ST G+S ++ + C +C K +T+C H+FC +CI L N S C
Sbjct: 4 DDVADSTDWLSTPLSGLSAVESALRCEVCKDFYKTPMITSCAHTFCSICIRRALSNDSKC 63
Query: 90 PCCGHYLTNNQLYPNFLLDKLL 111
P C +L N+ +++ +
Sbjct: 64 PLCRATDQELKLRSNWSMEQTV 85
>gi|297610528|ref|NP_001064665.2| Os10g0431000 [Oryza sativa Japonica Group]
gi|255679428|dbj|BAF26579.2| Os10g0431000, partial [Oryza sativa Japonica Group]
Length = 473
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYP 103
+ +L ++ CP+C +++K+A LT+ C SFC CI ++ NKS C C + + L P
Sbjct: 286 LGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCGATSILADDLLP 345
Query: 104 NFLLDKLLKKTSARQI-SKTASPLENFRQALQQGCGVSVKEIDSLMSL 150
N K L++T +R + + S EN G V V++++S + +
Sbjct: 346 N----KTLRETISRILEAPPTSSTENV------GSMVQVQDMESAIPV 383
>gi|392894086|ref|NP_497332.4| Protein PAR-2, isoform a [Caenorhabditis elegans]
gi|371566263|emb|CCD72048.2| Protein PAR-2, isoform a [Caenorhabditis elegans]
Length = 330
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 28 ETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS 87
E++A + + +L ++LCP+C Q+ + CGHS+C CI H R+
Sbjct: 29 ESNATTSTACINDVQQPVRRDLSSELLCPLCDQLFDRPVMVTCGHSYCEPCIERHTRDTR 88
Query: 88 DCPCC----GHYLTNNQLYPNFLLDKLLKK 113
C C G + + P+ LD +++K
Sbjct: 89 ACVICKLDVGPFAA---MIPSITLDNMVRK 115
>gi|296474544|tpg|DAA16659.1| TPA: ring finger protein 1 [Bos taurus]
Length = 382
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|195112453|ref|XP_002000787.1| GI22331 [Drosophila mojavensis]
gi|193917381|gb|EDW16248.1| GI22331 [Drosophila mojavensis]
Length = 783
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ ++ Y EHE+ A +V F TE ++L+SG
Sbjct: 74 VAWSTLDSNILATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSTEGNILISG 133
Query: 488 SDDCKV 493
S D +
Sbjct: 134 SQDGTI 139
>gi|193643594|ref|XP_001942602.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 25 APQETDAAAAYTAAASTSEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIIT 81
+PQE A +E+ VS L +++CPIC+ ++K+ T C H FC CI+T
Sbjct: 23 SPQE--------AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVT 74
Query: 82 HLRN-KSDCPCCGHYLTNNQ-LYPNFLLDKLLKK 113
LR+ +CP C L + + L P+ D L+ K
Sbjct: 75 ALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISK 108
>gi|145532411|ref|XP_001451961.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419638|emb|CAK84564.1| unnamed protein product [Paramecium tetraurelia]
Length = 1135
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLT 97
CP+C++ +++ +T C H C +C+ L N S+CP C YLT
Sbjct: 901 CPVCLEQVEDTIVTICLHFLCRLCLYGILANSSECPYCRKYLT 943
>gi|2388783|emb|CAA04797.1| DRING protein [Drosophila melanogaster]
Length = 435
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y ++E+ VS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLL 107
C H FC CI+T LR+ +CP C L + + PNF L
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDL 103
>gi|149063052|gb|EDM13375.1| tripartite motif protein 50, isoform CRA_d [Rattus norvegicus]
Length = 255
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 43 EVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIIT---HLRNKSDCPCCGHYLTNN 99
++ V EL + CPIC+++ KE + CGHS+C C+ + HL ++ CP C + +
Sbjct: 4 QLTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCS 63
Query: 100 QLYPNFLLDKLL 111
PN L +++
Sbjct: 64 SSPPNVSLARVI 75
>gi|17137804|ref|NP_477509.1| Sex combs extra [Drosophila melanogaster]
gi|50401702|sp|Q9VB08.1|RING1_DROME RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=Sex
comb extra protein; AltName: Full=dRING protein;
AltName: Full=dRING1
gi|7301619|gb|AAF56737.1| Sex combs extra [Drosophila melanogaster]
gi|16197987|gb|AAL13764.1| LD23953p [Drosophila melanogaster]
gi|220944852|gb|ACL84969.1| Sce-PA [synthetic construct]
gi|220952512|gb|ACL88799.1| Sce-PA [synthetic construct]
Length = 435
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y ++E+ VS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLL 107
C H FC CI+T LR+ +CP C L + + PNF L
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDL 103
>gi|226958428|ref|NP_033092.3| E3 ubiquitin-protein ligase RING1 [Mus musculus]
gi|92090635|sp|O35730.2|RING1_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Transcription repressor
Ring1A
gi|74192043|dbj|BAE32956.1| unnamed protein product [Mus musculus]
Length = 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|358338769|dbj|GAA31345.2| E3 ubiquitin-protein ligase RNF1/2 [Clonorchis sinensis]
Length = 388
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ I+K T C H FC CI+T LR+ + +CP C L
Sbjct: 28 TEIAVSPRSLKSELMCPICLDILKGTMTTKECLHRFCAECIVTALRSGNKECPTCRKKLV 87
Query: 98 NNQLY---PNFLLDKLLKK 113
+ + PNF D L+ K
Sbjct: 88 SKRSLRRDPNF--DALIAK 104
>gi|195574396|ref|XP_002105175.1| GD18065 [Drosophila simulans]
gi|194201102|gb|EDX14678.1| GD18065 [Drosophila simulans]
Length = 436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y ++E+ VS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLLDKLLKK 113
C H FC CI+T LR+ +CP C L + + PNF D L+ K
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNF--DLLISK 107
>gi|195352923|ref|XP_002042960.1| GM16329 [Drosophila sechellia]
gi|194127025|gb|EDW49068.1| GM16329 [Drosophila sechellia]
Length = 434
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y ++E+ VS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLLDKLLKK 113
C H FC CI+T LR+ +CP C L + + PNF D L+ K
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNF--DLLISK 107
>gi|40747978|gb|AAR89523.1| breast cancer 1 [Tetraodon nigroviridis]
Length = 1267
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL----RNKSDCPCCGHYLTNNQL 101
+S L + + CPIC+ ++ E T C H FC C++ L +NK++CP C +T L
Sbjct: 13 ISLLWETLQCPICLDLMSEPVSTKCDHQFCRFCMLKLLSNTKQNKANCPVCKSKITKRSL 72
Query: 102 Y--PNF 105
P F
Sbjct: 73 QESPGF 78
>gi|357509977|ref|XP_003625277.1| RING finger protein [Medicago truncatula]
gi|355500292|gb|AES81495.1| RING finger protein [Medicago truncatula]
Length = 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 55 CPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD---CPCCGHYLTNNQLYPNFLLD--- 108
C IC+ + KE LT CGH FC+ C+ L SD CP C +T + P +
Sbjct: 172 CNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKGEVTIKSVTPIYGRGNST 231
Query: 109 KLLKKTSARQIS--KTASPLENFRQALQQGC-GVSVKE--------IDSLMSLLSEKKRK 157
++L++ S +I A +E+ RQ LQ+ V+E ID L + +
Sbjct: 232 RVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFPVEEMIRRLGNRIDLARDLSQPNEPE 291
Query: 158 MEQEEAERNMQILLDFL 174
+ AER +L FL
Sbjct: 292 NARGTAERTTSLLSRFL 308
>gi|301789367|ref|XP_002930103.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Ailuropoda melanoleuca]
Length = 763
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL---RNKSDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L + S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNNITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|194907249|ref|XP_001981516.1| GG12099 [Drosophila erecta]
gi|190656154|gb|EDV53386.1| GG12099 [Drosophila erecta]
Length = 435
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y ++E+ VS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLL 107
C H FC CI+T LR+ +CP C L + + PNF L
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDL 103
>gi|195503706|ref|XP_002098764.1| GE10548 [Drosophila yakuba]
gi|194184865|gb|EDW98476.1| GE10548 [Drosophila yakuba]
Length = 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 20 SSTDTAPQETDAAAAYT-------AAASTSEVGVSE--LDKDMLCPICMQIIKEAFLTA- 69
+S D AP +T + Y ++E+ VS L +++CPIC+ ++K+ T
Sbjct: 2 TSLDPAPNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 61
Query: 70 CGHSFCYMCIITHLRN-KSDCPCCGHYLTNNQLY---PNFLLDKLLKK 113
C H FC CI+T LR+ +CP C L + + PNF D L+ K
Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNF--DLLISK 107
>gi|426250134|ref|XP_004018793.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ovis aries]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|351697543|gb|EHB00462.1| Ligand of Numb protein X 2 [Heterocephalus glaber]
Length = 692
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 44 EVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 86
>gi|432096342|gb|ELK27100.1| Tripartite motif-containing protein 5 [Myotis davidii]
Length = 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 37 AAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN------KSDCP 90
AA + V + K++ CPIC++++ E CGH+FC CI H R +S CP
Sbjct: 2 GAAVMASGIVVNMKKEVTCPICLELLTEPMSLDCGHTFCQACITAHNRESMICQRESSCP 61
Query: 91 CCGHYLTNNQLYPN 104
C + PN
Sbjct: 62 VCRSTYQPENMRPN 75
>gi|348583385|ref|XP_003477453.1| PREDICTED: ligand of Numb protein X 2-like [Cavia porcellus]
Length = 691
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
E+D D++C IC+Q + + T CGH+FCY C+ L+ K CP
Sbjct: 43 EVDDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>gi|145483781|ref|XP_001427913.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394996|emb|CAK60515.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 52 DMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHY 95
+ +C IC QI + T CGH+FC CI ++ K CPCC +
Sbjct: 14 EFICSICFQIFTKPIKTTCGHNFCIKCITKWVQKKKHCPCCRKW 57
>gi|334323602|ref|XP_003340414.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING1-like [Monodelphis domestica]
Length = 408
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|327290713|ref|XP_003230066.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Anolis
carolinensis]
Length = 331
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKHTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|212532413|ref|XP_002146363.1| peroxisome biosynthesis protein (Peroxin-10), putative [Talaromyces
marneffei ATCC 18224]
gi|210071727|gb|EEA25816.1| peroxisome biosynthesis protein (Peroxin-10), putative [Talaromyces
marneffei ATCC 18224]
Length = 382
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN 85
P T A A Y A + + + C +C++ K+ +T CGH FC+ CI +R
Sbjct: 302 PTLTAAMARYDLAENPQAISWIPEGQHQKCTLCLEPFKDPSVTTCGHVFCWTCIRDWVRE 361
Query: 86 KSDCPCCGHYLTNNQLYP 103
K +CP C +++ P
Sbjct: 362 KPECPLCRQEALPSKILP 379
>gi|74194871|dbj|BAE26023.1| unnamed protein product [Mus musculus]
Length = 690
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|334331660|ref|XP_001373850.2| PREDICTED: e3 ubiquitin ligase RNF4-like [Monodelphis domestica]
Length = 192
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 55 CPICM----QIIKEAFL---TACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFL 106
CPICM +I++ L T CGH FC C+ LRN S CP C L Q +P ++
Sbjct: 134 CPICMDGYSEILQSGRLIVSTKCGHVFCSQCLRDALRNASSCPTCRKKLNQKQYHPIYI 192
>gi|355568736|gb|EHH25017.1| hypothetical protein EGK_08769 [Macaca mulatta]
Length = 1644
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLT 97
++ + K + CPIC+++IKE T C H FC C++ L K S CP C + +T
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDIT 69
>gi|353237871|emb|CCA69833.1| related to UVS-2 DNA repair protein UVS-2 [Piriformospora indica
DSM 11827]
Length = 363
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-NKSDCPCCGHYLTNNQLYPNFL 106
+LD + C IC +I +T C HSFC +CI L CP C +T+ QL N +
Sbjct: 22 KLDSSLRCSICKDLITSPMITPCSHSFCSLCIRESLTVAAGKCPVCQTTVTDGQLKRNTM 81
Query: 107 LDKL 110
L ++
Sbjct: 82 LSEI 85
>gi|213407964|ref|XP_002174753.1| RING finger domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212002800|gb|EEB08460.1| RING finger domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 31 AAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
A A A T E + + CP+C + + + T CGH++CY C+ ++ CP
Sbjct: 60 AETAEVATKPTFEDVAGAVRSSLTCPVCTETFFKPYTTHCGHTYCYRCLDAWIKTSRTCP 119
Query: 91 CCGHYLTNNQLYPNFLLDKLLKKTS 115
C L + P ++++ L+ + S
Sbjct: 120 SCRQKLYLEPV-PAYIVNDLISRLS 143
>gi|157280011|ref|NP_001098521.1| E3 ubiquitin-protein ligase RING1 [Bos taurus]
gi|154426104|gb|AAI51292.1| RING1 protein [Bos taurus]
Length = 407
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|148222454|ref|NP_001090794.1| ring finger protein 1 [Xenopus (Silurana) tropicalis]
gi|134025969|gb|AAI35192.1| ring1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|79158712|gb|AAI08122.1| TRIM22 protein [Bos taurus]
Length = 383
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 19 PSSTDTAPQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMC 78
P++ T A A A TS V V ++ ++ CPIC++++ E CGHSFC C
Sbjct: 25 PNTRSTLEVRAGQAEARKVATMTSAVLV-DIQDEVTCPICLELLTEPLSIDCGHSFCQAC 83
Query: 79 I-------ITHLRNKSDCPCC--GHYLTNNQLYPN 104
I + +S CP C ++L N L PN
Sbjct: 84 ITADNKESMPGQEGQSRCPVCQTSYWLGN--LRPN 116
>gi|380793389|gb|AFE68570.1| E3 ubiquitin-protein ligase RING1, partial [Macaca mulatta]
Length = 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|242019424|ref|XP_002430161.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
gi|212515252|gb|EEB17423.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
Length = 352
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C L
Sbjct: 34 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 93
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 94 SKRSLRPDPNFDLLISK 110
>gi|390350599|ref|XP_001188292.2| PREDICTED: uncharacterized protein LOC755086 [Strongylocentrotus
purpuratus]
Length = 2640
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 41 TSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYL 96
T +G+ + K++ C IC+ ++++ T C H FC C++ L++ S CP C +
Sbjct: 10 TDSIGL--MQKNLECSICLDLLQDPVSTKCDHQFCNFCVLALLQSSSKPSARCPLCKIVI 67
Query: 97 TNNQLYPNFLLDKLLK 112
T L N LD ++K
Sbjct: 68 TKRSLTKNEQLDGIVK 83
>gi|126291341|ref|XP_001379478.1| PREDICTED: gem-associated protein 5 [Monodelphis domestica]
Length = 1511
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS------KLSCLSWNKFSKNRIAS 443
L A+ + I V + SV+ + + E P R+ K++ L+W+ R+ S
Sbjct: 592 LIASGSNNAVIYVHNLKSVIESAPESPVTITE-PFRTLSGHTAKITSLAWSPHHDGRLVS 650
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ Y+G VWDV ++ + Y H R V +S +P + SG+DD
Sbjct: 651 ACYDGTAQVWDVLREEPLCNYRGHRGRLLCVQWSPLDPDSVFSGADD 697
>gi|6572993|gb|AAF17506.1|AF196346_1 Ring finger protein 1b [Danio rerio]
Length = 259
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 37 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 96
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 97 KRSLRPDPNFDALISK 112
>gi|348571846|ref|XP_003471706.1| PREDICTED: E3 ubiquitin-protein ligase LNX isoform 1 [Cavia
porcellus]
Length = 724
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCP 90
V+E+D D++C IC+Q E T CGH++C +C+ L K CP
Sbjct: 36 VAEVDDDLICHICLQAFLEPLDTPCGHTYCSLCLTNFLVEKDFCP 80
>gi|118572616|sp|Q02084.2|A33_PLEWA RecName: Full=Zinc-binding protein A33
gi|113413605|gb|AAA49614.2| Zn-binding protein [Pleurodeles waltl]
Length = 625
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS--DCPCCGHYLTNNQLYPNFLLDKL 110
+ CP+C + KE + CGH+FC CI + S CP C LT + N +L L
Sbjct: 161 LTCPLCRSLFKEPVILECGHNFCKHCIDKSWESASAFSCPECKEVLTERKYTTNRVLANL 220
Query: 111 LKKTSARQISKTASPLE 127
+KK + K P E
Sbjct: 221 VKKAAVGVKDKDVKPKE 237
>gi|409039285|gb|EKM48929.1| hypothetical protein PHACADRAFT_107936, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 333
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 380 SSIEFDRDDQLFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRSK-LSCLSWNKFSK 438
SSI F D Q T +S+ ++ + + + A P+ E S + C++ FS
Sbjct: 181 SSIMFSLDGQYLLTGNISQAGNSQEYPTCLWDIATGE-PIREFWGHSGYIRCIA---FSL 236
Query: 439 N--RIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSM--LVSGSDDCKVL 494
N RI++ + V VWDV T S+ ++EH WSV FS PS LVSG DC+VL
Sbjct: 237 NGRRISTGSDDMTVIVWDVATGTSLATFKEHNAPVWSVTFS---PSGDHLVSGGVDCRVL 293
>gi|403353451|gb|EJY76262.1| RING finger and SPRY domain-containing protein [Oxytricha trifallax]
Length = 1378
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG 93
T+ G E D++ LC IC K CGH C+ CI H++N CP C
Sbjct: 1314 TGTATGGQDEFDEEKLCNICYFTEKNTTFVPCGHQTCFQCIQVHMQNSEKCPFCN 1368
>gi|392587859|gb|EIW77192.1| hypothetical protein CONPUDRAFT_168183 [Coniophora puteana
RWD-64-598 SS2]
Length = 1263
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 31/143 (21%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR----------------NKSDCPCC 92
+D DM CPIC +A +TAC HSFC C++ L N+ CP C
Sbjct: 868 IDADMECPICTDTFTDAVVTACSHSFCRECLVDILNRPLAQGNDDSGPKYKSNERPCPTC 927
Query: 93 GHYLTNNQLYPNFLL---DKLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMS 149
++ ++++ ++ L T+AR S + ++ S +EI+ ++S
Sbjct: 928 CSPVSGDKIFSREAFEPSEEELNGTAARSSSPIPAEVD------------SDEEIEGILS 975
Query: 150 LLSEKKRKMEQEEAERNMQILLD 172
+ S R+ + A+R D
Sbjct: 976 VPSRNIRRSSRGNAKRRASYAYD 998
>gi|61740517|ref|NP_001013434.1| breast cancer type 1 susceptibility protein homolog [Canis lupus
familiaris]
gi|2501720|sp|Q95153.1|BRCA1_CANFA RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|1620568|gb|AAC48663.1| similar to the human breast and ovarian cancer susceptibility gene
BRCA1 product [Canis lupus familiaris]
Length = 1878
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHL---RNKSDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L + S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|47215614|emb|CAG11645.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 39 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 98
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 99 KRSLRPDPNFDALISK 114
>gi|380028079|ref|XP_003697739.1| PREDICTED: uncharacterized protein LOC100867025 [Apis florea]
Length = 1744
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 34 AYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD-CPCC 92
++ A S+V + + K + C IC+QII + T CGH FC +CI ++NK+ CP C
Sbjct: 4 VFSVAGKLSKV-IKNMQKCLQCTICLQIISDPVKTHCGHRFCRICIQPVIQNKNALCPLC 62
Query: 93 G 93
Sbjct: 63 N 63
>gi|223994027|ref|XP_002286697.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978012|gb|EED96338.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 624
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCG 93
+LCP+C I+KEA CGHSFC+ CI + N CP G
Sbjct: 23 LLCPLCNTIMKEASTLECGHSFCHDCIQGYTCNSWTCPVVG 63
>gi|402766203|ref|NP_997714.2| E3 ubiquitin-protein ligase RING1 [Rattus norvegicus]
gi|90110054|sp|Q6MGB6.2|RING1_RAT RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|149043381|gb|EDL96832.1| ring finger protein 1 [Rattus norvegicus]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|448099149|ref|XP_004199075.1| Piso0_002480 [Millerozyma farinosa CBS 7064]
gi|359380497|emb|CCE82738.1| Piso0_002480 [Millerozyma farinosa CBS 7064]
Length = 474
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 45 GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPN 104
G+ ELD C IC + +K +T+C H+FC CI +L + + CP C + L
Sbjct: 26 GLRELDSLQRCYICKEFLKAPVMTSCNHTFCSQCIREYLLSNTHCPLCKSEQLESNLKKV 85
Query: 105 FLLDKLL 111
LL++L+
Sbjct: 86 ILLEELV 92
>gi|356563334|ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808703 [Glycine max]
Length = 849
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 PQETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTA--CGHSFCYMCIITHL 83
P E ST VG EL ++ CP+C ++K+A LT+ C SFC CI ++
Sbjct: 266 PNEAAFEKEIEGMPSTRSVG--ELPPELRCPLCNDVMKDAVLTSKCCFKSFCDRCIRDYI 323
Query: 84 RNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSARQISKTASPLENFRQALQ 134
+KS C C + + L PN K L+ T R + S EN Q
Sbjct: 324 ISKSICVCGATNILADDLLPN----KTLRDTINRILESGNSSAENAGSTFQ 370
>gi|338711849|ref|XP_001492138.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Equus caballus]
Length = 755
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 LLDKLLKK 113
+L+++
Sbjct: 78 RFSQLVEE 85
>gi|426238123|ref|XP_004013007.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Ovis aries]
Length = 763
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|1040961|gb|AAB17113.1| human BRCA1 homolog; Method: conceptual translation supplied by
author [Mus musculus]
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|348504524|ref|XP_003439811.1| PREDICTED: E3 ubiquitin-protein ligase LNX [Oreochromis niloticus]
Length = 763
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLY-PNFL 106
E+D D++C IC+Q + + T CGH++C C+ + L CP C L P+ L
Sbjct: 44 EVDDDLVCHICLQPLIKPLDTPCGHTYCQECLTSFLLESDFCPVCREPLMLQTCRKPSLL 103
Query: 107 LDKLLKKTSA 116
+ KLL+K +
Sbjct: 104 VHKLLEKLTV 113
>gi|312385940|gb|EFR30327.1| hypothetical protein AND_00141 [Anopheles darlingi]
Length = 348
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD++ Q+ + Y EHE+ A SV F TE ++L+SG
Sbjct: 16 VAWSALDSNILATAATNGVVSVWDLSKFGRQKQSLVYNEHERTAHSVAFHGTEANLLISG 75
Query: 488 SDDCKV 493
S D +
Sbjct: 76 SQDGTI 81
>gi|341877600|gb|EGT33535.1| hypothetical protein CAEBREN_20300 [Caenorhabditis brenneri]
Length = 158
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 50 DKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCC----GHYLTNNQL 101
D+D C +C+ E + CGHSFC++CI +HL CP C G + N QL
Sbjct: 3 DEDFCCAVCLDFFIEPCIIECGHSFCHLCIASHLNINEKCPLCRAHTGKPIRNRQL 58
>gi|161016835|ref|NP_033894.3| breast cancer type 1 susceptibility protein homolog [Mus musculus]
gi|408360314|sp|P48754.3|BRCA1_MOUSE RecName: Full=Breast cancer type 1 susceptibility protein homolog
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|119655545|gb|ABL86143.1| BRCA1 [Strongylocentrotus purpuratus]
Length = 2641
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 41 TSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSD----CPCCGHYL 96
T +G+ + K++ C IC+ ++++ T C H FC C++ L++ S CP C +
Sbjct: 10 TDSIGL--MQKNLECSICLDLLQDPVSTKCDHQFCNFCVLALLQSSSKPSARCPLCKIVI 67
Query: 97 TNNQLYPNFLLDKLLK 112
T L N LD ++K
Sbjct: 68 TKRSLTKNEQLDGIVK 83
>gi|46329772|gb|AAH68303.1| Breast cancer 1 [Mus musculus]
Length = 1811
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|1049263|gb|AAC52323.1| breast and ovarian cancer susceptibility protein [Mus musculus]
gi|1585892|prf||2202221A Brca1 gene
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|988214|gb|AAB17114.1| breast/ovarian cancer susceptibility homolog [Mus musculus]
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|4097808|gb|AAD00168.1| Brca1 [Mus musculus]
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|61966933|ref|NP_001013637.1| tripartite motif-containing protein 6 [Mus musculus]
gi|56404886|sp|Q8BGE7.1|TRIM6_MOUSE RecName: Full=Tripartite motif-containing protein 6
gi|26329057|dbj|BAC28267.1| unnamed protein product [Mus musculus]
gi|26339932|dbj|BAC33629.1| unnamed protein product [Mus musculus]
gi|187951281|gb|AAI38966.1| Tripartite motif-containing 6 [Mus musculus]
Length = 488
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 41 TSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRN-------KSDCPCCG 93
TS V V ++ ++ CPIC++++ E CGHSFC +CII + N +S CP C
Sbjct: 2 TSTVLV-DIRDEVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCR 60
Query: 94 HYLTNNQLYPNFLLDKLLKK 113
L PN L ++K+
Sbjct: 61 TSYQPGNLRPNRHLAAIVKR 80
>gi|148702106|gb|EDL34053.1| breast cancer 1 [Mus musculus]
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|157820501|ref|NP_001101224.1| TNF receptor-associated factor 6 [Rattus norvegicus]
gi|288559149|sp|B5DF45.1|TRAF6_RAT RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|149022731|gb|EDL79625.1| Tnf receptor-associated factor 6 (predicted) [Rattus norvegicus]
gi|197246608|gb|AAI68921.1| Tnf receptor-associated factor 6 [Rattus norvegicus]
Length = 530
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI +R+ CP L NQL+P NF
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQLFPDNFA 123
Query: 107 LDKLLKKT 114
++L T
Sbjct: 124 KREILSLT 131
>gi|969172|gb|AAA96393.1| breast/ovarian cancer susceptibility protein homolog [Mus musculus]
Length = 1812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQL 101
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>gi|46403229|gb|AAS92634.1| ring finger protein 2 [Danio rerio]
Length = 338
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 43 EVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLTN 98
E+ VS L +++CPIC+ ++K T C H FC CIIT LR+ + +CP C L +
Sbjct: 39 EIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 98
Query: 99 NQ-LYPNFLLDKLLKK 113
+ L P+ D L+ K
Sbjct: 99 KRSLRPDPNFDALISK 114
>gi|403261548|ref|XP_003923180.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|194375029|dbj|BAG62627.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|195158871|ref|XP_002020308.1| GL13576 [Drosophila persimilis]
gi|198449924|ref|XP_001357776.2| GA20478 [Drosophila pseudoobscura pseudoobscura]
gi|194117077|gb|EDW39120.1| GL13576 [Drosophila persimilis]
gi|198130817|gb|EAL26911.2| GA20478 [Drosophila pseudoobscura pseudoobscura]
Length = 772
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 431 LSWNKFSKNRIASSDYEGIVTVWDVTT---QQSVMEYEEHEKRAWSVDFSRTEPSMLVSG 487
++W+ N +A++ G+V+VWD + Q+ ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 65 VAWSTMDCNLLATAATNGVVSVWDHSKCGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 124
Query: 488 SDDCKV 493
S D +
Sbjct: 125 SQDGTI 130
>gi|51479192|ref|NP_002922.2| E3 ubiquitin-protein ligase RING1 [Homo sapiens]
gi|90110053|sp|Q06587.2|RING1_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Really interesting new
gene 1 protein
gi|30354168|gb|AAH51866.1| Ring finger protein 1 [Homo sapiens]
gi|33877354|gb|AAH02922.2| Ring finger protein 1 [Homo sapiens]
gi|66347232|emb|CAI95620.1| ring finger protein 1 [Homo sapiens]
gi|158259733|dbj|BAF82044.1| unnamed protein product [Homo sapiens]
gi|208967344|dbj|BAG73686.1| ring finger protein 1 [synthetic construct]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|2239144|emb|CAA73381.1| transcription repressor Ring1A [Mus musculus]
gi|3811385|gb|AAC69901.1| RING1 [Mus musculus]
gi|148678290|gb|EDL10237.1| mCG23002 [Mus musculus]
Length = 377
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 4 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 63
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 64 SKRSLRPDPNFDALISK 80
>gi|397474342|ref|XP_003808641.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
[Pan paniscus]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|395832135|ref|XP_003789131.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Otolemur garnettii]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|355561586|gb|EHH18218.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|332245586|ref|XP_003271939.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Nomascus
leucogenys]
gi|402866635|ref|XP_003897484.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Papio anubis]
gi|426352705|ref|XP_004043850.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Gorilla gorilla
gorilla]
gi|387542564|gb|AFJ71909.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|410207298|gb|JAA00868.1| ring finger protein 1 [Pan troglodytes]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|335297607|ref|XP_003358078.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Sus scrofa]
Length = 759
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK---SDCPCCGHYLTNNQLYPNF 105
+ K + CPIC+++IKE T C H FC C++ L K S CP C + +T L +
Sbjct: 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQEST 77
Query: 106 ----LLDKLLK 112
L+++LLK
Sbjct: 78 RFSQLVEELLK 88
>gi|297661281|ref|XP_002809193.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Pongo
abelii]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|289741557|gb|ADD19526.1| putative E3 ubiquitin ligase [Glossina morsitans morsitans]
Length = 415
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 42 SEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K+ T C H FC CIIT LR+ + +CP C L
Sbjct: 31 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLV 90
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 91 SKRSLRPDPNFDLLISK 107
>gi|432094621|gb|ELK26127.1| E3 ubiquitin-protein ligase RING1 [Myotis davidii]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|431916878|gb|ELK16638.1| E3 ubiquitin-protein ligase RING1 [Pteropus alecto]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|426367164|ref|XP_004050604.1| PREDICTED: tripartite motif-containing protein 6 isoform 1 [Gorilla
gorilla gorilla]
Length = 516
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR------- 84
A A A TS V V ++ +++ CPIC++++ E CGHSFC CI + R
Sbjct: 21 AGARRVATMTSPVLV-DIREEVTCPICLELLTEPLSIDCGHSFCQACITPNSRESVIGQE 79
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKK 113
+ CP C L PN L ++++
Sbjct: 80 GERSCPVCQTSYQPGNLRPNRHLANIVRR 108
>gi|417400362|gb|JAA47134.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|410958904|ref|XP_003986053.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Felis catus]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|354487574|ref|XP_003505947.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cricetulus
griseus]
gi|344252993|gb|EGW09097.1| E3 ubiquitin-protein ligase RING1 [Cricetulus griseus]
Length = 408
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|213402625|ref|XP_002172085.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Schizosaccharomyces japonicus yFS275]
gi|212000132|gb|EEB05792.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Schizosaccharomyces japonicus yFS275]
Length = 426
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 53 MLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLDKLLK 112
+ CPIC +T+C HSFC CI +L++ S CP C ++L N ++++L++
Sbjct: 26 LRCPICHDFFSGPLITSCCHSFCSYCIRCYLKDHSICPICRSEQQESRLRKNLVVEELVE 85
>gi|164658864|ref|XP_001730557.1| hypothetical protein MGL_2353 [Malassezia globosa CBS 7966]
gi|159104453|gb|EDP43343.1| hypothetical protein MGL_2353 [Malassezia globosa CBS 7966]
Length = 613
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 50 DKDMLCPICMQIIKEAFLTACGH-SFCYMCIITHL-RNKSDCPCCGHYLTNNQLYPNFLL 107
D + CP+C +++++A T+C H SFC C+ THL + CP C + + ++ +
Sbjct: 314 DPALACPLCSKLVRDAVKTSCCHTSFCEECVQTHLFEHDFVCPECEKRIPDIEM---LKI 370
Query: 108 DKLLKKTSARQISKTASPLENFRQALQQGCGV 139
D +L+K + KT + +A +QG GV
Sbjct: 371 DDVLRKLVREYVEKT---IARSEEAFEQGTGV 399
>gi|344298828|ref|XP_003421093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Loxodonta
africana]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|403217433|emb|CCK71927.1| hypothetical protein KNAG_0I01380 [Kazachstania naganishii CBS 8797]
Length = 1493
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 48 ELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNF 105
E +K C IC+ II + CGH FC CI + L+N+ CP C T+ +LY NF
Sbjct: 1170 ESEKVFNCSICLGIIHHGSIMKCGHFFCRDCIHSWLKNQRTCPICKREATSTELY-NF 1226
>gi|301757099|ref|XP_002914380.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Ailuropoda
melanoleuca]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|296197865|ref|XP_002746470.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Callithrix
jacchus]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|194223403|ref|XP_001493432.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Equus caballus]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|298160989|ref|NP_001177164.1| E3 ubiquitin-protein ligase RING1 [Sus scrofa]
gi|147223291|emb|CAN13293.1| ring finger protein 1 [Sus scrofa]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|348575155|ref|XP_003473355.1| PREDICTED: gem-associated protein 5-like [Cavia porcellus]
Length = 1507
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 390 LFATAGVSRRIKVFDFASVVNEPADVHCPVVEMPTRS------KLSCLSWNKFSKNRIAS 443
L A+ + I V + +V+ ++ + E P R+ K++CL+W+ + S
Sbjct: 598 LLASGSNNAVIYVHNLKTVLESSSESPVTITE-PFRTLSGHTAKITCLAWSPHHDGILVS 656
Query: 444 SDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 490
+ Y+G VWD +Q + + H R V +S EP + SG+DD
Sbjct: 657 ASYDGTAQVWDTLREQPLHNFRGHRGRLLCVVWSPLEPECIYSGADD 703
>gi|255950046|ref|XP_002565790.1| Pc22g18870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592807|emb|CAP99175.1| Pc22g18870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 622
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 26 PQETDAAAAYTAAASTSEV------GVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCI 79
PQ+ + AA + A S + V ++ + C IC++ + E F ACGH+FCY C+
Sbjct: 102 PQKVEMAARNGSGAEASGLVNTLQGHVDDIRTLIQCGICIRPLYEPFTIACGHTFCYSCL 161
Query: 80 ITHL---RNKSDCPCCGHYLTNNQLYPNFLLDKLLKKTSAR 117
+ R+K CP C NQ P +L+ +++ + R
Sbjct: 162 SSWFAGGRSKRTCPDC-RAPVKNQPAPAYLVRAVVQMFTGR 201
>gi|327259747|ref|XP_003214697.1| PREDICTED: TNF receptor-associated factor 6-like [Anolis
carolinensis]
Length = 548
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 49 LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS-DCPCCGHYLTNNQLYP-NFL 106
L+ CPIC+ ++EA T CGH FC CI+ +R+ CP L QL+P NF
Sbjct: 67 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLETQLFPDNFA 126
Query: 107 LDKLLKKT 114
++L T
Sbjct: 127 KREILSLT 134
>gi|449474913|ref|XP_002195040.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Taeniopygia guttata]
Length = 525
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 27 QETDAAAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNK 86
+E AAA T + VS+L+ C +C+++ E T CGH+FC C+ L ++
Sbjct: 196 KEETAAAKCTQPCLGESLSVSDLE----CSLCIRMFFEPVTTPCGHTFCKECLERCLDHR 251
Query: 87 SDCPCCGH----YLTNNQLYPNFLLDKLLKKTSARQISK 121
+CP C YL + P LL ++ T Q+++
Sbjct: 252 PNCPLCKQSLREYLKAGRYSPTVLLQDIMLATFPTQLAE 290
>gi|1770499|emb|CAA69165.1| put. ring protein [Homo sapiens]
Length = 236
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 46 VSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKS----DCPCCGHYLTNNQL 101
V++L ++++CPIC+ I+++ CGH+FC C IT + S CP C + + +
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCPQC-ITQIGETSCGFFKCPLCKTSVRRDAI 65
Query: 102 YPNFLLDKLLKKTSARQISKTAS 124
N LL L++K A Q S+ S
Sbjct: 66 RFNSLLRNLVEKIQALQASEVQS 88
>gi|344309421|ref|XP_003423375.1| PREDICTED: tripartite motif-containing protein 5-like [Loxodonta
africana]
Length = 562
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 39 ASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR-------NKSDCPC 91
S + V +L +++ CPIC+++++E CGHSFC CI + + +S CP
Sbjct: 35 VSMASAIVVKLQEEVTCPICLELLREPLSLDCGHSFCQACITVNSKTSMVSSEGESTCPM 94
Query: 92 CGHYLTNNQLYPNFLLDKLLKKTSARQIS 120
C + L PN L +++K ++S
Sbjct: 95 CRIKYQADNLRPNQHLANIVEKLREVKVS 123
>gi|355716581|gb|AES05657.1| ring finger protein 1 [Mustela putorius furo]
Length = 348
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 8 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 67
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 68 SKRSLRPDPNFDALISK 84
>gi|343961437|dbj|BAK62308.1| tripartite motif-containing protein 6 [Pan troglodytes]
gi|410220488|gb|JAA07463.1| tripartite motif containing 6 [Pan troglodytes]
gi|410307690|gb|JAA32445.1| tripartite motif containing 6 [Pan troglodytes]
Length = 516
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 32 AAAYTAAASTSEVGVSELDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLR------- 84
A A A TS V V ++ +++ CPIC++++ E CGHSFC CI + R
Sbjct: 21 AGARRVATMTSPVLV-DIREEVTCPICLELLTEPLSIDCGHSFCQACITPNSRESVIGQE 79
Query: 85 NKSDCPCCGHYLTNNQLYPNFLLDKLLKK 113
+ CP C L PN L ++++
Sbjct: 80 GERSCPVCQTSYQPGNLRPNRHLANIVRR 108
>gi|90101656|sp|Q7ZWM8.2|RNG2B_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-B; AltName:
Full=RING finger protein 1B-B; Short=RING1b-B; AltName:
Full=RING finger protein 2-B
Length = 343
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 32 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 91
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 92 SKRSLRPDPNFDALISK 108
>gi|114326401|ref|NP_001041593.1| E3 ubiquitin-protein ligase RING1 [Canis lupus familiaris]
gi|90110052|sp|Q5TJF3.2|RING1_CANFA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=RING1a
gi|55956947|emb|CAI11434.1| ring finger protein 1 [Canis lupus familiaris]
Length = 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|281338470|gb|EFB14054.1| hypothetical protein PANDA_002277 [Ailuropoda melanoleuca]
Length = 404
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVSE--LDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|147899469|ref|NP_001087647.1| E3 ubiquitin-protein ligase RING2-A [Xenopus laevis]
gi|62900962|sp|Q66J69.1|RNG2A_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-A; AltName:
Full=RING finger protein 1B-A; Short=RING1b-A; AltName:
Full=RING finger protein 2-A
gi|51704098|gb|AAH81039.1| MGC81738 protein [Xenopus laevis]
Length = 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 42 SEVGVS--ELDKDMLCPICMQIIKEAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGHYLT 97
+E+ VS L +++CPIC+ ++K T C H FC CI+T LR+ + +CP C L
Sbjct: 33 TEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLV 92
Query: 98 NNQ-LYPNFLLDKLLKK 113
+ + L P+ D L+ K
Sbjct: 93 SKRSLRPDPNFDALISK 109
>gi|344228310|gb|EGV60196.1| WD40 repeat-like protein [Candida tenuis ATCC 10573]
Length = 777
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 385 DRDDQLFATAGVSRRIKVFDF-ASVVNEPADVHCPVVEMPTRSKLSCLSWNKFSKN-RIA 442
D LFA G I V+D V H ++ S L C N SKN ++A
Sbjct: 107 DSTSSLFAFGGTDGVITVWDIEGGYVTHSLKGHGSII-----SSL-CFYGNLNSKNWKLA 160
Query: 443 SSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVLY 495
S D +G+V +WD+T +++ ++EH + F+++ L G D+ VLY
Sbjct: 161 SGDTQGVVKIWDLTNRKNTHTFKEHASAVRGLSFTKSGQYFLSGGRDEIVVLY 213
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.129 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,234,149,886
Number of Sequences: 23463169
Number of extensions: 285020689
Number of successful extensions: 1174110
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5023
Number of HSP's successfully gapped in prelim test: 7271
Number of HSP's that attempted gapping in prelim test: 1160120
Number of HSP's gapped (non-prelim): 18695
length of query: 495
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 348
effective length of database: 8,910,109,524
effective search space: 3100718114352
effective search space used: 3100718114352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)